BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014254
(428 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/277 (66%), Positives = 217/277 (78%), Gaps = 4/277 (1%)
Query: 125 RLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQ 184
R V Q+ LPD VD+ QR SVL PS++ISY S RPLS+ ++R++TLD +T QQ
Sbjct: 238 RPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQ 297
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
EV F+ILCSND+VG VIGKGGTI++ALQ+EAGA ISVGA + ECDERLIT+TASE PESR
Sbjct: 298 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESR 357
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
YSPAQ V+LVF+R IE EKGLD S +KG V+ARLVV SNQVGCL+GKGGTIISEMR
Sbjct: 358 YSPAQNGVILVFNRSIEAGIEKGLD-SGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMR 416
Query: 305 KVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF-SGTLNTAR 362
K +G IRII SDQ+ KC SEND+VVQISGEF V+D +Y++TGRLRDN F S TLN A
Sbjct: 417 KASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAG 476
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQ 399
RS SS + E SPY R++DPASFG+HSSV VS FS+
Sbjct: 477 IRS-SSAMNEISPYGRVRDPASFGLHSSVGVSPSFSR 512
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 20/209 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA-------- 237
V+FR+LC ++G VIGK G I++ LQS+ GA I V + D R+I V A
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 238 ---SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
E S AQ+AV+ VF R++E + + G +V+ RL+ ++QVG ++G
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAA---VVDGVPPGGVVSCRLLAETSQVGSVIG 167
Query: 295 KGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
KGG ++ ++R+ +G+ I+++ +++L C + D +V+I G+ VK A+ V+ RL+D
Sbjct: 168 KGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQD-- 225
Query: 354 FSGTLNTARTRSTSSVLTETSPYSRLKDP 382
N +T+ E P L DP
Sbjct: 226 ---CPNVDKTKLIGGRPLEVVPQQSLPDP 251
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 183/277 (66%), Positives = 217/277 (78%), Gaps = 4/277 (1%)
Query: 125 RLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQ 184
R V Q+ LPD VD+ QR SVL PS++ISY S RPLS+ ++R++TLD +T QQ
Sbjct: 159 RPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQ 218
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
EV F+ILCSND+VG VIGKGGTI++ALQ+EAGA ISVGA + ECDERLIT+TASE PESR
Sbjct: 219 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESR 278
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
YSPAQ V+LVF+R IE EKGLD S +KG V+ARLVV SNQVGCL+GKGGTIISEMR
Sbjct: 279 YSPAQNGVILVFNRSIEAGIEKGLD-SGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMR 337
Query: 305 KVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF-SGTLNTAR 362
K +G IRII SDQ+ KC SEND+VVQISGEF V+D +Y++TGRLRDN F S TLN A
Sbjct: 338 KASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAG 397
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQ 399
RS SS + E SPY R++DPASFG+HSSV VS FS+
Sbjct: 398 IRS-SSAMNEISPYGRVRDPASFGLHSSVGVSPSFSR 433
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/277 (66%), Positives = 217/277 (78%), Gaps = 4/277 (1%)
Query: 125 RLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQ 184
R V Q+ LPD VD+ QR SVL PS++ISY S RPLS+ ++R++TLD +T QQ
Sbjct: 175 RPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQ 234
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
EV F+ILCSND+VG VIGKGGTI++ALQ+EAGA ISVGA + ECDERLIT+TASE PESR
Sbjct: 235 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESR 294
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
YSPAQ V+LVF+R IE EKGLD S +KG V+ARLVV SNQVGCL+GKGGTIISEMR
Sbjct: 295 YSPAQNGVILVFNRSIEAGIEKGLD-SGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMR 353
Query: 305 KVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF-SGTLNTAR 362
K +G IRII SDQ+ KC SEND+VVQISGEF V+D +Y++TGRLRDN F S TLN A
Sbjct: 354 KASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAG 413
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQ 399
RS SS + E SPY R++DPASFG+HSSV VS FS+
Sbjct: 414 IRS-SSAMNEISPYGRVRDPASFGLHSSVGVSPSFSR 449
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 164/254 (64%), Positives = 200/254 (78%), Gaps = 1/254 (0%)
Query: 129 AVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSF 188
AV E L DLHVD L QR S L+ PSSS SY + V LS E +RV++L+ + QQE++F
Sbjct: 72 AVPCETLTDLHVDHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVSSLEPKAHQQEITF 131
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
+I+CSND++G VIGKGG IIRALQSE GA +SVG ++ EC++RLIT+TASE PESRYSPA
Sbjct: 132 KIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRYSPA 191
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
QKA VLVFSR +E EKG+D N G V A+LVV+SNQVGCLLGKGG I+SEMRK TG
Sbjct: 192 QKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATG 251
Query: 309 TSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTS 367
SIRI+ +D++ KC S+ND+VVQISGEFS V+DA+YN TGRLRDN F GTL +A TRS S
Sbjct: 252 ASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLFGGTLKSAGTRSLS 311
Query: 368 SVLTETSPYSRLKD 381
SV ++TSPY RL+D
Sbjct: 312 SVQSDTSPYGRLRD 325
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 164/254 (64%), Positives = 200/254 (78%), Gaps = 1/254 (0%)
Query: 129 AVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSF 188
AV E L DLHVD L QR S L+ PSSS SY + V LS E +RV++L+ + QQE++F
Sbjct: 274 AVPCETLTDLHVDHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVSSLEPKAHQQEITF 333
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
+I+CSND++G VIGKGG IIRALQSE GA +SVG ++ EC++RLIT+TASE PESRYSPA
Sbjct: 334 KIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRYSPA 393
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
QKA VLVFSR +E EKG+D N G V A+LVV+SNQVGCLLGKGG I+SEMRK TG
Sbjct: 394 QKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATG 453
Query: 309 TSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTS 367
SIRI+ +D++ KC S+ND+VVQISGEFS V+DA+YN TGRLRDN F GTL +A TRS S
Sbjct: 454 ASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLFGGTLKSAGTRSLS 513
Query: 368 SVLTETSPYSRLKD 381
SV ++TSPY RL+D
Sbjct: 514 SVQSDTSPYGRLRD 527
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 18/185 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V+FR+LC++ ++G VIGK GT+I+ LQ GA I + + E +R+I V +
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 239 -------EGPESRYSPAQKAVVLVFSRLIEGTSE-KGLDFSSNKGLLVNARLVVASNQVG 290
+G S AQ+A++ VF R++E +E +G++ V+ RLV S Q G
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRT---VSCRLVADSAQAG 164
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++GKGG ++ +++K TG I + D L CIS D V++I G S VK A+ V+ L+
Sbjct: 165 SVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQ 224
Query: 351 DNHFS 355
D H +
Sbjct: 225 DRHHA 229
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/270 (59%), Positives = 203/270 (75%), Gaps = 4/270 (1%)
Query: 129 AVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSF 188
AV E LPDLH+D + QRNSVL PSSS + S + LS+++D + +D QQ+V F
Sbjct: 247 AVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHSLSIDADMLPPVDTNVAQQDVVF 306
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
+ILC+ND++G VIGKGGTI+RALQ+E+GA +SVG ++ CDERLI++TASE ESRYSPA
Sbjct: 307 KILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPA 366
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
QKAVVLVFSR ++ EK + SS+KG V ARLVV SNQVGC+LGKGG IISE+RKVTG
Sbjct: 367 QKAVVLVFSRSVDVAIEKWQE-SSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTG 425
Query: 309 TSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS-- 365
T+IRII SDQ+ C +E+D +VQISGEFS V+DA+YNVTGRLRDN FS L+ + TR+
Sbjct: 426 TNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFSSVLSNSGTRNGG 485
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAVSH 395
+SV ETSPY R++D A + V SH
Sbjct: 486 GTSVYPETSPYGRVRDTAPLVRSTPVGTSH 515
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 97/181 (53%), Gaps = 15/181 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V+FR+LC ++G VIGK G +I+ LQ G I V E +R++TV S
Sbjct: 53 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 112
Query: 239 --------EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
G E S AQ+ ++ VF R++E +E + +V RL+ QVG
Sbjct: 113 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 172
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++GKGG ++ ++RK +G IR+++D+L C +D +++I G+ +K A+ V+ RL+
Sbjct: 173 SVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQ 232
Query: 351 D 351
D
Sbjct: 233 D 233
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/235 (67%), Positives = 179/235 (76%), Gaps = 3/235 (1%)
Query: 150 LTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIR 209
L T P SSI+Y S V PLSLESDRV T D QQ V FRILC+ D++G VIGKGG I+R
Sbjct: 265 LPTIPKSSINYASRVHPLSLESDRVVTPDTNIPQQLV-FRILCTTDRIGGVIGKGGNIVR 323
Query: 210 ALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLD 269
ALQ+E GA ISVG T+ ECDERLITVTASE PESRYS AQK +VLVFSR +E EKGLD
Sbjct: 324 ALQNETGAAISVGPTVSECDERLITVTASENPESRYSAAQKTIVLVFSRAVESGIEKGLD 383
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQL-LKCISENDR 327
S++G V ARLVV+ +QVGCLLGKGGTIISEMRK T TSIRII DQ KC+ E D
Sbjct: 384 PGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDH 443
Query: 328 VVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDP 382
VV+ISG+F VKDA+Y+VTGRLRDN FSG L+T RS SSVL E SPY +L DP
Sbjct: 444 VVEISGDFVNVKDAIYHVTGRLRDNLFSGMLSTPGARSNSSVLAEISPYVKLMDP 498
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 20/179 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR- 244
VSFR+LC ++G VIGK G II+ LQ + GA + + + +R+ITV GP ++
Sbjct: 36 VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVI---GPITQS 92
Query: 245 ------------YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
S Q+A+V VF R++E +E S +V+ R++ + VG +
Sbjct: 93 AVVFSRIESAVEVSKGQEALVRVFERILEVAAES----DSVADGVVSCRMLAEVSSVGAV 148
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+GKGG ++ ++RK G I+++ D+L C + N+ +++I G+ S VK + V+ L+D
Sbjct: 149 IGKGGKVVEKIRKDCGCRIKVLVDKLPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQD 207
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/266 (61%), Positives = 193/266 (72%), Gaps = 12/266 (4%)
Query: 129 AVSQEILPDLHVDILSQRNSVLTT------AP----SSSISYVSAVRPLSLESDRVATLD 178
AVS+ P++ V+IL Q ++V T AP +SSI Y S SLES+RV+TLD
Sbjct: 246 AVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPTVTNSSIDYASGTHLFSLESERVSTLD 305
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
T QQ+V FRILC+ND+VG VIGKGG I+ ALQ+E GA IS+G + CDERLITVTAS
Sbjct: 306 TSTPQQQVVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKVAGCDERLITVTAS 365
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E PESRYS AQK VVLVFSR++E EKGLD S++G V+ RLVV+ NQVGCLLGKGGT
Sbjct: 366 ENPESRYSAAQKTVVLVFSRVVESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGT 425
Query: 299 IISEMRKVTGTSIRIIS-DQL-LKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
IISEMRK T TSIRII DQ KC+ END VV+I G+F VKD++Y++TGRLRDN FS
Sbjct: 426 IISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILGDFLNVKDSIYHITGRLRDNLFSS 485
Query: 357 TLNTARTRSTSSVLTETSPYSRLKDP 382
L T RS+SSVL ETSPY R DP
Sbjct: 486 ILGTPGARSSSSVLAETSPYVRSMDP 511
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 99/176 (56%), Gaps = 14/176 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE------ 239
V FR+LC + ++G +IGKGG II+ LQ + GA I + E +R+IT+ S
Sbjct: 58 VLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVV 117
Query: 240 ----GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
G S Q+A+V VF R++E +E S G LV+ RL+ + VG ++GK
Sbjct: 118 FSGIGSAIEVSKGQEALVRVFERILEVAAES----DSVAGGLVSCRLLAEISSVGAVIGK 173
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
GG + ++RK G ++++ D+L C S N+ +++I G+ S VK + V+ RL+D
Sbjct: 174 GGKTVEKIRKDCGCKVKVLIDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQD 229
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/246 (60%), Positives = 180/246 (73%), Gaps = 1/246 (0%)
Query: 160 YVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI 219
Y + + L E +RV++L+ + +QEV+FRILCSND+VG VIGKGG I+RALQSE GA I
Sbjct: 293 YATRIHSLPTEVNRVSSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATI 352
Query: 220 SVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
S+G + EC++RLIT+ ASE PESRYSPAQKA VLVFSR IE EKGLD NKG +V
Sbjct: 353 SIGPAVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVT 412
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKV 338
RLVV S+QVGCL+GKGG I+SEMRK TG +IRII +DQ+ KC S+ND+VVQISGEFS V
Sbjct: 413 VRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSV 472
Query: 339 KDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFS 398
+DA+YN GRLRDN F T N+A TRS SS+ +TSPY R +D G A SH S
Sbjct: 473 QDALYNAMGRLRDNLFVSTQNSAGTRSLSSLRVDTSPYGRQQDVVPLGSQLPPATSHSLS 532
Query: 399 QPPLTQ 404
+ Q
Sbjct: 533 RHTFAQ 538
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 101/179 (56%), Gaps = 14/179 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR- 244
V+FR+LC+ ++G VIGK G++I+ LQ GA I + E +R+I V A +
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 245 ---------YSPAQKAVVLVFSRLIE-GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
S AQ+A++ VF R++ G ++ +D +++ RLV + Q G ++G
Sbjct: 105 LLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDR---VMSCRLVADAAQAGSVIG 161
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
KGG ++ ++K TG IR+++D L C S +D +++I G S VK A+ V+ RL+D H
Sbjct: 162 KGGKVVERIKKETGCKIRVLTDDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQDCH 220
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/249 (59%), Positives = 187/249 (75%), Gaps = 2/249 (0%)
Query: 129 AVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSF 188
+V E L +LH+D QR+S L+T + S S LS E +RV+ LD + QQEV+F
Sbjct: 213 SVPLESLTNLHIDRRLQRSSTLSTLSNRSNGNASGAPKLSAEVNRVSALDPKALQQEVTF 272
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE-GPESRYSP 247
RI+CSND+VGAVIGKGG+I+RALQ+E+GA IS G ++ EC++RL+T+TASE PESRYSP
Sbjct: 273 RIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQNPESRYSP 332
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
AQKAVVLVFS+ +E EKGLD S K V A+LVV SNQVGCLLGKGG I+SEMRK T
Sbjct: 333 AQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCLLGKGGAIVSEMRKAT 392
Query: 308 GTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRST 366
G +IR+I +D++ KC+S+ND++VQISGEFS V+ A+YN TGRLRDN F T N+ RS
Sbjct: 393 GANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDNLFVSTQNSGGARSL 452
Query: 367 SSVLTETSP 375
SSVL+ P
Sbjct: 453 SSVLSGGKP 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 105/174 (60%), Gaps = 3/174 (1%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA- 237
+R V+FR+LC +VGA+IGK G +I+ LQ GA I + P+ +R+I V+A
Sbjct: 18 SRPYTTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAP 77
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ + S AQ A++ VF R+++ +E ++ +V+ RL+ ++QVG ++GK G
Sbjct: 78 AAASDGEVSTAQVALLKVFDRVLDVAAETAGTEVGDR--VVSCRLLADTSQVGAVIGKAG 135
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
++ ++R TG IR++++ L C + +D +V++ G+ + VK A+ V+G L+D
Sbjct: 136 KVVEKIRMDTGCKIRVLNEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQD 189
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 153/259 (59%), Positives = 185/259 (71%), Gaps = 25/259 (9%)
Query: 125 RLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQ 184
+ F AV QE LP++ V+I QRN ++ T ++++S LE+DRV +LD + QQ
Sbjct: 244 KYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSCAPVPHNFLLETDRVPSLDMKLFQQ 303
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
EV F+ILC ND VG VIGKGGTII+ALQ+E GA I++GAT+ E DERLITV ASE PESR
Sbjct: 304 EVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASENPESR 363
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
YS AQKAVVLVFS RLVV SNQVGCLLGKGG IIS+MR
Sbjct: 364 YSAAQKAVVLVFS-----------------------RLVVPSNQVGCLLGKGGIIISDMR 400
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTART 363
K TGTSI+I++ DQL KC+ EN++VVQISG+F VKDAVY+VTGRLRDN FS L+T T
Sbjct: 401 KTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDNLFSSALSTPVT 460
Query: 364 RSTSSVLTETSPYSRLKDP 382
RST +V+TE SPY RLK+P
Sbjct: 461 RST-TVITEASPYGRLKEP 478
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 10/217 (4%)
Query: 145 QRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKG 204
Q N+ P+ + + +S RP +++ A VSFR+LC ++G +IGK
Sbjct: 15 QYNAAGMPDPNPTANGLSNKRPKQPPANQNAAAPLPLPPGHVSFRLLCHASRIGGIIGKS 74
Query: 205 GTIIRALQSEAGAFISVGATMPECDERLITVTAS---------EGPESRYSPAQKAVVLV 255
GTII+ LQ ++GA I + + E +R+ITV A E E S AQ+ ++ V
Sbjct: 75 GTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRVESEEVDVSRAQEGLIRV 134
Query: 256 FSRLIEGTSE-KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
F R++E +E G++ + G +V+ R++ S Q G ++GKGG ++ ++RK G IR++
Sbjct: 135 FERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRVL 194
Query: 315 SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+D+L C N+ +++I G+ VK A+ V+ L+D
Sbjct: 195 TDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQD 231
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/246 (60%), Positives = 178/246 (72%), Gaps = 1/246 (0%)
Query: 160 YVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI 219
Y + V LS E +RV++L+ + QQEVSFRILCSND+VG VIGKGG I+RALQSE GA I
Sbjct: 285 YATRVHSLSAEVNRVSSLEPKALQQEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATI 344
Query: 220 SVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
S+G + EC++RLIT+ ASE PESRYSPAQKA VLVFSR IE EK LD NKG V
Sbjct: 345 SIGPLVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVT 404
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKV 338
RLVV S+QVGCL+GKGG I+SE+RK TG +IRII +DQ+ KC S+ND+VVQISGEFS V
Sbjct: 405 VRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSV 464
Query: 339 KDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFS 398
+DA+YN TGRLRDN F T N+A TRS SS+ +TSPY +D G SH S
Sbjct: 465 QDALYNATGRLRDNLFVSTQNSAGTRSLSSLRVDTSPYGIQQDFVPHGSQLPATTSHCLS 524
Query: 399 QPPLTQ 404
+ Q
Sbjct: 525 RHTFAQ 530
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 14/177 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V+FR+LC+ ++G VIGK G++I+ LQ GA I + E +R+I V A +
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKV 104
Query: 246 ----------SPAQKAVVLVFSRLIEGTSE-KGLDFSSNKGLLVNARLVVASNQVGCLLG 294
S AQ+A++ VF R++E +E +G+D +++ RLV S Q G ++G
Sbjct: 105 LLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDR---VMSCRLVADSAQAGSVIG 161
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
KGG ++ ++K TG IR+++D L C S +D +++I G S VK A+ V+ RL+D
Sbjct: 162 KGGKVVERIKKETGCKIRVLTDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQD 218
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/248 (58%), Positives = 184/248 (74%), Gaps = 1/248 (0%)
Query: 129 AVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSF 188
+V E L +LH+D QR+S L+T + S S LS E +RV+ LD + QQEV+F
Sbjct: 56 SVPLESLTNLHIDHHLQRSSTLSTLSNRSNGNASGAHKLSAEVNRVSALDPKAYQQEVTF 115
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
RI+CSND+VGAVIGKGG+I+RALQ+E+GA ISVG ++ EC++RL+T+TASE PES YSPA
Sbjct: 116 RIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPA 175
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
QKAVVLVFS+ +E EKGL+ S K V ARLVV SNQVGCLLGKGG I+SEMRK TG
Sbjct: 176 QKAVVLVFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATG 235
Query: 309 TSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTS 367
+IR+I +DQ+ C+S+ND++VQISG FS V+ A++N TGRLRD+ F T N+ RS S
Sbjct: 236 ANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLFVSTQNSGGARSLS 295
Query: 368 SVLTETSP 375
SVL P
Sbjct: 296 SVLAGGQP 303
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 152/268 (56%), Positives = 190/268 (70%), Gaps = 20/268 (7%)
Query: 129 AVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSF 188
AV E LPDLH+D + QRNSVL PSSS + S + LS+++D + +D QQ+V F
Sbjct: 252 AVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHSLSIDADMLPPVDTNVAQQDVVF 311
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
+ILC+ND++G VIGKGGTI+RALQ+E+GA +SVG ++ CDERLI++TASE ESRYSPA
Sbjct: 312 KILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPA 371
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
QKAVVLVFSR ++ EK + SS+KG V ARLVV SNQVGC+LGKGG IISE+RKVTG
Sbjct: 372 QKAVVLVFSRSVDVAIEKWQE-SSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTG 430
Query: 309 TSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTS 367
T+IRII SDQ+ C +E+D +VQISGEFS V+DA+YNVTGRLRDN F
Sbjct: 431 TNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLF------------- 477
Query: 368 SVLTETSPYSRLKDPASFGVHSSVAVSH 395
PY R++D A + V SH
Sbjct: 478 -----LVPYGRVRDTAPLVRSTPVGTSH 500
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 97/181 (53%), Gaps = 15/181 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V+FR+LC ++G VIGK G +I+ LQ G I V E +R++TV S
Sbjct: 58 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 117
Query: 239 --------EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
G E S AQ+ ++ VF R++E +E + +V RL+ QVG
Sbjct: 118 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 177
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++GKGG ++ ++RK +G IR+++D+L C +D +++I G+ +K A+ V+ RL+
Sbjct: 178 SVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQ 237
Query: 351 D 351
D
Sbjct: 238 D 238
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 248/437 (56%), Gaps = 56/437 (12%)
Query: 1 MTGSRFNEANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISH 60
M G+R E Q ++H+P+E QES+ R VE ++ R + P T+ R D I H
Sbjct: 232 MVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPH 291
Query: 61 ETIR-RSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEAL- 118
+T+ R +EAVP + +EA Q++L R +E+ Q+ LRR ++V E+ + S+ L
Sbjct: 292 DTLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLR 351
Query: 119 ------------SIETQHRLFGAV------------------------SQEILPDLHVDI 142
S ++ HR F V +QE L D
Sbjct: 352 GDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADY 411
Query: 143 LSQRNSVLTTAP-----SSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKV 197
L+ R S L T P S+S++ + ++P E + Q+V F+ILCS +
Sbjct: 412 LAHRYSTLDTHPHSFTTSASMANTATMKPPPSEVE--------VGNQDVVFKILCSTENA 463
Query: 198 GAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFS 257
G VIG GG ++R L SE GAFI+VG T+ +C+ERLI VTASE PE + SPAQKA++L+FS
Sbjct: 464 GGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFS 523
Query: 258 RLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-D 316
RL E + K LD + ARLVV ++Q+GC+LGKGG I+SEMRK TG +I+I+ +
Sbjct: 524 RLFELATNKILDNGPRSS--ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVE 581
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPY 376
Q KCISEND+VVQI+GEF V++A++++T RLRD+ FS ++ + +S+S++ TE Y
Sbjct: 582 QNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSSSALTTERF-Y 640
Query: 377 SRLKD-PASFGVHSSVA 392
R D P S G H SV+
Sbjct: 641 DRQSDNPLSIGSHQSVS 657
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY- 245
+FR+LC VGAVIGK G +I+ LQ GA I V +R+IT+ A +SR
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 246 --------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVA 285
S AQ A++ VF L +E D V RL+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELL---AAEADSD-------TVVCRLLTE 157
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
S+ G ++GKGG ++ +RK TG I I + L C +D +V++ G VK A+ ++
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Query: 346 TGRLRD 351
+ L++
Sbjct: 218 SRCLQN 223
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 248/437 (56%), Gaps = 56/437 (12%)
Query: 1 MTGSRFNEANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISH 60
M G+R E Q ++H+P+E QES+ R VE ++ R + P T+ R D I H
Sbjct: 232 MVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPH 291
Query: 61 ETIR-RSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEAL- 118
+T+ R +EAVP + +EA Q++L R +E+ Q+ LRR ++V E+ + S+ L
Sbjct: 292 DTLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLR 351
Query: 119 ------------SIETQHRLFGAV------------------------SQEILPDLHVDI 142
S ++ HR F V +QE L D
Sbjct: 352 GDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADY 411
Query: 143 LSQRNSVLTTAP-----SSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKV 197
L+ R S L T P S+S++ + ++P E + Q+V F+ILCS +
Sbjct: 412 LAHRYSTLDTHPHSFTTSASMANTATMKPPPSEVE--------VGNQDVVFKILCSTENA 463
Query: 198 GAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFS 257
G VIG GG ++R L SE GAFI+VG T+ +C+ERLI VTASE PE + SPAQKA++L+FS
Sbjct: 464 GGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFS 523
Query: 258 RLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-D 316
RL E + K LD + ARLVV ++Q+GC+LGKGG I+SEMRK TG +I+I+ +
Sbjct: 524 RLFELATNKILDNGPRSS--ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVE 581
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPY 376
Q KCISEND+VVQI+GEF V++A++++T RLRD+ FS ++ + +S+S++ TE Y
Sbjct: 582 QNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSSSALTTERF-Y 640
Query: 377 SRLKD-PASFGVHSSVA 392
R D P S G H SV+
Sbjct: 641 DRQSDNPLSIGSHQSVS 657
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY- 245
+FR+LC VGAVIGK G +I+ LQ GA I V +R+IT+ A +SR
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 246 --------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVA 285
S AQ A++ VF L +E D V RL+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELL---AAEADSD-------TVVCRLLTE 157
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
S+ G ++GKGG ++ +RK TG I I + L C +D +V++ G VK A+ ++
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Query: 346 TGRLRD 351
+ L++
Sbjct: 218 SRCLQN 223
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 248/437 (56%), Gaps = 56/437 (12%)
Query: 1 MTGSRFNEANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISH 60
M G+R E Q ++H+P+E QES+ R VE ++ R + P T+ R D I H
Sbjct: 232 MVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPH 291
Query: 61 ETIR-RSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEAL- 118
+T+ R +EAVP + +EA Q++L R +E+ Q+ LRR ++V E+ + S+ L
Sbjct: 292 DTLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLR 351
Query: 119 ------------SIETQHRLFGAV------------------------SQEILPDLHVDI 142
S ++ HR F V +QE L D
Sbjct: 352 GDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADY 411
Query: 143 LSQRNSVLTTAP-----SSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKV 197
L+ R S L T P S+S++ + ++P E + Q+V F+ILCS +
Sbjct: 412 LAHRYSTLDTHPHSFTTSASMANTATMKPPPSEVE--------VGNQDVVFKILCSTENA 463
Query: 198 GAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFS 257
G VIG GG ++R L SE GAFI+VG T+ +C+ERLI VTASE PE + SPAQKA++L+FS
Sbjct: 464 GGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFS 523
Query: 258 RLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-D 316
RL E + K LD + ARLVV ++Q+GC+LGKGG I+SEMRK TG +I+I+ +
Sbjct: 524 RLFELATNKILDNGPRSS--ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVE 581
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPY 376
Q KCISEND+VVQI+GEF V++A++++T RLRD+ FS ++ + +S+S++ TE Y
Sbjct: 582 QNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSSSALTTERF-Y 640
Query: 377 SRLKD-PASFGVHSSVA 392
R D P S G H SV+
Sbjct: 641 DRQSDNPLSIGSHQSVS 657
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY- 245
+FR+LC VGAVIGK G +I+ LQ GA I V +R+IT+ A +SR
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 246 --------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVA 285
S AQ A++ VF L +E D V RL+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELL---AAEADSD-------TVVCRLLTE 157
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
S+ G ++GKGG ++ +RK TG I I + L C +D +V++ G VK A+ ++
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Query: 346 TGRLRD 351
+ L++
Sbjct: 218 SRCLQN 223
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 248/437 (56%), Gaps = 56/437 (12%)
Query: 1 MTGSRFNEANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISH 60
M G+R E Q ++H+P+E QES+ R VE ++ R + P T+ R D I H
Sbjct: 232 MVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPH 291
Query: 61 ETIR-RSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEAL- 118
+T+ R +EAVP + +EA Q++L R +E+ Q+ LRR ++V E+ + S+ L
Sbjct: 292 DTLHLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLR 351
Query: 119 ------------SIETQHRLFGAV------------------------SQEILPDLHVDI 142
S ++ HR F V +QE L D
Sbjct: 352 GDCFRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADY 411
Query: 143 LSQRNSVLTTAP-----SSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKV 197
L+ R S L T P S+S++ + ++P E + Q+V F+ILCS +
Sbjct: 412 LAHRYSTLDTHPHSFTTSASMANTATMKPPPSEVE--------VGNQDVVFKILCSTENA 463
Query: 198 GAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFS 257
G VIG GG ++R L SE GAFI+VG T+ +C+ERLI VTASE PE + SPAQKA++L+FS
Sbjct: 464 GGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFS 523
Query: 258 RLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-D 316
RL E + K LD + ARLVV ++Q+GC+LGKGG I+SEMRK TG +I+I+ +
Sbjct: 524 RLFELATNKILDNGPRSS--ITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVE 581
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPY 376
Q KCISEND+VVQI+GEF V++A++++T RLRD+ FS ++ + +S+S++ TE Y
Sbjct: 582 QNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSSSALTTERF-Y 640
Query: 377 SRLKD-PASFGVHSSVA 392
R D P S G H SV+
Sbjct: 641 DRQSDNPLSIGSHQSVS 657
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY- 245
+FR+LC VGAVIGK G +I+ LQ GA I V +R+IT+ A +SR
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 246 --------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVA 285
S AQ A++ VF L +E D V RL+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELL---AAEADSD-------TVVCRLLTE 157
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
S+ G ++GKGG ++ +RK TG I I + L C +D +V++ G VK A+ ++
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Query: 346 TGRLRD 351
+ L++
Sbjct: 218 SRCLQN 223
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 256/455 (56%), Gaps = 70/455 (15%)
Query: 1 MTGSRFNEANLQETIHKPLEVAFQESICRPVETILHE------------TIRRPVDTIPH 48
M G+R E Q ++H+P+E QES+ R +E ++ T+ RP D PH
Sbjct: 230 MVGNRPLEKEFQASLHRPIETIIQESLPRSIEVNPYDYRLRKDEIFPRGTLARPSDVNPH 289
Query: 49 ETIH-RPLDTISHETIRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFA 107
+T+H R ++ + +R +EA D + R VEA Q+ L R +E+ Q++LRR ++V
Sbjct: 290 DTLHHRHIEAVPQGALRMHIEADRQDALRRHVEADRQDALRRHIEADRQDVLRRHIDVVP 349
Query: 108 PESSHRSSEAL-------------SIETQHRLFGAVS----------------------- 131
E+ + S+ + S ++ HR F V
Sbjct: 350 RETLYMPSDVVRGDCFRQHKERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETI 409
Query: 132 -QEILPDLHVDILSQRNSVLTT---APSSSISYVSAVRPLSLESDRVATLDARTQQQEVS 187
QE L D L+ R S+L T S+SI+ ++++P E + Q+V
Sbjct: 410 PQETLRRQSADYLAHRYSILDTHSITTSASIANTASMKPPPSEVE--------VGNQDVV 461
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
F+ILCS + G VIG GG ++R L SE GAFI+VG T+ +C+ERLI VTA E PE + SP
Sbjct: 462 FKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPENPECQSSP 521
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
AQKA++L+FSRL E +++K LD + ARLVV ++Q+GC+LGKGG I+SEMRK T
Sbjct: 522 AQKAIMLLFSRLFELSTKKILDNGPRTS--ITARLVVPTSQIGCVLGKGGVIVSEMRKTT 579
Query: 308 GTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRST 366
G +I+I+ +Q KC+SEND+V+QI+GEF V++A++++T RLRD+ FS ++ + T+S+
Sbjct: 580 GATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVFSNSMKNSITKSS 639
Query: 367 SSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPP 401
S++ TE + + +P S G H SV S PP
Sbjct: 640 SALTTERIYHRQSDNPLSIGSHQSV------SNPP 668
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY- 245
+FR+LC VGAVIGK G +I+ LQ GA I V +R+IT+ A +SR
Sbjct: 46 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVK 105
Query: 246 --------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVA 285
S AQ A++ VF L +E D V RL+
Sbjct: 106 LGVNNNGNAEGEKKEEEVEVSKAQGALIKVFELL---AAEADSD-------TVVCRLLTE 155
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
S+ G ++GKGG ++ +RK TG I I ++ L C +D +V+I G VK A+ ++
Sbjct: 156 SSHAGAVIGKGGQMVGSIRKETGCKISIRTENLPICADTDDEMVEIEGNAIAVKKALVSI 215
Query: 346 TGRLRD 351
+ L++
Sbjct: 216 SRCLQN 221
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 249/449 (55%), Gaps = 68/449 (15%)
Query: 1 MTGSRFNEANLQETIHKPLEVAFQESICRPVETILHE------------TIRRPVDTIPH 48
M G+R E Q ++H+P+E QES+ R VE ++ T+ R D IPH
Sbjct: 232 MVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPH 291
Query: 49 ETIH-RPLDTISHETIRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFA 107
+T+H R ++ + +R +EA D + R VEA Q+ L R +E+ Q+ LRR ++V
Sbjct: 292 DTLHLRRIEAVPQGALRMYIEADRQDVLRRHVEADRQDALRRHVEADRQDALRRRIDVVP 351
Query: 108 PESSHRSSEAL-------------SIETQHRLFGAV------------------------ 130
E+ + S+ L S ++ HR F V
Sbjct: 352 RETLYMPSDVLRGDCFLQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETM 411
Query: 131 SQEILPDLHVDILSQRNSVLTTAP-----SSSISYVSAVRPLSLESDRVATLDARTQQQE 185
+QE L D L+ R S L T P S+S++ + ++P E + Q+
Sbjct: 412 TQETLRGQSADYLAHRYSTLDTHPHSFTTSASMANTATMKPPPSEVE--------VGNQD 463
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V F+ILCS + G VIG GG ++R L SE GAFI+VG + +C+ERLI VTASE PE +
Sbjct: 464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPECQS 523
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
SPAQKA++L+FSRL E + K LD + ARLVV ++Q+GC+LGKGG I+SEMRK
Sbjct: 524 SPAQKAIMLIFSRLFELATNKILDNGPRSS--ITARLVVPTSQIGCVLGKGGVIVSEMRK 581
Query: 306 VTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
TG +I+I+ +Q KCISEND+VVQI+ EF V++A++++T RLRD+ FS ++ + +
Sbjct: 582 TTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSMKNSLAK 641
Query: 365 STSSVLTETSPYSRLKD-PASFGVHSSVA 392
S+S++ TE Y R D P S G H SV+
Sbjct: 642 SSSALTTERF-YDRQSDNPLSIGSHQSVS 669
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY- 245
+FR+LC VGAVIGK G +I+ LQ GA I V +R+IT+ A +SR
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 246 --------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVA 285
S AQ A++ VF L +E D V RL+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELL---AAEADSD-------TVVCRLLTE 157
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
S+ G ++GKGG ++ +RK TG I I + L C +D +V++ G VK A+ ++
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Query: 346 TGRLRD 351
+ L++
Sbjct: 218 SRCLQN 223
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 249/449 (55%), Gaps = 68/449 (15%)
Query: 1 MTGSRFNEANLQETIHKPLEVAFQESICRPVETILHE------------TIRRPVDTIPH 48
M G+R E Q ++H+P+E QES+ R VE ++ T+ R D IPH
Sbjct: 232 MVGNRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPH 291
Query: 49 ETIH-RPLDTISHETIRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFA 107
+T+H R ++ + +R +EA D + R VEA Q+ L R +E+ Q+ LRR ++V
Sbjct: 292 DTLHLRRIEAVPQGALRMYIEADRQDVLRRHVEADRQDALRRHVEADRQDALRRRIDVVP 351
Query: 108 PESSHRSSEAL-------------SIETQHRLFGAV------------------------ 130
E+ + S+ L S ++ HR F V
Sbjct: 352 RETLYMPSDVLRGDCFLQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETM 411
Query: 131 SQEILPDLHVDILSQRNSVLTTAP-----SSSISYVSAVRPLSLESDRVATLDARTQQQE 185
+QE L D L+ R S L T P S+S++ + ++P E + Q+
Sbjct: 412 TQETLRGQSADYLAHRYSTLDTHPHSFTTSASMANTATMKPPPSEVE--------VGNQD 463
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V F+ILCS + G VIG GG ++R L SE GAFI+VG + +C+ERLI VTASE PE +
Sbjct: 464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPECQS 523
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
SPAQKA++L+FSRL E + K LD + ARLVV ++Q+GC+LGKGG I+SEMRK
Sbjct: 524 SPAQKAIMLIFSRLFELATNKILDNGPRSS--ITARLVVPTSQIGCVLGKGGVIVSEMRK 581
Query: 306 VTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
TG +I+I+ +Q KCISEND+VVQI+ EF V++A++++T RLRD+ FS ++ + +
Sbjct: 582 TTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSMKNSLAK 641
Query: 365 STSSVLTETSPYSRLKD-PASFGVHSSVA 392
S+S++ TE Y R D P S G H SV+
Sbjct: 642 SSSALTTERF-YDRQSDNPLSIGSHQSVS 669
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY- 245
+FR+LC VGAVIGK G +I+ LQ GA I V +R+IT+ A +SR
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 246 --------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVA 285
S AQ A++ VF L +E D V RL+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELL---AAEADSD-------TVVCRLLTE 157
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
S+ G ++GKGG ++ +RK TG I I + L C +D +V++ G VK A+ ++
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Query: 346 TGRLRD 351
+ L++
Sbjct: 218 SRCLQN 223
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 193/307 (62%), Gaps = 30/307 (9%)
Query: 101 RPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISY 160
RP E F E+S AV E L DL++D QR+S ++T+ S
Sbjct: 198 RPYEAFQNETS-----------------AVPHEGLTDLNMDFRLQRSSAISTSSIRSNGV 240
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
S PLS+E +RV++LD +QEV+FRILCS D++GAV+GKGG+I++ALQ+E GA IS
Sbjct: 241 PSKSHPLSVEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANIS 300
Query: 221 VGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
VG + EC++RLIT+TA E PESR+SPAQ+AVVLVF R IE EK +D+ SNK V A
Sbjct: 301 VGPPVVECEDRLITITALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTA 360
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVK 339
+LVV SNQVG LLGKGG I+SEMRK T TSIRI + ++ KC S ND+VVQISGE V+
Sbjct: 361 QLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVR 420
Query: 340 DAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKD--PASFGVHSSVAVSHDF 397
DA+YN T RLRD+ F N+ T PY R +D P G S V +H
Sbjct: 421 DALYNATRRLRDHIFLIAQNSG----------GTGPYRRPRDSIPLGLGGQSVVGSNHGP 470
Query: 398 SQPPLTQ 404
S L+Q
Sbjct: 471 SIHSLSQ 477
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 5/213 (2%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V FR+LC ++GA IGK G++I++LQ GA I + +C ER+I V + +
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGDV 79
Query: 246 S-PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
S Q+A++ VF R+++ + + D + +V+ RL+V + Q G ++GKGG +++++R
Sbjct: 80 SLNPQEALLKVFERILDVAAAES-DGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIR 138
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
TG IR+++D+L C +D +++I G S VK A+ V GRL+D TR
Sbjct: 139 ADTGCRIRVLNDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDCPPLDRTKMMGTR 198
Query: 365 STSSVLTETS--PYSRLKD-PASFGVHSSVAVS 394
+ ETS P+ L D F + S A+S
Sbjct: 199 PYEAFQNETSAVPHEGLTDLNMDFRLQRSSAIS 231
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 121/170 (71%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++C ND VG VIGKGG+ IRALQSE GA + V + + DER+I ++A E E
Sbjct: 154 EQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSE 213
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SP+Q A++ V+S++ SE +D SS+ V ARL+V + +GCLLGKGG+II+E
Sbjct: 214 MMRSPSQDALLRVYSKI----SEASMDKSSS----VPARLLVPAQHIGCLLGKGGSIIAE 265
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MRK+TG SIRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 266 MRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 315
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 136/219 (62%), Gaps = 14/219 (6%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
++EV F++LC +KVG++IGKGG+IIR LQSE GA I + P+ DER++ ++A E E
Sbjct: 325 EEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISARENLE 384
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
++SPAQ AV+ V R+ E + F G V ARL+V S Q+GCLLGKGG IISE
Sbjct: 385 QKHSPAQDAVIRVHCRIAE------IGF--EPGAAVVARLLVHSQQIGCLLGKGGIIISE 436
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF--SGTLN 359
MR+ TG SIRI + +Q+ KC S+ND +VQ+ G V+DA++ +T R+R+ F +++
Sbjct: 437 MRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRETIFPLKPSIS 496
Query: 360 TARTRSTSSVLTETSP--YSRLKDPASFGVHSS-VAVSH 395
S E P + DPAS G +SS V V H
Sbjct: 497 NVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPH 535
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 36/228 (15%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA- 237
A + +V FRILC K G VIGKGG IIR + + GA I + ++ CDER+I + A
Sbjct: 49 AGAAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVAD 108
Query: 238 ----------------SEGPES----------------RYSPAQKAVVLVFSRL--IEGT 263
++G ES SPAQ+A+V VF R+ ++
Sbjct: 109 AVKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEE 168
Query: 264 SEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCI 322
E+ + V RL+ SNQVGC+LG+GG I+ ++R+ +G IR++ D + C
Sbjct: 169 REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACA 228
Query: 323 SENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVL 370
S D ++QI+G F V+ A+ V+ L+DN + N+A + T +L
Sbjct: 229 SPGDELIQITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGML 276
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 119/170 (70%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++C N+ VG +IGKGG IRALQS+ GA + V + + DER+I ++A E E
Sbjct: 250 EQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENSE 309
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+SPAQ AV+ V+SR+ SE +D SS V ARL+V S +GCLLGKGG+II+E
Sbjct: 310 MMHSPAQDAVLRVYSRI----SEASMDKSS----AVPARLLVPSQHIGCLLGKGGSIIAE 361
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MR VTG SIRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 362 MRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIRD 411
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 226 PECDERLITVTASEGPESRYSPAQKAVVLVFSRLI----------EGTSEKGLDFSSNKG 275
P DE ++ V+ + P A V V+ R++ EG EK +
Sbjct: 64 PVGDEVVLVVSGPDAP--------AAAVRVWERVVGHRVGGDDAGEGEEEKEVTG----- 110
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISG 333
+V R++ A QVGC+LGKGG + MR+ +G IR+ DQ+ C + D ++ ISG
Sbjct: 111 -VVGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNKDQVPPCALQGDELIHISG 169
Query: 334 EFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
FS + A+ V+ L+DN T N + RS
Sbjct: 170 SFSAARKALLLVSTCLQDNPRLETSNFSTGRS 201
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 77/244 (31%)
Query: 173 RVATLDARTQQQE------VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV---GA 223
RV DA ++E V R+L + +VG V+GKGG + ++ E+GA I V
Sbjct: 93 RVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNKD 152
Query: 224 TMPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRLIE---------------GTSE 265
+P C + LI ++ S +S A+KA++LV + L + G
Sbjct: 153 QVPPCALQGDELIHISGS------FSAARKALLLVSTCLQDNPRLETSNFSTGRSFGPPG 206
Query: 266 KGL-------------------------DFSSNKGLL---------VNARLVVASNQVGC 291
G+ +FSSN + R++ + VG
Sbjct: 207 SGVGCPPGVDSHSQRSYLPPHIPDYHARNFSSNVAAPGPRFFIEQEIVFRMICLNEMVGG 266
Query: 292 LLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE------FSKVKDAVYNV 345
++GKGG I ++ TG S+++I ++RV+ IS S +DAV V
Sbjct: 267 IIGKGGATIRALQSDTGASVKVID----AVADSDERVIVISARENSEMMHSPAQDAVLRV 322
Query: 346 TGRL 349
R+
Sbjct: 323 YSRI 326
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 121/170 (71%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++C ND VG VIGKGG+ IRALQSE GA + V + + DER+I ++A E E
Sbjct: 249 EQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSE 308
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SP+Q A++ V+S++ SE +D SS+ V ARL+V + +GCLLGKGG+II+E
Sbjct: 309 MMRSPSQDALLRVYSKI----SEASMDKSSS----VPARLLVPAQHIGCLLGKGGSIIAE 360
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MRK+TG SIRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 361 MRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 410
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 277 LVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD--QLLKCISENDRVVQISGE 334
+V R++ A QVGC+LGKGG + MR+ +G IR+ + Q+ C + D ++ ISG
Sbjct: 109 VVGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGS 168
Query: 335 FSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
FS + A+ V+ L+DN T N R
Sbjct: 169 FSAARKALLLVSTCLQDNPRPDTSNFPSGR 198
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 74/227 (32%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPEC---DERLITVTASE 239
V R+L + +VG V+GKGG + ++ E+GA I V +P C + LI ++ S
Sbjct: 110 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGS- 168
Query: 240 GPESRYSPAQKAVVLVFSRLIE---------------GTSEKGL---------------- 268
+S A+KA++LV + L + G G+
Sbjct: 169 -----FSAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPGVDPHSQRSYLP 223
Query: 269 ----------DFSSNKGLL---------VNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
+FSSN + R++ ++ VG ++GKGG+ I ++ TG
Sbjct: 224 PPHVPDYHARNFSSNGAAPGPRFFVEQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGA 283
Query: 310 SIRII-----SDQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRL 349
S+++I SD+ + IS EN +++ S +DA+ V ++
Sbjct: 284 SVKVIDPVADSDERIIVISARENSEMMR-----SPSQDALLRVYSKI 325
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 137/217 (63%), Gaps = 7/217 (3%)
Query: 137 DLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDK 196
D H + +S+L P S S S PLS ++ DA + EVSFR+LCSN
Sbjct: 240 DPHAEFFPHLSSLL--PPLSGNSGTS--HPLSSDAGEDPNQDAEAVRHEVSFRLLCSNGA 295
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
G++IGK GTI+R LQ+E GA I A M ER++T++A E ES +SPAQ A +LVF
Sbjct: 296 AGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNAAILVF 355
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT--IISEMRKVTGTSIRII 314
+R +E EKG +G V ARL+VAS+ V CL+ KGGT I SEM +V+G IRI+
Sbjct: 356 ARSVEHDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRIL 415
Query: 315 -SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+Q++ C SE+D V++I+GE+ V++A++ VTG+LR
Sbjct: 416 DGEQIMACASEDDVVIEITGEYKNVQNALFMVTGKLR 452
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 29/197 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGP 241
Q +V+FR++C +G +IG+ G+ I ++ + G + + D R+IT+ P
Sbjct: 21 QPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASP 80
Query: 242 ESR---------------------YSPAQKAVVLVFSRL--IEGTSEK--GLDFSSNKGL 276
R S AQ+AV+ V R+ ++G E+ G+D +SN
Sbjct: 81 GKRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNNSG 140
Query: 277 LVNAR--LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
L L+ + Q+G ++GKGG + MR+ +G IR + C S++D+++QI+G
Sbjct: 141 LGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPPP--HCASKDDQLIQITGS 198
Query: 335 FSKVKDAVYNVTGRLRD 351
VK A+ VT L D
Sbjct: 199 ILAVKKALVAVTDCLHD 215
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 122/172 (70%), Gaps = 8/172 (4%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
++EV F++LC +DKVG++IGKGG+++RALQ+E GA I + P+ DER++ ++A E E
Sbjct: 197 EEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSE 256
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
++SPAQ+AV+ V RL E + F + ++ A+L+V S QVGCLLGKGG +ISE
Sbjct: 257 QKHSPAQEAVIRVHCRLTE------IGFEPSAAVV--AKLLVRSPQVGCLLGKGGLVISE 308
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR+ TG SIRI S + +K IS+N+ VVQ+ G V+DA++++T R+R+ F
Sbjct: 309 MRRATGASIRIFSKEQIKYISQNEEVVQVIGSLQSVQDALFHITNRIRETIF 360
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 28/169 (16%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FRI+C K V GG + L + VGA +ER++ + E S
Sbjct: 21 FRIVCPAAKTADVAAIGGDGAKILVEDL-----VGA-----EERVVVIVGDE------SA 64
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
AQ A++ V R ++ K V+ +LV S QVGC+LG+GG I+ ++R+ +
Sbjct: 65 AQVALIRVLERTMD---------EETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDS 115
Query: 308 GTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS 355
G IR++ DQ D +QI+G F VK AV +V+ L +N++
Sbjct: 116 GAHIRVLPKDQPPP--PPGDEFIQITGNFGAVKKAVLSVSACLHENNYG 162
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 36/241 (14%)
Query: 141 DILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAV 200
D++ V+ S + V+ +R L T+D T+ VS +++ + +VG V
Sbjct: 47 DLVGAEERVVVIVGDESAAQVALIRVLE------RTMDEETKNSTVSCKLVAPSYQVGCV 100
Query: 201 IGKGGTIIRALQSEAGA-----------------FISVGATMPECDERLITVTAS--EGP 241
+G+GG I+ ++ ++GA FI + + +++V+A E
Sbjct: 101 LGRGGKIVEKIRQDSGAHIRVLPKDQPPPPPGDEFIQITGNFGAVKKAVLSVSACLHENN 160
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGT 298
+ P+ G + SS++ + V +L+ ++VG L+GKGG+
Sbjct: 161 YGAFKPSGGGSYAPPDHHSRGAYSESAGHSSHRMFVEEEVVFKLLCRHDKVGSLIGKGGS 220
Query: 299 IISEMRKVTGTSIRII-----SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
++ ++ TG SI+I+ SD+ + IS + Q + S ++AV V RL +
Sbjct: 221 VVRALQNETGASIQIVEAGPDSDERVVVISAQETSEQ---KHSPAQEAVIRVHCRLTEIG 277
Query: 354 F 354
F
Sbjct: 278 F 278
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 119/170 (70%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++C N+ VG++IGKGG+ IRALQSE GA I + + +ER+I ++A E E
Sbjct: 23 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSE 82
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+SPAQ AV+ V SR+ SE +D SS V ARL+V S +GCLLGKGG+II+E
Sbjct: 83 MMHSPAQDAVLRVHSRI----SESSMDKSS----AVTARLLVPSQHIGCLLGKGGSIIAE 134
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MRK+TG IRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 135 MRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 184
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 121/170 (71%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++ N+ VG++IGKGG+ IRALQSE GA I + + + DER++ +TA E +
Sbjct: 247 EQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSD 306
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+SPAQ AVV V+SR+ SE +D SS+ ARL+V S +GCLLGKGG+IISE
Sbjct: 307 MLHSPAQDAVVRVYSRI----SEASIDRSSH----TPARLLVPSQHIGCLLGKGGSIISE 358
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MRK+TG +IRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 359 MRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 408
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 226 PECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL-LVNARLVV 284
P DE ++ ++ + P + A +A V +EG G + + V R++
Sbjct: 60 PVGDEAVLVISGPDTPAA----AVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLA 115
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISD--QLLKCISENDRVVQISGEFSKVKDAV 342
A QVGC+LGKGG + MR+ G IR+ + QL D ++ ISG FS+V+ A+
Sbjct: 116 AGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKAL 175
Query: 343 YNVTGRLRDNHFSGTLN 359
V+ L+DN T N
Sbjct: 176 LAVSTCLQDNPRPDTHN 192
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 121/170 (71%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++ N+ VG++IGKGG+ IRALQSE GA I + + + DER++ +TA E +
Sbjct: 247 EQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSD 306
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+SPAQ AVV V+SR+ SE +D SS+ ARL+V S +GCLLGKGG+IISE
Sbjct: 307 MLHSPAQDAVVRVYSRI----SEASIDRSSH----TPARLLVPSQHIGCLLGKGGSIISE 358
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MRK+TG +IRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 359 MRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 408
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 226 PECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL-LVNARLVV 284
P DE ++ ++ + P + A +A V +EG G + + V R++
Sbjct: 60 PVGDEAVLVISGPDTPAA----AVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLA 115
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISD--QLLKCISENDRVVQISGEFSKVKDAV 342
A QVGC+LGKGG + MR+ G IR+ + QL D ++ ISG FS+V+ A+
Sbjct: 116 AGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKAL 175
Query: 343 YNVTGRLRDNHFSGTLNTARTR 364
V+ L+DN T N R
Sbjct: 176 LAVSTCLQDNPRPDTHNIPIGR 197
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 119/170 (70%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++C N+ VG++IGKGG+ IRALQSE GA I + + +ER+I ++A E E
Sbjct: 234 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSE 293
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+SPAQ AV+ V SR+ SE +D SS V ARL+V S +GCLLGKGG+II+E
Sbjct: 294 MMHSPAQDAVLRVHSRI----SESSMDKSS----AVTARLLVPSQHIGCLLGKGGSIIAE 345
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MRK+TG IRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 346 MRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 395
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 119/170 (70%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+QE+ FR++C N+ VG++IGKGG+ IRALQSE GA I + + +ER+I ++A E E
Sbjct: 242 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSE 301
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+SPAQ AV+ V SR+ SE +D SS V ARL+V S +GCLLGKGG+II+E
Sbjct: 302 MMHSPAQDAVLRVHSRI----SESSMDKSS----AVTARLLVPSQHIGCLLGKGGSIIAE 353
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
MRK+TG IRI ++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 354 MRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 403
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS 246
+ RILC + + A+ G R L + P DE +++++ + P
Sbjct: 37 TLRILCPSSRASALRGAS----RDLHVD---------QPPVGDEAVLSISGPDAPAV--- 80
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A +A V + G G + G+ V R++ AS QVGC+LGKGG + MR+
Sbjct: 81 -AVRAWERVVGHRVGGDEAAGEEEREVPGV-VGCRMLAASGQVGCVLGKGGKTVERMRQE 138
Query: 307 TGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
+G IR+ DQL + D ++ ISG FS V+ A+ VT L+DN N R
Sbjct: 139 SGAQIRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDASNFPPGR 198
Query: 365 STSSVLTETSPYSR 378
P+S+
Sbjct: 199 FGPPGPVGIDPHSQ 212
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 124/172 (72%), Gaps = 8/172 (4%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+++V F++LC ++KVG++IGKGG+++RALQ+E GA I + P+ DER++ ++A E E
Sbjct: 191 EEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSE 250
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
++SPAQ+AV+ V RL +E G + S+ V A+L+V S QVGCLLGKGG +ISE
Sbjct: 251 QKHSPAQEAVIRVHCRL----TEIGFEPSA----AVVAKLLVRSPQVGCLLGKGGLVISE 302
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR+VTG SIRI S + +K IS+N+ VVQ+ G V+DA++++T R+R+ F
Sbjct: 303 MRRVTGASIRIFSKEQIKYISQNEEVVQVIGSLQSVQDALFHITSRIRETIF 354
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FRI+C K V GG GA I V + +ER++ + E S
Sbjct: 21 FRIVCPAAKTEDVATIGGD---------GAKILV-EDLVSAEERVVVIVGEE------SA 64
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
AQ A+V VF R ++ K V+ +LV S QVGC+LG+GG I+ ++R+ T
Sbjct: 65 AQVALVRVFERTVD---------EETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDT 115
Query: 308 GTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G IR++ DQ + +QI+G F VK AV +V+ DN+
Sbjct: 116 GAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKKAVLSVSACFYDNN 162
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 48/244 (19%)
Query: 141 DILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAV 200
D++S V+ S + V+ VR T+D T+ VS +++ + +VG V
Sbjct: 47 DLVSAEERVVVIVGEESAAQVALVRVFE------RTVDEETKNSTVSCKLVAPSYQVGCV 100
Query: 201 IGKGGTIIRALQSEAGAFISVGATMPE--------CDERLITVTASEGPESRYSPAQKAV 252
+G+GG I+ ++ + GA I V +P+ E I +T + + +KAV
Sbjct: 101 LGRGGKIVEKIRQDTGAHIRV---LPKDQPPLPPPPGEEFIQITGN------FGAVKKAV 151
Query: 253 VLVFSRLIEGTSE--KGLD------------FSSNKGLL---VNARLVVASNQVGCLLGK 295
+ V + + S K LD SS++ L V +L+ +VG L+GK
Sbjct: 152 LSVSACFYDNNSGAFKPLDHHSRGCYSESAGHSSHRMFLEEDVVFKLLCHHEKVGSLIGK 211
Query: 296 GGTIISEMRKVTGTSIRII-----SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
GG+++ ++ TG SI+I+ SD+ + IS + Q + S ++AV V RL
Sbjct: 212 GGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQ---KHSPAQEAVIRVHCRLT 268
Query: 351 DNHF 354
+ F
Sbjct: 269 EIGF 272
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 124/178 (69%), Gaps = 7/178 (3%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D+ +Q+V +ILCS +++G VIG G IR LQSE GAFI++G+ +CDE L T+TA
Sbjct: 267 DSEDNKQQVVLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTITA 326
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL--VNARLVVASNQVGCLLGK 295
SE P ++ SP+Q+A+VLVFS++ E T+ K LD GL + ARLVV SNQ+ CL+G+
Sbjct: 327 SEDPNAKNSPSQRALVLVFSKMYENTTAKVLD----SGLTSSITARLVVRSNQINCLMGE 382
Query: 296 GGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G I S +++ TG I +++ +Q KC+SEN+++VQISG F VK+A+ VT LR++
Sbjct: 383 EGHIKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQISGAFPNVKEAINQVTSMLRED 440
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 33/189 (17%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V FRIL +VG VIGK G +IR L+ + I V + R+IT+ A G SR
Sbjct: 24 VLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTSRV 83
Query: 246 ------------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR 281
S AQ A++ VF L + F ++ V++R
Sbjct: 84 KLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEAL-------NVRFGTSS--TVSSR 134
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L++ + V ++GKGG ++ +RK TG ++ I L C +D +V+I G VK
Sbjct: 135 LLMEACHVVTVIGKGGELMEMIRKETGCNVEICQYNLPSCADPDDVMVKIEGNVFAVKKV 194
Query: 342 VYNVTGRLR 350
+ +++ RL+
Sbjct: 195 LVSISSRLQ 203
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 136/224 (60%), Gaps = 19/224 (8%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG-- 240
++EV F++LC +KVG++IGKGG+IIR LQSE GA I + P+ DER++ ++A E
Sbjct: 421 EEEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACT 480
Query: 241 ---PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
E ++SPAQ AV+ V R+ E + F G V ARL+V S Q+GCLLGKGG
Sbjct: 481 LTNXEQKHSPAQDAVIRVHCRIAE------IGF--EPGAAVVARLLVHSQQIGCLLGKGG 532
Query: 298 TIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF-- 354
IISEMR+ TG SIRI + +Q+ KC S+ND +VQ+ G V+DA++ +T R+R+ F
Sbjct: 533 IIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRETIFPL 592
Query: 355 SGTLNTARTRSTSSVLTETSP--YSRLKDPASFGVHSS-VAVSH 395
+++ S E P + DPAS G +SS V V H
Sbjct: 593 KPSISNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPH 636
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 36/190 (18%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA- 237
A + +V FRILC K G VIGKGG IIR + + GA I + ++ CDER+I + A
Sbjct: 49 AXAAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVAD 108
Query: 238 ----------------SEGPES----------------RYSPAQKAVVLVFSRL--IEGT 263
++G ES SPAQ+A+V VF R+ ++
Sbjct: 109 AVKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEE 168
Query: 264 SEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCI 322
E+ + V RL+ SNQVGC+LG+GG I+ ++R+ +G IR++ D + C
Sbjct: 169 REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACA 228
Query: 323 SENDRVVQIS 332
S D ++Q S
Sbjct: 229 SPGDELIQGS 238
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 112/159 (70%), Gaps = 9/159 (5%)
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVV 253
N+ VG++IGKGG+ IRALQSE GA I + + + DER++ ++A E + +SPAQ AVV
Sbjct: 5 NEMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVV 64
Query: 254 LVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
V+SR+ SE +D SS ARL+V S +GCLLGKGG+II+EMRK+TG SIRI
Sbjct: 65 RVYSRI----SEASMDRSSP----TPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRI 116
Query: 314 I-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
++Q+ +C ND +VQ++G F ++DA+ ++TGR+RD
Sbjct: 117 FGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 155
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 119/192 (61%), Gaps = 9/192 (4%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++FR+LC N++VG VIGKGGTII+ L+ E G I V + + ++R+I ++ P+ R
Sbjct: 324 LTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVISGLAHPDDRI 383
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S Q AV+ V +R+ SNK + ARL+V+SNQ+GCLLGKGG I+SEMRK
Sbjct: 384 SAPQDAVIRVQTRIAMAI--------SNKEKAIIARLLVSSNQIGCLLGKGGAIMSEMRK 435
Query: 306 VTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
+G IRI+ DQ+ C SE++ VVQI+GEF VK+A+ +T RLR + F +
Sbjct: 436 SSGAYIRILGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRLRHHFFQNLFPSMDHL 495
Query: 365 STSSVLTETSPY 376
S + L + P+
Sbjct: 496 SNPAFLDQVPPF 507
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 47/214 (21%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE------ 239
V FRILC K+G V G+GG +I ++ E GA + V +P CDE++I +T S+
Sbjct: 45 VVFRILCPAPKIGTVTGEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVS 104
Query: 240 ---------------------------------------GPESRYSPAQKAVVLVFSRLI 260
G S QKA++LV ++
Sbjct: 105 IEQSKKDGDEEANVAEESDNKNDGNEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMF 164
Query: 261 EGTS-EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQL 318
E G D +NK RL+V S+QVGCLLGKGG++I +M +G IRI D+L
Sbjct: 165 EADPVTDGGDEENNKPSTFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRL 224
Query: 319 LKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
C S +D +V+I+GE V+ A+ +V+ +L +N
Sbjct: 225 PICSSVSDELVEITGEIDAVRKALQSVSKQLLEN 258
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 134/217 (61%), Gaps = 7/217 (3%)
Query: 137 DLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDK 196
D + ++ NS+LT+ SI + S+ + D++ + EV FR+LCSN+
Sbjct: 239 DPNAELFPHLNSLLTSMEGLSI------YERTTNSNETSNRDSKGAEHEVVFRLLCSNNV 292
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
G+VIGK G I+RAL+S+ GA I A + E ER++T++A E ES SPAQ AV+LVF
Sbjct: 293 AGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAVESLESCNSPAQDAVILVF 352
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-S 315
+R+IE KG S+ V ARL+VA++ V C G G +ISE+R+VTG I+I+
Sbjct: 353 ARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQILHG 412
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+ + S+ D VVQI+GE+ V++A+Y +T R+RDN
Sbjct: 413 ESVPNGASDEDVVVQITGEYRCVQNALYKITSRIRDN 449
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 100/177 (56%), Gaps = 12/177 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------ 238
+++FR++C VG +IG G+I+ L+ E G I ++ ++R+I V S
Sbjct: 40 QIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKG 99
Query: 239 ----EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
+G E S AQ+AVV VF R+ + +EKG++ + V ++L+ ++Q+G ++G
Sbjct: 100 LLLGDGGEVEVSSAQEAVVRVFERVWDLEAEKGVNSNRAVNGEVFSKLLAHTSQIGAVVG 159
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
KGG I+ +R TG IR+ +C ++++ +VQI+G VK A+ +V+ L+D
Sbjct: 160 KGGKNITAIRNNTGAKIRVFPPP--QCATKDEELVQITGGILAVKKALISVSHCLQD 214
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC---DERLITVT 236
R EV ++L ++GAV+GKGG I A+++ GA I V P+C DE L+ +T
Sbjct: 137 RAVNGEVFSKLLAHTSQIGAVVGKGGKNITAIRNNTGAKIRV-FPPPQCATKDEELVQIT 195
Query: 237 A 237
Sbjct: 196 G 196
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 112/173 (64%), Gaps = 10/173 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+++V FR+LC DKVG++IGKGGT++RALQ+E GA I + T P+ DERL+ ++A E E
Sbjct: 341 EEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDT-PDLDERLVVISARETLE 399
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
YSPAQ+AV+ R+ E G V ARL+V Q+G L+G+GG II++
Sbjct: 400 QTYSPAQEAVIRAHCRIAE--------IGYEPGAAVVARLLVHGQQIGYLVGRGGHIIND 451
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR+ TGTSI+I DQ+ +D VVQ+ G V+DA++++T R+RD F
Sbjct: 452 MRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFF 504
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 57/241 (23%)
Query: 161 VSAVRPLSLESD---RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGA 217
VS P +L D R A + + + FR+LC KV +I+R L+ GA
Sbjct: 40 VSTTAPATLGLDTTTRDAPVLKPSSPSDTLFRLLCPASKVS-------SILRHLRDIPGA 92
Query: 218 FISVGATMPECDERLITVTASE------------------------------GPESRYSP 247
I V +P C+E ++ + A G S
Sbjct: 93 RIHVDEPLPSCEECVLVILAGSPSKPAHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQ 152
Query: 248 AQKAVVLVFS---RLIEGTSE------KGLDFSSNKGL-------LVNARLVVASNQVGC 291
AQ+A++ F R+ E + E K D + N + LV RL+ S+QVG
Sbjct: 153 AQQALLRTFESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGR 212
Query: 292 LLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+LG+GG + ++R+ + ++I DQ C S D ++QISG FS V A+ +V+ L+
Sbjct: 213 VLGRGGKTVEKIRQESMAHVKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQ 272
Query: 351 D 351
D
Sbjct: 273 D 273
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 112/173 (64%), Gaps = 10/173 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+++V FR+LC DKVG++IGKGGT++RALQ+E GA I + T P+ DERL+ ++A E E
Sbjct: 341 EEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDT-PDLDERLVVISARETLE 399
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
YSPAQ+AV+ R+ E G V ARL+V Q+G L+G+GG II++
Sbjct: 400 QTYSPAQEAVIRAHCRIAE--------IGYEPGAAVVARLLVHGQQIGYLVGRGGHIIND 451
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR+ TGTSI+I DQ+ +D VVQ+ G V+DA++++T R+RD F
Sbjct: 452 MRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFF 504
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 57/241 (23%)
Query: 161 VSAVRPLSLESD---RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGA 217
VS P +L D R A + + + FR+LC KV +I+R L+ GA
Sbjct: 40 VSTTAPATLGLDTTTRDAPVLKPSSPSDTLFRLLCPASKVS-------SILRHLRDIPGA 92
Query: 218 FISVGATMPECDERLITVTASE------------------------------GPESRYSP 247
I V +P C+E ++ + A G S
Sbjct: 93 RIHVDEPLPSCEECVLVILAGSPSKPTHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQ 152
Query: 248 AQKAVVLVFS---RLIEGTSE------KGLDFSSNKGL-------LVNARLVVASNQVGC 291
AQ+A++ F R+ E + E K D + N + LV RL+ S+QVG
Sbjct: 153 AQQALLRTFESIVRMNEDSGENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGR 212
Query: 292 LLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+LG+GG + ++R+ + ++I DQ C S D ++QISG FS V A+ +V+ L+
Sbjct: 213 VLGRGGKTVEKIRQESMAHVKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQ 272
Query: 351 D 351
D
Sbjct: 273 D 273
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 130/217 (59%), Gaps = 12/217 (5%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
+S+R+LC ++VG VIGKGG I++ LQ + G I V + ++R+I V P+ R
Sbjct: 338 LSYRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDRI 397
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
SP Q AV V +R+++ ++ S + L+ AR +V+SNQ+GCLLGKGG+II+EMRK
Sbjct: 398 SPVQDAVFRVQARIVKAAAD-----SKEQNLV--ARFLVSSNQIGCLLGKGGSIIAEMRK 450
Query: 306 VTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
TG IRI+ +Q+ KC E++ VVQI+GE V+DA++ +T RLR + F + +
Sbjct: 451 STGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDAMFQITTRLRHHFFRDAFPSVNSH 510
Query: 365 STSSV---LTETSPYSRLKDPASFGVHSSVAVS-HDF 397
S + L Y ++ + G++SS+ S H F
Sbjct: 511 SNPAFIDRLPSFPSYFGRRELSPPGIYSSLGPSFHKF 547
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 47/212 (22%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE-----GPE 242
FR+L ++ +++G+ G + ++ E G I V T+P CDER+ + S PE
Sbjct: 48 FRVLFPVSRIDSLVGRDGDGLSKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPE 107
Query: 243 SR----------------------------------------YSPAQKAVVLVFSRLIEG 262
+ +S +KA+ LV ++ +
Sbjct: 108 KKSKEDNKNSEVEENDGDIAKLKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDE 167
Query: 263 TSE-KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLK 320
E G D +K RL+V S+QVGCLLGKGG+++ +M +G IRI+ D+L
Sbjct: 168 EPEADGTDVEGDKLPTFILRLLVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPP 227
Query: 321 CISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
++ N +VQISG VK A+ V +L +N
Sbjct: 228 FVATNVELVQISGGIDVVKKALELVFQQLIEN 259
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 128 GAVSQEILPDLHVDIL-------SQRNSVLTTAPSSSISYVSAVRPLSLE-SDRVATLDA 179
GA+ + + D DI S+ +L P+ +S V+ R+ A
Sbjct: 357 GAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAAA 416
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC---DERLIT 234
+++Q + R L S++++G ++GKGG+II ++ GA+I + +P+C DE ++
Sbjct: 417 DSKEQNLVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQ 476
Query: 235 VTASEGPESRYSPAQKAVVLVFSRL 259
+ PE+ Q A+ + +RL
Sbjct: 477 INGE--PET----VQDAMFQITTRL 495
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 157/295 (53%), Gaps = 24/295 (8%)
Query: 85 EILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILS 144
E++ ++L+S Q++L P H S A S FG H +
Sbjct: 238 EVVRKALQSVSQQLLENP------PRDHESLSAKSTGPSSHSFGQFPP------HNHSFA 285
Query: 145 QRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQ--QQEVSFRILCSNDKVGAVIG 202
+ T P ++ SA P + A + RT+ Q+ ++FR+LC ++VG +IG
Sbjct: 286 AQGEPFATGPHDISAFHSA--PPLIPKFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIG 343
Query: 203 KGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEG 262
KGG II+ +Q E + I V P+ ++ +I ++ PE R SP Q+AV V +R+
Sbjct: 344 KGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIA-- 401
Query: 263 TSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKC 321
K + +++ +L AR +V+SNQ+GCLLGKGG+II+EMRK +G IRI+ D++ KC
Sbjct: 402 ---KPIPDANDHTML--ARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKC 456
Query: 322 ISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPY 376
SE++ V+Q++GE V +A+ +T RL+ + F + + S S L + P+
Sbjct: 457 ASEDEEVIQVNGEIEAVHEALLQITTRLKHHFFRDSYPSVNYPSNSPFLDQLPPF 511
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 69/299 (23%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V FR+LC ++G+VIGKGG+II ++ E G + + +P CDER+IT++ S+ Y
Sbjct: 34 VVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKIEEAVPGCDERVITISGSDKEAEEY 93
Query: 246 SPAQ----------------------------------------------------KAVV 253
+ Q KA+
Sbjct: 94 TAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNEDKEEKDAVPVEDSKSEKGNSAIWKAIS 153
Query: 254 LVFSRLIEGTSE--KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
LVF R++EG E +G D SNK RL++ + QVGC+LGKGG++I M +G I
Sbjct: 154 LVFERMVEGVEETTEG-DEESNKSSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQI 212
Query: 312 RII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN----HFSGTLNTARTRST 366
RI+ D++ C S D +VQISG V+ A+ +V+ +L +N H S L+ T +
Sbjct: 213 RILPKDKVPVCASAFDEIVQISGSVEVVRKALQSVSQQLLENPPRDHES--LSAKSTGPS 270
Query: 367 SSVLTETSP----YSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSSSEGQLRCWKRL 421
S + P ++ +P + G H +S S PPL + ++ G+ R + +
Sbjct: 271 SHSFGQFPPHNHSFAAQGEPFATGPHD---ISAFHSAPPLIPKFHEAAIHGRTRPLQEM 326
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 116/173 (67%), Gaps = 8/173 (4%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+ E+ FR+LC +DK+G+VIGKGG+II L+ + GA I + +P DER+I V+A E P
Sbjct: 257 ENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPG 316
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+SPA +A++ V SR+ T+E G D K ++ RL+V +NQ+GCLLGKGG+II +
Sbjct: 317 DSFSPALEAMIQVQSRI---TAEMGGD----KDGIITTRLLVPTNQIGCLLGKGGSIIED 369
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR+ T +IR++ D L +C + D +VQI G+ + ++A++ V RLR+N F
Sbjct: 370 MRRATRANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQVISRLRNNAF 422
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 138/257 (53%), Gaps = 23/257 (8%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------ 238
+V FRILC K+G+VIGKGG+II+ L+ E+GA I + +P DER+I ++++
Sbjct: 2 DVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDR 61
Query: 239 ----EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNK---GLLVNARLVVASNQVGC 291
+G +PAQ+A+ V +R+I G+D S + V RL+V +NQ+GC
Sbjct: 62 GRGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGC 121
Query: 292 LLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
LLGKGG II +MR+ TG IR++ DQL C D +VQ+SG+ S +K A+ ++ RL+
Sbjct: 122 LLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARLQ 181
Query: 351 DNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDG-NWS 409
+ N R R S + + + D + + S H F P +G +W+
Sbjct: 182 E-------NPPRDRPQSYAAPAPA-FVPVTDYLAKDSYRSKGTGHVFGLGPEPLEGRSWT 233
Query: 410 SSEGQLRCWKRLESRSE 426
S G L ++ RS+
Sbjct: 234 ISSGNLSLDRQDNRRSK 250
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 117/177 (66%), Gaps = 9/177 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
++EVSFR+LC DKVG++IGKGG ++RALQ+E+GA I V + +ER+I ++A E E
Sbjct: 274 EEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLE 333
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
R+S AQ V+ V +R++E + F + ++ ARL+V S +G LLGKGG +ISE
Sbjct: 334 RRHSLAQDGVMRVHNRIVE------IGFEPSAAVV--ARLLVHSPYIGRLLGKGGHLISE 385
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
MR+ TG SIR+ + DQ K S++D +VQ+ G V+DA++ + RLR+ F G L
Sbjct: 386 MRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRL 442
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 46/215 (21%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP-ECDERLITVTA-- 237
T + V FR+LC + GA+IGKGG++IR LQS G+ I V +P +ER++ + A
Sbjct: 14 TAAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPS 73
Query: 238 -----------SEGP---------------------ESRYSPAQKAVVLVFSRLIEGTSE 265
SE P E S AQ A++ V R++ G
Sbjct: 74 GKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDA 133
Query: 266 -----KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLL 319
GLD ++ L R++V NQV L+ KGG +I +R+ +G +RI S DQ+
Sbjct: 134 ASVDGDGLDKGESESL---CRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIP 190
Query: 320 KCISENDRVVQ--ISGEFSKVKDAVYNVTGRLRDN 352
C D V+Q I+G+FS VK A+ +T L+++
Sbjct: 191 PCAFPGDVVIQMKITGKFSSVKKALLLITNCLQES 225
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 133/227 (58%), Gaps = 11/227 (4%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + ++FR+LC ++ VG +IGKGG+II+ LQ E + I V +P ++ +I ++
Sbjct: 306 RPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPA 365
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P+ R SP Q+A+ V +R+ S LD + L AR++V+S +GCLLGKGG+I
Sbjct: 366 HPDDRISPVQEAIFRVQNRI----SRAMLDSKEHSML---ARVIVSSKHIGCLLGKGGSI 418
Query: 300 ISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
I+EMR ++G IR++ D+ KC+SE+D V+Q+SG V DA+ +T RLR+N F
Sbjct: 419 IAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFRDAF 478
Query: 359 NTARTRSTSSVLTETSPYSRL---KDPASFGVHSSVAVSHDFSQPPL 402
+A S S+ L + SP+ + + G++S + H + PL
Sbjct: 479 PSANFPSNSAFLDQHSPFPPYLGRRGLSPPGMYSDLGPRHPHADFPL 525
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Query: 250 KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
+AV+LVF R+ E ++G D S KG RL++ SNQVGC+LGKGG++I M +G
Sbjct: 142 RAVMLVFERVAE---DEGGD-ESKKGYF-GLRLLILSNQVGCILGKGGSVIKRMSAESGA 196
Query: 310 SIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
IRI+ +++ C S++D +VQI+G V+ A+ +V +L +N
Sbjct: 197 QIRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVEN 240
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 13/107 (12%)
Query: 164 VRPLSLESDRVATLDARTQQQEVSF--RILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+R + L +RVA + + ++ F R+L +++VG ++GKGG++I+ + +E+GA I +
Sbjct: 141 MRAVMLVFERVAEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRI 200
Query: 222 --GATMPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRLIEGT 263
+P C + L+ +T ++A+ VF +L+E +
Sbjct: 201 LPKEEIPACASDSDELVQITGG------VEVVRRALQSVFQQLVENS 241
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 152/266 (57%), Gaps = 19/266 (7%)
Query: 137 DLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDK 196
D + ++ + NS+LT+ SI + S+ + D++ + EV FR+LCSN+
Sbjct: 248 DPNAELFPRLNSLLTSMEGLSI------YERTTNSNESSNRDSKGGEHEVVFRLLCSNNV 301
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
G+VIGK G I+RAL+S+ GA I A + E ER++T++A E ES SPAQ AV+LVF
Sbjct: 302 AGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESLESCNSPAQDAVILVF 361
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-S 315
+R+IE KG S+ V ARL+VA++ V G G +I E+R+VTG I+I+
Sbjct: 362 ARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVILELREVTGADIQILHG 421
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG-TLNTARTRSTSSVLTE-- 372
+ + S++D VVQI+GE+ V++A+Y +T R+RDN + AR +S V +
Sbjct: 422 ESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNLSPNEAVTEARPKSNWKVNKDPV 481
Query: 373 -TSPYSRLKD--------PASFGVHS 389
P+SR K P + GVH+
Sbjct: 482 KGKPFSRGKSAFPSGRFLPRNAGVHA 507
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------ 238
+++FR++C VG +IG G+I+ L+ E I ++ ++R+I V S
Sbjct: 49 QIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKG 108
Query: 239 ----EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
+G E S AQ+A+V VF R+ +EKG++ + V ++L+ ++Q+G ++G
Sbjct: 109 LQLGDGGEVEVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFSKLLAHTSQIGAVVG 168
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
KGG I+ +R TG IR+ +C ++++ +V I+G VK A+ +V+ L+D
Sbjct: 169 KGGKNITAIRNSTGAKIRVCPPP--QCATKDEELVLITGGILAVKKALISVSHCLQD 223
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 104/253 (41%), Gaps = 64/253 (25%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC---DERLITVT 236
R EV ++L ++GAV+GKGG I A+++ GA I V P+C DE L+ +T
Sbjct: 146 RAVNSEVFSKLLAHTSQIGAVVGKGGKNITAIRNSTGAKIRV-CPPPQCATKDEELVLIT 204
Query: 237 AS----------------EGPESRYSPAQKAVVLV--------------FSRLIE-GTSE 265
+ P P ++ V F RL TS
Sbjct: 205 GGILAVKKALISVSHCLQDCPPLCKVPVSSSIPTVSSFDRSSSDPNAELFPRLNSLLTSM 264
Query: 266 KGLDF---------SSNKGLL-----VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+GL SSN+ V RL+ ++N G ++GK G I+ + TG SI
Sbjct: 265 EGLSIYERTTNSNESSNRDSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASI 324
Query: 312 RIISDQLLKCISEN-DRVVQISG------EFSKVKDAVYNVTGRLRDNHFS-GTLNTART 363
+ +SE+ +R+V IS S +DAV V R+ ++H G L +
Sbjct: 325 IFAAP-----LSEHAERIVTISAIESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSM 379
Query: 364 RS--TSSVLTETS 374
S T+ +L TS
Sbjct: 380 ESPVTARLLVATS 392
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 9/186 (4%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V + ++EV+FR+LC DKVG++IGKGG ++RALQ+E+GA I V + +ER+I
Sbjct: 264 VGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERII 323
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
++A E E R+S AQ V+ V +R++E + F + ++ ARL+V S +G LL
Sbjct: 324 VISARENLERRHSLAQDGVMRVHNRIVE------IGFEPSAAVV--ARLLVHSPYIGRLL 375
Query: 294 GKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
GKGG +ISEMR+ TG SIR+ + DQ K S++D +VQ+ G V+DA++ + RLR+
Sbjct: 376 GKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREA 435
Query: 353 HFSGTL 358
F G L
Sbjct: 436 MFPGRL 441
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 44/213 (20%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP-ECDERLITVTA-- 237
T + V FR+LC + GA+IGKGG++IR LQS G+ I V +P +ER++ + A
Sbjct: 14 TAAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPS 73
Query: 238 -----------SEGP---------------------ESRYSPAQKAVVLVFSRLIEGTSE 265
SE P E S AQ A++ VF R++ G
Sbjct: 74 GKKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDA 133
Query: 266 KG-----LDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLL 319
LD ++GL R++V NQV L+ KGG +I ++R+ +G +RI S DQ+
Sbjct: 134 ATVDGDELDKGESEGL---CRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIP 190
Query: 320 KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
C D V+Q++G+FS VK A+ VT L+++
Sbjct: 191 PCAFPGDVVIQMNGKFSSVKKALLLVTNCLQES 223
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 20/293 (6%)
Query: 85 EILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILS 144
E++ ++L+S Q++L P H S A S FG H S
Sbjct: 236 EVVRKALQSVSQQLLENP------PRDHDSLSAKSTGPSSHSFGQFPP------HNRSFS 283
Query: 145 QRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKG 204
+ + P ++ SA + + R Q+ ++FR+LC ++VG +IGKG
Sbjct: 284 AQGEPFASGPHDISAFHSAAPLIPKFHEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGKG 343
Query: 205 GTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTS 264
G II+ +Q E + I V P+ ++ +I ++ PE R SP Q+AV V +R+ +
Sbjct: 344 GAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIAK--- 400
Query: 265 EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCIS 323
K ++ AR +V+S Q+GCLLGKGG+II+EMRK +G IRI+ D++ KC S
Sbjct: 401 ----PIPDAKDHIMLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCAS 456
Query: 324 ENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPY 376
E++ V+Q++GE V DA+ +T RL+ + F + + S S L + P+
Sbjct: 457 EDEEVIQVNGEIEAVHDALLQITTRLKHHCFRDSYPSVNYPSNSPFLDQLPPF 509
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 137/295 (46%), Gaps = 63/295 (21%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA-------- 237
V FR+LC ++G VIGKGG+II ++ E G + + +P CDER+IT++
Sbjct: 34 VVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRIEEAVPGCDERVITISGSEKETEED 93
Query: 238 ---------------SEGP---------------------------ESRYSPAQKAVVLV 255
SEG E S KA+ LV
Sbjct: 94 NTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAISLV 153
Query: 256 FSRLIEGTSE--KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
F R++EG E +G D SNK RL++ + QVGC+LGKGG++I M +G IRI
Sbjct: 154 FERMVEGVEETTEG-DEESNKPSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRI 212
Query: 314 I-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN--HFSGTLNTARTRSTSSVL 370
+ D+L C S +D +VQISG V+ A+ +V+ +L +N +L+ T +S
Sbjct: 213 LPKDKLPACASASDEIVQISGSVEVVRKALQSVSQQLLENPPRDHDSLSAKSTGPSSHSF 272
Query: 371 TETSPYSR----LKDPASFGVHSSVAVSHDFSQPPLTQDGNWSSSEGQLRCWKRL 421
+ P++R +P + G H +S S PL + ++ G++R + +
Sbjct: 273 GQFPPHNRSFSAQGEPFASGPHD---ISAFHSAAPLIPKFHEAAIHGRMRPLQEM 324
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 135/224 (60%), Gaps = 20/224 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+ +SFR+LC DKVG++IGKGG I++ +Q++ G I V T+P+ D+R+I+++ P
Sbjct: 376 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSD 435
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ A++ V +++ +S+K K RL+V+ NQVGC+LGKGG+II+EM
Sbjct: 436 GISPAQNAILHVQRKIMLPSSDK-------KEGPATCRLIVSGNQVGCVLGKGGSIIAEM 488
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
RK++G I ++S D++ + + E+D V+QI+G +++A+ VT RLR++ F R
Sbjct: 489 RKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNHLF-------R 541
Query: 363 TRSTSSVLTETSPYSRLKDP--ASF-GVHSSVAVSH-DFSQPPL 402
R + P+ L DP F G H S ++ H DF PL
Sbjct: 542 DRMPAVGPNMRPPFGLL-DPQFGPFSGNHESSSLFHKDFMGRPL 584
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 227 ECDERLITVTASEGPESRYSPAQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E D+ L+ PE A KAV LVF R+ EG +E G +S V+ R++V
Sbjct: 182 EKDDPLVAKVTKLEPERVIPLALKAVSLVFDRIFATEGNNETG--NASAASAPVSLRMLV 239
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYN 344
+Q G LLGKGG+++ +M G IR++ D L C ND++ QI+GE V+ +
Sbjct: 240 LYSQAGWLLGKGGSVVKQMAADNGCEIRVLKDNLPSCALLNDKLCQITGEIDSVRKGLNA 299
Query: 345 VT 346
V+
Sbjct: 300 VS 301
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
FRILC K G VIGKGG II ++ E I V P CDER+I +TA+
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITAA 97
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 138/240 (57%), Gaps = 20/240 (8%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
S + P D + A + ++FR+LCS+DKVG++IGKGG I+ +Q + G I +
Sbjct: 371 SNIPPFPAFPDALMHSHASVPPEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKI 430
Query: 222 GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR 281
T+P+ ++R+I ++ P SPAQ A++ V R+ T ++NK +R
Sbjct: 431 LETVPKSEDRVIVISGPAHPGDGISPAQNAILHVQRRITPPT-------ANNKEGAAISR 483
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKD 340
L+V+ NQVGCLLGKGG+II+EMRK++ I ++S D++ K + E+D VVQI+G+ +++
Sbjct: 484 LIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQE 543
Query: 341 AVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQP 400
A+ +T RLR++ F R R + P+ L DP FG + A SH+ + P
Sbjct: 544 ALMQITARLRNHLF-------RDRMAAMGPNMQPPFGSL-DP-QFG---AFAGSHESTSP 591
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
RILC +K G VIGKGG II ++ E G I V +P CDER+I +T +E
Sbjct: 47 IRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITE 98
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 223 ATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNA 280
A+ E D+ + PE A++ VF R+ E +E G D S + V+
Sbjct: 177 ASKEEKDDPSVAKDTKAEPERVLLSPMNAILHVFDRIFITEIGNESG-DPSGER-TPVSF 234
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
RL+V +QVG LLG G++I +M +G IR+ ++L C D + QI+GE V+
Sbjct: 235 RLLVLDSQVGWLLGNRGSVIKQMSADSGCEIRVSKEKLPLCALLKDELCQITGELDSVRK 294
Query: 341 AVYNVT 346
+ V
Sbjct: 295 GLNAVA 300
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 118/172 (68%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+ +SFR+LC DKVG++IGKGG I++ +Q + G I V T+P+ ++R+I+++ P
Sbjct: 386 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSD 445
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ A++ V +++ TS+K +G + RL+V++NQVGC+LGKGG+II+EM
Sbjct: 446 GISPAQNAILHVQRKIMLPTSDK------KEGPAI-CRLIVSANQVGCVLGKGGSIIAEM 498
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
RK++G I ++S D++ + + E+D VVQISG +++A+ +T RLR++ F
Sbjct: 499 RKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLF 550
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%)
Query: 227 ECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVAS 286
E D+ + A PE A KA+ LVF R+ +S V+ RL+V
Sbjct: 193 EKDDPFVAKVAESEPERVIPSALKAISLVFDRIFAAGDNNETGNASAASTPVSLRLLVLY 252
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
+Q G LLGKGG++I +M G IR++ D L C ND++ QI+GE V+ + V+
Sbjct: 253 SQAGWLLGKGGSVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQITGEIDSVRKGLNAVS 312
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 30/50 (60%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
FRILC K G VIGKGG II ++ E I V P CDER+I +TA
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITA 96
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 142/219 (64%), Gaps = 11/219 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++FR+LC +++VG +IGKGGTII+ LQ+E G I V +P+ ++R+I ++ S P+
Sbjct: 332 QDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPD 391
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
R SPAQ AV+ V SR++ + +K V ARL+V+S Q+GCLLGKGG II+E
Sbjct: 392 DRISPAQDAVLRVQSRIVRAIPD-------SKEKTVIARLLVSSTQIGCLLGKGGAIIAE 444
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF--SGTLN 359
MRK++G IRI+ DQ+ KC SEN+ VVQI+GEF V++A+ +T RLR +HF + ++N
Sbjct: 445 MRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVN 504
Query: 360 TARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVS-HDF 397
+ + + PY ++ + G++S++ S H F
Sbjct: 505 HPSNPAFTDQVPPFPPYLARREFSPPGMYSNLGPSFHKF 543
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 122/248 (49%), Gaps = 48/248 (19%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGP---- 241
V FR+LC K G+VIGKGGTII ++ E G + V T+ CDER++ +T S+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 242 ----------------------------------------ESRYSPAQKAVVLVFSRLIE 261
E S QKA++LVF R+ E
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 262 GTSE-KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLL 319
G SE G D SNK RL+V S+QVGCLLGKGG++I +M +G IRI+ D+L
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 320 KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN--HFSGTLNTARTRSTSSVLTETSPYS 377
C S +D +VQI+GE K A+ +++ +L +N ++T T S+S + P S
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRS 284
Query: 378 RLKDPASF 385
+ P ++
Sbjct: 285 EAQPPPNY 292
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Query: 270 FSSNKGLLVNA-----RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISE 324
+S N+ L ++ R++ +++ G ++GKGGTIIS++R+ TG +R + + + C
Sbjct: 32 YSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVR-VEETVSGC--- 87
Query: 325 NDRVVQISG 333
++RVV I+G
Sbjct: 88 DERVVLITG 96
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 142/219 (64%), Gaps = 11/219 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++FR+LC +++VG +IGKGGTII+ LQ+E G I V +P+ ++R+I ++ S P+
Sbjct: 303 QDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPD 362
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
R SPAQ AV+ V SR++ + +K V ARL+V+S Q+GCLLGKGG II+E
Sbjct: 363 DRISPAQDAVLRVQSRIVRAIPD-------SKEKTVIARLLVSSTQIGCLLGKGGAIIAE 415
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF--SGTLN 359
MRK++G IRI+ DQ+ KC SEN+ VVQI+GEF V++A+ +T RLR +HF + ++N
Sbjct: 416 MRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVN 475
Query: 360 TARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVS-HDF 397
+ + + PY ++ + G++S++ S H F
Sbjct: 476 HPSNPAFTDQVPPFPPYLARREFSPPGMYSNLGPSFHKF 514
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 122/219 (55%), Gaps = 19/219 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGP---- 241
V FR+LC K G+VIGKGGTII ++ E G + V T+ CDER++ +T S+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 242 -----------ESRYSPAQKAVVLVFSRLIEGTSE-KGLDFSSNKGLLVNARLVVASNQV 289
E S QKA++LVF R+ EG SE G D SNK RL+V S+QV
Sbjct: 105 NEQSKEDDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQV 164
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
GCLLGKGG++I +M +G IRI+ D+L C S +D +VQI+GE K A+ +++ +
Sbjct: 165 GCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQ 224
Query: 349 LRDN--HFSGTLNTARTRSTSSVLTETSPYSRLKDPASF 385
L +N ++T T S+S + P S + P ++
Sbjct: 225 LLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNY 263
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 154/256 (60%), Gaps = 19/256 (7%)
Query: 154 PSSSISYVSAVRPLSLESD-------RVATLDARTQQQEV-SFRILCSNDKVGAVIGKGG 205
P+ Y + VR S+ + + + Q++ +FR+LC +++VG +IGKGG
Sbjct: 295 PAQGAPYAAGVRDTDYHSNTPQLHKFHESGMPGXMKPQDILTFRLLCHDERVGGIIGKGG 354
Query: 206 TIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE 265
TII+ LQ+E G I V +P+ ++R+I ++ S P+ R SPAQ AV+ V SR++ +
Sbjct: 355 TIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIPD 414
Query: 266 KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISE 324
+K V ARL+V+S Q+GCLLGKGG II+EMRK++G IRI+ DQ+ KC SE
Sbjct: 415 -------SKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASE 467
Query: 325 NDRVVQISGEFSKVKDAVYNVTGRLRDNHF--SGTLNTARTRSTSSVLTETSPYSRLKDP 382
N+ VVQI+GEF V++A+ +T RLR +HF + ++N + + + PY ++
Sbjct: 468 NEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPYLARREF 527
Query: 383 ASFGVHSSVAVS-HDF 397
+ G++S++ S H F
Sbjct: 528 SPPGMYSNLGPSFHKF 543
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 122/248 (49%), Gaps = 48/248 (19%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGP---- 241
V FR+LC K G+VIGKGGTII ++ E G + V T+ CDER++ +T S+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 242 ----------------------------------------ESRYSPAQKAVVLVFSRLIE 261
E S QKA++LVF R+ E
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 262 GTSE-KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLL 319
G SE G D SNK RL+V S+QVGCLLGKGG++I +M +G IRI+ D+L
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 320 KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN--HFSGTLNTARTRSTSSVLTETSPYS 377
C S +D +VQI+GE K A+ +++ +L +N ++T T S+S + P S
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRS 284
Query: 378 RLKDPASF 385
+ P ++
Sbjct: 285 EAQPPPNY 292
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 9/69 (13%)
Query: 270 FSSNKGLLVNA-----RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISE 324
+S N+ L ++ R++ +++ G ++GKGGTIIS++R+ TG +R + + + C
Sbjct: 32 YSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVR-VEETVSGC--- 87
Query: 325 NDRVVQISG 333
++RVV I+G
Sbjct: 88 DERVVLITG 96
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S RI+C +G VIGKGGTII ++ E+GA I V ++ E D+ LITV+A E +
Sbjct: 153 KEFSLRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDD 212
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+YSP +A + RL SEK + + GL+ RL+V ++++GCLLGKGG II+E
Sbjct: 213 QYSPTIEAAI----RLQPRCSEK---IARDSGLISFTTRLLVPTSRIGCLLGKGGVIINE 265
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MRKVT +IRI+ D L K SE+D +VQISG+ KDA+ +V+ RLR N F
Sbjct: 266 MRKVTKANIRILGKDNLPKVASEDDEMVQISGDLDVAKDALTHVSRRLRANAF 318
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 269 DFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLL-KCISENDR 327
D S G V ARL+V S+Q+GC++GKGG I+ +R TG IRI+ D+ L C D
Sbjct: 4 DDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTDE 63
Query: 328 VVQISGEFSKVKDAVYNVTGRLRDN 352
+VQISGE + VK A+Y + RL +N
Sbjct: 64 LVQISGEVAVVKKALYQIATRLHEN 88
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+V+ R++ +D++G +IGKGG I++ ++SE GA I + +P C
Sbjct: 11 HQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPC 57
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 109/168 (64%), Gaps = 9/168 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ FRILC N K+G+VIG+ G+II++LQ + GA I + +P DER+I ++A+E E
Sbjct: 20 EELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISANEVLED 79
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ+A++ + S+++ D +K ++ +L++ SNQ GCLLGKGG IISEM
Sbjct: 80 NLSPAQEALLHIQSQIV--------DLGPDKDGVITTKLLIPSNQTGCLLGKGGAIISEM 131
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
RK T +IRI+ + L C ++D +VQI G+ + A+ VT RLR
Sbjct: 132 RKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLR 179
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 125/223 (56%), Gaps = 31/223 (13%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ FRILC ++K+G +IGK I+ LQ E GA I+V +P C+ER+I V+A E P+
Sbjct: 285 EELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDD 341
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ+AV + +L + E +S + V RL+V SN VGCLLGKGG IISEM
Sbjct: 342 DLSPAQEAVFHIQDKLRDDGGE-----TSER---VVTRLLVPSNHVGCLLGKGGNIISEM 393
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
R T IR++ +QL C +ND VVQ+ GE +DA+ +T RLR N + R
Sbjct: 394 RNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLY-------R 446
Query: 363 TRSTSSVLTETSPYSRLKDPAS-FGVHSSVAVSHDFSQPPLTQ 404
++ S + Y R P S FG+ + SQPP Q
Sbjct: 447 EKTDRS---DDYGYQRSTSPLSNFGLQA--------SQPPGIQ 478
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 104/203 (51%), Gaps = 38/203 (18%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE---GPESR 244
FRILC ++G+VIGKGG+II+ L+ + GA I + +P DER+I + A + G +
Sbjct: 2 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 61
Query: 245 YS-----------------------------PAQKAVVLVFSRLIEGTS-EKGLDFSS-- 272
Y PAQ A+ V SR+++ E LD S
Sbjct: 62 YPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 121
Query: 273 --NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVV 329
+ V R++V NQVGCLLGK G II +MR+ TG+ IRI+ +QL C D VV
Sbjct: 122 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 181
Query: 330 QISGEFSKVKDAVYNVTGRLRDN 352
Q+ G+ VK A+ ++ RL DN
Sbjct: 182 QVVGDRPSVKRALNAISTRLLDN 204
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 125/223 (56%), Gaps = 31/223 (13%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ FRILC ++K+G +IGK I+ LQ E GA I+V +P C+ER+I V+A E P+
Sbjct: 345 EELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDD 401
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ+AV + +L + E +S + V RL+V SN VGCLLGKGG IISEM
Sbjct: 402 DLSPAQEAVFHIQDKLRDDGGE-----TSER---VVTRLLVPSNHVGCLLGKGGNIISEM 453
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
R T IR++ +QL C +ND VVQ+ GE +DA+ +T RLR N + R
Sbjct: 454 RNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANLY-------R 506
Query: 363 TRSTSSVLTETSPYSRLKDPAS-FGVHSSVAVSHDFSQPPLTQ 404
++ S + Y R P S FG+ + SQPP Q
Sbjct: 507 EKTDRS---DDYGYQRSTSPLSNFGLQA--------SQPPGIQ 538
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 104/203 (51%), Gaps = 38/203 (18%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE---GPESR 244
FRILC ++G+VIGKGG+II+ L+ + GA I + +P DER+I + A + G +
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 245 Y-----------------------------SPAQKAVVLVFSRLIEGTS-EKGLDFSS-- 272
Y PAQ A+ V SR+++ E LD S
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 181
Query: 273 --NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVV 329
+ V R++V NQVGCLLGK G II +MR+ TG+ IRI+ +QL C D VV
Sbjct: 182 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 241
Query: 330 QISGEFSKVKDAVYNVTGRLRDN 352
Q+ G+ VK A+ ++ RL DN
Sbjct: 242 QVVGDRPSVKRALNAISTRLLDN 264
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 122/205 (59%), Gaps = 4/205 (1%)
Query: 176 TLDARTQQ-QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
T DA+++ Q+VSFR+L G +IGK G II+ ++ E GA I VGA + C ER+IT
Sbjct: 267 TGDAQSKTLQQVSFRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVIT 326
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
+ A E P+S Y Q A++L+F R++E + F LV R++V NQ GCL+G
Sbjct: 327 ICALESPDSEYHIVQSALLLIFDRMMEMETNTHSTFEKASQFLV--RVLVLKNQFGCLVG 384
Query: 295 KGGTIISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GG+II EM TG I+I+ D ++ C S + VVQI+GE +++A+ V +LR++
Sbjct: 385 LGGSIIKEMVNTTGARIQILDDTEIPACASTFELVVQITGELMNIRNALSLVFWKLRNHI 444
Query: 354 FSGTLNTARTRSTSSVLTETSPYSR 378
FS + + +SS + E++ S+
Sbjct: 445 FSNETDYNNSHISSSEIAESNATSQ 469
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 113/192 (58%), Gaps = 27/192 (14%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------ 238
+V +RILC K+G+VIGKGG+II++L++E GA I V +P DER+I ++AS
Sbjct: 45 DVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERRE 104
Query: 239 ----------------EGPESRYSPA-QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR 281
G ES PA Q+A+ VF+R++EG + SS V AR
Sbjct: 105 GKPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRN---VTAR 161
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKD 340
L+V SNQ+GCLLGK G II +MR +G IR++ +QL KC D +VQ++GE + VK
Sbjct: 162 LLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVKK 221
Query: 341 AVYNVTGRLRDN 352
A+ ++ RL DN
Sbjct: 222 ALTTISTRLYDN 233
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 130/248 (52%), Gaps = 38/248 (15%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+ E + R+LC N+K+G+VIGKGG IIR+++ E A I + + +ER+I +T++E
Sbjct: 276 EGEFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLH 335
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+ SPA +AV+ + SR+ + ++EK ++ R +V S +GCLLGK G+II++
Sbjct: 336 EQVSPALEAVLQLQSRISDPSAEKDGAMTT--------RFLVPSANIGCLLGKKGSIIAD 387
Query: 303 MRKVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
MR+ T +IR++S + L KC E+D +VQ+ G+ + +DAV + RLR N FS +
Sbjct: 388 MRRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIFSEHMKNV 447
Query: 362 RTRSTSSVLTETSPYSRLKDPASFGVHSSVAVS------HD-----FSQPPLTQDGNWSS 410
+ GV SV VS H+ FS P L G SS
Sbjct: 448 SSNP------------------GLGVQGSVPVSSTYEPRHEPSPGMFSLPGLGSQGLRSS 489
Query: 411 SEGQLRCW 418
R W
Sbjct: 490 IPATPRNW 497
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 25/225 (11%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--TASEGPESR 244
S+RILC + K G VIGK G+II++++ GA+I+V +P +ER+I + T PE R
Sbjct: 61 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 120
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGL-----------DFSSNKGLLVNARLVVASNQVG 290
+SPAQ+A+ L+ R++E + G+ ++ G V RLVV+ VG
Sbjct: 121 MPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVG 180
Query: 291 CLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
CLLGKGG II +MR T T IRI+ L +C+S ++ +VQ+ G+ S VK+AV ++ R
Sbjct: 181 CLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSR 240
Query: 349 LRD------NHFSGTLNTA-RTRSTSSVLTETSPYSRLKDPASFG 386
LR+ +HF G +++ R + S + P SFG
Sbjct: 241 LRESQHRDRSHFHGRVHSPERLFDDDYAPHMNTRRSSMDGPPSFG 285
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 99/168 (58%), Gaps = 10/168 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+++ FRILC DK+ V+G+ I+ LQ+E G + V + DE++IT+ + EGP+
Sbjct: 324 EDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSEEGPDD 383
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
PAQ+A++ + +R++ D + + RL+V S+++GCL G+ + +SE+
Sbjct: 384 ELFPAQEALLHIQTRIV--------DLVPDNDHITTTRLLVRSSEIGCLEGRDAS-LSEI 434
Query: 304 RKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++TG +I I+ ++L +S D +VQI GE +DA+ VT RLR
Sbjct: 435 ERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALVEVTSRLR 482
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 127/220 (57%), Gaps = 3/220 (1%)
Query: 139 HVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVG 198
H D+ NS L + SI+ S + ++ ++LD++ V FR+LCSN+ G
Sbjct: 231 HEDLFPHLNSWLPSMEGLSINDASK---QTTNANGNSSLDSKGSGHAVVFRLLCSNNVAG 287
Query: 199 AVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSR 258
+VIGK G+I+R + GA I + + +ER++T++A E ES SPAQ AV+LVF+R
Sbjct: 288 SVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTR 347
Query: 259 LIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQL 318
+ E G ++ V ARL++ ++ + L G G +ISE+R+V+G I+++ +
Sbjct: 348 IAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGEP 407
Query: 319 LKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
+ S+ND VVQI+G + V++A+ +T +RDN + L
Sbjct: 408 IPNASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNEL 447
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGP--- 241
+++FR++C + VG +IG G+I+ L+ E G I + D+R+I V S
Sbjct: 38 QIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKG 97
Query: 242 ------ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
E S AQ+ VV VF R+ SEKG + V +L+ S+QVG ++GK
Sbjct: 98 IVLGDREMEVSNAQEGVVRVFDRVWGLESEKGGNGE------VYGKLLAHSSQVGAIVGK 151
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS 355
GG IS +R +G++IR+ C ++++ ++ I+GE VK A+ V+ L+D
Sbjct: 152 GGKNISNIRNNSGSNIRVCPAP--HCAAKDEELILITGESLAVKKALIYVSYCLQDCPPM 209
