Query 014256
Match_columns 428
No_of_seqs 408 out of 2054
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 08:18:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 7.9E-20 2.7E-24 152.9 15.0 119 64-184 5-124 (126)
2 3vtx_A MAMA; tetratricopeptide 99.8 2.1E-19 7.1E-24 158.7 14.7 158 40-199 6-175 (184)
3 2pl2_A Hypothetical conserved 99.8 3.5E-19 1.2E-23 162.8 14.3 162 40-204 6-190 (217)
4 4gyw_A UDP-N-acetylglucosamine 99.8 1.7E-19 5.9E-24 193.2 13.3 162 35-198 5-178 (723)
5 4ga2_A E3 SUMO-protein ligase 99.8 2E-19 6.7E-24 155.0 11.2 138 44-183 2-142 (150)
6 2h6f_A Protein farnesyltransfe 99.8 7.2E-19 2.5E-23 175.1 13.1 169 36-206 94-281 (382)
7 2pl2_A Hypothetical conserved 99.8 3.7E-18 1.3E-22 155.9 13.2 146 35-183 35-193 (217)
8 3gyz_A Chaperone protein IPGC; 99.8 8.4E-18 2.9E-22 145.4 13.7 115 59-175 23-138 (151)
9 4i17_A Hypothetical protein; T 99.8 1.3E-17 4.4E-22 152.4 15.7 136 40-177 8-155 (228)
10 2vgx_A Chaperone SYCD; alterna 99.7 1.5E-17 5.1E-22 142.9 12.3 131 57-189 6-137 (148)
11 2hr2_A Hypothetical protein; a 99.7 1.3E-17 4.5E-22 144.1 10.7 117 73-189 10-150 (159)
12 3rkv_A Putative peptidylprolyl 99.7 1.9E-16 6.5E-21 137.2 15.6 118 72-189 9-146 (162)
13 4gcn_A Protein STI-1; structur 99.7 1.6E-16 5.4E-21 132.8 14.1 109 73-182 7-123 (127)
14 2xcb_A PCRH, regulatory protei 99.7 1E-16 3.5E-21 136.1 12.7 129 59-189 5-134 (142)
15 3vtx_A MAMA; tetratricopeptide 99.7 9.5E-17 3.3E-21 141.4 12.6 140 35-176 35-176 (184)
16 3upv_A Heat shock protein STI1 99.7 4.3E-16 1.5E-20 128.8 15.6 113 74-186 4-123 (126)
17 4abn_A Tetratricopeptide repea 99.7 7.8E-17 2.7E-21 164.8 12.0 162 37-200 100-293 (474)
18 3qky_A Outer membrane assembly 99.7 5.4E-16 1.8E-20 144.8 15.4 161 40-200 16-230 (261)
19 3urz_A Uncharacterized protein 99.7 9E-17 3.1E-21 145.7 9.6 148 50-199 16-191 (208)
20 4i17_A Hypothetical protein; T 99.7 1.6E-16 5.6E-21 145.0 11.1 142 40-183 43-222 (228)
21 4gco_A Protein STI-1; structur 99.7 1.2E-16 4.2E-21 133.4 8.7 116 34-151 8-125 (126)
22 4gyw_A UDP-N-acetylglucosamine 99.7 3.6E-16 1.2E-20 167.5 14.6 132 68-201 5-147 (723)
23 2h6f_A Protein farnesyltransfe 99.7 1.4E-16 4.8E-21 158.5 10.6 149 34-184 126-283 (382)
24 2q7f_A YRRB protein; TPR, prot 99.7 7.3E-16 2.5E-20 140.7 13.9 161 40-202 58-230 (243)
25 1w3b_A UDP-N-acetylglucosamine 99.7 6.4E-16 2.2E-20 152.3 14.1 164 35-200 165-340 (388)