Query: 356 G--TLNTART-----RSTSSVLTETSPY 376
G +LNT T RSTS + P+
Sbjct: 210 GKVSLNTPPTINSSDRSTSYTHEDLFPH 237
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 111/183 (60%), Gaps = 18/183 (9%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--TASEGPESR 244
S+RILC + K G VIGK GTII++++ GA+I+V +P +ER+I + T PE R
Sbjct: 76 SYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 135
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGLDFS-----------SNKGLLVNARLVVASNQVG 290
+SPAQ+A+ L+ R++E + G+ ++ +N V RLVV+ VG
Sbjct: 136 MPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSRMHVG 195
Query: 291 CLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
CLLGKGG II +MR T T IRI+ L +C+S ++ +VQ+ G+ + VK+A+ ++ R
Sbjct: 196 CLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAIISSR 255
Query: 349 LRD 351
LR+
Sbjct: 256 LRE 258
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 101/167 (60%), Gaps = 10/167 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
++ FR+LC DKV V+G+ I+ LQ++ G + V + DE++I +++ EGP+
Sbjct: 343 DLVFRMLCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDE 402
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PAQ+A++ + + +I D + ++ +L+V+S ++GCL G+ G+ +SEM
Sbjct: 403 LFPAQEALLHIQTHII--------DLVPDSDNIIKTKLIVSSGEIGCLEGRDGS-LSEME 453
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++TG I+I+ ++L C+SE D +VQI GE +DA+ VT RLR
Sbjct: 454 RLTGAKIQILPREKLPACVSEADELVQIEGEIKAARDALVEVTSRLR 500
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 25/225 (11%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--TASEGPESR 244
S+RILC + K G VIGK G+II++++ GA+I+V +P +ER+I + T PE R
Sbjct: 87 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 146
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGL-----------DFSSNKGLLVNARLVVASNQVG 290
+SPAQ+A+ L+ R++E + G+ ++ G V RLVV+ VG
Sbjct: 147 MPSFSPAQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVVSRMHVG 206
Query: 291 CLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
CLLGKGG II +MR T T IRI+ L +C+S ++ +VQ+ G+ + VK+AV ++ R
Sbjct: 207 CLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVAIISSR 266
Query: 349 LRD------NHFSGTLNTA-RTRSTSSVLTETSPYSRLKDPASFG 386
LR+ +HF G + + R V + S + P SFG
Sbjct: 267 LRESQHRDRSHFHGRVQSPERFLDDDYVPHMNTRRSSMDGPPSFG 311
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 133/249 (53%), Gaps = 28/249 (11%)
Query: 121 ETQHR----LFGAVS--QEILPDLHVDILSQRNSVLTTAPS-----SSISYVS---AVRP 166
E+QHR G V + L D +V ++ R S + PS S +Y + + R
Sbjct: 269 ESQHRDRSHFHGRVQSPERFLDDDYVPHMNTRRSSMDGPPSFGSRLSGPNYRNNNYSSRA 328
Query: 167 LSLESDRVATLDARTQQ----QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG 222
D A +A + Q +++ FRILC DKV V+G+ ++ LQ+E G + V
Sbjct: 329 PGFPVDAGADPNADSAQPFYVEDLVFRILCPIDKVNRVVGESDGLVDLLQNEIGVDVKVA 388
Query: 223 ATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARL 282
+ DE++IT+ + EGP+ PAQ+A++ + +R++ D ++K ++ RL
Sbjct: 389 DPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTRIV--------DLVADKDNIITTRL 440
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKC-ISENDRVVQISGEFSKVKDA 341
+V S+++GCL G+ G+ +SEM +TG +I I+ ++L +S D +VQI GE +DA
Sbjct: 441 LVPSSEIGCLEGRDGS-LSEMESLTGATIEILPKEMLPTYLSGTDELVQIQGEVKAARDA 499
Query: 342 VYNVTGRLR 350
+ VT RLR
Sbjct: 500 LVEVTSRLR 508
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 143/261 (54%), Gaps = 32/261 (12%)
Query: 175 ATLDARTQQQE-----VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD 229
A A+TQQ S+RILC + K G VIGK G+II++++ GA+I+V MP +
Sbjct: 45 AARHAKTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDE 104
Query: 230 ERLITV--TASEGPESR---YSPAQKAVVLVFSRLIE-----GTSEKGLDFSSNKGLL-- 277
ER+I + T PE R +SPAQ+A++L+ R++E G +E ++ + +G
Sbjct: 105 ERIIEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAG 164
Query: 278 ---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQIS 332
V RLVV+ VGCLLGKGG II +MR T T IRI+ L +C+S ++ +VQ+
Sbjct: 165 RDRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVV 224
Query: 333 GEFSKVKDAVYNVTGRLRD------NHFSGTLNTAR---TRSTSSVLTETSPYSRLK-DP 382
G+ + VK+A+ ++ RLR+ +HF G +++ + V TS R D
Sbjct: 225 GDVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDG 284
Query: 383 ASFGVHSSVAVSHDFSQPPLT 403
ASFG S S + + P L+
Sbjct: 285 ASFGSRGSNTNSRNNNHPSLS 305
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 10/168 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ FRILC +KV +IG+ I+ LQSE G + V + DE++I +T+ EGP+
Sbjct: 325 EELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEEGPDD 384
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
PAQ+A++ + +R++ D +K + RLVV S+++ CL GK + +SE+
Sbjct: 385 ELFPAQEALLHIQTRIV--------DLVLDKDNTITTRLVVPSSEIECLDGKDVS-LSEI 435
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
R++TG +I+I+ D L C+++ D +VQI GE +DAV VT RLR
Sbjct: 436 RRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAVVEVTSRLR 483
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 119/192 (61%), Gaps = 6/192 (3%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++FR+LC ++KVG VIGKGG II+ LQ E G I V + + ++R+I ++ P+ R
Sbjct: 321 LTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILISGPAHPDDRI 380
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S AQ AV+ V +R+ + L K V RL+V+SNQ+GCLLGKGG I++EMRK
Sbjct: 381 SAAQDAVLRVQTRIA-----RALPLPEGKEKAVIGRLLVSSNQIGCLLGKGGAIMAEMRK 435
Query: 306 VTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
TG IRI+ DQ+ KC SEN+ VVQI+GE V++A+ +T RLR++ F +
Sbjct: 436 STGAYIRILGKDQIPKCASENEEVVQINGEHEVVQEALLQITTRLRNHFFRDVFPSIDHP 495
Query: 365 STSSVLTETSPY 376
S + L + P+
Sbjct: 496 SNPAFLDQAPPF 507
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 104/221 (47%), Gaps = 56/221 (25%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V FRILC K G +IGKGG II ++ E GA + V T+P DER++ + A E
Sbjct: 36 VVFRILCPASKTGGIIGKGGAIISQIRQETGAKVRVEETVPGSDERVVIIAAGSDKEMEV 95
Query: 246 SPA--------------------------------------------------QKAVVLV 255
+ A QKA+VLV
Sbjct: 96 NNAEQNRGDSDDKEPNVGEESNGKQAGSDEDDENKETVSVEHSTKSVRETSSLQKALVLV 155
Query: 256 FSRLIEGTSEKGLDFSS---NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIR 312
F R++E E +D + K + RL+V S+QVGCLLGKGG++I +M +G IR
Sbjct: 156 FERMLEAEPE--MDEGNEEKKKPSMSTLRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIR 213
Query: 313 IIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I+ D+L C S D +VQI+GE ++ A+ +V +L +N
Sbjct: 214 ILPRDKLPICASPTDELVQIAGEVDAIRKALQSVAQQLLEN 254
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 20/122 (16%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLDART------QQQEVSFRILCSNDKVGAVIG 202
+L + P+ +SA + L RV T AR +++ V R+L S++++G ++G
Sbjct: 368 ILISGPAHPDDRISAAQDAVL---RVQTRIARALPLPEGKEKAVIGRLLVSSNQIGCLLG 424
Query: 203 KGGTIIRALQSEAGAFISVGAT--MPEC---DERLITVTASEGPESRYSPAQKAVVLVFS 257
KGG I+ ++ GA+I + +P+C +E ++ + + Q+A++ + +
Sbjct: 425 KGGAIMAEMRKSTGAYIRILGKDQIPKCASENEEVVQING------EHEVVQEALLQITT 478
Query: 258 RL 259
RL
Sbjct: 479 RL 480
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 109/172 (63%), Gaps = 7/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG++I+ ++ E+GAFI V ++ E D+ +I++++ E E
Sbjct: 94 KEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISSKEFFED 153
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A V RL SEK S + RL+V ++++GCL+GKGG+IISEM
Sbjct: 154 PISPTIDAAV----RLQPKCSEKSDRESGDSTF--TTRLLVPTSRIGCLIGKGGSIISEM 207
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
RKVT +IRI+S + L K SE+D +VQI+G+ ++A+ VT RL+ N F
Sbjct: 208 RKVTKANIRILSKENLPKVASEDDEMVQITGDLDVARNALIQVTTRLKTNFF 259
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 13/183 (7%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q + +R LC K+G++IG+GG I++ L+ + A I +G T+P CDER++TV +
Sbjct: 46 QDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDES 105
Query: 243 SRY-------SPAQKAVVLVFSRLI----EGTSEKGLDFSS-NKGLLVNARLVVASNQVG 290
+ + PA A+V + ++I G ++ +D + G LV A+L+VAS+Q+G
Sbjct: 106 NDFEDSGEFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIG 165
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRL 349
C++GKGG I+ +R TG IRI+ D L C +D +VQISGE + VK A+ V RL
Sbjct: 166 CVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARL 225
Query: 350 RDN 352
DN
Sbjct: 226 HDN 228
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 117/195 (60%), Gaps = 15/195 (7%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R +C +G VIGKGG II ++ ++GA I V ++ E D+ LI ++A E E
Sbjct: 294 KEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFED 353
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+S +A VL+ R SEK + G+L +RL+V+S+++GCL+GKGG+II+E
Sbjct: 354 PFSATIEAAVLLQPR----CSEK---VERDSGILSFTSRLLVSSSRIGCLIGKGGSIITE 406
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
MR++T +IRI+S + L K +E+D +VQISGE KDA+ V RLR N F
Sbjct: 407 MRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRANLFD------ 460
Query: 362 RTRSTSSVLTETSPY 376
+ RS SS+L Y
Sbjct: 461 KERSVSSLLPPVLAY 475
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 138/273 (50%), Gaps = 43/273 (15%)
Query: 175 ATLDARTQQQE-----VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD 229
A A+TQQ S+RILC + K G VIGK G+II++++ GA+I+V MP +
Sbjct: 45 AARHAKTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDE 104
Query: 230 ERLITV--TASEGPESR---YSPAQKAVVLVFSRLIEGTSEKGL-------DFSSNKGLL 277
ER+I + T PE R +SPAQ+A++L+ R++E + G+
Sbjct: 105 ERIIEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDR 164
Query: 278 VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEF 335
+ RLVV+ VGCLLGKGG II +MR T T IRI+ L +C+S ++ +VQ+ G
Sbjct: 165 IATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNV 224
Query: 336 SKVKDAVYNVTGRLRD------NHFSGTLNTARTRSTSSVLTETSPY-------SRLK-- 380
+ VK+A+ ++ RLR+ +HF G R S + Y SR
Sbjct: 225 NAVKNALVIISSRLRESQHRDRSHFHG-----RVHSPERFFSPDDDYVPHVTSGSRRSSV 279
Query: 381 DPASFGVHSSVAVSHDFSQPPLTQDGNWSSSEG 413
D ASFG S S + + P L N++ G
Sbjct: 280 DGASFGSRGSNTNSRNNNHPSL----NYAMEPG 308
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 10/168 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ FRILC +KV +IG+ I+ LQ+E G + V + DE++I +T+ EGP+
Sbjct: 322 EELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDD 381
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
PAQ+A++ V +R++ D +K + RLVV S+++ CL GK + +SE+
Sbjct: 382 ELFPAQEALLHVQTRIV--------DLVLDKDNTITTRLVVPSSEIECLDGKDVS-LSEI 432
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
R++TG +I+I+ D+L C+++ D +VQI GE +DAV VT RLR
Sbjct: 433 RRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARDAVVEVTSRLR 480
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 53/323 (16%)
Query: 68 EAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLF 127
EAVP D + RP+E Q+ +R ++ P L R +E+ ++ R F
Sbjct: 223 EAVP-DALRRPMEYRSQQ--YREVD--PHGSLHRHVEISQEDALVRP-----------FF 266
Query: 128 GAVSQ---EILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQ 184
++Q + LP D + ++T+A S V+ +PL D + +
Sbjct: 267 RTITQPRIDYLPHPSYD-----HRLITSA--SKNPPVTIKQPLQASKDDI---------R 310
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
+V +ILCSN+ VI +S A ISVG P+CDERL+T+TA E +
Sbjct: 311 QVDLKILCSNESASVVI--------KTRSVTDASISVGDRHPDCDERLVTITAFEKTKDI 362
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL--VNARLVVASNQVGCLLGKGGTIISE 302
S +Q+A+VLVFS + E + K LD GL + ARLVV SNQ+ CLLG+ G I +
Sbjct: 363 TSESQRALVLVFSNMYENATAKVLD----SGLTSSITARLVVRSNQINCLLGEEGRIKTT 418
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
+++ TG I +++ +Q KC+SEN++VVQISGEF V++A+ VT LR++ + +
Sbjct: 419 IQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRG 478
Query: 362 RTRSTSSVLTETSPYSRLKDPAS 384
S +V P+ L P +
Sbjct: 479 ---SQYAVNYSEDPFPELFSPTA 498
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 34/192 (17%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-MPECDERLITVTASEGPE 242
+ V+FRILC+ + G VIGK G +++ L + I V T + + R+I + G
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 243 SRY-----------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
SR S AQ A++ VF + L+F V+
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVF---------EALNFGDCTSSTVS 138
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE-FSKV 338
L++ + V ++GK G ++ + + TG ++++ S L C + D V++I G S V
Sbjct: 139 CNLLMEGSHVVTVIGKNGELMQRILEETGCNVQLRSHDLSICTNPGDVVLKIEGNRLSAV 198
Query: 339 KDAVYNVTGRLR 350
A+ +++ RL+
Sbjct: 199 MKALVSISSRLQ 210
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +GAVIGKGGTII ++ E+GA I V ++ E D+ LIT++A E +
Sbjct: 29 KEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISAKEICDD 88
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+YSP +A + RL SEK + GL RL+V S+ +GCLLGKGG II E
Sbjct: 89 QYSPTIEAAL----RLQPRCSEK---MERDSGLFSFTTRLLVPSSHIGCLLGKGGLIIDE 141
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MRK+T IRI D+L K ++D +VQISG+ KDA+ ++ RLR N F
Sbjct: 142 MRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRANAF 194
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 154/291 (52%), Gaps = 50/291 (17%)
Query: 68 EAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLF 127
EAVP D + RP+E Q+ +R E P L R +E+ ++ R F
Sbjct: 227 EAVP-DALRRPMEYRSQQ--YR--EVDPHGSLHRHVEISQEDALVRP-----------FF 270
Query: 128 GAVSQ---EILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQ 184
++Q + LP D + ++T+A S V+ +PL D + +
Sbjct: 271 RTITQPRIDYLPHPSYD-----HRLITSA--SKNPPVTIKQPLQASKDDI---------R 314
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
+V +ILCSN+ VI +S A ISVG P+CDERL+T+TA E +
Sbjct: 315 QVDLKILCSNESASVVIKT--------RSVTDASISVGDRHPDCDERLVTITAFEKTKDI 366
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL--VNARLVVASNQVGCLLGKGGTIISE 302
S +Q+A+VLVFS + E + K LD GL + ARLVV SNQ+ CLLG+ G I +
Sbjct: 367 TSESQRALVLVFSNMYENATAKVLD----SGLTSSITARLVVRSNQINCLLGEEGRIKTT 422
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+++ TG I +++ +Q KC+SEN++VVQISGEF V++A+ VT LR++
Sbjct: 423 IQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLRED 473
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 33/151 (21%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-MPECDERLITVTASEGPE 242
+ V+FRILC+ + G VIGK G +++ L + I V T + + R+I + G
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 243 SRY-----------------------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
SR S AQ A++ VF + L+F V+
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVF---------EALNFGDCTSSTVS 138
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
L++ + V ++GK G ++ + + TG +
Sbjct: 139 CNLLMEGSHVVTVIGKNGELMQRILEETGCN 169
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 130/248 (52%), Gaps = 38/248 (15%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+ E + R+LC N+K+G+VIGKGG IIR+++ E A I + + +ER+I +T++E
Sbjct: 272 EGEFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNEVLH 331
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+ SPA +AV+ + SR+ + ++EK ++ R +V S +GCLLGK G+II++
Sbjct: 332 EQVSPALEAVLQLQSRISDPSAEKDGAMTT--------RFLVPSANIGCLLGKKGSIIAD 383
Query: 303 MRKVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
MR+ T +IR++S + L KC E+D +VQ+ G+ + +DAV + RLR N FS +
Sbjct: 384 MRRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIFSEHMKNV 443
Query: 362 RTRSTSSVLTETSPYSRLKDPASFGVHSSVAVS------HD-----FSQPPLTQDGNWSS 410
+ GV SV VS H+ FS P L G SS
Sbjct: 444 SSNP------------------GLGVQGSVPVSSTYEPRHEPSPGMFSLPGLGSQGLRSS 485
Query: 411 SEGQLRCW 418
R W
Sbjct: 486 IPATPRNW 493
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 27/190 (14%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE----- 239
+V +RILC K+G+VIGKGG+II++L++E GA I V +P DER+I ++ E
Sbjct: 45 DVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERREGK 104
Query: 240 ---------------GPESRYSPA-QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV 283
G ES PA Q+A+ VF+R++EG + SS V ARL+
Sbjct: 105 PRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRN---VTARLL 161
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAV 342
V SNQ+GCLLGK G II +MR +G IR++ +QL KC D + ++GE + VK A+
Sbjct: 162 VPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDEL--LTGELALVKKAL 219
Query: 343 YNVTGRLRDN 352
++ RL DN
Sbjct: 220 TTISTRLYDN 229
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
+ +++V F+I+ ++ G +IGK GTIIRALQ+E GA ISVGA + ER++TV+A
Sbjct: 270 GNSTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSAR 329
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E ESRYS AQ A+ LVF+R +E EKGL + G +V +L+V S+ G G
Sbjct: 330 ENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGN- 388
Query: 299 IISEMRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
E TG + I + +Q+L+ ISEN+ V++I GE+S V+ A+ +V+ +LR+N
Sbjct: 389 --REAIIATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLREN 441
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------ 238
E + R++C +G +IG G ++ L+ E G I + + D ++ + S
Sbjct: 24 ETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQS 83
Query: 239 ----------EGPE------SRYSPAQKAVVLVFSRLI-------EGTSEKGLDFSSNKG 275
G E S AQ A++ V R G G D + G
Sbjct: 84 ILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCG 143
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
+L + NQ+G +LG GG + MR+ +G IR++ + C ++ND ++QI+G+
Sbjct: 144 ILAD------RNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPI--CGTKNDELIQITGDV 195
Query: 336 SKVKDAVYNVTGRLRDN 352
VK A+ V+ +++N
Sbjct: 196 LAVKKALVMVSSYIQNN 212
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 111/175 (63%), Gaps = 4/175 (2%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
+ +++V F+I+ ++ G +IGK GTIIRALQ+E GA ISVGA + ER++TV+A
Sbjct: 270 GNSTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSAR 329
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E ESRYS AQ A+ LVF+R +E EKGL + G +V +L+V S+ G G
Sbjct: 330 ENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGN- 388
Query: 299 IISEMRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
E TG + I + +Q+L+ ISEN+ V++I GE+S V+ A+ +V+ +LR+N
Sbjct: 389 --REAIIATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLREN 441
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------ 238
E + R++C +G +IG G ++ L+ E G I + + D ++ + S
Sbjct: 24 ETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQS 83
Query: 239 ----------EGPE------SRYSPAQKAVVLVFSRLI-------EGTSEKGLDFSSNKG 275
G E S AQ A++ V R G G D + G
Sbjct: 84 ILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCG 143
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
+L + NQ+G +LG GG + MR+ +G IR++ + C ++ND ++QI+G+
Sbjct: 144 ILAD------RNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPI--CGTKNDELIQITGDV 195
Query: 336 SKVKDAVYNVTGRLRDN 352
VK A+ V+ +++N
Sbjct: 196 LAVKKALVMVSSYIQNN 212
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 105/173 (60%), Gaps = 11/173 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY-- 245
FR LC K+G+VIG+GG I++ L+++ A I +G +P CDER++T+ +S + +
Sbjct: 46 FRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDE 105
Query: 246 -----SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
SPAQ A+ V R+I + + D N V A+L+V S+Q+GC++GKGG I+
Sbjct: 106 TGDLVSPAQDALFRVHQRVIAEDAREDEDDERNH---VTAKLLVPSDQIGCVIGKGGQIV 162
Query: 301 SEMRKVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+R TG IRI+ D L C ND +VQISGE + VK A++ + ++RDN
Sbjct: 163 QNIRSETGAQIRILKDDRLPPCALSNDELVQISGEAAVVKKALFQIAAQIRDN 215
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R +C +G VIGKGG II ++ ++GA I V ++ E D+ LI ++ E E
Sbjct: 277 REFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+SP +A V RL SEK + G++ RL+V ++++GCL+GKGGTI++E
Sbjct: 337 SFSPTIEAAV----RLQPRCSEK---VERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTE 389
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR++T +IRI+S + L K SE+D +VQISG+ KDA+ RLR N F
Sbjct: 390 MRRLTKANIRILSKENLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLF 442
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 110/171 (64%), Gaps = 4/171 (2%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+++V F+I+ ++ G +IGK GTIIRALQ+E GA IS+GA + ER++T++A E E
Sbjct: 274 ERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTISARENLE 333
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SRYS AQ A+ LVF+R +E EKGL + G +V +L+V S L+G G E
Sbjct: 334 SRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGNGN---RE 390
Query: 303 MRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
TG + I + +Q+L+ ISEN+ V++I GE+ V+ A+ +V+ +LR+N
Sbjct: 391 AIIATGADVHIPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSSKLREN 441
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------ 238
E + R++C +G +IG G ++ L+ E G I + + D ++ + S
Sbjct: 24 ETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNKS 83
Query: 239 ----------EGPESR------YSPAQKAVVLVFSRLI-------EGTSEKGLDFSSNKG 275
G E S AQ A++ V R G G D + G
Sbjct: 84 VLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCG 143
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
+L + NQ+G +LG GG + MR+ +G IR++ + C + D ++QI+G+
Sbjct: 144 ILAD------RNQIGAVLGLGGKNVEWMRRSSGAMIRVLPPPI--CGTNTDELIQITGDV 195
Query: 336 SKVKDAVYNVTGRLRDN 352
VK A+ V+ ++DN
Sbjct: 196 LAVKKALVMVSTCIQDN 212
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 106/179 (59%), Gaps = 10/179 (5%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS--- 238
+++ FR LC K+G++IG+GG I++ L+ E A I +G T+P CDER++TV +S
Sbjct: 43 NKEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDE 102
Query: 239 ----EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
+ + SPA+ A+ + R++ + D G VNA+L+V S+Q+GC+LG
Sbjct: 103 TNTVDDGDKLVSPAEDALFKIHDRVV--AEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLG 160
Query: 295 KGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
KGG I+ +R TG IRI+ D + C +D +VQISG+ + VK A++ + RL N
Sbjct: 161 KGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHN 219
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 10/182 (5%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A D + +E S R++C +G VIGKGG II ++ ++GA I V ++ + D+ LIT
Sbjct: 278 APRDEISSSKEFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSA-KGDDCLIT 336
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLL 293
++ E E +SP +A VL+ R E SE+ + G++ RL+V+S+++GCL+
Sbjct: 337 ISTKEFFEETFSPTVEAAVLLQPRCSE-KSER------DSGIISFTTRLLVSSSRIGCLI 389
Query: 294 GKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
GKGG+II+EMR++T ++IRI+S + L K S++D +VQISG+ KDA+ V RLR N
Sbjct: 390 GKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRAN 449
Query: 353 HF 354
F
Sbjct: 450 LF 451
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 135/218 (61%), Gaps = 21/218 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+ ++FR+LCS+DKVG +IGKGG I+++Q++ G I V T+P+ ++R++ ++ P
Sbjct: 113 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 172
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ A++ V +++ ++ K +G + RL+V+ NQVGCLLGKGG+II+EM
Sbjct: 173 GISPAQNAILHVQRKIVPTSNTK-------EGPAI-CRLIVSPNQVGCLLGKGGSIIAEM 224
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
RK++G I ++S D++ K + END VVQISG +++A+ +T RLR++ F R
Sbjct: 225 RKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF-------R 277
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQP 400
R S+V P+ L DP FG S A +HD P
Sbjct: 278 DRMASTVPNVQPPFG-LVDP-QFG---SYAGNHDSISP 310
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 106/179 (59%), Gaps = 10/179 (5%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS--- 238
+++ FR LC K+G++IG+GG I++ L+ E A I +G T+P CDER++TV +S
Sbjct: 43 NKEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDE 102
Query: 239 ----EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
+ + SPA+ A+ + R++ + D G VNA+L+V S+Q+GC+LG
Sbjct: 103 TNTVDDGDKLVSPAEDALFKIHDRVV--AEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLG 160
Query: 295 KGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
KGG I+ +R TG IRI+ D + C +D +VQISG+ + VK A++ + RL N
Sbjct: 161 KGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHN 219
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 10/182 (5%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A D + +E S R++C +G VIGKGG II ++ ++GA I V ++ + D+ LIT
Sbjct: 278 APRDEISSSKEFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSSA-KGDDCLIT 336
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLL 293
++ E E +SP +A VL+ R E SE+ + G++ RL+V+S+++GCL+
Sbjct: 337 ISTKEFFEETFSPTVEAAVLLQPRCSE-KSER------DSGIISFTTRLLVSSSRIGCLI 389
Query: 294 GKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
GKGG+II+EMR++T ++IRI+S + L K S++D +VQISG+ KDA+ V RLR N
Sbjct: 390 GKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTRLRAN 449
Query: 353 HF 354
F
Sbjct: 450 LF 451
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 135/218 (61%), Gaps = 21/218 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+ ++FR+LCS+DKVG +IGKGG I+++Q++ G I V T+P+ ++R++ ++ P
Sbjct: 412 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 471
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ A++ V +++ ++ K +G + RL+V+ NQVGCLLGKGG+II+EM
Sbjct: 472 GISPAQNAILHVQRKIVPTSNTK-------EGPAI-CRLIVSPNQVGCLLGKGGSIIAEM 523
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
RK++G I ++S D++ K + END VVQISG +++A+ +T RLR++ F R
Sbjct: 524 RKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF-------R 576
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQP 400
R S+V P+ L DP FG S A +HD P
Sbjct: 577 DRMASTVPNVQPPFG-LVDP-QFG---SYAGNHDSISP 609
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A KA++LVF R+ E G +S + V+ RL+V +QVG LLGK G++I +M +
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDS 304
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-----RDNHFSGTLNTAR 362
IR+ D+L C D + QI+GE V+ + V L +++ G N+
Sbjct: 305 CCEIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGAHNSGS 364
Query: 363 TRS 365
+RS
Sbjct: 365 SRS 367
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
FRILC K G VIGKGG II ++ E G I V +P CDER+I +TA
Sbjct: 90 FRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 135/218 (61%), Gaps = 21/218 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+ ++FR+LCS+DKVG +IGKGG I+++Q++ G I V T+P+ ++R++ ++ P
Sbjct: 386 EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGD 445
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SPAQ A++ V +++ ++ K +G + RL+V+ NQVGCLLGKGG+II+EM
Sbjct: 446 GISPAQNAILHVQRKIVPTSNTK-------EGPAI-CRLIVSPNQVGCLLGKGGSIIAEM 497
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
RK++G I ++S D++ K + END VVQISG +++A+ +T RLR++ F R
Sbjct: 498 RKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF-------R 550
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQP 400
R S+V P+ L DP FG S A +HD P
Sbjct: 551 DRMASTVPNVQPPFG-LVDP-QFG---SYAGNHDSISP 583
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A KA++LVF R+ E G +S + V+ RL+V +QVG LLGK G++I +M +
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDS 304
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
IR+ D+L C D + QI+GE V+ + V
Sbjct: 305 CCEIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVA 343
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
FRILC K G VIGKGG II ++ E G I V +P CDER+I +TA
Sbjct: 90 FRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
+Q +V FR++CS+ G +IG GG+++RALQ++ GA I + D+RL+TV+A E
Sbjct: 77 NEQSQVQFRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTVSALEN 136
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
ES +SPAQ A++LVF+R IE E+ + + V A L++ SN+V CL+G+GG +
Sbjct: 137 LESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNKVYCLIGRGGRVD 196
Query: 301 SEMRKVTGTSIRII-SDQLLKCISENDRVVQI 331
SEM + TG I+I+ DQ S+ND VVQ+
Sbjct: 197 SEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +GAVIGKGGTII ++ E+GA I V +++ E D+ LIT++A E
Sbjct: 280 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKE-IYD 338
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
YSP +A V RL SEK + GL+ RL+V S+++GCLLGKGG II E
Sbjct: 339 HYSPTIEAAV----RLQPRCSEK---MERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDE 391
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MRK+T IRI + L K S++D +VQI+G+ KDA+ ++ RLR N F
Sbjct: 392 MRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF 444
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 120/219 (54%), Gaps = 13/219 (5%)
Query: 142 ILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVI 201
+ QRNS A S S + + + DR + Q+ +R LC K+G++I
Sbjct: 1 MAGQRNSYGKRAHSQSDYDIGGNKRRNSGDDRERFV---IDSQDTVYRYLCPARKIGSII 57
Query: 202 GKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY-------SPAQKAVVL 254
G+GG II+ L+ + + I VG T+P C+ER++T+ + + Y SPAQ A+
Sbjct: 58 GRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDSGNYISPAQDALFR 117
Query: 255 VFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
V ++I + ++ S V A+L+V S+Q+GC++GKGG I+ +R TG IRI+
Sbjct: 118 VHDKVI--AEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRIL 175
Query: 315 SDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
D+ L C +D +VQISGE + +K A+Y + RL DN
Sbjct: 176 KDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDN 214
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
+Q +V FR++C + G++IGKGG+++RALQ++ GA I + + D RL+TV+A E
Sbjct: 251 NEQLQVQFRMICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPITNSDGRLVTVSALEN 310
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
ES +SPAQ A++LVF+R IE E+ + + V A L++ SN+V CL+ +GG I
Sbjct: 311 LESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNRVSCLIERGGRID 370
Query: 301 SEMRKVTGTSIRII-SDQLLKCISENDRVVQI 331
SEM + TG I+I+ DQ C S ND V+Q+
Sbjct: 371 SEMIETTGADIQILQGDQFFYCASNNDVVLQV 402
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 20/182 (10%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGP 241
Q +V+FR++C K+GA+IG G++I ++ E G + + + R I V S P
Sbjct: 22 QPGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASP 81
Query: 242 ESR----------YSPAQKAVVLVFSRLIEGTSEK-GLDFSSNKGLLVNARLVVASNQVG 290
E + S AQ+AVV V R+ E + K G D GLL N ++Q+G
Sbjct: 82 ERKIAVGEDETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGYCGLLAN------TSQIG 135
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFS-KVKDAVYNVTGRL 349
++G+ G I M++ +G I I+ L C + D+++QI+G + VK AV +T L
Sbjct: 136 AVVGREGRNIKRMKRASGAHIWILPAPL--CALKEDQLIQITGSSTVAVKKAVIAITSCL 193
Query: 350 RD 351
+D
Sbjct: 194 QD 195
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +GAVIGKGGTII ++ E+GA I V +++ E D+ LIT++A E
Sbjct: 29 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKE-IYD 87
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
YSP +A V RL SEK + GL+ RL+V S+++GCLLGKGG II E
Sbjct: 88 HYSPTIEAAV----RLQPRCSEK---MERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDE 140
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MRK+T IRI + L K S++D +VQI+G+ KDA+ ++ RLR N F
Sbjct: 141 MRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVF 193
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 11/173 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY-- 245
FR LC K+G+VIG+GG I++ L+++ A I +G +P CDER++T+ +S + +
Sbjct: 46 FRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDE 105
Query: 246 -----SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
SPAQ A+ V R+I + + D N V A+L+V S+Q+GC++GKGG I+
Sbjct: 106 TDDLVSPAQDALFRVHQRVIAEDAREDEDEERNH---VTAKLLVPSDQIGCVIGKGGQIV 162
Query: 301 SEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+R TG IRI+ D+L C D +VQISGE + VK A++ + ++RDN
Sbjct: 163 QNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDN 215
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R +C +G VIGKGG II ++ ++GA I V ++ E D+ LI ++ E E
Sbjct: 277 REFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+SP +A V RL SEK + G++ RL+V ++++GCL+GKGGTI++E
Sbjct: 337 SFSPTIEAAV----RLQPRCSEK---VERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTE 389
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR++T +IRI+S D L K SE+D +VQISG+ KDA+ RLR N F
Sbjct: 390 MRRLTKANIRILSKDNLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANLF 442
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 115/191 (60%), Gaps = 25/191 (13%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS-----EGP 241
S+RILC + K G VIGK G+II++++ GA+I+V +P +ER+I ++ + EG
Sbjct: 5 SYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 64
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
++SPAQ+A+ ++ R++E S+ G +VV+ VGCLLGKGG II
Sbjct: 65 MPQFSPAQEALFMIHDRILE--SDAGF----------GNGMVVSRMHVGCLLGKGGKIIE 112
Query: 302 EMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD------NH 353
+MR T T IRI+ L +C+S ++ +VQ+ G+ + VK+A+ N++ RLR+ +H
Sbjct: 113 QMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRDRSH 172
Query: 354 FSGTLNTARTR 364
F G + ++ R
Sbjct: 173 FHGRIQSSPER 183
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 12/197 (6%)
Query: 157 SISYVSAVRPLSLESDRVATLDARTQ--QQEVSFRILCSNDKVGAVIGKGGTIIRALQSE 214
S S+ S +LES D Q +++ FRILC DKV V+G+ II LQ+E
Sbjct: 221 SNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQNE 280
Query: 215 AGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNK 274
G + V + +E++I +T+ EGP+ PAQ+A++ + +R++ + +K
Sbjct: 281 IGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIV--------NLLPDK 332
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISG 333
++ RL+V S+++GC G+ + +SEMR++TG +I+I+ +QL IS D +++I G
Sbjct: 333 ENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVG 391
Query: 334 EFSKVKDAVYNVTGRLR 350
E +DA+ VT RLR
Sbjct: 392 EIKAARDALVEVTSRLR 408
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 108/173 (62%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II ++ E+GA I V ++ E DE LI ++ E E
Sbjct: 281 KEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEE 340
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+SP +A V RL SEK + G++ RL+V ++++GCL+GKGG+II+E
Sbjct: 341 TFSPTIEAAV----RLQPRCSEK---VERDSGIISFTTRLLVPTSRIGCLIGKGGSIITE 393
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR++T +IRIIS + L K SE+D +VQISG+ KDA+ +V RLR N F
Sbjct: 394 MRRLTKANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHVLTRLRANLF 446
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 18/181 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV-------T 236
++ +R +C K+G+VIG+GG I++ L+ E A I +G T+P C+ER++T+
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETN 99
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF----SSNKGLLVNARLVVASNQVGCL 292
A EG + SPAQ A+ V R++ DF + G V A+L+V S+Q+GC+
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVA------EDFHGDQDDDGGQQVTAKLLVPSDQIGCV 153
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+GKGG+I+ +R TG IRI+ D L C +D +VQI+G+ S VK A+ + RL D
Sbjct: 154 IGKGGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHD 213
Query: 352 N 352
N
Sbjct: 214 N 214
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 24/202 (11%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--TASEGPESR 244
S+RILC + K G VIGK G+II++++ GA+I+V +P +ER+I + T PE R
Sbjct: 68 SYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 127
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-----------VNARLVVASNQVG 290
+SPAQ+A+ ++ R++E + G F N V R+VV+ VG
Sbjct: 128 MPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVSRMHVG 187
Query: 291 CLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
CLLGKGG II +MR T T IRI+ L +C+S ++ +VQ+ G+ + VK+A+ N++ R
Sbjct: 188 CLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSR 247
Query: 349 LRD------NHFSGTLNTARTR 364
LR+ +HF G + ++ R
Sbjct: 248 LRESQHRDRSHFHGRIQSSPER 269
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 12/197 (6%)
Query: 157 SISYVSAVRPLSLESDRVATLDARTQ--QQEVSFRILCSNDKVGAVIGKGGTIIRALQSE 214
S S+ S +LES D Q +++ FRILC DKV V+G+ II LQ+E
Sbjct: 307 SNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQNE 366
Query: 215 AGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNK 274
G + V + +E++I +T+ EGP+ PAQ+A++ + +R++ + +K
Sbjct: 367 IGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIV--------NLLPDK 418
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISG 333
++ RL+V S+++GC G+ + +SEMR++TG +I+I+ +QL IS D +++I G
Sbjct: 419 ENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVG 477
Query: 334 EFSKVKDAVYNVTGRLR 350
E +DA+ VT RLR
Sbjct: 478 EIKAARDALVEVTSRLR 494
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS-------EG 240
+R LC++ K+G++IG+GG I + L++E A I +G ++P CDER++T+ ++ +G
Sbjct: 40 YRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNTIDG 99
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL--LVNARLVVASNQVGCLLGKGGT 298
E PAQ A+ V RL S++GL ++ + V RL+V S+Q+GC++GKGG
Sbjct: 100 AEDEVCPAQDALFRVHERL---ASDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQ 156
Query: 299 IISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
II +R TG IR++S D + C D ++QISG+ V+ A++ V+ RL +N
Sbjct: 157 IIQGIRSETGAQIRVLSNDHIPACAISGDELLQISGDTVVVRKALHQVSSRLHNN 211
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 106/173 (61%), Gaps = 8/173 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER-LITVTASEGPE 242
+E S R+LC+ VG VIGKGG II+ ++ E+GA I V ++ + D+ +ITV+A E E
Sbjct: 276 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFE 335
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SP A V + R E + + + S RL+V+++++GCL+GKGG+II+E
Sbjct: 336 DPVSPTIDAAVRLQPRCSEKSDLESAEQS------YTTRLLVSTSRIGCLIGKGGSIITE 389
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+R+ + ++RI+S + + K +E+D +VQI+G ++A+ + RL+ N F
Sbjct: 390 IRRTSRANVRILSKENVPKVAAEDDEMVQITGGLDVARNALVQIATRLKANFF 442
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT--MPEC 228
+V+ R+L +D++G +IGKGG II+ ++SE GA I V + +P C
Sbjct: 135 QVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSNDHIPAC 180
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 107/181 (59%), Gaps = 18/181 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV-------T 236
++ +R +C K+G+VIG+GG I++ L+ E A I +G T+P C+ER++T+
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETN 99
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF----SSNKGLLVNARLVVASNQVGCL 292
A EG + SPAQ A+ V R++ DF + G V A+L+V S+Q+GC+
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVA------EDFHGDQDDDGGQQVTAKLLVPSDQIGCV 153
Query: 293 LGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+GKGG+I+ +R TG IRI+ D L C +D +VQI+G+ + VK A+Y + RL D
Sbjct: 154 IGKGGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHD 213
Query: 352 N 352
N
Sbjct: 214 N 214
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 107/173 (61%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II ++ ++GA I V ++ E DE LI ++ E E
Sbjct: 281 KEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEE 340
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+SP +A V RL SEK + G++ RL+V + ++GCL+GKGG+II++
Sbjct: 341 TFSPTIEAAV----RLQPRCSEK---VERDSGIISFTTRLLVPTTRIGCLIGKGGSIITD 393
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR++T +IRIIS + L K +E+D +VQISG+ KDA+ +V RLR N F
Sbjct: 394 MRRLTKANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTRLRANLF 446
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 107/177 (60%), Gaps = 11/177 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS----- 238
++ +R LC K+G++IG+GG I++ L+ + + I +G T+P C+ER++T+ +S
Sbjct: 41 EDTVYRYLCPGRKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETN 100
Query: 239 --EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ ++ SPAQ A+ V R++ SE+ S + V RL+V S+Q+GC++GKG
Sbjct: 101 AFDDSDTFVSPAQDALFRVHDRVV---SEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKG 157
Query: 297 GTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G II +R +G +RI+ D L C +D +VQISGE S V+ A+Y + RL DN
Sbjct: 158 GQIIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDN 214
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 10/174 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-MPECDERLITVTASEGPE 242
+E S R++C +G VIGKGG II ++ E+GA I V +T E D+ LI ++A E E
Sbjct: 280 KEFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFE 339
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIIS 301
+SP +A V RL SEK + G++ RL+V ++++GCL+GKGG II+
Sbjct: 340 DTFSPTIEAAV----RLQPRCSEK---VERDSGIVSFTTRLLVPTSRIGCLIGKGGAIIT 392
Query: 302 EMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
EMRK+T +IRI+S + L K SE+D +VQI+G+ KDA+ VT RLR N F
Sbjct: 393 EMRKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVAKDALIQVTTRLRANLF 446
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 105/173 (60%), Gaps = 7/173 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q++SFR+LC + G +IGK G II+ ++E GA I VG C ER+IT++A E P
Sbjct: 279 QQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISALESP-G 337
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
++S Q A++ +F R+ E E+ L F + +AR++V +Q L+G GG II EM
Sbjct: 338 KHSKVQSAILCIFDRMEE--VERNLMFGKPE---CSARVLVPKSQFSSLVGLGGAIIKEM 392
Query: 304 RKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS 355
K TG I I+ + + C S +RV+QI+G V+DA++ V+ +LR++ FS
Sbjct: 393 VKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKLRNHAFS 445
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 127/317 (40%), Gaps = 38/317 (11%)
Query: 90 SLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRNSV 149
+LE P++ R V P S R EA S + L + +QE L + VD+ + V
Sbjct: 76 ALEGYPEDAASRVAVVLGPTSPTRPVEASSSSSGEPLQLSPAQEALVSV-VDVGGVLHRV 134
Query: 150 LTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRI----------LCSNDKVGA 199
+ AP +S + V LE+ TL+A + R+ + S +V
Sbjct: 135 VARAP-EFVSCLVLVEAAGLEALGRGTLEAIASETNAELRVTSLAEGATPSVHSPKEVIE 193
Query: 200 VIGKGGTIIRA-------LQSEAGAF-ISVGATMPECDERLITVTASEGPESRYSPAQKA 251
+ G TI +A LQ + A ++ T P + +SE PE Y
Sbjct: 194 ITGDRTTIRKAIVALSSYLQGDLHACSLTTSVTTP---SPMFPWKSSEVPEPNYGDLHSG 250
Query: 252 VVLVFSRL----IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
V + + I+ + + + ++ RL+ N G L+GK G II T
Sbjct: 251 VSTKCANINVPWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETET 310
Query: 308 GTSIRIISDQLLKCISENDRVVQIS-----GEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
G SI + + C+ +RV+ IS G+ SKV+ A+ + R+ + L +
Sbjct: 311 GASID-VGNPFSGCM---ERVITISALESPGKHSKVQSAILCIFDRMEE--VERNLMFGK 364
Query: 363 TRSTSSVLTETSPYSRL 379
++ VL S +S L
Sbjct: 365 PECSARVLVPKSQFSSL 381
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 11/174 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS-------EG 240
+R LC++ K+G++IG+GG I + L+++ A I +G ++P CDER+IT+ +S E
Sbjct: 42 YRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTVED 101
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTI 299
E + PAQ A+ V +LI T + D + +GL V RL+V S+Q+GC++GKGG I
Sbjct: 102 TEDKVCPAQDALFRVHEKLI--TDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHI 159
Query: 300 ISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I +R TG+ IR++S + L C D ++QISG+ V+ A+ V+ RL DN
Sbjct: 160 IQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVVRKALLQVSSRLHDN 213
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R+LC+ VG VIGKGG II+ ++ E+GAFI V ++ E D+ +ITV+A E E
Sbjct: 278 KEFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A V + R E T + + S RL+V+++++GCL+GKGG+II+E+
Sbjct: 337 PISPTIDATVRLQPRCSEKTDPESGEPS------YTTRLLVSTSRIGCLIGKGGSIITEI 390
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R+ + +IRI+S + + K SE++ +VQISG+ K A+ +T RL+ N F
Sbjct: 391 RRTSRANIRILSKENVPKVASEDEEMVQISGDLDVAKHALVQITTRLKANFF 442
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT--MPEC 228
+V R+L +D++G +IGKGG II+ ++S+ G+ I V +T +P C
Sbjct: 137 QVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHLPAC 182
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 108/174 (62%), Gaps = 11/174 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS-------EG 240
+R LC++ K+G++IG+GG I + L+++ A I +G ++P CDER+IT+ +S E
Sbjct: 42 YRYLCTSRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIED 101
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTI 299
E + PAQ A+ V +LI + D + +GL V RL+V S+Q+GC++GKGG I
Sbjct: 102 TEDKVCPAQDALFRVHEKLI--ADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHI 159
Query: 300 ISEMRKVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I +R TG+ IR++S++ L C D ++QISG+ V+ A+ V+ RL DN
Sbjct: 160 IQGIRSDTGSQIRVLSNERLPACGISGDELLQISGDPLVVRKALLQVSSRLHDN 213
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
++ S R+LC+ VG VIGKGG II+ ++ E+GAFI V ++ E D+ +ITV+A E E
Sbjct: 278 KDFSLRLLCAASDVGGVIGKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A V + + E T + + S RL+V+++Q+GCL+GKGG+II+E+
Sbjct: 337 PVSPTIDATVRLQPKCSEKTDPESGEPS------YTTRLLVSTSQIGCLIGKGGSIITEI 390
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R+ + +IRI+S + + K SE++ +VQISG+ + A+ +T RL+ N F
Sbjct: 391 RRTSRANIRILSKENVPKVASEDEEMVQISGDLEVARHALVQITTRLKANFF 442
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+V+ R+L +D++G +IGKGG II+ ++S+ G+ I V +P C
Sbjct: 137 QVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERLPAC 182
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 12/178 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS----- 238
++ +R LC K+G+VIG+GG I++ L+ + + I +G T+P DER+IT+ ++
Sbjct: 41 EDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETN 100
Query: 239 --EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSS-NKGLLVNARLVVASNQVGCLLGK 295
E SPAQ+A+ + R++ ++ +D S G V ARL+V S+Q+GC++GK
Sbjct: 101 SLEESSDYVSPAQEALFKIHDRVV---ADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGK 157
Query: 296 GGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
GG I+ +R TG +RI+ D L +C +D +VQISGE VK A+Y + RL DN
Sbjct: 158 GGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDN 215
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C + +G VIGKGG II ++ E A I V ++ E D+ LI +++ E E
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFED 328
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
YSP +A + RL SEK + G++ RL+V ++++GCL+GKGG II+E
Sbjct: 329 SYSPTLEAAL----RLQPRCSEK---VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITE 381
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+R++T +IRI+S + L K E+D +VQISG+ K+A+ ++ RLR N F
Sbjct: 382 LRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 434
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 45/187 (24%)
Query: 171 SDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+D D+ +V+ R+L +D++G +IGKGG I++ +++E GA + + +P C
Sbjct: 125 ADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRC 184
Query: 229 -----------DERLITVTASEGPESR-------------------YS-------PAQKA 251
E LI A SR YS P A
Sbjct: 185 ALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAPTHGA 244
Query: 252 VVLVFSRLIE---GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
++ + L+ G D SS + + RL+ + +G ++GKGG II+++R+ T
Sbjct: 245 PIMGLAPLVSPYGGYKAPREDLSSKE---FSLRLICPTENIGGVIGKGGAIINQIRQETK 301
Query: 309 TSIRIIS 315
+I++ S
Sbjct: 302 AAIKVDS 308
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 12/178 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS----- 238
++ +R LC K+G+VIG+GG I++ L+ + + I +G T+P DER+IT+ ++
Sbjct: 41 EDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETN 100
Query: 239 --EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSS-NKGLLVNARLVVASNQVGCLLGK 295
E SPAQ+A+ + R++ ++ +D S G V ARL+V S+Q+GC++GK
Sbjct: 101 SLEESSDYVSPAQEALFKIHDRVV---ADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGK 157
Query: 296 GGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
GG I+ +R TG +RI+ D L +C +D +VQISGE VK A+Y + RL DN
Sbjct: 158 GGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDN 215
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C + +G VIGKGG II ++ E A I V ++ E D+ LI +++ E E
Sbjct: 269 KEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFED 328
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
YSP +A + RL SEK + G++ RL+V ++++GCL+GKGG II+E
Sbjct: 329 SYSPTLEAAL----RLQPRCSEK---VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITE 381
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+R++T +IRI+S + L K E+D +VQISG+ K+A+ ++ RLR N F
Sbjct: 382 LRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 434
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 45/187 (24%)
Query: 171 SDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+D D+ +V+ R+L +D++G +IGKGG I++ +++E GA + + +P C
Sbjct: 125 ADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRC 184
Query: 229 -----------DERLITVTASEGPESR-------------------YS-------PAQKA 251
E LI A SR YS P A
Sbjct: 185 ALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAPTHGA 244
Query: 252 VVLVFSRLIE---GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
++ + L+ G D SS + + RL+ + +G ++GKGG II+++R+ T
Sbjct: 245 PIMGLAPLVSPYGGYKAPREDLSSKE---FSLRLICPTENIGGVIGKGGAIINQIRQETK 301
Query: 309 TSIRIIS 315
+I++ S
Sbjct: 302 AAIKVDS 308
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 114/206 (55%), Gaps = 32/206 (15%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--TASEGPESR 244
++RILC + K G VIGK G+II++++ GA+I+V +P +ER+I + T PE R
Sbjct: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDPEGR 120
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGL------------DFSSNKGLLVN-------ARL 282
+SPAQ+A+ L+ R++E G D+ +G RL
Sbjct: 121 MPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRL 180
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKD 340
VV+ VGCLLGKGG II +MR T T IRI+ L +CIS ++ +VQI G+ + VK
Sbjct: 181 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKK 240
Query: 341 AVYNVTGRLRD------NHFSGTLNT 360
A+ V+ RLR+ +HF G L++
Sbjct: 241 AIAIVSSRLRESQHRDRSHFHGRLHS 266
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 103/169 (60%), Gaps = 10/169 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+++ F+ILC +KV +VIG+ II L+++ G I V + +E+++ +++ EGP+
Sbjct: 332 EDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDD 391
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
PAQ+A++ + +R++ D +K +V RL+V S+ +GCL G+ G+++ EM
Sbjct: 392 ELFPAQEALLHIQTRIV--------DLVPDKENIVTTRLLVPSSDIGCLEGRDGSLL-EM 442
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+++TG ++ I+ + L +S D +VQI G+ +DA+ +T RLR+
Sbjct: 443 KRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRN 491
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS-------EG 240
+R LC++ K+G++IG+GG I + L++E A I +G ++P C+ER+IT+ +S +
Sbjct: 40 YRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDD 99
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEK-GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
E + PAQ A+ V RL T E G + S V RL+V S+Q+GC+LGKGG I
Sbjct: 100 AEDKVCPAQDALFRVHERL--ATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHI 157
Query: 300 ISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I +R TG IR++S D + C D ++QISG+ VK A+ V+ RL +N
Sbjct: 158 IQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNN 211
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 105/173 (60%), Gaps = 8/173 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER-LITVTASEGPE 242
+E S R+LC+ VG VIGKGG II+ ++ E+GA I V ++ + D+ +ITV+A E E
Sbjct: 276 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFE 335
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SP A V + R E + + + S RL+V+++++GCL+GKGG+II+E
Sbjct: 336 DPVSPTIDAAVRLQLRCSEKSDSELAEQS------YTTRLLVSTSRIGCLIGKGGSIITE 389
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+R+ + +IRI+S + + K +E++ +VQISG + A+ + RL+ N F
Sbjct: 390 IRRTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFF 442
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT--MPEC 228
+V+ R+L +D++G ++GKGG II+ ++SE GA I V + +P C
Sbjct: 135 QVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPAC 180
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS-------EG 240
+R LC++ K+G++IG+GG I + L++E A I +G ++P C+ER+IT+ +S +
Sbjct: 40 YRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDD 99
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEK-GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
E + PAQ A+ V RL T E G + S V RL+V S+Q+GC+LGKGG I
Sbjct: 100 AEDKVCPAQDALFRVHERL--ATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHI 157
Query: 300 ISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I +R TG IR++S D + C D ++QISG+ VK A+ V+ RL +N
Sbjct: 158 IQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNN 211
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 105/173 (60%), Gaps = 8/173 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER-LITVTASEGPE 242
+E S R+LC+ VG VIGKGG II+ ++ E+GA I V ++ + D+ +ITV+A E E
Sbjct: 276 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFE 335
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SP A V + R E + + + S RL+V+++++GCL+GKGG+II+E
Sbjct: 336 DPVSPTIDAAVRLQLRCSEKSDSELAEQS------YTTRLLVSTSRIGCLIGKGGSIITE 389
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+R+ + +IRI+S + + K +E++ +VQISG + A+ + RL+ N F
Sbjct: 390 IRRTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANFF 442
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT--MPEC 228
+V+ R+L +D++G ++GKGG II+ ++SE GA I V + +P C
Sbjct: 135 QVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPAC 180
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV------- 235
+ + FR LC K+G+VIG+GG I++ L+ + + I +G +P CDER+IT+
Sbjct: 41 RDDTVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDET 100
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
A E SPAQ A+ + R++ ++ + SS V A+L+V S+Q+GC+LG+
Sbjct: 101 NAFGDGEKVLSPAQDALFRIHDRVVADDAQS--EDSSEGEQQVTAKLLVPSDQIGCILGR 158
Query: 296 GGTIISEMRKVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
GG I+ +R TG IRII D+ + C +D ++QISGE VK A++ + RL +N
Sbjct: 159 GGQIVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALHQIASRLHEN 216
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 105/172 (61%), Gaps = 9/172 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E R++ + + +VIGKGG +I L+ E A I V ++ E ++ LIT++A E E
Sbjct: 279 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 338
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISEM 303
YSP +AV+ RL SEK + GL+ RL+V S+++GC+LGKGG II+EM
Sbjct: 339 YSPTIEAVM----RLQPKCSEK---VERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEM 391
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R++T +IRI+ + L K S++D +VQISGE K+A+ +T RLR N F
Sbjct: 392 RRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVF 443
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 7/64 (10%)
Query: 172 DRVATLDARTQ-----QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GAT 224
DRV DA+++ +Q+V+ ++L +D++G ++G+GG I++ ++SE GA I +
Sbjct: 122 DRVVADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIKDRN 181
Query: 225 MPEC 228
MP C
Sbjct: 182 MPLC 185
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 175/361 (48%), Gaps = 38/361 (10%)
Query: 8 EANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSL 67
E N+ E + A Q+++ R + +L E +R D H+ I T+R
Sbjct: 98 ETNVSEDTGDLISPA-QDALFRVHDRVLAEDLRMDEDLEDHQQI----------TVRM-- 144
Query: 68 EAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLF 127
VP D I + Q I E+G Q +R P + S E L I + +
Sbjct: 145 -LVPSDQIGCVIGKGGQVIQNLRSETGAQ--IRVLSSEHLPPCALNSDELLQITGEGAVV 201
Query: 128 GAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRP-LSLESDRVATL--------- 177
++ LH D S+ L ++PS S V P + V +L
Sbjct: 202 KKALYQVAARLH-DNPSRSQHQLLSSPSIFRSGAGFVNPHAGTQVMGVTSLMGPYASYKS 260
Query: 178 DARTQQ---QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
D R++ +E + R++C + VGAVIGKGG II+ L+ E+GA I V + E D+ +I
Sbjct: 261 DGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIF 320
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
V+A E E + SP A + + R E T ++ D ++ RL+V S++VGCL+G
Sbjct: 321 VSAKEAFEDQ-SPTIDATMRLQPRSSEKTEKESGD------AILTTRLLVPSSRVGCLIG 373
Query: 295 KGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
KGG+II+EMR T SIR++S + L K SE+D +VQI+G+ + +A+ V RLR N
Sbjct: 374 KGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLMRLRANT 433
Query: 354 F 354
F
Sbjct: 434 F 434
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 10/177 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV-------T 236
++ FR LC K+G++IG GG I + L++E + I + T+P C+ER++T+
Sbjct: 41 EDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETN 100
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
SE SPAQ A+ V R++ D ++ + V R++V S+Q+GC++GKG
Sbjct: 101 VSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITV--RMLVPSDQIGCVIGKG 158
Query: 297 GTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G +I +R TG IR++ S+ L C +D ++QI+GE + VK A+Y V RL DN
Sbjct: 159 GQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHDN 215
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 175/361 (48%), Gaps = 38/361 (10%)
Query: 8 EANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSL 67
E N+ E + A Q+++ R + +L E +R D H+ I T+R
Sbjct: 98 ETNVSEDTGDLISPA-QDALFRVHDRVLAEDLRMDEDLEDHQQI----------TVRM-- 144
Query: 68 EAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLF 127
VP D I + Q I E+G Q +R P + S E L I + +
Sbjct: 145 -LVPSDQIGCVIGKGGQVIQNLRSETGAQ--IRVLSSEHLPPCALNSDELLQITGEGAVV 201
Query: 128 GAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRP-LSLESDRVATL--------- 177
++ LH D S+ L ++PS S V P + V +L
Sbjct: 202 KKALYQVAARLH-DNPSRSQHQLLSSPSIFRSGAGLVNPHAGTQVMGVTSLMGPYASYKS 260
Query: 178 DARTQQ---QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
D R++ +E + R++C + VGAVIGKGG II+ L+ E+GA I V + E D+ +I
Sbjct: 261 DGRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIF 320
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
V+A E E + SP A + + R E T ++ D ++ RL+V S++VGCL+G
Sbjct: 321 VSAKEAFEDQ-SPTIDATMRLQPRSSEKTEKESGD------AILTTRLLVPSSRVGCLIG 373
Query: 295 KGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
KGG+II+EMR T SIR++S + L K SE+D +VQI+G+ + +A+ V RLR N
Sbjct: 374 KGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLMRLRANT 433
Query: 354 F 354
F
Sbjct: 434 F 434
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 102/177 (57%), Gaps = 10/177 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV-------T 236
++ FR LC K+G++IG GG I + L++E + I + T+P C+ER++T+
Sbjct: 41 EDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETN 100
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
SE SPAQ A+ V R++ D ++ + V R++V S+Q+GC++GKG
Sbjct: 101 VSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITV--RMLVPSDQIGCVIGKG 158
Query: 297 GTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G +I +R TG IR++ S+ L C +D ++QI+GE + VK A+Y V RL DN
Sbjct: 159 GQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHDN 215
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 18/185 (9%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS--EGPESR 244
++RILC + K G VIGK GTII++++ GA+I+V +P ER+I ++ + P+ R
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDGR 128
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGL---------DF--SSNKGLLVNARLVVASNQVG 290
+SPAQ+A+ V R++E ++ G D+ G V RLVV+ VG
Sbjct: 129 MPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVG 188
Query: 291 CLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
CLLGKGG II +MR T T IRI+ L +C+S ++ +VQI GE + VK+A+ V+ R
Sbjct: 189 CLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSR 248
Query: 349 LRDNH 353
LR++
Sbjct: 249 LRESQ 253
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 106/172 (61%), Gaps = 10/172 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ F+ILC DK+ V+G+ II LQ+E G + V + DE++IT+++ E P+
Sbjct: 323 EELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDD 382
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ PAQ+A++ + +++I D +K L+ RL+V S CL GK G+ +SE+
Sbjct: 383 PFFPAQEALLHIQTQII--------DLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEI 433
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++TGTS++I++ +++ +C S ND V+QI+GE ++A+ +T LR + F
Sbjct: 434 SRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMF 485
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 18/185 (9%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS--EGPESR 244
++RILC + K G VIGK GTII++++ GA+I+V +P ER+I ++ + P+ R
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDGR 128
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGL---------DF--SSNKGLLVNARLVVASNQVG 290
+SPAQ+A+ V R++E ++ G D+ G V RLVV+ VG
Sbjct: 129 MPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVG 188
Query: 291 CLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
CLLGKGG II +MR T T IRI+ L +C+S ++ +VQI GE + VK+A+ V+ R
Sbjct: 189 CLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSR 248
Query: 349 LRDNH 353
LR++
Sbjct: 249 LRESQ 253
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 106/172 (61%), Gaps = 10/172 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ F+ILC DK+ V+G+ II LQ+E G + V + DE++IT+++ E P+
Sbjct: 323 EELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDD 382
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ PAQ+A++ + +++I D +K L+ RL+V S CL GK G+ +SE+
Sbjct: 383 PFFPAQEALLHIQTQII--------DLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEI 433
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++TGTS++I++ +++ +C S ND V+QI+GE ++A+ +T LR + F
Sbjct: 434 SRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMF 485
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 109/185 (58%), Gaps = 18/185 (9%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS--EGPESR 244
++RILC + K G VIGK GTII++++ GA+I+V +P ER+I ++ + P+ R
Sbjct: 70 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEISDNRRRDPDGR 129
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGL---------DF--SSNKGLLVNARLVVASNQVG 290
+SPAQ+A+ V R++E + G D+ G V RLVV+ VG
Sbjct: 130 MPSFSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRPGGGRVVTRLVVSRMHVG 189
Query: 291 CLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
CLLGKGG II +MR T T IRI+ L +C+S ++ +VQI GE S VK+A+ V+ R
Sbjct: 190 CLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELSAVKNALLIVSSR 249
Query: 349 LRDNH 353
LR++
Sbjct: 250 LRESQ 254
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 107/172 (62%), Gaps = 10/172 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ F+ILC DK+ V+G+ I+ LQ+E G + V + DE++IT+++ E P+
Sbjct: 323 EELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSEEAPDD 382
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ PAQ+A++ + +++I D +K L+ RL+V+S CL GK G+ +SE+
Sbjct: 383 PFFPAQEALLHIQTQII--------DLLPDKDNLITTRLLVSSRDSVCLEGKAGS-VSEI 433
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++TGTS++I++ +++ +C S ND V+QI+G+ +DA+ +T LR + F
Sbjct: 434 SRLTGTSVQILAREEIPRCASINDVVIQITGDIRAARDALVELTLLLRSHMF 485
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/219 (40%), Positives = 127/219 (57%), Gaps = 18/219 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R+LC NDK+G VIGKGG I++++++ GA I V E DER+I V+A+E +
Sbjct: 314 EEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADD 373
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
R SP +AV+L+ + GT++K S+ R +V S +GCLLGKGG IISEM
Sbjct: 374 RVSPTIEAVLLLQGK-TSGTTDKDGAIST--------RFLVPSKHIGCLLGKGGNIISEM 424
Query: 304 RKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
RK T +IRI D+ C+SEN+ +VQ++GE KDA+ + RLR+N F +
Sbjct: 425 RKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFK---DKDG 481
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAV-SHDFSQP 400
+T SVL P S L P++ + SS +D P
Sbjct: 482 ASNTDSVL----PLSSLSVPSAVPLSSSYGTRKYDIVSP 516
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 20/178 (11%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS- 246
+RILC ++ +G+VIGKGG +I++++ E + I V +P DER+I + +S P S+
Sbjct: 44 YRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSS--PLSKDKE 101
Query: 247 --------------PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
PAQ ++ V S +++ +S G D ++K +ARL+VA++Q+G L
Sbjct: 102 KDDDDDDNENEPVCPAQDGLLRVHSVIVQESS--GKDNDADKKRPQDARLLVANSQIGSL 159
Query: 293 LGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+GKGG I ++R +G I+I D+L C D +V ISG+ + VK A+Y V+ L
Sbjct: 160 IGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFL 217
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 24/186 (12%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG I++AL+ E A I V ++P DER+I +
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E E + S AQ A++ + +++ E E D SS+ V AR++V
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDD---VTARILV 158
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 159 QGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALY 218
Query: 344 NVTGRL 349
++ RL
Sbjct: 219 EISTRL 224
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASE 239
++ +E S RILC+++ +G+VIGK G +R ++ + GA I V + ERLI V+++E
Sbjct: 285 SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNE 344
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P SP +A++L+ + + +SEK + RLVV SN+VGC+LG+GG +
Sbjct: 345 IPTEPISPTIEALILLHDK-VSASSEKHHS---------STRLVVPSNKVGCILGEGGQV 394
Query: 300 ISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
I+EMR+ TG IR+ S K +S D +VQ++G + + A+ + RLR
Sbjct: 395 ITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLR-------- 446
Query: 359 NTARTRSTSSVLTETSPYSRLKDP 382
RT +S P++ DP
Sbjct: 447 --TRTLRDTSTANNPPPFAPSDDP 468
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 106/173 (61%), Gaps = 9/173 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II ++ ++GA I V ++ E D+ LI ++ E +
Sbjct: 12 REFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDD 71
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISE 302
+SP +A V RL S+K + G++ RL+V S+++GCL+GKGGTII+E
Sbjct: 72 SFSPTIEAAV----RLQPRCSDK---VERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITE 124
Query: 303 MRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
MR++T +IRI+ + L K SE+D +VQISG+ KDA+ V RL+ N F
Sbjct: 125 MRRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLF 177
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 104/177 (58%), Gaps = 10/177 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
++ +R LC K+G++IG+GG I + L+SE + I +G TMP C+ER++T+ +S +
Sbjct: 107 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 166
Query: 244 RY-------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ SPAQ A+ V R++ G E D + V R++V S+Q+GC++GKG
Sbjct: 167 PFGDTGELVSPAQDALFRVHDRIVAG--ELPADEEPEEAQQVTVRMLVPSDQIGCVIGKG 224
Query: 297 GTIISEMRKVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G +I +R T IRI+ D+ L C +D ++QI G+ S V+ A++ + RL +N
Sbjct: 225 GQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHEN 281
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II+ ++ E+GA I V ++ E D+ +I ++A E E
Sbjct: 318 KEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED 377
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A + RL SEK SS+ +V RL+V S+++GCL+GKGG IISEM
Sbjct: 378 P-SPTIDAAL----RLQPRCSEKAERESSDS--VVTTRLLVPSSRIGCLIGKGGAIISEM 430
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
R VT +IRI+S + L K SE+D +VQI+GE + +A+ VT RL+ N F A
Sbjct: 431 RSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFEREGAIAA 490
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSS 390
T L P S + D + +G S
Sbjct: 491 IPPTLPYL----PMSDMSDGSKYGSRDS 514
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+ Q+V+ R+L +D++G VIGKGG +I+ ++SE A I + +P C
Sbjct: 202 EAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPC 250
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 21/186 (11%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG I++AL+ E A I V ++P DER+I +
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E E + S AQ A++ + +++ E E D S V AR++V
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALY 221
Query: 344 NVTGRL 349
++ RL
Sbjct: 222 EISTRL 227
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 130/252 (51%), Gaps = 40/252 (15%)
Query: 101 RPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISY 160
RPLE S+ R E+ +++ ++ + LP LH D T P
Sbjct: 236 RPLEEIIDASTQRKRESPTLQHEYSM--------LPHLHSD---------HTPPI----- 273
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
PL L+ R T+ +E S RILC+++ +G+VIGK G +R ++ + GA I
Sbjct: 274 -----PL-LDPYRSGPQYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 221 VGATMPECD-ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V + ERLI ++++E P SPA +A++L+ + + SEK +
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDK-VSAPSEKHHS---------S 377
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKV 338
RLVV S++VGC++G+GG +I++MR+ TG IR+ S K +S +D +VQ++G +
Sbjct: 378 TRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIA 437
Query: 339 KDAVYNVTGRLR 350
+ A+ + RLR
Sbjct: 438 RGALTEIASRLR 449
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 172 DRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
D VA + +V+ RIL ++VG ++GKGG+II+ L+S GA I V +P+C
Sbjct: 141 DEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQC 199
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 21/186 (11%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG I++AL+ E A I V ++P DER+I +
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E E + S AQ A++ + +++ E E D S V AR++V
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALY 221
Query: 344 NVTGRL 349
++ RL
Sbjct: 222 EISTRL 227
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 130/252 (51%), Gaps = 40/252 (15%)
Query: 101 RPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISY 160
RPLE S+ R E+ +++ ++ + LP LH D T P
Sbjct: 236 RPLEEIIDASTQRKRESPTLQHEYSM--------LPHLHSD---------HTPPI----- 273
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
PL L+ R T+ +E S RILC+++ +G+VIGK G +R ++ + GA I
Sbjct: 274 -----PL-LDPYRSGPQYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 221 VGATMPECD-ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V + ERLI ++++E P SPA +A++L+ + + SEK +
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDK-VSAPSEKHHS---------S 377
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKV 338
RLVV S++VGC++G+GG +I++MR+ TG IR+ S K +S +D +VQ++G +
Sbjct: 378 TRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIA 437
Query: 339 KDAVYNVTGRLR 350
+ A+ + RLR
Sbjct: 438 RGALTEIASRLR 449
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 172 DRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
D VA + +V+ RIL ++VG ++GKGG+II+ L+S GA I V +P+C
Sbjct: 141 DEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQC 199
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 24/186 (12%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG I++AL+ E A I V ++P DER+I +
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E E + S AQ A++ + +++ E E D SS+ V AR++V
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDD---VTARILV 158
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 159 QGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALY 218
Query: 344 NVTGRL 349
++ RL
Sbjct: 219 EISTRL 224
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 94/154 (61%), Gaps = 12/154 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASE 239
++ +E S RILC+++ +G+VIGK G +R ++ + GA I V + ERLI V+++E
Sbjct: 285 SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNE 344
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P SP +A++L+ + + +SEK SS RLVV SN+VGC+LG+GG +
Sbjct: 345 IPTEPISPTIEALILLHDK-VSASSEK--HHSS-------TRLVVPSNKVGCILGEGGQV 394
Query: 300 ISEMRKVTGTSIRIISD-QLLKCISENDRVVQIS 332
I+EMR+ TG IR+ S K +S D +VQ++
Sbjct: 395 ITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVT 428
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 104/177 (58%), Gaps = 10/177 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
++ +R LC K+G++IG+GG I + L+SE + I +G TMP C+ER++T+ +S +
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 244 RY-------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ SPAQ A+ V R++ G E D + V R++V S+Q+GC++GKG
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAG--ELPADEEPEEAQQVTVRMLVPSDQIGCVIGKG 158
Query: 297 GTIISEMRKVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G +I +R T IRI+ D+ L C +D ++QI G+ S V+ A++ + RL +N
Sbjct: 159 GQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHEN 215
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II+ ++ E+GA I V ++ E D+ +I ++A E E
Sbjct: 252 KEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED 311
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A + RL SEK SS+ +V RL+V S+++GCL+GKGG IISEM
Sbjct: 312 P-SPTIDAAL----RLQPRCSEKAERESSDS--VVTTRLLVPSSRIGCLIGKGGAIISEM 364
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
R VT +IRI+S + L K SE+D +VQI+GE + +A+ VT RL+ N F A
Sbjct: 365 RSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFEREGAIAA 424
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSS 390
T L P S + D + +G S
Sbjct: 425 IPPTLPYL----PMSDMSDGSKYGSRDS 448
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+ Q+V+ R+L +D++G VIGKGG +I+ ++SE A I + +P C
Sbjct: 136 EAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPC 184
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 14/186 (7%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
T + E+ R+LC DK+G VIGKGG+ I++++ +GA I V T + DE +ITV A+
Sbjct: 299 GNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIAT 358
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E P+ S A +A++L+ ++ + ++ +V R +V S +GC++GK G
Sbjct: 359 ESPDDLKSMAVEAILLLQGKINDEDND-----------IVGIRFLVPSKVIGCIIGKSGA 407
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF---S 355
I++E+RK T + I LKC ND +V+++GE V+DA+ + RLRD+
Sbjct: 408 IVNEIRKRTNADVCISKVDKLKCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKD 467
Query: 356 GTLNTA 361
G LN++
Sbjct: 468 GGLNSS 473
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 17/177 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR- 244
V +RILC ++ +G+VIGK G +I ++++E+ A + V P R+IT+ + +
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDA 95
Query: 245 -----------YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
PAQ A++ V + + + G D +++V ++Q ++
Sbjct: 96 DVDDDFHQADPLCPAQDALLKVHAAISNAVAALG-DSDKRCRDKKECQILVPTSQSANII 154
Query: 294 GKGGTIISEMRKVTGTSIRII----SDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
GK G I ++R T +I+I SD C + D + I+GE VK A++ V+
Sbjct: 155 GKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNFLLITGESEAVKKALFAVS 211
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 102/179 (56%), Gaps = 10/179 (5%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV------ 235
+ + FR LC K+G+VIG+GG I++ L+++ + I +G +P CDER+IT+
Sbjct: 46 DRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDE 105
Query: 236 -TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
A E SPAQ A+ + R++ + + S V A+L+V S+Q+GC+LG
Sbjct: 106 TNAFGDGEKVLSPAQDALFRIHDRVVADDARS--EDSPEGEKQVTAKLLVPSDQIGCILG 163
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GG I+ +R TG IRI+ D+ + C +D ++QISGE VK A+ + RL +N
Sbjct: 164 RGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHEN 222
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 9/172 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E R++ + + +VIGKGG +I L+ E A I V ++ E ++ LIT++A E E
Sbjct: 283 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 342
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISEM 303
YSP +AV+ RL S+K + GL+ RL+V S+++GC+LGKGG II+EM
Sbjct: 343 YSPTIEAVM----RLQPKCSDK---VERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEM 395
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R++T +IRI+ + L K S++D +VQISGE K+A+ +T RLR N F
Sbjct: 396 RRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVF 447
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 62/200 (31%)
Query: 172 DRVATLDARTQ-----QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GAT 224
DRV DAR++ +++V+ ++L +D++G ++G+GG I++ ++SE GA I +
Sbjct: 128 DRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRN 187
Query: 225 MPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-----L 276
MP C + LI ++ +KA++ + SRL E S SS+ G L
Sbjct: 188 MPLCALNSDELIQISGE------VLIVKKALLQIASRLHENPSRSQNLLSSSGGYPAGSL 241
Query: 277 LVNA-----------------------------------------RLVVASNQVGCLLGK 295
+ +A RLV + ++GK
Sbjct: 242 MSHAGGPRLVGLAPLMGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGK 301
Query: 296 GGTIISEMRKVTGTSIRIIS 315
GG +I+++R+ T +I++ S
Sbjct: 302 GGALINQLRQETRATIKVDS 321
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 24/186 (12%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG I++AL+ E A I V ++P DER+I +
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E E + S AQ A++ + +++ E E D SS+ V AR++V
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDD---VTARILV 158
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 159 QGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALY 218
Query: 344 NVTGRL 349
++ RL
Sbjct: 219 EISTRL 224
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%), Gaps = 12/162 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASE 239
++ +E S RILC+++ +G+VIGK G +R ++ + GA I V + ERLI V+++E
Sbjct: 285 SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNE 344
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P SP +A++L+ + + +SEK SS RLVV SN+VGC+LG+GG +
Sbjct: 345 IPTEPISPTIEALILLHDK-VSASSEK--HHSST-------RLVVPSNKVGCILGEGGQV 394
Query: 300 ISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKD 340
I+EMR+ TG IR+ S K +S D +VQ +G+ ++D
Sbjct: 395 ITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHGLED 436
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 39/186 (20%)
Query: 164 VRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
+ L L D+V+ A +++ S R++ ++KVG ++G+GG +I ++ GA I V
Sbjct: 354 IEALILLHDKVS---ASSEKHHSSTRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRV-- 408
Query: 224 TMPECDERLITVTASEGPESRYSPAQKAVVLVFS-RLIEGTSE-------KGLDFSSNKG 275
YS A K L F L++ + +GL +S +
Sbjct: 409 ---------------------YSKADKPKYLSFGDELVQAAGQIHGLEDYRGLPSASGR- 446
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
L + ++ + ++G GG ++E+R+++G +R+ ++ VV+I G
Sbjct: 447 FSSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAHA----GSSESVVEIQGTL 502
Query: 336 SKVKDA 341
+ K A
Sbjct: 503 DQAKAA 508
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 105/186 (56%), Gaps = 21/186 (11%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG I++AL+ E A I V ++P DER+I +
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E E + S AQ A++ + +++ E E D S V AR++V
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALY 221
Query: 344 NVTGRL 349
++ RL
Sbjct: 222 EISTRL 227
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 40/242 (16%)
Query: 101 RPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISY 160
RPLE S+ R E+ +++ ++ + LP LH D T P
Sbjct: 236 RPLEEIIDASTQRKRESPTLQHEYSM--------LPHLHSD---------HTPPI----- 273
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
PL L+ R T+ +E S RILC+++ +G+VIGK G +R ++ + GA I
Sbjct: 274 -----PL-LDPYRSGPQYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 221 VGATMPECD-ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V + ERLI ++++E P SPA +A++L+ + + SEK SS
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDK-VSAPSEK--HHSST------ 378
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKV 338
RLVV S++VGC++G+GG +I++MR+ TG IR+ S K +S +D +VQ +G+
Sbjct: 379 -RLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHGR 437
Query: 339 KD 340
+D
Sbjct: 438 ED 439
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 163 AVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG 222
A+ L L D+V+ A +++ S R++ + KVG +IG+GG +I ++ GA I V
Sbjct: 356 AIEALILLHDKVS---APSEKHHSSTRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRV- 411
Query: 223 ATMPECDERLITVTASEGPESRYSPAQKAVVLVF-------SRLIEGTSEKGLDFSSNKG 275
YS A K L F + I G + S+
Sbjct: 412 ----------------------YSKADKPKYLSFDDELVQAAGQIHGREDYREPTSATGR 449
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
L L + ++ +G ++G GG ++E+R+V+G +R+ ++ VV+I G
Sbjct: 450 FLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAHA----GSSESVVEIQGTL 505
Query: 336 SKVKDAVYNVTGRLRDN 352
+ K A + G + N
Sbjct: 506 DQAKAAQSLLQGFISAN 522
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 172 DRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
D VA + +V+ RIL ++VG ++GKGG+II+ L+S GA I V +P+C
Sbjct: 141 DEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQC 199
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 24/186 (12%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG I++AL+ E A I V ++P DER+I +
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVV 284
E E + S AQ A++ + +++ E E D SS+ V AR++V
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDD---VTARILV 158
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 159 QGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALY 218
Query: 344 NVTGRL 349
++ RL
Sbjct: 219 EISTRL 224
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 103/172 (59%), Gaps = 12/172 (6%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASE 239
++ +E S RILC+++ +G+VIGK G +R ++ + GA I V + ERLI V+++E
Sbjct: 285 SETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNE 344
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P SP +A++L+ + + +SEK SS RLVV SN+VGC+LG+GG +
Sbjct: 345 IPTEPISPTIEALILLHDK-VSASSEK--HHSST-------RLVVPSNKVGCILGEGGQV 394
Query: 300 ISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
I+EMR+ TG IR+ S K +S D +VQ++G + + A+ + RLR
Sbjct: 395 ITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLR 446
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 106/186 (56%), Gaps = 21/186 (11%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------T 236
E +RILC K+G+V+G+GG +++AL+ E A I V +P DER+I +
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPEL 101
Query: 237 ASEGPESRYSP----------AQKAVVLVFSRLIEGTSEKGL--DFSSNKGLLVNARLVV 284
E E+++S AQ A++ + +++ G+ + S V AR++V
Sbjct: 102 TDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILV 161
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVY 343
NQVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKALY 221
Query: 344 NVTGRL 349
++ RL
Sbjct: 222 EISTRL 227
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 96/162 (59%), Gaps = 12/162 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASE 239
T+ +E S RILC+++ +G+VIGK G ++ ++ + GA I V + E LI V++ E
Sbjct: 289 TETEEFSIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKE 348
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P SPA +A++L+ + + SEK SS RLVV S++VGC+LG+GG +
Sbjct: 349 VPSEPISPAIEALILLHDK-VSAPSEK--RHSST-------RLVVPSSKVGCILGEGGKV 398
Query: 300 ISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKD 340
I+EMR+ TG IR+ S K +S +D +VQ +G+ +D
Sbjct: 399 ITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAGQIHGRED 440
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 154 PSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQS 213
PS IS A+ L L D+V+ A ++++ S R++ + KVG ++G+GG +I ++
Sbjct: 350 PSEPIS--PAIEALILLHDKVS---APSEKRHSSTRLVVPSSKVGCILGEGGKVITEMRR 404
Query: 214 EAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTS------EKG 267
GA I V YS A K L F + T+ E
Sbjct: 405 RTGAEIRV-----------------------YSKADKPKYLSFDDELVQTAGQIHGREDY 441
Query: 268 LDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDR 327
+S G L L + ++ + ++G GG ++E+R+++G +R+ ++
Sbjct: 442 RGLTSATGFLSTIELRIPNSSLESIVGVGGVNLAEIRQISGARLRLHEAH----AGSSES 497
Query: 328 VVQISGEFSKVKDAVYNVTGRLRDN 352
VV+I G + K A + G + N
Sbjct: 498 VVEIQGTLEEAKAAQSLLQGFISAN 522
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 172 DRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
D VA + +V+ RIL ++VG ++GKGG+II+ L+S+ GA I V +P+C
Sbjct: 141 DGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQC 199
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 102/178 (57%), Gaps = 10/178 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV------- 235
+ + FR LC K+G+VIG+GG I++ L+++ + I +G +P CDER+IT+
Sbjct: 47 RDDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDET 106
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
A E SPAQ A+ + R++ + + S V A+L+V S+Q+GC+LG+
Sbjct: 107 NAFGDGEKVLSPAQDALFRIHDRVVADDARS--EDSPEGEKQVTAKLLVPSDQIGCILGR 164
Query: 296 GGTIISEMRKVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
GG I+ +R TG IRI+ D+ + C +D ++QISGE VK A+ + RL +N
Sbjct: 165 GGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHEN 222
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 107/178 (60%), Gaps = 11/178 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E R++ + + +VIGKGG +I L+ E A I V ++ E ++ LIT++A E E
Sbjct: 283 EFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDA 342
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISEM 303
YSP +AV+ RL S+K + GL+ RL+V S+++GC+LGKGG II+EM
Sbjct: 343 YSPTIEAVM----RLQPKCSDK---VERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEM 395
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNT 360
R++T +IRI+ + L K S++D +VQ++ +K ++ + RLR +F+ ++N+
Sbjct: 396 RRMTKANIRILGKENLPKVASDDDEMVQVNFMVLLLKFSLQFLLSRLR--YFTWSVNS 451
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 66/217 (30%)
Query: 172 DRVATLDARTQ-----QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GAT 224
DRV DAR++ +++V+ ++L +D++G ++G+GG I++ ++SE GA I +
Sbjct: 128 DRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRN 187
Query: 225 MPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-----L 276
MP C + LI ++ +KA++ + SRL E S SS+ G L
Sbjct: 188 MPLCALNSDELIQISGE------VLIVKKALLQIASRLHENPSRSQNLLSSSGGYPAGSL 241
Query: 277 LVNA-----------------------------------------RLVVASNQVGCLLGK 295
+ +A RLV + ++GK
Sbjct: 242 MSHAGGPRLVGLAPLMGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGK 301
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQIS 332
GG +I+++R+ T +I++ S + ND ++ IS
Sbjct: 302 GGALINQLRQETRATIKVDSSR----TEGNDCLITIS 334
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 107/174 (61%), Gaps = 11/174 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS-------EG 240
+R LC++ K+G++IG+GG I + L+S+ A I +G ++P CDER+IT+ +S E
Sbjct: 42 YRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRETNTIED 101
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL-LVNARLVVASNQVGCLLGKGGTI 299
E + PAQ A+ V +L T + ++ + + L V RL+V S+Q+GC++GKGG I
Sbjct: 102 TEDKVCPAQDALFRVHEKL--ATDDGPVNKENEESLGQVTVRLLVPSDQIGCIIGKGGHI 159
Query: 300 ISEMRKVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I +R TG+ IR++S++ L C + D ++ I+G+ V+ A+ V+ RL N
Sbjct: 160 IQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGDPMVVRKALLQVSSRLHGN 213
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 109/172 (63%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R+LC+ VG VIGKGG II+ ++ E+GAFI V ++ E D+ +ITV+A E E
Sbjct: 278 KEFSLRLLCAAANVGGVIGKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A V RL SEK +D S + RL+V+++++GCL+GKGG+II+E+
Sbjct: 337 PVSPTIDATV----RLQPRCSEK-IDAESGEPSYTT-RLLVSTSRIGCLIGKGGSIITEI 390
Query: 304 RKVTGTSIRIISDQ-LLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R+ + +IRIIS Q + K S+++ +V ISG+ + A+ +T RL+ N F
Sbjct: 391 RRTSRANIRIISKQDVPKVASDDEEMVLISGDLDFARHALLQITTRLKANFF 442
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 17/99 (17%)
Query: 172 DRVATLDARTQQQ------EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT- 224
+++AT D ++ +V+ R+L +D++G +IGKGG II+ ++S+ G+ I V +
Sbjct: 118 EKLATDDGPVNKENEESLGQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNE 177
Query: 225 -MPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRL 259
+P C + L+ +T +KA++ V SRL
Sbjct: 178 HLPLCATSGDELLLITGDP------MVVRKALLQVSSRL 210
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--TASEGPESR 244
S+R+LC + + G VIGK G+II++++ GA+I+V + +ER+I + T P+ R
Sbjct: 64 SYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGR 123
Query: 245 ---YSPAQKAVVLVFSRLIEGTS--EKGLDFSSNKGLL---VNARLVVASNQVGCLLGKG 296
+SPAQ+A++L+ RL+E E D+ +G V++RLVV+ VG LLGKG
Sbjct: 124 MPQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLLGKG 183
Query: 297 GTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G II +MR T T IRI+ L +C+S ++ +VQ++G+ VK+A ++ RLR++
Sbjct: 184 GKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRESQ 242
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 99/176 (56%), Gaps = 13/176 (7%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+++ FRILC D+V ++G+ G I+ LQ G + + + DE+++ +T+ EGP
Sbjct: 329 EDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGPND 388
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
PAQ+A++ + + ++ D S + ++ RL+V S+ + CL GK + +SE+
Sbjct: 389 TMFPAQEALLHIQTHIV--------DLSDS---IITTRLIVPSSDIECLDGKNAS-LSEI 436
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
+ TG S++I+ ++L CI+ D +VQI GE ++ + +VT +LR + L
Sbjct: 437 ERSTGASVQILPREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRDIL 492
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 22/191 (11%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI------- 233
+Q E +RILC K+G+V+G+GG I++AL+ E A I V ++P +ER+I
Sbjct: 41 SQPIETVYRILCPGKKIGSVLGRGGHIVKALREETKAKIRVADSIPGAEERVIIIFDYQD 100
Query: 234 ----------TVTASEGPESRYSP--AQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVN 279
++ ++G E+ AQ A++ + ++ E + + S V
Sbjct: 101 QSEQTDEAAQNISNNDGSENMKLQCFAQDALLKIHDKISTHEDPHDGAIHEKSETAADVT 160
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQ-LLKCISENDRVVQISGEFSKV 338
AR++V NQVGCLLGKGG+II ++R TG IRI+ Q L +C ++D +VQISG S V
Sbjct: 161 ARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDELVQISGAPSLV 220
Query: 339 KDAVYNVTGRL 349
+ A+Y ++ RL
Sbjct: 221 RKALYEISTRL 231
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 12/171 (7%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASEG 240
+ +E S RILC+++ +G VIGK G +R ++ + GA I V + ERLI +++ E
Sbjct: 295 EAEEFSVRILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSSKEI 354
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
P SPA +A++L+ S+ + +SEK + L+ RLVV S++VGC+LG+GG +I
Sbjct: 355 PGDPVSPAIEALILLHSK-VSASSEK-------RHLIT--RLVVPSSKVGCILGEGGKVI 404
Query: 301 SEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+EMR+ G IR+ S K +S ++ +VQ++G +DA+ + RLR
Sbjct: 405 TEMRRRIGAEIRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIASRLR 455
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 18/230 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER-LITVTASE 239
++ +++ +++CS+ K+G VIGKGG+ I+ ++ +G+ I V + D+ +ITVTA+E
Sbjct: 311 SKSEKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATE 370
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P+ S A +AV+L+ ++ + EK V +L+V S +GC++GK G+I
Sbjct: 371 SPDDLKSMAVEAVLLLQEKINDEDEEK-----------VKMQLLVPSKVIGCIIGKSGSI 419
Query: 300 ISEMRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS--- 355
ISE+RK T +I I + KC ND +V+ISGE S V+DA+ + RLRD+
Sbjct: 420 ISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDRE 479
Query: 356 -GTLNTARTRS-TSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLT 403
G+ N RS ++ + S + L P+SF S DF + P T
Sbjct: 480 IGSRNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPET 529
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 18/179 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V +RILC + +G+VIGK G +I ++ E A I V P C ER+IT+ S
Sbjct: 43 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVTEKKDI 102
Query: 239 ---EGPESRYS----PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGC 291
E E YS AQ A++ V ++ + + ++ + RL+V S+Q
Sbjct: 103 IDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIRECRLLVPSSQCSN 162
Query: 292 LLGKGGTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
++GK G+II ++R T ++++ +SD C + D +V ISGE VK A++ V+
Sbjct: 163 VIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKALFAVS 221
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE-------G 240
+R LC + K+G++IG+GG I + ++++ A I +G ++ CDER+IT+ +S
Sbjct: 42 YRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVD 101
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTI 299
E + PAQ A+ V +L + + S++GL V RL+V S+Q+GC++GKGG I
Sbjct: 102 AEDKVCPAQDALFRVHEKL--SIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHI 159
Query: 300 ISEMRKVTGTSIRIISDQ-LLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I +R TG IR++S++ L C D ++QISG+ + V+ A+ V+ RL DN
Sbjct: 160 IQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDN 213
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R+LC+ VG VIGKGG II+ ++ E+GAFI V ++ E D+ +ITV+A E E
Sbjct: 278 KEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A V + R E T + S RL+V+++++GCL+GKGG+II+E+
Sbjct: 337 PVSPTINAAVHLQPRCSEKTDPESAIPS------YTTRLLVSTSRIGCLIGKGGSIITEI 390
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R+ + +IRI+S + + K +E++ +VQISG+ V+ A+ +T RL+ N F
Sbjct: 391 RRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF 442
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 167 LSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GAT 224
LS++ D + ++ +V+ R+L +D++G +IGKGG II+ ++S+ GA I V
Sbjct: 120 LSIDDD-IGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNEN 178
Query: 225 MPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRL 259
+P C + L+ ++ + +KA++ V SRL
Sbjct: 179 LPACAISGDELLQISGDS------TVVRKALLQVSSRL 210
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE-------G 240
+R LC + K+G++IG+GG I + ++++ A I +G ++ CDER+IT+ +S
Sbjct: 42 YRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVD 101
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTI 299
E + PAQ A+ V +L + + S++GL V RL+V S+Q+GC++GKGG I
Sbjct: 102 AEDKVCPAQDALFRVHEKL--SIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHI 159
Query: 300 ISEMRKVTGTSIRIISDQ-LLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I +R TG IR++S++ L C D ++QISG+ + V+ A+ V+ RL DN
Sbjct: 160 IQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDN 213
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R+LC+ VG VIGKGG II+ ++ E+GAFI V ++ E D+ +ITV+A E E
Sbjct: 278 KEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A V + R E T + S RL+V+++++GCL+GKGG+II+E+
Sbjct: 337 PVSPTINAAVHLQPRCSEKTDPESAIPS------YTTRLLVSTSRIGCLIGKGGSIITEI 390
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R+ + +IRI+S + + K +E++ +VQISG+ V+ A+ +T RL+ N F
Sbjct: 391 RRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF 442
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 167 LSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GAT 224
LS++ D + ++ +V+ R+L +D++G +IGKGG II+ ++S+ GA I V
Sbjct: 120 LSIDDD-IGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNEN 178
Query: 225 MPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRL 259
+P C + L+ ++ + +KA++ V SRL
Sbjct: 179 LPACAISGDELLQISGDS------TVVRKALLQVSSRL 210
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 21/195 (10%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--- 235
+Q + +RILC + K+G VIGK G I+++L+ E A I+V T+P +ER+I +
Sbjct: 40 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 99
Query: 236 -------------TASEGPESRYSP---AQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLV 278
+A+E + P AQ A++ V R+IE G+ N+ +
Sbjct: 100 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 159
Query: 279 NARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSK 337
ARL+V +N VGCLLGK G +I +R TG +IR++ +D+L C D +VQISG+ +
Sbjct: 160 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 219
Query: 338 VKDAVYNVTGRLRDN 352
K A+Y V+ L N
Sbjct: 220 AKRALYEVSTLLHQN 234
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 10/130 (7%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E S +ILCS K+G VIGKGG ++ LQ E GA I V + DER+I +A EG
Sbjct: 316 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG---L 372
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
++P + + + +L TSE S KG + RL+V S++VGC+LG+GG +I+EMR
Sbjct: 373 WNPRSQTIDAIL-QLQNKTSE-----FSEKGTIT-TRLLVPSSKVGCILGQGGHVINEMR 425
Query: 305 KVTGTSIRII 314
+ T IR++
Sbjct: 426 RRTQADIRVV 435
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ R+LC D +G VIGKGG I++++ +GA + V T +CDE +IT+++ E +
Sbjct: 306 EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDD 365
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
S A + V+L+ ++ + ++G V RL++ S +GC++GK G+II+E+
Sbjct: 366 LKSMAVETVLLLQEKI-----------NDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEI 414
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
RK T IRI LKC S +D +V+++G+ V+DA+ + RLRD+
Sbjct: 415 RKSTRADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDAL 465
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R+ D + V +RILC ++ +G+VIGK G +I +++ E A I V P +R+
Sbjct: 23 RITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRV 82
Query: 233 IT----VTASEGPE--------SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
IT V E E AQ A++ V + + + G D +
Sbjct: 83 ITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAG-DLDRKQRDKEQC 141
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGEFS 336
++++ S+Q ++GK G+ I ++R T TSI+I +D + C + D I+GE
Sbjct: 142 QILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPE 201
Query: 337 KVKDAVYNVT 346
V+ A++ ++
Sbjct: 202 GVRRALFAIS 211
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 11/172 (6%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
++ +E+ R+LC +DK+G VIGKGG+ I++++ +GA I V + DE LI +T +E
Sbjct: 302 SRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTES 361
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
P S A +AV+L+ ++ + V+ RL+V S +GC++GK G+II
Sbjct: 362 PSDLKSMAVEAVLLMQGKI-----------NDEDDTTVSIRLLVPSKVIGCIIGKSGSII 410
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+E+RK T +RI KC ND +V++ G V+DA+ + RLRD+
Sbjct: 411 NEIRKRTKADVRISKGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDD 462
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R+ D R + + +RILC ++ +G+VIGK G +I +++ E A + V P +R+
Sbjct: 24 RMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRV 83
Query: 233 ITVTAS-------------EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
IT+ G E + AQ A++ V + + G D +
Sbjct: 84 ITIYCYVKEKEDVEIDDEFAGKEPLCA-AQDALLKVHVAIANSIAAIG-DSEKKRKDRDE 141
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII----SDQLLKCISENDRVVQISGEF 335
+++V S+Q ++GK G I ++R T +I++ +D C E D V I+GE
Sbjct: 142 CQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGES 201
Query: 336 SKVKDAVYNVT 346
VK A++ V+
Sbjct: 202 EAVKRALFAVS 212
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+++ +N VG +LGKGG I+ +RK++G SI I ++ + DR+ ISG
Sbjct: 559 MLIPANAVGKVLGKGGANIANIRKISGASIEISDNKSAR----GDRIALISG 606
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E+ R+LC D +G VIGKGG I++++ +GA + V T +CDE +IT+++ E +
Sbjct: 306 EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDD 365
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
S A + V+L+ ++ + ++G V RL++ S +GC++GK G+II+E+
Sbjct: 366 LKSMAVETVLLLQEKI-----------NDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEI 414
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
RK T IRI LKC S +D +V+++G+ V+DA+ + RLRD+
Sbjct: 415 RKSTRADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDAL 465
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R+ D + V +RILC ++ +G+VIGK G +I +++ E A I V P +R+
Sbjct: 23 RITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRV 82
Query: 233 IT----VTASEGPE--------SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
IT V E E AQ A++ V + + + G D +
Sbjct: 83 ITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAG-DLDRKQRDKEQC 141
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGEFS 336
++++ S+Q ++GK G+ I ++R T TSI+I +D + C + D I+GE
Sbjct: 142 QILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPE 201
Query: 337 KVKDAVYNVT 346
V+ A++ ++
Sbjct: 202 GVRRALFAIS 211
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
++ +E+ R+LC DK+G VIG+GG+ I++++ +GA + V T + DE LITVT++E
Sbjct: 114 SRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTES 173
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
+ S A +AV+L+ +++ + + V RL+V S +GC++GK G+II
Sbjct: 174 VDDLKSMAVEAVLLLQAKINDEDDDT-----------VAIRLLVPSKIIGCIIGKSGSII 222
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+E+RK T +RI + KC ND ++++ GE V+DA+ + RLRD+
Sbjct: 223 NEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDAL 276
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+V+ +N VG ++GKGG I+ +RK++G I I + S DRV ISG
Sbjct: 369 MVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKS----SRGDRVALISG 416
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
++ +E+ R+LC DK+G VIG+GG+ I++++ +GA + V T + DE LITVT++E
Sbjct: 302 SRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTES 361
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
+ S A +AV+L+ +++ + + V RL+V S +GC++GK G+II
Sbjct: 362 VDDLKSMAVEAVLLLQAKINDEDDDT-----------VAIRLLVPSKIIGCIIGKSGSII 410
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+E+RK T +RI + KC ND ++++ GE V+DA+ + RLRD+
Sbjct: 411 NEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDAL 464
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 169 LESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC 228
++ RV D + + + +RILC + +G+VIGK G +I +++ + A I V P
Sbjct: 20 IQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGA 79
Query: 229 DERLITVTASE------------GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFS-SNKG 275
+R+IT+ + PAQ A++ V + ++ + L+ S K
Sbjct: 80 KDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS--LENSDKKKK 137
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS----DQLLKCISENDRVVQI 331
+++V S+Q ++GK G I +R T +I+I + D C E D V I
Sbjct: 138 DKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLI 197
Query: 332 SGEFSKVKDAVYNVT 346
+G+ VK A++ ++
Sbjct: 198 AGDSEAVKKALFAIS 212
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+V+ +N VG ++GKGG I+ +RK++G I I + S DRV ISG
Sbjct: 557 MVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKS----SRGDRVALISG 604
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
++ +E+ R+LC DK+G VIG+GG+ I++++ +GA + V T + DE LITVT++E
Sbjct: 302 SRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTES 361
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
+ S A +AV+L+ +++ + + V RL+V S +GC++GK G+II
Sbjct: 362 VDDLKSMAVEAVLLLQAKINDEDDDT-----------VAIRLLVPSKIIGCIIGKSGSII 410
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+E+RK T +RI + KC ND ++++ GE V+DA+ + RLRD+
Sbjct: 411 NEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDAL 464
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 169 LESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC 228
++ RV D + + + +RILC + +G+VIGK G +I +++ + A I V P
Sbjct: 20 IQKRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGA 79
Query: 229 DERLITVTASE------------GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFS-SNKG 275
+R+IT+ + PAQ A++ V + ++ + L+ S K
Sbjct: 80 KDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS--LENSDKKKK 137
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS----DQLLKCISENDRVVQI 331
+++V S+Q ++GK G I +R T +I+I + D C E D V I
Sbjct: 138 DKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLI 197
Query: 332 SGEFSKVKDAVYNVT 346
+G+ VK A++ ++
Sbjct: 198 AGDSEAVKKALFAIS 212
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+V+ +N VG ++GKGG I+ +RK++G I I + S DRV ISG
Sbjct: 571 MVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKS----SRGDRVALISG 618
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 126/223 (56%), Gaps = 12/223 (5%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQ 249
+LC NDK+G VIGKGG+II ++ E GA I V +P+CDER+I V++ E + R SP
Sbjct: 1 MLCRNDKIGGVIGKGGSIINQIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTL 60
Query: 250 KAVV-LVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
+AV+ L F TSEK ++ K ++ R +V SN +GCLLGKGG+IISEMRK T
Sbjct: 61 EAVLHLQFK-----TSEKSIE--EGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTR 113
Query: 309 TSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTS 367
+IRI+S D + KC EN+ +VQ+ GE ++A+ + RLR N F + + S
Sbjct: 114 ANIRIMSKDNIPKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKD--QDGGSNAGS 171
Query: 368 SVLTETSPYSRLKDPASFGVHSSVA-VSHDFSQPPLTQDGNWS 409
V S Y R + FG + +S P L +G S
Sbjct: 172 VVPPSLSLYGRGVPDSGFGRGDELGSTGRMYSLPSLGLEGTAS 214
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 108/179 (60%), Gaps = 11/179 (6%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
+ T A E+ FR+LC + K+G VIG+GG I+ ++ E+GA I V + +E +I
Sbjct: 298 IPTYSAPKCSGELEFRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESII 357
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
T+T++E + S A +AV+L+ +++ D+ ++ +N RL+V + +GCL+
Sbjct: 358 TITSTEAIDDVKSAAVEAVLLLQAKI--------NDYEDDR---MNLRLLVPNKVIGCLI 406
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G+GG+I+++MRK T +I I + S +D +V++SGE K++DA+ + RLR++
Sbjct: 407 GRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLRED 465
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV---------T 236
V +RILC + +G+VIGK G +I A++ + A + V P D+R+I V
Sbjct: 41 VLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
A AQ A++ V + +++ D S+K A ++V ++Q ++GK
Sbjct: 101 AEVDDNEPVCAAQDALLRVHNAIVDTLHRNRRD--SDKKNTEEANILVPASQASNVIGKS 158
Query: 297 GTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
G +I +R + I++ SD C D VQI+G VK A++ V+
Sbjct: 159 GAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVS 212
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 10/167 (5%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V +R+LC ++G VIGKGG++I+ ++ GA I V + C ERLI++++S+ P +
Sbjct: 31 VEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDEPGAEL 90
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
AQ+A+ V SRL E ++ + R++V QVGC+LGKGG +IS++R+
Sbjct: 91 CRAQEALFAVQSRLSEAD-------AAQEDTCCVVRMLVEQAQVGCVLGKGGEVISDLRR 143
Query: 306 VTGTSIRIISDQ--LLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
TG +IR +SD+ L C D +V + GE V DA+ ++ LR
Sbjct: 144 RTGANIR-VSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLR 189
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 26/189 (13%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-----GA-TMPECD----ERLIT 234
EV R+L +G VIG+ G +IR ++ + GA I V GA P + +R+IT
Sbjct: 266 EVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKKGVDRVIT 325
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLV-----NARLVVASNQV 289
V A+E + SP ++AV L+ L+ GL +LV ++ QV
Sbjct: 326 VAAAEAAGAAVSPTEEAVCLMALCLL---GPSGLPPVPCIRILVPTPQGGTAEALSLLQV 382
Query: 290 GCLLGKGGTIISEMRKVTGTSIRII-----SDQLLK---CISENDRVVQISGEFSKVKDA 341
G +LGKGG I+++RK +G +R++ D+ L + +VVQI G + A
Sbjct: 383 GGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEGPITATVKA 442
Query: 342 VYNVTGRLR 350
V V +LR
Sbjct: 443 VRAVCAQLR 451
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 265 EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISE 324
E G+ S G +V RL+ + ++G ++GKGG++I +MR TG I+ + ++ C
Sbjct: 18 EAGVVKRSAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIK-VEPEVAGC--- 73
Query: 325 NDRVVQIS------GEFSKVKDAVYNVTGRL 349
++R++ +S E + ++A++ V RL
Sbjct: 74 SERLISLSSSDEPGAELCRAQEALFAVQSRL 104
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 129/230 (56%), Gaps = 18/230 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER-LITVTASE 239
++ ++++ +++CS+ K+G VIGKGG I+ ++ +G+ I V + D+ +ITVTA+E
Sbjct: 312 SRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATE 371
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P+ S A +AV+L+ ++ + +K V +L+V+S +GC++GK G+I
Sbjct: 372 SPDDLKSMAVEAVLLLQEKINDEDEDK-----------VKMQLLVSSKVIGCIIGKSGSI 420
Query: 300 ISEMRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF---- 354
ISE+RK T I I + KC ND +V+ISGE S V+DA+ + RLRD+
Sbjct: 421 ISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
Query: 355 SGTLNTARTRS-TSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLT 403
+G+ N RS ++ + +S + L P SF S DF++ P T
Sbjct: 481 TGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPET 530
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V +RILC + +G+VIGK G +I ++ E A I V P C ER+IT+ S
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 239 ---EGPESRYS----PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGC 291
E E YS AQ A++ V ++ + + ++ RL+V S+Q
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 292 LLGKGGTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
++GK G+II +R T ++++ +SD C + D +V ISGE VK A++ V+
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVS 222
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 129/230 (56%), Gaps = 18/230 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER-LITVTASE 239
++ ++++ +++CS+ K+G VIGKGG I+ ++ +G+ I V + D+ +ITVTA+E
Sbjct: 312 SRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATE 371
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P+ S A +AV+L+ ++ + +K V +L+V+S +GC++GK G+I
Sbjct: 372 SPDDLKSMAVEAVLLLQEKINDEDEDK-----------VKMQLLVSSKVIGCIIGKSGSI 420
Query: 300 ISEMRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF---- 354
ISE+RK T I I + KC ND +V+ISGE S V+DA+ + RLRD+
Sbjct: 421 ISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
Query: 355 SGTLNTARTRS-TSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLT 403
+G+ N RS ++ + +S + L P SF S DF++ P T
Sbjct: 481 TGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPET 530
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V +RILC + +G+VIGK G +I ++ E A I V P C ER+IT+ S
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 239 ---EGPESRYS----PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGC 291
E E YS AQ A++ V ++ + + ++ RL+V S+Q
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 292 LLGKGGTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
++GK G+II +R T ++++ +SD C + D +V ISGE VK A++ V+
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVS 222
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 102/168 (60%), Gaps = 11/168 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E+ R+LC K+G VIGKGG I++++ E+GA I V + + +E +IT+T++E +
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
S A +AV+L+ S++ + N+G + N RL+V +GCL+GKGG+I+++MR
Sbjct: 181 KSAAVEAVLLLQSKIND----------DNEGKM-NLRLLVPGKVIGCLIGKGGSIVNDMR 229
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
T +I I + + S +D +V++ GE ++DA+ + RLRD+
Sbjct: 230 SKTKAAIYISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDD 277
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 104/178 (58%), Gaps = 11/178 (6%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
+ T A E+ FR+LC K+G VIG+GG I+ ++ E+GA I V + +E +I
Sbjct: 301 IPTYSAPKCSGELEFRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESII 360
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
T+ ++E + S A +AV+L+ +++ + ++ +N RL+V + +GCL+
Sbjct: 361 TIISTESTDDVKSAAVEAVLLLQAKINDSEDDR-----------MNLRLLVPNKVIGCLI 409
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
G+GG+I+++MRK T +I I + S +D +V++SGE K++DA+ + RLR+
Sbjct: 410 GRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLRE 467
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA-------- 237
V +RILC + +G+VIGK G +I A++ + A + V P D+R+I V
Sbjct: 41 VLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 238 SEGPESR-YSPAQKAVVLVFSRLIEGTSEKGLDF-SSNKGLLVNARLVVASNQVGCLLGK 295
+EG ++ AQ A++ V + +++ + S+K A ++V ++Q ++GK
Sbjct: 101 AEGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVIGK 160
Query: 296 GGTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
G +I +R + I++ SD C D VQI+G VK A++ V+
Sbjct: 161 SGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVS 215
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 112/199 (56%), Gaps = 14/199 (7%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
R++C DK+G VIGKGG I++++ E+GA I V + +E +ITVT++E + S
Sbjct: 315 LRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATDDVKSA 374
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A +AV+L+ +++ +G ++ ++ RL+V N +GCL+GKGG+I+++MR +
Sbjct: 375 AVEAVLLLQAKINDGIEDR-----------MHIRLLVPGNVIGCLIGKGGSIVNDMRNKS 423
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTL---NTARTR 364
I I + S +D +V++ GE K++DA+ + RLR++ ++ N+ +
Sbjct: 424 KAIIHISKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSVERQNSDKDG 483
Query: 365 STSSVLTETSPYSRLKDPA 383
+ +TE S PA
Sbjct: 484 KRTIAITEPMYSSNFSMPA 502
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 25/193 (12%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V T + + + V +RILC + +G+VIGK G +I +++ + A + V P D+R+I
Sbjct: 27 VHTQENSSNDELVVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVI 86
Query: 234 TV---------------TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLV 278
V + AQ A++ V ++E + ++ S+
Sbjct: 87 LVYCHVHHRDLTHRDIDVDDDDDREPVCAAQNALLKVHDAIVEALA---INSDSDDE--- 140
Query: 279 NARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI----ISDQLLKCISENDRVVQISGE 334
A ++V ++Q ++GK G++I +R ++ +SI++ S+ C D VQI+G+
Sbjct: 141 EANILVPASQAASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGD 200
Query: 335 FSKVKDAVYNVTG 347
VK A++ V+
Sbjct: 201 ARAVKKALFAVSA 213
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 18/183 (9%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------- 235
E +RILC K+G+V+G+GG I++AL+ A I V ++P DER+I +
Sbjct: 45 ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEE 104
Query: 236 ----TASEGPESR--YSPAQKAVVLVFSRLIEGTS-EKGLDFSSNKGLL-VNARLVVASN 287
+++G E + AQ A++ + ++ G+ ++ + V AR++V N
Sbjct: 105 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGN 164
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
QVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y ++
Sbjct: 165 QVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEIS 224
Query: 347 GRL 349
RL
Sbjct: 225 TRL 227
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 38/248 (15%)
Query: 131 SQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRI 190
+ +LP LHVD +P + RPL S + +E S +I
Sbjct: 259 ANPMLPHLHVD----------HSPQIPLLDPYRNRPLQYHS---------AEAEEFSIKI 299
Query: 191 LCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC-DERLITVTASEGPESRYSPAQ 249
LC+++ +G VIGK G +R ++ + GA + V +ERLI V++ E P+ SP
Sbjct: 300 LCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTI 359
Query: 250 KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
+A++L+ S++ + N L RLVV SN+VGC++G+GG +I+EMR+ TG
Sbjct: 360 EALILLHSKVST--------LAENHHL--TTRLVVPSNKVGCIIGEGGKVITEMRRRTGA 409
Query: 310 SIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSS 368
IR+ S K +S ++ +VQ++G + + A+ + RLR T R S+S+
Sbjct: 410 EIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLR-------TRTLRDGSSSN 462
Query: 369 VLTETSPY 376
T +P+
Sbjct: 463 NPTPFAPF 470
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 18/183 (9%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------- 235
E +RILC K+G+V+G+GG I++AL+ A I V ++P DER+I +
Sbjct: 52 ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEE 111
Query: 236 ----TASEGPESR--YSPAQKAVVLVFSRLIEGTS-EKGLDFSSNKGLL-VNARLVVASN 287
+++G E + AQ A++ + ++ G+ ++ + V AR++V N
Sbjct: 112 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGN 171
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
QVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y ++
Sbjct: 172 QVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEIS 231
Query: 347 GRL 349
RL
Sbjct: 232 TRL 234
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 124/245 (50%), Gaps = 38/245 (15%)
Query: 134 ILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCS 193
+LP LHVD +P + RPL S + +E S +ILC+
Sbjct: 269 MLPHLHVD----------HSPQIPLLDPYRNRPLQYHS---------AEAEEFSIKILCA 309
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC-DERLITVTASEGPESRYSPAQKAV 252
++ +G VIGK G +R ++ + GA + V +ERLI V++ E P+ SP +A+
Sbjct: 310 SEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEAL 369
Query: 253 VLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIR 312
+L+ S++ + N L RLVV SN+VGC++G+GG +I+EMR+ TG IR
Sbjct: 370 ILLHSKVST--------LAENHHLTT--RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIR 419
Query: 313 IISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLT 371
+ S K +S ++ +VQ++G + + A+ + RLR T R S+S+ T
Sbjct: 420 VYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLR-------TRTLRDGSSSNNPT 472
Query: 372 ETSPY 376
+P+
Sbjct: 473 PFAPF 477
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 18/183 (9%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--------- 235
E +RILC K+G+V+G+GG I++AL+ A I V ++P DER+I +
Sbjct: 45 ETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEE 104
Query: 236 ----TASEGPESR--YSPAQKAVVLVFSRLIEGTS-EKGLDFSSNKGLL-VNARLVVASN 287
+++G E + AQ A++ + ++ G+ ++ + V AR++V N
Sbjct: 105 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGN 164
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
QVGCLLGKGG+II ++R TG IR++ S+ L +C ++D +VQISG S V+ A+Y ++
Sbjct: 165 QVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEIS 224
Query: 347 GRL 349
RL
Sbjct: 225 TRL 227
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 124/245 (50%), Gaps = 38/245 (15%)
Query: 134 ILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCS 193
+LP LHVD +P + RPL S + +E S +ILC+
Sbjct: 262 MLPHLHVD----------HSPQIPLLDPYRNRPLQYHS---------AEAEEFSIKILCA 302
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC-DERLITVTASEGPESRYSPAQKAV 252
++ +G VIGK G +R ++ + GA + V +ERLI V++ E P+ SP +A+
Sbjct: 303 SEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEAL 362
Query: 253 VLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIR 312
+L+ S++ + N L RLVV SN+VGC++G+GG +I+EMR+ TG IR
Sbjct: 363 ILLHSKVST--------LAENHHLTT--RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIR 412
Query: 313 IISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLT 371
+ S K +S ++ +VQ++G + + A+ + RLR T R S+S+ T
Sbjct: 413 VYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLR-------TRTLRDGSSSNNPT 465
Query: 372 ETSPY 376
+P+
Sbjct: 466 PFAPF 470
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 104/189 (55%), Gaps = 22/189 (11%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
++ +R LC K+G++IG+GG I + L+SE + I +G TMP C+ER++T+ +S +
Sbjct: 41 EDTVYRYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETN 100
Query: 244 RY-------SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ SPAQ A+ V R++ G E D + V R++V S+Q+GC++GKG
Sbjct: 101 PFGDTGELVSPAQDALFRVHDRIVAG--ELPADEEPEEAQQVTVRMLVPSDQIGCVIGKG 158
Query: 297 GTIISEMRKVTGTSIRIISDQLL-KCISENDRVV------------QISGEFSKVKDAVY 343
G +I +R T IRI+ D+ L C +D ++ QI G+ S V+ A++
Sbjct: 159 GQVIQNIRSETRAQIRILKDEHLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALH 218
Query: 344 NVTGRLRDN 352
+ RL +N
Sbjct: 219 QLASRLHEN 227
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II+ ++ E+GA I V ++ E D+ +I ++A E E
Sbjct: 293 KEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED 352
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A + RL SEK SS+ +V RL+V S+++GCL+GKGG IISEM
Sbjct: 353 P-SPTIDAAL----RLQPRCSEKAERESSDS--VVTTRLLVPSSRIGCLIGKGGAIISEM 405
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
R VT +IRI+S + L K SE+D +VQI+GE + +A+ VT RL+ N F A
Sbjct: 406 RSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFEREGAIAA 465
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSS 390
T L P S + D + +G S
Sbjct: 466 IPPTLPYL----PMSDMSDGSKYGSRDS 489
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+ Q+V+ R+L +D++G VIGKGG +I+ ++SE A I + +P C
Sbjct: 136 EAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLPPC 184
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
+Q +E+ R+LC ++K+G VIG+GG+ I++++ +G I V + DE LI +T +E
Sbjct: 115 SQSEELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTES 174
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
P S A +AV+L+ ++ S V+ +L+V S +GC++GK G+II
Sbjct: 175 PSDLKSMAVEAVLLIQGKI-----------SDEDDTEVSIQLLVPSKVIGCIIGKSGSII 223
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+E+RK T IRI KC ND +V++ G V+DA+ + RLRD+
Sbjct: 224 NEIRKRTRADIRISKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDD 275
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 14/168 (8%)
Query: 172 DRVATLDARTQ--------QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
DR DA+ Q Q E +R+L + KVG+VIGK GTI++A++ E GA I V
Sbjct: 81 DRDGPPDAKRQAIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVE 140
Query: 224 TMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV 283
+P CDER+I ++A AQ+A+ V +R+ E E+G R++
Sbjct: 141 GVPNCDERVIVISARSDAARHTDAAQEALFKVHARVHE--HEEGPHPPPAN---ATTRML 195
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQ 330
V Q GCL+GK G II E+R+ +G I+I+ ++ L C NDRVVQ
Sbjct: 196 VCHTQAGCLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSNDRVVQ 243
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 101/173 (58%), Gaps = 4/173 (2%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASEG 240
+ +E S RILC+++ +G VIG+ G +R ++ + GA I V + ERLI +++ E
Sbjct: 63 EPEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEI 122
Query: 241 PESRYSPAQKAVVLVFSRL-IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P SP +A++L+ S++ SE S + LV RLVV S +VGC+LG+GG +
Sbjct: 123 PADPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVT-RLVVPSKKVGCILGEGGKV 181
Query: 300 ISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
I+EMR+ G IR+ S K +S N+ +VQ+SG ++A+ + RLRD
Sbjct: 182 ITEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRD 234
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 127/230 (55%), Gaps = 18/230 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER-LITVTASE 239
++ ++++ +++C++ K+G VIGKGG I+ ++ +G+ I V + D+ +ITVTA+E
Sbjct: 312 SRSEKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATE 371
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P+ S A +AV+L+ ++ + +K V +L+V+S +GC++GK G+I
Sbjct: 372 SPDDLKSMAVEAVLLLQEKINDEDEDK-----------VKMQLLVSSKVIGCIIGKSGSI 420
Query: 300 ISEMRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF---- 354
ISE+RK T I I + K ND +V+ISGE S V+DA+ + RLRD+
Sbjct: 421 ISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
Query: 355 SGTLNTARTRS-TSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLT 403
+G+ N RS ++ + +S + L P SF S DF + P T
Sbjct: 481 TGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFDRRPET 530
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V +RILC + +G+VIGK G +I ++ E A I V P C ER+IT+ S
Sbjct: 44 VVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDI 103
Query: 239 ---EGPESRYS----PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGC 291
E E YS AQ A++ V ++ + + ++ RL+V S+Q
Sbjct: 104 VDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRECRLLVPSSQCSI 163
Query: 292 LLGKGGTIISEMRKVTGTSIRII----SDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
++GK G+II +R T +++++ SD C + D +V ISGE VK A++ V+
Sbjct: 164 VIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGETESVKKALFAVS 222
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 103/179 (57%), Gaps = 12/179 (6%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V++L A +Q +E+ R+LC +DK+G +IGKGG I+ ++ +GA I V + DE LI
Sbjct: 301 VSSLGA-SQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLI 359
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
T+TA+E S A +AV+L+ ++ + V+ RL+V S +GC++
Sbjct: 360 TITATESTSDLKSVAVEAVLLLQEKI-----------NDEDDAPVSIRLLVPSKVIGCII 408
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G+ G II+E+RK T I+I K +ND +V++ GE V+DA+ + RLR++
Sbjct: 409 GRSGAIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLRED 467
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 18/190 (9%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
RV D R + + +++RILC N+ +G+VIGK G +I +++ E+ A + V P R+
Sbjct: 29 RVNDRDERDKGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRV 88
Query: 233 ITV------------TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
IT+ E AQ A++ V S I + E D +
Sbjct: 89 ITIFCHVKNKEEIEIEDEFDNEKPLCAAQDALIKVHS-AISNSIETAGDSEKKRKNKDEC 147
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII----SDQLLKCISENDRVVQISGEFS 336
+++V S+Q L+GK G I ++R T T+I+++ +D C E D V + GE
Sbjct: 148 QILVPSSQSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLV-GESE 206
Query: 337 KVKDAVYNVT 346
VK A++ V+
Sbjct: 207 AVKRALFAVS 216
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+VV +N VG ++GKGG ++ +RK++G ++ I + + DRV ISG
Sbjct: 565 MVVPANAVGKVMGKGGANLANIRKISGATVEISESKSYR----GDRVALISG 612
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 103/172 (59%), Gaps = 12/172 (6%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASE 239
T+ +E S RILC+++ +G+VIGK G +R ++ + GA I V + ERLI ++++E
Sbjct: 28 TETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNE 87
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P SPA +A++L+ + + SEK + RLVV S++VGC++G+GG +
Sbjct: 88 IPAEPISPAIEALILLHDK-VSAPSEKHHS---------STRLVVPSSKVGCIIGEGGKV 137
Query: 300 ISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
I++MR+ TG IR+ S K +S +D +VQ++G + + A+ + RLR
Sbjct: 138 ITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 189
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V T + E+ R++C DK+G VIGK G I+ ++ E+GA + V + +E +I
Sbjct: 300 VPTYNTPKCSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESII 359
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
TV+++E + S A +AV+L+ +++ + T ++ ++ RL+V N +GCL+
Sbjct: 360 TVSSTEATDDVKSAAVEAVLLLQAKINDETEDR-----------MHLRLLVPGNVIGCLI 408
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GKGG+II++MR + I I + S +D +V++ GE K++DA+ + RLR++
Sbjct: 409 GKGGSIINDMRNKSKAIIHISKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLREDV 468
Query: 354 FS---GTLNTARTRSTSSVLTETSPYSRLKDPA 383
G N+ + + TE S PA
Sbjct: 469 LKDSVGRQNSGKDGKLTVATTEPVSSSSFPMPA 501
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV---------- 235
V +RILC + +G+VIGKGG +I +++ + A + V P D+R+I V
Sbjct: 38 VVYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVM 97
Query: 236 -----TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
+ AQ A++ V ++ + D S +K A ++V ++Q
Sbjct: 98 LSDINADDDDDREPVCAAQNALLKVHDAIVGALAVT--DDSDDK----EANILVPASQAA 151
Query: 291 CLLGKGGTIISEMRKVTGTSIRII----SDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
++GK G++I ++R V+ + I++ SD C D VQI+G+ VK A++ V+
Sbjct: 152 SVIGKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVS 211
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 38/247 (15%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE--- 239
++ +R LC K+G++IGKGG I + L++++ + I + MP DER++T+ +S
Sbjct: 39 NEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEET 98
Query: 240 ---GPESRY-SPAQKAVVLVFSRLI----EGTSEKGLDFSSNKGLL--VNARLVVASNQV 289
G Y PAQ A+ +V R+I + + + N G + V R++V ++Q+
Sbjct: 99 NLFGETGEYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQI 158
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN-DRVVQISGEFSKVKDAVYNVTGR 348
GC++GKGG +I +R T IRI D L ++ + D ++ I GE S V+ A+Y V R
Sbjct: 159 GCVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATR 218
Query: 349 LRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGN- 407
L +N +RS +L+ +S VH V V+ + P L GN
Sbjct: 219 LHENP---------SRSQHLILS-----------SSANVHGGVFVTANAGAPVLGLYGNY 258
Query: 408 ---WSSS 411
WSSS
Sbjct: 259 KGGWSSS 265
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 18/182 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II+ ++ E+ A I V ++ E D+ +I ++A E E
Sbjct: 277 KEFSLRLVCPTANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISAKEFFED 336
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ SP A + + R + T ++ D ++ RL+V +Q+GCL+GKGG IISEM
Sbjct: 337 Q-SPTMNAALRLQPRCSDKTEKESGDS------VITTRLLVGRSQIGCLMGKGGAIISEM 389
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRV----------VQISGEFSKVKDAVYNVTGRLRDN 352
R T +IRIIS D L K E+D + VQI+G +A+ V RL+ N
Sbjct: 390 RNQTRANIRIISEDNLPKVAVEDDEMVQVNVYNFNSVQITGSLEVASNALLQVILRLKAN 449
Query: 353 HF 354
F
Sbjct: 450 LF 451
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 17/184 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS----- 238
++ +R LC K G++IG+GG I + ++SE A + + +P CDER++T+ ++
Sbjct: 16 EDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETN 75
Query: 239 --EGPESRYSPAQKAVVLVFSRLI------EGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
E E PA A+ V ++ +G + G ++S + V R++V S+Q+G
Sbjct: 76 RIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQ--TVTVRMLVPSDQIG 133
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKC--ISENDRVVQISGEFSKVKDAVYNVTGR 348
CL+GKGG +I ++R T IR+I+D L C +D ++QI G+ S V++A+Y V
Sbjct: 134 CLIGKGGQVIQKLRNDTNAQIRVINDNLPICALALSHDELLQIIGDPSAVREALYQVAFL 193
Query: 349 LRDN 352
L DN
Sbjct: 194 LYDN 197
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 97/181 (53%), Gaps = 17/181 (9%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER---LIT 234
DAR S +C + VG VIGKGG I + E+GA I V PE DE +I
Sbjct: 240 DARV----FSICFICPAENVGGVIGKGGCFINQTRQESGATIKV--HTPETDEDDDCIIF 293
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
++A E E + SP A + + +R E + D + ++ R+++ S+QVGCL+G
Sbjct: 294 ISAKEFFEDQ-SPTVNAALRLQTRCSEKVGKDSSDSA------ISTRVLIPSSQVGCLIG 346
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
KGG +ISEMR VT +IRI + + I+ EN+ +VQI+G A+ V RLR N
Sbjct: 347 KGGALISEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRANV 406
Query: 354 F 354
F
Sbjct: 407 F 407
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPEC------DERL- 232
+++Q V+ R+L +D++G +IGKGG +I+ L+++ A I V +P C DE L
Sbjct: 116 SERQTVTVRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVINDNLPICALALSHDELLQ 175
Query: 233 ITVTASEGPESRYSPA-----------------------QKAVVLVFSRLIEGTSEKGLD 269
I S E+ Y A Q +L+ +
Sbjct: 176 IIGDPSAVREALYQVAFLLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITSSHKNYSAP 235
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+ + + + + VG ++GKGG I++ R+ +G +I++ + + + ++D ++
Sbjct: 236 RDAADARVFSICFICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDE---DDDCII 292
Query: 330 QISG-EFSKVKDAVYNVTGRLR 350
IS EF + + N RL+
Sbjct: 293 FISAKEFFEDQSPTVNAALRLQ 314
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
++ FRILC +DKV +++G ++ LQ + G I + ++ DER+I +T+ EGP+
Sbjct: 338 DIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHE 397
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PAQ+A++ + + ++ D +K ++ RL+V S+++ C G+ G+ +S+++
Sbjct: 398 LFPAQEALLHLQTHIV--------DLGPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQ 448
Query: 305 KVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+ T +++I+ Q L C E+D ++QI GE +DA+ +T +LR +
Sbjct: 449 RQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFY 499
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 26/200 (13%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVT-----ASEGP 241
SFRILC KV G + I ++ + A +++ P R+I + ++G
Sbjct: 86 SFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGR 142
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCL 292
+SPAQ+A+++V R++E + G D G V RL+V VGCL
Sbjct: 143 PPSFSPAQEALLMVHRRILETEPDDG-DEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCL 201
Query: 293 LGKGGTIISEMRKVTGTSIRIIS-DQ-LLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
LGKGG II +MR T T IRI+ DQ +C+S ++ VVQ+ GE + VK AV ++ RL+
Sbjct: 202 LGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLK 261
Query: 351 DN------HFSGTLNTARTR 364
++ F G +N+ R
Sbjct: 262 ESLHRDRGPFRGRMNSPEHR 281
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
++ FRILC +DKV +++G ++ LQ + G I + ++ DER+I +T+ EGP+
Sbjct: 338 DIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHE 397
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PAQ+A++ + + ++ D +K ++ RL+V S+++ C G+ G+ +S+++
Sbjct: 398 LFPAQEALLHLQTHIV--------DLGPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQ 448
Query: 305 KVTGTSIRIISDQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+ T +++I+ Q L C E+D ++QI GE +DA+ +T +LR +
Sbjct: 449 RQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFY 499
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 26/200 (13%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVT-----ASEGP 241
SFRILC KV G + I ++ + A +++ P R+I + ++G
Sbjct: 86 SFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGR 142
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCL 292
+SPAQ+A+++V R++E + G D G V RL+V VGCL
Sbjct: 143 PPSFSPAQEALLMVHRRILETEPDDG-DEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCL 201
Query: 293 LGKGGTIISEMRKVTGTSIRIIS-DQ-LLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
LGKGG II +MR T T IRI+ DQ +C+S ++ VVQ+ GE + VK AV ++ RL+
Sbjct: 202 LGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLK 261
Query: 351 DN------HFSGTLNTARTR 364
++ F G +N+ R
Sbjct: 262 ESLHRDRGPFRGRMNSPEHR 281
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 7/150 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q++SFR+LC + G +IGK G II+ ++E GA I VG C ER+IT++A E P
Sbjct: 279 QQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITISALESP-G 337
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
++S Q A++ +F R+ E E+ L F + +AR++V +Q L+G GG II EM
Sbjct: 338 KHSKVQSAILCIFDRMEE--VERNLMFGKPE---CSARVLVPKSQFSSLVGLGGAIIKEM 392
Query: 304 RKVTGTSIRIISDQ-LLKCISENDRVVQIS 332
K TG I I+ + + C S +RV+Q S
Sbjct: 393 VKSTGARIEILDEMDVPACASNCERVLQAS 422
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 127/317 (40%), Gaps = 38/317 (11%)
Query: 90 SLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRNSV 149
+LE P++ R V P S R EA S + L + +QE L + VD+ + V
Sbjct: 76 ALEGYPEDAASRVAVVLGPTSPTRPVEASSSSSGEPLQLSPAQEALVSV-VDVGGVLHRV 134
Query: 150 LTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRI----------LCSNDKVGA 199
+ AP +S + V LE+ TL+A + R+ + S +V
Sbjct: 135 VARAP-EFVSCLVLVEAAGLEALGRGTLEAIASETNAELRVTSLAEGATPSVHSPKEVIE 193
Query: 200 VIGKGGTIIRA-------LQSEAGAF-ISVGATMPECDERLITVTASEGPESRYSPAQKA 251
+ G TI +A LQ + A ++ T P + +SE PE Y
Sbjct: 194 ITGDRTTIRKAIVALSSYLQGDLHACSLTTSVTTP---SPMFPWKSSEVPEPNYGDLHSG 250
Query: 252 VVLVFSRL----IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
V + + I+ + + + ++ RL+ N G L+GK G II T
Sbjct: 251 VSTKCANINVPWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETET 310
Query: 308 GTSIRIISDQLLKCISENDRVVQIS-----GEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
G SI + + C+ +RV+ IS G+ SKV+ A+ + R+ + L +
Sbjct: 311 GASID-VGNPFSGCM---ERVITISALESPGKHSKVQSAILCIFDRMEE--VERNLMFGK 364
Query: 363 TRSTSSVLTETSPYSRL 379
++ VL S +S L
Sbjct: 365 PECSARVLVPKSQFSSL 381
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 106/167 (63%), Gaps = 11/167 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E S +ILCS K+G VIGKGG+ ++ +Q + GA I V E DER+I V+AS E+
Sbjct: 312 EFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIRVSAS---EAL 368
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
++P + + + +L TS DFS KG + RL+V S++VGC+LG+GG +I+EMR
Sbjct: 369 WNPRSQTIDAIL-QLQNKTS----DFSE-KG-TITTRLLVPSSKVGCILGQGGQVINEMR 421
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ T IR+ S D+ KC SE++ +VQISG+F KDA+ + RLR
Sbjct: 422 RRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAKDALAEIASRLR 468
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 98/186 (52%), Gaps = 21/186 (11%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR--- 244
+RILC + K+G VIGKGG II+ L+ E A I+V +P DER+I + +S SR
Sbjct: 47 YRILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHN 106
Query: 245 ----------------YSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASN 287
Y AQ A++ V R++E G+ N+ V ARL+V +N
Sbjct: 107 DHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNN 166
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
VGCLLGK G +I +R TG +IR++ +D L C D +VQIS + K A+Y V+
Sbjct: 167 MVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVS 226
Query: 347 GRLRDN 352
L N
Sbjct: 227 TLLHQN 232
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 20/185 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-----TVTAS 238
Q SFRILC K G + I Q ++GA I++ P R+I T+ +
Sbjct: 107 QTTSFRILCPESKA---YGFPASFINNAQDDSGAIITIHPPFPGDPVRVIETADGTLREA 163
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL---------LVNARLVVASNQV 289
+G +SPAQ+A+++V R++E + G D G V RL+V V
Sbjct: 164 DGRPPMFSPAQEALLMVHRRILETQPDDG-DEDGEYGPRGKDARDRGKVTTRLIVPRQHV 222
Query: 290 GCLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTG 347
GCLLGKGG II +MR T T IRI+ + +C+S +++VVQ+ GE + VK AV ++
Sbjct: 223 GCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAIISD 282
Query: 348 RLRDN 352
RL+++
Sbjct: 283 RLKES 287
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 98/167 (58%), Gaps = 10/167 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E+ FRILC NDK +++G II LQ+E G + + + DER + +T+ EGP+
Sbjct: 362 EIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSREGPDHE 421
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PAQ+A++ + + ++ D +K ++ RL+V S+++ C G+ G+ +S+++
Sbjct: 422 LFPAQEALLHIQTFIV--------DLGPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQ 472
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ T +++I+ ++L C E+D ++QI GE ++A+ VT +LR
Sbjct: 473 RQTSANVQILPREELPSCALESDELIQIVGEIRAARNALMQVTTKLR 519
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 20/178 (11%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS- 246
+RILC ++ +G+VIGKGG +I++++ E + I V +P DER+I + +S P S+
Sbjct: 44 YRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSS--PLSKDKE 101
Query: 247 --------------PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
PAQ ++ V S +++ +S G D ++K +ARL+VA++Q+G L
Sbjct: 102 KDDDDDDNENEPVCPAQDGLLRVHSVIVQESS--GKDNDADKKRPQDARLLVANSQIGSL 159
Query: 293 LGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+GKGG I ++R +G I+I D+L C D +V ISG+ + VK A+Y V+ L
Sbjct: 160 IGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFL 217
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 78/125 (62%), Gaps = 9/125 (7%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
+ +E S R+LC NDK+G VIGKGG I++++++ GA I V E DER+I V+A+E
Sbjct: 310 KKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATE 369
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
+ R SP +AV+L+ + GT++K S+ R +V S +GCLLGKGG I
Sbjct: 370 LADDRVSPTIEAVLLLQGK-TSGTTDKDGAIST--------RFLVPSKHIGCLLGKGGNI 420
Query: 300 ISEMR 304
ISEMR
Sbjct: 421 ISEMR 425
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 98/167 (58%), Gaps = 10/167 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
++ FRILC NDKV ++ I+ LQ++ G + + + DER++ +T+ EGP+
Sbjct: 341 DIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHE 400
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PAQ+AV+ + + ++ D +K ++ RL+V S+++ C G+ G+ +S+++
Sbjct: 401 LFPAQEAVLHIQTHIV--------DLGPDKDNIITTRLLVPSSEIACFDGREGS-LSDIQ 451
Query: 305 KVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ T +++I+ + L C E+D ++QI GE S ++A+ VT +LR
Sbjct: 452 RQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLR 498
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 28/200 (14%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-TVTAS----EGPE 242
FRILC K G + ++ ++GA ++V R+I TV + +G
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 243 SRYSPAQKAVVLVFSRLIE----------GTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
+SPAQ+A+++V R++E +G D S ++G RL+V VGCL
Sbjct: 148 PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKD-SRDRGK-TTTRLIVPKMHVGCL 205
Query: 293 LGKGGTIISEMRKVTGTSIRIIS-DQ-LLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
LGKGG II +MR T T IRI+ DQ +C+S ++ VVQ+ G+ + VK AV +T RL+
Sbjct: 206 LGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLK 265
Query: 351 D------NHFSGTLNTARTR 364
+ F G +N+ R
Sbjct: 266 ESLHRDRGPFRGRMNSPEPR 285
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 106/190 (55%), Gaps = 20/190 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
++ +R LC K+G++IG+GG I + L+SE+ + I + M +ER++T+ ++
Sbjct: 47 NEDTVYRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEES 106
Query: 243 SRYS-------PAQKAVVLVFSRLI------------EGTSEKGLDFSSNKGLLVNARLV 283
+ + PAQ A+ +V R+I E E+ +F +K +V R++
Sbjct: 107 NLFGDSGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRML 166
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAV 342
V ++Q+GC++GKGG +I +R TG IRI+ D+ L ++ +D ++ I GE + V+ A+
Sbjct: 167 VPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKAL 226
Query: 343 YNVTGRLRDN 352
Y V RL +N
Sbjct: 227 YQVATRLHEN 236
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R++C +G VIGKGG II+ ++ E+ A I V ++ E D+ +I ++A E
Sbjct: 295 KEFSLRLVCPIGNIGGVIGKGGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAKE---- 350
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ Q A + RL SEK S + ++ RL+V +Q+GCL+GKGG IISEM
Sbjct: 351 -FFEDQSATLTAALRLQPRCSEKTERDSGDS--VITTRLLVPRSQIGCLMGKGGAIISEM 407
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R VT SIRI++ D L K SE+D +VQI+G +A+ +V RL+ N F
Sbjct: 408 RNVTRASIRILAEDNLPKVASEDDEMVQITGSHDVASNALLHVVLRLKANLF 459
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 31/41 (75%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+++Q V+ R+L D++G VIGKGG +I++++SE GA I +
Sbjct: 156 SKEQVVTVRMLVPADQIGCVIGKGGQVIQSIRSETGAQIRI 196
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 98/167 (58%), Gaps = 10/167 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
++ FRILC NDKV ++ I+ LQ++ G + + + DER++ +T+ EGP+
Sbjct: 341 DIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHE 400
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PAQ+AV+ + + ++ D +K ++ RL+V S+++ C G+ G+ +S+++
Sbjct: 401 LFPAQEAVLHIQTHIV--------DLGPDKDNIITTRLLVPSSEIACFDGREGS-LSDIQ 451
Query: 305 KVTGTSIRIISDQLLK-CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ T +++I+ + L C E+D ++QI GE S ++A+ VT +LR
Sbjct: 452 RQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLR 498
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 28/200 (14%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-TVTAS----EGPE 242
FRILC K G + ++ ++GA ++V R+I TV + +G
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 243 SRYSPAQKAVVLVFSRLIE----------GTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
+SPAQ+A+++V R++E +G D S ++G RL+V VGCL
Sbjct: 148 PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKD-SRDRGK-TTTRLIVPKMHVGCL 205
Query: 293 LGKGGTIISEMRKVTGTSIRIIS-DQLL-KCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
LGKGG II +MR T T IRI+ DQ +C+S ++ VVQ+ G+ + VK AV +T RL+
Sbjct: 206 LGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRLK 265
Query: 351 D------NHFSGTLNTARTR 364
+ F G +N+ R
Sbjct: 266 ESLHRDRGPFRGRMNSPEPR 285
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 97/168 (57%), Gaps = 21/168 (12%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E+ R+LC K+G VIGKGG I++++ E+GA I V + + +E +IT+T++E +
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
S A +AV+L+ S++ + N+G + +GCL+GKGG+I+++MR
Sbjct: 181 KSAAVEAVLLLQSKIND----------DNEGKV-----------IGCLIGKGGSIVNDMR 219
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
T +I I + + S +D +V++ GE ++DA+ + RLRD+
Sbjct: 220 SKTKAAIYISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDD 267
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 36/189 (19%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA- 237
A + +V FRILC K G VIGKGG IIR + + GA I + ++ CDER+I + A
Sbjct: 93 AGAAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVAD 152
Query: 238 ----------------SEGPES----------------RYSPAQKAVVLVFSRL--IEGT 263
++G ES SPAQ+A+V VF R+ ++
Sbjct: 153 AVKSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEE 212
Query: 264 SEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCI 322
E+ + V RL+ SNQVGC+LG+GG I+ ++R+ +G IR++ D + C
Sbjct: 213 REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACA 272
Query: 323 SENDRVVQI 331
S D ++Q+
Sbjct: 273 SPGDELIQV 281
>gi|357501551|ref|XP_003621064.1| Pectin acetylesterase [Medicago truncatula]
gi|355496079|gb|AES77282.1| Pectin acetylesterase [Medicago truncatula]
Length = 1330
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 81/117 (69%), Gaps = 4/117 (3%)
Query: 130 VSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFR 189
V ++ L +LHVD L QR+ +T PSSS S+ + V LS ++V++L+A+ QQE + R
Sbjct: 159 VPRKTLTNLHVDHLLQRS---STLPSSSNSHATGVHSLSGGVNKVSSLEAKAHQQETALR 215
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS 246
I+C ND++G IG+ G +IR QSE G ISVG ++ EC++RLIT TASE PE RYS
Sbjct: 216 IICCNDRIGGDIGRSGNMIRVPQSETGVTISVGPSVAECEDRLIT-TASESPELRYS 271
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG +IG+ G ++ + E + I + +P ER++ V+A E PE+ SP
Sbjct: 12 FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 71
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFS-SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A + ++ V R+IEG + D + G V++RL+VA+ Q G L+G+ G I ++
Sbjct: 72 AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS 131
Query: 307 TGTSIRII--SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+G ++R++ +++L C +DRVV+++GE V+ A V LR
Sbjct: 132 SGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLR 177
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 8/175 (4%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-MPECDERLITVTAS 238
R Q+ S R++C +G VI KGG I ++ E+GA I V +T E D+ L+T+ A
Sbjct: 37 RHIQRIFSLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAK 96
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E P + ++ + + D++ G RL+V+ NQ+GC++GKGG
Sbjct: 97 ERLHFPRGPQTSHCIFLYRMCM-----RLWDWNCPSGTF-TVRLLVSFNQIGCVIGKGGQ 150
Query: 299 IISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
II +R +G IRI+ D L C ++ ++QIS E S V+ +Y + RL DN
Sbjct: 151 IIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDN 205
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 92 ESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRNSVLT 151
ESG Q +R + P S S+E + I + + + +I LH + ++ +
Sbjct: 158 ESGAQ--IRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQHLFVY 215
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
P I Y S+ + L S A + +E S ++C +G +IGKG II +
Sbjct: 216 VVP---IGYSSSGSLMGLTSG--APIMDEASSKEFSLCLVCPIGNIGGMIGKGDVIINQI 270
Query: 212 QSEAGAFISVGAT-MPECDERLITVTASE 239
+ E GA I V +T + E ++ L+T++A E
Sbjct: 271 RQEFGATIKVDSTSVVEANDCLVTISAKE 299
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG +IG+ G ++ + E + I + +P ER++ V+A E PE+ SP
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 74
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFS-SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A + ++ V R+IEG + +D + G V++RL+VA+ Q G L+G+ G I ++
Sbjct: 75 AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT 134
Query: 307 TGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+G ++R++ +++L C +DRVV++ G+ V+ A+ V LR
Sbjct: 135 SGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLR 179
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E +R LC K G++IGKGG I + ++SE + + + +P C+ER++T+ ++ +
Sbjct: 42 EETVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEELN 101
Query: 244 RYS-------PAQKAVVLVFSRLIEGTSEKGLDFSSNKG--LLVNARLVVASNQVGCLLG 294
+ PA A+ V ++ + + G V R++V S+Q+GC++G
Sbjct: 102 HFGDDGELVCPALDALFKVHDMVVADIDHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVIG 161
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKC--ISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
KGG +I +R T IR+I D L C +D ++QI GE V++A+Y V L N
Sbjct: 162 KGGQVIQNLRNDTNAQIRVIKDHLPSCALTLSHDELLQIIGEPLVVREALYQVASLLHAN 221
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 207 IIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEK 266
I ++ E GA I V + + D+ +I +++ E E + SPA A + RL + SEK
Sbjct: 288 FINQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQ-SPAVNAAI----RLQQRCSEK 342
Query: 267 -GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISE 324
G D + L ++ RL+V+S+Q+GCL+GKGG +ISEMR VT +IRI+ + + K E
Sbjct: 343 VGKDAND---LAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 399
Query: 325 NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++ +VQI+G A+ V RLR N F
Sbjct: 400 DEEMVQITGNPDAAMKALTQVILRLRANSF 429
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPEC 228
++Q V+ R+L +D++G VIGKGG +I+ L+++ A I V +P C
Sbjct: 141 EKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPSC 188
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 102/171 (59%), Gaps = 13/171 (7%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E+ FR+LC K G+VIG+ G +I+ ++SE GA + V + +ER+I V++++ +
Sbjct: 342 EIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSNDDGLAP 401
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
AQ A+ V+ +++ SS + + RL+V ++Q+GCL+GKGG+II ++R
Sbjct: 402 MLAAQVALFRVYRCIVD---------SSGSDVPLPFRLLVQTSQIGCLIGKGGSIIRQIR 452
Query: 305 KVTGTSIRII-SDQLLKCISENDRVVQISGEF--SKVKDAVYNVTGRLRDN 352
TG ++R++ SD L C + +D +++I G++ + V+GRLR N
Sbjct: 453 NETGATVRVLPSDALPACANADDELLEI-GQWPADACALGIRIVSGRLRGN 502
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 32/179 (17%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE------ 239
V FR+LC ++G VIGK G +I+AL++E GA + V T DER++ V + E
Sbjct: 70 VQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVASGEELMMDD 129
Query: 240 --GPESRYSPAQKAVVLVFSRL-------IEGT---------------SEKGLDFSSNKG 275
G + + A++A+ +F + ++GT S G + S N G
Sbjct: 130 GDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSSTGGERSMNGG 189
Query: 276 LLVN-ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLL-KCISENDRVVQIS 332
V RL+V QVG L+GKGG +IS +R +G ++R++ +L C S D ++QI+
Sbjct: 190 RAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATMLPTCASRGDELLQIT 248
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS---- 238
++ +R LC K+G++IGKGG I + L++++ + I + MP DER++T+ +S
Sbjct: 7 NEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSEET 66
Query: 239 ---EGPESRYSPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLL-----VNARLVVASNQV 289
E PAQ A+ +V R+I E + + V R++V ++Q+
Sbjct: 67 NLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPTDQI 126
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGR 348
GC++GKGG +I +R T IRI D+ L ++ D ++ I GE S V+ A+Y V R
Sbjct: 127 GCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKALYQVATR 186
Query: 349 LRDN 352
L +N
Sbjct: 187 LHEN 190
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
++ S R++C +G VIGKGG II+ ++ E+ A I V ++ E ++ +I ++A E E
Sbjct: 247 KDFSLRLVCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGNDCIIFISAKEFFED 306
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ SP A + + R E T ++ D ++ RL+V +Q+GCL+GKGG IISEM
Sbjct: 307 Q-SPTMNAALRMQPRCSEKTEKESGDS------VITTRLLVGRSQIGCLMGKGGAIISEM 359
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS--GTLNT 360
R +T +IRIIS D L K E+D +VQI+G +A+ V RL+ N F G L T
Sbjct: 360 RNLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILRLKANIFGRDGALTT 419
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 21/195 (10%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
+Q + +RILC + K+G VIGKGG I++AL+ E A I+V ++P DER+I + ++
Sbjct: 38 GNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSA 97
Query: 239 -----------EGPESR--------YSPAQKAVVLVFSRLIEGTSEKGLDF-SSNKGLLV 278
E PE + PAQ A++ V R+IE G +F N+ +V
Sbjct: 98 PTKNPKEHDSNEDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVV 157
Query: 279 NARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSK 337
ARL+V +N VGCLLGK G +I +R TG +IR++ ++ L C +D +VQISG+ +
Sbjct: 158 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAV 217
Query: 338 VKDAVYNVTGRLRDN 352
K A+Y V+ L N
Sbjct: 218 AKKALYEVSTLLHQN 232
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 11/167 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E S +ILC K+G VIGKGG ++ LQ E GA I V + E +ER+I V++ E+
Sbjct: 313 EFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSF---EAL 369
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
++P + + + +L TSE S+KG + RL+V S++VGC+LG+GG +I+EMR
Sbjct: 370 WNPRSQTIEAIL-QLQNKTSEY-----SDKGGMT-TRLLVPSSKVGCILGQGGHVINEMR 422
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ T IR+ S + KC S+++ +VQISG F KDA+ + RLR
Sbjct: 423 RRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 469
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 21/195 (10%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--- 235
+Q + +RILC + K+G VIGKGG I++AL+ E A I+V ++P DER+I +
Sbjct: 66 GNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSA 125
Query: 236 --------TASEGPESR--------YSPAQKAVVLVFSRLIEGTSEKGLDF-SSNKGLLV 278
++E PE + PAQ A++ V R+IE G +F N+ +V
Sbjct: 126 PTKNPKEHNSNEDPEREEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVV 185
Query: 279 NARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSK 337
ARL+V +N VGCLLGK G +I +R TG +IR++ ++ L C +D +VQISG+ +
Sbjct: 186 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAV 245
Query: 338 VKDAVYNVTGRLRDN 352
K A+Y V+ L N
Sbjct: 246 AKKALYEVSTLLHQN 260
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 11/167 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E S +ILC K+G VIGKGG ++ LQ E GA I V + E +ER+I V++ E+
Sbjct: 341 EFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSF---EAL 397
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
++P + + + +L TSE S+KG + RL+V S++VGC+LG+GG +I+EMR
Sbjct: 398 WNPRSQTIEAIL-QLQNKTSEY-----SDKGGMT-TRLLVPSSKVGCILGQGGHVINEMR 450
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ T IR+ S + KC S+++ +VQISG F KDA+ + RLR
Sbjct: 451 RRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 497
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V+FR+LC++ ++G VIGK GT+I+ LQ GA I + + E +R+I V +
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 239 -------EGPESRYSPAQKAVVLVFSRLIEGTSE-KGLDFSSNKGLLVNARLVVASNQVG 290
+G S AQ+A++ VF R++E +E +G++ V+ RLV S Q G
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRT---VSCRLVADSAQAG 164
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
++GKGG ++ +++K TG I + D L CIS D V++ S S AV +
Sbjct: 165 SVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIECSASRSMFGSAVTRIV 220
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 103/176 (58%), Gaps = 24/176 (13%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC--DERLITVTAS 238
++ +E+ F++LC + VIGKGG+ I+ ++ +G+ I V + +C DE +I VTA+
Sbjct: 307 SRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTAT 366
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E P+ S A +AV+L+ + + +E V +L+V+S +GC++GK G+
Sbjct: 367 ESPDDMKSMAVEAVLLLQEYINDEDAEN-----------VKMQLLVSSKVIGCVIGKSGS 415
Query: 299 IISEMRKVTGTSIRIISDQLLKCISEN--DRVVQISGEFSKVKDAVYNVTGRLRDN 352
+I+E+RK T +I CIS+ D +V++SGE S V+DA+ + RLR++
Sbjct: 416 VINEIRKRTNANI---------CISKGKKDDLVEVSGEVSSVRDALIQIVLRLRED 462
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + + V +RILC D VG VIGK G +I A++ A I V + C +R+IT+
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 238 S--EGPE------SRYSP---AQKAVVLVFSRLI----EGTSEKGLDFSSNKGLLVNARL 282
S E E S P AQ A++ V+ ++ E ++ +D NK RL
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK----ECRL 143
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLK----CISENDRVVQISGEFSKV 338
+V +Q L+GK G I +R+ T S++++S + C E D VV ISGE V
Sbjct: 144 LVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESV 203
Query: 339 KDAVYNVT 346
K A++ V+
Sbjct: 204 KQALFAVS 211
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 108/188 (57%), Gaps = 25/188 (13%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC--DERLITVTAS 238
++ +E+ F++LC + VIGKGG+ I+ ++ +G+ I V + +C DE +I VTA+
Sbjct: 307 SRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTAT 366
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E P+ S A +AV+L+ + + +E V +L+V+S +GC++GK G+
Sbjct: 367 ESPDDMKSMAVEAVLLLQEYINDEDAEN-----------VKMQLLVSSKVIGCVIGKSGS 415
Query: 299 IISEMRKVTGTSIRIISDQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
+I+E+RK T +I CIS + D +V++SGE S V+DA+ + RLR++ G
Sbjct: 416 VINEIRKRTNANI---------CISKGKKDDLVEVSGEVSSVRDALIQIVLRLREDVL-G 465
Query: 357 TLNTARTR 364
++ TR
Sbjct: 466 DKDSVATR 473
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + + V +RILC D VG VIGK G +I A++ A I V + C +R+IT+
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 238 S--EGPE------SRYSP---AQKAVVLVFSRLI----EGTSEKGLDFSSNKGLLVNARL 282
S E E S P AQ A++ V+ ++ E ++ +D NK RL
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK----ECRL 143
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLK----CISENDRVVQISGEFSKV 338
+V +Q L+GK G I +R+ T S++++S + C E D VV ISGE V
Sbjct: 144 LVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESV 203
Query: 339 KDAVYNVT 346
K A++ V+
Sbjct: 204 KQALFAVS 211
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 102/170 (60%), Gaps = 12/170 (7%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E++FR+LC K G+VIG+ G +I+ ++S+ GA + V + +ER+I V++S+ +
Sbjct: 312 EITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSSDDGLAP 371
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
AQ A+ V+ ++E S+ + + RL+V ++Q+GCL+GKGG+II ++R
Sbjct: 372 MLAAQVALFRVYRCIVE---------SAGNEIPLPFRLLVQTSQIGCLIGKGGSIIKQIR 422
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA--VYNVTGRLRDN 352
TG ++R++ + L + +D +++I G++ A + V+GRLR N
Sbjct: 423 NETGATVRVLPSEALPSCANDDELLEI-GQWPADACALGIRIVSGRLRGN 471
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 45/245 (18%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV------TASE 239
V +R+LC ++G VIGK G +I+A ++E GA + V T DER+I V T E
Sbjct: 58 VRYRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADERVILVASGDDLTVGE 117
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN---------------ARLVV 284
E + A+ A+ +F + T E+G+ + RL+V
Sbjct: 118 DGEG-MTTAEVALFRIFDTI---TGEEGVTAARGGEGEGEGEASGGSTRGASTPICRLLV 173
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLL-KCISENDRVVQISG---------- 333
QVG L+GKGGT+IS +R +G ++R++ +L C S+ D ++QI+
Sbjct: 174 PRVQVGSLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDELLQITAPSRDADGAER 233
Query: 334 ----EFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVL---TETSPYSRLKDP-ASF 385
+ VK+A+ + LR+ + S T RS +T+P++ ++ P A
Sbjct: 234 DQKLSMASVKNALRMIAKHLRE-YPSKNAATESNRSPFEAFMIGNKTAPHAGVESPGAKN 292
Query: 386 GVHSS 390
G H S
Sbjct: 293 GGHMS 297
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 106/188 (56%), Gaps = 24/188 (12%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC--DERLITVTAS 238
++ +E+ ++LC + VIGKGG+ I+ ++ +G+ I V + +C DE +I VTA+
Sbjct: 306 SRSKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTAT 365
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
E P+ S A +AV+L+ + + +EK V +L V+S +GC++GK G+
Sbjct: 366 ESPDDMKSMAVEAVLLLQEYINDEDAEK-----------VKMQLFVSSKDIGCVIGKSGS 414
Query: 299 IISEMRKVTGTSIRIISDQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
+I+E+RK T +I CIS + D +V+++GE S V++A+ + RLR++
Sbjct: 415 VINEIRKRTNANI---------CISKGKKDDLVEVAGEISSVRNAIIQIVLRLREDVLGD 465
Query: 357 TLNTARTR 364
+ A +R
Sbjct: 466 RDSVAASR 473
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 109/245 (44%), Gaps = 43/245 (17%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS------- 238
V +RILC D VG VIGK G +I A++ A I V + C +R+IT+ S
Sbjct: 38 VIYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEE 97
Query: 239 --EGPESRYSP---AQKAVVLVFSRLIEGTSEK-GLDFSSNKGLLVNARLVVASNQVGCL 292
+ +S P AQ A++ V+ ++ E +D K L L+V S+Q L
Sbjct: 98 EIDFMKSETEPLCCAQDALLKVYDAIVASDEENIKIDRDDKKECL----LLVPSSQSFSL 153
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLK----CISENDRVVQISGEFSKVKDAVYNVTGR 348
+GK G I +R T S++++S + C + D +V ISGE VK A++ V
Sbjct: 154 IGKAGENIKRIRSTTRASVKVVSKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAV--- 210
Query: 349 LRDNHFSGTLNTARTRSTSSVLTETSPYSRLK-DPASFGVHSSVAVSHDFSQPPLTQDGN 407
S++L + +P + D V +S+ VS D S Q G
Sbjct: 211 ------------------SAILYKINPREHIPLDSTGQDVPASIIVSSDLSNSVYPQTGF 252
Query: 408 WSSSE 412
+S+ +
Sbjct: 253 YSNQD 257
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 21/198 (10%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
R E S +ILCS K+G VIGKGG+ ++ +Q E GA I V E +ER I V+A
Sbjct: 304 GREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSAF 363
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
EG ++P + + + +L + TS DFS KG+++ RL+V S++VGC+LG+GG
Sbjct: 364 EG---LWNPRSQTIDAIL-QLQDKTS----DFSE-KGMII-TRLLVPSSKVGCILGQGGQ 413
Query: 299 IISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
+I+EMR+ IR+ + KC S+++ +VQISG + KDA+ + RLR
Sbjct: 414 VINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLR------- 466
Query: 358 LNTARTRSTSSVLTETSP 375
ART ++ TE P
Sbjct: 467 ---ARTLRDANAGTEPGP 481
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 22/187 (11%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV------------ 235
+RILC + K+G VIGKGG I++AL+ E + I+V ++ DER+I +
Sbjct: 46 YRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMD 105
Query: 236 -----TASEGPESRYSP---AQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVAS 286
A G + + P AQ A++ V R++E G+ N +V ARL+V +
Sbjct: 106 GDEGLPAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPN 165
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
N VGC+LGK G +I +R TG +IR++ +D L C + D +VQISG+ + K A+Y +
Sbjct: 166 NMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEI 225
Query: 346 TGRLRDN 352
+ L N
Sbjct: 226 SILLHQN 232
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 44/213 (20%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP-ECDERLITVTA-- 237
T + V FR+LC + GA+IGKGG++IR LQS G+ I V +P +ER++ + A
Sbjct: 237 TAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPS 296
Query: 238 -----------SEGPESRY---------------------SPAQKAVVLVFSRLIEGTSE 265
SE P S S AQ A++ V R++ G
Sbjct: 297 GKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDA 356
Query: 266 -----KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLL 319
GLD ++ L R++V NQV L+ KGG +I +R+ +G +RI S DQ+
Sbjct: 357 ASVDGDGLDKGESESL---CRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIP 413
Query: 320 KCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
C D V+QI+G+FS VK A+ +T L+++
Sbjct: 414 PCAFPGDVVIQITGKFSSVKKALLLITNCLQES 446
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 33/37 (89%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI 219
++EVSFR+LC DKVG++IGKGG ++RALQ+E+GA I
Sbjct: 495 EEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASI 531
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 212 QSEAGAFISVGATMPECDERLITVTASEG-PESRYSPAQKAVVLVFSRLIEGTSEKG--L 268
Q + +F SV CD T +G P S Y + VFS+L++ + G +
Sbjct: 170 QCISTSFFSVSVNGSNCDFFKSTKGLRQGDPLSPYFFV--LAIEVFSKLLQSKFDSGRLM 227
Query: 269 DFSSNK-----GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCIS 323
+FSS+K V+ RL+ +++ G ++GKGG++I ++ VTG+ IR+I D +
Sbjct: 228 EFSSSKRPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIP---VP 284
Query: 324 ENDRVVQISGEFSKVKD 340
+RVV I K KD
Sbjct: 285 SEERVVLIIAPSGKKKD 301
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
++ +R LC K G++IGKGG I + ++SE + + + +P C+ER++T+ ++ +
Sbjct: 17 EDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 76
Query: 244 RYS-------PAQKAVVLVFSRLIEGTSEKGLDFSS---NKGLLVNARLVVASNQVGCLL 293
+ PA A+ V ++ + + V R++V S+Q+GC++
Sbjct: 77 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVI 136
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKC--ISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
GKGG +I +R T IR+I D L C +D ++ I GE V++A+Y V L D
Sbjct: 137 GKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHD 196
Query: 352 N 352
N
Sbjct: 197 N 197
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 207 IIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEK 266
I ++ E GA I V + + D+ +I +++ E E + SPA A + RL + SEK
Sbjct: 265 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAI----RLQQRCSEK 319
Query: 267 -GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISE 324
G D + L ++ RL+V+S+Q+GCL+GKGG +ISEMR VT +IRI+ + + K E
Sbjct: 320 VGKDAND---LAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 376
Query: 325 NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++ +VQI+G A+ V RLR N F
Sbjct: 377 DEEMVQITGSPDAAMKALTQVILRLRANSF 406
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPEC------DERLIT 234
++Q V+ R+L +D++G VIGKGG +I+ L+++ A I V +P C DE L+
Sbjct: 117 EKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLI 176
Query: 235 V 235
+
Sbjct: 177 I 177
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 97/168 (57%), Gaps = 10/168 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+++ FRILC NDK +++ I+ LQ++ G + + + DER++ +T+ EGP+
Sbjct: 337 EDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSREGPDH 396
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
PAQ+AV+ + + ++ D + ++ RL+V ++++ C G+ G+ +S++
Sbjct: 397 ELFPAQEAVLHIQTHIV--------DLGPDMDNIITTRLLVPASEIACFDGREGS-LSDI 447
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++ T +++I+ + L C E+D ++QI GE ++A+ VT +LR
Sbjct: 448 QRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLR 495
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 28/201 (13%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-TVTAS----EGP 241
SFRILC K + + ++ ++GA ++V R+I TV + +G
Sbjct: 86 SFRILCPECKAYSF---SPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGC 142
Query: 242 ESRYSPAQKAVVLVFSRLIE----------GTSEKGLDFSSNKGLLVNARLVVASNQVGC 291
+SPAQ+A+++V R++E +G D + ++G RL+V VGC
Sbjct: 143 PPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKD-ARDRGK-TTTRLIVPKQHVGC 200
Query: 292 LLGKGGTIISEMRKVTGTSIRIIS--DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
LLGKGG II +MR T T IRI+S +C+S ++ VVQ+ G+ + VK AV +T RL
Sbjct: 201 LLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIITDRL 260
Query: 350 RDN------HFSGTLNTARTR 364
+++ F G LN+ R
Sbjct: 261 KESLHRDRGPFRGRLNSPEPR 281
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
++ +R LC K G++IGKGG I + ++SE + + + +P C+ER++T+ ++ +
Sbjct: 42 EDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 101
Query: 244 RYS-------PAQKAVVLVFSRLIEGTSEKGLDFSS---NKGLLVNARLVVASNQVGCLL 293
+ PA A+ V ++ + + V R++V S+Q+GC++
Sbjct: 102 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVI 161
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKC--ISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
GKGG +I +R T IR+I D L C +D ++ I GE V++A+Y V L D
Sbjct: 162 GKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHD 221
Query: 352 N 352
N
Sbjct: 222 N 222
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 207 IIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEK 266
I ++ E GA I V + + D+ +I +++ E E + SPA A + RL + SEK
Sbjct: 290 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAI----RLQQRCSEK 344
Query: 267 -GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISE 324
G D + L ++ RL+V+S+Q+GCL+GKGG +ISEMR VT +IRI+ + + K E
Sbjct: 345 VGKDAND---LAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 401
Query: 325 NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++ +VQI+G A+ V RLR N F
Sbjct: 402 DEEMVQITGSPDAAMKALTQVILRLRANSF 431
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPEC------DERLIT 234
++Q V+ R+L +D++G VIGKGG +I+ L+++ A I V +P C DE L+
Sbjct: 142 EKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLI 201
Query: 235 V 235
+
Sbjct: 202 I 202
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ E A I V +R++ ++ E PE+ SP
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSP 107
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A AV+ VF R + G SE + ++ + RL+VAS Q L+GK G++I +++ T
Sbjct: 108 AMNAVIRVFKR-VSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENT 166
Query: 308 GTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
G S+R++S D++ + ++R+V++ GE KV A+ V G LR
Sbjct: 167 GASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLR 210
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 12/177 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS- 246
+R LC K G++IGKGG I + ++SE + + + +P C+ER++T+ ++ + +
Sbjct: 13 YRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGD 72
Query: 247 ------PAQKAVVLVFSRLIEGTSEKGLDFSS---NKGLLVNARLVVASNQVGCLLGKGG 297
PA A+ V ++ + + V R++V S+Q+GC++GKGG
Sbjct: 73 DGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGG 132
Query: 298 TIISEMRKVTGTSIRIISDQLLKC--ISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+I +R T IR+I D L C +D ++ I GE V++A+Y V L DN
Sbjct: 133 QVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDN 189
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 87/150 (58%), Gaps = 10/150 (6%)
Query: 207 IIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEK 266
I ++ E GA I V + + D+ +I +++ E E + SPA A + RL + SEK
Sbjct: 257 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAI----RLQQRCSEK 311
Query: 267 -GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISE 324
G D + L ++ RL+V+S+Q+GCL+GKGG +ISEMR VT +IRI+ + + K E
Sbjct: 312 VGKDAND---LAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 368
Query: 325 NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++ +VQI+G A+ V RLR N F
Sbjct: 369 DEEMVQITGSPDAAMKALTQVILRLRANSF 398
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPEC------DERLIT 234
++Q V+ R+L +D++G VIGKGG +I+ L+++ A I V +P C DE L+
Sbjct: 109 EKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLI 168
Query: 235 V 235
+
Sbjct: 169 I 169
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS----- 238
Q SFRILC K G + I Q ++GA I++ A R+I +
Sbjct: 91 QATSFRILCPESKT---YGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEMADGVPRDV 147
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL---------LVNARLVVASNQV 289
+G +SPAQ+A+++V R++E + G D G V RLVV V
Sbjct: 148 DGRPPMFSPAQEALIMVHRRILETEPDDG-DEDGEYGPRGKDARDRGKVTTRLVVPRLHV 206
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIIS-DQ-LLKCISENDRVVQISGEFSKVKDAVYNVTG 347
GCLLGKGG II +MR T T IRI+ DQ +C+S ++ VVQI GE + VK AV ++
Sbjct: 207 GCLLGKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISD 266
Query: 348 RLRDN 352
RL+++
Sbjct: 267 RLKES 271
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 93/167 (55%), Gaps = 10/167 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E+ FRILC NDK ++G I+ LQ E G + + + DER + +T+ EGP+
Sbjct: 341 EIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSREGPDHE 400
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PAQ+A++ + + ++ D + ++ RL+V S++V C G+ G+ +S+++
Sbjct: 401 LFPAQEALLHIQTHIV--------DLGPDNDNIITTRLLVPSSEVACFEGRDGS-LSDIQ 451
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ T +++I+ ++L C E+D ++QI G + A+ VT ++R
Sbjct: 452 RQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKIR 498
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 8/172 (4%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+E S R+LC+ VG VIGKGG II+ ++ E+GAFI V ++ E D+ +ITV+A E E
Sbjct: 214 KEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFED 272
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
SP A V + R E T + S RL+V+++++GCL+GKGG+II+E+
Sbjct: 273 PVSPTINAAVHLQPRCSEKTDPESAIPS------YTTRLLVSTSRIGCLIGKGGSIITEI 326
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
R+ + +IRI+S + + K +E++ +VQISG+ V+ A+ +T RL+ N F
Sbjct: 327 RRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFF 378
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 88/151 (58%), Gaps = 11/151 (7%)
Query: 211 LQSEAGAFISVGATMPECDERLITVTASE-------GPESRYSPAQKAVVLVFSRLIEGT 263
++++ A I +G ++ CDER+IT+ +S E + PAQ A+ V +L
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKL--SI 58
Query: 264 SEKGLDFSSNKGLL-VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQ-LLKC 321
+ + S++GL V RL+V S+Q+GC++GKGG II +R TG IR++S++ L C
Sbjct: 59 DDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPAC 118
Query: 322 ISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
D ++QISG+ + V+ A+ V+ RL DN
Sbjct: 119 AISGDELLQISGDSTVVRKALLQVSSRLHDN 149
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 167 LSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GAT 224
LS++ D + ++ +V+ R+L +D++G +IGKGG II+ ++S+ GA I V
Sbjct: 56 LSIDDD-IGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNEN 114
Query: 225 MPEC---DERLITVTASEGPESRYSPAQKAVVLVFSRL 259
+P C + L+ ++ + +KA++ V SRL
Sbjct: 115 LPACAISGDELLQISGDS------TVVRKALLQVSSRL 146
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 94/157 (59%), Gaps = 10/157 (6%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA- 237
+R V+FR+LC +VGA+IGK G +I++LQ GA I + P+ +R+I V+A
Sbjct: 18 SRHYTTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAP 77
Query: 238 SEGPESRYSPAQKAVVLVFSRLIE--GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
S + S AQ+A++ VF R+++ +E G L+V+ RL+ ++QVG ++GK
Sbjct: 78 SVTEDGELSTAQEALLKVFDRVLDVAAGTEVG-------DLVVSCRLLAETSQVGAVIGK 130
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQIS 332
G ++ ++R TG IR++++ L + +D +V++S
Sbjct: 131 AGKVVEKIRMDTGCKIRVLNEGLPAGTAPSDEIVEVS 167
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 95/173 (54%), Gaps = 18/173 (10%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ + E + I V +R++ V+ E PE+ SP
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSP 114
Query: 248 AQKAVVLVFSRLIEGTSE---------KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
A AVV +F R + G SE GL FSS RL+VAS Q L+GK G+
Sbjct: 115 AMDAVVRIFKR-VSGFSETDAENQESAAGLAFSS-------IRLLVASTQAINLIGKQGS 166
Query: 299 IISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+I +++ T S+R++S D++ + N+R+V+I GE KV A+ V G LR
Sbjct: 167 LIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLR 219
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G I+ + E A I + P ER + V+A E P+S
Sbjct: 151 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSA 210
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PA ++ V R+++G SS G V+ RL+V ++Q G L+GK G + ++
Sbjct: 211 LPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQ 270
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ G+ + V AV + LR
Sbjct: 271 EASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLR 317
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 96/167 (57%), Gaps = 5/167 (2%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ + E A I V +R++ ++ E PE+ SP
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSP 139
Query: 248 AQKAVVLVFSRLIEGTSE---KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
A AV+ VF R + G SE G + + + RL+VAS Q L+GK G++I ++
Sbjct: 140 AMDAVIRVFKR-VTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQ 198
Query: 305 KVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ TG S+R++S D++ + ++R+V++ GE KV+ A+ V G LR
Sbjct: 199 ESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLR 245
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVGA+IG+ G I+ + E A I V +R++ ++ E PE+ SP
Sbjct: 76 FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A AV+ VF R + G + D N G + + RL+VAS Q L+GK G++I + +
Sbjct: 136 AMDAVLRVFRR-VSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVEN 194
Query: 307 TGTSIRIISDQLLKCISEND-RVVQISGEFSKVKDAVYNVTGRLR 350
+G S+RI+S++ + D R+V + GE K+ A+ + G LR
Sbjct: 195 SGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLR 239
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVGA+IG+ G I+ + E A I V +R++ ++ E PE+ SP
Sbjct: 76 FRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A AV+ VF R + G + D N G + RL+VAS Q L+GK G++I + +
Sbjct: 136 AMDAVLRVFRR-VSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVEN 194
Query: 307 TGTSIRIISDQLLKCISEND-RVVQISGEFSKVKDAVYNVTGRLR 350
+G S+RI+S++ + D R+V + GE K+ A+ + G LR
Sbjct: 195 SGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLR 239
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 113/220 (51%), Gaps = 27/220 (12%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ + E + I V +R++ V+ E PE+ SP
Sbjct: 54 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSP 113
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFS-SNKGL-LVNARLVVASNQVGCLLGKGGTIISEMRK 305
A AVV +F R + G SE + S GL + RL+VAS Q L+GK G++I +++
Sbjct: 114 AMDAVVRIFKR-VSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQE 172
Query: 306 VTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD---NH-----FSG 356
T S+R++S D++ + ++R+V+I GE KV A+ V G LR +H F
Sbjct: 173 NTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEK 232
Query: 357 TLNT-------ARTRSTSSVLTETS--------PYSRLKD 381
T N A T S S+L TS PYS +D
Sbjct: 233 TYNASTSQDRQAETWSDKSLLHTTSRTSIFADIPYSTKRD 272
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGA+IG+ G I+ + E+ A I + P ER + ++A + P++
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA + V+ R+ +G+ N + RL+V ++Q G L+GK G I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +RI+ L ++ +DRVV+I GE V+ A+ ++ LR
Sbjct: 227 DSSKSIVRIVETLPLVALN-DDRVVEIQGEPVGVQKALESIASHLR 271
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G I+ + E A I + P ER + V+A + P+S
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
+ PA ++ V R+++G E + N G V+ RL+VA++Q G L+GK G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGL-EGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQ 202
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ G+ + V AV + LR
Sbjct: 203 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 249
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G I+ + E A I + P ER + V+A + P+S
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
+ PA ++ V R+++G E + N G V+ RL+VA++Q G L+GK G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGL-EGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQ 202
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ G+ + V AV + LR
Sbjct: 203 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 249
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 94/164 (57%), Gaps = 15/164 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA-------- 237
V+FR+LC ++G VIGK G I++ LQS+ GA I V + D R+I V A
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 238 ---SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
E S AQ+AV+ VF R++E + +D G +V+ RL+ ++QVG ++G
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAV--VD-GVPPGGVVSCRLLAETSQVGSVIG 167
Query: 295 KGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSK 337
KGG ++ ++R+ +G+ I+++ +++L C + D +V+ SG +
Sbjct: 168 KGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSLER 211
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGA+IG+ G I+ + E+ A I + P ER + ++A + P++
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA + V+ R+ +G+ N + RL+V ++Q G L+GK G I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +RI+ L +++ DRVV+I GE V+ A+ ++ LR
Sbjct: 227 DSSKSIVRIVETLPLVALND-DRVVEIQGEPVGVQKALESIASHLR 271
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L + KVG +IG+ G ++ + E + I + + ER++ V+A E P++
Sbjct: 49 ENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDAT 108
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA ++ V R+IEG E G + G + RL++A Q G L+GK G I ++
Sbjct: 109 ISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTI-TRLLLAGIQSGSLIGKQGATIKSIQ 167
Query: 305 KVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ +G + +++ S+ + C +D+V++I GE + V A+ V LR
Sbjct: 168 ENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLR 214
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGA+IG+ G I+ + E+ A I + P ER + ++A + P++
Sbjct: 109 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 168
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA + V+ R+ +G+ N + RL+V ++Q G L+GK G I ++
Sbjct: 169 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 228
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +RI+ L +++ DRVV+I GE V+ A+ ++ LR
Sbjct: 229 DSSKSIVRIVETLPLVALND-DRVVEIQGEPVGVQKALESIASHLR 273
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 92/168 (54%), Gaps = 9/168 (5%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG +IG+ G +I+ L E A + V +R+I ++ E E+ SP
Sbjct: 72 FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISP 131
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKG----LLVNARLVVASNQVGCLLGKGGTIISEM 303
A AV+ +F R + G SE S NKG L + RL+VAS Q L+GK GTII +
Sbjct: 132 AMDAVIRIFKR-VSGLSETD---SENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSI 187
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++ +G S+R++S D++ + +R+V + GE V A+ V G LR
Sbjct: 188 QESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLR 235
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGA+IG+ G I+ + E+ A I + P ER + ++A + P++
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA + V+ R+ +G+ N + RL+V ++Q G L+GK G I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +RI+ L +++ DRVV+I GE V+ A+ ++ LR
Sbjct: 227 DSSKSIVRIVETLPLVALND-DRVVEIQGEPVGVQKALESIASHLR 271
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 98/171 (57%), Gaps = 15/171 (8%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ + E A I V +R++ ++ E E+ SP
Sbjct: 63 FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLSP 122
Query: 248 AQKAVVLVFSR---LIEGTSEK----GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
A AV+ VF R L EG +++ G+ FSS RL+VAS Q L+GK G+II
Sbjct: 123 AMDAVIRVFKRVSGLPEGNAQELGAAGIAFSS-------IRLLVASTQAINLIGKQGSII 175
Query: 301 SEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+++ TG S+R++S +++ ++ ++R+V + GE KV +A+ + G LR
Sbjct: 176 KSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLR 226
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVG +IG+ G I+ L E A I + P ER + V+A E P++ +P
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A ++ V +++ S D S G++V+ RL+V + Q G L+GK G I +++ +
Sbjct: 102 AIDGLLRVHKCIMDVES----DVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+R++ + L +ND VV+I GE + V AV + LR
Sbjct: 158 NCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLR 200
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGA+IG+ G I+ + E A I + P ER + ++A + P++
Sbjct: 230 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 289
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA ++ V R+ + + + + G + RL+V S+Q G L+GK G I ++
Sbjct: 290 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 349
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +RI+ + + +DRVV+I GE V++AV ++ LR
Sbjct: 350 DSSKSIVRIV-ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLR 394
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG +IG+ G I+ L E A I + P ER + V+A E P++
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
+PA ++ V +++ S D S G++V+ RL+V + Q G L+GK G I ++
Sbjct: 99 IAPAIDGLLRVHKCIMDVES----DVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQ 154
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L +ND VV+I GE + V AV + LR
Sbjct: 155 EASNCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLR 200
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 103/178 (57%), Gaps = 6/178 (3%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + Q+V FRI+ + ++G VIGK G+ I+ ++ E A I + + +ER+I ++ S+
Sbjct: 54 RAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIIS-SK 112
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLV-NA-RLVVASNQVGCLLGKGG 297
E+ S A+ A++ V S +++ G +V NA RL++A +Q GCL+G G
Sbjct: 113 DSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSG 172
Query: 298 TIISEMRKVTGTSIRII-SDQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I ++R +G +I I+ +QL C S ++DR+VQISG+ V A+ + +LR+N
Sbjct: 173 QNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN 230
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ E A I V +R++ ++ E E+ SP
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSP 107
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A AV+ VF R + G SE ++ + RL+VAS Q L+GK G++I +++ T
Sbjct: 108 AMDAVIRVFKR-VSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENT 166
Query: 308 GTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
G S+R++S D++ + ++R+V++ GE KV A+ V G LR
Sbjct: 167 GASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLR 210
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGA+IG+ G I+ + E A I + P ER + ++A + P++
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA ++ V R+ + ++ + + G + RL+V S+Q G L+GK G I ++
Sbjct: 180 LSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +RI+ + + +DRVV+I GE V+ AV + LR
Sbjct: 240 DSSKSVVRIVEN-VPPVALNDDRVVEIQGEPLGVQKAVELIASHLR 284
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
K+G VIGK G+ I+ L+ E GA I + M ++R + +++ S S A+ A++ V
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 256 FSRLI---EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIR 312
+ L+ +G + ++G RL++A +Q G L+GK G I +R + S+R
Sbjct: 572 VTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVR 631
Query: 313 II-SDQLLKC--ISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSV 369
++ SDQL C E DR+VQISGE + V+ A+ V LRDN T+ T T+
Sbjct: 632 VLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTNPEAKTAYF 691
Query: 370 L 370
L
Sbjct: 692 L 692
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 111/207 (53%), Gaps = 14/207 (6%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + Q+V FRI+ + ++G VIGK G I+ ++ + A I + + +ER+I +++ +
Sbjct: 96 RAKGQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKD 155
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA---RLVVASNQVGCLLGKG 296
E + + A+KA+ + + LI + LD S V A RL++A +Q G L+G
Sbjct: 156 NDE-KVTDAEKALEQI-AHLILKEDDSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMS 213
Query: 297 GTIISEMRKVTGTSIRIIS-DQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDN- 352
G I ++R +G SI +++ +QL C S E+DRVVQ+SG+ V A+ + +LR+N
Sbjct: 214 GQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLRENP 273
Query: 353 -----HFSGTLNTARTRSTSSVLTETS 374
S T N A R + L TS
Sbjct: 274 PRQVISISPTYNYAAIRPSQPYLDPTS 300
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 103/178 (57%), Gaps = 6/178 (3%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + Q+V FRI+ + ++G VIGK G+ I+ ++ E A I + + +ER+I ++ S+
Sbjct: 54 RAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIIS-SK 112
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLV-NA-RLVVASNQVGCLLGKGG 297
E+ S A+ A++ V S +++ G +V NA RL++A +Q GCL+G G
Sbjct: 113 DSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSG 172
Query: 298 TIISEMRKVTGTSIRII-SDQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I ++R +G +I I+ +QL C S ++DR+VQISG+ V A+ + +LR+N
Sbjct: 173 QNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN 230
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 22/177 (12%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV-------T 236
++ +R LC K+G++I +G I++ + + IS+G T+ C+E ++T+
Sbjct: 290 KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESN 349
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ + SP Q + V R+I V+ ++Q+GC++GKG
Sbjct: 350 VFDNSNTFVSPTQNVLFRVHDRVISDE--------------VHDENFEEASQIGCVIGKG 395
Query: 297 GTIISEMRKVTGTSIRIISDQLLKC-ISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G II +R +G IRI+ D L + +D+++QISGE S V A+Y + RL DN
Sbjct: 396 GQIIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDN 452
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ + E A I V +R++ ++ E ES SP
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A AV+ VF R + G SE + K + RL+VAS Q L+GK G++I +++ T
Sbjct: 143 AMDAVIRVFKR-VSGLSE---NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQEST 198
Query: 308 GTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
G S+R++S D++ ++R+V++ GE KV A+ V G LR
Sbjct: 199 GASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLR 242
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
K+G VIGK G+ I+ L+ E GA I + M ++R + +++ S + A+ A++ V
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 256 FSRLI---EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIR 312
+ L+ +G + ++G RL++A +Q G L+GK G I +R + S+R
Sbjct: 573 VTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVR 632
Query: 313 II-SDQLLKC--ISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSV 369
++ SDQL C E DR+VQISGE + V+ A+ V LRDN T+ T T+
Sbjct: 633 VLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTTPEAKTAYF 692
Query: 370 L 370
L
Sbjct: 693 L 693
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD----ERLITVTASEGPES 243
FR++ + DKVG +IG+ G IR L E A + V + D ++++ ++A+E ++
Sbjct: 89 FRLVVAGDKVGGLIGRRGETIRRLCEETRARVRV---LDPADGVAGQQIVLISATEETQA 145
Query: 244 RYSPAQKAVVLVFSRL--IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
+PA A + +F + IEG + + FS++ + +ARL+V Q L+GK G +I
Sbjct: 146 ELAPAMDAAIKIFKHVNEIEGIN-ASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIK 204
Query: 302 EMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+++ TG++IRII D LL ++R+V+I G K +A+ +V G LR
Sbjct: 205 SIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLR 254
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 17/173 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
+R++ KVG++IG+ G +I+ + E A I + P +R++ ++ E PE+ SP
Sbjct: 29 YRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALSP 88
Query: 248 AQKAVVLVFSRL---------IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
A AV+ VF R+ G++ G FSS K L+VAS+Q L+GK G+
Sbjct: 89 AMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVK-------LLVASSQAINLIGKQGS 141
Query: 299 IISEMRKVTGTSIRIISDQLLKCISEND-RVVQISGEFSKVKDAVYNVTGRLR 350
I +++ T ++R+++++ + +D R+V+I GE SKV A+ V G+LR
Sbjct: 142 TIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLR 194
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 4/163 (2%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVG +IG+ G I+ L E A I + P ER + V+A E P++ +P
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A ++ V +++ S D S G++V+ RL+V + Q G L+GK G I +++ +
Sbjct: 102 AIDGLLRVHKCIMDVES----DVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+R++ + L +ND VV+I GE + V AV + LR
Sbjct: 158 NCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLR 200
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FRIL KVGA+IG+ G I+ + E+ A I + P ER + ++A + P+ + SP
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISP 175
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A ++ + R+ +G+ + G + RL+V ++Q G L+GK G I ++ +
Sbjct: 176 AMDGLLRIHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+RI+ + + +DRVV+I GE V+ AV + LR
Sbjct: 236 KAVVRIVEN-VPPVALNDDRVVEIQGEPLSVQKAVELIASHLR 277
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G +I+ + E A I + P ER + V+ E PES
Sbjct: 177 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 236
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
P+ ++ V R+++G G + V+ RL+V ++Q G L+GK G + ++
Sbjct: 237 LPPSMDGLLRVHMRIVDGLD--GEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQ 294
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ GE + V A+ + LR
Sbjct: 295 EASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLR 341
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G I+ + E A I + P ER + V+A E P+S
Sbjct: 116 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 175
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PA ++ V R+++G +G G V+ RL+VA++Q G L+GK G + ++
Sbjct: 176 LPPAMDGLLKVHKRIVDGL--EGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQ 233
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ GE V AV + LR
Sbjct: 234 EASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLR 280
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G I+ + E A I + P ER + V+A E P+S
Sbjct: 47 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 106
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PA ++ V R+++G +G G V+ RL+VA++Q G L+GK G + ++
Sbjct: 107 LPPAMDGLLKVHKRIVDGL--EGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQ 164
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ GE V AV + LR
Sbjct: 165 EASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLR 211
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGA+IG+ G I+ + E A I + P ER + ++A + P++
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA ++ V R+ + + + + G + RL+V S+Q G L+GK G I ++
Sbjct: 180 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +RI+ + + +DRVV+I GE V+ AV ++ LR
Sbjct: 240 DSSKSIVRIV-ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLR 284
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 6/183 (3%)
Query: 169 LESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC 228
LE R LD + V FR+L KVG++IG+ G I+ + E A I + P
Sbjct: 114 LEVVRRGGLDGL---ERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGT 170
Query: 229 DERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQ 288
ER + V+A E P+S PA ++ V R+++G +G G V+ RL+VA++Q
Sbjct: 171 AERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGL--EGDSSHMPPGGKVSTRLLVAASQ 228
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTG 347
G L+GK G + +++ + +R++ + L + ++DRVV++ GE V AV +
Sbjct: 229 AGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIAS 288
Query: 348 RLR 350
LR
Sbjct: 289 HLR 291
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 103/190 (54%), Gaps = 38/190 (20%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC--DERLITVTAS 238
++ +E+ F++LC + VIGKGG+ I+ ++ +G+ I V + +C DE +I VTA+
Sbjct: 615 SRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTAT 674
Query: 239 E--------------GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVV 284
E P+ S A +AV+L+ + + +E V +L+V
Sbjct: 675 EILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQEYINDEDAEN-----------VKMQLLV 723
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN--DRVVQISGEFSKVKDAV 342
+S +GC++GK G++I+E+RK T +I CIS+ D +V++SGE S V+DA+
Sbjct: 724 SSKVIGCVIGKSGSVINEIRKRTNANI---------CISKGKKDDLVEVSGEVSSVRDAL 774
Query: 343 YNVTGRLRDN 352
+ RLR++
Sbjct: 775 IQIVLRLRED 784
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 23/188 (12%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + + V +RILC D VG VIGK G +I A++ A I V + C +R+IT+
Sbjct: 336 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 395
Query: 238 S--EGPE------SRYSP---AQKAVVLVFSRLI----EGTSEKGLDFSSNKGLLVNARL 282
S E E S P AQ A++ V+ ++ E ++ +D NK RL
Sbjct: 396 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK----ECRL 451
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLK----CISENDRVVQISGEFSKV 338
+V +Q L+GK G I +R+ T S++++S + C E D VV ISGE V
Sbjct: 452 LVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESV 511
Query: 339 KDAVYNVT 346
K A++ V+
Sbjct: 512 KQALFAVS 519
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G +I+ + E A I + P ER + V+ E PES
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL---LVNARLVVASNQVGCLLGKGGTIIS 301
P+ ++ V R+++ GLD +++ V+ RL+V ++Q G L+GK G +
Sbjct: 246 LPPSMDGLLRVHMRIVD-----GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVK 300
Query: 302 EMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+++ + +R++ + L + ++DRVV++ GE + V A+ + LR
Sbjct: 301 AIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLR 350
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVGAVIG+ G I+ + E+ A I + P ER + ++A + P++
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL 184
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
SPA ++ V R+ +G + G + RL+V ++Q G L+GK G I ++
Sbjct: 185 VSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQGATIKSIQ 244
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ ++RI+ + + +DRVV+I GE V AV + LR
Sbjct: 245 DASKCALRIL-ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLR 289
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG++IG+ G +I+ + E A I + P ER + V+ E PES
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL---LVNARLVVASNQVGCLLGKGGTIIS 301
P+ ++ V R+++ GLD +++ V+ RL+V ++Q G L+GK G +
Sbjct: 246 LPPSMDGLLRVHMRIVD-----GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVK 300
Query: 302 EMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+++ + +R++ + L + ++DRVV++ GE + V A+ + LR
Sbjct: 301 AIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLR 350
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 111/209 (53%), Gaps = 7/209 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +++ + E A I + +R++ ++ E PE+ SP
Sbjct: 13 FRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQSP 72
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFS-----SNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
A AV+ VF R + G S D + + + RL+VAS+Q L+GK G+II
Sbjct: 73 AMDAVMRVFKR-VSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKS 131
Query: 303 MRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
+++ TG ++ +++ D+L + ++R+V+I GE KV A+ V G+LR ++
Sbjct: 132 IQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLVDHSVIPI 191
Query: 362 RTRSTSSVLTETSPYSRLKDPASFGVHSS 390
++ ++ +++ P D A +HS+
Sbjct: 192 FEKTYNATISQECPADARPDIAQPSLHSA 220
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQ 249
+L KVG++IG+ G I+ + E A I + P ER + V+A E P+S PA
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 250 KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
++ V R+I+G + G V+ RL+V ++Q G L+GK G + +++ +
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 310 SIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+R++ + L + ++DRVV++ GE + V AV + LR
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLR 162
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ + DKVG +IG+ G +I+ L A + V R++ ++A+E ++ +P
Sbjct: 96 FRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQAELAP 155
Query: 248 AQKAVVLVFSRL--IEGTSEKGLDFS--SNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
A A V +F + IEG + DF+ + + +ARL+V Q L+GK GT I M
Sbjct: 156 AMDAAVRIFKHVNDIEGINP---DFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLM 212
Query: 304 RKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++ TGT+IRII D+LL +R+V+I G KV +A+ +V G LR
Sbjct: 213 QESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLR 260
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVGAVIG G +R L E A + V ER + + A E P+ P
Sbjct: 61 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 120
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A A++ V+ +I ++ GLD N +V AR++ S Q L+G G++I+ ++K +
Sbjct: 121 AIDALLRVYECII---NDDGLDVRYNN--IVVARILTPSEQAASLIGDQGSVINYIKKAS 175
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
T+I +I L E+D +++I G ++V A+ V LR
Sbjct: 176 KTNIHVIDGDLPPVALEDDMIIEIWGLPARVHQALELVACHLR 218
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
KA L+ + E S+ D + G+ + RL+V ++Q G L+GKGG+ I E
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R+VTG SI++ SD L + +R V ISG + +Y++
Sbjct: 129 IREVTGASIQVASDML---PNSTERAVTISGTSEAITQCIYHI 168
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 370 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVSLA 428
Query: 342 VY 343
Y
Sbjct: 429 QY 430
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L VG +IG+ G ++ + E + I + + ER + V+A E PE+ SP
Sbjct: 87 FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSP 146
Query: 248 AQKAVVLVFSRLIEGT----SEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
A ++ V R+IEG E G G ++ RL+VA Q G L+G+ G I +
Sbjct: 147 AMDGILRVHKRIIEGGPDGRGELGRAQQGGSG-TISTRLLVAGTQAGSLIGRQGATIKAI 205
Query: 304 RKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++ +G +R++ ++ L C +DR+V++ GE V AV + LR
Sbjct: 206 QEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLR 253
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT--MPEC---DERLITVTASEG 240
+S R+L + + G++IG+ G I+A+Q +GA + V A +P C D+RL+ V G
Sbjct: 180 ISTRLLVAGTQAGSLIGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAG 239
Query: 241 PESRYSPAQKAVVLVFSRL 259
KAV L+ S L
Sbjct: 240 ------SVHKAVELIVSHL 252
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVG++IG+ G I+ + E A I + P ER + V+A E P+ P
Sbjct: 128 FRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRPIPP 187
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A ++ V ++I +D + G V RL+VA Q G L+GK G+ I ++ +
Sbjct: 188 AIDGLLRVHKQVIN-VDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGS 246
Query: 308 GTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR----DNHFSGTLNTAR 362
G +IR++ + L + +D +V+I GE + V AV + LR D G T
Sbjct: 247 GCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQM 306
Query: 363 TRSTSSVLTETSPYSRLKDP 382
R V P+ P
Sbjct: 307 QRPDVRVNQNVPPHQNWGPP 326
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 6/186 (3%)
Query: 170 ESDRVATLDARTQQ-----QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT 224
E+D++A + A + E FR+L S KVGA+IG+ G I+ + E+ A I +
Sbjct: 99 EADQLANVVAEDTKWPGWPGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDG 158
Query: 225 MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVV 284
P ER + ++A + P++ PA ++ V +R+ +G + RL+V
Sbjct: 159 PPGVPERAVMISAKDEPDALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLV 218
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYN 344
++Q G L+GK GT I ++ + ++RI+ + + +DRVV+I GE V AV
Sbjct: 219 PASQAGSLIGKQGTTIKSIQDASKCALRIL-ENVPPVALNDDRVVEIQGEPHDVHKAVEL 277
Query: 345 VTGRLR 350
+ LR
Sbjct: 278 IANHLR 283
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVG++IG+ G IR + + A I + P ER + V+A E P+ P
Sbjct: 164 FRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPDCSIPP 223
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A ++ V +++ D +S V RL+VA Q G L+GK G+ I + T
Sbjct: 224 AVDGLLRVHKQVVN-VDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDAT 282
Query: 308 GTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
G +IRI+ + L + +D +V+I GE S V AV V LR
Sbjct: 283 GCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLR 326
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 101/178 (56%), Gaps = 6/178 (3%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