26 3as5_A MAMA; tetratricopeptide 99.7 1.2E-15 4.1E-20 132.6 14.1 155 43-199 12-178 (186)
27 2e2e_A Formate-dependent nitri 99.7 2.5E-15 8.6E-20 131.7 16.0 127 49-177 21-151 (177)
28 1w3b_A UDP-N-acetylglucosamine 99.6 6.3E-16 2.2E-20 152.3 12.8 165 35-201 131-307 (388)
29 2q7f_A YRRB protein; TPR, prot 99.6 2.6E-15 8.8E-20 137.1 15.9 158 41-200 25-194 (243)
30 3sz7_A HSC70 cochaperone (SGT) 99.6 4E-15 1.4E-19 129.1 16.3 106 72-177 9-115 (164)
31 3uq3_A Heat shock protein STI1 99.6 9.5E-16 3.2E-20 140.9 12.5 158 39-196 38-238 (258)
32 2vq2_A PILW, putative fimbrial 99.6 2.3E-15 7.9E-20 135.3 14.4 154 41-196 10-178 (225)
33 1p5q_A FKBP52, FK506-binding p 99.6 5.4E-16 1.9E-20 151.5 10.8 135 50-186 125-275 (336)
34 3u4t_A TPR repeat-containing p 99.6 2.4E-15 8.3E-20 140.0 14.5 155 45-201 9-178 (272)
35 4ga2_A E3 SUMO-protein ligase 99.6 2.4E-16 8.2E-21 135.5 6.9 125 79-203 2-138 (150)
36 2ho1_A Type 4 fimbrial biogene 99.6 3.6E-15 1.2E-19 137.4 15.3 156 41-198 73-242 (252)
37 4eqf_A PEX5-related protein; a 99.6 2E-15 6.7E-20 147.4 14.1 149 50-200 77-282 (365)
38 4abn_A Tetratricopeptide repea 99.6 1.6E-15 5.5E-20 155.1 13.4 147 39-188 137-305 (474)
39 2ho1_A Type 4 fimbrial biogene 99.6 5.6E-15 1.9E-19 136.1 15.1 158 40-199 38-209 (252)
40 1xnf_A Lipoprotein NLPI; TPR, 99.6 1.4E-14 4.9E-19 134.6 17.5 147 50-196 17-175 (275)
41 2vsy_A XCC0866; transferase, g 99.6 5.9E-15 2E-19 153.8 16.5 144 52-197 3-160 (568)
42 4eqf_A PEX5-related protein; a 99.6 4.9E-15 1.7E-19 144.6 14.3 158 39-198 99-314 (365)
43 2vq2_A PILW, putative fimbrial 99.6 7.4E-15 2.5E-19 132.0 14.4 161 37-199 40-216 (225)
44 2fbn_A 70 kDa peptidylprolyl i 99.6 4E-15 1.4E-19 133.2 12.3 140 50-191 16-172 (198)
45 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 8.5E-16 2.9E-20 156.4 8.8 138 50-189 246-399 (457)
46 2pzi_A Probable serine/threoni 99.6 1.3E-15 4.5E-20 162.7 10.6 155 49-206 402-575 (681)
47 2pzi_A Probable serine/threoni 99.6 7.8E-16 2.7E-20 164.4 8.4 147 36-185 430-578 (681)
48 3hym_B Cell division cycle pro 99.6 3.2E-15 1.1E-19 142.5 11.5 164 35-200 86-271 (330)
49 1fch_A Peroxisomal targeting s 99.6 1.3E-14 4.3E-19 141.1 15.8 156 43-200 68-286 (368)
50 3uq3_A Heat shock protein STI1 99.6 5.2E-15 1.8E-19 135.9 12.3 143 40-184 80-256 (258)
51 3q49_B STIP1 homology and U bo 99.6 3.5E-14 1.2E-18 118.3 15.6 113 74-186 9-127 (137)