+ + +V FRI+ + ++G VIGK G I+ ++ E A I + + +ER+I +++ +
Sbjct: 63 QAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKD 122
Query: 240 GPESRYSPAQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
E+ + A+KA+ + + ++ +G+S + L + RL++A +Q G L+G G
Sbjct: 123 N-ENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASG 181
Query: 298 TIISEMRKVTGTSIRIIS-DQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I ++R +G SI I++ +QL C S E+DRVVQISG+ V A+ + +LR N
Sbjct: 182 QNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVN 239
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
KA L+ + E S+ D S G+ + RL+V ++Q G L+GKGG+ I E
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 129 IREVTGASIQVASEML---PNSTERAVTISGTSEAITQCIYHI 168
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 370 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 428
Query: 342 VY 343
Y
Sbjct: 429 QY 430
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 110/215 (51%), Gaps = 9/215 (4%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +++ + E A I + +R++ ++ E PE+ SP
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLSP 114
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGL-------LVNARLVVASNQVGCLLGKGGTII 300
A AV+ VF R + G S D + + + RL+VAS+Q L+GK G+II
Sbjct: 115 AMDAVLRVFKR-VSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSII 173
Query: 301 SEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLN 359
+++ TG +R+++ D + + ++R+V+I GE KV A+ V G LR ++
Sbjct: 174 KSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKFLVDHSVI 233
Query: 360 TARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVS 394
++ ++ ++ P D A +HS+ A S
Sbjct: 234 PIFEKTYNATISLERPADACADNAQPSLHSAPAFS 268
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ L E A + V ER++ V+A E P P
Sbjct: 53 FRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELPP 112
Query: 248 AQKAVVLVFSRL--IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A A++ VF R+ I + +G S+ G+ ARLVV Q L+GK G I +++
Sbjct: 113 AMDALIRVFKRVNGISDGAAEGTQTSAAPGVCA-ARLVVPGAQAINLIGKQGASIKAIQE 171
Query: 306 VTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
TG +IR+IS D+ + +++++R+V+I GE KV A+ V+ LR
Sbjct: 172 GTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLR 219
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGKGG I+ + ++GA I++ + C ER++TVT S
Sbjct: 19 LTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVTVTGST------ 70
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A ++ + E S + S+ K V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 71 EAINNAFEMITKKFEEDVSNNMANSSTPK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG S+++ D L + +R V ISG + VY + + ++ G R +
Sbjct: 130 NTGASVQVAGDMLHQ---STERAVTISGTPEAITKCVYQICCVMLESPPKGATIPYRPKP 186
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAVSH-DF 397
T++ T T P ++ VH + AV + DF
Sbjct: 187 TNA--TATHP--------AYAVHGNYAVPYPDF 209
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+++ ++ +GC++G+GG I+E+R+++G +I+I + Q NDR V ISG + A
Sbjct: 260 IMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQE----GSNDRSVTISGTVEAINLA 315
Query: 342 VYNVTGRL 349
+ + L
Sbjct: 316 HFLINSSL 323
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 90/163 (55%), Gaps = 5/163 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L S+ KVGA+IG+ G +R L E A + V ER++ + A E P+ P
Sbjct: 64 FRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEPIPP 123
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A A++ V+ ++ ++ GL S+ ++ R+++ S Q L+G+ G++I+ + + +
Sbjct: 124 AMDALLRVYQNIV---NDDGLGMGSDSAVVT--RILIPSEQALNLIGEQGSMINLIEEAS 178
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
T IR++ L + DR+V+I G+ ++V+ A+ V LR
Sbjct: 179 QTDIRVLDCNLPPAALDEDRIVEIWGQPTRVRKALELVARHLR 221
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + Q+V FRI+ + ++G VIGK G+ I+ ++ E A I + + +ER+I ++ S+
Sbjct: 54 RAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIIS-SK 112
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLV-NA-RLVVASNQVGCLLGKGG 297
E+ S A+ A++ S +++ G +V NA RL++A +Q GCL+G G
Sbjct: 113 DSENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSG 172
Query: 298 TIISEMRKVTGTSIRII-SDQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I ++R +G +I I+ +QL C S ++DR+VQISG+ V A+ + +LR +
Sbjct: 173 QNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRTTNL 232
Query: 355 SG---TLN 359
+ TLN
Sbjct: 233 AADYVTLN 240
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
KA L+ + E S+ D + G+ + RL+V ++Q G L+GKGG+ I E
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R+VTG SI++ SD L + +R V ISG + +Y++
Sbjct: 129 IREVTGASIQVASDMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVSLA 334
Query: 342 VY 343
Y
Sbjct: 335 QY 336
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
KA L+ + E S+ D + G+ + RL+V ++Q G L+GKGG+ I E
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R+VTG SI++ SD L + +R V ISG + +Y++
Sbjct: 129 IREVTGASIQVASDMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 334
Query: 342 VY 343
Y
Sbjct: 335 QY 336
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
KA L+ + E S+ D + G+ + RL+V ++Q G L+GKGG+ I E
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R+VTG SI++ SD L + +R V ISG + +Y++
Sbjct: 129 IREVTGASIQVASDMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 334
Query: 342 VY 343
Y
Sbjct: 335 QY 336
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
+++ FRI+ +++K+G VIGK G+ I L+ + GA I + + ++R+I +++ E
Sbjct: 91 RDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEE 150
Query: 244 RYSPAQKAVVLVFSRLIE--GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
S A++A++ + + ++E G S + RL++A +Q G L+G G I
Sbjct: 151 ETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIK 210
Query: 302 EMRKVTGTSIRIISDQL---LKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
E+R +G +I+I+ L SE DR+VQISGE S+V A+ ++ LR++
Sbjct: 211 EIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREH 264
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 15/163 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
KA L+ + E S+ D S G+ + RL+V ++Q G L+GKGG+ I E
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 128
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 129 IREVTGASIQVASEMLP---NSTERAVTISGTSEAITQCIYHI 168
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 276 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 334
Query: 342 VY 343
Y
Sbjct: 335 QY 336
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 15/208 (7%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + Q+V FRI+ + ++G VIGK G I+ ++ E A I + + +ER+I +++ E
Sbjct: 65 RAKAQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKE 124
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG---LLVNA-RLVVASNQVGCLLGK 295
+ S A+ A+ + + LI E + S G L N RL++A +Q G L+G
Sbjct: 125 S-DCVVSDAENALKKI-ATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGV 182
Query: 296 GGTIISEMRKVTGTSIRIIS-DQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
G I ++R +G +I +++ +QL C S E+DRVVQISG+ V AV + +LR+N
Sbjct: 183 SGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLREN 242
Query: 353 ------HFSGTLNTARTRSTSSVLTETS 374
S T N A R T + TS
Sbjct: 243 PPKQVISISPTYNYATVRPTQPYVDPTS 270
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGAVIG+ G I+ + E+ A I V P +R + ++A + P++
Sbjct: 114 ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAP 173
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PA ++ V R+ +G + G + RL+V ++Q G L+GK G I ++
Sbjct: 174 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQ 233
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ +RI+ +S +DRVV+I GE V AV + LR
Sbjct: 234 DASKCVLRILESVPPVALS-DDRVVEIQGEPLDVHKAVELIASHLR 278
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 102/181 (56%), Gaps = 6/181 (3%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
+ + +V FRI+ + ++G VIGK G I+ ++ E A I + + +ER+I +++ +
Sbjct: 63 QAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKD 122
Query: 240 GPESRYSPAQKAVVLVFSRLI--EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
E+ + A+KA+ + + ++ +G+S + L + RL++A +Q G L+G G
Sbjct: 123 N-ENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASG 181
Query: 298 TIISEMRKVTGTSIRIIS-DQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I ++R +G SI I++ +QL C S E+DRVVQISG+ V A+ + +LR +
Sbjct: 182 QNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRKTNL 241
Query: 355 S 355
+
Sbjct: 242 A 242
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FRIL KVGA+IG+ G I+ + ++ A I + P ER + ++A + P+ SP
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISP 175
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A ++ + R+ +G+ + + RL+V ++Q G L+GK G I ++ +
Sbjct: 176 AMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ +RI+ + + +DRVV+I GE V AV + LR
Sbjct: 236 KSVVRIVEN-VPPVALNDDRVVEIQGEPLGVHKAVELIANHLR 277
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVG++IG+ G I+ + E A I + P ER + V+A E P+ P
Sbjct: 127 FRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCPIPP 186
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A ++ V ++I D + G V RL+VA Q G L+GK G+ I ++ +
Sbjct: 187 AVDGLLRVHKQVIN-VDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGS 245
Query: 308 GTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR----DNHFSGTLNTAR 362
G +IR++ + L + +D +V+I GE + V AV + LR D G T
Sbjct: 246 GCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQM 305
Query: 363 TRSTSSVLTETSPYSRLKDP 382
S V P+ P
Sbjct: 306 QMSDVRVNQNLPPHQNWGPP 325
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG +IG+ G +I+ E A I V +R++ ++ E E+ SP
Sbjct: 46 FRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSP 105
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGL-LVNARLVVASNQVGCLLGKGGTIISEMRKV 306
A A++ +F R + G SE + ++ G+ L + RL+VAS Q L+GK G+ I +++
Sbjct: 106 AMDAILRIFKR-VSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQEN 164
Query: 307 TGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
TG IR++S D+L ++R++ + GE KV A+ V G LR
Sbjct: 165 TGAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLR 209
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 89/160 (55%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TV+ S
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSGSR------ 73
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S KA L+ + E S+ + ++ + RL+V ++Q G L+GKGG+ I E+R+
Sbjct: 74 SAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIRE 133
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+TG SI++ S+ L + +R V +SG + +Y++
Sbjct: 134 ITGCSIQVASEMLP---NSTERAVTLSGSAEAITQCIYHI 170
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V ++ +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 290 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEERDSGNTDRTITITGNPDSVALA 348
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 349 QYLINMRI 356
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVK 339
RL+V ++++GCL+GKGG I++EMR++T +IRI+S + L K SE+D +VQISG+ K
Sbjct: 9 RLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLDVAK 68
Query: 340 DAVYNVTGRLRDNHF 354
DA+ V RLR N F
Sbjct: 69 DALMQVVTRLRANLF 83
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGAVIG+ G I+ + E+ A I V P ER + ++A + P++
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 245 YSPAQKAVVLVFSRLIEG---TSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
PA ++ V R+ +G +++ + N G RL+V ++Q G L+GK G I
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTG---PTRLLVPASQAGSLIGKQGATIK 222
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++ + +RI+ + + +DRVV+I GE AV + LR
Sbjct: 223 SIQDASKCVLRIV-ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT S
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGST------ 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
+ KA L+ + E S+ S G+ + RL+V ++Q G L+GKGG+ I E
Sbjct: 67 NAIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 126
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 127 IREVTGASIQVASEMLP---NSTERAVTISGTGEAITQCIYHI 166
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 323 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCDDRESGVTDRTITISGNPDAVALA 381
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 382 QYLINMRI 389
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 7/169 (4%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ L E A + V ER++ V+ E P P
Sbjct: 49 FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPP 108
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGL---LVNARLVVASNQVGCLLGKGGTIISEMR 304
A A++ VF R + G ++ D ++ + ARL+V Q L+GK G I ++
Sbjct: 109 AMDALIRVFKR-VNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQ 167
Query: 305 KVTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ TG +IR+IS D+ + +++++R+V+I GE KV A+ V+ LR
Sbjct: 168 EGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLR 216
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 6/168 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ L E A + V ER++ V+ E P P
Sbjct: 58 FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPP 117
Query: 248 AQKAVVLVFSRL--IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A A++ VF R+ I + +G ++ G+ ARL+V Q L+GK G I +++
Sbjct: 118 AMDALMRVFKRVSGITDGAAEGTQAATAPGVCA-ARLLVPGAQAINLIGKQGASIKAIQE 176
Query: 306 VTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
TG +IR+IS D+ + + E++R+V+I GE KV A+ V+ LR
Sbjct: 177 GTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLR 224
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ L E A + + ER++ V+ E P P
Sbjct: 52 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELPP 111
Query: 248 AQKAVVLVFSRLI---EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
A A++ VF R+I +G +E G ++ G+ ARL+V Q L+GK G I ++
Sbjct: 112 AMDALMRVFKRVIGITDGAAE-GTQAAATPGVCA-ARLLVPGAQAINLIGKQGATIKAIQ 169
Query: 305 KVTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ TG +IR+IS D+ + +++++R+++I G+ KV A+ V+ LR
Sbjct: 170 ESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLR 218
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 14/173 (8%)
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVV 253
+ +VG++IGK G I+ ++ ++GA I++ C ER++T+T S G KA +
Sbjct: 10 HKEVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSTGT------INKAFI 61
Query: 254 LVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
++ ++L + + L S K + RL+V + Q GC++GKGG+ I E+R+ TG SI++
Sbjct: 62 MICAKLQQDL--QALPNSIPKPP-ITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQV 118
Query: 314 ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRST 366
S+ L S +R V ISG + D + N+ L + G R + T
Sbjct: 119 ASEMLP---SSTERAVTISGSADSIVDCMRNICQILLEAPAKGNTLPYRPKPT 168
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
+R++ KVG++IG+ G +++ + + GA I V +R++ ++ E P+++ SP
Sbjct: 56 YRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVSP 115
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A AV VF R + G ++ + +L++AS+Q L+G+ G+ I E+++ +
Sbjct: 116 AMDAVFRVFKR-VAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQERS 174
Query: 308 GTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
G S+R++S D ++ + ++R+V+I GE KV DA V +LR
Sbjct: 175 GASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLR 218
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 40/275 (14%)
Query: 72 HDTIARP-VEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAV 130
H T++ P P+ WRS+ ++P + RS E + T RL+G
Sbjct: 26 HRTVSGPGTGGCPR---WRSMTKHGSVHWQKPRRFLKEWTEERSPEVFAKSTCERLYGGQ 82
Query: 131 SQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRI 190
+Q I+ V T P+ L E++ TL + R+
Sbjct: 83 AQ-------TSIMGTLAKVKLTGPTGG---------LDEENELNVTL---------TIRL 117
Query: 191 LCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQK 250
L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP + K
Sbjct: 118 LMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAIF---K 169
Query: 251 AVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
A ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+ TG
Sbjct: 170 AFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQ 229
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+++ D L + +R + I+G V + V +
Sbjct: 230 VQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 261
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 347 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 406
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 407 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 446
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ LV RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V ++ + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKHICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ L A + + ER++ V+ E P SP
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 248 AQKAVVLVFSRLI---EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
A A++ VF R+I +G +E G ++ G+ ARL+V Q L+GK G I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAE-GTQAAATPGVCA-ARLLVPGAQAINLIGKQGATIKAIQ 159
Query: 305 KVTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ TG +IR+IS D+ + +++++R+V+I G+ KV A+ V+ LR
Sbjct: 160 ESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 208
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGAVIG+ G I+ + E+ A I V P ER + ++A + P++
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 245 YSPAQKAVVLVFSRLIEG---TSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
PA ++ V R+ +G +++ + N G RL+V ++Q G L+GK G I
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGP---TRLLVPASQAGSLIGKQGATIK 222
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++ + +RI+ + + +DRVV+I GE AV + LR
Sbjct: 223 SIQDASKCVLRIV-ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FRIL KVGAVIG+ G I+ + E+ A I V P ER + ++A + P++
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 245 YSPAQKAVVLVFSRLIEG---TSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
PA ++ V R+ +G +++ + N G RL+V ++Q G L+GK G I
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGP---TRLLVPASQAGSLIGKQGATIK 222
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++ + +RI+ + + +DRVV+I GE AV + LR
Sbjct: 223 SIQDASKCVLRIV-ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLR 270
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 22/166 (13%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTN-- 67
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL------VNARLVVASNQVGCLLGKGGTI 299
A+ FS LI E+ + S G + + RL+V ++Q G L+GKGG+
Sbjct: 68 -----AIFKAFS-LICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSK 121
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
I E+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 122 IKEIREVTGASIQVASEMLP---NSTERAVTISGTSEAITQCIYHI 164
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ L A + + ER++ V+ E P SP
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 248 AQKAVVLVFSRLI---EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
A A++ VF R+I +G +E G ++ G+ ARL+V Q L+GK G I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAE-GTQAAATPGVCA-ARLLVPGAQAINLIGKQGATIKAIQ 159
Query: 305 KVTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ TG +IR+IS D+ + +++++R+V+I G+ KV A+ V+ LR
Sbjct: 160 ESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 208
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 18/180 (10%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV---GATMP--ECDERLIT 234
R + + RIL + + +IGK GT I+ L+S+ A I V A+ P C
Sbjct: 136 RKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDN 195
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
S P+ S A +A++L+ ++ + + V+ RL+V +GC++G
Sbjct: 196 FIMS--PDDLKSMAVEAILLLQGKINDEDDD-----------TVSIRLLVPCKVIGCIIG 242
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
K G+II+E+R+ T IRI Q KC +D +V++ GE V+DA+ + RLRD+
Sbjct: 243 KSGSIINEIRRRTKADIRISKGQKPKCADSSDELVEVLGEVGSVRDALVQIVLRLRDDAL 302
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 173 RVATLDARTQQQE-VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDER 231
RV D R E V++RILC ++ +G+VIGK G +I +++ E A + V P ++R
Sbjct: 25 RVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDR 84
Query: 232 LIT----VTASEGPE--------SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
+IT V E E + AQ A++ V S + S LD
Sbjct: 85 VITIYCYVKKKEDVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSV-LDSDRKMKDKEE 143
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII----SDQLLKCISENDRVVQISGEF 335
R++V S+Q ++GK GT I ++R T +I++ SD C + D + +
Sbjct: 144 CRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDNFIMSPDDL 203
Query: 336 -SKVKDAVYNVTGRLRD 351
S +A+ + G++ D
Sbjct: 204 KSMAVEAILLLQGKIND 220
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 20/164 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT S
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGST------ 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ LI E+ D +S + + RL+V ++Q G L+GKGG+ I
Sbjct: 69 ----NAIFKAFT-LICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIK 123
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 124 EIREVTGASIQVASEMLP---NSTERAVTISGTGEAITQCIYHI 164
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 270 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCDDRESGVTDRTITISGNPDAVALA 328
Query: 342 VY 343
Y
Sbjct: 329 QY 330
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVGA+IG+ G ++ + E + I + +P ER++ V+A E PE+ SP
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 248 AQKAVVLVFSRLIEGTSEKG--LDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A ++ V R+ EG+S G ++ LV +RL+V + Q G L+G+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR---------- 160
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++L C +DR+V++ GE KV+ A+ V LR
Sbjct: 161 ---------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLR 196
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG +IG+ G I+ + E A + + P +R + ++A E P S
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 105
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PA ++ V R+I+G S V+ +L+V ++Q G L+GK G + ++
Sbjct: 106 VPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 165
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ G+ + V A+ + LR
Sbjct: 166 EASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLR 212
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVGA+IG+ G ++ + E + I + +P ER++ V+A E PE+ SP
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 248 AQKAVVLVFSRLIEGTSEKG--LDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A ++ V R+ EG+S G ++ LV +RL+V + Q G L+G+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIGR---------- 160
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++L C +DR+V++ GE KV+ A+ V LR
Sbjct: 161 ---------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLR 196
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFG-VHSSVAVSHDFSQPPL 402
+SS + YS D ASF S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFG-VHSSVAVSHDFSQPPL 402
+SS + YS D ASF S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVG +IG G +R L E A + + E+ + + E PE P
Sbjct: 57 FRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPEEPLPP 116
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A A++ V+ + I +++ LD S+ G++V R++V S Q L+G+ G +I+ + + +
Sbjct: 117 AMDALLRVYQQTI---NDESLDVGSD-GVIVR-RILVPSEQAESLIGEHGVMINSIMEAS 171
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
T IR++ L E DRVV+I G ++V A+ V LR
Sbjct: 172 QTDIRVLDGDLPPVALEEDRVVEIWGLPARVHKALELVASHLR 214
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 98/173 (56%), Gaps = 15/173 (8%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD----ERLITVTASEGPE- 242
+R+LC N + G+VIGK G ++ LQ ++GA I V P D ER+I + A + +
Sbjct: 267 YRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKV---EPPVDSTIAERVIAIEAQDVDDP 323
Query: 243 SRYSPAQKAVVLVFSRLI---EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
+ ++P+Q A++ + ++ E + G +N +++ RL++ S+Q+ ++G+ G +
Sbjct: 324 TVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVI--RLLLPSSQIRNVIGRFGNV 381
Query: 300 ISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGE-FSKVKDAVYNVTGRLR 350
I +R +G+ +R++ S + +C ND V+QIS E V A+ +T +LR
Sbjct: 382 IERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLR 434
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
E FR+L KVG +IG+ G I+ + E A + + P +R + ++A E P S
Sbjct: 43 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 102
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PA ++ + R+I+G S V+ +L+V ++Q G L+GK G + ++
Sbjct: 103 VPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 162
Query: 305 KVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +R++ + L + ++DRVV++ G+ + V A+ + LR
Sbjct: 163 EASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLR 209
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 80
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 81 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 137
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 138 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 194
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 195 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 235
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 288 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 340
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 341 RQVTITGSAASISLAQYLINVRL 363
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S++++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMSLNPDLEGPPL 223
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 22/182 (12%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R+++ + R+L + G++IGKGG I L+S+ A I T+P+C ER++T+++
Sbjct: 15 RSRRGDEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----TVPDCPGPERMLTLSS 70
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ + + ++ E G + N+ ++ R+++ +Q GC++GK G
Sbjct: 71 D----------LDTICNIVTDVVPNLEENGGRVNGNE---LDLRMMIHQSQAGCVIGKAG 117
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I E+R+ TG I+I S+ + DR++QI GE SK D++ + ++ N G
Sbjct: 118 YKIKELREKTGARIKIFSNVAPQST---DRIIQIVGEPSKCVDSIREIITLIKSNPIKGI 174
Query: 358 LN 359
+N
Sbjct: 175 VN 176
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 276 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 328
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 329 RQVTITGSAASISLAQYLINVRL 351
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 277 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 329
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 330 RQVTITGSAASISLAQYLINVRL 352
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + Q+V FRI+ + ++G VIGK G I+ ++ A I + + +ER+I +++ +
Sbjct: 94 RAKGQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKD 153
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA---RLVVASNQVGCLLGKG 296
E + A+KA+ + + LI D S V A RL++A +Q G L+G
Sbjct: 154 NDE-MVTDAEKALEQI-ANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMS 211
Query: 297 GTIISEMRKVTGTSIRIIS-DQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTGRLR 350
G I ++R +G I +++ QL C S E+DRVVQ+SG+ S V A+ + +LR
Sbjct: 212 GQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLR 268
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 13/185 (7%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R + +V FRI+ + K+G VIGK G I+ ++ + A I + + +ER+I +++ E
Sbjct: 45 RQARADVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKE 104
Query: 240 GPESRYSPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNA--------RLVVASNQVG 290
E+ + A+ A+ + ++ E G LVNA RL++A +Q G
Sbjct: 105 N-ENGATDAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQAG 163
Query: 291 CLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCIS--ENDRVVQISGEFSKVKDAVYNVTG 347
L+G G I ++R +G I +++ +QL C S E+DRVVQISG+ V A+ +
Sbjct: 164 SLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGC 223
Query: 348 RLRDN 352
+LR+N
Sbjct: 224 QLREN 228
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 14/220 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ T+ S
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPKGVTIPYRPKPS 182
Query: 366 TSSVLTETSP--YSRLKDPASFG-VHSSVAVSHDFSQPPL 402
+S V+ YS D ASF S+ ++ D PPL
Sbjct: 183 SSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 222
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL--------VNARLVVASNQVGCLLGKGG 297
KA L+ + E S+ D + RL+V ++Q G L+GKGG
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGG 128
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+ I E+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 129 SKIKEIREVTGASIQVASEMLP---NSTERAVTISGTSEAITQCIYHI 173
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 375 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 433
Query: 342 VYNVTGR 348
Y + R
Sbjct: 434 QYLINMR 440
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL--------VNARLVVASNQVGCLLGKGG 297
KA L+ + E S+ D + + RL+V ++Q G L+GKGG
Sbjct: 73 F---KAFTLICKKFEEWCSQF-HDVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGG 128
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+ I E+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 129 SKIKEIREVTGASIQVASEML---PNSTERAVTISGTSEAITQCIYHI 173
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 375 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 433
Query: 342 VY 343
Y
Sbjct: 434 QY 435
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 17/222 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
+SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 SSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 223
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 264 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 316
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 317 RQVTITGSAASISLAQYLINVRL 339
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 14/171 (8%)
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
+VG++IGK G I+ ++ ++GA I++ C ER++T+T S G KA ++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSIGT------INKAFGMI 52
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
++L + + L S K + RL+V + Q GC++GKGGT I E+R+ TG SI++ S
Sbjct: 53 CAKLQQ--DLQALPNSIPKPP-ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVAS 109
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRST 366
+ L S +R V ISG + D + N+ L + G R + T
Sbjct: 110 EMLP---SSTERAVTISGSADSIVDCMRNICQILLEAPPKGNTLPYRPKPT 157
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM-PECDERLITVTAS 238
++ R++ + G +IGKGGT I+ ++ GA I V + M P ER +T++ S
Sbjct: 72 ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERAVTISGS 125
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ + R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 36 KEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 94
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ +L+ +G +F+ + RLVV +N G ++GKGG
Sbjct: 95 -----LFGEVMKAMELILEKLL----AEGEEFNEAEA-RPKVRLVVPNNSCGGIIGKGGA 144
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V ++G F +A+ + +L D H+
Sbjct: 145 TIKSFIEESHAGIK-ISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPAN 203
Query: 358 LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSSSEG 413
L++ PY+ L P+ + V V + Q P N+ + G
Sbjct: 204 LSSP------------FPYAGLTFPS----YPGVPVGYMIPQVPYNNAVNYGPNNG 243
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTA 237
++++ R L SN G+VIGKGG+ I QS++GA I + P +R+I V+
Sbjct: 31 SEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG 90
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ + Q+AV L+ S+L+ SE + ++ RLVV + G ++GKGG
Sbjct: 91 A------INEIQRAVELILSKLL---SELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGG 141
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSG 356
I + + I+ IS Q +NDR+V ++G F + A+ + +L D H++
Sbjct: 142 ATIRSFIEDSQAGIK-ISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQ 200
Query: 357 TLNT 360
++N+
Sbjct: 201 SMNS 204
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD---ERLITVTASEGPESR 244
FR++ DKVG +IG+ G I+ L E A + V P D R++ V+A E E+
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA------RLVVASNQVGCLLGKGGT 298
SPA A + +F + E D +S+ L+ A RL+V Q ++GK G
Sbjct: 159 LSPAMNAAIKIFKHINEIE-----DINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGV 213
Query: 299 IISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
I +++ TG+++RI+ D+LL + +R+V+I+G +V +A+ V G LR
Sbjct: 214 TIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLR 266
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD---ERLITVTASEGPESR 244
FR++ DKVG +IG+ G I+ L E A + V P D R++ V+A E E+
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA------RLVVASNQVGCLLGKGGT 298
SPA A + +F + E D +S+ L+ A RL+V Q ++GK G
Sbjct: 159 LSPAMNAAIKIFKHINEIE-----DINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGV 213
Query: 299 IISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
I +++ TG+++RI+ D+LL + +R+V+I+G +V +A+ V G LR
Sbjct: 214 TIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLR 266
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL--------VNARLVVASNQVGCLLGKGG 297
KA L+ + E S+ D + RL+V ++Q G L+GKGG
Sbjct: 70 F---KAFTLICKKFEEWCSQF-HDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGG 125
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+ I E+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 126 SKIKEIREVTGASIQVASEMLP---NSTERAVTISGTSEAITQCIYHI 170
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 278 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 336
Query: 342 VY 343
Y
Sbjct: 337 QY 338
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 87/163 (53%), Gaps = 18/163 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V+ R++ + G++IGK G ++ + ++GA I++ + C ER++TVT +
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTGTT------ 53
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
+ F+ + + E ++ ++ L V RL+V ++Q G L+GKGG I E
Sbjct: 54 ----DQIFKAFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKE 109
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+R++TG SI++ S+ L + +R V +SG+ + +YN+
Sbjct: 110 IRELTGASIQVASEMLP---NSTERAVTVSGQADAITQCIYNI 149
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEFSKVKD 340
+ + ++ +GC++G+GG I+E+R+++G +I+I +D+ +DR V I G +
Sbjct: 271 MTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADE-----GSSDRKVTIMGSLETIHA 325
Query: 341 AVYNVTGR 348
A Y + R
Sbjct: 326 AQYMINAR 333
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD---ERLITVTASEGPESR 244
FR++ DKVG +IG+ G I+ L E A + V P D R++ V+A E E+
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA------RLVVASNQVGCLLGKGGT 298
SPA A + +F + E D +S+ L+ A RL+V Q ++GK G
Sbjct: 159 LSPAMNAAIKIFKHINEIE-----DINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGV 213
Query: 299 IISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
I +++ TG+++RI+ D+LL + +R+V+I+G +V +A+ V G LR
Sbjct: 214 TIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLR 266
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 21/169 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I++ + E+GA I++ C ER++TVT GP +
Sbjct: 20 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GPTNSI 74
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---------VNARLVVASNQVGCLLGKG 296
KA L+ + E S+ D + RL+V ++Q G L+GKG
Sbjct: 75 F---KAFTLICKKFEEWCSQF-HDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKG 130
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
G+ I E+R+VTG SI++ S+ L + +R V ISG + +Y++
Sbjct: 131 GSKIKEIREVTGASIQVASEMLP---NSTERAVTISGTSEAITQCIYHI 176
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 284 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGPTDRTITITGNPDSVALA 342
Query: 342 VY 343
Y
Sbjct: 343 QY 344
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 230 ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE---KGLDFSSNKGLLVNARLVVAS 286
+R++ ++ E PE+ SPA AV+ VF R + G SE G + + + RL+VAS
Sbjct: 20 DRIVLISGREEPEAPLSPAMDAVIRVFKR-VTGLSESEGDGKAYGAAGVAFCSIRLLVAS 78
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNV 345
Q L+GK G++I +++ TG S+R++S D++ + ++R+V++ GE KV+ A+ V
Sbjct: 79 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAV 138
Query: 346 TGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQP 400
G LR ++ R+ ++ +++ D + S + D+S P
Sbjct: 139 VGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSLP 193
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 35/179 (19%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ C ER++TVT S
Sbjct: 74 LTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGS------- 124
Query: 246 SPAQKAVVLVFSRLIEGTSEKGL---------------DFSSNKGLL----VNARLVVAS 286
+A++ FS LI E+ L + SN L V RL+V +
Sbjct: 125 ---TEAILKAFS-LIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPA 180
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+Q G L+GKGG+ I E+R+VTG SI++ S+ L + +R V +SG + +Y +
Sbjct: 181 SQCGSLIGKGGSKIKEIREVTGASIQVASEML---PNSTERAVTVSGTAEAITKCIYQI 236
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ + ++ +GC++GKGG+ I+E+R+++G +I+I + + DR V ISG + A
Sbjct: 337 MTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE----GSKDRTVTISGTPEAINLA 392
Query: 342 VYNVTGRLRDNHFSGTLNTARTRSTS 367
Y + + + H + TL+ + T S
Sbjct: 393 QYLINTSM-ELHKNLTLDLSATHPAS 417
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 16/173 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFI-----SVGATMPECDERLITVTASEGPE 242
FR++ KVG++IG+ G +I+ L E A + VGAT ER++ V+ E P+
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGAT-----ERIVLVSGKEDPD 102
Query: 243 SRYSPAQKAVVLVFSRL--IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PA A++ VF R+ I + +G ++ + ARL+V Q L+GK G I
Sbjct: 103 LELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCA-ARLLVPGAQAINLIGKQGATI 161
Query: 301 SEMRKVTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+++ T +IR+IS D+ + +++++R+V+I G+ KV A+ V+ LR
Sbjct: 162 KAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 14/184 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTA 237
++++ R L SN G+VIGKGG+ I QS++GA I + P +R+I V+
Sbjct: 31 SEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSG 90
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ + Q+AV L+ S+L+ SE + ++ RLVV + G ++GKGG
Sbjct: 91 A------INEIQRAVELILSKLL---SELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGG 141
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSG 356
I + + I+ IS Q +NDR+V ++G F + A+ + +L D H++
Sbjct: 142 VTIRSFIEDSQAGIK-ISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQ 200
Query: 357 TLNT 360
++N+
Sbjct: 201 SMNS 204
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 69 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
EMR+ TG +++ D L + +R V ISG
Sbjct: 124 EMRESTGAQVQVAGDMLP---NSTERAVTISG 152
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGT 153
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 177 LDARTQQQE---VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
+DA+++ ++ R++ +VG++IGK G I++ + E+GA I++ C ER++
Sbjct: 1 MDAKSKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIV 58
Query: 234 TVTASEGPESRYSPAQKAVVLVFSR---LIEGTSEK-GLDFSSNKGLLVNARLVVASNQV 289
T++ S E+ Y KA L+ ++ IE + K G G+ + RL+V ++Q
Sbjct: 59 TISGST--EAIY----KAFSLICTKVEEFIEMQNGKTGATAIGKCGMTL--RLIVPASQC 110
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
G L+GKGG I E+R+ TG I++ SD L + +R V ++G + ++++
Sbjct: 111 GSLIGKGGNKIKEIREATGAQIQVASDVLPQ---STERAVTLTGTRDSITQCIFHI 163
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
P + ++PA A L S+L S ++ S G + + V ++ +GC++GKGGT I
Sbjct: 279 PANSFNPAALAA-LAGSQLRSNGSGANINSRSGGGQQTH-EMTVPNDLIGCIIGKGGTKI 336
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
+E+R+++G IRI + + + + DR + I+G V A Y
Sbjct: 337 AEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQY 379
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 16/173 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFI-----SVGATMPECDERLITVTASEGPE 242
FR++ KVG++IG+ G +I+ L E A + VGAT ER++ V+ E P+
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGAT-----ERIVLVSGKEDPD 102
Query: 243 SRYSPAQKAVVLVFSRL--IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PA A++ VF R+ I + +G ++ + ARL+V Q L+GK G I
Sbjct: 103 LELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCA-ARLLVPGAQAINLIGKQGATI 161
Query: 301 SEMRKVTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+++ T +IR+IS D+ + +++++R+V+I G+ KV A+ V+ LR
Sbjct: 162 KAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDTI 70
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I EMR+
Sbjct: 71 F---KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R V ISG + V + + ++ G R +
Sbjct: 128 STGAQVQVAGDMLP---NSTERAVTISGTPEAIIQCVRQICVVMLESPPKGATIPYRPKP 184
Query: 366 TSS 368
TS+
Sbjct: 185 TST 187
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVRQICVVMLESPPKGATIPY 180
Query: 246 SPAQKAVVLVFS----RLIEG------------------------------TSEKGLDFS 271
P + ++FS I+G + GLD S
Sbjct: 181 RPKPTSTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDAS 240
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 241 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME----GSSERQITI 293
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 294 TGTPANISLAQYLINARL 311
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS--EGPESR 244
++RILC + K G VIGK GTII++++ GA+I+V +P ER+I ++ + P+ R
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDGR 128
Query: 245 ---YSPAQKAVVLVFSRLIEGTSEKGL---------DF--SSNKGLLVNARLVVASNQVG 290
+SPAQ+A+ V R++E ++ G D+ G V RLVV+ VG
Sbjct: 129 MPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVG 188
Query: 291 CLL 293
CLL
Sbjct: 189 CLL 191
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 13/218 (5%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHS--SVAVSHDFSQPP 401
+SS + R ++ H+ S+ ++ D PP
Sbjct: 183 SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 275 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 327
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 328 RQVTITGSAASISLAQYLINVRL 350
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 17/221 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD--NHFSGTLNTART 363
TG +++ D L + +R + I+G + + V + + + L
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLEVSPQAPPKLQCIPW 182
Query: 364 RSTSSVLTETSPYSRLKDPASFGVHS--SVAVSHDFSQPPL 402
R SS+ + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 RLKSSIYPQDR-YSTGSDSASF-PHTTPSMCLNPDLEGPPL 221
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 275 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 327
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 328 RQVTITGSAASISLAQYLINVRL 350
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R +Q + R+L + G++IGKGG I L+S+ A I V P+C ER++T+++
Sbjct: 41 RYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV----PDCPGPERVLTISS 96
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
V+ V + ++ E G S++ ++ R++V +Q GC++GKGG
Sbjct: 97 D----------LPTVLQVLNEVVPNLEENGSRHGSDE---IDVRMLVHQSQAGCIIGKGG 143
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I E+R+ TG I+I S C DR++ I G+ S D + + ++ + G
Sbjct: 144 LKIKELREKTGARIKIYSHC---CPHSTDRLISICGKPSTCIDCIRELIATIKTSPLKGM 200
Query: 358 LN 359
N
Sbjct: 201 NN 202
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
+ S ++ D GA+IGKGG IR ++S++GA I++ +P ++R+IT+T
Sbjct: 384 NKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITITG 437
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 177 LDARTQQQEV----SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
+DAR + E+ + R+L +VG++IGK G + + E+GA I++ + C ER+
Sbjct: 1 MDARVTESELNATLTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINI--SEGNCPERI 58
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
IT+T GP + KA V++ +L E + + ++ V RLVV + Q G L
Sbjct: 59 ITLT---GPTNAIF---KAFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSL 112
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+GKGG I E+R+ TG +++ D L + +R + I+G V + V +
Sbjct: 113 IGKGGCKIKEIRESTGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTIT---GPTDAI 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A + L F I + S V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPP---VTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 129 STGAQVQVAGDMLP---NSTERAVTISG 153
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I ++ L E D A++ T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 122 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 154
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHS--SVAVSHDFSQPP 401
+SS + R ++ H+ S+ ++ D PP
Sbjct: 183 SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ + R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 36 KEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 94
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ +L+ +G +F+ + RLVV ++ G ++GKGG
Sbjct: 95 -----LFGEVMKAMELILEKLL----AEGEEFNEAEA-RPKVRLVVPNSSCGGIIGKGGA 144
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V ++G F +A+ + +L D H+
Sbjct: 145 TIKSFIEESHAGIK-ISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPAN 203
Query: 358 LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSSSEG 413
L++ PY+ L P+ + V V + Q P N+ + G
Sbjct: 204 LSSP------------FPYAGLTFPS----YPGVPVGYMIPQVPYNNAVNYGPNNG 243
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTIT---GPTDAI 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A + L F I + + S V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 72 FKAFSMIALKFEEDINASMT---NSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 129 STGAQVQVAGDMLP---NSTERAVTISG 153
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I ++ L E D A++ + T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 122 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 154
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHS--SVAVSHDFSQPP 401
+SS + R ++ H+ S+ ++ D PP
Sbjct: 183 SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
>gi|242093092|ref|XP_002437036.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
gi|241915259|gb|EER88403.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
Length = 319
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 94/184 (51%), Gaps = 25/184 (13%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-TVTAS----EGP 241
SFRILC K G + ++ E+GAF++V R+I TV + +G
Sbjct: 90 SFRILCPECKA---YGFPPGFVAKVRDESGAFVTVHPPFAGDYVRIIETVDGARREADGR 146
Query: 242 ESRYSPAQKAVVLVFSRLIE----------GTSEKGLDFSSNKGLLVNARLVVASNQVGC 291
+SPAQ+A+++V R++E +G D ++G RL+V VGC
Sbjct: 147 PPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKD-PRDRGK-TTTRLIVPKLHVGC 204
Query: 292 LLGKGGTIISEMRKVTGTSIRII-SDQLL-KCISENDRVVQISGEFSKVKD--AVYNVTG 347
LLGKGG II +MR T T IRI+ DQ +C+S ++ VVQ S EF + + V+N
Sbjct: 205 LLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ-SLEFLRKMNIWVVFNRCL 263
Query: 348 RLRD 351
+R+
Sbjct: 264 HMRN 267
>gi|291221774|ref|XP_002730893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Saccoglossus kowalevskii]
Length = 437
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 21/151 (13%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPE 242
+V RIL + GA+IGKGG I L+++ A ++V P+C ER++TVT ++
Sbjct: 47 KVDLRILLQSKNAGAIIGKGGNNIHRLRTQYNATVTV----PDCSGPERILTVTTNQ--- 99
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
A ++ V L E K LDF R++V +Q G ++G+ G I E
Sbjct: 100 ---ETALSCLLDVIPVLEEYQQYKDLDFD------CEMRMLVHQSQAGAIIGRAGFKIKE 150
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+R+ TG +I++ S+ C + +RVVQ++G
Sbjct: 151 LREQTGANIKVYSE---VCPNSTERVVQMNG 178
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 265 EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISE 324
+ G+D N ++ + + G ++GKGG+ I ++R+ +G I+I D+ L
Sbjct: 342 DSGMDQQYNTSQFTTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKI--DEPLP--GS 397
Query: 325 NDRVVQISGEFSKVKDAVYNVTGRLR 350
NDR++ I G ++++A Y + R+R
Sbjct: 398 NDRIITIKGTPEQIQNAQYLLQNRVR 423
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVL 254
D G++IGKGG+ I ++ ++GA I + +P ++R+IT+ + PE Q A L
Sbjct: 364 DLAGSIIGKGGSRIGQIREDSGALIKIDEPLPGSNDRIITIKGT--PEQ----IQNAQYL 417
Query: 255 VFSRL 259
+ +R+
Sbjct: 418 LQNRV 422
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTIT---GPTDAI 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A + L F I + S V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPP---VTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 129 STGAQVQVAGDMLP---NSTERAVTISG 153
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I ++ L E D A++ T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 122 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 154
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 228
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 229 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 285
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 286 STGAQVQVAGDML---PNSTERAITIAGVPQSVTECVKQI 322
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 408 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 467
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 468 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 507
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 34/217 (15%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGA--FISVGATMPECDERLITVTASEGPE 242
++ RIL +VG VIGKGG ++ ++ ++GA IS G+T ER++T+T +
Sbjct: 20 NLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGST----PERIVTITGTT--- 72
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+ KA L+ ++ E + D++ K L +L+V ++Q G ++GKGG I E
Sbjct: 73 ---NAICKATELIGLKVEEFFERQNGDWNGPKAPLT-FKLIVPASQCGFIIGKGGCKIKE 128
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
+R+ +G +I++ SD L + +R+V I+G + VY V L D
Sbjct: 129 IRESSGAAIQVASDMLP---NSTERLVSITGTTGTISQCVYQVCNVLLD----------- 174
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQ 399
S + T PY + F +S AV +DF +
Sbjct: 175 ----SPPRSATIPYDPRSKTSGF---ASSAVGNDFGR 204
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 32/227 (14%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKI--LEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + S+ LV RLVV + Q G L+GKGG I E+RK
Sbjct: 69 F---KAFAMIIYKLEEDINSS-MTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRK 124
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G V V + + + TL+ +
Sbjct: 125 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTKCVKQICLVMLE-----TLSHSPQGK 176
Query: 366 TSSVLTETSP----------YSRLKDPASFGVHSSVAVSHDFSQPPL 402
++L + P R D A + H+ +HD PPL
Sbjct: 177 VKTILYQPMPSRSPVTCAGGQDRCSDAAGY-PHA----THDLEGPPL 218
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLL--------VNARLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ GT I+E+R+
Sbjct: 247 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQITHELTIPNNLIGCIIGRQGTNINEIRQ 306
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 307 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLIKARL 346
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A+LDA TQ ++ + N+ +G +IG+ GT I ++ +GA I + + R +T
Sbjct: 271 ASLDASTQ---ITHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVT 327
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSN 273
+T G + S AQ L+ +RL +SEKG+ S N
Sbjct: 328 IT---GSAASISLAQ---YLIKARL---SSEKGMGCSWN 357
>gi|226504964|ref|NP_001141009.1| uncharacterized protein LOC100273088 [Zea mays]
gi|194702154|gb|ACF85161.1| unknown [Zea mays]
Length = 221
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ + R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 36 KEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 94
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ +L+ +G +F+ + RLVV ++ G ++GKGG
Sbjct: 95 -----LFGEVMKAMELILEKLLAELLYQGEEFNEAEA-RPKVRLVVPNSSCGGIIGKGGA 148
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V ++G F +A+ + +L D H+
Sbjct: 149 TIKSFIEESHAGIK-ISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPAN 207
Query: 358 LNT 360
L++
Sbjct: 208 LSS 210
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 13/218 (5%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHS--SVAVSHDFSQPP 401
+SS + R ++ H+ S+ ++ D PP
Sbjct: 183 SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 262 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 314
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 315 RQVTITGSAASISLAQYLINVRL 337
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTIT---GPTDAI 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A + L F I + S V RLV+ ++Q G L+GKGG+ I E+R+
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPP---VTLRLVIPASQCGSLIGKGGSKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 129 STGAQVQVAGDMLP---NSTERAVTISG 153
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I ++ L E D A++ T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 122 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 154
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT GP
Sbjct: 41 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT---GP- 96
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+A LV L+EG + G+ N RL+++ NQ+G ++G+ G I
Sbjct: 97 --LQGTARAYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKH 154
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT----L 358
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 155 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 211
Query: 359 NTA-----------RTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSH-------DFSQP 400
N A T +T+S + PY+R + A F S S + P
Sbjct: 212 NPAVRASVGTGSSINTNTTASNGYNSRPYNRTGNGADFSDGQSAGYSRRSNPDTSNRGYP 271
Query: 401 PLTQDG 406
+T+DG
Sbjct: 272 LVTEDG 277
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 97/179 (54%), Gaps = 21/179 (11%)
Query: 174 VATLDARTQQQE-----VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC 228
+AT+D++ + ++ R+L + +VG++IGK G I++ + E+GA I++ C
Sbjct: 1 MATVDSKGLPHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDG--SC 58
Query: 229 DERLITVTASEGPESRYSPAQKAVVLVFSRLIE--GTSEKGLDFSSNKGLLVNARLVVAS 286
ER++T+T + ++ + KA L+ +L E G G + RL++ +
Sbjct: 59 PERIVTITGTT--DAIF----KAFNLICKKLEEEVGGPLAGTAIPRPP---ITLRLIMPA 109
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+Q G L+GKGG+ I E+R++TG S+ + S+ L + +R V +SG + +Y++
Sbjct: 110 SQCGSLIGKGGSKIKEIREITGASVVVASEMLP---NSTERAVTVSGTSDAITQCIYHI 165
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IRI + + + S ++R + I+G V A
Sbjct: 273 MAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRE--SSSERTITITGTAESVALA 330
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 331 QYLINTRL 338
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 321
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 322 QYLINARL 329
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 112/221 (50%), Gaps = 17/221 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ LV RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V ++ + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKHICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAVSHDFS--QPPLTQ 404
+SS + ++ +D S G + + ++ QP LT+
Sbjct: 183 SSSPVI----FAGGQDRYSTGSDKAYTIQGQYAIPQPDLTK 219
>gi|321455064|gb|EFX66209.1| hypothetical protein DAPPUDRAFT_332423 [Daphnia pulex]
Length = 384
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 90/179 (50%), Gaps = 21/179 (11%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPE 242
+ R+L + G++IGKGG+ I L++E A I +P+C ER++T+ +
Sbjct: 32 DTELRLLVYSKVAGSIIGKGGSNISKLRTENHATI----LLPDCPGPERILTIQGN---- 83
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL--VNARLVVASNQVGCLLGKGGTII 300
AV+ V ++ E G + +ARL+V +Q+GC++G+GG +
Sbjct: 84 ------LDAVINVLQNVLPSLEEVSKIRGERTGRVGDSDARLLVHQSQIGCIIGRGGAKV 137
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLN 359
E+R+ TGT I + S + C DR+VQI G+ S + + + ++++ G ++
Sbjct: 138 KELRESTGTRITVYS---VCCPRSTDRIVQILGKPSDCGECIKQIIALVKESQVKGPID 193
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
D GA+IGKGG IR ++ ++GA I++ P ER+IT++ S
Sbjct: 315 KDLAGAIIGKGGARIRKIRGDSGASITIDEPRPGSTERIITISGS 359
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDTI 70
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I EMR+
Sbjct: 71 F---KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 128 STGAQVQVAGDMLP---NSTERAVTISG 152
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPY 180
Query: 246 SPAQKAVVLVFS----RLIEG------------------------------TSEKGLDFS 271
P + ++FS I+G + GLD S
Sbjct: 181 RPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQATPAFPGLDAS 240
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 241 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME----GSSERQITI 293
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 294 TGTPANISLAQYLINARL 311
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 320 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 375
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 376 QYLINARL 383
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS 246
+FR++ VG++IG+ G II+ + GA I V + + ++ ++A E P R S
Sbjct: 28 AFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRLS 87
Query: 247 PAQKAVVLVFSRL-----IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
PA +AV+ VF R+ I+G G+ +++ L + +V +Q ++GK G+ +
Sbjct: 88 PAMEAVIEVFKRVTGLYPIDGN---GMCSKASEVKLSSVTFLVGYSQALSIIGKEGSRVR 144
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ + +GT++ I+S ++ +S ++R+++I G+ KV A+ V LR
Sbjct: 145 AIEESSGTTVGILS-RVPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLR 192
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 42 KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 100
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ LV +L+ +G +F+ + RLVV ++ G ++GKGG
Sbjct: 101 -----LFDEVIKAMELVLEKLL----AEGEEFNEAEA-RPKFRLVVPNSSCGGIIGKGGA 150
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V I+G F+ A+Y + +L D H+
Sbjct: 151 TIKAFIEDSHAGIK-ISPQDNNFVGLHDRLVTITGPFNNQMRAIYLILSKLSEDVHYPPN 209
Query: 358 LNT 360
L++
Sbjct: 210 LSS 212
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++GA I++ C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTIT---GPTD-- 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 69 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
EMR+ TG +++ D L + +R V ISG + V + L ++ G
Sbjct: 124 EMRESTGAQVQVAGDMLP---NSTERAVTISGAPEAIIQCVKQICVVLLESPPKGATIPY 180
Query: 362 RTRSTSS 368
R + S+
Sbjct: 181 RPKPAST 187
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ L + ++ +GC++G+ GT I+E+R+++G I+I + ++
Sbjct: 258 GLDASNQAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME----GSSE 310
Query: 327 RVVQISGEFSKVKDAVYNVTGRLRD 351
R + I+G + + A Y + R RD
Sbjct: 311 RQITITGTPANISLAQYLINARFRD 335
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPES 243
I+ ++ GA + V G +P ER +T++ + PE+
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGA--PEA 156
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 277 LVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGEF 335
++ +L++ SNQ GCLLGKGG IISEMRK T +IRI+ + L C ++D +VQI G+
Sbjct: 2 VITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDI 61
Query: 336 SKVKDAVYNVTGRLR 350
+ A+ VT RLR
Sbjct: 62 RAARAALVQVTSRLR 76
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 37 KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSG- 95
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ +L+ +G +F+ + RLVV ++ G ++GKGG
Sbjct: 96 -----LFDEVMKAMELILEKLL----AEGEEFNEAEA-RPKVRLVVPNSSCGGIIGKGGA 145
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V I+G F +A+ + +L D H+
Sbjct: 146 TIKSFIEESHAGIK-ISPQDNNYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDVHYPPN 204
Query: 358 LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSSSEG 413
L++ PY+ L +F + V V + Q P + N+ + G
Sbjct: 205 LSSP------------FPYAGL----TFPSYPGVPVGYMIPQVPYSNAVNYGPNNG 244
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 320 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 375
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 376 QYLINARL 383
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 320 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 375
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 376 QYLINARL 383
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDTI 70
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I EMR+
Sbjct: 71 F---KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 128 STGAQVQVAGDMLP---NSTERAVTISG 152
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPES 243
I+ ++ GA + V G +P ER +T++ + PE+
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGT--PEA 156
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 270 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME----GSSERQITITGTPANISLA 325
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 326 QYLINARL 333
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
E+R+ TG +++ D L + +R V ISG + V + + ++ G
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 178
Query: 362 RTRSTSS 368
R + S+
Sbjct: 179 RPKPAST 185
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 25/240 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q +++ R + S+ + G +IGK G + L+ E G V +P +R++TVT +
Sbjct: 42 QAQLTLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTGA---- 97
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA LV L+EG G+ N RL+++ NQ+G ++G+ G I +
Sbjct: 98 --LSGISKAYHLVAKGLLEGAPSVGMGGVINTSGTHPVRLLISHNQMGTIIGRAGLKIKQ 155
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT----- 357
++ +G +R+++ + + S +R+V+I G ++ A + + L D+H G
Sbjct: 156 IQDASG--VRMVAQKEMLPQS-TERIVEIQGTPEGIEKATWEIGKCLIDDHERGYGTVLY 212
Query: 358 -----LNTARTRSTSSVLTETSPYSRLKDPASFG---VHSSVAVSHDFSQPPL---TQDG 406
+ T ++ T Y+R F +S + S S+PP+ T+DG
Sbjct: 213 NPAVRVQAGTTGPVTNGFTGNRSYNRTGHGNDFSDSPTYSRRSGSDAASRPPMPTTTEDG 272
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 141
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 142 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 196
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 197 EIRESTGAQVQVAGDML---PNSTERAVTISGTPDAIIQCVKQI 237
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 354 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 409
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 410 QYLINARL 417
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+T GP +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT---GPTNAI 77
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 78 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 135 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 171
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 80
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 81 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 137
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT----GRLRDNHFSGTLNTA 361
TG +++ D L + +R + I+G + + V + L + G
Sbjct: 138 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 194
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
R + +SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 195 RPKPSSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 239
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + +N +GC++G+ G I+E+R+++G I+I + + R V I+G + + A
Sbjct: 304 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 359
Query: 342 VYNVTGRLRDNHFSG 356
Y + RL G
Sbjct: 360 QYLINARLSSEKGMG 374
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDTI 70
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I EMR+
Sbjct: 71 F---KAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 128 STGAQVQVAGDMLP---NSTERAVTISG 152
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPY 180
Query: 246 SPAQKAVVLVFS----RLIEG------------------------------TSEKGLDFS 271
P + ++FS I+G + GLD +
Sbjct: 181 RPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDAA 240
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 241 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME----GSSERQITI 293
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 294 TGTPANISLAQYLINARL 311
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT----GRLRDNHFSGTLNTA 361
TG +++ D L + +R + I+G + + V + L + G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
R + +SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 RPKPSSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 227
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 281 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 333
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 334 RQVTITGSAASISLAQYLINVRL 356
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISG 182
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R V ISG + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 288 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 343
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 344 QYLINARL 351
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 80
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 81 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 137
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT----GRLRDNHFSGTLNTA 361
TG +++ D L + +R + I+G + + V + L + G
Sbjct: 138 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 194
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
R + +SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 195 RPKPSSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 239
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 293 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 345
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 346 RQVTITGSAASISLAQYLINVRL 368
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 123
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 124 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 178
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 179 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 219
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 116 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 175
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 176 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 208
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 323 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGSPANISLA 378
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 379 QYLINARL 386
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 21/226 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT----GRLRDNHFSGTLNTA 361
TG +++ D L + +R + I+G + + V + L + G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
R + +SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 RPKPSSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 227
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 280 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 332
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 333 RQVTITGSAASISLAQYLINVRL 355
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + + V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESD--RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D T T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTA 237
I+ ++ GA + V G +P ER +T++
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISG 150
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 271 SSNKGLLVNAR-----LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
S N G+ N + L + ++ +GC++G+ GT I+E+R+++G I+I +
Sbjct: 260 SENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GST 315
Query: 326 DRVVQISGEFSKVKDAVYNVTGRL 349
+R + I+G + + A Y + RL
Sbjct: 316 ERQITITGSPANISLAQYLINARL 339
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 97
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 98 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 152
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 153 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 193
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 90 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 149
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 150 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 182
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 297 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 352
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 353 QYLINARL 360
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 298 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 353
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 354 QYLINARL 361
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 111
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 112 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 166
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 167 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 207
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 104 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 163
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 164 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 196
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 311 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 366
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 367 QYLINARL 374
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 5/163 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVGA+IG G +R L E A + + E+ + + E + P
Sbjct: 57 FRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPP 116
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A A++ V+ + I S LD + ++ R++ S Q L+G+ G +I+ + + +
Sbjct: 117 AMDALLRVYQQTINNDS---LDVGPDN--VIVRRILAPSEQAASLIGEHGVMINSIMEAS 171
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
T IR++ D L E DRV++I G + V A+ V LR
Sbjct: 172 QTDIRVLDDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLR 214
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 298 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 353
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 354 QYLINARL 361
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 28/243 (11%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT GP
Sbjct: 39 QSMLTLRAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT---GP- 94
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
+A LV L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 95 --LHGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHP-VRLLISHNQMGTIIGRQGLKIK 151
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT---- 357
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 152 HIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTIL 208
Query: 358 LNTARTRSTSSVLTETS--------PYSRLKDPASF----GVHSSVAVSHDFSQPPL-TQ 404
N A S S T T+ PY+R + A F G +SS + D + P+ +
Sbjct: 209 YNPAVRASVGSGSTNTNMGNGYGSRPYNRTGNGADFSDQSGGYSSRRSNSDAGRFPMVAE 268
Query: 405 DGN 407
DG+
Sbjct: 269 DGD 271
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--TCPERIVTIT---GPTDAI 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A + L F I + + S V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 72 FKAFSMIALKFEEDINASMT---NSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 129 STGAQVQVAGDMLP---NSTERAVTISG 153
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I ++ L E D A++ + T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 122 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 154
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 297 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 352
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 353 QYLINARL 360
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 297 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 352
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 353 QYLINARL 360
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 22/239 (9%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT GP
Sbjct: 35 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT---GP- 90
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+A LV L+EG + G+ N RL+++ NQ+G ++G+ G I
Sbjct: 91 --LQGTARAYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKH 148
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+
Sbjct: 149 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDW--------- 196
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSS-SEGQLRCWKR 420
R T ++L +P R S +++S +V + +S P + GN + S+GQ + R
Sbjct: 197 QRGTGTIL--YNPAVRASVGGSTSMNTS-SVGNGYSSRPYNRTGNGADFSDGQSGGYGR 252
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT----GRLRDNHFSGTLNTA 361
TG +++ D L + +R + I+G + + V + L + G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
R + +SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 RPKPSSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 227
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + +N +GC++G+ G I+E+R+++G I+I + + R V I+G + + A
Sbjct: 279 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 334
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 335 QYLINARL 342
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI--SEGNCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 62/254 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPESRYSPA-QKAVVLVFSRLIEG-- 262
I+ ++ GA + V G +P ER VT S P++ Q VV++ + I+G
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTER--AVTISGTPDAIIQCVKQICVVMLEAYTIQGQY 176
Query: 263 --------------------------------------TSEK---------GLDFSSNKG 275
+SE+ GLD S
Sbjct: 177 AIPHPDLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPAS 236
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G
Sbjct: 237 ---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTP 289
Query: 336 SKVKDAVYNVTGRL 349
+ + A Y + RL
Sbjct: 290 ANISLAQYLINARL 303
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
E+R+ TG +++ D L + +R V ISG DA++
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG----TPDAIF 156
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
I+ ++ GA + V G +P ER +T++ + P++ + ++ V++
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT--PDAIFQCVKQICVVML 167
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITITGTPANISLA 321
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 322 QYLINARL 329
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTIT---GPTDAI 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A + L F I + S V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPP---VTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R V ISG + V +
Sbjct: 129 STGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 165
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I ++ L E D A++ T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 122 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 154
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISG 182
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 298 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 353
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 354 QYLINARL 361
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 320 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 375
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 376 QYLINARL 383
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 297 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 352
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 353 QYLINARL 360
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 21/226 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT----GRLRDNHFSGTLNTA 361
TG +++ D L + +R + I+G + + V + L + G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFGVHS--SVAVSHDFSQPPL 402
R + +SS + YS D ASF H+ S+ ++ D PPL
Sbjct: 183 RPKPSSSPVIFAGGQDRYSTGSDSASF-PHTTPSMCLNPDLEGPPL 227
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 268 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 320
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 321 RQVTITGSAASISLAQYLINVRL 343
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 288 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 343
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 344 QYLINARL 351
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 77
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 78 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 135 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 171
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 257 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 316
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 317 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 356
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 210
Query: 246 SPAQKAVVLVF----SRLIEG------------------------------TSEKGLDFS 271
P + ++F + I+G + GLD S
Sbjct: 211 RPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDAS 270
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 271 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITI 323
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 324 TGTPANISLAQYLINARL 341
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R V ISG + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D V ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 288 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 343
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 344 QYLINARL 351
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R +Q + R+L + G++IGKGG I L+S+ A I V P+C ER++T+++
Sbjct: 55 RYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV----PDCPGPERVLTISS 110
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
V+ V + ++ E G S++ ++ R++V +Q GC++GKGG
Sbjct: 111 D----------LPTVLQVLNEVVPNLEENGSRHGSDE---IDVRMLVHQSQAGCIIGKGG 157
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I E+R+ TG I+I S C DR++ I G+ + + + + ++ + G
Sbjct: 158 LKIKELREKTGARIKIYSHC---CPHSTDRLISICGKPNTCIECIRELIATIKTSPLKGV 214
Query: 358 LN 359
N
Sbjct: 215 NN 216
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D GA+IGKGG IR ++S++GA I++ + ++R+IT+T
Sbjct: 401 DLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITG 443
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 298 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 353
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 354 QYLINARL 361
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 98/176 (55%), Gaps = 20/176 (11%)
Query: 177 LDARTQQQE---VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
+DA+++ ++ R++ +VG++IGK G I++ + E+GA I++ + C ER++
Sbjct: 1 MDAKSKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SDGSCPERIV 58
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRL---IEGTSEK-GLDFSSNKGLLVNARLVVASNQV 289
T++ S E+ Y KA L+ +++ IE + K G G+ + RL+V ++Q
Sbjct: 59 TISGST--EAIY----KAFSLICTKVEEFIEMQNGKTGATAIGKCGMTL--RLIVPASQC 110
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
G L+GKGG I E+R+ TG I++ SD L + +R V ++G + ++++
Sbjct: 111 GSLIGKGGNKIKEIREATGAQIQVASDVLPQ---STERAVTLTGTRDSITQCIFHI 163
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
P + ++PA A L S+L S ++ S G + + V ++ +GC++GKGGT I
Sbjct: 279 PANSFNPAALAA-LAGSQLRSNGSGANINSRSGGGQQTH-EMTVPNDLIGCIIGKGGTKI 336
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+E+R+++G IRI + + + + DR + I+G V A Y + R+
Sbjct: 337 AEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQYLINMRI 385
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 77
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 78 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 135 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 171
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 257 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 316
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 317 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 356
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + + V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESD--RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D T T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTA 237
I+ ++ GA + V G +P ER +T++
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISG 150
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 271 SSNKGLLVNAR-----LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
S N G+ N + L + ++ +GC++G+ GT I+E+R+++G I+I +
Sbjct: 260 SENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GST 315
Query: 326 DRVVQISGEFSKVKDAVYNVTGRL 349
+R + I+G + + A Y + RL
Sbjct: 316 ERQITITGSPANISLAQYLINARL 339
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 162
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 288 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 343
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 344 QYLINARL 351
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 101
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 102 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 157 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 197
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 94 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 153
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 154 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 186
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 301 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 356
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 357 QYLINARL 364
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R +Q + R+L + G++IGKGG I L+S+ A I V P+C ER++T+++
Sbjct: 69 RYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV----PDCPGPERVLTISS 124
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
V+ V + ++ E G S++ ++ R++V +Q GC++GKGG
Sbjct: 125 D----------LPTVLQVLNEVVPNLEENGSRHGSDE---IDVRMLVHQSQAGCIIGKGG 171
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I E+R+ TG I+I S C DR++ I G+ + + + + ++ + G
Sbjct: 172 LKIKELREKTGARIKIYSHC---CPHSTDRLISICGKPNTCIECIRELIATIKTSPLKGV 228
Query: 358 LN 359
N
Sbjct: 229 NN 230
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D GA+IGKGG IR ++S++GA I++ + ++R+IT+T
Sbjct: 374 DLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITG 416
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISG 182
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 210
Query: 246 SPAQKAVVLVF----SRLIEG------------------------------TSEKGLDFS 271
P + ++F + I+G + GLD S
Sbjct: 211 RPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDAS 270
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 271 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITI 323
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 324 TGTPANISLAQYLINARL 341
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 101
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 102 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 157 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 197
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 94 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 153
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 154 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 186
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 300 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 355
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 356 QYLINARL 363
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 321
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 322 QYLINARL 329
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 62/254 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPESRYSPA-QKAVVLVFSRLIEG-- 262
I+ ++ GA + V G +P ER VT S P++ Q VV++ + I+G
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTER--AVTISGTPDAIIQCVKQICVVMLEAYTIQGQY 208
Query: 263 --------------------------------------TSEK---------GLDFSSNKG 275
+SE+ GLD S
Sbjct: 209 AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPAS 268
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G
Sbjct: 269 ---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTP 321
Query: 336 SKVKDAVYNVTGRL 349
+ + A Y + RL
Sbjct: 322 ANISLAQYLINARL 335
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 298 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 353
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 354 QYLINARL 361
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR++ KVG++IG+ G +I+ + E A I V +R++ ++ E ES SP
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A AV+ VF R + G SE + K + RL+VAS Q L+GK G++I +++ T
Sbjct: 143 AMDAVIRVFKR-VSGLSE---NEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQEST 198
Query: 308 GTSIRIISDQLL 319
G S+R++S +L
Sbjct: 199 GASVRVLSGGML 210
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 183
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 297 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 352
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 353 QYLINARL 360
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+RK
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRK 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + ++ + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTEQAITIAGMPQSVTECVKQI 162
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D +S KG + L + +N +GC++G+ GT I+E+R+
Sbjct: 248 FAMMHGGTGFAGIDSNSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGTNINEIRQ 307
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + +L
Sbjct: 308 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINAKL 347
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+ A I+V C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERIVTIT---GPTD-- 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 69 -----AIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
EMR+ TG +++ D L + +R V ISG
Sbjct: 124 EMRESTGAQVQVAGDMLP---NSTERAVTISG 152
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
G+D SS L + ++ +GC++G+ GT I+E+R+++G I+I + +D
Sbjct: 259 GVDASSQAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME----GSSD 311
Query: 327 RVVQISGEFSKVKDAVYNVTGRLRD 351
R + I+G + + A Y + R RD
Sbjct: 312 RQITITGTPANISLAQYLINARFRD 336
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPES 243
I+ ++ GA + V G +P ER +T++ + PE+
Sbjct: 121 KIKEMRESTGAQVQVAGDMLPNSTERAVTISGT--PEA 156
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 321
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 322 QYLINARL 329
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
R+L +VG++I K G ++ ++ E+GA S+ C ER+IT+ GP +
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLA---GPTNAIF-- 69
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
KA ++ +L EG S + ++ V RLVV ++Q G L+GKGG I E+R+ TG
Sbjct: 70 -KAFAMIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTG 128
Query: 309 TSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN-------HFSGTLNTA 361
+++ D L + + + I+G + + V + + + H G T
Sbjct: 129 AQVQVAGDMLP---NSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITY 185
Query: 362 RTRSTSSVLTETSP---YSRLKDPASFG-VHSSVAVSHDFSQPPL 402
R + +SS++ YS D ASF S+ ++ D PPL
Sbjct: 186 RPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPL 230
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 36 KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 94
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ +L+ +G +F+ + RLVV ++ G ++GKGG
Sbjct: 95 -----LFDEVMKAMELILEKLL----AEGEEFNEAEA-RPKVRLVVPNSSCGGIIGKGGA 144
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V ++G F +A+ + +L D H+
Sbjct: 145 TIKSFIEESHAGIK-ISPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPN 203
Query: 358 LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSSSEG 413
L++ PY+ L +F + V V + Q P N+ + G
Sbjct: 204 LSSP------------FPYAGL----TFPNYPGVPVGYMIPQVPYNNAVNYGPNNG 243
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 321
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 322 QYLINARL 329
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 54/218 (24%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS- 238
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P ER IT+ +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 239 ---------------EGPES------RYSPAQKAVVLVFSRLIEGTSEKGL---DFS--- 271
E P R P+ V+ + + + D +
Sbjct: 153 QSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 272 -------------SNKGLL-VNA-------RLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
SN+G ++A + + ++ +GC++G+ G I+E+R+++G
Sbjct: 213 QLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQ 272
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
I+I + DR V I+G + + A Y + R
Sbjct: 273 IKIAN----PVDGSTDRQVTITGSPASISLAEYLINAR 306
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R +Q + R+L + G++IGKGG I L+S+ A I V P+C ER++T+++
Sbjct: 76 RYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV----PDCPGPERVLTISS 131
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
V+ V + ++ E G S++ ++ R++V +Q GC++GKGG
Sbjct: 132 D----------LPTVLQVLNEVVPNLEENGSRHGSDE---IDVRMLVHQSQAGCIIGKGG 178
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I E+R+ TG I+I S C DR++ I G+ + + + + ++ + G
Sbjct: 179 LKIKELREKTGARIKIYSHC---CPHSTDRLISICGKPTTCIECIRELIATIKTSPLKGV 235
Query: 358 LN 359
N
Sbjct: 236 NN 237
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D GA+IGKGG IR ++S++GA I++ + ++R+IT+T
Sbjct: 417 DLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITG 459
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 14/181 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G I++++ +GA I++ C ER++T+T +
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGN------V 74
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ ++ E + L S K + RL+V + Q G L+GKGG+ I E+R+
Sbjct: 75 DTINKAFSMICNKFQE--DMQALPNSVPKPP-ITMRLIVPATQCGSLIGKGGSKIKEIRE 131
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG SI++ S+ L S +R V ISG + + ++ L + GT R +
Sbjct: 132 ATGASIQVASEMLP---SSTERAVTISGSADAIVLCMQHICHILLEAPPKGTTLPYRPKP 188
Query: 366 T 366
T
Sbjct: 189 T 189
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 288 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 343
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 344 QYLINARL 351
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 288 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 343
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 344 QYLINARL 351
>gi|219886695|gb|ACL53722.1| unknown [Zea mays]
Length = 702
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVAT-LDARTQQQEVSFRILCSNDKVGAVIGKGG 205
N+ AP+ VS +PL ++ DA T QE+S +I N KVG VIGK G
Sbjct: 104 NNTPAPAPAPDSQAVSDEKPLEAAAEAPQQEGDAATAVQEISRKIEVPNSKVGVVIGKAG 163
Query: 206 TIIRALQSEAGAFISVGATMPECDERLIT--VTASEGPESRYSPAQKAVVLVFSRLIEGT 263
IR LQ +GA I + + E D +T V P S KA L+ S + E
Sbjct: 164 ETIRNLQISSGAKIQITKDI-EADSNALTRPVELVGTPGS----VDKAEQLIKSVIAE-- 216
Query: 264 SEKGL-------DFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD 316
+E G F S + + V N+VG ++GKGG I M+ +G I++I
Sbjct: 217 AEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGKGGETIKGMQTKSGARIQLIPQ 276
Query: 317 QLLKCISENDRVVQISGEFSKVKDA 341
+ ++ +R+V+++G +++ A
Sbjct: 277 HPPEGVTLTERIVRVTGNKKQIEAA 301
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 321
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 322 QYLINARL 329
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTPANISLA 321
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 322 QYLINARL 329
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 22/239 (9%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT GP
Sbjct: 40 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT---GP- 95
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+A LV L+EG + G+ N RL+++ NQ+G ++G+ G I
Sbjct: 96 --LQGTARAYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKH 153
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+
Sbjct: 154 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDW--------- 201
Query: 363 TRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSS-SEGQLRCWKR 420
R T ++L +P R S +++S +V + ++ P + GN + S+GQ + R
Sbjct: 202 QRGTGTIL--YNPAVRASVGGSTSMNTS-SVGNGYNSRPYNRTGNGADFSDGQSGGYGR 257
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 105/257 (40%), Gaps = 63/257 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 178
Query: 246 SPAQKAVVLVF----SRLIEG-----------------------------TSEKGLDFSS 272
P + ++F + I+G + GLD S
Sbjct: 179 RPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGLDASP 238
Query: 273 NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQIS 332
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+
Sbjct: 239 PAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITIT 291
Query: 333 GEFSKVKDAVYNVTGRL 349
G + + A Y + RL
Sbjct: 292 GTPANISLAQYLINARL 308
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 11/183 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R V ISG + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKP 182
Query: 366 TSS 368
S+
Sbjct: 183 ASA 185
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 54/219 (24%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS- 238
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P ER IT+ +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 239 ---------------EGPES------RYSPAQKAVVLVFSRLIEGTSEKGL---DFS--- 271
E P R P+ V+ + + + D +
Sbjct: 153 QSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 272 -------------SNKGLL-VNA-------RLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
SN+G ++A + + ++ +GC++G+ G I+E+R+++G
Sbjct: 213 QLAMQQSPFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQ 272
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
I+I + DR V I+G + + A Y + RL
Sbjct: 273 IKIAN----PVDGSTDRQVTITGSPASISLAEYLINARL 307
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P +F + AV H QP LT+
Sbjct: 183 SGS-------------PVTFAGGQAYAVQGQHAIPQPDLTK 210
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 61/223 (27%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMP------------- 226
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 227 ----ECDERLITVTASEGPES---RYSPAQKAVVLVFS----RLIEGTSE---------- 265
EC +++ V P+ Y P + F+ ++G
Sbjct: 153 LSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVTFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 266 -------------------KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
G+D ++ G + L + ++ +GC++G+ G I+E+R++
Sbjct: 213 QLAMQQSPFPLAPSSQGFTAGMDATTQTG---SHELTIPNDLIGCIIGRQGAKINEIRQM 269
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I + NDR V I+G + + A Y + RL
Sbjct: 270 SGAQIKIAN----PVEGSNDRQVTITGSPASISLAEYLINARL 308
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 79 VEAVPQEILWRSLESGPQ--EILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILP 136
+E V Q I LES P+ I RP +P + +A +++ QH A+ Q L
Sbjct: 156 IECVKQ-ICVVMLESPPKGVTIPYRPKPSGSP-VTFAGGQAYAVQGQH----AIPQPDLT 209
Query: 137 DLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDK 196
LH L+ + S APSS A +DA TQ S + ND
Sbjct: 210 KLHQ--LAMQQSPFPLAPSSQ--------------GFTAGMDATTQTG--SHELTIPNDL 251
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
+G +IG+ G I ++ +GA I + + ++R +T+T S
Sbjct: 252 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGS 293
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPESRY 245
R+L + G++IGKGG I L++E A + T+P+C ER++TV A
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASV----TVPDCPGPERILTVAAD------- 73
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
++ V S ++ + +++ R++V +Q GC++GKGG I E+R+
Sbjct: 74 ---LDTMLRVVSEILPNLED-----------VIDIRMLVHQSQAGCIIGKGGLKIKELRE 119
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLN 359
TG I+I S+ C DR+VQI+G+ + DA+ L+ + G N
Sbjct: 120 KTGARIKIYSNC---CPQSTDRIVQINGKGNLCVDAIRECMELLKTSPIKGMNN 170
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITV--TASEGPESR 244
S ++ D GA+IGKGG+ IR ++ E+GA I++ +P ++R+IT+ T ++ ++
Sbjct: 292 STQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPNQIQMAQ 351
Query: 245 YSPAQKAVVLV 255
Y Q+ V L+
Sbjct: 352 YLLQQRLVYLI 362
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 67
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 68 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 124
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 125 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 161
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 247 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 306
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R + I+G + + A Y + RL
Sbjct: 307 MSGAQIKIAN----PVEGSSGRQITITGSAASISLAQYLINARL 346
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 14/181 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G I++++ +GA I++ C ER++T+T +
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGN------V 74
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ ++ E + L S K + RL+V + Q G L+GKGG+ I E+R+
Sbjct: 75 DTINKAFSMICNKFQE--DMQALPNSVPKPP-ITMRLIVPATQCGSLIGKGGSKIKEIRE 131
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG SI++ S+ L S +R V ISG + + ++ L + GT R +
Sbjct: 132 ATGASIQVASEMLP---SSTERAVTISGSADAIVLCMQHICHILLEAPPKGTTLPYRPKP 188
Query: 366 T 366
T
Sbjct: 189 T 189
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 86/219 (39%), Gaps = 54/219 (24%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS- 238
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P ER IT+ +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 239 -------------------EGPESRYSPAQKAVVLVF----SRLIEGT------------ 263
+G Y P ++F + ++G
Sbjct: 153 QSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 264 -------------SEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
S +G + + + ++ +GC++G+ G I+E+R+++G
Sbjct: 213 QLAMQQSPFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQ 272
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
I+I + DR V I+G + + A Y + RL
Sbjct: 273 IKIAN----PVDGSTDRQVTITGSPASISLAEYLINARL 307
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
G+D SS L + ++ +GC++G+ GT I+E+R+++G I+I S +
Sbjct: 254 GMDASSQAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAME----GSAE 306
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R + I+G + + A Y + RL
Sbjct: 307 RQITITGSPANISLAQYLINARL 329
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT 234
A +DA +Q + + ND +G +IG+ GT I ++ +GA I + + M ER IT
Sbjct: 253 AGMDASSQAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQIT 310
Query: 235 VTAS 238
+T S
Sbjct: 311 ITGS 314
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 248 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 307
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 308 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 347
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 67
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 68 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 124
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 125 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 161
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 247 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 306
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 307 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 346
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 98
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 99 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L + +R V ISG + V +
Sbjct: 154 EIRESTGAQVQVAGDMLP---NSTERAVTISGTPDAIIQCVKQI 194
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 62/254 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 150
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPESRYSPA-QKAVVLVFSRLIEG-- 262
I+ ++ GA + V G +P ER VT S P++ Q VV++ + I+G
Sbjct: 151 KIKEIRESTGAQVQVAGDMLPNSTER--AVTISGTPDAIIQCVKQICVVMLEAYTIQGQY 208
Query: 263 --------------------------------------TSEK---------GLDFSSNKG 275
+SE+ GLD S
Sbjct: 209 AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPAS 268
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G
Sbjct: 269 ---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTP 321
Query: 336 SKVKDAVYNVTGRL 349
+ + A Y + RL
Sbjct: 322 ANISLAQYLINARL 335
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 263 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITITGTPANISLA 318
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 319 QYLINARL 326
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G+ I+E+R+
Sbjct: 248 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGSNINEIRQ 307
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 308 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 347
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 15/105 (14%)
Query: 256 FSRLIEGTSEKGLDFSSNK------GLLVNAR-----LVVASNQVGCLLGKGGTIISEMR 304
F+ + GT G+D SS + GL +A+ L + ++ +GC++G+ G I+E+R
Sbjct: 248 FAMMHGGTGFAGIDSSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIR 307
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+++G I+I + DR V I+G + + A Y + RL
Sbjct: 308 QMSGAQIKIAN----PVEGSTDRQVTITGSAASISLAQYLINVRL 348
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 248 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 307
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 308 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 347
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 178
Query: 246 SPAQKAVVLVF----SRLIEG------------------------------TSEKGLDFS 271
P + ++F + I+G + GLD S
Sbjct: 179 RPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDAS 238
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 239 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITI 291
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 292 TGTPANISLAQYLINARL 309
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 248 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 307
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 308 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 347
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT------ 75
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A+ F+ LI E+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 76 ----NAIFSAFT-LITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 131 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 267 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 325
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 326 QYLINMRI 333
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+A+ L+ R A R QQQ+ + SND +G +IGKGGT I ++ +GA I +
Sbjct: 241 TALAALAGSQLRTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI 298
Query: 222 GATMPECDERLI-----TVTASEGPES 243
C+ER T+T S P+S
Sbjct: 299 S----NCEEREGGNTDRTITISGNPDS 321
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 178
Query: 246 SPAQKAVVLVF----SRLIEG------------------------------TSEKGLDFS 271
P + ++F + I+G + GLD S
Sbjct: 179 RPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDAS 238
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 239 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITI 291
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 292 TGTPANISLAQYLINARL 309
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 248 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 307
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 308 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 347
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSNK------GLLVNAR----LVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS + GL + + L + +N +GC++G+ G I+E+R+
Sbjct: 248 FAMMHGGTGFAGIDSSSPEVKGYWAGLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 307
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 308 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 347
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 61/223 (27%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMP------------- 226
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 227 ----ECDERLITVTASEGPES---RYSPAQKAVVLVFS----RLIEGTS----------- 264
EC +++ V P+ Y P ++F+ ++G
Sbjct: 153 QSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 265 ------------------EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
+ G+D S+ + + + ++ +GC++G+ G+ I+E+R++
Sbjct: 213 QLAMQQSPFPMGPNNPGFQGGMDASAQTS---SHEMTIPNDLIGCIIGRQGSKINEIRQM 269
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I + DR V I+G + + A Y + RL
Sbjct: 270 SGAQIKIANP----VEGSADRQVTITGSAASISLAEYLINARL 308
>gi|226529800|ref|NP_001141507.1| uncharacterized protein LOC100273619 [Zea mays]
gi|194704864|gb|ACF86516.1| unknown [Zea mays]
gi|223950149|gb|ACN29158.1| unknown [Zea mays]
gi|413941634|gb|AFW74283.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 702
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVAT-LDARTQQQEVSFRILCSNDKVGAVIGKGG 205
N AP+ VS +PL ++ DA T QE+S +I N KVG VIGK G
Sbjct: 104 NDTPAPAPAPDSQAVSDEKPLEAAAEAPQQEGDAATAVQEISRKIEVPNSKVGVVIGKAG 163
Query: 206 TIIRALQSEAGAFISVGATMPECDERLIT--VTASEGPESRYSPAQKAVVLVFSRLIEGT 263
IR LQ +GA I + + E D +T V P S KA L+ S + E
Sbjct: 164 ETIRNLQISSGAKIQITKDI-EADSNALTRPVELVGTPGS----VDKAEQLIKSVIAE-- 216
Query: 264 SEKGL-------DFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD 316
+E G F S + + V N+VG ++GKGG I M+ +G I++I
Sbjct: 217 AEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGKGGETIKGMQTKSGARIQLIPQ 276
Query: 317 QLLKCISENDRVVQISGEFSKVKDA 341
+ ++ +R+V+++G +++ A
Sbjct: 277 HPPEGVTLTERIVRVTGNKKQIEAA 301
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 341 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 399
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 400 QYLINMRI 407
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R A R QQQ+ + SND +G +IGKGGT I ++ +GA I + C+ER
Sbjct: 326 RTANPANRAQQQQHEMTV--SNDLIGCIIGKGGTKIAEIRQISGAMIRIS----NCEERE 379
Query: 233 I-----TVTASEGPES 243
T+T S P+S
Sbjct: 380 GGNTDRTITISGNPDS 395
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
Q+QEV++ + VGA+IGK G I+ L AGA I V A MP+ ER++ +T +
Sbjct: 431 QEQEVAY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGT-- 487
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + + V S G ++GKGG +
Sbjct: 488 PEAQF----KAQGRIFGKLKEENI-----FTGKEEVRLETHIKVPSTAAGRVIGKGGKTV 538
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
+E++ +T + + DQ +N+ VV+I G F
Sbjct: 539 NELQSLTSAEVIVPRDQTPD--EKNEVVVKICGHF 571
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLI 233
RT QQ+ RI+ VGA+IGK G I+ + + + + + GA E+ I
Sbjct: 193 RTTQQD--LRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAA-----EKPI 245
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
T+ ++ PE S A + ++ + + E K ++ + +++ ++N +G L+
Sbjct: 246 TIHST--PEG-CSAACRMIMEIMQK--EANETKAMED-------IPLKIIASNNYIGRLI 293
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GK G + ++ + TGT I I S Q L I N+R + + G +A + +LR+ +
Sbjct: 294 GKQGRNLKKIEEETGTKITISSLQDLN-IYNNERTITVKGSLEACCNAEVEIMKKLREAY 352
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+L KVGAVIG G +R L E A + V ER + + A E P+ P
Sbjct: 242 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 301
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
A A++ V+ I ++ GLD N +V AR++ S Q L+G G++I+ ++K +
Sbjct: 302 AIDALLRVYECTI---NDDGLDVRYNN--IVVARILTPSEQAASLIGDQGSVINYIKKAS 356
Query: 308 GTSIRIISDQL 318
T+I +I + L
Sbjct: 357 KTNIHVIGNFL 367
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+T GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G V + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGVPQSVTECVKQI 162
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + ++ V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG+ +++ D L + +R V ISG
Sbjct: 126 STGSQVQVAGDMLP---NSTERAVTISG 150
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ G+ + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGSQVQVAGDMLPNSTERAVTISGT 151
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 21/165 (12%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS 238
R +V R L ++ GA+IGKGG+ I+ L+ + A ++V +T PE R++T+ A+
Sbjct: 72 RGDGPKVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDSTSPE---RVLTIGAN 128
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
G A + V+ + +L + + K DF RL+V +Q GC++G+ G
Sbjct: 129 LGT------ALECVLDIIPKLEDYKNYKNNDFD------CEMRLLVHQSQAGCIIGRAGF 176
Query: 299 IISEMRKVTGTSIRIISDQLLKCISEN-DRVVQISGEFSKVKDAV 342
I E+R+ TG I++ S +C E+ +RVV I G+ V D +
Sbjct: 177 KIKELRERTGAQIKVYS----QCCPESTERVVAIGGKPKIVVDCI 217
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A
Sbjct: 259 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITITGTPANISLA 314
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 315 QYLINARL 322
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 127 FGAVSQE--ILPDLHVDILSQRNSVLTTAPSSSI--SYVSAVRPLSLESDRVATLDARTQ 182
A++Q+ ++P L+++ L +S L P ++ S V AV P +
Sbjct: 358 IAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAPAGYNP-----FLQQAP 412
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ ER++ +T + P
Sbjct: 413 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGT--P 469
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E FS+ + + + + V S+ G ++GKGG ++
Sbjct: 470 EAQF----KAQGRIFGKLKEENF-----FSAKEEVKLETHIKVPSSAAGRVIGKGGKTVN 520
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ END V V+ISG F
Sbjct: 521 ELQNLTSAEVIVPRDQ---TPDENDEVFVKISGHF 552
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R +Q + R+L VGA+IGK G I+ + + + + + R A+E
Sbjct: 193 RPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI--------HRKENAGAAE 244
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P + +S + R+I +K + + + +++ ++ VG L+GK G
Sbjct: 245 KPITIHSTPEGCSAAC--RMILDIMQKEAN-ETKTTEDIPLKILAHNSLVGRLIGKEGRN 301
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ ++ + TGT I I S Q L I +R + + G A +T +LR+ +
Sbjct: 302 LKKIEEDTGTKITISSLQDL-TIYNPERTITVKGSIDACCKAEVEITKKLREAY 354
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 62/254 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPESRYSPA-QKAVVLVFSRLIEG-- 262
I+ ++ GA + V G +P ER VT S P++ Q VV++ + I+G
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTER--AVTISGTPDAIIQCVKQICVVMLEAYTIQGQY 176
Query: 263 --------------------------------------TSEK---------GLDFSSNKG 275
+SE+ GLD S
Sbjct: 177 AIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPAS 236
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I+G
Sbjct: 237 ---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN----ATEGSSERQITITGTP 289
Query: 336 SKVKDAVYNVTGRL 349
+ + A Y + RL
Sbjct: 290 ANISLAQYLINARL 303
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G + + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTAHSIIECVKQI 162
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 86/228 (37%), Gaps = 63/228 (27%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMP------------- 226
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTA 152
Query: 227 ----ECDERLITVTASEGPES---RYSPAQKAVVLVFS----RLIEG------------- 262
EC +++ V P+ Y P ++F+ ++G
Sbjct: 153 HSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSAA 212
Query: 263 ---------------------TSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
T +G + + + ++ +GC++G+ G IS
Sbjct: 213 ISPQLSKLHQLAMQQGPFPMATCNQGFTGMDASAQACSHEMTIPNDLIGCIIGRQGAKIS 272
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
E+R+++G I+I + DR V I+G + + A Y + RL
Sbjct: 273 EIRQMSGAQIKIAN----PVDGSTDRQVTITGSPASIGLAEYLIKARL 316
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 70/263 (26%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMP-----------------ECDERLITVTASEGPES---RYSPAQ 249
++ GA + V G +P EC +++ V P+ Y P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 250 KAVVLVFS----RLIEG----------------------------TSEKGLDFSSN---- 273
+ ++F+ I+G T G++ SS
Sbjct: 183 SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKG 242
Query: 274 --KGLLVNAR-----LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GL +A+ L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 298
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 299 RQVTITGSAASISLAQYLINVRL 321
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G + + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQI 162
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 90/232 (38%), Gaps = 70/232 (30%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMP------------- 226
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 227 ----ECDERLITVTASEGPES---RYSPAQKAVVLVFS----RLIEGTS----------- 264
EC +++ V P+ Y P ++F+ ++G
Sbjct: 153 QSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSAS 212
Query: 265 ---------------------------EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ G+D S+ + + + ++ +GC++G+ G
Sbjct: 213 ISPQLTKLHQLAMQQSPFPMGPNNPGFQGGMDASAQTS---SHEMTIPNDLIGCIIGRQG 269
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+ I+E+R+++G I+I + DR V I+G + + A Y + RL
Sbjct: 270 SKINEIRQMSGAQIKIANP----VEGSADRQVTITGSAASISLAEYLINARL 317
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT------ 75
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 76 SAIFSAFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 271 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 329
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 330 QYLINMRI 337
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 127 FGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEV 186
+ +QE+ + + + + + A + I++ +A+ L+ R A + R QQQ+
Sbjct: 211 YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANAN-RAQQQQH 269
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-----TVTASEGP 241
+ SND +G +IGKGGT I ++ +GA I + C+ER T+T S P
Sbjct: 270 EMTV--SNDLIGCIIGKGGTKIAEIRQISGAMIRIS----NCEEREGGNTDRTITISGNP 323
Query: 242 ES 243
+S
Sbjct: 324 DS 325
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSS 368
+SS
Sbjct: 183 SSS 185
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 69 F---KAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 126 STGAQVQVAGDMLP---NSTERAVTISG 150
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 64/258 (24%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D ++++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 178
Query: 246 SPAQKAVVLVF----SRLIEGTSE------------------------------KGLDFS 271
P + ++F + I+G GLD S
Sbjct: 179 RPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPAGLDAS 238
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
L + ++ +GC++G+ GT I+E+R+++G I+I + ++R + I
Sbjct: 239 PPAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITI 291
Query: 332 SGEFSKVKDAVYNVTGRL 349
+G + + A Y + RL
Sbjct: 292 TGTPANISLAQYLINARL 309
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTSI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
G +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 SAGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 91/223 (40%), Gaps = 61/223 (27%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS- 238
T + V+ R++ + G++IGKGG I+ ++ AGA + V G +P ER IT+ +
Sbjct: 93 TSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 239 -------------------EGPESRYSPAQKAVVLVFS----RLIEGTS----------- 264
+G Y P ++F+ ++G
Sbjct: 153 QSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 265 ------------------EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
+ G+D S+ G + L + ++ +GC++G+ G I+E+R++
Sbjct: 213 QLAMQQSPFPIAHSNQGFQAGMDASAQTG---SHELTIPNDLIGCIIGRQGAKINEIRQM 269
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I + DR V I+G + + A Y + RL
Sbjct: 270 SGAQIKIANP----VEGSTDRQVTITGSHASISLAEYLINARL 308
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT------ 75
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A+ F+ LI E+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 76 ----NAIFSAFT-LITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 131 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 290 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 348
Query: 342 VY 343
Y
Sbjct: 349 QY 350
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R A R QQQ+ + SND +G +IGKGGT I ++ +GA I + C+ER
Sbjct: 275 RTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI----SNCEERE 328
Query: 233 I-----TVTASEGPES 243
T+T S P+S
Sbjct: 329 GGNTDRTITISGNPDS 344
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 352
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 353 QYLINMRI 360
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R A R QQQ+ + SND +G +IGKGGT I ++ +GA I + C+ER
Sbjct: 279 RTANPANRAQQQQHEMTV--SNDLIGCIIGKGGTKIAEIRQISGAMIRIS----NCEERE 332
Query: 233 I-----TVTASEGPES 243
T+T S P+S
Sbjct: 333 GGNTDRTITISGNPDS 348
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSS 368
+SS
Sbjct: 183 SSS 185
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSS 368
+SS
Sbjct: 183 SSS 185
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L + +R + I+G + + V +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPQSIIECVKQI 162
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 67/226 (29%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTASE 239
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P ER IT+ +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGT- 151
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLD-------------FSSNKGLLVNAR----- 281
P+S ++ V+ ++E + KG+ F+ + V +
Sbjct: 152 -PQSIIECVKQICVV----MLEQSPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQ 206
Query: 282 ---------------LVVASNQVG-----------------------CLLGKGGTIISEM 303
+A N G C++G+ G+ I+E+
Sbjct: 207 PDLTKLHQLAMQQSPFPIAPNNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEI 266
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
R+++G I+I + DR V I+G + + A Y + RL
Sbjct: 267 RQMSGAQIKIAN----PVDGSADRQVTITGSPASISLAEYLINARL 308
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 67 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 122 EIRESTGAQVQVAGDMLP---NSTERAVTISG 150
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 118
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 119 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 151
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTSI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
G +++ D L + +R + ++G + + V + + ++ G R +
Sbjct: 126 SAGAQVQVAGDMLP---NSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 61/223 (27%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS- 238
T + V+ R++ + G++IGKGG I+ ++ AGA + V G +P ER ITV +
Sbjct: 93 TSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTP 152
Query: 239 -------------------EGPESRYSPAQKAVVLVFS----RLIEGTS----------- 264
+G Y P ++F+ ++G
Sbjct: 153 QSIIECVKQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 265 ------------------EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
+ G+D S+ G + L + ++ +GC++G+ G I+E+R++
Sbjct: 213 QLAMQQSPFPIAHSNQGFQAGMDASAQTG---SHELTIPNDLIGCIIGRQGAKINEIRQM 269
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I + DR V I+G + + A Y + RL
Sbjct: 270 SGAQIKIANP----VEGSTDRQVTITGSHASISLAEYLINARL 308
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 33/215 (15%)
Query: 127 FGAVSQE--ILPDLHVDILSQRNSVLTTAPSSSI--SYVSAVRPLSLESDRVATLDARTQ 182
A++Q+ ++P L+++ L +S L P ++ S V AV P +
Sbjct: 358 IAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAP------------QQAP 405
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ ER++ +T + P
Sbjct: 406 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGT--P 462
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E FS+ + + + + V S+ G ++GKGG ++
Sbjct: 463 EAQF----KAQGRIFGKLKEENF-----FSAKEEVKLETHIKVPSSAAGRVIGKGGKTVN 513
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ END V V+ISG F
Sbjct: 514 ELQNLTSAEVIVPRDQ---TPDENDEVFVKISGHF 545
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R +Q + R+L VGA+IGK G I+ + + + + + R A+E
Sbjct: 193 RPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI--------HRKENAGAAE 244
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P + +S + R+I +K + + + +++ ++ VG L+GK G
Sbjct: 245 KPITIHSTPEGCSAAC--RMILDIMQKEAN-ETKTTEDIPLKILAHNSLVGRLIGKEGRN 301
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ ++ + TGT I I S Q L I +R + + G A +T +LR+ +
Sbjct: 302 LKKIEEDTGTKITISSLQDL-TIYNPERTITVKGSIDACCKAEVEITKKLREAY 354
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 21/170 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + ++GA I++ C ER++TVT S
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGT--CPERIVTVTGST------ 63
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSS---NKGLL-------VNARLVVASNQVGCLLGK 295
KA L+ ++ E +S G S + +L V RL+V ++Q G L+GK
Sbjct: 64 ECILKAFSLICAKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGK 123
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
G+ I E+R++TG S+++ S+ L + +R V ++G V +Y +
Sbjct: 124 AGSKIREIREITGASVQVASEMLP---NSTERTVTVAGTADAVTKCIYQI 170
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 13/81 (16%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ + ++ +GC++GKGG I+E+R+++G +I+I S + +R V ISG + A
Sbjct: 309 MQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE----GSKERCVSISGTPEAINLA 364
Query: 342 VYNVT---------GRLRDNH 353
Y + RL+ NH
Sbjct: 365 QYLINTRQVSLRKASRLQSNH 385
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 16/160 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT------ 75
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A+ F+ LI E+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 76 ----NAIFSAFT-LITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 131 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 330
Query: 342 VY 343
Y
Sbjct: 331 QY 332
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R A R QQQ+ + SND +G +IGKGGT I ++ +GA I + C+ER
Sbjct: 257 RTANPANRAQQQQ--HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI----SNCEERE 310
Query: 233 I-----TVTASEGPES 243
T+T S P+S
Sbjct: 311 GGNTDRTITISGNPDS 326
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 56 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTD-- 108
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A+ F+ + E ++ SN V RLVV ++Q G L+GKGG+ I
Sbjct: 109 -----AIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 163
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 164 EIRESTGAQVQVAGDMLP---NSTERAVTISG 192
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 44/241 (18%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 101 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 160
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS--------------------EGPESRY 245
I+ ++ GA + V G +P ER +T++ + +G Y
Sbjct: 161 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPY 220
Query: 246 SPAQKAVVLVF----SRLIEGTSE----------KGLDFSSNKGLLVNA---RLVVASNQ 288
P + ++F + I+G L FSS A L + ++
Sbjct: 221 RPKPASTPVIFAGGQAYTIQGQYAIPHPDVSFHFVCLPFSSCLDASPPASTHELTIPNDL 280
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
+GC++G+ GT I+E+R+++G I+I + ++R + I+G + + A Y + R
Sbjct: 281 IGCIIGRQGTKINEIRQMSGAQIKIANATE----GSSERQITITGTPANISLAQYLINAR 336
Query: 349 L 349
L
Sbjct: 337 L 337
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ G I+E+R+++G I+I + NDR V I+G + + A
Sbjct: 280 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTITGSTASISLA 335
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 336 QYLINVRL 343
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 328
Query: 342 VY 343
Y
Sbjct: 329 QY 330
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 127 FGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEV 186
+ +QE+ + + + + +T A + I++ +A+ L+ R A + R QQQ+
Sbjct: 211 YAVPTQEVAKNPLASLAALGLAGMTPASTGGINH-TALAALAGSQLRTANAN-RAQQQQ- 267
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-----TVTASEGP 241
+ SND +G +IGKGGT I ++ +GA I + C+ER T+T S P
Sbjct: 268 -HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRIS----NCEEREGGNTDRTITISGNP 322
Query: 242 ES 243
+S
Sbjct: 323 DS 324
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 276 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 334
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 335 QYLINMRI 342
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERL 232
R A R QQQ+ + SND +G +IGKGGT I ++ +GA I + C+ER
Sbjct: 261 RTANPANRAQQQQHEMTV--SNDLIGCIIGKGGTKIAEIRQISGAMIRIS----NCEERE 314
Query: 233 I-----TVTASEGPES 243
T+T S P+S
Sbjct: 315 GGNTDRTITISGNPDS 330
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 328
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 329 QYLINMRI 336
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 127 FGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEV 186
+ +QE+ + + + + +T A + I++ +A+ L+ R A + R QQQ+
Sbjct: 211 YAVPTQEVAKNPLASLAALGLAGMTPASTGGINH-TALAALAGSQLRTANAN-RAQQQQH 268
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-----TVTASEGP 241
+ SND +G +IGKGGT I ++ +GA I + C+ER T+T S P
Sbjct: 269 EMTV--SNDLIGCIIGKGGTKIAEIRQISGAMIRIS----NCEEREGGNTDRTITISGNP 322
Query: 242 ES 243
+S
Sbjct: 323 DS 324
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ G I+E+R+++G I+I + NDR V I+G + + A
Sbjct: 280 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTITGSTASISLA 335
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 336 QYLINVRL 343
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 330
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 331 QYLINMRI 338
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 127 FGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEV 186
+ +QE+ + + + + + A + I++ +A+ L+ R A R QQQ+
Sbjct: 211 YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQH 270
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-----TVTASEGP 241
+ SND +G +IGKGGT I ++ +GA I + C+ER T+T S P
Sbjct: 271 EMTV--SNDLIGCIIGKGGTKIAEIRQISGAMIRIS----NCEEREGGNTDRTITISGNP 324
Query: 242 ES 243
+S
Sbjct: 325 DS 326
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 61/223 (27%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMP------------- 226
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 227 ----ECDERLITVTASEGPES---RYSPAQKAVVLVFS----RLIEGTSE---------- 265
EC +++ V P+ Y P ++F+ ++G
Sbjct: 153 LSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 266 -------------------KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
G+D ++ G + L + ++ +GC++G+ G I+E+R++
Sbjct: 213 QLAMQQSPFPLAPSSQGFTAGMDATTQTG---SHELTIPNDLIGCIIGRQGAKINEIRQM 269
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I + NDR V I+G + + A Y + RL
Sbjct: 270 SGAQIKIAN----PVEGSNDRQVTITGSPASISLAEYLINARL 308
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 16/173 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFI-----SVGATMPECDERLITVTASEGPE 242
FR++ KVG++IG+ G +I+ L E A + VGAT ER++ V+ E P+
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGAT-----ERIVLVSGKEDPD 102
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL--LVNARLVVASNQVGCLLGKGGTII 300
PA A++ VF + + G ++ + + + ARL+V Q L+GK G I
Sbjct: 103 LELPPAMDALMRVF-KXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATI 161
Query: 301 SEMRKVTGTSIRIIS-DQLLK--CISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+++ T +IR+IS D+ + +++++R+V+I G+ KV A+ V+ LR
Sbjct: 162 KAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSS 368
+SS
Sbjct: 183 SSS 185
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 61/251 (24%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDART--QQQEVSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T + V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMPECDERLITVTA--------------------SEGPESRYSPAQ 249
++ GA + V G +P ER IT+ +G Y P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 250 KAVVLVFS----RLIEG-----------------------TSEKGLDFSSNKGLLVNAR- 281
+ ++F+ I+G S FS+ GL +A+
Sbjct: 183 SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSA--GLDASAQT 240
Query: 282 ----LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
L + ++ +GC++G+ G I+E+R+++G I+I + DR V I+G +
Sbjct: 241 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTITGSAAS 296
Query: 338 VKDAVYNVTGR 348
+ A Y + R
Sbjct: 297 ISLAQYLINVR 307
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ G I+E+R+++G I+I + NDR V I+G + + A
Sbjct: 280 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTITGSTASISLA 335
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 336 QYLINVRL 343
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 26/221 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V R+VV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSSVLTETSPYSRLKDPASFGVHSSVAV--SHDFSQPPLTQ 404
+ S P F + AV H QP LT+
Sbjct: 183 SGS-------------PVIFAGGQAYAVQGQHAIPQPDLTK 210
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 61/223 (27%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS- 238
T + V+ RI+ + G++IGKGG I+ ++ GA + V G +P ER IT+ +
Sbjct: 93 TSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTP 152
Query: 239 -------------------EGPESRYSPAQKAVVLVF----SRLIEGT------------ 263
+G Y P ++F + ++G
Sbjct: 153 LSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLH 212
Query: 264 -------------SEKG----LDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
S +G +D S+ G + L + ++ +GC++G+ G I+E+R++
Sbjct: 213 QLAMQQSPFPLAPSSQGFTAGMDASAQTG---SHELTIPNDLIGCIIGRQGAKINEIRQM 269
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I + +DR V I+G + + A Y + RL
Sbjct: 270 SGAQIKIANP----VEGSSDRQVTITGSPASISLAEYLINARL 308
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + ++ +GC++G+ G I+E+R+++G I+I + NDR V I+G + + A
Sbjct: 280 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTITGSTASISLA 335
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 336 QYLINVRL 343
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ VG++IGK G I+ + E+GA I++ ER++T+T S E+
Sbjct: 20 LTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDG--SSPERIVTITGST--ENIL 75
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E ++ SS V RL+V ++Q G L+GKGG+ I E+R+
Sbjct: 76 ----KAFNMIGKKFEEDMKAAHVN-SSVPVPPVTLRLIVPASQCGSLIGKGGSKIKEIRE 130
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
VTG SI++ D L + +R V +SG + VY++
Sbjct: 131 VTGASIQVAGDMLP---NSTERAVTVSGTPDAISQCVYHI 167
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 55/215 (25%)
Query: 170 ESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPEC 228
E + A +++ V+ R++ + G++IGKGG+ I+ ++ GA I V G +P
Sbjct: 87 EDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAGDMLPNS 146
Query: 229 DERLITVTASEGPESRY----------SPAQKAVVLVFSRLIEGTSEKG-LDFSSNK--- 274
ER +TV+ + S+ SP + A + R GTS G + F+ +
Sbjct: 147 TERAVTVSGTPDAISQCVYHICCVMLESPPKGATIPYKPRPASGTSTSGPVVFAGGQLTK 206
Query: 275 --------------GLLVNA----------------------RLVVASNQVGCLLGKGGT 298
G + A L + + +GC++GKGG
Sbjct: 207 LHQLALQQTPYITPGTTLPAALATQFGVQTASQPGNPSSQTHELTIPNELIGCIIGKGGC 266
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
I+E+R+ +G +I+I Q DR V I+G
Sbjct: 267 KINEIRQCSGATIKIAGMQE----GSTDRQVTITG 297
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG +++ D L + +R + I+G + + V + + ++ G R +
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 366 TSS 368
+SS
Sbjct: 183 SSS 185
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 63/252 (25%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDART--QQQEVSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T + V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMP-----------------ECDERLITVTASEGPES---RYSPAQ 249
++ GA + V G +P EC +++ V P+ Y P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 250 KAVVLVFS----RLIEGTS-----------------------------EKGLDFSSNKGL 276
+ ++F+ I+G GLD S+
Sbjct: 183 SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT-- 240
Query: 277 LVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFS 336
+ L + ++ +GC++G+ G I+E+R+++G I+I + DR V I+G +
Sbjct: 241 -TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTITGSAA 295
Query: 337 KVKDAVYNVTGR 348
+ A Y + R
Sbjct: 296 SISLAQYLINVR 307
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 306 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 364
Query: 342 VY 343
Y
Sbjct: 365 QY 366
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 70/263 (26%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMP-----------------ECDERLITVTASEGPES---RYSPAQ 249
++ GA + V G +P EC +++ V P+ Y P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 250 KAVVLVFS----RLIEG----------------------------TSEKGLDFSSNK--- 274
+ ++F+ I+G T G++ SS +
Sbjct: 183 SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKG 242
Query: 275 ---GLLVNAR-----LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GL +A+ L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 243 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 298
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 299 RQVTITGSAASISLAQYLINVRL 321
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + +++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 58/235 (24%)
Query: 169 LESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATM 225
LE D +++ T + V+ R++ + G++IGKGG I+ ++ GA + V G +
Sbjct: 79 LEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 138
Query: 226 PECDERLITVTA--------------------SEGPESRYSPAQKAVVLVFS-------- 257
P ER IT+ +G Y P + ++F+
Sbjct: 139 PNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQ 198
Query: 258 --------------RLIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLG 294
+L S + S N G + L + ++ +GC++G
Sbjct: 199 GQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIG 258
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+ G I+E+R+++G I+I + NDR V I+G + + A Y + RL
Sbjct: 259 RQGAKINEIRQMSGAQIKIAN----PVEGSNDRQVTITGSTASISLAQYLINVRL 309
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 60/260 (23%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMPECDERLITV--------------------TASEGPESR----Y 245
++ GA + V G +P ER IT+ T S+ P Y
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 246 SPAQKAVVLVFS----RLIEGT-------------------------SEKGLDFSSNKGL 276
P + ++F+ I+G G S +
Sbjct: 183 RPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDAST 242
Query: 277 LVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFS 336
L + +N +GC++G+ G I+E+R+++G I+I + + R V I+G +
Sbjct: 243 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP----VEGSSGRQVTITGSAA 298
Query: 337 KVKDAVYNVTGRLRDNHFSG 356
+ A Y + RL G
Sbjct: 299 SISLAQYLINARLSSEKGMG 318
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ ER++ +T + P
Sbjct: 425 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGT--P 481
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E FS+ + + + + V S+ G ++GKGG ++
Sbjct: 482 EAQF----KAQGRIFGKLKEENF-----FSAKEEVKLETHIKVPSSAAGRVIGKGGKTVN 532
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ+ END V V+ISG F
Sbjct: 533 ELQNLTSAEVIVPRDQIP---DENDEVFVKISGHF 564
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R +QQ+ RIL VGA+IGK G I+ + + + + + R A+E
Sbjct: 182 RPRQQDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDI--------HRKENAGAAE 233
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P + +S + R+I +K + + + +++ ++ VG L+GK G
Sbjct: 234 KPITIHSTPEGCSSAC--RMILDIMQKEAN-ETKTNEEIPLKILAHNSLVGRLIGKEGRN 290
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ ++ + TGT I I S Q L I +R + + G A + +L++ +
Sbjct: 291 LKKIEEETGTKITISSLQDL-TICNPERTITVKGSLEACCKAEVEIMKKLKEAY 343
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ ER++T+T + E+ +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGAT--EAIF 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+A ++ + E S + S V RLV +Q G L+GKGG+ I E+R+
Sbjct: 73 ----RAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG +++ D L +R V ISG + V ++
Sbjct: 129 TTGAQVQVAGDMLPD---STERAVTISGTPQAITQCVRHI 165
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS 238
T + V+ R++ + G++IGKGG+ I+ ++ GA + V G +P+ ER +T++ +
Sbjct: 96 TSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGT 154
>gi|169622886|ref|XP_001804851.1| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
gi|160704873|gb|EAT77860.2| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
Length = 357
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 169 LESDRVATLDARTQQQ----EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT 224
L D A + RT+Q+ +++ R + S+ + G +IGK G + L+ E G V
Sbjct: 24 LNMDGEADVVPRTEQEYADSQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKV 83
Query: 225 MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGL------DFSSNKGLLV 278
+ +R+++VT S S KA LV L++G G+ D + + L V
Sbjct: 84 VQGVHDRVLSVTGS------LSGISKAYGLVAKGLLDGAPAMGMGGVVRTDGTHQRKLTV 137
Query: 279 NA-RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
A RL+++ NQ+G ++G+ G I +++ +G +R+++ + + S +R+V++ G S
Sbjct: 138 TAIRLLISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQS-TERIVEVQGSPSS 194
Query: 338 VKDAVYNVTGRLRDNHFSG 356
++ A++ + L D+H G
Sbjct: 195 IEKAIWEIGKCLIDDHERG 213
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 25/218 (11%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT +
Sbjct: 224 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGA---- 279
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
S +A LV L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 280 --LSGTARAYALVAKGLLEGAPQMGMGGIVSNNGTH-PIRLLISHNQMGTIIGRQGLKIK 336
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT---L 358
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT L
Sbjct: 337 HIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTIL 393
Query: 359 NTARTRST-----------SSVLTETSPYSRLKDPASF 385
RS+ +S + PY+R + A F
Sbjct: 394 YNPAVRSSVGSGSIQHNGGNSDSYNSRPYNRTGNGADF 431
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 17/153 (11%)
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
+VG++IGK G I++ + E+GA I++ + C ER++TVT + S KA L+
Sbjct: 5 EVGSIIGKKGEIVKRFREESGAKINI--SDGSCPERIVTVTGNT------SSIFKAFTLI 56
Query: 256 FSRLIEGTSEKGLDFSSNKG---LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIR 312
+ E S+ F+ G + RL+V ++Q G L+GKGG+ I E+R VTG
Sbjct: 57 CKKFEEWCSQ----FNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRLYV 112
Query: 313 IISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
++ ++L + +R V ISG + +Y++
Sbjct: 113 HVASEMLP--NSTERAVTISGTCDAITQCIYHI 143
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 282 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGSTDRTITISGNPDSVALA 340
Query: 342 VY--NVTGRLRDNHFSG 356
Y N++ L+ + G
Sbjct: 341 QYLINMSVELQKANLEG 357
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 67/257 (26%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMP-----------------ECDERLITV---TASEGPESR----Y 245
++ GA + V G +P EC +++ V T S+ P Y
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 182
Query: 246 SPAQKAVVLVFS----RLIEGTS-----------------------------EKGLDFSS 272
P + ++F+ I+G GLD S+
Sbjct: 183 RPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASA 242
Query: 273 NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQIS 332
+ L + ++ +GC++G+ G I+E+R+++G I+I + DR V I+
Sbjct: 243 QT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTIT 295
Query: 333 GEFSKVKDAVYNVTGRL 349
G + + A Y + RL
Sbjct: 296 GSAASISLAQYLINVRL 312
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 63/253 (24%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMP-----------------ECDERLITVTASEGPES---RYSPAQ 249
++ GA + V G +P EC +++ V P+ Y P
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKP 182
Query: 250 KAVVLVFS----RLIEGTS-----------------------------EKGLDFSSNKGL 276
+ ++F+ I+G GLD S+
Sbjct: 183 SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT-- 240
Query: 277 LVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFS 336
+ L + ++ +GC++G+ G I+E+R+++G I+I + DR V I+G +
Sbjct: 241 -TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTDRQVTITGSAA 295
Query: 337 KVKDAVYNVTGRL 349
+ A Y + RL
Sbjct: 296 SISLAQYLINVRL 308
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTTSI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
G +++ D L + +R + ++G + + V +
Sbjct: 126 SAGAQVQVAGDMLP---NSTERAITVAGTPQSIIECVKQI 162
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 67/229 (29%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMP------------- 226
T + V+ R++ + G++IGKGG I+ ++ AGA + V G +P
Sbjct: 93 TSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTP 152
Query: 227 ----ECDERLITVTASEGPES---RYSPAQKAVVLVFS----------------RLIEGT 263
EC +++ V P+ Y P ++F+ + EG
Sbjct: 153 QSIIECVKQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGP 212
Query: 264 S-----------------------EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
S + G+D S+ G + L + ++ +GC++G+ G I
Sbjct: 213 SLTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTG---SHELTIPNDLIGCIIGRQGAKI 269
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+E+R+++G I+I + DR V I+G + + A Y + RL
Sbjct: 270 NEIRQMSGAQIKIANP----VEGSTDRQVTITGSHASISLAEYLINARL 314
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT------ 75
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 76 SAIFAAFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 NTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 328
Query: 342 VYNVTGRL 349
Y + R+
Sbjct: 329 QYLINMRI 336
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 150 LTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIR 209
+T A + I++ +A+ L+ R A + R QQQ+ + SND +G +IGKGGT I
Sbjct: 234 MTPASTGGINH-TALAALAGSQLRTANAN-RAQQQQHEMTV--SNDLIGCIIGKGGTKIA 289
Query: 210 ALQSEAGAFISVGATMPECDERLI-----TVTASEGPES 243
++ +GA I + C+ER T+T S P+S
Sbjct: 290 EIRQISGAMIRIS----NCEEREGGNTDRTITISGNPDS 324
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 60/251 (23%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMPECDERLITVTASEGPES------------------------RY 245
++ GA + V G +P ER IT+ P+S R
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGI--PQSIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 246 SPAQKAVVLVFSRLIE----------------GTSEKGLDFSSNK------GLLVNAR-- 281
P+ V+ +L + T G++ SS + GL +A+
Sbjct: 181 KPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTT 240
Query: 282 ---LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV 338
L + ++ +GC++G+ G I+E+R+++G I+I + DR V I+G + +
Sbjct: 241 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP----VEGSTDRQVTITGSAASI 296
Query: 339 KDAVYNVTGRL 349
A Y + RL
Sbjct: 297 SLAQYLINVRL 307
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 26/213 (12%)
Query: 127 FGAVSQE--ILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQ 184
A++Q+ ++P L+++ L +S L P ++ + + P S E + A +Q
Sbjct: 358 IAAINQQANLIPGLNLNALGIFSSGLPVLPPAA-GPPTRIPPSSPEMSQSAP------EQ 410
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPES 243
EV + + VGA+IGK G I+ L AGA I + A P+ ER++ +T + PE+
Sbjct: 411 EVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGT--PEA 467
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
++ KA +F +L E FS+ + + + + V S+ G ++GKGG ++E+
Sbjct: 468 QF----KAQGRIFGKLKEENF-----FSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNEL 518
Query: 304 RKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+ +T + + DQ END V V+ISG F
Sbjct: 519 QNLTSAEVIVPRDQ---TPDENDEVFVKISGHF 548
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R +Q + R+L VGA+IGK G I+ + + + + + R A+E
Sbjct: 193 RPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI--------HRKENAGAAE 244
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P + +S + R+I +K + + + +++ ++ VG L+GK G
Sbjct: 245 KPITIHSTPEGCSAAC--RMILDIMQKEAN-ETKTTEDIPLKILAHNSLVGRLIGKEGRN 301
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ ++ + TGT I I S Q L I +R + + G A +T +LR+ +
Sbjct: 302 LKKIEEDTGTKITISSLQDL-TIYNPERTITVKGSIDACCKAEVEITKKLREAY 354
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 59/250 (23%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMPECDERLITVTASEGPES------------------------RY 245
++ GA + V G +P ER IT+ P+S R
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGI--PQSIIECVKQICVVMLESPPKGVTIPYRP 180
Query: 246 SPAQKAVVLVFSRLIE----------------GTSEKGLDFSSNK-----GLLVNAR--- 281
P+ V+ +L + T G++ SS + GL +A+
Sbjct: 181 KPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTS 240
Query: 282 --LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + ++ +GC++G+ G I+E+R+++G I+I + DR V I+G + +
Sbjct: 241 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP----VEGSTDRQVTITGSAASIS 296
Query: 340 DAVYNVTGRL 349
A Y + RL
Sbjct: 297 LAQYLINVRL 306
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 155 SSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSE 214
SS+S S RP + A +R Q V R+L + GAVIGKGG I++L+++
Sbjct: 17 GSSLSPSSCKRPAEDHDEEQAFKRSRNNDQCVELRLLLQSKNAGAVIGKGGKNIKSLRTD 76
Query: 215 AGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE----KGLD 269
A +SV ++ P ER++++ A + + + S+++ E KG D
Sbjct: 77 YNASVSVPDSSGP---ERILSINAD----------IETIGDILSKIVPTLEEYQHYKGKD 123
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
F R++V +Q G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 124 FD------CELRMLVHQSQAGSIIGVKGVKIKELRESTQTTIKLFQEC---CPHSTDRVV 174
Query: 330 QISGEFSKVKDAVYNVTGRLRDNHFSG 356
+ G+ +V + + + G L ++ G
Sbjct: 175 LLGGKPDRVVECIKIIMGLLSESPVKG 201
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 347 GPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 402
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 403 QDQIQNAQY 411
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 403
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 32/192 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q S +I N +VG +IGKGG I+ LQ ++GA I V M P RL+ +T +
Sbjct: 110 QGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTS- 168
Query: 241 PESRYSPAQKAVVLVFSRLIEG---------TSEKGLD-FSSNKGLLVNARLVVASNQVG 290
+ A+K + V + G T + G D FS + + +N+VG
Sbjct: 169 --DAIATAEKLIKEVLAEAESGGNGLVTRRMTGQGGADEFS----------MKIPNNKVG 216
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK------DAVYN 344
++GKGG I M+ TG I++I L + +R ++I G +++ D++ +
Sbjct: 217 LIIGKGGETIKSMQATTGARIQVIPLHLPPGDTSTERTLKIEGTSEQIESAKQLVDSILS 276
Query: 345 VTGRLRDNHFSG 356
RLR+ SG
Sbjct: 277 GENRLRNPSMSG 288
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + ++GA I++ C ER++TVT +
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDG--SCPERIVTVTGTT------ 63
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ + F+ + + E + + V RLVV ++Q G L+GKGG+ I E+R+
Sbjct: 64 ----ECIHKAFTMICKKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 119
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG + + N+
Sbjct: 120 TTGASIQVASEMLP---NSTERAVTVSGTADAITLCIQNI 156
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVV 253
+VG++I K G ++ ++ E+GA S+ C ER+IT+ GP + KA
Sbjct: 3 GKEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLA---GPTNAIF---KAFA 54
Query: 254 LVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
++ +L EG S + ++ V RLVV ++Q G L+GKGG I E+R+ TG +++
Sbjct: 55 MIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 114
Query: 314 ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN-------HFSGTLNTARTRST 366
D L + + + I+G + + V + + + H G T R + +
Sbjct: 115 AGDMLP---NSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKGLTITYRPKPS 171
Query: 367 SSVLTETSP---YSRLKDPASFG-VHSSVAVSHDFSQPPL 402
SS++ YS D ASF S+ ++ D PPL
Sbjct: 172 SSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPL 211
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 278 VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFS 336
V RL+V SNQ+GC++GKGG II +R +G IRI+ D L C ++ ++QIS E
Sbjct: 283 VTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISREPF 342
Query: 337 KVKDAVYNVTGRLRDN 352
V+ +Y + RL DN
Sbjct: 343 IVRKILYQIASRLHDN 358
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPEC 228
+ +V+ R+L ++++G VIGKGG II++++SE+GA I + +P C
Sbjct: 279 EANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSC 327
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V+++ +GC++GKGGT I+E+R+++G IR IS+ + DR + ISG V A
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGNTDRTITISGNPDSVALA 330
Query: 342 VY 343
Y
Sbjct: 331 QY 332
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 127 FGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEV 186
+ +QE+ + + + + + A + I++ +A+ L+ R A R QQQ+
Sbjct: 211 YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQ- 269
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI-----TVTASEGP 241
+ SND +G +IGKGGT I ++ +GA I + C+ER T+T S P
Sbjct: 270 -HEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI----SNCEEREGGNTDRTITISGNP 324
Query: 242 ES 243
+S
Sbjct: 325 DS 326
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTASEGPESRYS 246
FR++ + DKVG +IG+ G I+ L + A + V A R++ ++A+E ++
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEESQAELP 158
Query: 247 PAQKAVVLVFSRLIEGTSEKGLD--FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
PA A + +F I + D S + +A+L+V S Q L+GK G I ++
Sbjct: 159 PAMDAAIKIFMH-INDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIGKQGVRIKSIQ 217
Query: 305 KVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ TG +++II +LL ++R+V I G KV A+ +V G LR
Sbjct: 218 ETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVLR 264
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T+P++ + +P +E L R + V +L +VG++IGK G ++ +
Sbjct: 18 TSPAAPVCGGMFWKPGCME-----LLGCRGSRAAVGPELLW---EVGSIIGKKGETVKKM 69
Query: 212 QSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFS 271
+ E+GA I++ C ER++T+T GP KA ++ + E +
Sbjct: 70 REESGARINISEG--NCPERIVTIT---GPTDAIF---KAFAMIAYKFEEDIINSMSNSP 121
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQI 331
+ V RLVV ++Q G L+GKGG+ I E+R+ TG +++ D L + +R V I
Sbjct: 122 ATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDML---PNSTERAVTI 178
Query: 332 SGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSS 368
SG + V + + ++ G R + S+
Sbjct: 179 SGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST 215
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 89 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 148
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 149 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 181
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 32/232 (13%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 37 KEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 95
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ +L+ E S+ RLVV ++ G ++GKGG+
Sbjct: 96 -----LFDEVIKAMELILEKLLAEGEE-----SNEAEARPKVRLVVPNSSCGGIIGKGGS 145
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V ++G A+Y + +L D H+
Sbjct: 146 TIKSFIEDSHAGIK-ISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPN 204
Query: 358 LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWS 409
L++ PY+ L P+ + V V + Q P N+
Sbjct: 205 LSSPF------------PYAGLGFPS----YPGVPVGYMIPQVPYNNAVNYG 240
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ ER++ +T + P
Sbjct: 436 EQEVVY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGT--P 492
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E FS+ + + + + V S+ G ++GKGG ++
Sbjct: 493 EAQF----KAQGRIFGKLKEENF-----FSAKEEVKLETHIKVPSSAAGRVIGKGGKTVN 543
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ END V V+ISG F
Sbjct: 544 ELQNLTSAEVIVPRDQ---TPDENDEVFVKISGHF 575
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R +Q + R+L VGA+IGK G I+ + + + + + R A+E
Sbjct: 193 RPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI--------HRKENAGAAE 244
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
P + +S + R+I +K + + + +++ ++ VG L+GK G
Sbjct: 245 KPITIHSTPEGCSAAC--RMILDIMQKEAN-ETKTTEDIPLKILAHNSLVGRLIGKEGRN 301
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ ++ + TGT I I S Q L I +R + + G A +T +LR+ +
Sbjct: 302 LKKIEEDTGTKITISSLQDL-TIYNPERTITVKGSIDACCKAEVEITKKLREAY 354
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
>gi|195486812|ref|XP_002091665.1| GE12124 [Drosophila yakuba]
gi|194177766|gb|EDW91377.1| GE12124 [Drosophila yakuba]
Length = 497
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V DAV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRDTPI 169
Query: 355 SGTLNT 360
G ++
Sbjct: 170 KGAIHN 175
>gi|194881635|ref|XP_001974928.1| GG22043 [Drosophila erecta]
gi|190658115|gb|EDV55328.1| GG22043 [Drosophila erecta]
Length = 498
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V DAV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRDTPI 169
Query: 355 SGTL 358
G +
Sbjct: 170 KGAI 173
>gi|222636947|gb|EEE67079.1| hypothetical protein OsJ_24052 [Oryza sativa Japonica Group]
Length = 544
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
+ SFR+LC G +IGK G +I+A++ +GA + VG + C ER ITV+A E P +
Sbjct: 242 QFSFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQK 301
Query: 245 YSPAQKAVVLVFSRL 259
+S + AV+ +F R+
Sbjct: 302 FSMVENAVLRIFDRM 316
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 24/177 (13%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPE 242
++ R+L + G++IGKGG I L+++ A ++V P+C ER++T+ +S
Sbjct: 24 DIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV----PDCPGPERILTIISSN--- 76
Query: 243 SRYSPAQKAVVLVFSRLIEGTSE---------KGLDFSSNKGLLVNARLVVASNQVGCLL 293
A K + V L +G S +G + + V+ R++V +Q GC++
Sbjct: 77 ---DNALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCII 133
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
GKGG + E+R+ TG+ I+I + C DRVVQI+G+ + D V V L+
Sbjct: 134 GKGGLKVKELREKTGSRIKIYTSC---CPMSTDRVVQITGKPNTCSDCVREVLDLLK 187
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
S ++ D GA+IGK G IR ++ ++GA I++G DER+IT+ ++
Sbjct: 348 STQVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITINGTD 400
>gi|125558153|gb|EAZ03689.1| hypothetical protein OsI_25823 [Oryza sativa Indica Group]
Length = 610
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
+ SFR+LC G +IGK G +I+A++ +GA + VG + C ER ITV+A E P +
Sbjct: 308 QFSFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQK 367
Query: 245 YSPAQKAVVLVFSRL 259
+S + AV+ +F R+
Sbjct: 368 FSMVENAVLRIFDRM 382
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G I+ + E+GA I++ + C ER++TV+ + + +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCPERIVTVSGTT--NAIF 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
S A L+ + E S+ D + RL+V ++Q G L+GK G+ I E+R+
Sbjct: 80 S----AFTLITKKFEEWCSQFN-DAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
TG SI++ S+ L + +R V +SG ++ +Y +
Sbjct: 135 TTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM-PECDERLITVTA 237
+ + ++ R++ + G++IGK G+ I+ ++ G I V + M P ER +T++
Sbjct: 100 GKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSG 159
Query: 238 SEGPESRYSPAQKAVVLVFS-------------------RLIEGTSEKGLDFSSNKGLLV 278
S + Q +V++ S + S G++ ++ L
Sbjct: 160 S-AEQITQCIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGINHTAALAALA 218
Query: 279 NARL----------------VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCI 322
++L V+++ +GC++GKGGT I+E+R+++G IR IS+ +
Sbjct: 219 GSQLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREG 277
Query: 323 SENDRVVQISGEFSKVKDAVYNVTGRL 349
DR + ISG V A Y + R+
Sbjct: 278 GNTDRTITISGNPDSVALAQYLINMRI 304
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 150 LTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIR 209
+ A + I++ +A+ L+ R A R QQQ+ + SND +G +IGKGGT I
Sbjct: 200 MNPASTGGINHTAALAALAGSQLRTANAANRAQQQQHEMTV--SNDLIGCIIGKGGTKIA 257
Query: 210 ALQSEAGAFISVGATMPECDERLI-----TVTASEGPES 243
++ +GA I + C+ER T+T S P+S
Sbjct: 258 EIRQISGAMIRI----SNCEEREGGNTDRTITISGNPDS 292
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT GP
Sbjct: 40 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT---GP- 95
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
+A LV L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 96 --LQGTARAYALVAKGLLEGAPQMGMGGVVSNNGTH-PVRLLISHNQMGTIIGRSGLKIK 152
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT---- 357
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 153 HIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTIL 209
Query: 358 --------LNTARTRSTSSVLTETSPYSRLKDPASF 385
+ TA + PY+R + A F
Sbjct: 210 YNPAVRASVGTAPVNQNVGNGYSSRPYNRTGNGADF 245
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 24/177 (13%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPE 242
++ R+L + G++IGKGG I L+++ A ++V P+C ER++T+ +S
Sbjct: 22 DIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV----PDCPGPERILTIISSN--- 74
Query: 243 SRYSPAQKAVVLVFSRLIEGTSE---------KGLDFSSNKGLLVNARLVVASNQVGCLL 293
A K + V L +G S +G + + V+ R++V +Q GC++
Sbjct: 75 ---DNALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCII 131
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
GKGG + E+R+ TG+ I+I + C DRVVQI+G+ + D V V L+
Sbjct: 132 GKGGLKVKELREKTGSRIKIYTSC---CPMSTDRVVQITGKPNTCSDCVREVLDLLK 185
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
S ++ D GA+IGK G IR ++ ++GA I++G DER+IT+ ++
Sbjct: 346 STQVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITINGTD 398
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 42/230 (18%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDARTQQQE--VSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T V+ R++ + G++IGKGG I+
Sbjct: 63 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 211 LQSEAGAFISV-GATMPECDERLITVTASEGPESRYSPA-QKAVVLVFSRLIEGTS---- 264
++ GA + V G +P ER IT+ P+S Q VV++ + I+G
Sbjct: 123 IRESTGAQVQVAGDMLPNSTERAITIAGI--PQSIIECVKQICVVMLEAYTIQGQYAIPQ 180
Query: 265 -------------------------EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
GLD S+ + L + ++ +GC++G+ G
Sbjct: 181 PDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT---TSHELTIPNDLIGCIIGRQGAK 237
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
I+E+R+++G I+I + DR V I+G + + A Y + RL
Sbjct: 238 INEIRQMSGAQIKIAN----PVEGSTDRQVTITGSAASISLAQYLINVRL 283
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 172 DRVATLDARTQQQEVS----FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE 227
DR+++ D ++ E+S R+L +VG++IGK G ++ ++ ++ A I++
Sbjct: 10 DRMSSSDNGLEETELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEG--S 67
Query: 228 CDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASN 287
C ER+ T+T S R AV ++ +L E ++ + V RLV+ ++
Sbjct: 68 CPERITTITGSTDAVFR------AVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPAS 121
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
Q G L+GK G I E+R+ TG +++ D L + +R V +SG V DA+
Sbjct: 122 QCGSLIGKAGAKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 169
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
VA LD +Q F L ND +G +IG+ G+ I ++ +GA I +G ER +
Sbjct: 246 VAGLDTNSQNSSQEF--LVPNDLIGCIIGRQGSKISEIRQMSGAHIKIGNQTEGSAERHV 303
Query: 234 TVTAS 238
T+T +
Sbjct: 304 TITGT 308
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
Q+QEV++ + VGA+IGK G I+ L AGA I + A P+ ER++ +T +
Sbjct: 493 QEQEVAY-LFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGT-- 549
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + + V S G ++GKGG +
Sbjct: 550 PEAQF----KAQGRIFGKLKEENI-----FTGKEEVRLETHIRVPSTAAGRVIGKGGKTV 600
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
+E++ +T + + DQ +N+ VV+I G F
Sbjct: 601 NELQSLTSAEVIVPRDQTPD--EKNEVVVKICGHF 633
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
+++ ++N +G L+GK G + ++ + TGT I I S Q L I N+R + + G +
Sbjct: 343 KIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDLN-IYNNERTITVKGSLEACCN 401
Query: 341 AVYNVTGRLRDNH 353
A + +LR+ +
Sbjct: 402 AEVEIMKKLREAY 414
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 28/225 (12%)
Query: 168 SLESDR----VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
SLE D V R + V RIL + GA+IGKGG I+ L+S+ A ++V
Sbjct: 4 SLEEDNTIGDVPLKKTRGEGPNVELRILLQSKNAGAIIGKGGANIKRLRSDYNATVTV-- 61
Query: 224 TMPECD--ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR 281
P+ ER++TV A+ G A + ++ V L + K L+F R
Sbjct: 62 --PDSSGPERVLTVGANLGT------ALEILLDVIPSLEDYKRFKDLEFE------CEMR 107
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISE-NDRVVQISGEFSKVKD 340
++ +Q GC++G+GG I E+R TG I++ S +C + ++R+VQ++G+ V +
Sbjct: 108 WLIHQSQAGCVIGRGGNKIKELRDETGAQIKVYS----QCAPQSSERIVQLTGKPRVVVN 163
Query: 341 AVYNVTGRLRDNHFSGTLNTARTRSTSSVLT-ETSPYSRLKDPAS 384
++ + L+ G N + E Y++ +DP++
Sbjct: 164 SLATIFDLLQTAPPKGFNNPYDPNNFDEFYAPEYGGYTQFEDPSA 208
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
D GA+IGKGG+ IR ++ E+GA I++ M +R+IT+T S+
Sbjct: 333 DLAGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQ 377
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 20/176 (11%)
Query: 172 DRVATLDARTQQQE-----VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP 226
DR+++ DA +++ ++ R+L +VG++IGK G ++ ++ ++ A I++
Sbjct: 39 DRMSSSDAGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG-- 96
Query: 227 ECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVAS 286
C ER+ T+T S + AV ++ +L E + S V RLV+ +
Sbjct: 97 SCPERITTITGST------AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPA 150
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
+Q G L+GK GT I E+R+ TG +++ D L + +R V +SG V DA+
Sbjct: 151 SQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 199
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 120/247 (48%), Gaps = 27/247 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T G E
Sbjct: 44 QAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG--GCE 101
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
+ +A +V L+EG G+ +L+++ NQ+G ++G+ G I
Sbjct: 102 A----ISRAYAIVAQALLEGAPSLGMGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIKH 157
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLN--- 359
++ V+G +R+++ + + S +R+V++ G ++ A++ ++ L D+ GT
Sbjct: 158 IQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPDGIRAAIWEISKCLVDDWQRGTGTVLY 214
Query: 360 --TARTRSTSS-VLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGN---WSSSEG 413
RT+ S+ + TSP P++ G S ++S P + + GN +SS+ G
Sbjct: 215 NPVVRTQPGSTPAVGGTSPSY----PSTGG-----GRSQEYSSPRVLRTGNGADFSSNGG 265
Query: 414 QLRCWKR 420
R + R
Sbjct: 266 GQRPYSR 272
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G I+ ++ E+GA I++ C ER++T+T + G
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIG-- 127
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA +V ++ E + L +S + R++V + Q G L+GKGG+ I ++R+
Sbjct: 128 ----KAFNMVCNKFEE---DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIRE 180
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG SI++ S+ L +R V +SG + + V L + G+ T R +
Sbjct: 181 ATGASIQVASEMLPH---STERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 237
Query: 366 TSSVL 370
T + L
Sbjct: 238 TFNPL 242
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G I+ ++ E+GA I++ C ER++T+T + G
Sbjct: 73 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIG-- 128
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA +V ++ E + L +S + R++V + Q G L+GKGG+ I ++R+
Sbjct: 129 ----KAFNMVCNKFEE---DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIRE 181
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG SI++ S+ L +R V +SG + + V L + G+ T R +
Sbjct: 182 ATGASIQVASEMLPH---STERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 238
Query: 366 TSSVL 370
T + L
Sbjct: 239 TFNPL 243
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 32/232 (13%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 7 KEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 65
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ +L+ E S+ RLVV ++ G ++GKGG+
Sbjct: 66 -----LFDEVIKAMELILEKLLAEGEE-----SNEAEARPKVRLVVPNSSCGGIIGKGGS 115
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V ++G A+Y + +L D H+
Sbjct: 116 TIKSFIEDSHAGIK-ISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPN 174
Query: 358 LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWS 409
L++ PY+ L P+ + V V + Q P N+
Sbjct: 175 LSSP------------FPYAGLGFPS----YPGVPVGYMIPQVPYNNAVNYG 210
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESR 244
R L SN G+VIGKGG+ I QS++GA I + P +R+I V+ S
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGS------ 90
Query: 245 YSPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ KA+ LV ++L+ E +E+G D RL+V + G ++GKGG+ I
Sbjct: 91 INEILKAMELVLAKLLSELHAEEGDDVEPR----TKVRLIVPHSSCGAIIGKGGSTIKSF 146
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGTLN 359
+ + I+ IS Q ++ DR+V +SG + A + +L D H++ ++N
Sbjct: 147 IEDSQAGIK-ISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMN 202
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 202 GKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIE 261
GK G ++ ++ E+GA I++ C ER+IT+ GP + KA ++ +L E
Sbjct: 22 GKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAIF---KAFAMIIDKLEE 73
Query: 262 GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKC 321
S + ++ V RLVV ++Q G L+GKGG I E+R+ TG +++ D L
Sbjct: 74 DISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLP-- 131
Query: 322 ISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSP---YSR 378
+ +R + I+G + + V + + ++ G R + +SS + YS
Sbjct: 132 -NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYST 190
Query: 379 LKDPASFG-VHSSVAVSHDFSQPPL 402
D ASF S+ ++ D PPL
Sbjct: 191 GSDSASFPHTTPSMCLNPDLEGPPL 215
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q S ++ NDKVG +IGKGG IR LQ +GA I + M P R + + +
Sbjct: 198 QTTSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTTRPVELIGT-- 255
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSE----KGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
S S A+K + V + G S +GL + G+ + V + +VG ++G+G
Sbjct: 256 -LSSISKAEKLINAVIAEADAGGSPSLVARGLPSAQTAGVGDQIEMQVPNEKVGLIIGRG 314
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
G I ++ +G I++I + + +R V+++G+ +++
Sbjct: 315 GDTIKALQAKSGARIQLIPQHPPEGDASKERTVRVTGDRKQIE 357
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 5 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 59
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 60 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 116
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 117 STGAQVQVAGDMLP---NSTERAITIAG 141
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ ER++T+T GP
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTIT---GPT--- 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
+ + FS + + E +N + V RLV +Q G L+GKGG+ I
Sbjct: 69 ----EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L +R V ISG + V ++
Sbjct: 125 EIRETTGAQVQVAGDMLPD---STERAVTISGTPQAITQCVRHI 165
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLDAR--TQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ I ++ E D A + T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P+ ER +T++ +
Sbjct: 122 KIKEIRETTGAQVQVAGDMLPDSTERAVTISGT 154
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 11/150 (7%)
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
+VG++IGK G ++ ++ E+GA I++ + C ER+IT+T GP + KA ++
Sbjct: 5 EVGSIIGKKGESVKRIREESGARINI--SEGNCPERIITLT---GPTNAIF---KAFAMI 56
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+L E + + ++ V RLVV + Q G L+GKGG I E+R+ TG +++
Sbjct: 57 IDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG 116
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNV 345
D L + +R + I+G V + V +
Sbjct: 117 DMLP---NSTERAITIAGVPQSVTECVKQI 143
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ + GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 229 FAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 288
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 289 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 328
>gi|395516948|ref|XP_003762645.1| PREDICTED: poly(rC)-binding protein 4 [Sarcophilus harrisii]
Length = 338
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S G
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEG--SCPERITTITGSTGA---- 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 72 --VFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 207 IIRALQSEAGAFISVGATMPECDERLITV-------TASEGPESRYSPAQKAVVLVFSRL 259
II+ L+ + I + T+ C+E ++T+ A + + SP Q A+ V ++
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKV 68
Query: 260 IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQL 318
+ SEK + V +L+V S+Q+GC++GKGG II + +G I I+ +D L
Sbjct: 69 V---SEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHL 125
Query: 319 LKCISENDRVVQISGE 334
L C D +VQISGE
Sbjct: 126 LSCALSFDELVQISGE 141
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 30/40 (75%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+ +V+ ++L ++D++G VIGKGG II+ + SE+GA I +
Sbjct: 80 EASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYI 119
>gi|256083129|ref|XP_002577802.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230296|emb|CCD76467.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R + +V R L S G +IGKGG I+ ++ E SV T+P+ + ER++ +
Sbjct: 3 RGEGPKVELRFLISTKAAGVIIGKGGENIKKIREE----YSVKVTIPDSNGPERVLVLDG 58
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G +V+ +F +E SN+ V+ RL+V +Q GC++G+ G
Sbjct: 59 DLG----------SVIEIFRENLE-------KMQSNRDDGVDLRLLVHQSQAGCVIGRAG 101
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
I E+R+ +G + L C DRV+Q+ G+ KV D + ++
Sbjct: 102 YKIKELREQSGLHTLKVYQMLCPC--STDRVIQLVGDVGKVLDCLRSI 147
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+ A +++ C ER+IT+T S +S +
Sbjct: 27 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST--DSVF 82
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+A ++ +L E + + + + V RLV+ ++Q G L+GKGG I E+R+
Sbjct: 83 ----RAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE 138
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG I++ D L + +R V ISG V V + + ++ G
Sbjct: 139 STGAQIQVAGDLL---PNSTERGVTISGNQDSVIQCVKLICTVILESPPKGA-------- 187
Query: 366 TSSVLTETSPYSRLKDPASFGVHSS-VAVSHDFSQPPLTQDGNWSSSEGQL 415
T PY PA+ + + V + DF+ PL +S ++G L
Sbjct: 188 -------TIPYRPTPSPAALLIAGNQVFEASDFAPHPL-----YSVTQGGL 226
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
AQ A ++ +L+ G+D +S + L++ ++ +G ++G+ GT I+E+R+V+
Sbjct: 261 AQPASTIMPGKLLLHFLPSGMDSTSQ----TSQELLIPNDLIGSIIGRQGTKINEIRQVS 316
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G I+I S + +DR V I+G + A Y +T L
Sbjct: 317 GAQIKIGS----QLDGTSDRHVTITGTPVSINLAQYLITSCL 354
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 26/254 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q S +I N +VG +IGKGG I+ LQ ++GA I V M P R++ + +
Sbjct: 133 QGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTP- 191
Query: 241 PESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ + A++ + V S G S + L S V + + +N+VG ++GKGG
Sbjct: 192 --DQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSGSEQFV---MKIPNNKVGLVIGKGG 246
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT-----GRLRDN 352
I M+ TG I++I L + +R +QI G +++ A V R R++
Sbjct: 247 ETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISENRARNS 306
Query: 353 HFSGTLNTA--RTRSTSSVLTETSPYSRLKDP----ASFGVHSSVAVSHDFSQPPLTQDG 406
SG N + R SS +P ++ P G +S+ + ++ SQPP Q
Sbjct: 307 GMSGGYNQQGYQARPPSSWGPPGAP--PMQQPNYGYGQQGGYSAPSSQYNISQPPY-QGY 363
Query: 407 NWSSSEGQLRCWKR 420
+ +S G W +
Sbjct: 364 SQPASGGYASNWDQ 377
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRY 245
R L SN G+VIGKGG+ I QS++GA I + P +R+I V+ +
Sbjct: 39 RFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGA------I 92
Query: 246 SPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
+ +AV L+ S+L+ E SE D RL+V + G ++GKGG I
Sbjct: 93 NEVLRAVELILSKLLSELHSEDDNDVEPK----TKVRLIVPNGSCGGIIGKGGATIRSFI 148
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGTLNTART 363
+ + I+ IS Q +NDR+V ++G + + + +L D H+S ++++ T
Sbjct: 149 EESQAGIK-ISPQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSHSMSSPFT 207
Query: 364 RSTSSV 369
S + V
Sbjct: 208 YSGAYV 213
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT GP
Sbjct: 40 QSMLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT---GP- 95
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
+ +A LV L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 96 --LNGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHP-VRLLISHNQMGTIIGRQGLKIK 152
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT---L 358
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT L
Sbjct: 153 HIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTIL 209
Query: 359 NTARTRSTSSVLTETS-------------PYSRLKDPASF 385
R++ TS PY+R + A F
Sbjct: 210 YNPAVRASVGTTPSTSTMNQSVGNGYNSRPYNRTGNGADF 249
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 39/199 (19%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
FR+LC+ +VG +IG+ G +R + +E GA + V A+ C ER + + A P +R P
Sbjct: 18 FRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFA---PRARDGP 74
Query: 248 AQ--------KAVVLVFSRLIEGTSEK-------------------------GLDFSSNK 274
+ VV +R T ++ G D +
Sbjct: 75 GDTCAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRST 134
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRK-VTGTSIRIIS-DQLLKCISENDRVVQIS 332
V RL+V + Q G L+GKGG I E+RK G + + Q+ C + DRVV+I
Sbjct: 135 -AHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIH 193
Query: 333 GEFSKVKDAVYNVTGRLRD 351
G+ V+ A V L+D
Sbjct: 194 GKPKDVRVAADAVFESLKD 212
>gi|195336152|ref|XP_002034707.1| GM22026 [Drosophila sechellia]
gi|194126677|gb|EDW48720.1| GM22026 [Drosophila sechellia]
Length = 345
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +S V S+
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVS--------------VDDSQ 62
Query: 240 GPES--RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
GPE + S ++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 63 GPERTIQISADIESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGG 114
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 115 QKIKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDT 167
Query: 353 HFSGTLNT 360
G ++
Sbjct: 168 PIKGAIHN 175
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 55/294 (18%)
Query: 161 VSAVRPLSLESDRVATLDARTQ-------------QQEVSF----RILCSNDKVGAVIGK 203
V+ PLS + R + + Q QQ S+ +I N +VG +IGK
Sbjct: 44 VTGAPPLSYDPKRTKSDNGAPQSGFDSYDLKPQYSQQGGSYGSSKKIEIPNGRVGVLIGK 103
Query: 204 GGTIIRALQSEAGAFISVGATM---PECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I+ LQ ++GA I V M P R++ + + P++ S A L+ L
Sbjct: 104 GGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGT--PDAVSS----AEKLINEVLA 157
Query: 261 EGTSEKGLDFSSNKGLLVNAR-----LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
E +E G + ++ + + + +N+VG ++GKGG I M+ TG I++I
Sbjct: 158 E--AEAGASVGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKGMQASTGARIQVIP 215
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAVYNV----TG--RLRDNHFSG--TLNTARTRSTS 367
+ +R ++I G +++ A V TG RLR++ SG T ++R S
Sbjct: 216 LHPPPGDTSTERTLKIDGTPDQIESAKQLVNQILTGENRLRNSGNSGGYTQQGYQSRPPS 275
Query: 368 SVLTETSPYSRLKDPASFGV-----HSSVAVSHDFSQPPLT-----QDGNWSSS 411
S +P + A +G +S + ++ QPP T Q G +S++
Sbjct: 276 SWAPPAAPVQQ----AGYGYGQPGSYSGPSPQYNTPQPPYTGYPPQQPGGYSAN 325
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ ER++T+T GP
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTIT---GPT--- 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
+ + FS + + E +N + V RLV +Q G L+GKGG+ I
Sbjct: 69 ----EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ TG +++ D L +R V ISG + V ++
Sbjct: 125 EIRETTGAQVQVAGDMLPD---STERAVTISGTPQAITQCVRHI 165
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLDAR--TQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ I ++ E D A + T + V+ R++ + G++IGKGG+
Sbjct: 62 VTITGPTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGS 121
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P+ ER +T++ +
Sbjct: 122 KIKEIRETTGAQVQVAGDMLPDSTERAVTISGT 154
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVV 253
+VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP + KA
Sbjct: 3 GKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAIF---KAFA 54
Query: 254 LVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+ TG +++
Sbjct: 55 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 114
Query: 314 ISDQLLKCISENDRVVQISG 333
D L + +R + I+G
Sbjct: 115 AGDMLP---NSTERAITIAG 131
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 66/250 (26%)
Query: 153 APSSSISYVSAVRPLSLESDRVATLDART--QQQEVSFRILCSNDKVGAVIGKGGTIIRA 210
P+++I A+ LE D +++ T + V+ R++ + G++IGKGG I+
Sbjct: 44 GPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 103
Query: 211 LQSEAGAFISV-GATMPECDERLITV--------------------TASEGPESR----Y 245
++ GA + V G +P ER IT+ T S+ P Y
Sbjct: 104 IRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPY 163
Query: 246 SPAQKAVVLVFS----RLIEG----------------------------TSEKGLDFSSN 273
P + ++F+ I+G T GLD S+
Sbjct: 164 RPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGLDASAQ 223
Query: 274 KGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+ L + ++ +GC++G+ G I+E+R+++G I+I + DR V I+G
Sbjct: 224 T---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP----VEGSTDRQVTITG 276
Query: 334 EFSKVKDAVY 343
+ + A Y
Sbjct: 277 SAASISLAQY 286
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 14/173 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q + R L +IGKGG+ + ++ ++GA I+V ++P ER++ VT GP
Sbjct: 120 QNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVT---GP-- 174
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISE 302
AV F ++ +++ + S G V + ++ ++++G L+GK G+ I E
Sbjct: 175 -----LDAVAKAFGLIVRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKE 229
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS 355
+++ +G + S+ LL +E RV+ +SG + A Y V L ++H S
Sbjct: 230 IQEASGAKLH-ASEGLLPGSTE--RVLNVSGVADAIHIATYYVGNSLLNSHPS 279
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRII--------SDQLLKCISENDRVVQISG 333
+ ++ VG ++GKGG I+E+R V+G I+I+ ++ +SE +R+V I+G
Sbjct: 329 FYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERMVTITG 388
Query: 334 EFSKVKDAVYNVTGRL 349
+ ++ AV + R+
Sbjct: 389 GIANIQMAVQLLASRI 404
>gi|256083131|ref|XP_002577803.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230295|emb|CCD76466.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 322
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R + +V R L S G +IGKGG I+ ++ E SV T+P+ + ER++ +
Sbjct: 3 RGEGPKVELRFLISTKAAGVIIGKGGENIKKIREE----YSVKVTIPDSNGPERVLVLDG 58
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G +V+ +F +E SN+ V+ RL+V +Q GC++G+ G
Sbjct: 59 DLG----------SVIEIFRENLE-------KMQSNRDDGVDLRLLVHQSQAGCVIGRAG 101
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
I E+R+ +G + L C DRV+Q+ G+ KV D + ++
Sbjct: 102 YKIKELREQSGLHTLKVYQMLCPC--STDRVIQLVGDVGKVLDCLRSI 147
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS 238
+++ R L SN G +IGKGG+ I QS++GA I + + P ++R+I V+
Sbjct: 45 KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG- 103
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ LV +L+ E S+ RLVV ++ G ++GKGG
Sbjct: 104 -----LFDEVVKAMELVLEKLLSEGEE-----SNEAEARPKFRLVVPNSSCGGIIGKGGA 153
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + I+ IS Q + +DR+V I+G + A++ + +L D H+
Sbjct: 154 TIKSFIEDSHAGIK-ISPQDNNFVGLHDRLVTITGPLNSQMRAIHLILSKLSEDVHYPPN 212
Query: 358 LNT 360
L++
Sbjct: 213 LSS 215
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 269 DFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRV 328
D +K + R +V++ GC++GKGG+ I++ + +G I++ NDR+
Sbjct: 40 DHEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEF-FPGTNDRI 98
Query: 329 VQISGEFSKVKDAV 342
+ +SG F +V A+
Sbjct: 99 IMVSGLFDEVVKAM 112
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 14/185 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G I+ ++ E+GA I++ C ER++T+T + G
Sbjct: 76 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIG-- 131
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA +V ++ E + L +S + R++V + Q G L+GKGG+ I ++R+
Sbjct: 132 ----KAFNMVCNKFEE---DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIRE 184
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRS 365
TG SI++ S+ L +R V +SG + + V L + G+ T R +
Sbjct: 185 ATGASIQVASEMLPH---STERAVTLSGTADAINLCMTQVCQILLEAPPKGSTITYRPKP 241
Query: 366 TSSVL 370
T + L
Sbjct: 242 TFNPL 246
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 14/148 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G I+ ++ E+GA I++ C ER++T+T + G
Sbjct: 74 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIG-- 129
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA +V ++ E + L +S + R++V + Q G L+GKGG+ I ++R+
Sbjct: 130 ----KAFNMVCNKFEE---DMLLLPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIRE 182
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG SI++ S+ L +R V +SG
Sbjct: 183 ATGASIQVASEML---PHSTERAVTLSG 207
>gi|226470354|emb|CAX70457.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 370
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 25/168 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R + +V R L S G +IGKGG I+ ++ E SV T+P+ + ER++ +
Sbjct: 3 RGEGPKVELRFLISTKAAGVIIGKGGENIKKIREE----YSVKVTIPDSNGPERVLVLDG 58
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G +++ +F +E +N+ V+ RL+V +Q GC++G+GG
Sbjct: 59 DLG----------SIIEIFRENLE-------KMQNNRDEGVDLRLLVHYSQAGCVIGRGG 101
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
I E+R+ +G + L C S DRV+Q+ G+ KV + + ++
Sbjct: 102 YKIKELREQSGLHTLKVYQML--CPSSTDRVIQLVGDVGKVLNCLQSI 147
>gi|160773967|gb|AAI55088.1| Igf2bp2 protein [Danio rerio]
Length = 261
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ +R++ +T P
Sbjct: 87 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGP--P 143
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F++ + + + + V S+ G ++GKGG ++
Sbjct: 144 EAQF----KAQGRIFGKLKEENF-----FTAKEEVKLETHIKVPSSAAGRVIGKGGRTVN 194
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF-------SKVKDAVYNVTGRLRDNH 353
E++ +T + + DQ END V V+ISG F K+++ + V + H
Sbjct: 195 ELQNLTSAEVIVPRDQ---TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK-QQEQKH 250
Query: 354 FSGTLNTARTR 364
G T R++
Sbjct: 251 QQGAPTTPRSK 261
>gi|256083127|ref|XP_002577801.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230297|emb|CCD76468.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R + +V R L S G +IGKGG I+ ++ E SV T+P+ + ER++ +
Sbjct: 3 RGEGPKVELRFLISTKAAGVIIGKGGENIKKIREE----YSVKVTIPDSNGPERVLVLDG 58
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G +V+ +F +E SN+ V+ RL+V +Q GC++G+ G
Sbjct: 59 DLG----------SVIEIFRENLE-------KMQSNRDDGVDLRLLVHQSQAGCVIGRAG 101
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
I E+R+ +G + L C DRV+Q+ G+ KV D + ++
Sbjct: 102 YKIKELREQSGLHTLKVYQMLCPC--STDRVIQLVGDVGKVLDCLRSI 147
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++GA I++ C ER++T
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTXXXXX------ 67
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ + E + + V RLVV ++Q G L+GKGG+ I EMR+
Sbjct: 68 XXIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 128 STGAQVQVAGDMLP---NSTERAVTISG 152
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ L + ++ +GC++G+ GT I+E+R+++G I+I + ++
Sbjct: 258 GLDASNQAS---THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME----GSSE 310
Query: 327 RVVQISGEFSKVKDAVYNVTGRLRD 351
R + I+G + + A Y + R RD
Sbjct: 311 RQITITGTPANISLAQYLINARFRD 335
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTASE 239
T + V+ R++ + G++IGKGG+ I+ ++ GA + V G +P ER +T++ +
Sbjct: 95 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGA- 153
Query: 240 GPES 243
PE+
Sbjct: 154 -PEA 156
>gi|256083125|ref|XP_002577800.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|353230298|emb|CCD76469.1| putative heterogeneous nuclear ribonucleoprotein k [Schistosoma
mansoni]
Length = 371
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R + +V R L S G +IGKGG I+ ++ E SV T+P+ + ER++ +
Sbjct: 3 RGEGPKVELRFLISTKAAGVIIGKGGENIKKIREE----YSVKVTIPDSNGPERVLVLDG 58
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G +V+ +F +E SN+ V+ RL+V +Q GC++G+ G
Sbjct: 59 DLG----------SVIEIFRENLE-------KMQSNRDDGVDLRLLVHQSQAGCVIGRAG 101
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
I E+R+ +G + L C DRV+Q+ G+ KV D + ++
Sbjct: 102 YKIKELREQSGLHTLKVYQMLCPC--STDRVIQLVGDVGKVLDCLRSI 147
>gi|313151207|ref|NP_998159.2| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 429
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTA 237
+R + V RIL + GAVIGKGG I+AL+++ A +SV ++ P ER+++V+A
Sbjct: 36 SRNSDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNATVSVPDSSGP---ERILSVSA 92
Query: 238 SEGPESRYSPAQKAVVL-VFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
P ++L + L E KG+DF RL++ + G ++G
Sbjct: 93 D-------IPTVAEILLKIIPTLEEYQHHKGVDFD------CELRLLIHQSLAGSIIGLK 139
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV 338
G I E+R T T+I++ + C DRVV + G+ +V
Sbjct: 140 GAKIKELRDSTQTTIKLFQE---CCPQSTDRVVLVGGKAERV 178
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
S + G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 347 SYSDGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLQ--GSEDRIIT 402
Query: 331 ISGEFSKVKDAVY 343
I+G ++++A Y
Sbjct: 403 ITGTQDQIQNAQY 415
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIITITGTQ 407
>gi|195430448|ref|XP_002063267.1| GK21481 [Drosophila willistoni]
gi|194159352|gb|EDW74253.1| GK21481 [Drosophila willistoni]
Length = 505
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 33/194 (17%)
Query: 171 SDRVATLD-ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD 229
SD A D R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + +
Sbjct: 6 SDGDAAQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGP 63
Query: 230 ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQV 289
ER I ++A ++ + + + +++ E+ DF + RL++ +
Sbjct: 64 ERTIQISADI----------ESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLA 105
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYN 344
GC++GKGG I E+R G + LK S DRVVQ G+ S+V +AV
Sbjct: 106 GCVIGKGGQKIKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVRE 158
Query: 345 VTGRLRDNHFSGTL 358
V RD G +
Sbjct: 159 VITLTRDTPIKGAI 172
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 203 KGGTIIRALQSE-----AGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFS 257
+GG + SE G VG E ERLI V++ E P+ SP +A++L+ S
Sbjct: 517 RGGIFSVCVNSEVQTGACGQVKEVGKNASE--ERLIVVSSQEIPDDPVSPTIEALILLHS 574
Query: 258 RLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD- 316
K + N L RLVV SN+VGC+LG+GG +I+EMR+ TG IR+ S
Sbjct: 575 --------KASTLAENHQL--TTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKA 624
Query: 317 QLLKCISENDRVVQIS 332
K +S ++ +VQ S
Sbjct: 625 DKPKYLSFDEELVQAS 640
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+ A I++ C ER+IT+T GP
Sbjct: 128 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITIT---GPT--- 179
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
V F+ + E + +N + V RLV+ ++Q G L+GKGG+ I
Sbjct: 180 ----DCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIK 235
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 236 EIRETTGAQVQVAGDLL---PNSTEREVTISG 264
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 83/280 (29%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGT 206
+ T P+ + + LE D +A + T + V+ R++ + G++IGKGG+
Sbjct: 173 ITITGPTDCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGS 232
Query: 207 IIRALQSEAGAFISV-GATMP-----------------ECDERLITVTASEGPES----- 243
I+ ++ GA + V G +P +C + + TV P+
Sbjct: 233 KIKEIRETTGAQVQVAGDLLPNSTEREVTISGSQDAIIQCVKLICTVILESPPKGATIPY 292
Query: 244 RYSPAQKAVVLVFSRLIEGT----------SEKGLDFSSN-------------------- 273
R SP V+L +++ E + ++ G+D
Sbjct: 293 RPSPTPGTVLLAGNQVFEASDFGSHPLFSVAQGGVDLQQTYAVQSHYGIPHSELAKLHQL 352
Query: 274 -------------------KGLLVNAR-----LVVASNQVGCLLGKGGTIISEMRKVTGT 309
G+ N++ L++ ++ +G ++G+ GT I+E+R+V+G
Sbjct: 353 SMQQQGLAPISQSATQVLPGGVEANSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGA 412
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
I+I S + S +DR V ISG + A Y +T L
Sbjct: 413 QIKIGS----QIDSTSDRHVTISGTPIAINLAQYLITSCL 448
>gi|32451938|gb|AAH54653.1| Heterogeneous nuclear ribonucleoprotein K [Danio rerio]
gi|182890942|gb|AAI65841.1| Hnrnpk protein [Danio rerio]
Length = 420
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTA 237
+R + V RIL + GAVIGKGG I+AL+++ A +SV ++ P ER+++V+A
Sbjct: 36 SRNSDEMVELRILLQSKNAGAVIGKGGKDIKALRTDYNATVSVPDSSGP---ERILSVSA 92
Query: 238 SEGPESRYSPAQKAVVL-VFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
P ++L + L E KG+DF RL++ + G ++G
Sbjct: 93 D-------IPTVAEILLKIIPTLEEYQHHKGVDFD------CELRLLIHQSLAGSIIGLK 139
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV 338
G I E+R T T+I++ + C DRVV + G+ +V
Sbjct: 140 GAKIKELRDSTQTTIKLFQE---CCPQSTDRVVLVGGKAERV 178
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
S + G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 335 SYSDGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLQ--GSEDRIIT 390
Query: 331 ISGEFSKVKDAVY 343
I+G ++++A+Y
Sbjct: 391 ITGTQDQIQNALY 403
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 342 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIITITGTQ 395
>gi|395536709|ref|XP_003770354.1| PREDICTED: uncharacterized protein LOC100914843 [Sarcophilus
harrisii]
Length = 1087
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 166 PLSLESDRVATLDARTQQ-----------QEVSFRILCSNDKVGAVIGKGGTIIRALQSE 214
PLS A LD + + QEV + + VGA+IGK G I+ L
Sbjct: 881 PLSRNRGHGAVLDPKASEAPPSSGPMVPEQEVVY-LFIPTQAVGAIIGKKGHHIKQLARF 939
Query: 215 AGAFISVGAT-MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSN 273
AGA I + PE ER++ +T PE+++ KA +F +L E F+
Sbjct: 940 AGASIKIAPPEGPEASERMVIITGP--PEAQF----KAQGRIFGKLKEENF-----FNPK 988
Query: 274 KGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRV-VQIS 332
+ + + A + V S+ G ++GKGG ++E+ +T + + DQ END V V+I
Sbjct: 989 EEVKLKAHIRVPSSAAGRVIGKGGKTVNELHNLTSAEVIVPRDQ---TPDENDEVIVKII 1045
Query: 333 GEF 335
G F
Sbjct: 1046 GHF 1048
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ +Q + RIL VGA+IGK G I+ L + + + + GA+ E+
Sbjct: 526 AQAKQLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAS-----EKP 580
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
+T+ AS PE S A + ++ + + E K ++ + +++ ++ VG L
Sbjct: 581 VTIHAS--PEG-ASEACRMILEIMQK--EADETKAVEE-------IPLKILAHNSLVGRL 628
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD 351
+GK G + ++ + TGT I I Q L I +R + + G A + +LR+
Sbjct: 629 IGKEGRNLKKIEQDTGTKITISPLQDL-TIYNPERTITVKGPIEACSSAEVEIMRKLRE 686
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 203 KGGTIIRALQSE-----AGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFS 257
+GG + SE G VG E ERLI V++ E P+ SP +A++L+ S
Sbjct: 194 RGGIFSVCVNSEVQTGACGQVKEVGKNASE--ERLIVVSSQEIPDDPVSPTIEALILLHS 251
Query: 258 RLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD- 316
++ + N L RLVV SN+VGC+LG+GG +I+EMR+ TG IR+ S
Sbjct: 252 KVST--------LAENHQL--TTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKA 301
Query: 317 QLLKCISENDRVVQIS 332
K +S ++ +VQ S
Sbjct: 302 DKPKYLSFDEELVQAS 317
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 229 DERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQ 288
+ERLI V++ E P+ SP +A++L+ S K + N L RLVV SN+
Sbjct: 564 EERLIVVSSQEIPDDPVSPTIEALILLHS--------KASTLAENHQL--TTRLVVPSNK 613
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIIS 315
VGC+LG+GG +I+EMR+ TG IR+ S
Sbjct: 614 VGCILGEGGKVITEMRRRTGAEIRVYS 640
>gi|320588068|gb|EFX00543.1| kh domain protein RNA-binding protein [Grosmannia clavigera kw1407]
Length = 375
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 167 LSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP 226
L + + + D Q +++ R + S+ + G +IGKGG + L+ E G V +
Sbjct: 28 LGPDGEIIPKTDEEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQ 87
Query: 227 ECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVAS 286
+R++T+T KA +V L+EG G+ +L+++
Sbjct: 88 GVHDRVLTITGG------CDAISKAYAVVARALLEGVPTMGMGGILQGNGTHPIKLLISH 141
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
NQ+G ++G+GG I ++ V+G +R+++ + + S +R+V++ G ++ AV+ +
Sbjct: 142 NQMGTVIGRGGLKIKHIQDVSG--VRMVAQKDILPQS-TERIVEVQGTPEGIQKAVWEIC 198
Query: 347 GRLRDNHFSGTLN-----TARTRSTSSVLTETS 374
L D+ GT RT+ TS L S
Sbjct: 199 KCLVDDWQRGTGTVLYNPVVRTQGTSPTLGSGS 231
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ +R++ +T P
Sbjct: 279 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGP--P 335
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F++ + + + + V S+ G ++GKGG ++
Sbjct: 336 EAQF----KAQGRIFGKLKEENF-----FTAKEEVKLETHIKVPSSAAGRVIGKGGKTVN 386
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF-------SKVKDAVYNVTGRLRDNH 353
E++ +T + + DQ END V V+ISG F K+++ + V + H
Sbjct: 387 ELQNLTSAEVIVPRDQ---TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK-QQEQKH 442
Query: 354 FSGTLNTARTR 364
G T R++
Sbjct: 443 QQGAPTTPRSK 453
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ +R++ +T P
Sbjct: 433 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGP--P 489
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F++ + + + + V S+ G ++GKGG ++
Sbjct: 490 EAQF----KAQGRIFGKLKEENF-----FTAKEEVKLETHIKVPSSAAGRVIGKGGKTVN 540
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF-------SKVKDAVYNVTGRLRDNH 353
E++ +T + + DQ END V V+ISG F K+++ + V + H
Sbjct: 541 ELQNLTSAEVIVPRDQ---TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK-QQEQKH 596
Query: 354 FSGTLNTARTR 364
G T R++
Sbjct: 597 QQGAPTTPRSK 607
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT GP
Sbjct: 40 QSMLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVT---GP- 95
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
+ +A LV L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 96 --LNGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHP-VRLLISHNQMGTIIGRQGLKIK 152
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 153 HIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGT 205
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
+VG++IGK G I+ + E+GA I++ C ER++TVT S +A++
Sbjct: 3 EVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGS----------TEAILKA 50
Query: 256 FSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
FS + E SN L V RL+V ++Q G L+GKGG+ I E+R+ SI
Sbjct: 51 FSLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIREAR-ASI 109
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
++ S+ L + +R V +SG + +Y +
Sbjct: 110 QVASEMLP---NSTERAVTVSGTADAITKCIYQI 140
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 14/84 (16%)
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
+ ++ +GC++GKGG+ I+E+R+++G +I+I + + DR V ISG + A Y
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE----GSKDRTVTISGTPEAINLAQY 281
Query: 344 ----------NVTGRLRDNHFSGT 357
N+T L NH + T
Sbjct: 282 LINTSMELHKNLTLDLTSNHPAST 305
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRY 245
R L SN G+VIGKGG I QS++GA I + P +R+I V+
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGG------I 91
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KAV L+ ++L+ + D + + + RLVV ++ G ++GKGG+II +
Sbjct: 92 DDVLKAVELIIAKLLSEIPAEDGDEAEPR---MRVRLVVPNSACGSIIGKGGSIIKSFIE 148
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN-HFSGTLN 359
+ I+ IS K DR+V ++G + A+ + +L D+ H+S T++
Sbjct: 149 ESHAGIK-ISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQTMH 202
>gi|325296771|ref|NP_001191623.1| pedal peptide 2 precursor [Aplysia californica]
gi|94434888|gb|ABF18973.1| pedal peptide 2 [Aplysia californica]
Length = 628
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 211 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 270
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 271 IKRPVDSIGSSFIKRGVDSIGSSFIKRPID 300
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 235 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRGVDSIGSSF 294
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RP++ + + R ++S ++RP++
Sbjct: 295 IKRPIDTIGSSFIKRGVDSIGSSFIKRPVD 324
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 67 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 126
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 127 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 156
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 79 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 138
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 139 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 168
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 91 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 150
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 151 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 180
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 103 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 162
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 163 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 192
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 115 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 174
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 175 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 204
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 127 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 186
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 187 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 216
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 139 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 198
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 199 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 228
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 151 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 210
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 211 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 240
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 163 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 222
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 223 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 252
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 175 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 234
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 235 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 264
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 187 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 246
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++RP++
Sbjct: 247 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVD 276
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+R VD+I I RP+DTI I+R ++++
Sbjct: 259 IKRPVDSIGSSFIKRPVDSIGSSFIKRGVDSIGSSFIKRPIDTIGSSFIKRGVDSIGSSF 318
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + + G E ++RP++
Sbjct: 319 IKRPVDSIGSSFIKKRRFGGENEFMKRPID 348
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I +P++ I RPV++I I+RPVD+I I RP+D+I I+R ++++
Sbjct: 199 IKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSF 258
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLE 104
I RPV+++ + R ++S ++R ++
Sbjct: 259 IKRPVDSIGSSFIKRPVDSIGSSFIKRGVD 288
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 3 GSRFNEANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHET 62
GS F + N+ + AF I RP++TI I++ +D+I I RP+D+I
Sbjct: 375 GSSFIKKNMDQA-------AF---IKRPIDTIGSSFIKKNIDSIGSSFIKRPVDSIGSSF 424
Query: 63 IRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLE 104
I+++++++ I RP++ + + +S G E+++RP++
Sbjct: 425 IKKNIDSIGSSFIKRPIDTIGSSFIKKSY--GQNEMMKRPVD 464
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 5 RFNEANLQETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHE----------TIHRP 54
RF N E + +P++ I + V++I I+RP+DTI I RP
Sbjct: 335 RFGGEN--EFMKRPIDTIGSSFIKKNVDSIGSSFIKRPIDTIGSSFIKKNMDQAAFIKRP 392
Query: 55 LDTISHETIRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLE 104
+DTI I+++++++ I RPV+++ + ++++S ++RP++
Sbjct: 393 IDTIGSSFIKKNIDSIGSSFIKRPVDSIGSSFIKKNIDSIGSSFIKRPID 442
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 29 RPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDTIARPVEAVPQEILW 88
R V +I I+RPVD+I I RP+D+I I+R ++++ I RPV+++ +
Sbjct: 57 RHVGSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIK 116
Query: 89 RSLESGPQEILRRPLE 104
R ++S ++RP++
Sbjct: 117 RPVDSIGSSFIKRPVD 132
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%)
Query: 27 ICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDTIARPVEAVPQEI 86
I RP++TI I+R VD+I I RP+D+I I++ ++ + RP++ +
Sbjct: 295 IKRPIDTIGSSFIKRGVDSIGSSFIKRPVDSIGSSFIKKRRFGGENEFMKRPIDTIGSSF 354
Query: 87 LWRSLESGPQEILRRPLE 104
+ ++++S ++RP++
Sbjct: 355 IKKNVDSIGSSFIKRPID 372
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIP------------HETIHRPLDTISHET 62
I +P++ I R V++I I+RPVD+I +E + RP+DTI
Sbjct: 295 IKRPIDTIGSSFIKRGVDSIGSSFIKRPVDSIGSSFIKKRRFGGENEFMKRPIDTIGSSF 354
Query: 63 IRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEILRRPLE 104
I+++++++ I RP++ + + ++++ ++RP++
Sbjct: 355 IKKNVDSIGSSFIKRPIDTIGSSFIKKNMDQ--AAFIKRPID 394
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 15 IHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDT 74
I K ++ I RPV++I I++ +D+I I RP+DTI I++S ++
Sbjct: 401 IKKNIDSIGSSFIKRPVDSIGSSFIKKNIDSIGSSFIKRPIDTIGSSFIKKSYGQ--NEM 458
Query: 75 IARPVEAVPQEILWRSLESGPQEILRRPLEVFA 107
+ RPV+++ + R +++ ++R V+
Sbjct: 459 MKRPVDSIGSSFIKRPIDTIGSSFIKRGAFVYG 491
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 40 RRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDTIARPVEAVPQEILWRSLESGPQEIL 99
+R V +I I RP+D+I I+R ++++ I RPV+++ + R ++S +