52 3mkr_A Coatomer subunit epsilo 99.6 2.1E-14 7.2E-19 137.3 15.8 129 50-178 142-272 (291)
53 3hym_B Cell division cycle pro 99.6 1.1E-14 3.6E-19 138.9 13.6 158 36-195 53-223 (330)
54 1hxi_A PEX5, peroxisome target 99.6 1.4E-14 4.7E-19 119.9 11.8 100 77-176 20-120 (121)
55 1hh8_A P67PHOX, NCF-2, neutrop 99.6 2.2E-14 7.4E-19 129.0 14.1 126 46-176 13-156 (213)
56 1fch_A Peroxisomal targeting s 99.6 1.9E-14 6.3E-19 139.9 14.5 160 38-197 24-213 (368)
57 3ieg_A DNAJ homolog subfamily 99.6 2.4E-14 8.3E-19 137.6 15.1 162 37-200 35-223 (359)
58 3ieg_A DNAJ homolog subfamily 99.6 1.6E-14 5.5E-19 138.9 13.7 156 44-201 8-190 (359)
59 2yhc_A BAMD, UPF0169 lipoprote 99.6 1.1E-14 3.7E-19 133.4 11.9 127 50-176 16-182 (225)
60 2fo7_A Synthetic consensus TPR 99.6 2.3E-14 7.8E-19 117.4 11.7 128 45-174 7-136 (136)
61 1elw_A TPR1-domain of HOP; HOP 99.6 1.8E-13 6.1E-18 109.8 16.8 112 74-185 4-116 (118)
62 3u4t_A TPR repeat-containing p 99.6 8.1E-15 2.8E-19 136.4 9.7 140 38-177 36-178 (272)
63 3as5_A MAMA; tetratricopeptide 99.5 3.2E-14 1.1E-18 123.4 12.2 135 39-175 42-178 (186)
64 3qky_A Outer membrane assembly 99.5 3E-14 1E-18 132.9 12.3 141 39-179 52-233 (261)
65 1a17_A Serine/threonine protei 99.5 3.7E-13 1.3E-17 115.3 18.2 112 73-184 12-124 (166)
66 2dba_A Smooth muscle cell asso 99.5 2.2E-13 7.4E-18 114.4 16.3 111 74-184 28-142 (148)
67 1xnf_A Lipoprotein NLPI; TPR, 99.5 5.2E-14 1.8E-18 130.8 13.6 161 37-200 41-250 (275)
68 2y4t_A DNAJ homolog subfamily 99.5 6.2E-14 2.1E-18 140.2 14.9 160 40-201 178-365 (450)
69 3urz_A Uncharacterized protein 99.5 1.2E-13 4.2E-18 124.9 15.2 111 75-185 5-132 (208)
70 3mkr_A Coatomer subunit epsilo 99.5 1.1E-13 3.6E-18 132.4 15.1 154 40-200 102-270 (291)
71 3qou_A Protein YBBN; thioredox 99.5 2.3E-14 8E-19 136.5 10.1 143 40-184 118-264 (287)
72 2lni_A Stress-induced-phosphop 99.5 2.5E-13 8.6E-18 111.7 15.1 113 73-185 15-128 (133)
73 2y4t_A DNAJ homolog subfamily 99.5 4.4E-14 1.5E-18 141.3 12.5 158 40-199 27-211 (450)
74 3fp2_A TPR repeat-containing p 99.5 3.9E-14 1.3E-18 144.8 12.0 156 43-200 280-463 (537)
75 2xpi_A Anaphase-promoting comp 99.5 1E-13 3.4E-18 144.0 14.9 129 40-170 374-504 (597)
76 3cv0_A Peroxisome targeting si 99.5 5.6E-14 1.9E-18 133.7 11.6 122 50-173 150-272 (327)
77 1qqe_A Vesicular transport pro 99.5 8.9E-15 3E-19 139.6 5.7 153 46-198 44-232 (292)