Sbjct: 56 KRHVGSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFIKRPVDSIGSSFI 115
Query: 100 RRPLE 104
+RP++
Sbjct: 116 KRPVD 120
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ +R++ +T P
Sbjct: 433 EQEVVY-LFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGP--P 489
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F++ + + + + V S+ G ++GKGG ++
Sbjct: 490 EAQF----KAQGRIFGKLKEENF-----FTAKEEVKLETHIKVPSSAAGRVIGKGGKTVN 540
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF-------SKVKDAVYNVTGRLRDNH 353
E++ +T + + DQ END V V+ISG F K+++ + V + H
Sbjct: 541 ELQNLTSAEVIVPRDQ---TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK-QQEQKH 596
Query: 354 FSGTLNTARTR 364
G T R++
Sbjct: 597 QQGAPTTPRSK 607
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ ER++T+T
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISDG--SSPERIVTITG-------- 66
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
A + + F+ + E E L N + V RLV ++Q G L+GKGG+ I
Sbjct: 67 --ASEVIFKAFAMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIK 124
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
E+R+ TG +++ D L +R V ISG + V ++ + ++ G
Sbjct: 125 EIRESTGAQVQVAGDLLP---DSTERAVTISGTPHAITQCVKHICTVMLESPPKGATIPY 181
Query: 362 RTRSTS----SVLTETSPYSRLKDPASFGV 387
R + ++ +VLT+ + P F +
Sbjct: 182 RPKPSAGGGHTVLTQPHAATAFAIPGQFAI 211
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+ A +++ C ER+IT+T S R
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGSTDCVFR- 72
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A ++ +L E + + + + V RLV+ ++Q G L+GKGG I E+R+
Sbjct: 73 -----AFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE 127
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG-TLNTARTR 364
TG I++ D L + +R V ISG V V + + ++ G T+ +
Sbjct: 128 STGAQIQVAGDLL---PNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPSP 184
Query: 365 STSSVLTETSPYSRLKDPASFGVHSSVAVSH 395
S ++VL ++L D + F H +V+
Sbjct: 185 SPAAVLIAG---NQLFDASEFATHPMYSVAQ 212
>gi|8699624|gb|AAF78762.1|AF275629_1 bancal protein [Drosophila melanogaster]
Length = 508
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRSEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 169
Query: 355 SGTLNT 360
G ++
Sbjct: 170 KGAIHN 175
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+ A +++ + C ER+IT+T S +S +
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNI--SEGSCPERIITITGST--DSVF 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+A ++ +L E + + + + V RLV+ ++Q G L+GKGG I E+R+
Sbjct: 72 ----RAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRE 127
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG I++ D L + +R V ISG V V
Sbjct: 128 STGAQIQVAGDLL---PNSTERGVTISGNQDSVIQCV 161
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 80/257 (31%)
Query: 169 LESDRVATLDART--QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATM 225
LE D A + T + V+ R++ + G++IGKGG I+ ++ GA I V G +
Sbjct: 81 LEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLL 140
Query: 226 PECDERLITVTAS----------------EGPES------RYSPAQKAVVLVFSRLIEGT 263
P ER +T++ + E P R SP+ A+++ +++ E +
Sbjct: 141 PNSTERGVTISGNQDSVIQCVKLICTVILESPPKGATIPYRPSPSPAALLIAGNQVFEAS 200
Query: 264 ----------SEKGLDF-----------------------SSNKGLLVNAR--------- 281
++ GLD S +GL A+
Sbjct: 201 EFAPHPLYSVAQGGLDLQQAYTLQNQYGIPHSELAKLHQLSVQQGLSPIAQPASAVIPGM 260
Query: 282 ---------LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQIS 332
L++ ++ +G ++G+ GT I+E+R+V+G I+I S + +DR V I+
Sbjct: 261 DSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGS----QLDGTSDRHVTIT 316
Query: 333 GEFSKVKDAVYNVTGRL 349
G + A Y +T L
Sbjct: 317 GTPVSINLAQYLITSCL 333
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ + C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI--SEGSCPERITTITGS------T 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
TG +++ D L + +R V +SG + V + + ++H
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSGVPDAIILCVRQICAVILEHH 174
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 166 PLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM 225
PL E D E++ R + S+ + G +IGK G + L+ E G V +
Sbjct: 33 PLKTEEDYAVA--------ELTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVV 84
Query: 226 PECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVV 284
P +R++TVT + +A +V L+EG + G+ SN G RL++
Sbjct: 85 PGVHDRVLTVTG------QLRSLARAYAIVAKGLLEGAPQMGMGGIVSNNGTHP-IRLLI 137
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYN 344
+ NQ+G ++G+ G I ++ +G +R+++ + + S +R+V++ G ++ A++
Sbjct: 138 SHNQMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWE 194
Query: 345 VTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSV 391
+ L D+ GT + + L+ + P + PA G ++
Sbjct: 195 IGKCLLDDWQRGTGTVLYNPAVRASLSGSQPLNS-NPPAGNGYQNNA 240
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 50/74 (67%)
Query: 278 VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
+N RL+V + +GCL+G+GG+I+++MRK T +I I + S +D +V++SGE K
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADK 60
Query: 338 VKDAVYNVTGRLRD 351
++DA+ + RLR+
Sbjct: 61 LRDALVQIILRLRE 74
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q S +I N +VG +IGKGG I+ LQ ++GA I V M P RL+ + +
Sbjct: 134 QGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTP- 192
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV--VASNQVGCLLGKGGT 298
+ + A++ + V S G S G+ G + + V V +N+VG ++GKGG
Sbjct: 193 --DQIAKAEQLINDVLSEAEAGGS--GIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGE 248
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
I M+ TG I++I L + +R VQI G +++ A
Sbjct: 249 TIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESA 291
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 16/172 (9%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESR 244
++L SN G+VIGKGG I QS++GA I + P +R+I ++
Sbjct: 37 IKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGG------ 90
Query: 245 YSPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
A KA+ L+ ++L+ E +E G D + RLVV +N G ++GKGG+II
Sbjct: 91 IDDALKALELIIAKLLSEIPTEDGDDAEPR----MRVRLVVPNNACGSIIGKGGSIIKSF 146
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN-HF 354
+ + I+ IS + DR+V I+G + A+ + +L D+ H+
Sbjct: 147 IEESHAGIK-ISPLDTDFLGLTDRLVAITGTLEEQMHAIDLILSKLTDDTHY 197
>gi|198458337|ref|XP_002138531.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
gi|198136305|gb|EDY69089.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
Length = 505
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEDTVRILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDDS--QGPERTIQISADI 74
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
+A + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 75 ----------EATLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ ++V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQAQVIEAVREVITLTRDTPI 169
Query: 355 SGTLNT 360
G ++
Sbjct: 170 KGAIHN 175
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 12/148 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVK-MREESGARINI--SEGNCPERIITLA---GPTNAI 67
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 68 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 124
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 125 STGAQVQVAGDMLP---NSTERAITIAG 149
>gi|6006748|gb|AAF00596.1|AF142631_1 hnRNP K protein homolog [Drosophila melanogaster]
Length = 490
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 169
Query: 355 SGTL 358
G +
Sbjct: 170 KGAI 173
>gi|195585141|ref|XP_002082349.1| GD11524 [Drosophila simulans]
gi|194194358|gb|EDX07934.1| GD11524 [Drosophila simulans]
Length = 496
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 169
Query: 355 SGTL 358
G +
Sbjct: 170 KGAI 173
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 33/208 (15%)
Query: 134 ILPDLHVDILSQRNSVLTTAPSSSISYVSAV----RPLSLESDRVATLDARTQQQEVSFR 189
++P L+++ L ++ L+ PS + AV P ++ V L TQ
Sbjct: 361 LIPGLNLNALGIFSTGLSMLPSGTGVRRPAVSTPYNPFAVPEQEVVNLFIPTQ------- 413
Query: 190 ILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPA 248
VGA+IGK G I+ L AGA I + A PE ER++ +T PE+++
Sbjct: 414 ------AVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVIITGP--PEAQF--- 462
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
KA +F +L E F+ + + + A + V S+ G ++GKGG ++E++ +T
Sbjct: 463 -KAQGRIFGKLKEENF-----FNPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTS 516
Query: 309 TSIRIISDQLLKCISENDR-VVQISGEF 335
+ + DQ EN+ VV+I G F
Sbjct: 517 AEVIVPRDQ---TPDENEEVVVKIIGHF 541
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ L + + + + GA E+
Sbjct: 186 SQPKQLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAA-----EKP 240
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
IT+ A+ PE S A + ++ + + E T S+ + + +++ ++ VG L
Sbjct: 241 ITIHAT--PEG-CSEACRMILDIMQKEAEETK------SAEE---IPLKILAHNSLVGRL 288
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + TGT I I Q L I +R + + G +A + +LR+
Sbjct: 289 IGKEGRNLKKIEQDTGTKITISPLQDL-TIYNPERTITVKGSIEACSNAEAEIMNKLREA 347
Query: 353 H 353
+
Sbjct: 348 Y 348
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
+++ R + S+ + G +IGK G + L+ E G V +P +R++TVT +
Sbjct: 46 DLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG------Q 99
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+A +V L+EG + G+ SN G RL+++ NQ+G ++G+ G I +
Sbjct: 100 LRSLARAYAIVAKGLLEGAPQMGMGGIVSNNGTHP-VRLLISHNQMGTIIGRQGLKIKHI 158
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTART 363
+ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 159 QDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLLDDWQRGTGTVLYN 215
Query: 364 RSTSSVLTETSPYSRLKDPASFGVHSSVA 392
+ + L+ + P + PA G ++ +
Sbjct: 216 PAVRASLSGSQPLNN-NPPAGNGYQNNTS 243
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-----ATMPECDERLITVTAS 238
QE +F + N+ VGA+IG G+ IR + +GA + + + ER +T+ S
Sbjct: 376 QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 434
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G S + + + ++V S QVG ++GKGG
Sbjct: 435 --PESQW----KAQYLIFEKM----REEGY-VSGTEDVRLTIEILVPSAQVGRIIGKGGQ 483
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q ++ + V I G F V+ A
Sbjct: 484 NVRELQRVTGSVIKLSEQQATPPSADEETTVHIIGPFFSVQSA 526
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDE 230
L +Q + RIL +D VGA+IG+ G+ IR + + A + +VG+ E
Sbjct: 134 LPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSL-----E 188
Query: 231 RLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSN-------KGLLVNARLV 283
+ IT+ G + A K ++ V + T+ KG D SN + +++
Sbjct: 189 KAITIY---GNPDNCTNACKKILEVMQQEANNTN-KGYDEGSNSDDHGAVNSYEITLKIL 244
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
+N +G ++GKGG I + + T T I + S + + +R++ + G + A
Sbjct: 245 AHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGTIENMSKAES 303
Query: 344 NVTGRLRDNH 353
++ +LR ++
Sbjct: 304 MISSKLRQSY 313
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-----ATMPECDERLITVTAS 238
QE +F + N+ VGA+IG G+ IR + +GA + + + ER +T+ S
Sbjct: 338 QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 396
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G + + + + ++V S QVG ++GKGG
Sbjct: 397 --PESQW----KAQYLIFEKM----REEGY-VAGTEDVRLTIEILVPSTQVGRIIGKGGQ 445
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q +E + V I G F V+ A
Sbjct: 446 NVRELQRVTGSVIKLSEQQATPPSAEEETTVHIIGPFFSVQSA 488
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 25/185 (13%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPEC 228
A L +Q + RIL +D VGA+IG+ G+ IR + A + +VG+
Sbjct: 110 AGLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSL---- 165
Query: 229 DERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQ 288
E+ IT+ + PE+ + A K ++ V + T NKG + +++ +N
Sbjct: 166 -EKAITIYGN--PEN-CTNACKKILEVMQQEANNT---------NKG-EITLKILAHNNL 211
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
+G ++GKGG I + + T T I + S + + +R++ + G + A ++ +
Sbjct: 212 IGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGSIDNMSKAESMISSK 270
Query: 349 LRDNH 353
LR ++
Sbjct: 271 LRQSY 275
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTA 237
+R + V RIL + GAVIGKGG I+AL+S+ A +SV ++ P ER+++++A
Sbjct: 36 SRNSDEMVELRILLQSKNAGAVIGKGGKNIKALRSDYNASVSVPDSSGP---ERILSISA 92
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ ++ + L E G+DF RL++ + G ++G G
Sbjct: 93 D------IETVGEILLKIIPTLEEYQQYNGMDFD------CELRLLIHQSLAGSIIGVKG 140
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
I E+R+ T TSI++ + C DRVV + G+ +V + V
Sbjct: 141 AKIKELRENTKTSIKLFQEC---CPQSTDRVVLVGGKSERVVECV 182
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+S G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 350 YSDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 405
Query: 330 QISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
I+G ++++A Y + ++ +SG L
Sbjct: 406 TITGTQDQIQNAQYLLQNSVK--QYSGHL 432
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 411
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-----ATMPECDERLITVTAS 238
QE +F + N+ VGA+IG G+ IR + +GA + + + ER +T+ S
Sbjct: 329 QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 387
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G + + + + ++V S QVG ++GKGG
Sbjct: 388 --PESQW----KAQYLIFEKM----REEGY-VAGTEDVRLTIEILVPSTQVGRIIGKGGQ 436
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q +E + V I G F V+ A
Sbjct: 437 NVRELQRVTGSVIKLSEQQATPPSAEEETTVHIIGPFFSVQSA 479
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 25/183 (13%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDE 230
L +Q + RIL +D VGA+IG+ GT IR + A + +VG+ E
Sbjct: 103 LPGSGRQTDFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSL-----E 157
Query: 231 RLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
+ IT+ + PE+ + A K ++ V + T NKG + +++ +N +G
Sbjct: 158 KAITIYGN--PEN-CTNACKKILEVMQQEANNT---------NKG-EITLKILAHNNLIG 204
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++GKGG I + + T T I + S + + +R++ + G + A ++ +LR
Sbjct: 205 RIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGSIDNMSKAESMISSKLR 263
Query: 351 DNH 353
++
Sbjct: 264 QSY 266
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ + C ER+IT+ GP +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI--SEGNCPERIITLA---GPTNAI 80
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 81 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 137
Query: 306 VTGTSIRIISD 316
TG +++ D
Sbjct: 138 STGAQVQVAGD 148
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E S + ++ V RLVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIR 312
VT +++
Sbjct: 126 VTEAALK 132
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 267 GLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I+I + D
Sbjct: 255 GLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN----PVEGSTD 307
Query: 327 RVVQISGEFSKVKDAVYNVTGRL 349
R V I+G + + A Y + RL
Sbjct: 308 RQVTITGSAASISLAQYLINVRL 330
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 35/259 (13%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 38 DEEYAQAQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 97
Query: 238 S-EGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGK 295
EG KA +V L+EG G+ SN G +L+++ NQ+G ++G+
Sbjct: 98 GCEG-------ISKAYAVVARALLEGAPSMGMGGVVSNNGTHP-IKLLISHNQMGTIIGR 149
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS 355
G I ++ V+G +R+++ + + S +RVV++ G ++ AV+ + L D+
Sbjct: 150 QGLKIKHIQDVSG--VRMVAQKEMLPQS-TERVVEVQGTPEGIQRAVWEICKCLIDDW-- 204
Query: 356 GTLNTARTRSTSSVLTETSPYSRLKDPA------SFGVHSSVAVSHDFSQPPLTQDGNWS 409
R T +VL +P R + PA S G + D+S +T+ GN +
Sbjct: 205 -------QRGTGTVL--YNPVVRTQ-PAGATQMGSSGAGYGTSNRGDYSSSRVTRTGNGA 254
Query: 410 S-SEGQLRCWKRLESRSES 427
S G R + R RS+S
Sbjct: 255 DFSNGGGRSYNR---RSDS 270
>gi|45552763|ref|NP_995906.1| bancal, isoform C [Drosophila melanogaster]
gi|45445681|gb|AAM68389.2| bancal, isoform C [Drosophila melanogaster]
gi|261338783|gb|ACX70073.1| RE05515p [Drosophila melanogaster]
Length = 502
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 23 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 79
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 80 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 122
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 123 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 175
Query: 355 SGTL 358
G +
Sbjct: 176 KGAI 179
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q S +I N +VG +IGKGG I+ LQ ++GA I V M P RL+ + +
Sbjct: 134 QGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGT-- 191
Query: 241 PESRYSPAQ--KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR-----LVVASNQVGCLL 293
P Q KA L+ L E +E G ++ L A + V +N+VG ++
Sbjct: 192 ------PDQIAKAEQLINDVLSE--AEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLII 243
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
GKGG I M+ TG I++I L + +R VQI G +++ A
Sbjct: 244 GKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESA 291
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 25/175 (14%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD---- 229
V T DA QE +F + N+ VGA+IG G+ IR + +GA + + E D
Sbjct: 399 VLTSDA----QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPL--ESDKPAE 451
Query: 230 ---ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVAS 286
ER +T+ S PES++ KA L+F ++ E+G S + + + ++V S
Sbjct: 452 QQTERKVTIVGS--PESQW----KAQYLIFEKM----REEGF-VSGTEDVRLTVEILVPS 500
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
QVG ++GKGG + E+++VTG+ I++ Q ++ + V I G F V+ A
Sbjct: 501 AQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPTADEETTVHIIGPFFSVQSA 555
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 25/183 (13%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDE 230
L +Q + RIL +D VGA+IG+ G+ IR + A + V G+ E
Sbjct: 179 LPGAGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSL-----E 233
Query: 231 RLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
+ IT+ + PE+ + +K + ++ ++NKG + +++ +N +G
Sbjct: 234 KAITIYGN--PENCTNACKKILEVMHQEA----------SNTNKG-EITLKILAHNNLIG 280
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++GKGG I + + T T I + S + + +R++ + G + A ++ +LR
Sbjct: 281 RIIGKGGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGSIENMSKAEAMISNKLR 339
Query: 351 DNH 353
++
Sbjct: 340 QSY 342
>gi|387915114|gb|AFK11166.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 436
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 19/199 (9%)
Query: 165 RPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GA 223
RP + A +R Q V R+L + GAVIGKGG I++L+++ A +SV +
Sbjct: 27 RPAEDHDEEQAFKRSRNNDQCVELRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDS 86
Query: 224 TMPECDERLITVTAS----EGPESRYSPAQKAVVLV-FSRLIEGTSE-KGLDFSSNKGLL 277
+ P ER++++ A S+ P + V V F L E KG DF
Sbjct: 87 SGP---ERILSINADIETIGDILSKIIPTLEEVRCVHFHHLQESYQHYKGKDFD------ 137
Query: 278 VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
R++V +Q G ++G G I E+R+ T T+I++ + C DRVV + G+ +
Sbjct: 138 CELRMLVHQSQAGSIIGVKGVKIKELRESTQTTIKLFQEC---CPHSTDRVVLLGGKPDR 194
Query: 338 VKDAVYNVTGRLRDNHFSG 356
V + + + G L ++ G
Sbjct: 195 VVECIKIIMGLLSESPVKG 213
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 362 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 415
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q + R L +IGKGG I ++ ++GA ++ +P ER+++V GP
Sbjct: 104 QTIQMRALIVTQDASIIIGKGGRHINEVREKSGARATISEAVPGNAERILSVA---GPLD 160
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISE 302
S KA L+ R+ +++ D S G V R +V ++++G ++GK G+ I E
Sbjct: 161 AVS---KAFGLIVRRI----NDEPFDVPSVPGSRAVTIRFIVPNSRMGSVIGKAGSKIKE 213
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTA 361
++ ++G ++ S+ LL +E RV+ ISG V AVY V L DN NT+
Sbjct: 214 IQDMSGARVQ-ASEALLPGSTE--RVLSISGVADAVHIAVYYVGMILVDNQERMPANTS 269
>gi|410925642|ref|XP_003976289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Takifugu rubripes]
Length = 430
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +S
Sbjct: 19 ANGKRPAEDMDEEHAFKRSRNADEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVS 78
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V ++ P ER+++V AS K ++ + L E G+DF S LL++
Sbjct: 79 VPDSSGP---ERILSVNAS------IDTIGKILLKIIPTLEEYQHYSGIDFDSELRLLIH 129
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L G ++G G I E+R+ T T+I++ + C DRVV + G+ +V
Sbjct: 130 QSL------AGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVLVGGKPERVI 180
Query: 340 DAV 342
+ +
Sbjct: 181 ECI 183
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+S G ++ ++ + + G ++GKGG I ++R G SI+I D+ L+ DR++
Sbjct: 347 YSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI--DEPLE--GSEDRII 402
Query: 330 QISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
I+G ++++A Y + +R +SG
Sbjct: 403 TITGTQDQIQNAQYLLQNSVR--QYSGRF 429
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E GA I + + ++R+IT+T ++
Sbjct: 355 ITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQ 408
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 28/179 (15%)
Query: 173 RVATLDARTQQQE-----VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE 227
R+++ DA +++ ++ R+L +VG++IGK G ++ ++ ++ A I++
Sbjct: 37 RMSSSDAGLEEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEG--S 94
Query: 228 CDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLV 283
C ER+ T+T S AV S + E +N G + V RLV
Sbjct: 95 CPERITTITGST----------AAVFHAVSMIAFKLDEDLCSAPANGGTVSRPPVTLRLV 144
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
+ ++Q G L+GK GT I E+R+ TG +++ D L + +R V +SG V DA+
Sbjct: 145 IPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 196
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-----ATMPECDERLITVTAS 238
QE +F + N+ VGA+IG G+ IR + +GA + + + ER +T+ S
Sbjct: 364 QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIGS 422
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G + + + + ++V S QVG ++GKGG
Sbjct: 423 --PESQW----KAQYLIFEKM----REEGY-VAGTEDVRLTIEILVPSTQVGRIIGKGGQ 471
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q +E + V I G F V+ A
Sbjct: 472 NVRELQRVTGSVIKLSEQQATPPSAEEETTVHIIGPFFSVQSA 514
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDE 230
L +Q + RIL +D VGA+IG+ G+ IR + + A + +VG+ E
Sbjct: 138 LPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSL-----E 192
Query: 231 RLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
+ IT+ + PE+ + +K + ++ S+NKG + +++ +N +G
Sbjct: 193 KAITIYGN--PENCTNACKKILDVMQQEAA----------STNKG-EITLKILAHNNLIG 239
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++GKGG I + + T + I + S + + +R++ + G + A ++ +LR
Sbjct: 240 RIIGKGGNTIKRIMQDTDSKITVSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLR 298
Query: 351 DNH 353
++
Sbjct: 299 QSY 301
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R++ +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S G
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTGA---- 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 72 --VFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 199 AVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSR 258
A +G+ GT ++ ++ E+GA I++ + C ER+IT+T GP + KA ++ +
Sbjct: 109 ASLGRKGTSVKRIREESGARINI--SEGNCPERIITLT---GPTNAIF---KAFAMIIDK 160
Query: 259 LIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQL 318
L E + + ++ V RLVV + Q G L+GKGG I E+R+ TG +++ D L
Sbjct: 161 LEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDML 220
Query: 319 LKCISENDRVVQISGEFSKVKDAVYNV 345
+ +R + I+G V + V +
Sbjct: 221 P---NSTERAITIAGVPQSVTECVKQI 244
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 256 FSRLIEGTSEKGLDFSSN--KGLLVNA--------RLVVASNQVGCLLGKGGTIISEMRK 305
F+ L GT G+D SS KG + L + +N +GC++G+ G I+E+R+
Sbjct: 330 FAMLHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 389
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++G I+I + + R V I+G + + A Y + RL
Sbjct: 390 MSGAQIKIAN----PVEGSSGRQVTITGSAASISLAQYLINARL 429
>gi|281363839|ref|NP_001163216.1| bancal, isoform E [Drosophila melanogaster]
gi|272432584|gb|ACZ94488.1| bancal, isoform E [Drosophila melanogaster]
Length = 493
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 169
Query: 355 SGTL 358
G +
Sbjct: 170 KGAI 173
>gi|410925644|ref|XP_003976290.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Takifugu rubripes]
Length = 430
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +S
Sbjct: 19 ANGKRPAEDMDEEHAFKRSRNADEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVS 78
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V ++ P ER+++V AS K ++ + L E G+DF S LL++
Sbjct: 79 VPDSSGP---ERILSVNAS------IDTIGKILLKIIPTLEEYQHYSGIDFDSELRLLIH 129
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L G ++G G I E+R+ T T+I++ + C DRVV + G+ +V
Sbjct: 130 QSL------AGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVLVGGKPERVI 180
Query: 340 DAV 342
+ +
Sbjct: 181 ECI 183
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+S G ++ ++ + + G ++GKGG I ++R G SI+I D+ L+ DR++
Sbjct: 347 YSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI--DEPLE--GSEDRII 402
Query: 330 QISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
I+G ++++A Y + +R +SG
Sbjct: 403 TITGTQDQIQNAQYLLQNSVR--QYSGRF 429
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E GA I + + ++R+IT+T ++
Sbjct: 355 ITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGSEDRIITITGTQ 408
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER+IT+ GP +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA---GPTNAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ +L E + ++ V LVV ++Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R + I+G
Sbjct: 126 STGAQVQVAGDMLP---NSTERAITIAG 150
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 96/239 (40%), Gaps = 63/239 (26%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTA------- 237
V+ ++ + G++IGKGG I+ ++ GA + V G +P ER IT+
Sbjct: 98 VTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 238 -------------SEGPESRYSPAQKAVVLVFS----RLIEGTS---------------- 264
+G Y P + ++F+ I+G
Sbjct: 158 CVKQIFVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQ 217
Query: 265 -------------EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
GLD S+ + L + ++ +GC++G+ G I+E+R+++G I
Sbjct: 218 QSHFPMTHGNTGFSAGLDASAQT---TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 274
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVL 370
+I + DR V I+G + + A Y + RL + +G + ++ + SS++
Sbjct: 275 KIAN----PVEGSTDRQVTITGSAASISLAQYLINVRL--SLVTGGMGSSYNNADSSII 327
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPES 243
V R L + GA+IGKGG+ I +L+ E A ISV P+C ER++++ A
Sbjct: 38 VDVRFLLQSRNAGAIIGKGGSNINSLRKEFKASISV----PDCPGPERILSIVAD----- 88
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSS----NKGLLVNARLVVASNQVGCLLGKGGTI 299
+ + +I ++ + F+ N G RL++ + GC++G+ G
Sbjct: 89 -----LDTLGEILLNIIPKLDDRSMQFAQHTGQNGGSESEMRLLMHQSHAGCIIGRAGCR 143
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
I E+R+ TG +I++ C +R+V+++G S V D + +
Sbjct: 144 IKELRESTGANIKVHGSC---CPGSTERIVKVTGSPSVVVDCIKQI 186
>gi|355709455|gb|AES03597.1| poly binding protein 4 [Mustela putorius furo]
Length = 206
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 163 AVRPLSLESDRVATLDARTQQQE-----VSFRILCSNDKVGAVIGKGGTIIRALQSEAGA 217
AV P L DR++ DA +++ ++ R+L +VG++IGK G ++ ++ ++ A
Sbjct: 1 AVAPAPL--DRMSGSDAGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSA 58
Query: 218 FISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL 277
I++ C ER+ T+T S + AV ++ +L E + +
Sbjct: 59 RITISEG--SCPERITTITGS------TAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPP 110
Query: 278 VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
V RLV+ ++Q G L+GK GT I E+R+ TG +++ D L + +R V +SG
Sbjct: 111 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLP---NSTERAVTVSG---- 163
Query: 338 VKDAV 342
V DA+
Sbjct: 164 VPDAI 168
>gi|302508471|ref|XP_003016196.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
gi|291179765|gb|EFE35551.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
Length = 531
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 209 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GPL 265
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA +V L+EG + G+ + RL+++ NQ+G ++G+ G I
Sbjct: 266 QGTS---KAYSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKY 322
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 323 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGT 374
>gi|194753778|ref|XP_001959187.1| GF12183 [Drosophila ananassae]
gi|190620485|gb|EDV36009.1| GF12183 [Drosophila ananassae]
Length = 511
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 32/186 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRTEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 169
Query: 355 SGTLNT 360
G ++
Sbjct: 170 RGAIHN 175
>gi|45552765|ref|NP_995907.1| bancal, isoform A [Drosophila melanogaster]
gi|442624312|ref|NP_001261102.1| bancal, isoform F [Drosophila melanogaster]
gi|21626883|gb|AAF57450.2| bancal, isoform A [Drosophila melanogaster]
gi|189182182|gb|ACD81867.1| LP16172p [Drosophila melanogaster]
gi|440214543|gb|AGB93634.1| bancal, isoform F [Drosophila melanogaster]
Length = 496
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 169
Query: 355 SGTL 358
G +
Sbjct: 170 KGAI 173
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q +++ R + ++ + G +IGK G + L+ + G V +P +R++TVT GP
Sbjct: 15 QAQITLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLTVT---GPL 71
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA-----RLVVASNQVGCLLGKGG 297
+ S +A LV L++G + G+ G++ N RL+++ NQ+G ++G+ G
Sbjct: 72 TGIS---EAYGLVADGLVKGAPQMGMG-----GVVANPNTHPIRLLISHNQMGTIIGRQG 123
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
I +++ +G +R+++ + + S +R+V+I G V+ AV+ + L D+ G
Sbjct: 124 LKIKQIQDASG--VRMVAQKEMLPQS-TERIVEIQGTPDGVQKAVWEIGKCLIDDQERG 179
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK ++ ++ E+GA S+ + C ER+IT+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSI--SEGNCPERIITLT---GPTCAI 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA ++ ++L E + + ++ V RLVV + Q G L+GKGG I E+R+
Sbjct: 69 F---KAFAMMINKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 306 VTGTSIRIISDQL 318
TG +++ D L
Sbjct: 126 STGAQVQVSGDML 138
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L + +N +GC++G+ G I+E+R+++G I+I + + R V I+G + + A
Sbjct: 284 LTIPNNLIGCIIGRQGVNINEIRQMSGAQIKIAN----PVEGSSGRQVTITGSAASISLA 339
Query: 342 VYNVTGRL 349
Y + RL
Sbjct: 340 QYLINARL 347
>gi|302406408|ref|XP_003001040.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261360298|gb|EEY22726.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 359
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 44 QAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEAI 103
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SR A +V L+EG G+ +L+++ NQ+G ++G+ G I
Sbjct: 104 SR------AYAIVAQALLEGAPSLGMGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIKH 157
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
++ V+G +R+++ + + S +R+V++ G ++ A++ ++ L D+
Sbjct: 158 IQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPDGIRAAIWEISKCLVDD 204
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 1/117 (0%)
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
V+A E P+S PA ++ V R+I+G + G V+ RL+V ++Q G L+G
Sbjct: 2 VSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIG 61
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
K G + +++ + +R++ + L S ++DRVV++ GE V AV + +LR
Sbjct: 62 KQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLR 118
>gi|195401727|ref|XP_002059464.1| GJ17213 [Drosophila virilis]
gi|194142470|gb|EDW58876.1| GJ17213 [Drosophila virilis]
Length = 511
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 36/188 (19%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +S V S+
Sbjct: 16 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVS--------------VDDSQ 61
Query: 240 GPES--RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
GPE + S + + + + +++ E+ +F + RL++ + GC++GKGG
Sbjct: 62 GPERTIQISTDIDSTLEIITEMLKYFEERDEEF--------DVRLLIHQSLAGCVIGKGG 113
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I E+R G + LK S DRVVQ G+ S+V DAV V RD
Sbjct: 114 QKIKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIDAVREVITLTRDT 166
Query: 353 HFSGTLNT 360
G ++
Sbjct: 167 PIKGPIHN 174
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 219 ISVGATMPECDERLITVTASEGPESRYSPAQKAVVL-VFSRLIE------------GTSE 265
+ V +P CDER++T+ ++ +R + V F L +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 266 KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKC--IS 323
D S +V R++V S+Q+G L+GKGG II +R T IR+ +D L C
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRVRNDNLPMCALAL 120
Query: 324 ENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+D ++QI G+ S V++A+Y V L +N
Sbjct: 121 SHDELLQIIGDPSAVREALYQVAFLLYNN 149
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S G
Sbjct: 17 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTGA---- 70
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
AV ++ +L E + S V RLV+ ++Q G L+GK G I E+R+
Sbjct: 71 --VFHAVSMIAFKLDEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRE 128
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 129 STGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 158
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
>gi|326935642|ref|XP_003213877.1| PREDICTED: poly(rC)-binding protein 2-like, partial [Meleagris
gallopavo]
Length = 168
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVF 256
VG++IGKG ++ + ++ E+GA I++ C ER+IT+ GP + KA ++
Sbjct: 1 VGSIIGKGKSV-KKMREESGARINISEG--NCPERIITLA---GPTNAIF---KAFAMII 51
Query: 257 SRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISD 316
+L E S + ++ V RLVV ++Q G L+GKGG I E+R+ TG +++ D
Sbjct: 52 DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 111
Query: 317 QLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSS 368
L + +R + I+G + + V + + ++ G R + +SS
Sbjct: 112 MLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSS 160
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASE 239
++ + S RILC+++ +G+VIGK G +R ++ + GA I V + ERLI V+++E
Sbjct: 207 SENGDKSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNE 266
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKG---------LDFSSNKGLLVNARLVVASNQVG 290
P SP +A++L+ +++ ++ L S N + R++ AS +G
Sbjct: 267 IPTEPISPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSI--RILCASELIG 324
Query: 291 CLLGKGGTIISEMRKVTGTSIRI 313
++GK G + + + TG I++
Sbjct: 325 SVIGKSGANVRRVEQQTGARIKV 347
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 27/239 (11%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 38 DEEYAQAQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTITG 97
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
KA +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 98 G------CDAISKAYAIVARALLEGAPTLGMGGVVQSNGTHPIKLLISHNQMGTIIGREG 151
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G + D L + N+RVV++ G ++ AV+ + L D+
Sbjct: 152 LKIKHIQDVSGVRMVAQKDMLPQS---NERVVEVQGTPEGIQRAVWEICKCLIDDW---- 204
Query: 358 LNTARTRSTSSVLTETSPYSRLK----DPASFG--VHSSVAVSHDF-SQPPLTQDGNWS 409
R+T +VL +P R + P + G ++S D+ S P +T+ GN +
Sbjct: 205 -----QRATGTVL--YNPAVRTQPGGAPPLTTGGPGYNSTGARGDYGSSPRVTRTGNGA 256
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 11/148 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+ A I++ + C ER+IT+T + E +
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINI--SEGSCPERIITITGAT--ECVF 60
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+A ++ +L E + + + V RLV+ ++Q G L+GKGG+ I E+R+
Sbjct: 61 ----RAFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRE 116
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V ISG
Sbjct: 117 KTGAQVQVAGDLLP---NSTERGVTISG 141
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 83/262 (31%)
Query: 167 LSLESDRVATL--DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GA 223
+ LE D A + T + V+ R++ + G++IGKGG+ I+ ++ + GA + V G
Sbjct: 68 IKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVAGD 127
Query: 224 TMPECDERLITVTAS----------------EGPES------RYSPAQKAVVLVFSRLIE 261
+P ER +T++ S E P R SPA AV+L +++ E
Sbjct: 128 LLPNSTERGVTISGSQDAIIQCVKLICTVILESPPKGATIPYRPSPAPGAVLLAGNQVFE 187
Query: 262 ----------GTSEKGLDF-----------------------SSNKGL------------ 276
++ GLD S +GL
Sbjct: 188 TSEFASHPLFSVAQGGLDLQQAYTVQNQYGIPHSELAKLHQLSMQQGLGPIAQATATQVL 247
Query: 277 ---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDR 327
+ L++ ++ +G ++G+ GT I+E+R+V+G I+I S + S +DR
Sbjct: 248 PAGIESSSQTASQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGS----QLDSTSDR 303
Query: 328 VVQISGEFSKVKDAVYNVTGRL 349
V I+G + A Y +T L
Sbjct: 304 HVTITGSPISINLAQYLITSCL 325
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 35/215 (16%)
Query: 129 AVSQE--ILPDLHVDILSQRNSVLTTAPSSSISYVSA----VRPLSLESDRVATLDARTQ 182
AV+Q+ ++P L++ L ++ L+ PSS+ + +A P +L V L TQ
Sbjct: 342 AVNQQANLIPGLNLSALGIFSTGLSMLPSSAGARGAAAAAPYHPFALPEQEVVNLFIPTQ 401
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 402 -------------AVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGP--P 446
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S G ++GKGG ++
Sbjct: 447 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVN 497
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 498 ELQNLTSAEVIVPRDQ---TPDENEEVIVKIIGHF 529
>gi|240281620|gb|EER45123.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 275
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT
Sbjct: 36 DEEYAQSTLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT- 94
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKG 296
GP KA +V L+EG + G+ +SN G RL+++ NQ+G ++G+
Sbjct: 95 --GP---LQGTAKAYAIVAKGLLEGAPQLGMGGVASNNGTHP-VRLLISHNQMGTIIGRQ 148
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
G I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ G
Sbjct: 149 GLKIKYIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRG 205
Query: 357 TLNTARTRSTSSVLTETSPYSRLKDPASFGVHSS 390
T + + + P + L AS G +
Sbjct: 206 TGTVLYNPAVRASVGGGPPNNSLGSGASTGGYGG 239
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 879 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 935
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 936 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 986
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 987 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 1018
>gi|328774304|gb|EGF84341.1| hypothetical protein BATDEDRAFT_8525 [Batrachochytrium
dendrobatidis JAM81]
Length = 343
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
DA E++ R L S + G VIGKGG + ++ A + V +P ER++TV
Sbjct: 5 DAAETVPEMTLRSLVSTKEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERILTVV- 63
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEG----TSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
GP + KA L+ L+E TS LD + + RL+VA +G ++
Sbjct: 64 --GPLPNVA---KAYALIAKNLLESTQTITSNGNLDSTEESTAI---RLLVAHQLIGSII 115
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
GK G I E+++ +G I ++S +++ +E RVV+I G + A+Y++
Sbjct: 116 GKAGAKIREIQEASGAKI-VVSKEMMPQSTE--RVVEIYGLVDAIHIAIYHI 164
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
+ V S+ +GCL+GKGG+ I+++R+++G + + + NDR + I G
Sbjct: 257 MTVQSDMIGCLMGKGGSHITQIRRLSGAKLHVAE----QVSGRNDREITIVG 304
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-----MPECDERLITVTAS 238
QE +F + N VGA+IG G+ IR + +GA + + + + ++R +T+ S
Sbjct: 404 QETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGS 462
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G + + + + ++V S QVG ++GKGG
Sbjct: 463 --PESQW----KAQYLIFEKM----REEGF-VAGTEDVRLTIEILVPSTQVGRIIGKGGQ 511
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q ++ + VQI G F V+ A
Sbjct: 512 NVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSA 554
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + A + S+GA E+ IT+
Sbjct: 183 RQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAA-----EKAITI 237
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + +K ++E T ++ S + ++ R++ +N +G ++GK
Sbjct: 238 YGN--PENCTNACKK--------IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGK 284
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GGT I ++ + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 285 GGTTIKKIMQDTDTKITVSSINDINNFNL-ERIITVKGSIDNMSKAESMISNKLRQSY 341
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
>gi|330917577|ref|XP_003297863.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
gi|311329164|gb|EFQ93994.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
Length = 371
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 169 LESDRVATLDARTQQQ----EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT 224
L D + + RT+++ +++ R + S+ + G +IGK G + L+ E G V
Sbjct: 24 LNMDGESEVAPRTEEEYAESQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKV 83
Query: 225 MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVV 284
+ +R+++VT S S KA L L+EG G+ RL++
Sbjct: 84 VQGVHDRVLSVTGS------LSGISKAYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLI 137
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYN 344
+ NQ+G ++G+ G I +++ +G +R+++ + + S +R+V++ G + ++ AV+
Sbjct: 138 SHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQS-TERIVEVQGSPAGIEKAVWE 194
Query: 345 VTGRLRDNHFSG 356
+ L D+H G
Sbjct: 195 IGKCLIDDHERG 206
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 19/183 (10%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP ++ + +R + V RIL + GAVIGKGG I+AL+++ A +S
Sbjct: 18 TNGKRPAEDADEQKSFKRSRNSDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYKASVS 77
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V ++ P ER+++++A + ++ + L E G+DF
Sbjct: 78 VPDSSGP---ERILSISAD------IETVGEILLKIIPTLEEYQQYNGMDFD------CE 122
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
RL++ + G ++G G I E+R+ T TSI++ + C DRVV + G+ +V
Sbjct: 123 LRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQE---CCPQSTDRVVLVGGKTERVV 179
Query: 340 DAV 342
+ +
Sbjct: 180 ECI 182
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
++ G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 352 YNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 407
Query: 330 QISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
ISG ++++A Y + ++ +SG L
Sbjct: 408 TISGTQDQIQNAQYLLQNSVK--QYSGHL 434
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT++ ++
Sbjct: 360 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITISGTQ 413
>gi|6687391|emb|CAB64936.1| heterogeneous nuclear ribonucleoprotein (hnRNP) [Drosophila
melanogaster]
Length = 496
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 17 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISAD- 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
++ + + + +++ E+ DF + RL++ + GC++GKGG
Sbjct: 74 ---------IESTLEIITEMLKYFEERDEDF--------DVRLLIHQSLAGCVIGKGGQK 116
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 117 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDTPI 169
Query: 355 SGTL 358
G +
Sbjct: 170 KGAI 173
>gi|198416446|ref|XP_002119674.1| PREDICTED: similar to rCG61051 [Ciona intestinalis]
Length = 465
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA--TMPECDERLIT 234
+D + ++ R+L ++G +IGK GT I +SE+GA I++ + ++PE R++T
Sbjct: 1 MDTDNEDMIITVRMLMIGKEIGGIIGKAGTNIAKFRSESGARITISSEQSVPE---RIVT 57
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
+T G KAV L+ ++ GL + + V RL+V ++Q G ++G
Sbjct: 58 ITGGRGQ------IHKAVELIAGKM-HSDINSGLSNCATNTVPVTIRLIVPASQCGSIIG 110
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV 338
KGG I E+R TG +I++ S+ L C ++R V +SG S +
Sbjct: 111 KGGVKIKEIRDTTGCAIQVQSEMLPNC---SERTVTLSGAPSTI 151
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L V + +GC++GKGG+ I E+R ++G I+I +++ K DR + I G + A
Sbjct: 280 LTVGNEFMGCIIGKGGSRIKEIRMLSGAQIQI--NKVEKEDESVDRKITIQGSAEAISLA 337
Query: 342 VYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAV 393
Y +T L N FSG + +T S S L P + GV SV+V
Sbjct: 338 YYLIT--LSVNMFSG--DKWQTESMRGQRDFGPTGSLLGQPPATGVFGSVSV 385
>gi|242058519|ref|XP_002458405.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
gi|241930380|gb|EES03525.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
Length = 343
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 151 TTAPSSSISYVSAVRPLSLESD---RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTI 207
T AP+ S +PL ++ + A QE+S I N KVG +IGK G
Sbjct: 117 TAAPAPDSQAGSDEKPLEAAAEAPQQERVAVAEAAAQEISRTIEVPNSKVGVLIGKAGET 176
Query: 208 IRALQSEAGAFISVGATMPECDERLIT--VTASEGPESRYSPAQKAVVLVFSRLIEGTSE 265
IR LQ +GA+I + A + D +T V P S KA L+ S + E +
Sbjct: 177 IRNLQKSSGAWIQI-AKHADVDSNALTRSVLLVGKPGS----VDKAEQLIESVIAEAEAA 231
Query: 266 KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
+G F S + + V +N++G ++GK G I +++ +G I I L+ ++
Sbjct: 232 RG--FGSGQSGSEQFDMAVPNNKIGLIIGKRGETIKDLQLKSGARIEFIPKIPLEGVTST 289
Query: 326 DRVVQISGEFSKVK 339
R+V+++G +++
Sbjct: 290 GRIVRVTGNKQQIE 303
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 29/166 (17%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV---GATMPECDERLITVTASEGP 241
+V ++L N G++IGKGG +I LQ+++ I + T P ER+I +T S
Sbjct: 21 KVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIA- 79
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKG----------LDFSSNKGLLVNARLVVASNQVGC 291
V V ++E SE+G LD + N+ L +++V + G
Sbjct: 80 ---------GVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQL----KMIVPNAAAGV 126
Query: 292 LLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
++GKGG+ I E++ +G +++ + I E R++ ++GEF++
Sbjct: 127 IIGKGGSNIKEIQDKSGAHVQVSQKKAQYAIDE--RILTVTGEFNE 170
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 173 RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CDE 230
+ LD +Q +++ N G +IGKGG+ I+ +Q ++GA + V + DE
Sbjct: 103 QYGVLDKNRNRQ---LKMIVPNAAAGVIIGKGGSNIKEIQDKSGAHVQVSQKKAQYAIDE 159
Query: 231 RLITVTA 237
R++TVT
Sbjct: 160 RILTVTG 166
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 23/161 (14%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGS------- 68
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
AV S + E +N G + V RLV+ ++Q G L+GK GT I
Sbjct: 69 ---TAAVFHAVSMIAFKLDEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
E+R+ TG +++ D L + +R V +SG V DA+
Sbjct: 126 EIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q +++ R + S + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 43 QSQLTLRAIVSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDRVLTVT---GPL 99
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S + KA LV L+EG + G+ RL+++ NQ+G ++G+ G I
Sbjct: 100 SGIA---KAYSLVAKGLLEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTIIGRQGLKIKH 156
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ V+G +R+++ + + S +R+V++ G + AV+ + L D+ GT
Sbjct: 157 IQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIDKAVWEIGKCLVDDWQRGT 208
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRY 245
R L SN G+VIGKGG I QS++GA I + P +R+I ++
Sbjct: 39 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILISGI------L 92
Query: 246 SPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
K V LV ++L+ E +E G D RLVV ++ G ++GKGG+II
Sbjct: 93 DDVLKGVELVLAKLLSELHTEDGDDVDPR----TKVRLVVPNSSCGSIIGKGGSIIKSFI 148
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN-HFSGTL 358
+ + I+ IS Q NDR+V ++G + A+ + +L D+ H+ T+
Sbjct: 149 EESQAGIK-ISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTM 202
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 31/180 (17%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMPECDERLI 233
+D RT+ R++ N G++IGKGG+II++ E+ A I + ++RL+
Sbjct: 118 VDPRTK-----VRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLV 172
Query: 234 TVTAS----------------EGP---ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNK 274
TVT + + P ++ ++P AV ++ + G + G F +NK
Sbjct: 173 TVTGTLEEQMRAIDLILSKLYDDPHYVQTMHAPFSYAV--AYNSMNYGANGAGGKFQNNK 230
Query: 275 GLLVNARLV-VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
N+ + VA +G ++G+GG I E+ +V+G I+ ISD+ NDR + I+G
Sbjct: 231 EDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIK-ISDRGDFMSGTNDRKIIITG 289
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-----MPECDERLITVTAS 238
QE +F + N VGA+IG G+ IR + +GA + + + + ++R +T+ S
Sbjct: 354 QETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGS 412
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G + + + ++V S QVG ++GKGG
Sbjct: 413 --PESQW----KAQYLIFEKM----REEGF-VGGTEDVRLTIEILVPSTQVGRIIGKGGQ 461
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q ++ + VQI G F V+ A
Sbjct: 462 NVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSA 504
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITVT 236
Q + RIL ++ VGA+IG+ G+ IR + A + S+GA E+ IT+
Sbjct: 134 QADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAA-----EKAITIY 188
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ PE+ + +K ++E T ++ S + ++ R++ +N +G ++GKG
Sbjct: 189 GN--PENCTNACKK--------IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGKG 235
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GT I ++ + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 236 GTTIKKIMQDTDTKITVSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSY 291
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGK G + L+ E G V +P +R++TVT
Sbjct: 41 DEDYAQSPLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG 100
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ KA +V L++ S G ++ G RL+++ NQ+G ++G+ G
Sbjct: 101 N------LDGVAKAYAMVAQTLVD--SPPGAIPTTPMGTHP-VRLLISHNQMGTIIGRQG 151
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 152 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGSADGIRQAIWEIGKCLVDDWQRGT 208
Query: 358 ---LNTARTRSTSSVLTETSP 375
L RS +S T +SP
Sbjct: 209 GTILYNPAVRSNTSHGTGSSP 229
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
PAQ A++ V S + + +S K D ++K NARL+VA++Q+G L+GKGG I +MR
Sbjct: 18 PAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGKGGNNIQKMRTE 77
Query: 307 TGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I D+L C D +V ISG+ VK A+Y+V+ L
Sbjct: 78 SGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFL 121
>gi|322707130|gb|EFY98709.1| KH domain RNA-binding protein [Metarhizium anisopliae ARSEF 23]
Length = 368
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 118/253 (46%), Gaps = 26/253 (10%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 39 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 99 ECDAISR------AYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQG 152
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ AV+ + L D+
Sbjct: 153 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPDGIQRAVWEICKCLVDDW---- 205
Query: 358 LNTARTRSTSSVLTETSPYSRLK-DPASFGV-HSSVAVSHDFSQPPLTQDGNWSS-SEGQ 414
R T +VL +P R + S G +++ D+ P + + GN + S G
Sbjct: 206 -----QRGTGTVL--YNPVVRTQAGSGSLGSNYNNGGGRSDYGSPRVMRTGNGADFSNGG 258
Query: 415 LRCWKRLESRSES 427
+R + R RS+S
Sbjct: 259 VRPFSR---RSDS 268
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 21/179 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA-------- 237
+ +RILC + +G+VIGK G +I +++ E+ A + V P +R+IT+
Sbjct: 36 IVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDV 95
Query: 238 -SEGPESRYSP---AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--ARLVVASNQVGC 291
+ + +P AQ A++ V + + + G S+K L +++V ++Q
Sbjct: 96 DVDDDFNHTNPLCAAQDALLKVHAAISNAVASLG---DSDKRLRDKEECQILVPASQSAN 152
Query: 292 LLGKGGTIISEMRKVTGTSIRIIS----DQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
++GK G I +R T TSI+II+ D C + D + I+GE VK A++ V+
Sbjct: 153 IIGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALFAVS 211
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ +E+ R+LC DK+G VIGKGG+ I++++ +GA I V T + DE +ITVTA+E
Sbjct: 302 SRYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTATE 360
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 20/216 (9%)
Query: 150 LTTAPSSSISYVSAVRPL----SLESDRVATLDART-------QQQEVSFRILCSNDKVG 198
+ P++ Y RPL E+ +VAT DA + + S + VG
Sbjct: 41 VAAPPTNEFGYGGQKRPLEDADQPETKKVATNDAFSGIGGMAGPPRSTSEEFKVPDGMVG 100
Query: 199 AVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSR 258
+IG+GG I LQ E+G I + +R +T+T PES Q A L+
Sbjct: 101 FIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGL--PES----IQTAKRLLTEI 154
Query: 259 LIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQL 318
+ +G + G+ V +V AS + G ++GKGG I +++ G + +I D
Sbjct: 155 VEKGRPAPAFHHNDGPGMTVQEIMVPAS-KAGLVIGKGGETIKSLQERAGVKMVMIQDGP 213
Query: 319 LKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+ D+ ++ISGE KV+ A V +RD F
Sbjct: 214 QNTGA--DKPLRISGEPFKVQQAKEMVMELIRDQGF 247
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 129 AVSQE--ILPDLHVDILSQRNSVLTTAPSS----SISYVSAVRPLSLESDRVATLDARTQ 182
AV+Q+ ++P L++ L ++ L+ PSS + + P +L V L TQ
Sbjct: 280 AVNQQANLIPGLNLSALGIFSTGLSMLPSSVGARGAAAAAPYHPFALPEQEVVNLFIPTQ 339
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 340 -------------AVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGP--P 384
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S G ++GKGG ++
Sbjct: 385 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVN 435
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 436 ELQNLTSAEVIVPRDQ---TPDENEEVIVKIIGHF 467
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESR 244
R+L SN G+VIGKGG + Q+++GA I + P +R+I VT S
Sbjct: 48 LRLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGS------ 101
Query: 245 YSPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ A L+ +L+ E +D +++ RLV+ ++ G ++GKGG I
Sbjct: 102 INEILTAANLILQKLLSEAEDNNDVDEKTSQ-----VRLVLPNSVCGGIIGKGGATIKSF 156
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGTLNTA 361
+ + SI++ S DQ+L +S DR+V I+G + A++ + +L D +++ N
Sbjct: 157 VEHSQASIKLSSQDQILPGVS--DRLVTITGTLEQQLRAIFLIVSKLAEDPNYAQYANAP 214
Query: 362 RTRSTSSV 369
+ + SV
Sbjct: 215 LSYTGGSV 222
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 75/237 (31%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA---TMPECDERLI 233
+D +T Q R++ N G +IGKGG I++ + A I + + +P +RL+
Sbjct: 126 VDEKTSQ----VRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGVSDRLV 181
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIE-------------------------------- 261
T+T + + R A+ L+ S+L E
Sbjct: 182 TITGTLEQQLR------AIFLIVSKLAEDPNYAQYANAPLSYTGGSVAGIQGIPGGYTPV 235
Query: 262 -------GTSEKGLDFSSNKGL----------------------LVNARLVVASNQVGCL 292
G+S G++ +NKGL L + ++ V ++VG +
Sbjct: 236 GYGLPNYGSSVYGVNARNNKGLMAPLVAMRSPLPIGVPLVASGALTSVKMAVPDDRVGVI 295
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G+ G I ++++V+G I+ ISD+ NDR V ISG V+ A + + RL
Sbjct: 296 VGRAGRTILDIQQVSGAKIK-ISDRGDFISGTNDRQVTISGPIDAVQHARHMLEQRL 351
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRY 245
++L +N G+VIGK G+II +++++ G + + T P ER++ + +
Sbjct: 21 KMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQ------ 74
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSS-NKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
A++++ ++ + T++ D + N R+VV + V ++GKGG I +++
Sbjct: 75 EQINNALLIILDKIRQITTQNFQDKQNINTAPKYTCRIVVPKSAVSAIIGKGGQQIKQLQ 134
Query: 305 KVTGTSIRIIS--DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTA 361
TG I+I S D L N+R++ I G F + D VT ++ D + LN
Sbjct: 135 DSTGAKIQISSREDGL------NERIISIIGPFESISDTAIKVTNSIQNDPNLKDLLNVI 188
Query: 362 RTRSTS 367
++ TS
Sbjct: 189 YSKDTS 194
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 22/187 (11%)
Query: 176 TLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV---GATMPECDERL 232
T+ + + V F+IL + GA+IGKGG I +Q++ A + + A P ER+
Sbjct: 33 TITLKPAKGNVHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERV 92
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEK--GLDFSSNKGLLVNAR-----LVVA 285
+ + ++++ VF + E EK + + +G ++ R ++V
Sbjct: 93 CLIVGT----------IESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQVKILVP 142
Query: 286 SNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
++ G ++GKGG+ I E++ TG I++ Q K ++ +R V ++GE S+ +DA+ +
Sbjct: 143 NSTAGMIIGKGGSFIKELKDTTGVFIQV--SQKSKELNLAERCVTVAGELSQTRDAIALI 200
Query: 346 TGRLRDN 352
++ ++
Sbjct: 201 LSKIAED 207
>gi|295660901|ref|XP_002791006.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280933|gb|EEH36499.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 42 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GP- 97
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
A KA +V L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 98 --LQGAAKAYAIVAKSLLEGAPQLGMGGVVSNNGTHP-VRLLISHNQMGTIIGRQGLKIK 154
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 155 YIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGT 207
>gi|225682425|gb|EEH20709.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 42 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GP- 97
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
A KA +V L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 98 --LQGAAKAYAIVAKSLLEGAPQLGMGGVVSNNGTHP-VRLLISHNQMGTIIGRQGLKIK 154
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 155 YIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGT 207
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 23/161 (14%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ + C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI--SEGSCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIIS 301
AV S + E ++N G + V RLV+ ++Q G L+GK GT I
Sbjct: 70 ----AAVFHAVSMIAFKLDEDLCSATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
E+R+ TG +++ D L + +R V +SG V DA+
Sbjct: 126 EIRETTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 647 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 703
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 704 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 754
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 755 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 786
>gi|170060296|ref|XP_001865738.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878802|gb|EDS42185.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 188
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 228 CDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASN 287
C ER++TV+ S S KA L+ + E S+ + ++ + RL+V ++
Sbjct: 16 CPERIVTVSGSR------SAIYKAFTLITKKFEEWCSQFQDNTNAQGKTQIPIRLIVPAS 69
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
Q G L+GKGG+ I E+R++TG SI++ S+ L + +R V +SG + +Y++
Sbjct: 70 QCGSLIGKGGSKIKEIREITGCSIQVASEMLP---NSTERAVTLSGSADSITQCIYHI 124
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 34/226 (15%)
Query: 129 AVSQE--ILPDLHVDILSQRNSVLTTAPSSS----ISYVSAVRPLSLESDRVATLDARTQ 182
AV+Q+ ++P L++ L ++ L+ PS++ + S P + S ++ L ++
Sbjct: 433 AVNQQANLIPGLNLSALGIFSTGLSMLPSTAGPHGATAASPYNPFASHSPYLSGLYGASR 492
Query: 183 -----------QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDE 230
+QEV + VGA+IGK G I+ L AGA I + A P+ E
Sbjct: 493 VGAFPHQHSVPEQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASE 551
Query: 231 RLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
R++ +T PE+++ KA +F +L E F+ + + + A + V S+ G
Sbjct: 552 RMVIITGP--PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIKVPSSAAG 600
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
++GKGG ++E++ +T + + DQ EN+ V V+I G F
Sbjct: 601 RVIGKGGKTVNELQNLTSAEVIVPRDQ---TPDENEEVIVKIIGHF 643
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 181 TQQQEVSF--RILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
TQ + + F RIL VGA+IGK G I+ L + + + + GA E+
Sbjct: 265 TQPKPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAA-----EKP 319
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
IT+ A+ PE RLI +K D + + +++ ++ VG L
Sbjct: 320 ITIHAT--PEGSSEAC---------RLILEIMQKEAD-ETKSAEEIPLKILAHNSLVGRL 367
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + TGT I I Q L I +R + + G +A + +LR+
Sbjct: 368 IGKEGRNLKKIEQDTGTKITISPLQDL-TIYNPERTITVKGSIEACSNAEVEIMKKLREA 426
Query: 353 H 353
+
Sbjct: 427 Y 427
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ + C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI--SEGSCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S+ V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 33/190 (17%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS------ 238
V+ R++ + G++IGK GT I+ ++ GA + V G +P ER +TV+
Sbjct: 102 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIIL 161
Query: 239 ----------EG--PESRYSPAQKAVVLVFSRL-------IEGTSEKGLDFSSNKGLLVN 279
EG + +Y A V +L + GLD S+ +
Sbjct: 162 CVRQICAVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTS---S 218
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
+V ++ +GC++G+ G+ ISE+R+++G I+I + + +R V I+G +
Sbjct: 219 QEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGN----QAEGAGERHVTITGSPVSIA 274
Query: 340 DAVYNVTGRL 349
A Y +T L
Sbjct: 275 LAQYLITACL 284
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 60.5 bits (145), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
PAQ A++ V S + + +S K D ++K NARL+VA++Q+G L+GKGG I +MR
Sbjct: 18 PAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGKGGNNIQKMRTE 77
Query: 307 TGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I D+L C D +V ISG+ VK A+Y+V+ L
Sbjct: 78 SGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFL 121
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 152 TAPSSS-ISYVSAVRPL----SLESDRVATLDAR-----------TQQQEVSFRILCSND 195
APSS+ Y RPL E+ +VAT D + + VS +
Sbjct: 42 AAPSSNEFGYGGQKRPLEDADQPETKKVATSDGKLLSFSAIGGMGGPPRSVSEEFKVPDG 101
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VG +IG+GG I LQ E+G I + +R +T+T PES +
Sbjct: 102 MVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGL--PES---------IQT 150
Query: 256 FSRLIEGTSEKGLD---FSSNKGLLVNAR-LVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
RL+ EKG F+ N G + + +++ +++ G ++GKGG I +++ G +
Sbjct: 151 AKRLLTEIVEKGRPAPAFNPNDGPGMTVQEIMIPASKAGLVIGKGGETIKSLQERAGVKM 210
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
+I D + D+ ++ISGE KV+ A V +RD F
Sbjct: 211 VMIQDGPQNTGA--DKPLRISGEPFKVQQAKEMVMDLIRDQGF 251
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 169 LESDRVATLDARTQQQ----EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT 224
L D + RT+++ +++ R + S+ + G +IGK G + L+ E G V
Sbjct: 24 LNMDGEGEVAPRTEEEYAESQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKV 83
Query: 225 MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVV 284
+ +R+++VT S S KA L L+EG G+ RL++
Sbjct: 84 VQGVHDRVLSVTGS------LSGISKAYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLI 137
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYN 344
+ NQ+G ++G+ G I +++ +G +R+++ + + S +R+V++ G + ++ AV+
Sbjct: 138 SHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQS-TERIVEVQGSPAGIEKAVWE 194
Query: 345 VTGRLRDNHFSG 356
+ L D+H G
Sbjct: 195 IGKCLIDDHERG 206
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ E+GA I++ C ER++T+T GP
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT---GPTDTI 70
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
A + F I + L S V RLVV ++Q G L+GKGG+ I EMR+
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSLATSKPP---VTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
P + +PA A + S L+ S+ GLD + L + ++ +GC++G+ GT I
Sbjct: 235 PLGQTTPAFPAFLSQTSFLVAFVSDPGLDATPPAS---THELTIPNDLIGCIIGRQGTKI 291
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+E+R+++G I+I + ++R + I+G + + A Y + RL
Sbjct: 292 NEIRQMSGAQIKIANAME----GSSERQITITGTPANISLAQYLINARL 336
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 447 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 503
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 504 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 554
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 555 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 586
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 30/182 (16%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 208 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 262
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 263 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 307
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 308 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACANAEIEIMKKL 366
Query: 350 RD 351
R+
Sbjct: 367 RE 368
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q S +I N +VG +IGKGG I+ LQ ++GA I + + P R + + +
Sbjct: 82 QGSSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGT-- 139
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV--VASNQVGCLLGKGGT 298
PE+ S A+K + V + G S G+ G + V + +N+VG ++GKGG
Sbjct: 140 PEAISS-AEKLINEVLAEAESGGS--GIVTRRFTGQAGSDEFVMKIPNNKVGLIIGKGGE 196
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA---VYNV---TGRLRDN 352
I M+ TG I++I L + +R ++I G +++ A VY V R+R+
Sbjct: 197 TIKNMQASTGARIQVIPLHLPPGDTSTERTLKIDGTPEQIESAKQLVYQVISGENRVRNP 256
Query: 353 HFSGTL--NTARTRSTSS----VLTETSPYSRLKDPASFGVHSSVAVSHDFSQ------P 400
SG ++R S+ T+ Y ++ G +S + ++ Q P
Sbjct: 257 AMSGGYPQQGYQSRPPSNWAPPAPTQQPGYGYVQP----GAYSGPSPQYNMPQQPYAGYP 312
Query: 401 PLTQDG---NWSSS 411
P DG NW S
Sbjct: 313 PQQPDGYSTNWDQS 326
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-----MPECDERLITVTAS 238
QE +F + N VGA+IG G+ IR + +GA + + + + ++R +T+ S
Sbjct: 404 QETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGS 462
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G + + + ++V S QVG ++GKGG
Sbjct: 463 --PESQW----KAQYLIFEKM----REEGF-VGGTEDVRLTIEILVPSTQVGRIIGKGGQ 511
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q ++ + VQI G F V+ A
Sbjct: 512 NVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSA 554
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + A + S+GA E+ IT+
Sbjct: 183 RQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAA-----EKAITI 237
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + +K ++E T ++ S + ++ R++ +N +G ++GK
Sbjct: 238 YGN--PENCTNACKK--------IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGK 284
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GGT I ++ + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 285 GGTTIKKIMQDTDTKITVSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSY 341
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPSTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|226289821|gb|EEH45305.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 11/176 (6%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 42 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GP- 97
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
A KA +V L+EG + G+ SN G RL+++ NQ+G ++G+ G I
Sbjct: 98 --LQGAAKAYAIVAKSLLEGAPQLGMGGVVSNNGTHP-VRLLISHNQMGTIIGRQGLKIK 154
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 155 YIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGT 207
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 60/186 (32%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGA-FISVGATMPECDERLITVTAS-EGPESR- 244
R+L S++++G +IG+ G I+ +Q +G ++ +P+ ER++ V + EG E
Sbjct: 133 VRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAV 192
Query: 245 -------------------YSPAQKAVV-----------------------------LVF 256
Y+PA +A V F
Sbjct: 193 WEIGKCLIDDWQRGTGTVLYNPAVRASVGGAPINNSLGSGGSSGGYGGRSYNRTGNGADF 252
Query: 257 SRLIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
S G S + ++N+G+ + + + S+ VGC++G+GG+ ISE+R+V+
Sbjct: 253 SDQTGGYSRRSNSDAANRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRVS 312
Query: 308 GTSIRI 313
G I I
Sbjct: 313 GARISI 318
>gi|327307466|ref|XP_003238424.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326458680|gb|EGD84133.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 367
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 45 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GPL 101
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA +V L+EG + G+ + RL+++ NQ+G ++G+ G I
Sbjct: 102 QGTS---KAYSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKY 158
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 159 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGT 210
>gi|346324545|gb|EGX94142.1| KH domain RNA-binding protein [Cordyceps militaris CM01]
Length = 420
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 39 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 99 GCDAISR------AYAIVARALLEGAPAMGMGGVVQGNGTHPIKLLISHNQMGTVIGRQG 152
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 153 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRALWEICKCLVDDWQRGT 209
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 17/163 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-----MPECDERLITVTAS 238
QE +F + N VGA+IG G+ IR + +GA + + + + ++R +T+ S
Sbjct: 404 QETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGS 462
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PES++ KA L+F ++ E+G + + + ++V S QVG ++GKGG
Sbjct: 463 --PESQW----KAQYLIFEKM----REEGF-VGGTEDVRLTIEILVPSTQVGRIIGKGGQ 511
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ Q ++ + VQI G F V+ A
Sbjct: 512 NVRELQRVTGSIIKLSEQQSTSPSADEEATVQIIGPFFSVQSA 554
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + A + S+GA E+ IT+
Sbjct: 183 RQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAA-----EKAITI 237
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + +K ++E T ++ S + ++ R++ +N +G ++GK
Sbjct: 238 YGN--PENCTNACKK--------IMEVTQQEAYGLSKGE---ISLRILAHNNLIGRIIGK 284
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GGT I ++ + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 285 GGTTIKKIMQDTDTKITVSSINDINNFNL-ERIITVKGSIDNMSKAESMISSKLRQSY 341
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 9/174 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+ +++ R + S+ + G +IGK G + L+ E G V + +R+++VT S
Sbjct: 42 EAQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGS---- 97
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA L L+EG G+ RL+++ NQ+G ++G+ G I +
Sbjct: 98 --LSGISKAYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQ 155
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
++ +G +R+++ + + S +RVV++ G + ++ AV+ + L D+H G
Sbjct: 156 IQDASG--VRMVAQKEMLPQS-TERVVEVQGSPAGIEKAVWEIGKCLIDDHERG 206
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+ RP ++ + +R + V RIL + GAVIGKGG I+AL+++ A +SV
Sbjct: 19 NGKRPAEDADEQKSFKRSRNCDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYKASVSV 78
Query: 222 -GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
++ P ER+++++A + ++ + L E G+DF
Sbjct: 79 PDSSGP---ERILSISAD------IKTVGEILLKIIPTLEEYQQYSGMDFD------CEL 123
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
RL++ + G ++G G I E+R+ T TSI++ + C DRVV + G+ +V +
Sbjct: 124 RLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQEC---CPQSTDRVVLVGGKMERVVE 180
Query: 341 AV 342
+
Sbjct: 181 CI 182
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
V+ ++ D G++IGKGG I+ ++ ++GA I + + ++R+IT+T ++
Sbjct: 359 VTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDRIITITGTQ 412
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-----MPECDERLITV 235
T QE +F + N VGA+IG G+ IR + +GA + + + ER +T+
Sbjct: 401 TDTQETAF-LYIPNSSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTI 459
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
S PES++ KA L+F ++ E G D + + ++V S QVG ++GK
Sbjct: 460 VGS--PESQW----KAQYLIFEKMREEGFVAGTD-----DVRLTIEILVPSAQVGRIIGK 508
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
GG + E+++VTG+ I++ Q ++ + V I G F V+ A
Sbjct: 509 GGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVHIIGPFFSVQSA 554
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL +D VGA+IG+ G+ IR + A + +VG+ E+ IT+
Sbjct: 183 RQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSL-----EKAITI 237
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + A K ++ V + S NKG + +++ +N +G ++GK
Sbjct: 238 YGN--PEN-CTNACKKILEVMQQEAN---------SINKG-EITLKILAHNNLIGRIIGK 284
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GGT I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 285 GGTTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGTIENMSKAESMISSKLRQSY 341
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|325087770|gb|EGC41080.1| KH domain RNA-binding protein [Ajellomyces capsulatus H88]
Length = 321
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT
Sbjct: 36 DEEYAQSTLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT- 94
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKG 296
GP KA +V L+EG + G+ +SN G RL+++ NQ+G ++G+
Sbjct: 95 --GP---LQGTAKAYAIVAKGLLEGAPQLGMGGVASNNGTH-PVRLLISHNQMGTIIGRQ 148
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
G I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ G
Sbjct: 149 GLKIKYIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRG 205
Query: 357 TLNTARTRSTSSVLTETSPYSRLKDPASFGVHSS 390
T + + + P + L AS G +
Sbjct: 206 TGTVLYNPAVRASVGGGPPNNSLGSGASTGGYGG 239
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|149018652|gb|EDL77293.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018654|gb|EDL77295.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018655|gb|EDL77296.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018656|gb|EDL77297.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018658|gb|EDL77299.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018659|gb|EDL77300.1| rCG25644, isoform CRA_a [Rattus norvegicus]
Length = 183
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ + C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI--SEGSCPERITTITGS------T 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + S V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAII 160
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 369 EQEV-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 425
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E EK F+ + + + A + V S+ G ++GKGG ++
Sbjct: 426 EAQF----KAQGRIFGKLKE---EK--FFTPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 476
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 477 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 508
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 357 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 412
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 413 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 463
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 464 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 496
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 28/254 (11%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + +++ R + S+ + G +IGKGG + L+ E G V + +R++T++
Sbjct: 42 DEEYAESQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISG 101
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKG 296
SR A +V L+EG + G+ SN G +L+++ NQ+G ++G+
Sbjct: 102 GCDSISR------AYSIVAKALLEGAPQMGMGGVVSNNGTHP-IKLLISHNQMGTIIGRQ 154
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
G I ++ V+G +R+++ + + S +R+V++ G ++ AV+ + L D+
Sbjct: 155 GLKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGNPEGIQKAVWEICKCLVDDW--- 208
Query: 357 TLNTARTRSTSSVLTETSPYSRLKDPASFGVHSS--VAVSHDFSQPPLTQDGNWSS-SEG 413
R T +VL +P R + S G+ ++ + + GN + SEG
Sbjct: 209 ------ARGTGTVL--YNPVVRTQTGGSGGMSQGNLGGTGREYGSSRVMRTGNGADFSEG 260
Query: 414 QLRCWKRLESRSES 427
R + R RS+S
Sbjct: 261 APRSYNR---RSDS 271
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLLP---NSTERAVTVSG----VPDAI 159
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 32/258 (12%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 39 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLD--FSSNKGLLVNA--RLVVASNQVGCLL 293
SR A +V L+EG G+ SN L + +L+++ NQ+G ++
Sbjct: 99 ECDAISR------AYAIVARALLEGAPAMGMGGIVQSNGTHLSSTAIKLLISHNQMGTII 152
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G+ G I ++ V+G +R+++ + + S +R+V++ G ++ AV+ + L D+
Sbjct: 153 GRQGLKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPDGIQRAVWEICKCLVDDW 209
Query: 354 FSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSV---AVSHDFSQPPLTQDGNWSS 410
R T +VL +P R + S G+ S+ D+ P + + GN +
Sbjct: 210 ---------QRGTGTVL--YNPVVRTQ-AGSGGLGSNYNNGGGRSDYGSPRVMRTGNGAD 257
Query: 411 -SEGQLRCWKRLESRSES 427
S G +R + R RS+S
Sbjct: 258 FSNGGVRPFSR---RSDS 272
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 174 VATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLI 233
V LD TQ F L ND +G VIG+ G+ I ++ +GA I +G ER +
Sbjct: 232 VPGLDPGTQTSSQEF--LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 234 TVTAS 238
T+T S
Sbjct: 290 TITGS 294
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
>gi|326470883|gb|EGD94892.1| KH domain RNA-binding protein [Trichophyton tonsurans CBS 112818]
gi|326478447|gb|EGE02457.1| KH domain RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 367
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 45 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GPL 101
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA +V L+EG + G+ + RL+++ NQ+G ++G+ G I
Sbjct: 102 QGTS---KAYSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKY 158
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 159 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGT 210
>gi|358348269|ref|XP_003638170.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|358348273|ref|XP_003638172.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504105|gb|AES85308.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|355504107|gb|AES85310.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
Length = 177
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRY 245
R L SN G+VIGKGG+ I QS++GA I + P +R+I V+ +
Sbjct: 39 RFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGA------I 92
Query: 246 SPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
+ +AV L+ S+L+ E SE D RL+V + G ++GKGG I
Sbjct: 93 NEVLRAVELILSKLLSELHSEDDNDVEPK----TKVRLIVPNGSCGGIIGKGGATIRSFI 148
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISG 333
+ + I+ IS Q +NDR+V ++G
Sbjct: 149 EESQAGIK-ISPQDNSYYGQNDRIVTVTG 176
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 134 ILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVAT--LDARTQQQEVSFRIL 191
+LP L+++ L + + PS S L + S AT L Q + + +
Sbjct: 366 LLPGLNLNALGLFPASTSGIPSPST--------LGVPSAAAATNYLPYGQQAETETVHLF 417
Query: 192 CSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-MPECDERLITVTASEGPESRYSPAQK 250
VGA+IGK G I+ L AGA I + P+ ER++ +T PE+++ K
Sbjct: 418 IPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGP--PEAQF----K 471
Query: 251 AVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
A ++ +L E F + + + A + V S G ++GKGG ++E++ +T
Sbjct: 472 AQGRIYGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAE 526
Query: 311 IRIISDQLLKCISENDRV-VQISGEF 335
+ + DQ+ END V V+I+G F
Sbjct: 527 VVVPRDQIP---DENDEVIVKITGHF 549
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
+ Q ++ R+L VGA+IGK G IR + + + I + GA+ E+
Sbjct: 191 GQNHQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAS-----EKP 245
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
IT+ AS PE S A K ++ + + + T F+ + +++ +N VG L
Sbjct: 246 ITIHAS--PEG-CSTACKIIMEIMQKEAQDTK-----FTDE----IPLKILAHNNFVGRL 293
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I Q L + +R + + G A + ++R++
Sbjct: 294 IGKEGRNLKKIEQDTDTKITISPLQEL-TLYNPERTITVKGSIETCGKAEEEIMKKIRES 352
Query: 353 HFS 355
+ S
Sbjct: 353 YES 355
>gi|195029383|ref|XP_001987553.1| GH21981 [Drosophila grimshawi]
gi|193903553|gb|EDW02420.1| GH21981 [Drosophila grimshawi]
Length = 512
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 32/184 (17%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E RIL + GAVIGKGG I+ ++++ A +SV + + ER I ++A
Sbjct: 16 RNRRNEDMVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQISADI 73
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
+ + + + +++ E+ +F + RL++ + GC++GKGG
Sbjct: 74 ----------DSTLEIITEMLKYFEERDDEF--------DVRLLIHQSLAGCVIGKGGQK 115
Query: 300 ISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
I E+R G + LK S DRVVQ G+ ++V DAV V RD
Sbjct: 116 IKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQTQVIDAVREVITLTRDTPI 168
Query: 355 SGTL 358
G +
Sbjct: 169 KGPI 172
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 42 DEEYAQTTLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITG 101
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
KA +V L+EG G+ + +L+++ NQ+G ++G+ G
Sbjct: 102 G------CDAVSKAYAVVARSLLEGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQG 155
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +RVV++ G ++ AV+ + L D+ GT
Sbjct: 156 LKIKHIQDVSG--VRMVAQKEMLPQS-TERVVEVQGTPEGIQRAVWEICKCLVDDWQRGT 212
>gi|351709601|gb|EHB12520.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Heterocephalus
glaber]
Length = 493
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 320 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 376
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 377 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 427
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 428 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 459
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 33/252 (13%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL +++ AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T S +A++ V ++
Sbjct: 63 GGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGS----------VEAIMAVMDFIM 112
Query: 261 EG-------TSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
E TS+ +DF S K +++V ++ G ++GK G I ++++ +G+
Sbjct: 113 EKIREKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSY 172
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT-LNTARTRSTSSV 369
++I Q K +S +R + + GE ++A+ + ++ D+ SGT LN + + V
Sbjct: 173 VQI--SQKAKDLSLQERCITVIGEKENNRNALLMILAKVADDPQSGTCLNVSYADVSGPV 230
Query: 370 LTET---SPYSR 378
SPY++
Sbjct: 231 ANYNPTGSPYAQ 242
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 357 EQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGP--P 413
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S G ++GKGG ++
Sbjct: 414 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVN 464
Query: 302 EMRKVTGTSIRIISDQLLKCISENDR-VVQISGEF 335
E++ +T + + DQ EN+ VV+I G F
Sbjct: 465 ELQNLTSAEVIVPRDQ---TPDENEEVVVKIIGHF 496
>gi|260814700|ref|XP_002602052.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
gi|229287357|gb|EEN58064.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
Length = 499
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 23/165 (13%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPES 243
V RIL + GA+IGK G I+ L+SE A ++V P+C ER++T++A
Sbjct: 43 VDLRILLQSKNAGAIIGKQGLNIKRLRSEYKATVTV----PDCTGPERILTISADLNTAC 98
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA--RLVVASNQVGCLLGKGGTIIS 301
A +L ++E + + +K L N R++V +Q GC++G+ G I
Sbjct: 99 -------ACLLDIIPVLEDYQKH---YQEHKDLNFNCELRMLVHQSQAGCIIGRAGFKIK 148
Query: 302 EMRKVTGTSIRIISDQLLKCI-SENDRVVQISGEFSKVKDAVYNV 345
E+R+ T +I++ S+ C+ +RVV ++G+ K A+ +
Sbjct: 149 ELREQTEANIKVYSE----CMPGSTERVVALTGKPEKCVGAIKKI 189
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 42 DEEYAQTTLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITG 101
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
KA +V L+EG G+ + +L+++ NQ+G ++G+ G
Sbjct: 102 G------CDAVSKAYAVVARSLLEGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQG 155
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +RVV++ G ++ AV+ + L D+ GT
Sbjct: 156 LKIKHIQDVSG--VRMVAQKEMLPQS-TERVVEVQGTPEGIQRAVWEICKCLVDDWQRGT 212
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 26/172 (15%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEG 240
Q +V+FR+L S++K G VIGKGG I+ L+SE A +++ P+ +R++ + A+
Sbjct: 6 QSQVTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNI----PDSSGPDRVLQIVAN-- 59
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG--LLVNARLVVASNQVGCLLGKGGT 298
+++ + + LI E+ FS + ++V ++QVG ++G+GG+
Sbjct: 60 -------SRENGLDIIKELIPLIREEVSPFSDGEADPYTTTLSVLVQTSQVGAIIGRGGS 112
Query: 299 IISEMRKVTGTSIRIISDQLLKCI-SENDRVVQISGEFSKVKDAVYNVTGRL 349
I E+R+ T T +++ L +C+ +R VQI+G DAV G +
Sbjct: 113 KIKELRQSTETKVKV----LQECLPYSTERRVQING----APDAVLLAIGEI 156
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ND VGAVIG+GG IR ++S + A I + +PE ++R+IT+ ++
Sbjct: 269 QVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAEDRVITIRGTQ 319
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 26/206 (12%)
Query: 134 ILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVAT--LDARTQQQEVSFRIL 191
+LP L+++ L + + PS S L + S AT L Q + + +
Sbjct: 366 LLPGLNLNALGLFPASTSGIPSPST--------LGVPSAAAATNYLPYGQQAETETVHLF 417
Query: 192 CSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT-MPECDERLITVTASEGPESRYSPAQK 250
VGA+IGK G I+ L AGA I + P+ ER++ +T PE+++ K
Sbjct: 418 IPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITGP--PEAQF----K 471
Query: 251 AVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
A ++ +L E F + + + A++ V S G ++GKGG ++E++ +T
Sbjct: 472 AQGRIYGKLKEENF-----FGPKEEVKLEAQIKVPSYAAGRVIGKGGKTVNELQNLTSAE 526
Query: 311 IRIISDQLLKCISENDRV-VQISGEF 335
+ + DQ+ END V V+I+G F
Sbjct: 527 VVVPRDQIP---DENDEVIVKITGHF 549
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
+ Q +V R+L VGA+IGK G IR + + + I + GA+ E+
Sbjct: 191 GQNHQNDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAS-----EKP 245
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
IT+ AS PE S A K ++ + + + T F+ + +++ +N VG L
Sbjct: 246 ITIHAS--PEG-CSTACKIIMEIMQKEAQDTK-----FTDE----IPLKILAHNNFVGRL 293
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I Q L + +R + + G A + ++R++
Sbjct: 294 IGKEGRNLKKIEQDTDTKITISPLQEL-TLYNPERTITVKGSIETCGKAEEEIMKKIRES 352
Query: 353 HFS 355
+ S
Sbjct: 353 YES 355
>gi|302654659|ref|XP_003019130.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
gi|291182834|gb|EFE38485.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 57 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GPL 113
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA +V L+EG + G+ + RL+++ NQ+G ++G+ G I
Sbjct: 114 QGTS---KAYSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKY 170
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 171 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGT 222
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTA 237
A+ +QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 398 AQYPEQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 456
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG
Sbjct: 457 P--PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGG 505
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
++E++ +T + + DQ EN+ V V+I G F
Sbjct: 506 KTVNELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 541
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT
Sbjct: 36 DEEYAQSTLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT- 94
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKG 296
GP KA +V L+EG + G+ +SN G RL+++ NQ+G ++G+
Sbjct: 95 --GP---LQGTAKAYAIVAKGLLEGAPQLGMGGVASNNGTHP-VRLLISHNQMGTIIGRQ 148
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
G I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ G
Sbjct: 149 GLKIKYIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRG 205
Query: 357 T 357
T
Sbjct: 206 T 206
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 87/174 (50%), Gaps = 9/174 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
+ +++ R + S+ + G +IGK G + L+ E G V + +R+++VT S
Sbjct: 42 EAQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGS---- 97
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA L L+EG G+ RL+++ NQ+G ++G+ G I +
Sbjct: 98 --LSGISKAYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQ 155
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
++ +G +R+++ + + S +R+V++ G + ++ AV+ + L D+H G
Sbjct: 156 IQDASG--VRMVAQKEMLPQS-TERIVEVQGSPAGIEKAVWEIGKCLIDDHERG 206
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
V+A E P+ PA ++ V +++ D +S G V RL+VA Q G L+G
Sbjct: 2 VSAKEEPDCSIPPAVDVLLRVHKQVVN-VDPHPADSASGAGRPVVTRLLVADTQAGSLIG 60
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNVTGRLR 350
K G+ I + TG +IRI+ + L + +D VV+I GE S V AV V LR
Sbjct: 61 KQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLR 117
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 424 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 480
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 481 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 531
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 532 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 563
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 30/182 (16%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 185 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 239
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 240 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 284
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 285 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACANAEIEIMKKL 343
Query: 350 RD 351
R+
Sbjct: 344 RE 345
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEV-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 331 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEV 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 26/255 (10%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 40 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 99
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 100 GCDAISR------AYAIVARALLEGAPAMGMGGIVQSNGTHPIKLLISHNQMGTIIGRQG 153
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+
Sbjct: 154 LKIKHIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAVWEICKCLVDDW---- 206
Query: 358 LNTARTRSTSSVL----TETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSS-SE 412
R T +VL T P S + +S + ++ P + + GN + S
Sbjct: 207 -----QRGTGTVLYNPVVRTQPASSTSVGSGGAGYSQGSGRSEYGSPRVMRTGNGADFSN 261
Query: 413 GQLRCWKRLESRSES 427
G R + R RS+S
Sbjct: 262 GSSRPYNR---RSDS 273
>gi|47229298|emb|CAG04050.1| unnamed protein product [Tetraodon nigroviridis]
Length = 455
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 185 EVSFRILCSN------DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
+V F + SN +VG++IGK G ++ ++ E+GA I++ C ER+IT+
Sbjct: 34 KVCFGFVSSNFTFGLLQEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA-- 89
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
GP + KA ++ +L E S + ++ V RLVV ++Q G L+GKGG
Sbjct: 90 -GPTTSIF---KAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGC 145
Query: 299 IISEMRKVTGTS 310
I E+R+V+G +
Sbjct: 146 KIKEIREVSGVA 157
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT
Sbjct: 40 DEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT- 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
GP S KA +V L+EG + G+ + RL+++ NQ+G ++G+ G
Sbjct: 99 --GPLQGTS---KAYSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQG 153
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 154 LKIKYIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGT 210
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 315 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 371
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 372 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 422
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 423 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 454
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 205 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 262
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A V + +L E L +++ G +
Sbjct: 263 ----VEACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEI 318
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 319 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 375
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 376 KAQGRIFGKLKEENF 390
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 119 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 173
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 174 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 218
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 219 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACANAEVEIMKKL 277
Query: 350 RDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFG 386
R+ + L +V T + +S L P FG
Sbjct: 278 REAFENDML---------AVNTHSGYFSSLYPPHQFG 305
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 363 EQEV-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 419
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 420 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 470
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 471 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 502
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
PAQ A++ V S + + +S K D ++K NARL+VA++Q+G L+GKGG I +MR
Sbjct: 18 PAQDALLRVHSVIAQESSAKDKDSDADKKGQQNARLLVANSQIGSLIGKGGNNIQKMRTE 77
Query: 307 TGTSIRII-SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
+G I+I D+L C D +V ISG+ + VK A+Y V+ L
Sbjct: 78 SGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKALYAVSAFL 121
>gi|346473549|gb|AEO36619.1| hypothetical protein [Amblyomma maculatum]
Length = 320
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC--DERLITVTASEGPES 243
V R L + GA+IGKGGT I +L+ E A ISV P+C ER++++ A
Sbjct: 39 VDVRFLLQSRNAGAIIGKGGTNINSLRKEFKASISV----PDCPGPERILSIVAD----- 89
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
++ + +L + G N G RL++ + GC++G+ G I E+
Sbjct: 90 -LDTLGDILLNIIPKLDDFAQHTG----QNGGSESEMRLLMHQSHAGCIIGRAGCRIKEL 144
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
R+ TG +I++ C +R+V+++G + V D + +
Sbjct: 145 RESTGANIKVHGSC---CPGSTERIVKVTGSPAVVVDCIKQI 183
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 155 SSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSE 214
S+ + +++ PLS +S A + Q S +I N +VG +IGK G IR +Q +
Sbjct: 113 SAGGGHGASIPPLSSQSS--APQYSYGGHQGTSKKIEIPNGRVGVIIGKAGETIRYIQLQ 170
Query: 215 AGAFISVGATMPECDERLIT--VTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLD 269
+GA I V E + +T V S PE + S A++ + V + G+S G
Sbjct: 171 SGAKIQVTRDH-EAEPGALTRQVELSGNPE-QISKAEQLIKEVIAEADAGSSGAVSGGRK 228
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+++ + ++ +A+N+VG ++GKGG I M+ +G I++I L + +R V
Sbjct: 229 YNAPQPGAETFQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTSTERTV 288
Query: 330 QISGEFSKVKDA 341
I G +++ A
Sbjct: 289 HIDGTQEQIEHA 300
>gi|340522569|gb|EGR52802.1| predicted protein [Trichoderma reesei QM6a]
Length = 369
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 39 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 99 GCDAISR------AYAIVARALLEGAPVVGMGGVVQNNGTHPIKLLISHNQMGTIIGRQG 152
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G + D L + +R+V++ G ++ A++ ++ L D+ GT
Sbjct: 153 LKIKHIQDVSGVRMVAQKDMLPQS---TERIVEVQGTPEGIQRAIWEISKCLVDDWQRGT 209
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|171686672|ref|XP_001908277.1| hypothetical protein [Podospora anserina S mat+]
gi|170943297|emb|CAP68950.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 167 LSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP 226
L + + D Q +++ R + S+ + G +IGK G + L+ E G V +P
Sbjct: 39 LGPDGEPAPKTDEEYAQTQMTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVP 98
Query: 227 ECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVAS 286
+R++T+T G E+ KA V S L+EG G+ +L+++
Sbjct: 99 GVYDRVLTITG--GCEA----ISKAYAKVASALMEGAPAMGMGGVVAANGTHPIKLLISH 152
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
NQ+G ++G+ G I ++ V+G +R+++ + + S +RVV++ G ++ A + +
Sbjct: 153 NQMGTVIGRQGLKIKHIQDVSG--VRMVAQKEMLPQS-TERVVEVQGTPEGIQRATWEIC 209
Query: 347 GRLRDNHFSG 356
L D+ G
Sbjct: 210 KCLVDDWQRG 219
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 347 EQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGP--P 403
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S G ++GKGG ++
Sbjct: 404 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVN 454
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 455 ELQNLTSAEVIVPRDQ---TPDENEEVIVKIIGHF 486
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 430 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 485
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 486 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 536
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 537 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 569
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L ++G++IGK G ++ ++ ++ A I++ C ER+ T+T S R
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTDAVFR- 79
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
AV ++ +L E G D ++ V RLV+ ++Q G L+GK G I E+R+
Sbjct: 80 -----AVSMIAFKLEEDLG-AGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRE 133
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V +SG
Sbjct: 134 STGAQVQVAGDLLP---NSTERAVTVSG 158
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 155 SSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSE 214
+ + SY PL LD +Q F L ND +G +IG+ G+ I ++
Sbjct: 229 TDAYSYWRPTTPLLTSLSLPPGLDTSSQNSSQEF--LVPNDLIGCIIGRHGSKISEIRQM 286
Query: 215 AGAFISVGATMPECDERLITVTAS 238
+GA I +G ER +T+T S
Sbjct: 287 SGAHIKIGNQTEGSSERHVTITGS 310
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 359 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 415
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 416 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 466
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 467 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 498
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R Q +S + VG VIG+GG I LQ+E+G I + +R+ T+T +
Sbjct: 119 RPGQSSLSEEYAVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSGGLPDRMCTLTGN- 177
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKG 296
P++ ++A L+ R+IE +G S+ GL L++ SN+VG ++GKG
Sbjct: 178 -PQA----IERAKALI-DRIIE--RGQGPAVGSDGGLGDGNTTIELMIPSNKVGLVIGKG 229
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
G +I ++++ G + +I D S D+ +++SG+ K K A
Sbjct: 230 GEMIKKLQERAGVKMVMIQDATTSGTS--DKPLRVSGDPQKCKHA 272
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 363 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 419
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 420 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 470
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 471 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 502
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 320 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 376
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 377 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 427
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 428 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 459
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 210 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 267
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 268 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 323
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 324 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 380
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 381 KAQGRIFGKLKEENF 395
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 17/152 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRAL----QSEAGAFISVGATMPECDERLITVTASEGP 241
++ R+L +VG++IGK ++L QS A IS G C ER++T+T GP
Sbjct: 14 LTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEG----NCPERIVTIT---GP 66
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
KA ++ + E + + ++ V RLVV ++Q G L+GKGG+ I
Sbjct: 67 TDAIF---KAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
E+R+ TG +++ D L + +R V ISG
Sbjct: 124 EIRESTGAQVQVAGDMLP---NSTERAVTISG 152
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D ++ T + V+ R++ + G++IGKGG+
Sbjct: 61 VTITGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGS 120
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 121 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 153
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 369 EQEV-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 425
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 426 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 476
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 477 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 508
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEV-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|320034805|gb|EFW16748.1| KH domain RNA-binding protein [Coccidioides posadasii str.
Silveira]
Length = 345
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 45 QSMLTLRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GP- 100
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN-----ARLVVASNQVGCLLGKGG 297
KA +V L+EG + G+ G++ N RL+++ NQ+G ++G+ G
Sbjct: 101 --LQGTAKAYGMVAKSLLEGAPQMGMG-----GIIQNNGTHPVRLLISHNQMGTIIGRNG 153
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 154 LKIKCIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGT 210
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEGPES 243
S +I N +VG +IGKGG I+ LQ ++GA I V M P R++ + G
Sbjct: 141 SKKIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELM---GNPD 197
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ + A++ + V + G S + +G + + + +N+VG ++GKGG I M
Sbjct: 198 QIAKAEQLISEVLAEADVGGSGTVSRRFTGQGGSEHFVMKIPNNKVGLVIGKGGDSIKNM 257
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISG 333
+ TG I++I L + DR V I G
Sbjct: 258 QARTGARIQVIPLHLPPGDTSTDRNVHIEG 287
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 30/246 (12%)
Query: 161 VSAVRPLSL--ESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAF 218
+S +PL L D + + V F+IL + GA+IGKGG I +Q++ A
Sbjct: 1 MSGGKPLFLTEHHDDWTDVSPADYEGNVHFKILVPSIAAGAIIGKGGEAITDIQNKTSAK 60
Query: 219 ISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF--SSN 273
+ + P ER+ + + +++ VF + E EK S+N
Sbjct: 61 VKMSKANDFYPGTTERVCLIVGT----------IDSILRVFQYISEKIYEKPESILRSTN 110
Query: 274 KGLLVNA------RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDR 327
KG + A +++V ++ G ++GKGG+ I E+++ TG I++ Q K ++ +R
Sbjct: 111 KGGRMPAERHKQVKILVPNSTAGIIIGKGGSFIKEVKESTGVFIQV--SQKSKELNLAER 168
Query: 328 VVQISGEFSKVKDAVYNVTGRLRDNHFSGTL-NTART---RSTSSVLTETSPYSRLKDPA 383
V ++GE + +AV + ++ D+ S + N + R +S SPY+ + +
Sbjct: 169 CVTVAGELPQTFEAVKQLLFKIADDPQSSSCPNISYAEVPRPVASAYPTGSPYALVLG-S 227
Query: 384 SFGVHS 389
SFG+++
Sbjct: 228 SFGINN 233
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q S +I N +VG +IGKGG I+ LQ ++GA I V M P RL+ + G
Sbjct: 95 QGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELM---G 151
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV--VASNQVGCLLGKGGT 298
+ + A++ + V S G S G+ G + + V V +N+VG ++GKGG
Sbjct: 152 TPDQIAKAEQLINDVLSEAEAGGS--GIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGE 209
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
I M+ TG I++I L + +R VQI G +++ A
Sbjct: 210 TIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESA 252
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 419 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 474
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 475 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 525
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 526 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 558
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 358 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 414
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 415 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 465
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 466 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 497
>gi|429858530|gb|ELA33346.1| kh domain rna-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 377
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
+++ R + S+ + G +IGK G + L+ E G V + +R++T+T
Sbjct: 48 QLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG------E 101
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
KA +V L+EG G+ +L+++ NQ+G ++G+ G I ++
Sbjct: 102 IQAISKAYAIVAQALLEGAPAMGMGGVVQNNGTHPIKLLISHNQMGTIIGRQGLKIKHIQ 161
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
V+G +R+++ + + S +R+V++ G +K AV+ + L D+ GT
Sbjct: 162 DVSG--VRMVAQKEMLPQS-TERIVEVQGTPDGIKAAVWEICKCLVDDWQRGT 211
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A V + +L E L +++ G +
Sbjct: 331 ----VEACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEI 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 187 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 241
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 242 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 286
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 287 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACANAEVEIMKKL 345
Query: 350 RDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFG 386
R+ + L +V T + +S L P FG
Sbjct: 346 REAFENDML---------AVNTHSGYFSSLYPPHQFG 373
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 363 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 419
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 420 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 470
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 471 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 502
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 22/159 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV--GATMPECDERLITVT 236
R + +++ +G++IGK G+ I+ + E+ A I++ G+T ER+++VT
Sbjct: 20 GRGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGST----PERIVSVT 75
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGL--DFSSNKGLLVNARLVVASNQVGCLLG 294
+ + AVV F+ LI E L + SN V RL+V +Q G ++G
Sbjct: 76 GT----------KDAVVTAFA-LIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIG 124
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
KGG I E+R+V+G S+ +++ + L SE R V +SG
Sbjct: 125 KGGAKIKEIREVSGASV-VVAGEFLPGSSE--RAVTLSG 160
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 423 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 478
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 479 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 529
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 530 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 562
>gi|361123942|gb|EHK96076.1| putative RNA-binding protein rnc1 [Glarea lozoyensis 74030]
Length = 376
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + +++ R + S+ + G +IGKGG + L+ E G V + +R++T+
Sbjct: 44 DEEYAESQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGCKAGVSKVVQGVHDRVLTIAG 103
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G E+ KA +V L+EG + G+ + +L+++ NQ+G ++G+ G
Sbjct: 104 --GCEA----ISKAYAIVAKALLEGAPQMGMGGVVAQSGSHPIKLLISHNQMGTIIGRQG 157
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 158 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQKAVWEICKCLVDDWQRGT 214
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 116/254 (45%), Gaps = 27/254 (10%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 42 DQEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTITG 101
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G E+ +A V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 102 --GCEA----ISRAYAAVARSLLEGAPTMGMGGVIQNNGTHPIKLLISHNQMGTIIGRQG 155
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ AV+ + L D+
Sbjct: 156 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAVWEICKCLVDDW---- 208
Query: 358 LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHD---FSQPPLTQDGNWSS-SEG 413
R T +VL +P R + + G+ D + +T+ GN + S G
Sbjct: 209 -----QRGTGTVL--YNPVVRTQGVGAPGISGGSGYVQDRAPYGGSRVTRTGNGADFSNG 261
Query: 414 QLRCWKRLESRSES 427
R + R RS+S
Sbjct: 262 GPRSYNR---RSDS 272
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 363 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 419
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 420 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 470
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 471 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 502
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 405 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 461
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 462 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 512
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 513 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 544
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
>gi|119583084|gb|EAW62680.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_f [Homo
sapiens]
Length = 440
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 119
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 120 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVL 170
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 171 IGGKPDRVVECI 182
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 331 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 381 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 437
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 438 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 488
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 489 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 520
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 271 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 328
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 329 ----VEACANAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFSPFPHHHSYPEQEI 384
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 385 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 441
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 442 KAQGRIFGKLKEENF 456
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 291 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 347
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 348 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 398
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 399 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 430
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 320 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 376
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 377 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 427
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 428 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 459
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 210 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 267
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A V + +L E L +++ G +
Sbjct: 268 ----VEACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEI 323
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 324 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 380
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 381 KAQGRIFGKLKEENF 395
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 124 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 178
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 179 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 223
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 224 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACANAEVEIMKKL 282
Query: 350 RDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFG 386
R+ + L +V T + +S L P FG
Sbjct: 283 REAFENDML---------AVNTHSGYFSSLYPPHQFG 310
>gi|358387038|gb|EHK24633.1| hypothetical protein TRIVIDRAFT_54511 [Trichoderma virens Gv29-8]
Length = 369
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 39 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 99 GCDAISR------AYAIVARALLEGAPAVGMGGVIQSNGTHPIKLLISHNQMGTIIGRQG 152
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ A++ ++ L D+ GT
Sbjct: 153 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAIWEISKCLVDDWQRGT 209
>gi|315055291|ref|XP_003177020.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
gi|311338866|gb|EFQ98068.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
Length = 367
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 45 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GPL 101
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
S KA +V L+EG + G+ + RL+++ NQ+G ++G+ G I
Sbjct: 102 QGTS---KAYSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKY 158
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 159 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGT 210
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 425 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 481
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 482 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 532
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 533 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 564
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 351 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 406
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 407 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 457
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 458 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 490
>gi|156372967|ref|XP_001629306.1| predicted protein [Nematostella vectensis]
gi|156216303|gb|EDO37243.1| predicted protein [Nematostella vectensis]
Length = 419
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 27/161 (16%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS 246
+ RIL + G +IGKGGT IR L++E A ++V T +ER++T+TA
Sbjct: 54 TLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPDT--NSNERVLTITA--------- 102
Query: 247 PAQKAVVLVFSRLIE-GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
P Q A+ ++ + + G + G + +++V +QVG ++G+ G I E+R+
Sbjct: 103 PRQSALDILAEVVPKIGEVQYGHEI----------QMLVQRSQVGSIIGRAGYKIKEIRE 152
Query: 306 VTGTSIRIISDQLLKCI-SENDRVVQISGEFSKVKDAVYNV 345
+G ++++ +D C+ + +RVV +SG + V NV
Sbjct: 153 GSGANVKVFAD----CLPNSTERVVTMSGSAETIVKCVENV 189
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 369 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 425
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 426 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 476
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 477 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 508
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 156 SSISYVSAVRPLSLESDRVATLDARTQQQEVS-FRILCSNDKVGAVIGKGGTIIRALQSE 214
S S V A PL E A D + + E + +++ N KVG +IGK G IR LQ
Sbjct: 156 SQPSEVEAAPPLQEEDISNAEQDQPSSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQYN 215
Query: 215 AGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE----KGLDF 270
+GA I + RL G A++ + V + G S +GL
Sbjct: 216 SGAKIQIMRDAEADPNRLTRPVEIIGTSENIKKAEELINAVIAEADAGGSPSLIARGLTS 275
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
S + +L V + +VG ++G+GG I ++ +G I++I L + +R ++
Sbjct: 276 SHSIATAEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIR 335
Query: 331 ISGEFSKVK 339
++G+ +++
Sbjct: 336 VTGDKKQIE 344
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 369 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 425
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 426 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 476
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 477 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 508
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 370 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 425
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 426 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 476
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 477 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 509
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 331 ----VEACASAEIEIMKKLREAFENDMLAANTHSGYFSSLCPPHQFGPFPHHHSYPEQEI 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 39/217 (17%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 187 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 241
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 242 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 286
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G A + +L
Sbjct: 287 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACASAEIEIMKKL 345
Query: 350 RDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFG 386
R+ F + A T S +S L P FG
Sbjct: 346 REA-FENDMLAANTHSGY--------FSSLCPPHQFG 373
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 369 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 425
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 426 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 476
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 477 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 508
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 331 ----VEACANAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYPEQEI 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 39/217 (17%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++ +Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 187 SQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 241
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + + T E L ++ GL V
Sbjct: 242 VTIHAT--PEGT-SEACRMILEIMQKEADETKLAEEIPLKILAHNGL------------V 286
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 287 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTVEACANAEIEIMKKL 345
Query: 350 RDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFG 386
R+ + L +V T + +S L P FG
Sbjct: 346 REAFENDML---------AVNTHSGYFSSLYPPHQFG 373
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|395839833|ref|XP_003792780.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Otolemur garnettii]
Length = 441
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTA 237
A+ +QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 264 AQYPEQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 322
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG
Sbjct: 323 P--PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGG 371
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
++E++ +T + + DQ EN+ V V+I G F
Sbjct: 372 KTVNELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 407
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 424 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 480
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 481 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 531
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 532 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 563
>gi|119195161|ref|XP_001248184.1| hypothetical protein CIMG_01955 [Coccidioides immitis RS]
gi|303310665|ref|XP_003065344.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105006|gb|EER23199.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|392862573|gb|EAS36772.2| KH domain RNA-binding protein [Coccidioides immitis RS]
Length = 366
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 43/252 (17%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 45 QSMLTLRAIVSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GP- 100
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN-----ARLVVASNQVGCLLGKGG 297
KA +V L+EG + G+ G++ N RL+++ NQ+G ++G+ G
Sbjct: 101 --LQGTAKAYGMVAKSLLEGAPQMGMG-----GIIQNNGTHPVRLLISHNQMGTIIGRNG 153
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 154 LKIKCIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGT 210
Query: 358 -----------------LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQP 400
+N+A + + PY+R + A F H S
Sbjct: 211 GTVLYNPAVRANVGGASMNSAFVGPNPNTYS-GRPYNRTGNGADFSDHPGTYNRRHNSDA 269
Query: 401 P------LTQDG 406
P +T+DG
Sbjct: 270 PNRGIPLVTEDG 281
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 331 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 383 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 439
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 440 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 490
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 491 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 522
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 330
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 331 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 386
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 443
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 444 KAQGRIFGKLKEENF 458
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 401 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 457
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 458 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 508
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 509 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 540
>gi|357602329|gb|EHJ63352.1| hypothetical protein KGM_14186 [Danaus plexippus]
Length = 546
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTAS-EGPES 243
F++L + GA+IGKGG I LQ + GA + + + P ER +T S EG
Sbjct: 68 FKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGSVEG--- 124
Query: 244 RYSPAQKAVVLVFSRLIEGTSEK---------GLDFSSNKGLLVNARLVVASNQVGCLLG 294
+++V ++E EK G+D + +++V ++ G ++G
Sbjct: 125 --------IMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQVKILVPNSTAGMIIG 176
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
KGG I ++++ +G+ ++I Q K +S +R + + GE K A + ++ D+
Sbjct: 177 KGGNYIKQIKEQSGSYVQI--SQKAKELSLQERCITVVGEKENNKKACLMILQKVVDDPQ 234
Query: 355 SGT 357
SG+
Sbjct: 235 SGS 237
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 177 LDART-QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CDERLI 233
+DA+ Q ++ +IL N G +IGKGG I+ ++ ++G+++ + E ER I
Sbjct: 150 VDAKMPQDRDKQVKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCI 209
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIE 261
TV + E+ +KA +++ ++++
Sbjct: 210 TVVGEK--ENN----KKACLMILQKVVD 231
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRY 245
++L +N G+VIGK G+II +++++ G + + T P ER++ + +
Sbjct: 21 KMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQ------ 74
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSS-NKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
A++++ ++ + T++ D + N R+VV + V ++GKGG I +++
Sbjct: 75 EQINNALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQIKQLQ 134
Query: 305 KVTGTSIRIIS--DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTA 361
TG I+I S D L N+R++ I G F + D VT ++ D + LN
Sbjct: 135 DTTGAKIQISSREDGL------NERIISIIGPFESISDTAIKVTNSIQNDPNLKDLLNVI 188
Query: 362 RTR--------STSSVLTETSPYSRLKDPASFGV 387
++ S S P + P +GV
Sbjct: 189 YSKDANMNGRSSLSQNFVNQVPLNGYVVPQQYGV 222
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE +F + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 302 QETTF-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 361 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 409
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 410 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 453
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 81 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSV-----EKSITI 135
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ L S+NKG + +++ +N +G ++GK
Sbjct: 136 YGN--PENCTNACK--------RILEVMQQEAL--STNKGEIC-LKILAHNNLIGRIIGK 182
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 183 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 239
>gi|41053065|dbj|BAD08009.1| putative KH domain protein [Oryza sativa Japonica Group]
Length = 458
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-----------------GATMPECDE 230
FR++ + DKVG +IG+ G I+ L + A + V + +
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFIAKVTF 158
Query: 231 RLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLD--FSSNKGLLVNARLVVASNQ 288
++ ++A+E ++ PA A + +F I + D S + +A+L+V S Q
Sbjct: 159 EMVLISATEESQAELPPAMDAAIKIFMH-INDIEKINCDDTLSGSAPEKCSAKLLVPSAQ 217
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIISD-QLLKCISENDRVVQISGEFSKVKDAVYNVTG 347
L+GK G I +++ TG +++II +LL ++R+V I G KV A+ +V G
Sbjct: 218 ATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLG 277
Query: 348 RLR 350
LR
Sbjct: 278 VLR 280
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASE 239
++ R L SN G+VIGKGG+ I QS++GA I + P +R+I ++ +
Sbjct: 79 EKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGAT 138
Query: 240 GPESRYSPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ ++L+ E +E G + RL+V ++ G ++GKGG+
Sbjct: 139 ------NEIIKAMELILAKLLSEMHTEDGDEADPRS----KVRLIVPNSSCGGIIGKGGS 188
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + SI+ IS Q + DR+V + G + A+ + +L D H++
Sbjct: 189 TIKSFIEDSQASIK-ISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQF 247
Query: 358 LN 359
+N
Sbjct: 248 MN 249
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 426 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 482
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 483 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 533
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 534 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 565
>gi|403358770|gb|EJY79040.1| Far upstream element-binding protein [Oxytricha trifallax]
Length = 495
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
+F I ND VG +IGKGG IR LQ ++GA I V EC I EGP+ RY
Sbjct: 247 AAFIIPIPNDCVGLIIGKGGETIRNLQLQSGAKIQVAKK--ECQGNQIRNVFVEGPQERY 304
Query: 246 SPAQKAV--VLVFSRLIEGTSE-----KGLDFSSNKGLLVNARL--VVASNQVGCLLGKG 296
A+K + ++ +R + TS + F++ + + ++ G ++GK
Sbjct: 305 DLAKKLIDEIVNEARKLNKTSSLTTSGNNIAFTAEVNPFPGPHIPFSIPNSLTGLIIGKN 364
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
G I ++ G I I + N+R++++SG +++ A
Sbjct: 365 GDTIKQLHNKCGAYIFIPKQHDHQT---NERILELSGSEEQIERA 406
>gi|195119576|ref|XP_002004307.1| GI19683 [Drosophila mojavensis]
gi|193909375|gb|EDW08242.1| GI19683 [Drosophila mojavensis]
Length = 509
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 36/186 (19%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
R ++ E + RIL + GAVIGKGG I+ ++++ A +S V S+
Sbjct: 16 RNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVS--------------VDDSQ 61
Query: 240 GPES--RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
GPE + S + + + + +++ E+ ++ + RL++ + GC++GKGG
Sbjct: 62 GPERTIQISTDIDSTLEIITEMLKYFEERDEEY--------DVRLLIHQSLAGCVIGKGG 113
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISE-----NDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I E+R G + LK S DRVVQ G+ S+V +AV V RD
Sbjct: 114 QKIKEIRDRIGC-------RFLKVFSNVAPQSTDRVVQTVGKQSQVIEAVREVITLTRDT 166
Query: 353 HFSGTL 358
G +
Sbjct: 167 PIKGPI 172
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEG 240
+Q+ VS + VGA+IGK G I+ L AGA I + A P+ ER++ +T
Sbjct: 419 EQETVS--LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP-- 474
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
PE+++ KA +F +L E F+ + + + A + V S+ G ++GKGG +
Sbjct: 475 PEAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTV 525
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+E++ +T + + DQ EN+ V V+I G F
Sbjct: 526 NELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 558
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V FR+LCS ++ A++GKGG I ++ + A ++V + ER+ITV GP
Sbjct: 80 VHFRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITV---RGPAEYV 136
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ KA L+ +++ + S + +N +L+ +G ++GK G E+
Sbjct: 137 A---KAFGLITRAIMDEPFNQASTVESKQ---INLKLLFPHTIIGYIIGKRGARFREIED 190
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+ +++ SDQ+L + DR++ I+G + A Y V
Sbjct: 191 NSAAALK-ASDQILP--ASTDRILHITGVADAIHIATYYV 227
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVT 236
+ A++ Q++++ I +G VIGKGG ++ +++ G ++ V +P ER +T+
Sbjct: 314 MQAQSGQEKINQDIYVPQMHIGLVIGKGGKNLKDIRTITGCYVKVNDEVPGATERKLTLM 373
Query: 237 ASEGPESRYSP--AQKAVVLVFSRL 259
++ SP Q+A++L+ +++
Sbjct: 374 ST-------SPFAIQQAIMLINNKI 391
>gi|426219907|ref|XP_004004159.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Ovis aries]
Length = 439
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 119
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 120 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPQSTDRVVL 170
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 171 IGGKPDRVVECI 182
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASE 239
++ R L SN G+VIGKGG+ I QS++GA I + P +R+I ++ +
Sbjct: 31 EKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGAT 90
Query: 240 GPESRYSPAQKAVVLVFSRLI-EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ KA+ L+ ++L+ E +E G + RL+V ++ G ++GKGG+
Sbjct: 91 ------NEIIKAMELILAKLLSEMHTEDGDEADPRS----KVRLIVPNSSCGGIIGKGGS 140
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RDNHFSGT 357
I + + SI+ IS Q + DR+V + G + A+ + +L D H++
Sbjct: 141 TIKSFIEDSQASIK-ISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHYTQF 199
Query: 358 LN 359
+N
Sbjct: 200 MN 201
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVL 254
+VG++IGK G ++ ++ E+GA I++ ER++T+T A +A+
Sbjct: 6 QEVGSIIGKKGETVKKIREESGARINISEG--SSPERIVTITG----------ATEAIFR 53
Query: 255 VFSRLIEGTSEKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
F+ + + E SN + V RLV +Q G L+GKGG+ I E+R+ TG
Sbjct: 54 TFAMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQ 113
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+++ D L +R V ISG + V ++
Sbjct: 114 VQVAGDMLP---DSTERAVTISGTPQAITQCVRHI 145
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS 238
T + V+ R++ + G++IGKGG+ I+ ++ GA + V G +P+ ER +T++ +
Sbjct: 76 TSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGT 134
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 302 QETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 361 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 409
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G+F V+ A
Sbjct: 410 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGQFYSVQSA 453
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 81 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 135
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ P++ R++E ++ L S+NKG + +++ +N +G ++GK
Sbjct: 136 YGN--PDN--------CTNACKRILEVMQQEAL--STNKGEIC-LKILAHNNLIGRIIGK 182
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 183 SGNTIKRIMQDTDTKITVSSINDINSYNL-ERIITVKGLIENMSRAENQISTKLRQSY 239
>gi|310792993|gb|EFQ28454.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 384
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D +++ R + S+ + G +IGK G + L+ E G V + +R++T+T
Sbjct: 39 DEEYAMAQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G +S +A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 99 --GCQS----VAEAYAIVAKALLEGAPSMGMGGVVQNNGTHPIKLLISHNQMGTIIGRQG 152
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN--HFS 355
I ++ V+G +R+++ + + S +R+V++ G +K A++ + L D+ +
Sbjct: 153 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIKGAIWEICKCLVDDWQRGT 209
Query: 356 GTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWS 409
GT+ T T T+ + +S G SS D+S P + + GN +
Sbjct: 210 GTVLYNPVVRTQPGTTSTAGSGSTPNYSSGGGRSS-----DYSAPRVMRTGNGA 258
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
TQ ++S R L +IGK G I ++ ++ A +++ +P ER++TV+ G
Sbjct: 542 TQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVS---G 598
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTI 299
P AV F ++ +++ D +S G V R +V ++++G ++GK G+
Sbjct: 599 P-------LDAVSKAFGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSK 651
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLN 359
I E+++ +G R+ + + + +RV+ ISG V AVY V L ++ N
Sbjct: 652 IKEIQEASGA--RLTAGEAM-LPGSTERVLSISGVADAVHIAVYYVGSILLEHPDRNANN 708
Query: 360 -----TARTRSTSSVLTETSPYSRLKDPASF 385
TA ST + +PY+ + P +
Sbjct: 709 LPYRPTAGGPSTRAGAAGANPYAAPQQPFGY 739
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKV 338
++ + ++ VGC++GKGG+ I+E+R ++ + I+I+ + S N+R+V I+G +
Sbjct: 767 QIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNI 826
Query: 339 KDAVYNVTGRL 349
+ AV + RL
Sbjct: 827 QMAVSLLYQRL 837
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 145 QRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKG 204
+ N ++AP S +S P S+ A+ + +S +I +VG +IGKG
Sbjct: 100 ESNKGFSSAPPDMKSTISNSAPSSIP----ASYGSYPGGSGLSKKIDVPQGRVGVIIGKG 155
Query: 205 GTIIRALQSEAGAFISVGATM---PECDERLITVTASEGPESRYSPAQKAVVLVFSRLIE 261
G I+ LQ ++GA I V M P R++ + + PE + + A++ + V +
Sbjct: 156 GETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGT--PE-QIAKAEQLINDVLAEADA 212
Query: 262 GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKC 321
G S + +G + + + +N+VG ++GKGG I M+ +G I++I L
Sbjct: 213 GGSGTISRRYAGQGGSEHFSMKIPNNKVGLVIGKGGDSIKNMQARSGARIQVIPLHLPPG 272
Query: 322 ISENDRVVQISGEFSKVKDA 341
+ +R V I G +V+ A
Sbjct: 273 DTSTERTVHIEGTSEQVEAA 292
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 296 QETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 354
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 355 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 403
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 404 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 447
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 75 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 129
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ L S+NKG + +++ +N +G ++GK
Sbjct: 130 YGN--PENCTNACK--------RILEVMQQEAL--STNKGEIC-LKILAHNNLIGRIIGK 176
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 177 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 233
>gi|62088704|dbj|BAD92799.1| heterogeneous nuclear ribonucleoprotein K isoform a variant [Homo
sapiens]
Length = 442
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 11 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 70
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 71 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 121
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 122 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVL 172
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 173 IGGKPDRVVECI 184
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 363 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 418
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 419 QDQIQNAQY 427
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 419
>gi|354500004|ref|XP_003512093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 4
[Cricetulus griseus]
Length = 439
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 119
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 120 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVL 170
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 171 IGGKPDRVVECI 182
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 33/252 (13%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL + + AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDVENGATKRSHYGTGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T S A++ V ++
Sbjct: 63 GGETIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGS----------VDAIMAVMDFIM 112
Query: 261 EGTSEK-------GLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
E EK +DF S K +++V ++ G ++GK G I ++++ +G+
Sbjct: 113 EKIREKPDLTTKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSY 172
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT-LNTARTRSTSSV 369
++I Q K +S +R + + GE ++A+ + ++ D+ SGT LN + + V
Sbjct: 173 VQI--SQKAKDVSLQERCITVIGEKENNRNALLMILAKVADDPQSGTCLNVSYADVSGPV 230
Query: 370 LTET---SPYSR 378
SPY++
Sbjct: 231 ANYNPTGSPYAQ 242
>gi|328851244|gb|EGG00400.1| hypothetical protein MELLADRAFT_39696 [Melampsora larici-populina
98AG31]
Length = 420
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
T Q + R L +IGKGG I ++ ++GA ++ +P ER+++V G
Sbjct: 85 TATQTIQMRALIVTQDASIIIGKGGRHINEIREKSGARATISEAVPGNAERILSVG---G 141
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTI 299
P S KA L+ R+ +++ D S G V R VV ++++G ++GK G+
Sbjct: 142 PLDAVS---KAFGLIVRRI----NDEPFDVPSVPGSRAVTIRFVVPNSRMGSVIGKAGSK 194
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLN 359
I E++ ++G ++ S+ +L +E RV+ +SG V AVY V L +N N
Sbjct: 195 IKEIQDMSGARVQ-ASEAMLPGSTE--RVLSVSGVADAVHIAVYYVGMILVENQDRMPAN 251
Query: 360 T 360
T
Sbjct: 252 T 252
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVK 339
++ + + VG ++GKGG I+E+R+ + T I+I+ + + S N+R+V I+G+ +++
Sbjct: 344 QIYIPNELVGAVIGKGGQKINEIRQASATHIKIMEPGEGGQAASTNERLVTITGQPLQIQ 403
Query: 340 DAVYNVTGRL 349
AV + RL
Sbjct: 404 MAVQLLYQRL 413
>gi|168277712|dbj|BAG10834.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|184186906|gb|ACC69193.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
Length = 440
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 119
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 120 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVL 170
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 171 IGGKPDRVVECI 182
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 203 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 259
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 260 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 310
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 311 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 342
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 93 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 150
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 151 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 206
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 207 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 263
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 264 KAQGRIFGKLKEENF 278
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 39 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 98
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 99 GCDAISR------AYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQG 152
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 153 LKIKHIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGT 209
>gi|354500002|ref|XP_003512092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Cricetulus griseus]
Length = 440
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 119
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 120 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVL 170
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 171 IGGKPDRVVECI 182
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|332236655|ref|XP_003267515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Nomascus leucogenys]
gi|332832094|ref|XP_001154460.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 8 [Pan
troglodytes]
gi|338719652|ref|XP_003364039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475607|ref|XP_003809225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5 [Pan
paniscus]
gi|402897763|ref|XP_003911914.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Papio anubis]
gi|410978219|ref|XP_003995493.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Felis catus]
gi|426362137|ref|XP_004048237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Gorilla gorilla gorilla]
gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus]
gi|26353476|dbj|BAC40368.1| unnamed protein product [Mus musculus]
gi|194374597|dbj|BAG62413.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 119
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 120 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVL 170
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 171 IGGKPDRVVECI 182
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 404 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 460
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 461 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 511
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 512 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 543
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 26/250 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 44 QAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAI 103
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SR A +V L+EG G+ +L+++ NQ+G ++G+ G I
Sbjct: 104 SR------AYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKH 157
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTAR 362
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+
Sbjct: 158 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAIWEICKCLVDDW--------- 205
Query: 363 TRSTSSVL----TETSPYSRLKDPASFGVHSSVAVSHDFSQPPLTQDGNWSS-SEGQLRC 417
R T +VL T P S G + S P + + GN + S G R
Sbjct: 206 QRGTGTVLYNPVVRTQPSSGGNTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSNGSSRP 265
Query: 418 WKRLESRSES 427
+ R RS+S
Sbjct: 266 YNR---RSDS 272
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 42 DEEYSQTTLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITG 101
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
KA V L+EG G+ + +L+++ NQ+G ++G+ G
Sbjct: 102 G------CDAVSKAYAAVARSLLEGAPSVGMGGVISANGTHPLKLLISHNQMGTVIGRQG 155
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +RVV++ G ++ AV+ + L D+ GT
Sbjct: 156 LKIKHIQDVSG--VRMVAQKEMLPQS-TERVVEVQGTPEGIERAVWEICKCLVDDWQRGT 212
>gi|327274617|ref|XP_003222073.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Anolis carolinensis]
Length = 584
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A PE R++ +T PE+++ KA +
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPEAKLRMVIITGP--PEAQF----KAQGRI 474
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 475 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 530 DQ---TPDENDQVVVKITGHF 547
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q EV R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 194 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 248
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 249 ST--PEG-CSSACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 296
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 297 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIETCAKAEEEIMKKIRESY 352
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+ RP + A +R + V R+L + GAVIGKGG I+AL+++ A +SV
Sbjct: 20 NGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSV 79
Query: 222 -GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
++ P ER+++V AS + ++ + L E G+DF
Sbjct: 80 PDSSGP---ERILSVNAS------IDTIGEILLKIIPTLEEYQHYSGIDFD------CEL 124
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
RL++ + G ++G G I E+R+ T T+I++ + C DRVV + G+ +V +
Sbjct: 125 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVLVGGKPERVVE 181
Query: 341 AV 342
+
Sbjct: 182 CI 183
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+S G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 346 YSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 401
Query: 330 QISGEFSKVKDAVYNVTGRLRDNHFSGTL 358
I+G ++++A Y + +R +SG
Sbjct: 402 TITGTQDQIQNAQYLLQNSVR--QYSGRF 428
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 407
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 412 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 468
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 469 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 519
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 520 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 551
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 23/168 (13%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTAS 238
R+ + R+L ++ GAVIGKGG I+ L+S+ A +++ ++ PE R++ ++ +
Sbjct: 276 RSGHEGPELRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDSSTPE---RVLNISCA 332
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
+ V + RL +G S R++V +Q G ++G+ G
Sbjct: 333 N-----VATLTDCVSDLIPRLDDGKSGPQE---------AEVRMLVHQSQAGAIIGRAGF 378
Query: 299 IISEMRKVTGTSIRIISDQLLKCIS-ENDRVVQISGEFSKVKDAVYNV 345
I E+R +TG IR+ S+ C +RV+Q SG+ K+ +A+ +V
Sbjct: 379 KIKELRDITGAGIRVYSE----CAPLSTERVIQFSGDKEKIVNAIRHV 422
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 198 GAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTAS 238
G +IGKGG I ++ E+GA I V P+ DER+IT++ +
Sbjct: 522 GTIIGKGGERINRIREESGAQIVVDPPTPDSDERIITISGT 562
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 296 QETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 354
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 355 --PEGQW----KAQFMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 403
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 404 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 447
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 75 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 129
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ L S+NKG + +++ +N +G ++GK
Sbjct: 130 YGN--PENCTNACK--------RILEVMQQEAL--STNKGEIC-LKILAHNNLIGRIIGK 176
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 177 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 233
>gi|74225344|dbj|BAE31602.1| unnamed protein product [Mus musculus]
Length = 459
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGERPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISVGATMPECD--ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLD 269
+++ A +SV P+ ER+++++A + + + L E KG D
Sbjct: 69 RTDYNASVSV----PDSSGPERILSISAD------IETIGEILKKIIPTLEEYQHYKGSD 118
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
F RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 119 FD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVV 169
Query: 330 QISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 170 LIGGKPDRVVECI 182
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|74198765|dbj|BAE30613.1| unnamed protein product [Mus musculus]
Length = 450
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGERPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDF 270
+++ A +SV ++ P ER+++++A + + + L E KG DF
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDF 119
Query: 271 SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQ 330
RL++ + G ++G G I E+R+ T T+I++ + C DRVV
Sbjct: 120 D------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVL 170
Query: 331 ISGEFSKVKDAV 342
I G+ +V + +
Sbjct: 171 IGGKPDRVVECI 182
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 275 GLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGE 334
G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++ I+G
Sbjct: 361 GPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRIITITGT 416
Query: 335 FSKVKDAVY 343
++++A Y
Sbjct: 417 QDQIQNAQY 425
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 364 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + VGA+IGK G I+ L AGA I + A P+ +R++ +T P
Sbjct: 369 EQEV-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVIITGP--P 425
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 426 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 476
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 477 ELQNLTSAEVIVPRDQ---TPDENEEVIVRIIGHF 508
>gi|209148569|gb|ACI32944.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 443
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + + +R + V RIL + GAVIGKGG I++L+++ A +S
Sbjct: 19 TNGKRPAEDADEEQSYKRSRNTEDMVELRILLQSKNAGAVIGKGGKNIKSLRTDFNASVS 78
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V ++ P ER++++ A ++ + L E G+DF
Sbjct: 79 VPDSSGP---ERILSIGA------EIETVGDILLKIIPTLEEYQQYNGMDFD------CE 123
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
RL++ + G ++G G I E+R+ T T+I++ + C DRVV +SG+ +V
Sbjct: 124 LRLLIHQSLAGSIIGVKGAKIKELRENTQTNIKLFQE---CCPQSTDRVVLVSGKSERVV 180
Query: 340 DAV 342
+ +
Sbjct: 181 ECI 183
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
++ G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 360 YNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 415
Query: 330 QISGEFSKVKDAVY 343
ISG ++++A Y
Sbjct: 416 TISGTQDQIQNAQY 429
>gi|15237716|ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30 [Arabidopsis thaliana]
gi|7406447|emb|CAB85549.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21554568|gb|AAM63617.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23507775|gb|AAN38691.1| At5g04430/T32M21_30 [Arabidopsis thaliana]
gi|332003361|gb|AED90744.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 313
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLIT 234
+A + ++ R L SN G+VIGKGG+ I Q+++GA I + P +R+I
Sbjct: 27 EADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIM 86
Query: 235 VTASEGPESRYSPAQKAVVLVFSRL-IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
++ S + L+ +L E +E G + + + RLVV ++ G ++
Sbjct: 87 ISGS------IKEVVNGLELILDKLHSELHAEDGNEVEPRRRI----RLVVPNSSCGGII 136
Query: 294 GKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RD 351
GKGG I + + I+I D +S DR+V +SG F + A+ + +L D
Sbjct: 137 GKGGATIKSFIEESKAGIKISPLDNTFYGLS--DRLVTLSGTFEEQMRAIDLILAKLTED 194
Query: 352 NHFSGTLNTARTRSTSSVLTETSP------YSRLKDPASFGVHSSVAVSH 395
+H+S +++ + + +P Y K+ AS V VA H
Sbjct: 195 DHYSQNVHSPYSYAAGYNSVNYAPNGSGGKYQNHKEEASTTVTIGVADEH 244
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L ++G++IGK G ++ ++ ++ A I++ + C ER+ T+T S
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITI--SEGSCPERITTITGS------T 74
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+AV ++ +L E G S+ + V RLV+ ++Q G L+GK G I E+R+
Sbjct: 75 DAVFRAVSMIAFKLEEDLGAGGDGVSAGRAP-VTLRLVIPASQCGSLIGKAGAKIREIRE 133
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG +++ D L + +R V +SG
Sbjct: 134 STGAQVQVAGDLLP---NSTERAVTVSG 158
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 150 LTTAPSSSISYVSAVRPLS--LESDRVATLDARTQQQE-VSFRILCSNDKVGAVIGKGGT 206
+TT S+ + AV ++ LE D A D + + V+ R++ + G++IGK G
Sbjct: 67 ITTITGSTDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGA 126
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE 265
IR ++ GA + V G +P ER +TV+ V +I+ +
Sbjct: 127 KIREIRESTGAQVQVAGDLLPNSTERAVTVSG-----------------VPDTIIQCVRQ 169
Query: 266 KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
LD SS + +V ++ +GC++G+ G+ ISE+R+++G I+I + + +
Sbjct: 170 ICLDPSSQSS---SQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGN----QTEGSS 222
Query: 326 DRVVQISGEFSKVKDAVYNVT 346
+R V I+G + A Y +T
Sbjct: 223 ERHVTITGTPVSITLAQYLIT 243
>gi|400593892|gb|EJP61786.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 373
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 38 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 97
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 98 GCDAISR------AYAIVARALLEGAPAMGMGGILQGNGTHPIKLLISHNQMGTVIGRQG 151
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 152 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRALWEICKCLVDDWQRGT 208
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 19/163 (11%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA---TMPE--CDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR + +GA + + T P+ +ER +T+ S
Sbjct: 500 QETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGS 558
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE+++ KA L+F ++ E+G S+ + + ++V S+QVG ++GKGG
Sbjct: 559 --PEAQW----KAQYLIFEKM----REEGFVAGSDD-VRLTVEIMVPSSQVGRIIGKGGQ 607
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ + E++ V I G F V+ A
Sbjct: 608 NVRELQRVTGSVIKL--PEQGASPQEDETTVHIIGPFFSVQSA 648
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 25/183 (13%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDE 230
L +++Q + RIL +D VGA+IG+ G+ IR + + A + +VG+ E
Sbjct: 279 LPGQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSL-----E 333
Query: 231 RLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
+ IT+ + PE+ + A K ++ V + T NKG + +++ +N +G
Sbjct: 334 KAITIYGN--PEN-CTNACKRILEVMQQEANNT---------NKGEIC-LKILAHNNLIG 380
Query: 291 CLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
++GKGG I + + T T I + S + + +R++ + G + A ++ +LR
Sbjct: 381 RIIGKGGNTIKRIMQETDTKITVSSINDINSFNL-ERIITVKGAIDNMSRAEAQISAKLR 439
Query: 351 DNH 353
++
Sbjct: 440 QSY 442
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 95/194 (48%), Gaps = 19/194 (9%)
Query: 168 SLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE 227
L +D + Q +++ R + ++ + G +IGK G + L+ + G V +P
Sbjct: 23 GLSTDERPRTEEEYAQSQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPG 82
Query: 228 CDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA-----RL 282
+R++TVT + + A LV L++G + G+ G++ N RL
Sbjct: 83 VHDRVLTVTGA------LTGISDAYGLVADSLVKGVPQMGMG-----GVVGNPNTHPIRL 131
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
+++ NQ+G ++G+ G I +++ +G +R+++ + + S +R+V++ G V+ AV
Sbjct: 132 LISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGVQKAV 188
Query: 343 YNVTGRLRDNHFSG 356
+ + L D+ G
Sbjct: 189 WEIGKCLIDDEQRG 202
>gi|307175339|gb|EFN65358.1| Poly(rC)-binding protein 3 [Camponotus floridanus]
Length = 547
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 20/148 (13%)
Query: 206 TIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE 265
TI +Q ++GA I++ C ER++TVT GP + KA L+ + E S+
Sbjct: 19 TIRLIMQGKSGAKINISDG--SCPERIVTVT---GPTNSIF---KAFTLICKKFEEWCSQ 70
Query: 266 KGLDFSSNKGLL--------VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQ 317
D + RL+V ++Q G L+GKGG+ I E+R+VTG SI++ S+
Sbjct: 71 F-HDMQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEM 129
Query: 318 LLKCISENDRVVQISGEFSKVKDAVYNV 345
L + +R V ISG + +Y++
Sbjct: 130 L---PNSTERAVTISGTSEAITQCIYHI 154
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ V + +GC++GKGGT I+E+R+++G IR IS+ + DR + I+G V A
Sbjct: 356 MTVPNELIGCIIGKGGTKIAEIRQISGAMIR-ISNCEEREGGATDRTITITGNPDAVALA 414
Query: 342 VY 343
Y
Sbjct: 415 QY 416
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 25/147 (17%)
Query: 198 GAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPESRYSPAQKAVVLV 255
G +IGKGG I+ ++ E SV +P+ + ER++ + G +V+ +
Sbjct: 3 GVIIGKGGENIQRIREE----YSVKVMIPDSNGPERVLVLDGDLG----------SVLEI 48
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
F +E +N+ V+ RL+V +Q GC++G+GG I E+R+ +G ++ +
Sbjct: 49 FVENLE-------RMQNNRDEGVDLRLLVHQSQAGCIIGRGGYKIKELREQSG--LQTLK 99
Query: 316 DQLLKCISENDRVVQISGEFSKVKDAV 342
+ C DRV+Q+ G+ KV D +
Sbjct: 100 VYQMLCPGSTDRVIQLVGDLDKVVDCL 126
>gi|223649086|gb|ACN11301.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 440
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 19/165 (11%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTA 237
+R V RIL + GAVIGKGG I++L+++ A +SV ++ P ER+++++A
Sbjct: 37 SRNTDDMVELRILLQSKNAGAVIGKGGKNIKSLRTDFNASVSVPDSSGP---ERILSISA 93
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ ++ + L E G+DF RL++ + G ++G G
Sbjct: 94 ------EIETVGEILLKIIPTLEEYQQYNGMDFD------CELRLLIHQSLAGSIIGVKG 141
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
I E+R+ T TSI++ + C DRVV + G+ +V + +
Sbjct: 142 AKIKELRENTQTSIKLFQE---CCPQSTDRVVLVGGKSERVVECI 183
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
++ G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 357 YNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 412
Query: 330 QISGEFSKVKDAVY 343
ISG ++++A Y
Sbjct: 413 TISGTQDQIQNAQY 426
>gi|299029|gb|AAB26047.1| pre-mRNA binding K protein, hnRNP K [Xenopus laevis, Peptide, 396
aa]
Length = 396
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 25/181 (13%)
Query: 165 RPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GA 223
RP D A +R V RIL + GAVIGKGG I+AL+++ A +SV +
Sbjct: 19 RPAEDMEDEQAFKRSRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS 78
Query: 224 TMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE--KGLDFSSNKGLLVNAR 281
+ P ER+++++A + + + ++I E KG DF R
Sbjct: 79 SGP---ERILSISAD----------IETIGEILKKIIPTLEEHFKGNDFD------CELR 119
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L++ + G ++G G I E+R+ T T+I++ + C DRVV I G +V +
Sbjct: 120 LLIHQSLAGGIIGVKGAKIKELREKTQTTIKLFQEC---CPHSTDRVVLIGGRPDRVVEC 176
Query: 342 V 342
+
Sbjct: 177 I 177
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + D+R+IT+T ++
Sbjct: 318 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQ 371
>gi|358252903|dbj|GAA50475.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 859
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 26/191 (13%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
R+L S +VG++IGK G ++ + E+GA I++ ER++T+T +
Sbjct: 203 RLLMSGKEVGSIIGKRGENVKKYREESGARINISDG--SSPERIVTITGTT--------- 251
Query: 249 QKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTG 308
+ + + F+ + + + DF+ +GLL R+ + Q G ++GKGG+ I E+R++TG
Sbjct: 252 -EQISVAFTLMSQKFED---DFT--QGLL---RM---ATQCGSIIGKGGSRIKEVRELTG 299
Query: 309 TSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSS 368
SI++ S+ L + +R V ISG + V ++ D+ G + R + +
Sbjct: 300 ASIQVASEAL---PASTERTVTISGAAKAISKCVRHLCDIFVDSPAKGPVIPYRPKPAFT 356
Query: 369 VLTETSPYSRL 379
T P S
Sbjct: 357 SQNMTCPGSPF 367
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
R L S+ + G VIG+ G + ++ +A V +P ER++TVT + S
Sbjct: 145 MRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTG------QISG 198
Query: 248 AQKAVVLVFSRLIEGTSEKGLD----FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+A L+ +++ +S D ++ G + RL+++S Q+G ++GK GT I +
Sbjct: 199 VARAFGLICQTIMDNSSGIPNDSPSTYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSI 258
Query: 304 RKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
++ +GT + S +LL +E R+V+ISG +V+ AV + L
Sbjct: 259 QQTSGTRM-AASKELLPQSTE--RLVEISGRPEQVEKAVAEIAKAL 301
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 161 VSAVRPLSLESDRVAT-------------LDARTQQQEVSF----RILCSNDKVGAVIGK 203
V+ PLS + R + L + QQ S+ +I N +VG +IGK
Sbjct: 44 VTGAPPLSYDPKRTKSDNGAPHSGFDSYDLKPQYSQQGGSYGSSKKIEIPNGRVGVLIGK 103
Query: 204 GGTIIRALQSEAGAFISVGATM---PECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I+ LQ ++GA I V M P R++ + + P++ S A+K + V +
Sbjct: 104 GGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGT--PDA-VSSAEKLINEVLAEAE 160
Query: 261 EGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLK 320
G S G + + + +N+VG ++GKGG I M+ TG I++I
Sbjct: 161 AGASGGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPLHPPP 220
Query: 321 CISENDRVVQISGEFSKVKDAVYNV----TG--RLRDNHFSG 356
+ +R ++I G +++ A V TG RLR++ SG
Sbjct: 221 GDTSTERTLKIDGTPDQIESAKQLVNQILTGENRLRNSGNSG 262
>gi|258566349|ref|XP_002583919.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
gi|237907620|gb|EEP82021.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
Length = 366
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT GP
Sbjct: 45 QSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVT---GP- 100
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN-----ARLVVASNQVGCLLGKGG 297
KA +V L+EG + G+ G++ N RL+++ NQ+G ++G+ G
Sbjct: 101 --LQGTAKAYGMVAKSLLEGAPQVGMG-----GIIQNNGTHPVRLLISHNQMGTIIGRQG 153
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 154 LKIKYIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRGT 210
>gi|358398587|gb|EHK47938.1| hypothetical protein TRIATDRAFT_47313 [Trichoderma atroviride IMI
206040]
Length = 369
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 38 DEEYAQAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 97
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 98 GCDAISR------AYAIVARALLEGAPAVGMGGIVQGNGTHPIKLLISHNQMGTIIGRQG 151
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +RVV++ G ++ A++ ++ L D+ GT
Sbjct: 152 LKIKHIQDTSG--VRMVAQKEMLPQS-TERVVEVQGTPEGIQRAIWEISKCLVDDWQRGT 208
>gi|209151855|gb|ACI33086.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 433
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+ RP + A +R + V R+L + GAVIGKGG I+AL+++ A +SV
Sbjct: 20 NGKRPAEDMEEEQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSV 79
Query: 222 -GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
++ P ER+++V+A + ++ + L E G+DF
Sbjct: 80 PDSSGP---ERILSVSAD------IDTIGEILLKIIPTLEEYQHYNGIDFD------CEL 124
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
RL++ + G ++G G I E+R+ T T+I++ + C DRVV + G+ +V +
Sbjct: 125 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPQSTDRVVLVGGKPDRVVE 181
Query: 341 AV 342
+
Sbjct: 182 CI 183
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+S G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 350 YSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 405
Query: 330 QISGEFSKVKDAVY 343
I+G ++++A Y
Sbjct: 406 TINGTQDQIQNAQY 419
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 34/253 (13%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 195 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 254
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 255 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 302
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 303 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 360
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTETSPYSRLKDPAS 384
+RVV +SGE +V AV + +++ D S LN + V S P
Sbjct: 361 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPXX 420
Query: 385 FGVHSSVAVSHDF 397
+AV +
Sbjct: 421 XXXXXXIAVPENL 433
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 25/181 (13%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE---CDERLITVTASEGPESRY 245
+++ N G +IGKGG ++A+ ++GA++ + + PE ER++TV+ PE +
Sbjct: 318 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQKPEGINLQERVVTVSGE--PEQVH 374
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR-----------------LVVASNQ 288
A A+V + +S + +++ G + N+ + V N
Sbjct: 375 K-AVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPXXXXXXXXIAVPENL 433
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
VG +LGKGG + E +++TG I+I + N RV I+G + + A Y ++ R
Sbjct: 434 VGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQAAQYLISQR 492
Query: 349 L 349
+
Sbjct: 493 V 493
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 429 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 482
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 483 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 537
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 538 DQ---TPDENDQVVVKITGHF 555
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q EV R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 202 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 256
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 257 ST--PEG-CSAACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 304
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A V ++R+++
Sbjct: 305 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIETCAKAEEEVMKKIRESY 360
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 430 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 483
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 484 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 538
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 539 DQ---TPDENDQVVVKITGHF 556
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q EV R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 203 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 257
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 258 ST--PEG-CSAACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 305
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 306 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIEACAKAEEEIMKKIRESY 361
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPE 242
Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 44 QAQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAI 103
Query: 243 SRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISE 302
SR A +V L+EG G+ +L+++ NQ+G ++G+ G I
Sbjct: 104 SR------AYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKH 157
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ GT
Sbjct: 158 IQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGT 209
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD-ERLITVTASEGPESR 244
V+ R+L ++VG +IG+ G+ I ++ E+G + + E D ER+++V+ S +R
Sbjct: 23 VTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGN--EKDIERIVSVSGSPAGVTR 80
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
+ +E GL + K + V ++V + Q G ++GKGG I E+R
Sbjct: 81 -------AIGKVGEFVEADLNDGLTGRTTK-IPVTLHMIVPTGQCGSIIGKGGFRIKEIR 132
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
+ TG +++ I+++LL +E +++ + GE ++ V
Sbjct: 133 EKTGCNVK-IANELLPASTE--KLITLYGEPRVIQQCV 167
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
+ V RL+ NQVG L+G+ G+ I ++R+ +G ++I ++ + +R+V +SG
Sbjct: 21 ICVTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNE-----KDIERIVSVSGSP 75
Query: 336 SKVKDAVYNV 345
+ V A+ V
Sbjct: 76 AGVTRAIGKV 85
>gi|119585581|gb|EAW65177.1| poly(rC) binding protein 4, isoform CRA_f [Homo sapiens]
Length = 244
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 15/157 (9%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L +VG++IGK G ++ ++ ++ A I++ + C ER+ T+T S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI--SEGSCPERITTITGST------ 69
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ AV ++ +L E + + V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 70 AAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
TG +++ D L + +R V +SG V DA+
Sbjct: 130 TTGAQVQVAGDLL---PNSTERAVTVSG----VPDAI 159
>gi|166796167|gb|AAI59042.1| igf2bp3 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 395 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 448
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 449 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 503
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 504 DQ---TPDENDQVVVKITGHF 521
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q EV R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 168 QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 222
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 223 ST--PEG-CSAACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 270
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 271 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIEACAKAEEEIMKKIRESY 326
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
+S R L G +IGKGG + ++ + A +++ +P ER++TV GP
Sbjct: 79 ISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVV---GP---V 132
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISE 302
S KA LV ++IE E L NKG + V ++++ +N++G ++GK G++I
Sbjct: 133 SAVAKAYALVAEKIIE---ENTL-AEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRS 188
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRD--NHFSGTL 358
+++ +G +S Q +RVV I G ++ AV + L D NH +
Sbjct: 189 IQETSGAK---VSAQEEPLPLSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYM 243
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS 246
S +I N+ VG +IGKGG I ++ +G+ I + + ERLIT+T + PES
Sbjct: 350 SQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLITITGT--PESN-- 405
Query: 247 PAQKAVVLVFSRL 259
Q A+ L++SRL
Sbjct: 406 --QMALYLLYSRL 416
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 169 LESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPE 227
+E + +A + QQ+V+ +IL +++G++IGK G++IR++Q +GA +S +P
Sbjct: 147 IEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGAKVSAQEEPLPL 206
Query: 228 CDERLITV 235
ER++T+
Sbjct: 207 STERVVTI 214
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
++ + + VGC++GKGG I+E+R+ +G+ I+I ++R++ I+G +
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIAD----PSTDSHERLITITGTPESNQM 407
Query: 341 AVYNVTGRL 349
A+Y + RL
Sbjct: 408 ALYLLYSRL 416
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESR 244
+ R+L + GAVIGKGG I+ L++E A +++ + + ER++T+ A
Sbjct: 37 KYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDS--QTPERIVTIVAE------ 88
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
+ V + RL E + D + RL+V + G ++G+GG I E+R
Sbjct: 89 IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELR 148
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
+ T T +++ S C +RV+QI G K+ V + L++ G
Sbjct: 149 EETSTQLKVYSQ---CCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKG 197
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 295 QETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 353
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 354 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 402
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 403 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 446
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 74 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 128
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ + S+NKG + +++ +N +G ++GK
Sbjct: 129 YGN--PENCTNACK--------RILEVMQQEAI--STNKGEIC-LKILAHNNLIGRIIGK 175
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 176 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 232
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE +F + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 293 QETTF-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 351
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 352 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 400
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 401 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 444
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 84/167 (50%), Gaps = 25/167 (14%)
Query: 193 SNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITVTASEGPESRYS 246
+++ VGA+IG+ GT IR + ++ A + +VG+ E+ IT+ + PE+ +
Sbjct: 83 TSEMVGAIIGRQGTTIRTITQQSRARVDVHRKENVGSL-----EKSITIYGN--PENCTN 135
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
+ R++E ++ L S+NKG + +++ +N +G ++GK G I + +
Sbjct: 136 ACK--------RILEVMQQEAL--STNKGEIC-LKILAHNNLIGRIIGKSGNTIKRIMQD 184
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 185 TDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 230
>gi|133778726|gb|AAI34153.1| LOC557028 protein [Danio rerio]
Length = 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 127 EQEVVY-LFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVIITGP--P 183
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA ++ +L E F++ + + + A + V S G ++GKGG ++
Sbjct: 184 EAQF----KAQGRIYGKLKEENF-----FTAKEEVKLEAHIKVPSTAAGRVIGKGGKTVN 234
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ END V V+I G F
Sbjct: 235 ELQNLTSAEVIVPRDQ---TPDENDDVFVKIIGHF 266
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q++S R L +IG+GG + ++ ++ A ++V ++P ER++ V+ GP
Sbjct: 78 QQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVS---GP-- 132
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISE 302
AV F ++ +++ D S G V + ++ ++++G ++GKGG+ I E
Sbjct: 133 -----LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKE 187
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+++ +G + S+ +L +E RV+ +SG V AVY +
Sbjct: 188 IQEASGARLN-ASEAMLPGSTE--RVLSVSGVADAVHIAVYYI 227
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL +++ AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T S +A++ V ++
Sbjct: 63 GGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGS----------LEAIMAVMDFIM 112
Query: 261 EGTSEK-------GLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
+ EK +DF S K +++V ++ G ++GK G I ++++ G+
Sbjct: 113 DKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSY 172
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++I Q K +S +R + + GE ++A+ + ++ D+ SGT
Sbjct: 173 VQI--SQKAKDVSLQERCITVIGEKENNRNALMMILAKVADDPHSGT 217
>gi|406866101|gb|EKD19141.1| KH domain RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 372
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + +++ R + S+ + G +IGK G + L+ E GA V + +R++T+
Sbjct: 41 DEEYGESQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGAKAGVSKVVQGVHDRVLTIAG 100
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G E+ KA +V L+EG + G+ + +L+++ NQ+G ++G+ G
Sbjct: 101 --GCEA----ISKAYAIVARALLEGAPQMGMGGVVSTSGTHPIKLLISHNQMGTIIGRQG 154
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V+I G ++ A++ + L D+ GT
Sbjct: 155 LKIKHIQDASG--VRMVAQKEMLPQS-TERIVEIQGTPEGIQKAIWEICKCLIDDWQRGT 211
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q++S R L +IG+GG + ++ ++ A ++V ++P ER++ V+ GP
Sbjct: 78 QQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVS---GP-- 132
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISE 302
AV F ++ +++ D S G V + ++ ++++G ++GKGG+ I E
Sbjct: 133 -----LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKE 187
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+++ +G + S+ +L +E RV+ +SG V AVY +
Sbjct: 188 IQEASGARLN-ASEAMLPGSTE--RVLSVSGVADAVHIAVYYI 227
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESR 244
V+ + + N ++G+VIGKGG+ I+ +Q +GA ++ A +P ER+++V+
Sbjct: 163 VTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVA----- 217
Query: 245 YSPAQKAVVLVFSRLIE------GTSEKGLDFSSNKGL-----------LVNARLVVASN 287
AV + + L+E + S ++G + ++ + +
Sbjct: 218 -DAVHIAVYYIGTILLEYQDRYPANATGSYKQSQSRGPPANSNAPPPPGMQTQQIFIPNA 276
Query: 288 QVGCLLGKGGTIISEMRKVTGTSIRIISDQLL----KCISENDRVVQISGEFSKVKDAV 342
VG ++G+GG+ I+E+R + IR+ + +R+V I+G + AV
Sbjct: 277 LVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAV 335
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q++S R L +IG+GG + ++ ++ A ++V ++P ER++ V+ GP
Sbjct: 78 QQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVS---GP-- 132
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISE 302
AV F ++ +++ D S G V + ++ ++++G ++GKGG+ I E
Sbjct: 133 -----LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKE 187
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+++ +G + S+ +L +E RV+ +SG V AVY +
Sbjct: 188 IQEASGARLN-ASEAMLPGSTE--RVLSVSGVADAVHIAVYYI 227
>gi|71897277|ref|NP_001026556.1| heterogeneous nuclear ribonucleoprotein K [Gallus gallus]
gi|75571241|sp|Q5ZIQ3.1|HNRPK_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|53135051|emb|CAG32390.1| hypothetical protein RCJMB04_24e23 [Gallus gallus]
Length = 427
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +S
Sbjct: 15 TNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVS 74
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE----KGLDFSSNKG 275
V ++ P ER+++++A + + + ++I E KG DF
Sbjct: 75 VPDSSGP---ERILSISAD----------TETIGEILKKIIPTLEEYQHYKGSDFD---- 117
Query: 276 LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEF 335
RL++ + G ++G G I E+R+ T T+I++ + C DRVV I G+
Sbjct: 118 --CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVLIGGKP 172
Query: 336 SKVKDAV 342
+V + +
Sbjct: 173 DRVVECI 179
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 259 LIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
L EG S G D+S G ++ ++ + + G ++GKGG I ++R +G
Sbjct: 326 LFEGGS--GYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 383
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
SI+I D+ L+ DR++ I+G ++++A Y
Sbjct: 384 SIKI--DEPLE--GSEDRIITITGTQDQIQNAQY 413
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 405
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLIT 234
+A + ++ R L SN G+VIGKGG+ I Q+++GA I + P +R+I
Sbjct: 27 EADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIM 86
Query: 235 VTASEGPESRYSPAQKAVVLVFSRL-IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
++ S + L+ +L E +E G + + + RLVV ++ G ++
Sbjct: 87 ISGS------IKEVVNGLELILDKLHSELHAEDGNEVEPRRRI----RLVVPNSSCGGII 136
Query: 294 GKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RD 351
GKGG I + + I+I D +S DR+V +SG F + A+ + +L D
Sbjct: 137 GKGGATIKSFIEESKAGIKISPLDNTFYGLS--DRLVTLSGTFEEQMRAIDLILAKLTED 194
Query: 352 NHFS 355
+H+S
Sbjct: 195 DHYS 198
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL +++ AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T S +A++ V ++
Sbjct: 63 GGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGS----------LEAIMAVMDFIM 112
Query: 261 EGTSEK-------GLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
+ EK +DF S K +++V ++ G ++GK G I ++++ G+
Sbjct: 113 DKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSY 172
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++I Q K +S +R + + GE ++A+ + ++ D+ SGT
Sbjct: 173 VQI--SQKAKDVSLQERCITVIGEKENNRNALMMILAKVADDPHSGT 217
>gi|47085903|ref|NP_998309.1| far upstream element-binding protein 1 [Danio rerio]
gi|40555849|gb|AAH64649.1| Far upstream element (FUSE) binding protein 1 [Danio rerio]
Length = 642
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
VS + VG +IG+GG I LQ E+G I + +R +T+T S P++
Sbjct: 90 VSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGS--PDA-- 145
Query: 246 SPAQKAVVLVFSRLIEGTSEKG-----LDFSSNKGLLVNARLVVASNQVGCLLGKGGTII 300
++ RL+ EKG + G+ V+ ++ AS + G ++GKGG I
Sbjct: 146 -------IMTAKRLLSEIVEKGRPSPAFHHNDGPGMSVHEMMIPAS-KAGLVIGKGGETI 197
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
++++ G + +I D + D+ ++ISG+ KV+ A V +RD F
Sbjct: 198 KQLQERAGVKMVMIQDGPQNTGA--DKPLRISGDPFKVQQAKDMVMDLIRDQGF 249
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R L S G +IGKGG + L+ + G V +P +R++T++ S
Sbjct: 28 LTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLTISGS------V 81
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA L+ ++L+ + SS+ + RL+++ N +G ++G+GGT I ++
Sbjct: 82 DRVAKAYGLIVAQLVASNPTSPISASSS--THTSLRLLISHNLMGTIIGRGGTRIKAIQD 139
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+G + D L + +RVV++ G ++ AV ++
Sbjct: 140 NSGARMVASKDMLPQS---TERVVEVHGSVEAIERAVDDI 176
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL +++ AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T S +A++ V ++
Sbjct: 63 GGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGS----------LEAIMAVMDFIM 112
Query: 261 EGTSEK-------GLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
+ EK +DF S K +++V ++ G ++GK G I ++++ G+
Sbjct: 113 DKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSY 172
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++I Q K +S +R + + GE ++A+ + ++ D+ SGT
Sbjct: 173 VQI--SQKAKDVSLQERCITVIGEKENNRNALMMILAKVADDPHSGT 217
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 42 DEEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTITG 101
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 102 GCEAISR------AYAVVARALLEGAPTIGMGGVVQSNGTHPIKLLISHNQMGTIIGRQG 155
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN--HFS 355
I ++ V+G +R+++ + + S +R+V++ G ++ A++ + L D+ +
Sbjct: 156 LKIKHIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAIWEICKCLVDDWQRGA 212
Query: 356 GTL---NTARTRSTSSVLTETSPYSRLKDPASFG 386
GT+ RT+ + T + ++D A +G
Sbjct: 213 GTVLYNPVVRTQGAGAAPGVTGTTNFVQDRAPYG 246
>gi|357508127|ref|XP_003624352.1| KH domain-containing protein [Medicago truncatula]
gi|355499367|gb|AES80570.1| KH domain-containing protein [Medicago truncatula]
Length = 188
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQ 330
++VA+N +GCL+GKGG+II+EMR++T ++IRI+S + L K S++D +VQ
Sbjct: 34 VIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIASDDDEMVQ 83
>gi|413921493|gb|AFW61425.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 699
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 151 TTAPSSSISYVSAVRPLSLESDRVAT-LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIR 209
T AP++ S +PL ++ DA QE+S I N +VG +IGK G IR
Sbjct: 111 TAAPATDSQAGSDDKPLEAAAEAPQPESDAAAVAQEISRMIEVPNSRVGVLIGKAGETIR 170
Query: 210 ALQSEAGAFISVGATMPECDER-------LITVTASEGPESRYSPAQKAVVLVFSRLIEG 262
LQ +GA I + + D L+ S KA +L+ S + E
Sbjct: 171 NLQMSSGAKIQITKDA-DADSNALTRPVELVGTLGS---------VDKAELLIKSVIAE- 219
Query: 263 TSEKGL-------DFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+E G F S + + V N+VG ++GKGG I M+ +G I++I
Sbjct: 220 -AEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGKGGDAIKGMQTKSGARIQLIP 278
Query: 316 DQLLKCISENDRVVQISGEFSKVK 339
+ ++ +R+V+++G +++
Sbjct: 279 QHPPEGVTLTERIVRVTGNKKQIE 302
>gi|281341834|gb|EFB17418.1| hypothetical protein PANDA_012445 [Ailuropoda melanoleuca]
Length = 320
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 205 GTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTS 264
G ++ ++ E+GA I++ C ER+IT+ GP + KA ++ +L E S
Sbjct: 3 GESVKKMREESGARINISEG--NCPERIITLA---GPTNAIF---KAFAMIIDKLEEDIS 54
Query: 265 EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISE 324
+ ++ V RLVV ++Q G L+GKGG I E+R+V G +++ D L +
Sbjct: 55 SSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREV-GAQVQVAGDMLP---NS 110
Query: 325 NDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSP---YSRLKD 381
+R + I+G + + V + + ++ G R + +SS + YS D
Sbjct: 111 TERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 170
Query: 382 PASFG-VHSSVAVSHDFSQPPL 402
ASF S+ ++ D PPL
Sbjct: 171 SASFPHTTPSMCLNPDLEGPPL 192
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L A A I + A P+ ER++ +T P
Sbjct: 326 EQEVVY-LFIPTQAVGAIIGKKGHHIKQLARFARASIKIAPAEGPDVGERMVIITGP--P 382
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 383 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLKAHIRVPSSAAGRVIGKGGKTVN 433
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ EN+ V V+I G F
Sbjct: 434 ELQNLTSAEVIVPRDQ---TPDENEEVIVKIIGHF 465
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL +++ AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T S +A++ V ++
Sbjct: 63 GGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGS----------LEAIMAVMDFIM 112
Query: 261 EGTSEK-------GLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
+ EK +DF S K +++V ++ G ++GK G I ++++ G+
Sbjct: 113 DKIREKPDLTLKTTVDFESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEECGSY 172
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
++I Q K +S +R + + GE ++A+ + ++ D+ SGT
Sbjct: 173 VQI--SQKAKDVSLQERCITVIGEKENNRNALMMILAKVADDPHSGT 217
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLIT 234
+A + ++ R L SN G+VIGKGG+ I Q+++GA I + P +R+I
Sbjct: 27 EADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIM 86
Query: 235 VTASEGPESRYSPAQKAVVLVFSRL-IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
++ S + L+ +L E +E G + + + RLVV ++ G ++
Sbjct: 87 ISGS------IKEVINGLELILDKLHSELHAEDGNEVEPRRRI----RLVVPNSSCGGII 136
Query: 294 GKGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL-RD 351
GKGG I + + I+I D +S DR+V +SG F + A+ + +L D
Sbjct: 137 GKGGATIKSFIEESKAGIKISPLDNTFYGLS--DRLVTLSGTFEEQMRAIDLILAKLTED 194
Query: 352 NHFS 355
+H+S
Sbjct: 195 DHYS 198
>gi|449272169|gb|EMC82214.1| Heterogeneous nuclear ribonucleoprotein K [Columba livia]
Length = 422
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +SV
Sbjct: 16 NGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 75
Query: 222 -GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
++ P ER+++++A + + + L E KG DF
Sbjct: 76 PDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDFD------CEL 120
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
RL++ + G ++G G I E+R+ T T+I++ + C DRVV I G+ +V +
Sbjct: 121 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVLIGGKPDRVVE 177
Query: 341 AV 342
+
Sbjct: 178 CI 179
>gi|328716031|ref|XP_001944817.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 415
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 91/164 (55%), Gaps = 19/164 (11%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ RIL + + +IG+ G ++R L++++ A I++ T ER++TVT +
Sbjct: 21 LTIRILMGKE-ILPLIGEYGEVVRDLRNQSEATITI--TDSSTPERIVTVTGN------I 71
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFS----SNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
+ QKA L+ ++++E S L S SN + +L+V ++Q G L+GKGG I
Sbjct: 72 NIIQKAFALI-TKILEQNSPTHLQNSRKPSSNNSTTI--KLIVPASQCGSLIGKGGVKIR 128
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
E+R+ +G + + SD LL+ +E R V ISG + +A++ +
Sbjct: 129 EIREASGAMVNVASD-LLQNSTE--RTVSISGTAEAITEAIHQI 169
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 21/229 (9%)
Query: 165 RPLSLESDRVATLDART--QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG 222
RPL ++ +T + T + E+ ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPTEATSTKRSNTAGEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLS 70
Query: 223 AT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
+ P ER+ V S ES S + + +G ++ L +N
Sbjct: 71 KSKDFYPGTTERVCLVQGSA--ESLLS-VHNFIAEKVREVPQGGTKNDLGVLLPPQTTIN 127
Query: 280 A------RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
A +L+V + G ++GKGG + + + +G +++ Q + ++RVV +SG
Sbjct: 128 AERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQL--SQKPAGPNLHERVVTVSG 185
Query: 334 EFSKVKDAVYNVTGRLRDNHFSGT--LNTARTRSTSSVLTET---SPYS 377
E S+V+ A+ ++ + R++ GT LN + T S V SPY+
Sbjct: 186 EPSQVQKAIRSIIHKSREDPPQGTTHLNISYTNSQGPVANSNPTGSPYA 234
>gi|223947885|gb|ACN28026.1| unknown [Zea mays]
gi|224031081|gb|ACN34616.1| unknown [Zea mays]
gi|413921492|gb|AFW61424.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 706
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 151 TTAPSSSISYVSAVRPLSLESDRVAT-LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIR 209
T AP++ S +PL ++ DA QE+S I N +VG +IGK G IR
Sbjct: 118 TAAPATDSQAGSDDKPLEAAAEAPQPESDAAAVAQEISRMIEVPNSRVGVLIGKAGETIR 177
Query: 210 ALQSEAGAFISVGATMPECDER-------LITVTASEGPESRYSPAQKAVVLVFSRLIEG 262
LQ +GA I + + D L+ S KA +L+ S + E
Sbjct: 178 NLQMSSGAKIQITKDA-DADSNALTRPVELVGTLGS---------VDKAELLIKSVIAE- 226
Query: 263 TSEKGL-------DFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+E G F S + + V N+VG ++GKGG I M+ +G I++I
Sbjct: 227 -AEAGGSPALIARGFGSGQPGSEQFEMTVPDNKVGLIIGKGGDAIKGMQTKSGARIQLIP 285
Query: 316 DQLLKCISENDRVVQISGEFSKVK 339
+ ++ +R+V+++G +++
Sbjct: 286 QHPPEGVTLTERIVRVTGNKKQIE 309
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 171 SDRVATLDA----RTQ----QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG 222
+D++ L+ RT+ Q +++ R + ++ + G +IGK G + L+ + G V
Sbjct: 19 ADKIGALNTDDHPRTEEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVS 78
Query: 223 ATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA-- 280
+P +R++TVT + + A LV L++G + G+ G++ N
Sbjct: 79 KVVPGVHDRVLTVTGA------LTGIADAYGLVADSLVKGAPQMGM-----GGVVGNPNT 127
Query: 281 ---RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
RL+++ NQ+G ++G+ G I +++ +G +R+++ + + S +R+V++ G
Sbjct: 128 HPIRLLISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPDG 184
Query: 338 VKDAVYNVTGRLRDNHFSG 356
++ AV+ + L D+ G
Sbjct: 185 IQKAVWEIGKCLVDDEQRG 203
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 295 QETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 353
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 354 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 402
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 403 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 446
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 74 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 128
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ + S+NKG + +++ +N +G ++GK
Sbjct: 129 YGN--PENCTNACK--------RILEVMQQEAI--STNKGEIC-LKILAHNNLIGRIIGK 175
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 176 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 232
>gi|57530702|ref|NP_001006359.1| insulin-like growth factor 2 mRNA-binding protein 3 [Gallus gallus]
gi|82082638|sp|Q5ZLP8.1|IF2B3_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=VICKZ
family member 3
gi|53128909|emb|CAG31345.1| hypothetical protein RCJMB04_5e15 [Gallus gallus]
Length = 584
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 474
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 475 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 530 DQ---TPDENDQVVVKITGHF 547
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 34/246 (13%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 71 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 118
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 119 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 176
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTETSPYSRLKDPAS 384
+RVV +SGE +V AV + +++ D S LN + V S PA
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 236
Query: 385 FGVHSS 390
S+
Sbjct: 237 LAAESA 242
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 36/189 (19%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE---CDERLITVTASEGPESRY 245
+++ N G +IGKGG ++A+ ++GA++ + + PE ER++TV+ PE +
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQKPEGINLQERVVTVSGE--PEQVH 190
Query: 246 SPAQKAVVLVFSRLIE---GTSEKGLDFSSNKGLLVNAR--------------------- 281
KAV + ++ E +S + +++ G + N+
Sbjct: 191 ----KAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADLAAESAKELV 246
Query: 282 -LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
+ V N VG +LGKGG + E +++TG I+I + N RV I+G + +
Sbjct: 247 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVT-ITGSPAATQA 305
Query: 341 AVYNVTGRL 349
A Y ++ R+
Sbjct: 306 AQYLISQRV 314
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 35/236 (14%)
Query: 165 RPLSLESDRVATLDART--QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG 222
RPL ++ +T + T + E+ ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPTEATSTKRSNTAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLS 70
Query: 223 AT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNK-GLLV 278
+ P ER+ V S +A++ V + + E E N G+L+
Sbjct: 71 KSKDFYPGTTERVCLVQGSA----------EALLSVHNFIAEKVREVPQGAPKNDLGVLL 120
Query: 279 ------------NARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEND 326
A+L+V + G ++GKGG + + + +G +++ Q + ++
Sbjct: 121 PPQSTINAERAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQL--SQKPAGSNLHE 178
Query: 327 RVVQISGEFSKVKDAVYNVTGRLRDNHFSGT--LNTARTRSTSSVLTET---SPYS 377
RVV +SGE S+V+ A++++ + R++ GT LN + + V SPY+
Sbjct: 179 RVVTVSGEPSQVQKAIHSIIHKSREDPPQGTTHLNISYINTQGPVANSNPTGSPYA 234
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 309 QETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 367
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 368 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 416
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 417 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 460
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 30/184 (16%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 81 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 135
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL------VNARLVVASNQV 289
+ PE+ + + R++E ++ + S+NKG L + +++ +N +
Sbjct: 136 YGN--PENCTNACK--------RILEVMQQEAI--STNKGELSPECSEICLKILAHNNLI 183
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G ++GK G I + + T T I + S + + +R++ + G + A ++ +L
Sbjct: 184 GRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKL 242
Query: 350 RDNH 353
R ++
Sbjct: 243 RQSY 246
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D + +++ R + S+ + G +IGKGG + L+ E G V + +R++T++
Sbjct: 42 DEEYAESQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISG 101
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQVGCLLGKG 296
SR A +V L+EG + G+ SN G +L+++ NQ+G ++G+
Sbjct: 102 GCDSISR------AYSIVAKALLEGAPQMGMGGVVSNNGTHP-IKLLISHNQMGTIIGRQ 154
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
G I ++ +G +R+++ + + S +R+V++ G ++ A++ + L D+ G
Sbjct: 155 GLKIKHIQDASG--VRMVAQKEMLPQS-TERIVEVQGNPEGIQKAIWEICKCLVDDWARG 211
Query: 357 T 357
T
Sbjct: 212 T 212
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 360 QETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 418
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 419 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 467
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 468 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 511
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 30/184 (16%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 132 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 186
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL------VNARLVVASNQV 289
+ PE+ + + R++E ++ + S+NKG L + +++ +N +
Sbjct: 187 YGN--PENCTNACK--------RILEVMQQEAI--STNKGELSPECSEICLKILAHNNLI 234
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G ++GK G I + + T T I + S + + +R++ + G + A ++ +L
Sbjct: 235 GRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKL 293
Query: 350 RDNH 353
R ++
Sbjct: 294 RQSY 297
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRY 245
+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T PE+++
Sbjct: 360 TVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--PEAQF 417
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
KA +F +L E F+ + + + A + V S+ G ++GKGG ++E++
Sbjct: 418 ----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQN 468
Query: 306 VTGTSIRIISDQLLKCISENDRV-VQISGEF 335
+T + + DQ EN V V+I G F
Sbjct: 469 LTSAEVIVPRDQ---TPDENAEVIVRIIGHF 496
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 30/182 (16%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++T+Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 118 SQTRQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 172
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + E T E L ++ GL V
Sbjct: 173 VTIHAT--PEGT-SEACRMILEIMQKEAEDTKLAEEVPLKILAHNGL------------V 217
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 218 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTIDACANAEMEIMKKL 276
Query: 350 RD 351
R+
Sbjct: 277 RE 278
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 360 QETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 418
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 419 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 467
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 468 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 511
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 139 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 193
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ L S+NKG + +++ +N +G ++GK
Sbjct: 194 YGN--PENCTNACK--------RILEVMQQEAL--STNKGEIC-LKILAHNNLIGRIIGK 240
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 241 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 297
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 302 QETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 361 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 409
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 410 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 453
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 81 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 135
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ + S+NKG + +++ +N +G ++GK
Sbjct: 136 YGN--PENCTNACK--------RILEVMQQEAI--STNKGEIC-LKILAHNNLIGRIIGK 182
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 183 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 239
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 367 QETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 425
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 426 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 474
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 475 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 518
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 30/184 (16%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 139 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 193
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL------VNARLVVASNQV 289
+ PE+ + + R++E ++ + S+NKG L + +++ +N +
Sbjct: 194 YGN--PENCTNACK--------RILEVMQQEAI--STNKGELSPECSEICLKILAHNNLI 241
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G ++GK G I + + T T I + S + + +R++ + G + A ++ +L
Sbjct: 242 GRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKL 300
Query: 350 RDNH 353
R ++
Sbjct: 301 RQSY 304
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 309 QETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 367
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 368 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 416
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 417 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSA 460
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 30/184 (16%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 81 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 135
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLL------VNARLVVASNQV 289
+ PE+ + + R++E ++ + S+NKG L + +++ +N +
Sbjct: 136 YGN--PENCTNACK--------RILEVMQQEAI--STNKGELSPECSEICLKILAHNNLI 183
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G ++GK G I + + T T I + S + + +R++ + G + A ++ +L
Sbjct: 184 GRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKL 242
Query: 350 RDNH 353
R ++
Sbjct: 243 RQSY 246
>gi|449492580|ref|XP_002192437.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Taeniopygia guttata]
Length = 584
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 474
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 475 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 530 DQ---TPDENDQVVVKITGHF 547
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 177 LDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLI 233
L R ++ E ++L + G++IGKGG I LQ E GA I + + P ER+
Sbjct: 129 LQIRAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 188
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN-------------- 279
V + +A+ V S + E E + + K +VN
Sbjct: 189 LVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNILQPQTTMNPDRAK 236
Query: 280 -ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV 338
A+L+V ++ G ++GKGG + + + +G +++ Q + I+ +RVV +SGE +V
Sbjct: 237 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQV 294
Query: 339 KDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
AV + +++ D S LN + V SPY+ D
Sbjct: 295 HKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 341
>gi|363744460|ref|XP_003643054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Gallus gallus]
Length = 426
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +S
Sbjct: 15 TNGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVS 74
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V ++ P ER+++++A + + + L E KG DF
Sbjct: 75 VPDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDFD------CE 119
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
RL++ + G ++G G I E+R+ T T+I++ + C DRVV I G+ +V
Sbjct: 120 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVLIGGKPDRVV 176
Query: 340 DAV 342
+ +
Sbjct: 177 ECI 179
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 259 LIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
L EG S G D+S G ++ ++ + + G ++GKGG I ++R +G
Sbjct: 325 LFEGGS--GYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 382
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
SI+I D+ L+ DR++ I+G ++++A Y
Sbjct: 383 SIKI--DEPLE--GSEDRIITITGTQDQIQNAQY 412
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 351 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 404
>gi|449270977|gb|EMC81613.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Columba livia]
Length = 584
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 474
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 475 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 530 DQ---TPDENDQVVVKITGHF 547
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 340 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 393
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 394 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 448
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 449 DQ---TPDENDQVVVKITGHF 466
>gi|307204634|gb|EFN83256.1| Heterogeneous nuclear ribonucleoprotein K [Harpegnathos saltator]
Length = 139
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R +Q + R+L + G++IGKGG I L+S+ A I V P+C ER++T+++
Sbjct: 22 RYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV----PDCPGPERVLTISS 77
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
V+ V + ++ E G S++ ++ R++V +Q GC++GKGG
Sbjct: 78 D----------LPTVLQVLNEVVPNLEENGSRHGSDE---IDVRMLVHQSQAGCIIGKGG 124
Query: 298 TIISEMRKVT 307
I E+R+V+
Sbjct: 125 LKIKELREVS 134
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 16/239 (6%)
Query: 133 EILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILC 192
++ + D + NS PS +VS R SL++ L A Q+ ++
Sbjct: 32 QVAAKMGGDQMPNMNSSAVIDPSL-YGFVSQNR--SLDNGVGNHLGAMVHQRALTTEDFK 88
Query: 193 SNDK-VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKA 251
DK VG +IGKGG I +Q E+G I + + +R T+T S PE+ ++A
Sbjct: 89 VPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGS--PEN----IEQA 142
Query: 252 VVLVFSRLIEGTSEKGLDFSSN-KGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
L+ S +IE G F ++ G ++++ +N+VG ++GKGG I ++++ TG
Sbjct: 143 KRLL-SEIIE-QCRYGPGFHNDMDGNGSIQQMLIPANKVGLVIGKGGETIKQLQERTGVQ 200
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSV 369
+ +I D + + D+ ++I+G+ KV+ A V +RD G T R S +
Sbjct: 201 MMMIQDDPMPTGA--DKPLRITGDPLKVQQARELVVKLIRDKD-QGDFRTGRAEFGSKM 256
>gi|419779074|ref|ZP_14304955.1| gram positive anchor [Streptococcus oralis SK10]
gi|383186838|gb|EIC79303.1| gram positive anchor [Streptococcus oralis SK10]
Length = 367
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 13 ETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPH 72
ET KP+E ES +P E + T +PV+ + ET +P++ + ET + E V
Sbjct: 164 ETPTKPVEEVKPESPTKPAEDVKPVTPAKPVEDVKPETPAKPVEEVKPETPTKPAEEVKP 223
Query: 73 DTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQ 132
+T A+PVE V E + +E E +P+E PE+ + E + ET + +
Sbjct: 224 ETPAKPVEDVKPETPTKPVEEVKPETPAKPVEDVQPETPTKPVEDIKPETPAKPV----E 279
Query: 133 EILPDLHVDILSQRNSVLTTAPSSSISYVSAVRP 166
++ P+ + + P I V+ +P
Sbjct: 280 DVQPETPAKPVEDKKPETPAKPVEDIKPVTPTKP 313
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 4/155 (2%)
Query: 13 ETIHKPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPH 72
ET KP+E E+ +P E + ET +PV+ + ET +P++ + E+ + E V
Sbjct: 128 ETPAKPVEEVKPETSTKPAEDVKPETPAKPVEDVKPETPTKPVEEVKPESPTKPAEDVKP 187
Query: 73 DTIARPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQ 132
T A+PVE V E + +E E +P E PE+ + E + ET + +
Sbjct: 188 VTPAKPVEDVKPETPAKPVEEVKPETPTKPAEEVKPETPAKPVEDVKPETPTKPV----E 243
Query: 133 EILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPL 167
E+ P+ + T P I + +P+
Sbjct: 244 EVKPETPAKPVEDVQPETPTKPVEDIKPETPAKPV 278
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 17 KPLEVAFQESICRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDTIA 76
KP+E E+ +PVE + ET +P + + ET +P++ + ET + +E V ++
Sbjct: 120 KPVEEVKPETPAKPVEEVKPETSTKPAEDVKPETPAKPVEDVKPETPTKPVEEVKPESPT 179
Query: 77 RPVEAVPQEILWRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQE 133
+P E V + +E E +P+E PE+ + +E + ET + V E
Sbjct: 180 KPAEDVKPVTPAKPVEDVKPETPAKPVEEVKPETPTKPAEEVKPETPAKPVEDVKPE 236
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 28 CRPVETILHETIRRPVDTIPHETIHRPLDTISHETIRRSLEAVPHDTIARPVEAVPQEIL 87
+PVE + ET +PV+ + ET +P + + ET + +E V +T +PVE V E
Sbjct: 119 VKPVEEVKPETPAKPVEEVKPETSTKPAEDVKPETPAKPVEDVKPETPTKPVEEVKPESP 178
Query: 88 WRSLESGPQEILRRPLEVFAPESSHRSSEALSIETQHRLFGAVSQEILPDLHVDILSQRN 147
+ E +P+E PE+ + E + ET + ++E+ P+ +
Sbjct: 179 TKPAEDVKPVTPAKPVEDVKPETPAKPVEEVKPETPTKP----AEEVKPETPAKPVEDVK 234
Query: 148 SVLTTAPSSSISYVSAVRPL 167
T P + + +P+
Sbjct: 235 PETPTKPVEEVKPETPAKPV 254
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 11/189 (5%)
Query: 170 ESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD 229
E+D + Q ++ R + S+ + G +IGK G + L+ E G V +
Sbjct: 28 EADGPPKTEEEYAQSTLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVH 87
Query: 230 ERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGL-DFSSNKGLLVNARLVVASNQ 288
+R++TVT GP KA +V L+EG + G+ SN G RL+++ NQ
Sbjct: 88 DRVLTVT---GP---LQGTAKAYAIVAKGLLEGAPQLGMGGVVSNTGTHP-VRLLISHNQ 140
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
+G ++G+ G I ++ +G +R+++ + + S +R+V++ G ++ AV+ +
Sbjct: 141 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKC 197
Query: 349 LRDNHFSGT 357
L D+ GT
Sbjct: 198 LIDDWQRGT 206
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGP 241
+QEV + + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 261 EQEVVY-LFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVIITGP--P 317
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA ++ +L E F++ + + + A + V S G ++GKGG ++
Sbjct: 318 EAQF----KAQGRIYGKLKEENF-----FTAKEEVKLEAHIKVPSTAAGRVIGKGGKTVN 368
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + DQ END V V+I G F
Sbjct: 369 ELQNLTSAEVIVPRDQ---TPDENDDVFVKIIGHF 400
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 24/180 (13%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLI 233
R +QQE+ RIL VGA+IGK G I+ + + + + + GAT E+ I
Sbjct: 23 RQRQQELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAT-----EKAI 77
Query: 234 TVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLL 293
T+ +S + S A + ++ + + E K ++ V +++ ++ VG L+
Sbjct: 78 TIHSS---KEGCSQACRMILEIMEK--EANDTKIVEE-------VPLKILAHNSLVGRLI 125
Query: 294 GKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
GK G + ++ + TGT I I + Q L + +R + + G + A + +LR+ H
Sbjct: 126 GKEGRNLKKIEQDTGTKITISALQDL-TVYNQERTISVRGGVEECCKAEGEIMKKLREAH 184
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV---GATMPECDERLITVTASEG 240
Q +S ++ N+KVG +IGK G IR LQ +GA I + P R + + S
Sbjct: 174 QTMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSL- 232
Query: 241 PESRYSPAQKAVVLVFSRLIEGTS----EKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ A+K + V + G S +G + G ++ V + +VG ++GKG
Sbjct: 233 --ENINKAEKLIKDVIAEADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKG 290
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
G I ++ +G I++I L + +R V+++G+ +++
Sbjct: 291 GETIKSLQTRSGARIQLIPQHLPEGDQSKERTVRVTGDKKQIE 333
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGP 241
+QEV ++ VGA+IGK G I+ L A A I + P+ R++ +T P
Sbjct: 397 EQEV-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--P 453
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA ++ +L E F + + + + V ++ G ++GKGG ++
Sbjct: 454 EAQF----KAQGRIYGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 504
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGT 357
E++ +T + + DQ END+V V+I G F + A + ++ +++ H G
Sbjct: 505 ELQNLTAAEVVVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQ 561
Query: 358 LNTARTR 364
N A+ R
Sbjct: 562 SNQAQAR 568
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 182 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 236
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I++ ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 237 ISIHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 284
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 285 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 343
Query: 353 H 353
+
Sbjct: 344 Y 344
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R L S+ + G +IGKGG + L+ E G V + +R++T+T
Sbjct: 43 DEEYAQTQLTLRALVSSKEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTITG 102
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
SR A +V L+EG + +L+++ NQ+G ++G+ G
Sbjct: 103 GCDAVSR------AYAVVARALLEGAPAVSMGGVVQHNGTHPIKLLISHNQMGTIIGRQG 156
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 157 QRIKYIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAVWEICKCLVDDWQRGT 213
>gi|327263405|ref|XP_003216510.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Anolis
carolinensis]
Length = 425
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +SV
Sbjct: 16 NGKRPAEDTEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 75
Query: 222 -GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
++ P ER+++++A + + + L E KG DF
Sbjct: 76 PDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDFD------CEL 120
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
RL++ + G ++G G I E+R+ T T+I++ + C +DRVV I G+ +V +
Sbjct: 121 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSSDRVVLIGGKPDRVVE 177
Query: 341 AV 342
+
Sbjct: 178 CI 179
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 403
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 259 LIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
+ EG S G D+S G ++ ++ + + G ++GKGG I ++R +G
Sbjct: 324 MFEGGS--GYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 381
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
SI+I D+ L+ DR++ I+G ++++A Y
Sbjct: 382 SIKI--DEPLE--GSEDRIITITGTQDQIQNAQY 411
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPES 243
+ R L +N G+VIGKGG+ I Q+++GA I + P +R+ ++ S
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS----- 70
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ A L+ S++I+ D + + + +L+V G ++GKGG+ I +
Sbjct: 71 -LADVLTAFQLIISKIIK-------DDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAV 342
+ + SI++ S DQLL + DR+V I G ++ AV
Sbjct: 123 VEDSQASIKLSSQDQLLPGVI--DRIVTIGGNVDQIIKAV 160
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 18/164 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + A P + ER +T+ +
Sbjct: 302 QETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGT 360
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 361 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTIELLVASSQVGRIIGKGGQ 409
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA 341
+ E+++VTG+ I++ L ++ V I G F V+ A
Sbjct: 410 NVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 453
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 81 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 135
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ R++E ++ S+NKG + +++ +N +G ++GK
Sbjct: 136 YGN--PEN--------CTNACKRILEVMQQEA--NSTNKGEIC-LKILAHNNLIGRIIGK 182
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 183 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 239
>gi|363744462|ref|XP_425032.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Gallus gallus]
Length = 430
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 165 RPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GA 223
RP + A +R + V RIL + GAVIGKGG I+AL+++ A +SV +
Sbjct: 22 RPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS 81
Query: 224 TMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV 283
+ P ER+++++A + + + L E KG DF RL+
Sbjct: 82 SGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDFD------CELRLL 126
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
+ + G ++G G I E+R+ T T+I++ + C DRVV I G+ +V + +
Sbjct: 127 IHQSLAGGIIGVKGAKIKELRENTQTTIKLFQEC---CPHSTDRVVLIGGKPDRVVECI 182
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 259 LIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
L EG S G D+S G ++ ++ + + G ++GKGG I ++R +G
Sbjct: 328 LFEGGS--GYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 385
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
SI+I D+ L+ DR++ I+G ++++A Y
Sbjct: 386 SIKI--DEPLE--GSEDRIITITGTQDQIQNAQY 415
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 354 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 407
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 164 VRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
V P S+ S + + Q S +I N +VG +IGKGG I+ LQ ++GA I V
Sbjct: 100 VNPYSVPSISPSAVSYSHQVGGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTR 159
Query: 224 TM---PECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
M P R + + S P++ + A+K + V + G S G+ G +
Sbjct: 160 DMDADPNSATRTVELMGS--PDAIAT-AEKLINEVLAEAETGGS--GIIARRVAGQAGSD 214
Query: 281 RLV--VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV 338
V + +N+VG ++GKGG I M+ TG I++I L + +R ++I G ++
Sbjct: 215 EYVSKIPNNKVGLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQI 274
Query: 339 KDA 341
+ A
Sbjct: 275 ESA 277
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ ER++ +T PE+++ KA +
Sbjct: 327 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--PEAQF----KAQGRI 380
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
F +L E F+ + + + A + V S+ G ++GKGG ++E++ +T + +
Sbjct: 381 FGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPR 435
Query: 316 DQLLKCISENDRV-VQISGEF 335
DQ EN V V+I G F
Sbjct: 436 DQ---TPDENAEVIVRIIGHF 453
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+EV +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 204 EEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 261
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +S+ G N
Sbjct: 262 ----IDACANAEMEIMKKLREAFENDMLAVNSHSGYFPNMYPHHHFGPFPHHHSYPEQET 317
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 318 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 374
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 375 KAQGRIFGKLKEENF 389
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 30/182 (16%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
++T+Q + RIL VGA+IGK G I+ + + + + + GA E+
Sbjct: 118 SQTRQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAA-----EKP 172
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQV 289
+T+ A+ PE S A + ++ + + E T E L ++ GL V
Sbjct: 173 VTIHAT--PEGT-SEACRMILEIMQKEAEDTKLAEEVPLKILAHNGL------------V 217
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
G L+GK G + ++ TGT I I S Q L I +R + + G +A + +L
Sbjct: 218 GRLIGKEGRNLKKIEHETGTKITISSLQDL-SIYNPERTITVKGTIDACANAEMEIMKKL 276
Query: 350 RD 351
R+
Sbjct: 277 RE 278
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPES 243
+ R L +N G+VIGKGG+ I Q+++GA I + P +R+ ++ S
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS----- 70
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEM 303
+ A L+ S++I+ D + + + +L+V G ++GKGG+ I +
Sbjct: 71 -LADVLTAFQLIISKIIK-------DDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 304 RKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAV 342
+ + SI++ S DQLL + DR+V I G ++ AV
Sbjct: 123 VEDSQASIKLSSQDQLLPGVI--DRIVTIGGNVDQIIKAV 160
>gi|404351641|ref|NP_998156.3| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 431
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + A +R + V R+L + GAVIGKGG I+AL+++ A +S
Sbjct: 19 TNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVS 78
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V ++ P ER+++V+A + ++ + L E G DF
Sbjct: 79 VPDSSGP---ERILSVSAD------IDTIGEILLKIIPTLEEYQHYSGTDFD------CE 123
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
RL++ + G ++G G I E+R+ T T+I++ + C DRVV + G+ +V
Sbjct: 124 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVLVGGKPERVV 180
Query: 340 DAV 342
+ +
Sbjct: 181 ECI 183
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+S G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 348 YSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 403
Query: 330 QISGEFSKVKDAVY 343
I+G ++++A Y
Sbjct: 404 TITGTQDQIQNAQY 417
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 409
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESR 244
++L + G++IGKGG I LQ E GA I + + P ER++ +T SE
Sbjct: 68 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSE---DS 124
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMR 304
K ++ S+ + ++ + ++N ++VV ++ G ++GKGG I +
Sbjct: 125 LKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIM 184
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTL-NTART 363
+ TG+ ++ IS + I+ +RV+ I+GE + A + ++ ++ SG+ N +
Sbjct: 185 EQTGSRVQ-ISQKATNGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPNISYA 243
Query: 364 RSTSSVLTET---SPYSRLKDPASFGVHSSVAVS 394
T V SPY+ P G S A++
Sbjct: 244 TYTGPVANANPTGSPYASPMSPLQNGSASPTALA 277
>gi|168026870|ref|XP_001765954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682860|gb|EDQ69275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 770
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV---GATMPECDERLITVTASEGPES 243
S +I N KVG VIGKGG I+ LQ ++GA I V G + P R + + + PE
Sbjct: 309 SRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGT--PE- 365
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV---VASNQVGCLLGKGGTII 300
+ S A++ V V + G G F V V +N+VG ++G+GG I
Sbjct: 366 QISRAEQLVKDVIAEASTGA--PGGAFGGRSFGGHGGEQVQIKVPNNKVGLIIGRGGETI 423
Query: 301 SEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
++ +G I++ +D + +RVV + G KV D Y +
Sbjct: 424 KSLQSRSGARIQVQNDSETEP-GATERVVTLIG-IKKVTDMAYEL 466
>gi|449514357|ref|XP_002192510.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Taeniopygia
guttata]
Length = 434
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 162 SAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
+ RP + A +R + V RIL + GAVIGKGG I+AL+++ A +SV
Sbjct: 16 NGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 75
Query: 222 -GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA 280
++ P ER+++++A + + + L E KG DF
Sbjct: 76 PDSSGP---ERILSISAD------IETIGEILKKIIPTLEEYQHYKGSDFD------CEL 120
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
RL++ + G ++G G I E+R+ T T+I++ + C DRVV I G+ +V +
Sbjct: 121 RLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVLIGGKPDRVVE 177
Query: 341 AV 342
+
Sbjct: 178 CI 179
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 259 LIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
L EG S G D+S G ++ ++ + + G ++GKGG I ++R +G
Sbjct: 332 LFEGGS--GYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 389
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
SI+I D+ L+ DR++ I+G ++++A Y
Sbjct: 390 SIKI--DEPLE--GSEDRIITITGTQDQIQNAQY 419
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 358 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 411
>gi|224136131|ref|XP_002327388.1| predicted protein [Populus trichocarpa]
gi|222835758|gb|EEE74193.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE- 239
++ Q S ++ NDKVG +IGKGG IR LQ +GA I + E D + T
Sbjct: 171 SEDQTTSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDA-EADLQSTTRPVELI 229
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEK----GLDFSS--------------NKGLLVNAR 281
G S S A+K + V + G S GL S+ N+ L +
Sbjct: 230 GSLSSISKAEKLINAVIAEADAGGSPSLIAMGLATSAQAAEVGDQLEIPIPNEKLCFSTM 289
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L+ A QVG ++G+GG I ++ +G I++I L + +R V+++G+ +++ A
Sbjct: 290 LMQACIQVGLIIGRGGETIKGLQAKSGARIQLIPQHLPEGDESKERTVRVTGDTRQIETA 349
>gi|260941532|ref|XP_002614932.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
gi|238851355|gb|EEQ40819.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
Length = 370
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
TQ ++FR+L S + G +IG+ G +I +++ E + P ER++TV+
Sbjct: 12 TQPGLINFRVLVSAKEAGCLIGQNGAVIDSIRDETATRAGISQLRPGTHERILTVSG--- 68
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFS-----------SNKGLLVNARLVVASNQV 289
A KA+ L+ +SE +S + +G R++V ++Q+
Sbjct: 69 ---LVDSAAKALSYFAQALVNASSETPFSYSYFPLKQMSRIANVEGQTTVLRMMVPNSQI 125
Query: 290 GCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
G L+G G I ++++ S+ I+S L SE R+V++ G + DAV + GR
Sbjct: 126 GTLIGARGLRIQQIQRQCNVSM-IVSKSFLAGSSE--RLVELQGTVDNLYDAV-RIVGR 180
>gi|380479025|emb|CCF43264.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 384
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGK G + L+ E G V + +R++T+T
Sbjct: 40 DEEYAQAQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITG 99
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
G +S +A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 100 --GCQS----VSEAYSIVARALLEGAPSLGMGGVVQNNGTHPIKLLISHNQMGTIIGRQG 153
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ +G +R+++ + + S +R+V++ G +K AV+ + L D+ GT
Sbjct: 154 LKIKHIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIKGAVWEICKCLVDDWQRGT 210
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR + +GA + + A P + ER +T+ +
Sbjct: 344 QETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT 402
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE+++ KA L+F ++ E G D + + ++V S QVG ++GKGG
Sbjct: 403 --PEAQW----KAQYLIFEKMREEGFVSGTD-----DVRLTVEILVPSAQVGRIIGKGGQ 451
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ E+++VTG+ I++ + E + V I G F V+ A
Sbjct: 452 NVRELQRVTGSIIKLPEHTTNTPVDE-ETTVHIIGPFFSVQSA 493
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + R+L +++ VGA+IG+ G+ IR + + A + +VG+ E+ IT+
Sbjct: 123 RQTDFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSL-----EKAITI 177
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ S + R++E ++ + +NKG + +++ +N +G ++GK
Sbjct: 178 YGN--PENCTSACK--------RILEVMQQEANN--TNKGEIC-LKILAHNNLIGRIIGK 224
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + ++ +LR ++
Sbjct: 225 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGSIDNMSRGESQISAKLRQSY 281
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
VSFR+ C + VIGK G +I L+ +A A I V + + ER+I+V +GP
Sbjct: 202 VSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISV---KGPAENV 258
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ KA L+ ++E ++ S + N ++++ VG ++GKGG+ E+ +
Sbjct: 259 A---KAFGLITRAILEEPEDEPASIMSRQ---YNLKVLIPHPMVGYIIGKGGSKFREIEE 312
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
+ ++ L DRV+ + G + A+Y ++
Sbjct: 313 NSAAKLKAAEQPLPNST---DRVLSVLGVGDAIHIAIYYIS 350
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRVVIITGP--PEAQF----KAQGRI 474
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + A + V S G ++GKGG ++E++ +T + +
Sbjct: 475 YGKLKEENF-----FGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 530 DQ---TPDENDQVVVKITGHF 547
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 71 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 118
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 119 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 176
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
+RVV +SGE +V AV + +++ D S LN + V SPY+ D
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 236
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R L S G +IGKGG + L+ G V +P ER++T+ S PE
Sbjct: 1 MALRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGS--PEG-- 56
Query: 246 SPAQKAVVLVFSRLIE---GTSEKGLDFS---SNKGLLVNARLVVASNQVGCLLGKGGTI 299
KA + ++L+ G+ E LD S +N ++ RL+V+ N +G ++G+GG
Sbjct: 57 --IAKAYQHIIAQLVSASAGSPE--LDASVVATNPHTMI--RLLVSHNLMGTIIGRGGLK 110
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
I ++ +G + D L + +RVV++ G ++ A+Y ++ L ++
Sbjct: 111 IKAIQDASGARLVAQKDMLPQS---TERVVEVHGVPDEIGRAIYEISKSLLED 160
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 37/162 (22%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGA-FISVGATMPECDERLITVTASEGPESR-- 244
R+L S++ +G +IG+GG I+A+Q +GA ++ +P+ ER++ V R
Sbjct: 91 IRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIGRAI 150
Query: 245 -------------------YSPAQKAVVLV---------FS-----RLIEGTSEKGLDFS 271
Y P FS R I T G +
Sbjct: 151 YEISKSLLEDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISPTPSAGSQST 210
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRI 313
N L+ + + S+ VGC++G+GGT I+E+R+++G+ I I
Sbjct: 211 PN-ALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISI 251
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 23/168 (13%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---------ATMPECDERLIT 234
QE ++ + N+ VGA+IG G+ IR + + A + + ++ ER +T
Sbjct: 351 QETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQERKVT 409
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
+ S PE+++ KA L+F ++ E+G S + + + +VVAS+QVG ++G
Sbjct: 410 IVGS--PEAQW----KAQYLIFEKM----REEGF-MSGSDDVRLTVAIVVASSQVGRIIG 458
Query: 295 KGGTIISEMRKVTGTSIRIISDQLLKCISENDR--VVQISGEFSKVKD 340
KGG + E+++VTG+ I++ + ND V I G F V++
Sbjct: 459 KGGQNVRELQRVTGSLIKLPEQPQPPTAAGNDHETTVHIVGHFYSVQE 506
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 25/172 (14%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITVTASEGP 241
R+L +D VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+ + P
Sbjct: 141 LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSL-----EKAITIYGN--P 193
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
++ + + R++E ++ + +NKG + +++ +N +G ++GKGG I
Sbjct: 194 DNCTNACK--------RILEVMQQEANN--TNKGEIC-LKILAHNNLIGRIIGKGGNTIK 242
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
+ + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 243 RIMQETDTKITVSSINDINSFNL-ERIITVKGTIENMAKAESQISAKLRQSY 293
>gi|66910286|gb|AAH96867.1| Heterogeneous nuclear ribonucleoprotein K, like [Danio rerio]
gi|182889168|gb|AAI64732.1| Hnrpkl protein [Danio rerio]
Length = 431
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 19/183 (10%)
Query: 161 VSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFIS 220
+ RP + A +R + V R+L + GAVIGKGG I+AL+++ A +S
Sbjct: 19 TNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLRSKNAGAVIGKGGKNIKALRTDYNASVS 78
Query: 221 V-GATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN 279
V ++ P ER+++V+A + ++ + L E G DF
Sbjct: 79 VPDSSGP---ERILSVSAD------IDTIGEILLKIIPTLEEYQHYSGTDFD------CE 123
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
RL++ + G ++G G I E+R+ T T+I++ + C DRVV + G+ +V
Sbjct: 124 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---CCPHSTDRVVLVGGKPERVV 180
Query: 340 DAV 342
+ +
Sbjct: 181 ECI 183
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
+S G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ DR++
Sbjct: 348 YSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSEDRII 403
Query: 330 QISGEFSKVKDAVY 343
I+G ++++A Y
Sbjct: 404 TITGTQDQIQNAQY 417
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 356 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 409
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 18/166 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG---ATMP--ECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR + +GA + + A P + ER +T+ +
Sbjct: 343 QETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT 401
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE+++ KA L+F ++ E G D + + ++V S QVG ++GKGG
Sbjct: 402 --PEAQW----KAQYLIFEKMREEGFVSGTD-----DVRLTVEILVPSAQVGRIIGKGGQ 450
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYN 344
+ E+++VTG+ I++ + E + V I G F V+ +V N
Sbjct: 451 NVRELQRVTGSIIKLPEHTAATPVDE-ETTVHIIGPFFSVQVSVEN 495
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + R+L +++ VGA+IG+ G+ IR + + A + +VG+ E+ IT+
Sbjct: 122 RQTDFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSL-----EKAITI 176
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ S + R++E ++ + +NKG + +++ +N +G ++GK
Sbjct: 177 YGN--PENCTSACK--------RILEVMQQEANN--TNKGEIC-LKILAHNNLIGRIIGK 223
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + ++ +LR ++
Sbjct: 224 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGSIDNMSRGESQISAKLRQSY 280
>gi|15225229|ref|NP_180167.1| upstream element-binding protein [Arabidopsis thaliana]
gi|19310435|gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana]
gi|20197266|gb|AAM15002.1| unknown protein [Arabidopsis thaliana]
gi|20197368|gb|AAM15045.1| unknown protein [Arabidopsis thaliana]
gi|110741998|dbj|BAE98938.1| hypothetical protein [Arabidopsis thaliana]
gi|330252684|gb|AEC07778.1| upstream element-binding protein [Arabidopsis thaliana]
Length = 632
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q + +I N +VG +IGKGG I+ LQ ++GA I V M P C R + +T +
Sbjct: 132 QGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGT-- 189
Query: 241 PESRYSPAQ--KAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR-------LVVASNQVGC 291
P Q KA L+ L E + G + + + + +N+VG
Sbjct: 190 ------PDQISKAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQAGADQFVMKIPNNKVGL 243
Query: 292 LLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
++GKGG I M+ TG I++I L +R +QI G
Sbjct: 244 IIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDG 285
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q++S R L +IG+ G + ++ ++GA +++ ++P ER++ V
Sbjct: 86 QQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFG------ 139
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISE 302
A AV F ++ +++ D +S G V + ++ ++++G ++G+GG+ I E
Sbjct: 140 ----ALDAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKE 195
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
++ +G + S+ +L +E R++ +SG + AVY +
Sbjct: 196 IQDASGARLN-ASEVMLPGSTE--RILSVSGVADAIHIAVYYI 235
>gi|449676986|ref|XP_002155841.2| PREDICTED: uncharacterized protein LOC100213921 [Hydra
magnipapillata]
Length = 643
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 194 NDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CD-ERLITVTASEGPESRYSPAQK 250
N VG VIG+GG +I LQS++GA I V P D +R IT+T S K
Sbjct: 41 NKLVGLVIGRGGEMINRLQSDSGAKIQVAPDPPPNMMDIDRQITITGSS------EAVSK 94
Query: 251 AVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTS 310
A L+ EG + L ++N + + +A+ +VG ++GKGG I +++ G
Sbjct: 95 AKQLIEQIRNEGKVPERLMLAANLPGEFSIEMKIAAGKVGLVIGKGGETIKSLQERAGCK 154
Query: 311 IRIISDQLLKCISENDRVVQISGEFSKV 338
+ + D +E + ++ISGE SKV
Sbjct: 155 MILFQDGEYAQAAE--KPLKISGEQSKV 180
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
V+ R L +IGKGG I+ ++ +AG + V ++P ER++ V+
Sbjct: 188 VTLRALIVTQDASIIIGKGGQSIKEIREKAGVKVLVSESIPNNPERILNVSG-------- 239
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMR 304
V F ++ +++ D S G V R +V ++++G ++GK G I E++
Sbjct: 240 --LLDGVSKAFGLIVRRINDEPFDVPSVPGSRAVTIRFIVPNHRMGSIIGKQGAKIKEIQ 297
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLNTARTR 364
+G ++ ++ +L +E R++ ISG + AVY TG + H +N R
Sbjct: 298 DASGARLQ-ATESMLPGSTE--RILSISGVADAIHIAVY-YTGAILAEHSDRAVNNTPYR 353
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPES 243
Q++S R L +IG+ G + ++ ++GA +++ ++P ER++ V
Sbjct: 86 QQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFG------ 139
Query: 244 RYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISE 302
A AV F ++ +++ D +S G V + ++ ++++G ++G+GG+ I E
Sbjct: 140 ----ALDAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKE 195
Query: 303 MRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
++ +G + S+ +L +E R++ +SG + AVY +
Sbjct: 196 IQDASGARLN-ASEVMLPGSTE--RILSVSGVADAIHIAVYYI 235
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 166 PLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM 225
P S+ S + + Q S +I N +VG +IGKGG I+ LQ ++GA I V M
Sbjct: 104 PYSVPSISPSAVSYSYQGGGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDM 163
Query: 226 ---PECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARL 282
P R + + S P++ + A+K + V + G S G+ G +
Sbjct: 164 DADPNSATRTVELMGS--PDAIAT-AEKLINEVLAEAETGGS--GIVARRVAGQAGSDEY 218
Query: 283 V--VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKD 340
V + +N+VG ++GKGG I M+ TG I++I L + +R ++I G +++
Sbjct: 219 VSKIPNNKVGLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIES 278
Query: 341 A 341
A
Sbjct: 279 A 279
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM---PECDERLITVTASEG 240
Q + +I N +VG +IGKGG I+ LQ ++GA I V M P R + +T G
Sbjct: 132 QGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNATTRTVDLT---G 188
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNAR---LVVASNQVGCLLGKGG 297
+ S A++ + V G + G A + + +N+VG ++GKGG
Sbjct: 189 TPDQISKAEQLITDVLQEAEAGNTAGSGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGG 248
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
I M+ TG I++I L +R +QI G
Sbjct: 249 ETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDG 284
>gi|387018122|gb|AFJ51179.1| Heterogeneous nuclear ribonucleoprotein K-like [Crotalus
adamanteus]
Length = 426
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTA 237
+R + V RIL + GAVIGKGG I+AL+++ A +SV ++ P ER+++++A
Sbjct: 33 SRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP---ERILSISA 89
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ + + L E KG DF RL++ + G ++G G
Sbjct: 90 D------IETIGEILKKIIPTLEEYQHYKGSDFD------CELRLLIHQSLAGGIIGVKG 137
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
I E+R+ T T+I++ + C +DRVV I G+ +V + +
Sbjct: 138 AKIKELRENTQTTIKLFQE---CCPHSSDRVVLIGGKPDRVVECI 179
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 259 LIEGTSEKGLDFSSNKGL---------LVNARLVVASNQVGCLLGKGGTIISEMRKVTGT 309
+ EG S G D+S G ++ ++ + + G ++GKGG I ++R +G
Sbjct: 324 MFEGGS--GYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGA 381
Query: 310 SIRIISDQLLKCISENDRVVQISGEFSKVKDAVY 343
SI+I D+ L+ DR++ I+G ++++A Y
Sbjct: 382 SIKI--DEPLE--GSEDRIITITGTQDQIQNAQY 411
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + ++R+IT+T ++
Sbjct: 350 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 403
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 171 SDRVATLDA----RTQ----QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG 222
+D++ L+A RT+ Q +++ R + ++ + G +IGK G + L+ + G V
Sbjct: 18 ADKMGGLNADERPRTEEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVS 77
Query: 223 ATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARL 282
+P +R++TVT + + A LV L++G + G+ RL
Sbjct: 78 KVVPGVHDRVLTVTGA------LTGIADAYGLVADSLVKGAPQMGMGGVVGSPNTHPIRL 131
Query: 283 VVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
+++ NQ+G ++G+ G I +++ +G +R+++ + + S +R+V++ G ++ +V
Sbjct: 132 LISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQKSV 188
Query: 343 YNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVAVSHDFSQP 400
+ + L D+ R +VL SP R++ A ++ + V P
Sbjct: 189 WEIGKCLIDDE---------QRGYGTVL--YSPAVRVQGGAPPAINGASPVGFGGGAP 235
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL +++ AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T + + + + ++
Sbjct: 63 GGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGT------VDAIMEVMEFIMDKIR 116
Query: 261 EG---TSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
E TS+ +DF S K +++V ++ G ++GK G I ++++ +G+ ++I
Sbjct: 117 EKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQI- 175
Query: 315 SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT-LNTARTRSTSSVLTET 373
Q K +S +R + + GE A++ + ++ D+ SGT LN + + V
Sbjct: 176 -SQKAKDLSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSYADVSGPVANYN 234
Query: 374 ---SPYSR 378
SPY++
Sbjct: 235 PTGSPYAQ 242
>gi|45361501|ref|NP_989327.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
gi|39794355|gb|AAH64170.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 399
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 165 RPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GA 223
RP + A +R V RIL + GAVIGKGG I+AL+++ A +SV +
Sbjct: 19 RPAEDMEEEQAFKRSRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS 78
Query: 224 TMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLV 283
+ P ER+++++A + + + L E KG DF RL+
Sbjct: 79 SGP---ERILSISAD------IETIGEILKKIIPTLEEYQHFKGNDFD------CELRLL 123
Query: 284 VASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
+ + G ++G G I E+R+ T T+I++ + C DRVV I G+ +V + +
Sbjct: 124 IHQSLAGGIIGVKGAKIKELREKTQTTIKLFQE---CCPHSTDRVVLIGGKPDRVVECI 179
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + D+R+IT+T ++
Sbjct: 321 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQ 374
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 270 FSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVV 329
F G ++ ++ + + G ++GKGG I ++R +G SI+I D+ L+ +DR++
Sbjct: 313 FGDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLE--GSDDRII 368
Query: 330 QISGEFSKVKDAVY 343
I+G ++++A +
Sbjct: 369 TITGTQDQIQNAQF 382
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESR 244
F+IL GA+IGKGG I LQ EAGA + + + P ER+ +T S
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGS------ 93
Query: 245 YSPAQKAVVLVFSRLIEGTSEK-------GLDFSSNKGL--LVNARLVVASNQVGCLLGK 295
+ V+ + ++E EK +DF + +++V ++ G ++GK
Sbjct: 94 ----VEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGK 149
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS 355
GG+ I ++++ +G ++I ++E R + + GE K A + ++ ++ S
Sbjct: 150 GGSYIKQIKEESGAYVQISQKSKDHALAE--RCITVIGEMDNNKKACQLILAKIVEDPQS 207
Query: 356 GT-LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSV 391
G+ L+ + T V S +P+S VHS+V
Sbjct: 208 GSCLHVSYAEVTGPVANFNPTGSPYANPSS--VHSTV 242
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CDERLITVTASEG 240
++E +IL N G +IGKGG+ I+ ++ E+GA++ + + ER ITV
Sbjct: 129 EREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCITVIG--- 185
Query: 241 PESRYSPAQKAVVLVFSRLIE 261
+KA L+ ++++E
Sbjct: 186 ---EMDNNKKACQLILAKIVE 203
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L ++G++IGK G ++ ++ ++ A I++ + C ER+ T+T S R
Sbjct: 19 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITI--SEGSCPERITTITGSTDAVFR- 75
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
AV ++ +L E D ++ V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 76 -----AVSMIAFKLEEDLG----DGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRE 126
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
+G +++ D L + +R V +SG
Sbjct: 127 SSGAQVQVAGDLLP---NSTERAVTVSG 151
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 147 NSVLTTAPSSSISYVSAVRPLSLESDRVATLDAR---TQQQEVSFRILCSNDKVGAVIGK 203
+S + T PS I+ S RPL +++ AT + ++L GA+IGK
Sbjct: 4 DSGMETCPSPEIAD-SRKRPLDCDAENGATKRSHYGSGGDGTYHLKVLVPGVAAGAIIGK 62
Query: 204 GGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLI 260
GG I LQ + GA + + + P ER+ +T + + + + ++
Sbjct: 63 GGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGT------VDAIMEVMEFIMDKIR 116
Query: 261 EG---TSEKGLDFSSNKGLL---VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
E TS+ +DF S K +++V ++ G ++GK G I ++++ +G+ ++I
Sbjct: 117 EKPDLTSKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQI- 175
Query: 315 SDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT-LNTARTRSTSSVLTET 373
Q K +S +R + + GE A++ + ++ D+ SGT LN + + V
Sbjct: 176 -SQKAKDLSLQERCITVIGEKENNHRALHMILAKVADDPQSGTCLNVSYADVSGPVANYN 234
Query: 374 ---SPYSR 378
SPY++
Sbjct: 235 PTGSPYAQ 242
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDR-VVQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+ VV+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVVVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A + ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACRMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A +T ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEITKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSP 247
++ VGA+IGK G I+ L A A I + P+ R++ +T PE+++
Sbjct: 357 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF-- 412
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
KA ++ +L E F + + + + V ++ G ++GKGG ++E++ +T
Sbjct: 413 --KAQGRIYGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLT 465
Query: 308 GTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTART 363
+ + DQ END+V V+I G F + A + ++ +++ H G N A+
Sbjct: 466 AAEVVVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQA 522
Query: 364 R 364
R
Sbjct: 523 R 523
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 137 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 191
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 192 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 239
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 240 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 298
Query: 353 H 353
+
Sbjct: 299 Y 299
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|356495760|ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
Length = 793
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISV---GATMPECDERLITVTASEGPESRY 245
+I N+KVG +IGK G IR LQ +GA I + P C R + + S
Sbjct: 201 KIEVPNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPLCATRSVELIGSL---ESI 257
Query: 246 SPAQKAVVLVFSRLIEGTSE----KGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
A+K + V + G S +GL + ++ V + +VG ++G+GG I
Sbjct: 258 DKAEKLMNAVIAEADAGGSPSLVARGLSPAQATVGSEQIQIQVPNEKVGLIIGRGGETIK 317
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
++ +G I++I L + +R VQ++G+ +++
Sbjct: 318 SLQTKSGARIQLIPQHLPEGDDSKERTVQVTGDKRQIE 355
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNLAQAR 575
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ Q ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 18/166 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPEC--DERLITVTASEGPESRYS 246
R L + GA+IG+GG IRAL+ E A I++ PE ER++ + + SR +
Sbjct: 99 RFLIPSKVAGAIIGRGGATIRALREEYQAIINI----PEARAPERVLKICVN----SRET 150
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
+V + +++ + KG K R++V S+Q G ++G G+ + +R+
Sbjct: 151 --LHTIVSQIAEILKNENAKGSHNGRRKEGETELRILVQSSQAGAIIGTKGSTVKNLRET 208
Query: 307 TGTSIRIISDQLLKCISENDRVVQISGEFS---KVKDAVYNVTGRL 349
TG+ I I + C + ++RV I G + K +Y++ R+
Sbjct: 209 TGSRININPE---CCPNSSERVAAIMGPPATVVKCISMIYDILERV 251
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D K L N N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTADEVPLKTLAHN-------NFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|367027192|ref|XP_003662880.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
gi|347010149|gb|AEO57635.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
Length = 374
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q +++ R + S+ + G +IGKGG + L+ E G V + +R++T+
Sbjct: 42 DEEYAQTQLTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTI-- 99
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
S G E+ +A +V L+EG G+ +L+++ NQ+G ++G+ G
Sbjct: 100 SGGCEA----ISRAYSVVARSLLEGAPTMGMGGVIQNNGTHPIKLLISHNQMGTIIGRQG 155
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGT 357
I ++ V+G +R+++ + + S +R+V++ G ++ AV+ + L D+ GT
Sbjct: 156 LKIKYIQDVSG--VRMVAQKEMLPQS-TERIVEVQGTPEGIQRAVWEICKCLVDDWQRGT 212
>gi|355753971|gb|EHH57936.1| hypothetical protein EGM_07682 [Macaca fascicularis]
Length = 532
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSP 247
++ VGA+IGK G I+ L A A I + P+ R++ +T PE+++
Sbjct: 364 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF-- 419
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
KA ++ +L E F + + + + V ++ G ++GKGG ++E++ +T
Sbjct: 420 --KAQGRIYGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLT 472
Query: 308 GTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTART 363
+ + DQ END+V V+I G F + A + ++ +++ H G N A+
Sbjct: 473 AAEVVVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQA 529
Query: 364 R 364
R
Sbjct: 530 R 530
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
R+L + GAVIGKGG I+ L++E A +++ + + ER++T+ A
Sbjct: 107 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDS--QTPERIVTIVAE------IDN 158
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
+ V + RL E + D + RL+V + G ++G+GG I E+R+ T
Sbjct: 159 VIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREET 218
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
T +++ S C +RV+QI G K+ V + L++ G
Sbjct: 219 STQLKVYSQ---CCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKG 264
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 278 VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII-SDQLLKCISENDRVVQISGE 334
V +L+V S+Q+GC++GKGG II + +G I I+ +D LL C D +VQISGE
Sbjct: 82 VTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSCALSFDELVQISGE 139
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 171 SDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
S++V + D Q V+ ++L ++D++G VIGKGG II+ + SE+GA I +
Sbjct: 68 SEKVHSEDFEEASQ-VTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYI 117
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 36/192 (18%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM-PECDERLITVTASEGPESR 244
V+ + + N ++G+VIGKGG+ I+ +Q +GA ++ M P ER+++V
Sbjct: 85 VTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVA----- 139
Query: 245 YSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGL---------LVNA-----------RLVV 284
A V + LIE +++ + ++N + NA ++ +
Sbjct: 140 -DAIHIATYYVGNILIE--AQERMPSTANASYRPGNPTRRPITNAPYPGSTYVQTQQIYI 196
Query: 285 ASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLL-------KCISENDRVVQISGEFSK 337
++ VGC++GKGG+ I+E+R ++ + I+I+ + SE +R+V I+G+ +
Sbjct: 197 PNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITGQPAN 256
Query: 338 VKDAVYNVTGRL 349
++ AV + RL
Sbjct: 257 IQMAVQMLYHRL 268
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
+ R L +IG+ G + ++ ++GA + V ++P ER++ V+ GP
Sbjct: 2 IHMRCLIVTQDASIIIGRAGAHVNEIREKSGARVVVSESIPGNPERILNVS---GPLDAV 58
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMR 304
S KA L+ R+ +++ D S G V + ++ ++++G ++GKGG+ I E++
Sbjct: 59 S---KAFGLIVRRI----NDEPFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQ 111
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+G + S+ +L +E RV+ ++G + A Y V
Sbjct: 112 DASGARLN-ASEGMLPGSTE--RVLSVAGVADAIHIATYYV 149
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
VSFR+ C + VIGK G +I L+ +A A I V + + ER+I V +GP
Sbjct: 202 VSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILV---KGPAENV 258
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+ KA L+ ++E ++ S + N ++++ VG ++GKGG+ E+ +
Sbjct: 259 A---KAFGLITRAILEEPEDEPASIMSRQ---YNLKVLIPHPMVGYIIGKGGSKFREIEE 312
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
+ ++ L DRV+ + G + A+Y ++
Sbjct: 313 NSAAKLKAAEQPLPNS---TDRVLSVLGVGDAIHIAIYYIS 350
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 164 VRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
+ PLS +S + Q S +I N +VG +IGK G IR +Q ++GA I V
Sbjct: 122 IPPLSSQSS-APQYSSYGGYQGTSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTR 180
Query: 224 TMPECDERLIT--VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA- 280
E + +T V S P+ KA L+ L E + S K NA
Sbjct: 181 DH-EAEPGALTRPVELSGNPDQ----ISKAEQLIKEVLAEADAGSSGGGSGRK---YNAP 232
Query: 281 -------RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG 333
++ +A+N+VG ++GKGG I M++ TG I++I L + +R V I G
Sbjct: 233 QPGGETFQMKIANNKVGLVIGKGGETIKSMQQKTGARIQVIPLHLPAGDTSTERTVHIDG 292
Query: 334 EFSKVKDA 341
+++ A
Sbjct: 293 TPEQIESA 300
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNLAQAR 575
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ Q ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTADG-------VPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNLAQAR 575
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQVR 575
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 243
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 244 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 291
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 292 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 350
Query: 353 H 353
+
Sbjct: 351 Y 351
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEG 240
TQ ++S R L +IGK G I ++ ++ A +++ +P ER++TV+ G
Sbjct: 108 TQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVS---G 164
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTI 299
P S KA L+ R+ +++ D S G V R +V ++++G ++GK G+
Sbjct: 165 PLDAVS---KAFGLIVRRI----NDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSK 217
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSGTLN 359
I E+++ +G R+ + + + +RV+ ISG V AVY V L ++ N
Sbjct: 218 IKEIQEASGA--RLTAGEAM-LPGSTERVLSISGVADAVHIAVYYVGTILLEHQDRNANN 274
Query: 360 -----TARTRSTSSVLTETSPYSRLKDPASF 385
TA ST +PY+ + P +
Sbjct: 275 LPYRPTAGGPSTRPPAPGANPYAAPQQPFGY 305
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 281 RLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII--SDQLLKCISENDRVVQISGEFSKV 338
++ + ++ VGC++GKGG+ I+E+R ++ + I+I+ + S N+R+V I+G +
Sbjct: 333 QIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNI 392
Query: 339 KDAVYNVTGRL 349
+ AV + RL
Sbjct: 393 QMAVSLLYQRL 403
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVTASEGPE 242
+I ND VG +IGKGG+ I ++S + + I + A +ERL+T+T GP
Sbjct: 333 QIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTIT---GPP 389
Query: 243 SRYSPAQKAVVLVFSRL 259
Q AV L++ RL
Sbjct: 390 PNI---QMAVSLLYQRL 403
>gi|242048332|ref|XP_002461912.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
gi|241925289|gb|EER98433.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
Length = 579
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
Q+VSFR+L G +IGK G II+ ++ E GA I VGA + C ER+IT+ A E
Sbjct: 280 QQVSFRLLLPTYLAGGLIGKRGLIIKGIEDETGACIDVGAPVTGCKERVITICALE 335
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 417 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 470
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 471 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 526 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 575
>gi|194383878|dbj|BAG59297.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGP 241
+QE+ + VGA+IGK G I+ L AGA I + A P+ ER++ +T P
Sbjct: 127 EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP--P 183
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
E+++ KA +F +L E F+ + + + A + V S+ G ++GKGG ++
Sbjct: 184 EAQF----KAQGRIFGKLKEENF-----FNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVN 234
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRV-VQISGEF 335
E++ +T + + Q EN+ V V+I G F
Sbjct: 235 ELQNLTSAEVIVPRGQ---TPDENEEVIVRIIGHF 266
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 79/195 (40%), Gaps = 33/195 (16%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMP---ECDERLITVTASEG 240
+E+ +IL N VG +IGK G ++ ++ E G I++ + ER ITV +
Sbjct: 17 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKGT-- 74
Query: 241 PESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN--------------------- 279
A + + +L E L +++ G +
Sbjct: 75 ----VEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEI 130
Query: 280 ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVK 339
L + + VG ++GK G I ++ + G SI+I + ++R+V I+G
Sbjct: 131 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV---SERMVIITGPPEAQF 187
Query: 340 DAVYNVTGRLRDNHF 354
A + G+L++ +F
Sbjct: 188 KAQGRIFGKLKEENF 202
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 20/162 (12%)
Query: 185 EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-----GATMPECDERLITVTASE 239
E SF + N VGA+IG G+ IR + +GA + + G T ER +T+ +
Sbjct: 228 ETSF-LYIPNSAVGAIIGTRGSHIRNIIRFSGASVKITSLPEGTTAEPQAERKVTIVGT- 285
Query: 240 GPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTI 299
PE+++ KA L+F ++ E+G + + + + L+VAS+QVG ++GKGG
Sbjct: 286 -PEAQW----KAQYLIFEKM----REEGF-MPAGEDVRLTVELLVASSQVGRIIGKGGQN 335
Query: 300 ISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
+ EM++ T + I++ + + V I G F V+ A
Sbjct: 336 VREMQRTTSSVIKLPEQ---GASTGEETTVHIIGNFFAVQSA 374
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 27/181 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + R+L +++ VGA+IG+ G IR + + A + +VG+ E+ IT+
Sbjct: 7 RQPDFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENVGSL-----EKAITI 61
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + A + V+ V + + T NKG ++ +++ +N +G ++GK
Sbjct: 62 YGN--PEN-CTNACRRVLEVMQQEADNT---------NKG-EISLKILAHNNLIGRIIGK 108
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISEN-DRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
GG+ I R + T +I L S N +RV+ I G + A ++ +LR ++
Sbjct: 109 GGSTIK--RVMLETETKITVSSLNDVSSFNMERVITIKGTIDNMSRAEGMISAKLRQSYE 166
Query: 355 S 355
S
Sbjct: 167 S 167
>gi|242060324|ref|XP_002451451.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
gi|241931282|gb|EES04427.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
Length = 508
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRL--IEGTSEKGLDFSSNKGLLVNARLVVASNQVG 290
+ V+A E E+ SPA A + +F + IE + G S++ + + RL+V Q
Sbjct: 113 VLVSAKEEVEAEMSPAMNAAIKIFKHINEIEEINSDGT-LSASASDICSVRLLVPFEQAV 171
Query: 291 CLLGKGGTIISEMRKVTGTSIRI-ISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRL 349
L+GK G I + + TGT++RI D+LL + ++R+V+I G KV +A+ +V L
Sbjct: 172 HLIGKQGVTIKSIEESTGTTVRIRDEDELLSHETVDERIVEIRGASLKVLNALKSVLELL 231
Query: 350 R 350
R
Sbjct: 232 R 232
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 430 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGP--PEAQF----KAQGRI 483
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V S G ++GKGG ++E++ +T + +
Sbjct: 484 YGKLKEENF-----FGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 538
Query: 316 DQLLKCISENDR-VVQISGEF 335
DQ END VV+I+G F
Sbjct: 539 DQ---TPDENDEVVVKITGHF 556
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERLITVT 236
Q EV R+L VGA+IGK G IR + + + I + GA E+ IT+
Sbjct: 203 QTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAA-----EKPITIH 257
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
++ PE S A K ++ + + + T F+ + +++ +N VG L+GK
Sbjct: 258 ST--PEG-CSAACKIIMEIMQKEAQDTK-----FTEE----IPLKILAHNNFVGRLIGKE 305
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G + ++ + T T I I Q L + +R + + G A + ++R+++
Sbjct: 306 GRNLKKIEQDTDTKITISPLQDL-TLYNPERTITVKGSIEPCAKAEEEIMKKIRESY 361
>gi|312096639|ref|XP_003148731.1| hypothetical protein LOAG_13173 [Loa loa]
Length = 101
Score = 55.5 bits (132), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 11/111 (9%)
Query: 196 KVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
+VG++IGK G I+ ++ ++GA I++ C ER++T+T S G KA +++
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSTGT------INKAFIMI 52
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKV 306
++L + + L S K + RL+V + Q GC++GKGG+ I E+R+V
Sbjct: 53 CAKLQQDL--QALPNSIPKPP-ITMRLIVPATQCGCIIGKGGSKIKEIREV 100
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSP 247
++ VGA+IGK G I+ L A A I + P+ R++ +T PE+++
Sbjct: 273 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF-- 328
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
KA ++ +L E F + + + + V ++ G ++GKGG ++E++ +T
Sbjct: 329 --KAQGRIYGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLT 381
Query: 308 GTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTART 363
+ + DQ END+V V+I G F + A + ++ +++ H G N A+
Sbjct: 382 AAEVVVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQA 438
Query: 364 R 364
R
Sbjct: 439 R 439
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPECDERL 232
A+ QQ ++ R+L VGA+IGK G IR + + + I V GA E+
Sbjct: 53 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA-----EKA 107
Query: 233 ITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCL 292
I+V ++ PE S A K ++ + + E K D V +++ +N VG L
Sbjct: 108 ISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNFVGRL 155
Query: 293 LGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN 352
+GK G + ++ + T T I I S Q L + +R + + G A + ++R+
Sbjct: 156 IGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKKVREA 214
Query: 353 H 353
+
Sbjct: 215 Y 215
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 81/148 (54%), Gaps = 15/148 (10%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
++ R+L ++G++IGK G ++ ++ ++ A I++ + C ER+ T+T S ++ +
Sbjct: 19 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITI--SEGSCPERITTITGST--DAVF 74
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+AV ++ +L E D ++ V RLV+ ++Q G L+GK GT I E+R+
Sbjct: 75 ----RAVSMIAFKLEEDLG----DGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRE 126
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
+G +++ D L + +R V +SG
Sbjct: 127 SSGAQVQVAGDLLP---NSTERAVTVSG 151
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 36/224 (16%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVT 236
+T++ E ++L + G++IGKGG I LQ E GA I + + P ER+ V
Sbjct: 142 KTEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 201
Query: 237 ASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN---------------AR 281
+ +A+ V S + E E + + K +VN A+
Sbjct: 202 GTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNILQPQTTMNPDRAKQAK 249
Query: 282 LVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDA 341
L+V ++ G ++GKGG + + + +G +++ Q + I+ +RVV +SGE +V A
Sbjct: 250 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVTVSGEPEQVHKA 307
Query: 342 VYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
V + +++ D S LN + V SPY+ D
Sbjct: 308 VSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 351
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSP 247
++ VGA+IGK G I+ L A A I + P+ R++ +T PE+++
Sbjct: 295 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF-- 350
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
KA ++ +L E F + + + + V ++ G ++GKGG ++E++ +T
Sbjct: 351 --KAQGRIYGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLT 403
Query: 308 GTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTART 363
+ + DQ END+V V+I G F + A + ++ +++ H G N A+
Sbjct: 404 AAEVVVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQA 460
Query: 364 R 364
R
Sbjct: 461 R 461
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 175 ATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV------GATMPEC 228
A A+ QQ ++ R+L VGA+IGK G IR + + + I V GA
Sbjct: 71 AGAPAKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA---- 126
Query: 229 DERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQ 288
E+ I+V ++ PE S A K ++ + + E K D V +++ +N
Sbjct: 127 -EKAISVHST--PEG-CSSACKMILEIMHK--EAKDTKTAD-------EVPLKILAHNNF 173
Query: 289 VGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGR 348
VG L+GK G + ++ + T T I I S Q L + +R + + G A + +
Sbjct: 174 VGRLIGKEGRNLKKVEQDTETKITISSLQDL-TLYNPERTITVKGAIENCCRAEQEIMKK 232
Query: 349 LRDNH 353
+R+ +
Sbjct: 233 VREAY 237
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 23/240 (9%)
Query: 165 RPLSLESD------RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAF 218
RPL +ES+ R + ++L + G++IGKGG I LQ + G
Sbjct: 47 RPLEVESEAAMNTKRTNLGPGPVDDNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTN 106
Query: 219 ISVGAT---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTS---EKGLDFSS 272
+ + P ER+ +T GP + V V ++ E + G + +
Sbjct: 107 VKLSKANDFYPGTQERVALLT---GPVESLN---NVAVFVLEKIKESPQLGVKAGAETIT 160
Query: 273 NKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQIS 332
+ ++VV ++ G ++GKGG +I + + +G+ ++I Q I+ ++RV+ IS
Sbjct: 161 SPERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQI--SQKSDGITLSERVITIS 218
Query: 333 GEFSKVKDAVYNVTGRLRDNHFSGTLNTARTRSTSSVLTETSPYSRLKDPASFGVHSSVA 392
GE + A+ + +++++ SG+ N + + + +P P + GV SVA
Sbjct: 219 GEPENNRKAMSFIVNKIQEDPQSGSCNNLSYATITGPVANANPTG---SPFAEGVSPSVA 275
>gi|223947067|gb|ACN27617.1| unknown [Zea mays]
gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 704
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLIT--VTASEGP 241
Q S +I N +VG +IGK G IR +Q ++GA I V E + +T V S P
Sbjct: 137 QGTSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDH-EAEPGALTRQVELSGKP 195
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGL------DFSSNKGLLVNARLVVASNQVGCLLGK 295
E KA L+ L E + +++ + ++ +A+N+VG ++GK
Sbjct: 196 EQ----ISKAEQLIKEVLAEADAGSSGAGSGGRKYNATQPGAETFQMKIANNKVGLIIGK 251
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISG---EFSKVKDAVYNVTGRL--R 350
GG I M+ +G I++I L + +R V I G + K + VT L R
Sbjct: 252 GGETIKSMQANSGARIQVIPLHLPAGDTSTERTVHIDGTQEQIEAAKQLISEVTSELARR 311
Query: 351 DNHFSGTLNTAR 362
++ G N AR
Sbjct: 312 TANYPGEQNRAR 323
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 181 TQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV 221
TQ +F++ +N+KVG +IGKGG I+++Q+ +GA I V
Sbjct: 229 TQPGAETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQV 269
>gi|403279508|ref|XP_003931290.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Saimiri boliviensis boliviensis]
Length = 438
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 278 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 331
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 332 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 386
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 387 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 436
>gi|297272500|ref|XP_002800442.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Macaca mulatta]
Length = 438
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSP 247
++ VGA+IGK G I+ L A A I + P+ R++ +T PE+++
Sbjct: 270 QVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF-- 325
Query: 248 AQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
KA ++ +L E F + + + + V ++ G ++GKGG ++E++ +T
Sbjct: 326 --KAQGRIYGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLT 378
Query: 308 GTSIRIISDQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTART 363
+ + DQ END+V V+I G F + A + ++ +++ H G N A+
Sbjct: 379 AAEVVVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQA 435
Query: 364 R 364
R
Sbjct: 436 R 436
>gi|34364924|emb|CAE45883.1| hypothetical protein [Homo sapiens]
Length = 198
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 36 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP--PEAQF----KAQGRI 89
Query: 256 FSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
+ ++ E +F S K + + A + V S G ++GKGG ++E++ ++ + +
Sbjct: 90 YGKIKE------ENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVP 143
Query: 315 SDQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 144 RDQ---TPDENDQVVVKITGHF 162
>gi|114666312|ref|XP_001172661.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Pan troglodytes]
gi|397477450|ref|XP_003810083.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Pan paniscus]
Length = 438
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 278 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 331
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 332 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 386
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 387 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 436
>gi|238624257|ref|NP_001153895.1| insulin-like growth factor 2 mRNA-binding protein 1 isoform 2 [Homo
sapiens]
gi|332259444|ref|XP_003278799.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Nomascus leucogenys]
gi|390463565|ref|XP_003733060.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Callithrix jacchus]
gi|395756618|ref|XP_003780155.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Pongo abelii]
gi|402899535|ref|XP_003912750.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Papio anubis]
gi|78523098|gb|ABB46294.1| IGF2 mRNA-binding protein 1 isoform [Homo sapiens]
Length = 438
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 278 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 331
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 332 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 386
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 387 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQAR 436
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 166 PLSLESD--RVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
PLS + + + ++ Q + +I N +VG +IGK G I+ LQ+++GA I V
Sbjct: 121 PLSSQGNSHQYSSYGGGYQSGSTTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTR 180
Query: 224 TM---PECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSE--KGLDFSSNKGLLV 278
M P R + ++ + SR A++ ++ V + G+S +++ +
Sbjct: 181 DMDVQPGSQTRSVDISGTPDQISR---AEQLIIDVLAEADAGSSGTISNRKYNAPQPGAE 237
Query: 279 NARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKV 338
++ +A+N+VG ++GKGG I M+ + I++I L + +R + I G ++
Sbjct: 238 QFQMQIANNKVGLVIGKGGETIKSMQAKSQARIQVIPLHLPPGDTSTERTLYIDGTAEQI 297
Query: 339 K 339
+
Sbjct: 298 E 298
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 235 VTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLG 294
V + GP+ PAQ+AV+ + + ++ D + ++ RL+V ++++ C G
Sbjct: 150 VDSRRGPDHELFPAQEAVLHIQTHIV--------DLGPDMDNIITTRLLVPASEIACFDG 201
Query: 295 KGGTIISEMRKVTGTSIRIIS-DQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLR 350
+ G++ S++++ T +++I+ + L C E+D ++QI GE ++A+ VT +LR
Sbjct: 202 REGSL-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLR 257
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 155 SSSISYVSAVRPL---------------SLESDRVATLDA-----------RTQQQEVSF 188
SS Y RPL E+ +VAT DA R+ +E F
Sbjct: 46 SSDFGYGGQKRPLEDAGGYFPMANLDIDQPETKKVATNDAFSAMAGMGGPSRSSSEE--F 103
Query: 189 RILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPA 248
++ + VG +IG+GG I +Q E+G I + ER +T+T GP+ A
Sbjct: 104 KV--PDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPERSVTLT---GPQDSIQAA 158
Query: 249 QKAVVLVFSRLIE-GTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVT 307
++ + S ++E G + G+ V +V AS + G ++GKGG I +++
Sbjct: 159 KR----LLSEIVEKGRPAPAFHHNDGPGMTVQEIMVPAS-KAGLVIGKGGETIKSLQERA 213
Query: 308 GTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHF 354
G + +I D + D+ ++ISGE KV+ A V +R+ F
Sbjct: 214 GVKMVMIQDGPQNTGA--DKPLRISGEPFKVQQAKEMVMELIREQGF 258
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 71 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 118
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 119 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 176
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
+RVV +SGE +V AV + +++ D S LN + V SPY+ D
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 236
>gi|453088188|gb|EMF16228.1| KH domain RNA-binding protein [Mycosphaerella populorum SO2202]
Length = 369
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 168 SLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE 227
+L+ D T D Q Q ++ R + ++ + G +IGK G + L+ + G V +P
Sbjct: 26 NLQDDSPRTDDEYAQSQ-LTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPG 84
Query: 228 CDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNA-RLVVAS 286
+R++TVT + A LV L++G + G+ S + RL+++
Sbjct: 85 VHDRVLTVTGI------LNGIADAYGLVADCLVKGAPQMGIGGSVAAAPNTHPIRLLISH 138
Query: 287 NQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVT 346
NQ+G ++G+ G I +++ +G +R+++ + + S +R+V++ G ++ AV+ +
Sbjct: 139 NQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPDGIQKAVWEIG 195
Query: 347 GRLRDNHFSG 356
L D+ G
Sbjct: 196 KCLVDDEQRG 205
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Query: 195 DKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTASEGPESRYSPAQKAV 252
D VG +IG+GG+ I ++ +GA IS+ A P D ER+ T+T GP++ +KA+
Sbjct: 295 DMVGCIIGRGGSKISEIRKSSGARISI-AKAPHDDTGERMFTITG--GPQAN----EKAL 347
Query: 253 VLVFSRL 259
L++ L
Sbjct: 348 YLLYENL 354
>gi|344285915|ref|XP_003414705.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 2 [Loxodonta africana]
Length = 438
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVGA-TMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L A A I + P+ R++ +T PE+++ KA +
Sbjct: 278 VGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP--PEAQF----KAQGRI 331
Query: 256 FSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIIS 315
+ +L E F + + + + V ++ G ++GKGG ++E++ +T + +
Sbjct: 332 YGKLKEENF-----FGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 386
Query: 316 DQLLKCISENDRV-VQISGEFSKVKDA---VYNVTGRLRDNHFSGTLNTARTR 364
DQ END+V V+I G F + A + ++ +++ H G N A+ R
Sbjct: 387 DQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKGQSNQAQVR 436
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
Query: 205 GTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTS 264
G ++ ++ E+GA I++ C ER++T+T GP A+ F+ +
Sbjct: 6 GETVKKMREESGARINISEG--NCPERIVTIT---GPTD-------AIFKAFAMIAYKFE 53
Query: 265 EKGLDFSSNKGLL----VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLK 320
E ++ SN V RLVV ++Q G L+GKGG+ I E+R+ TG +++ D L
Sbjct: 54 EDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLP- 112
Query: 321 CISENDRVVQISG 333
+ +R V ISG
Sbjct: 113 --NSTERAVTISG 123
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 149 VLTTAPSSSISYVSAVRPLSLESDRVATLD--ARTQQQEVSFRILCSNDKVGAVIGKGGT 206
V T P+ +I A+ E D + ++ T + V+ R++ + G++IGKGG+
Sbjct: 32 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGS 91
Query: 207 IIRALQSEAGAFISV-GATMPECDERLITVTAS 238
I+ ++ GA + V G +P ER +T++ +
Sbjct: 92 KIKEIRESTGAQVQVAGDMLPNSTERAVTISGT 124
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 17 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 76
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 77 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 124
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 125 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 182
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
+RVV +SGE +V AV + +++ D S LN + V SPY+ D
Sbjct: 183 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 242
>gi|339242773|ref|XP_003377312.1| poly(rC)-binding protein 3 [Trichinella spiralis]
gi|316973900|gb|EFV57443.1| poly(rC)-binding protein 3 [Trichinella spiralis]
Length = 410
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 27/148 (18%)
Query: 187 SFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYS 246
+ R+L +VG++IGK S A IS G C ER++T+T S
Sbjct: 41 TIRLLMQGKEVGSIIGK---------SMAKINISDGT----CPERIVTITGSV------- 80
Query: 247 PAQKAVVLVFSRLIEGTSEKGLDF-SSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRK 305
+A+ F + + E S + RL+V + Q GCL+G+GG+ I ++R+
Sbjct: 81 ---QAIDTAFKMICKKFEEDQQQIPDSVPKPPITFRLIVPATQCGCLIGRGGSKIKDIRE 137
Query: 306 VTGTSIRIISDQLLKCISENDRVVQISG 333
TG SI++ S+ L + +R V +SG
Sbjct: 138 ATGASIQVASEMLP---NSTERAVTLSG 162
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 178 DARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTA 237
D Q ++ R + S+ + G +IGK G + L+ E G V + +R++TVT
Sbjct: 40 DEEYAQAILTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG 99
Query: 238 S-EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKG 296
+ +G YS +V L+EG + G+ RL+++ NQ+G ++G+
Sbjct: 100 ALQGCARAYS-------IVAKGLLEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTIIGRQ 152
Query: 297 GTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFSG 356
G I ++ +G +R+++ + + S +R+V++ G ++ AV+ + L D+ G
Sbjct: 153 GLKIKHIQDASG--VRMVAQKEMLPQS-TERIVEVQGTPEGIEKAVWEIGKCLIDDWQRG 209
Query: 357 T 357
T
Sbjct: 210 T 210
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGAT---MPECDERLITVTASEGPESR 244
F+IL GA+IGKGG I LQ EAGA + + + P ER+ +T S
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSV----- 94
Query: 245 YSPAQKAVVLVFSRLIEGTSEK-------GLDFSSNKGL--LVNARLVVASNQVGCLLGK 295
+ V+ + ++E EK +DF + +++V ++ G ++GK
Sbjct: 95 -----EGVLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNSTAGMIIGK 149
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNHFS 355
GG+ I ++++ +G ++I ++E R + + GE K A + ++ ++ S
Sbjct: 150 GGSYIKQIKEESGAYVQISQKSKDHALAE--RCITVIGEMDNNKKACQLILAKIVEDPQS 207
Query: 356 GT-LNTARTRSTSSVLTETSPYSRLKDPASFGVHSSV 391
G+ L+ + T V S +P+S VHS+V
Sbjct: 208 GSCLHVSYAEVTGPVANFNPTGSPYANPSS--VHSTV 242
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 183 QQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPE--CDERLITVTASEG 240
++E +IL N G +IGKGG+ I+ ++ E+GA++ + + ER ITV
Sbjct: 129 EREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCITVIGE-- 186
Query: 241 PESRYSPAQKAVVLVFSRLIE 261
+KA L+ ++++E
Sbjct: 187 ----MDNNKKACQLILAKIVE 203
>gi|89272931|emb|CAJ83219.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 376
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 179 ARTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISV-GATMPECDERLITVTA 237
+R V RIL + GAVIGKGG I+AL+++ A +SV ++ P ER+++++A
Sbjct: 10 SRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGP---ERILSISA 66
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
+ + + L E KG DF RL++ + G ++G G
Sbjct: 67 D------IETIGEILKKIIPTLEEYQHFKGNDFD------CELRLLIHQSLAGGIIGVKG 114
Query: 298 TIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAV 342
I E+R+ T T+I++ + C DRVV I G+ +V + +
Sbjct: 115 AKIKELREKTQTTIKLFQEC---CPHSTDRVVLIGGKPDRVVECI 156
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASE 239
++ ++ D G++IGKGG I+ ++ E+GA I + + D+R+IT+T ++
Sbjct: 298 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQ 351
>gi|224116388|ref|XP_002317285.1| predicted protein [Populus trichocarpa]
gi|222860350|gb|EEE97897.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 278 VNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSK 337
V RL+V S +GC++GKGG+ I+E+RK T +RI C ND +V++ GE S
Sbjct: 21 VGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRISKGAKPNCADSNDELVEVVGEVSS 80
Query: 338 VKDAVYNVTGRLRDNHF---SGTLNT 360
V+DA+ + RLRD+ G LN+
Sbjct: 81 VRDALVQIVLRLRDDVLKEKDGGLNS 106
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 71 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 118
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 119 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 176
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
+RVV +SGE +V AV + +++ D S LN + V SPY+ D
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 236
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 71 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 118
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 119 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 176
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
+RVV +SGE +V AV + +++ D S LN + V SPY+ D
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 236
>gi|148709317|gb|EDL41263.1| mCG6893, isoform CRA_b [Mus musculus]
gi|148709318|gb|EDL41264.1| mCG6893, isoform CRA_b [Mus musculus]
Length = 368
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 152 TAPSSSISYVSAVRPLSLESDRVATLDARTQQQEVSFRILCSNDKVGAVIGKGGTIIRAL 211
T P++ + RP + A +R + V RIL + GAVIGKGG I+AL
Sbjct: 9 TFPNTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKAL 68
Query: 212 QSEAGAFISV-GATMPECDERLITVTAS----------------EGPESRYSPAQKAVVL 254
+++ A +SV ++ P ER+++++A EG + SP + +
Sbjct: 69 RTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEGLQLP-SPTATSQLP 124
Query: 255 VFSRLIEGTS---EKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSI 311
+ S +E + KG DF RL++ + G ++G G I E+R+ T T+I
Sbjct: 125 LESDAVECLNYQHYKGSDFD------CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTI 178
Query: 312 RIISDQLLKCISENDRVVQISGEFSKVKDAV 342
++ + C DRVV I G+ +V + +
Sbjct: 179 KLFQEC---CPHSTDRVVLIGGKPDRVVECI 206
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 165 RPLSLESDRVATLDARTQQQ-EVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGA 223
RPL + V T + T ++ E ++L + G++IGKGG I LQ E GA I +
Sbjct: 11 RPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 70
Query: 224 T---MPECDERLITVTASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVN- 279
+ P ER+ V + +A+ V S + E E + + K +VN
Sbjct: 71 SKDFYPGTTERVCLVQGTA----------EALNAVHSFIAEKVRE--IPQAMTKPEVVNI 118
Query: 280 --------------ARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLLKCISEN 325
A+L+V ++ G ++GKGG + + + +G +++ Q + I+
Sbjct: 119 LQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQ 176
Query: 326 DRVVQISGEFSKVKDAVYNVTGRLR-DNHFSGTLNTARTRSTSSVLTET---SPYSRLKD 381
+RVV +SGE +V AV + +++ D S LN + V SPY+ D
Sbjct: 177 ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPAD 236
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 17/257 (6%)
Query: 123 QHRLFGAVSQEILPDLHVDILSQRNSVLTTAPSSSISYVSAVRPLSLESDRVATLDARTQ 182
QH LFG + DI NS PS Y RPL D L A
Sbjct: 4 QHFLFGVWINRTIAAKIGDIPHLNNSTTLVDPSV-YGYGVQKRPLD---DGGNQLGALVH 59
Query: 183 QQEVSFRILCSNDK-VGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGP 241
Q+ V DK VG +IG+GG I +Q E+G I + ER +T + P
Sbjct: 60 QRAVITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGT--P 117
Query: 242 ESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGTIIS 301
ES A++ + + R G D N + +++ +++VG ++GKGG I
Sbjct: 118 ES-IEQAKRLLGQIVDRCRNGPGFHN-DVDGNSTI---QEILIPASKVGLVIGKGGETIK 172
Query: 302 EMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDN---HFSGTL 358
++++ TG + +I D + + D+ ++I+G+ KV+ A V +R+ F G
Sbjct: 173 QLQERTGVKMIMIQDGPMPTGA--DKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVR 230
Query: 359 NTARTRSTSSVLTETSP 375
N +R + + P
Sbjct: 231 NDFSSRMGGGSIEVSVP 247
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 188 FRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRYSP 247
+R++ KVG++IG+ G +I+ + E A I + P +R++ ++ E PE+ SP
Sbjct: 29 YRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKEEPEAALSP 88
Query: 248 AQKAVVLVFSRL---------IEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
A AV+ VF R+ G++ G FSS RL+VAS+Q L+GK G+
Sbjct: 89 AIDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSS-------VRLLVASSQAINLIGKQGS 141
Query: 299 IIS---EMRKVTGTSIRII 314
I E R+ +S I
Sbjct: 142 TIKSILESRRCASSSCYIF 160
>gi|67971394|dbj|BAE02039.1| unnamed protein product [Macaca fascicularis]
Length = 316
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 18/142 (12%)
Query: 197 VGAVIGKGGTIIRALQSEAGAFISVG-ATMPECDERLITVTASEGPESRYSPAQKAVVLV 255
VGA+IGK G I+ L AGA I + A P+ R++ +T PE+++ KA +
Sbjct: 154 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGP--PEAQF----KAQGRI 207
Query: 256 FSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRII 314
+ ++ E +F S K + + A + V S G ++GKGG ++E++ ++ + +
Sbjct: 208 YGKIKEE------NFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVP 261
Query: 315 SDQLLKCISENDR-VVQISGEF 335
DQ END+ VV+I+G F
Sbjct: 262 RDQ---TPDENDQVVVKITGHF 280
>gi|332027896|gb|EGI67951.1| Heterogeneous nuclear ribonucleoprotein K [Acromyrmex echinatior]
Length = 172
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 180 RTQQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECD--ERLITVTA 237
R +Q + R+L + G++IGKGG I L+S+ A I V P+C ER++T++
Sbjct: 22 RYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV----PDCPGPERVLTIS- 76
Query: 238 SEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGG 297
S+ P V+ V + ++ E G S++ ++ R++V +Q GC++GK G
Sbjct: 77 SDLP---------TVLQVLNEVVPNLEENGSRHGSDE---IDVRMLVHQSQAGCIIGKAG 124
Query: 298 TIISEMRKVT 307
I E+R+V+
Sbjct: 125 LKIKELREVS 134
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 18/170 (10%)
Query: 184 QEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVG-----ATMPECDERLITVTAS 238
QE ++ + N+ VGA+IG G+ IR++ + A + + + + ER +T+ +
Sbjct: 302 QETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 239 EGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGKGGT 298
PE ++ KA ++F ++ E G D + + L+VAS+QVG ++GKGG
Sbjct: 361 --PEGQW----KAQYMIFEKMREEGFMCGTD-----DVRLTVELLVASSQVGRIIGKGGQ 409
Query: 299 IISEMRKVTGTSIRIISDQLLKCISENDRV-VQISGEFSKVKDAVYNVTG 347
+ E+++VTG+ I++ L ++ V I G F V+ + G
Sbjct: 410 NVRELQRVTGSVIKLPEHALAPPAGGDEETPVHIIGPFYSVQMVAIFIEG 459
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 182 QQQEVSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFI------SVGATMPECDERLITV 235
+Q + RIL ++ VGA+IG+ G+ IR + ++ A + +VG+ E+ IT+
Sbjct: 81 RQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-----EKSITI 135
Query: 236 TASEGPESRYSPAQKAVVLVFSRLIEGTSEKGLDFSSNKGLLVNARLVVASNQVGCLLGK 295
+ PE+ + + R++E ++ L S+NKG + +++ +N +G ++GK
Sbjct: 136 YGN--PENCTNACK--------RILEVMQQEAL--STNKGEIC-LKILAHNNLIGRIIGK 182
Query: 296 GGTIISEMRKVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNVTGRLRDNH 353
G I + + T T I + S + + +R++ + G + A ++ +LR ++
Sbjct: 183 SGNTIKRIMQDTDTKITVSSINDINSFNL-ERIITVKGLIENMSRAENQISTKLRQSY 239
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 49/207 (23%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATM-PECDERLITVTA------- 237
V+ + + N ++G+VIGKGG I+ +Q +GA ++ M P ER+++V+
Sbjct: 203 VTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHI 262
Query: 238 -----------------SEGPESRYSPAQKA---------VVLVFSRLIEGTSEKGLDFS 271
S S Y P+ + V +S G+S
Sbjct: 263 ATYYIGNILIEANERLPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSHGPPQ-- 320
Query: 272 SNKGLLVNARLVVASNQVGCLLGKGGTIISEMRKVTGTSIRIISDQLL---------KCI 322
L ++ + ++ VGC++GKGG+ I+E+R ++ ++I+I+ +
Sbjct: 321 ----QLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPAG 376
Query: 323 SENDRVVQISGEFSKVKDAVYNVTGRL 349
E +R+V I+G+ + ++ AV + RL
Sbjct: 377 GEGERLVVITGQPANIQMAVQLLYHRL 403
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 186 VSFRILCSNDKVGAVIGKGGTIIRALQSEAGAFISVGATMPECDERLITVTASEGPESRY 245
+ R L +IGKGG+ + ++ ++ A + V ++P ER++ V+ GP
Sbjct: 120 IHMRCLIVTQDASIIIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVS---GP---- 172
Query: 246 SPAQKAVVLVFSRLIEGTSEKGLDFSSNKG-LLVNARLVVASNQVGCLLGKGGTIISEMR 304
AV F ++ +++ D S G V + ++ ++++G ++GKGG I E++
Sbjct: 173 ---LDAVSKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQ 229
Query: 305 KVTGTSIRIISDQLLKCISENDRVVQISGEFSKVKDAVYNV 345
+G + S+ +L +E RV+ +SG + A Y +
Sbjct: 230 DASGARLN-ASEGMLPGSTE--RVLSVSGVADAIHIATYYI 267
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,112,894,117
Number of Sequences: 23463169
Number of extensions: 237236823
Number of successful extensions: 702236
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 1584
Number of HSP's that attempted gapping in prelim test: 690102
Number of HSP's gapped (non-prelim): 9092
length of query: 428
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 283
effective length of database: 8,957,035,862
effective search space: 2534841148946
effective search space used: 2534841148946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)