78 1ihg_A Cyclophilin 40; ppiase 99.5 3E-13 1E-17 133.8 16.8 116 74-189 223-355 (370)
79 3cv0_A Peroxisome targeting si 99.5 5.4E-14 1.9E-18 133.7 11.0 158 38-197 54-272 (327)
80 2vyi_A SGTA protein; chaperone 99.5 8.1E-13 2.8E-17 107.8 16.6 113 74-186 12-125 (131)
81 1qqe_A Vesicular transport pro 99.5 2.3E-14 7.9E-19 136.7 8.0 139 40-178 78-236 (292)
82 2xev_A YBGF; tetratricopeptide 99.5 7.7E-13 2.6E-17 108.8 16.1 103 77-179 5-114 (129)
83 3gyz_A Chaperone protein IPGC; 99.5 2.9E-14 1E-18 123.0 7.6 113 87-199 15-138 (151)
84 1p5q_A FKBP52, FK506-binding p 99.5 4.9E-14 1.7E-18 137.5 10.1 131 38-168 146-292 (336)
85 1elr_A TPR2A-domain of HOP; HO 99.5 7.8E-13 2.7E-17 108.0 15.7 115 74-189 4-126 (131)
86 2kck_A TPR repeat; tetratricop 99.5 2.1E-13 7.1E-18 108.5 11.6 105 68-174 2-110 (112)
87 3fp2_A TPR repeat-containing p 99.5 6.4E-14 2.2E-18 143.2 10.8 155 41-198 245-411 (537)
88 2c2l_A CHIP, carboxy terminus 99.5 4.2E-14 1.4E-18 134.4 8.7 100 75-174 5-105 (281)
89 2vsy_A XCC0866; transferase, g 99.5 1.4E-13 4.8E-18 143.4 13.4 139 36-176 20-163 (568)
90 1a17_A Serine/threonine protei 99.5 1.5E-13 5.1E-18 117.8 11.3 127 42-170 16-146 (166)
91 2gw1_A Mitochondrial precursor 99.5 7.4E-14 2.5E-18 141.6 10.6 134 39-174 270-405 (514)
92 2if4_A ATFKBP42; FKBP-like, al 99.5 4.1E-14 1.4E-18 138.2 8.2 112 73-184 178-307 (338)
93 2r5s_A Uncharacterized protein 99.5 8.7E-14 3E-18 122.2 9.5 123 50-174 18-141 (176)
94 2xpi_A Anaphase-promoting comp 99.5 2.7E-13 9.3E-18 140.7 14.1 158 36-195 336-505 (597)
95 3upv_A Heat shock protein STI1 99.5 1.3E-13 4.4E-18 113.8 9.0 111 42-154 7-125 (126)
96 1hh8_A P67PHOX, NCF-2, neutrop 99.5 5.7E-13 1.9E-17 119.6 14.0 124 73-198 5-154 (213)
97 1zu2_A Mitochondrial import re 99.5 3.7E-13 1.3E-17 116.0 11.5 95 85-179 13-129 (158)
98 1na0_A Designed protein CTPR3; 99.5 4.8E-12 1.6E-16 102.2 17.4 112 74-185 9-121 (125)
99 2fo7_A Synthetic consensus TPR 99.5 2E-12 6.9E-17 105.6 15.3 121 76-196 3-134 (136)
100 4g1t_A Interferon-induced prot 99.4 2E-13 7E-18 137.6 11.0 163 40-202 52-250 (472)
101 1wao_1 Serine/threonine protei 99.4 7.4E-14 2.5E-18 142.9 7.5 133 40-174 7-154 (477)
102 2lni_A Stress-induced-phosphop 99.4 3.3E-13 1.1E-17 110.9 9.9 118 37-156 14-133 (133)
103 3sz7_A HSC70 cochaperone (SGT) 99.4 1.7E-13 5.7E-18 118.7 8.1 110 40-151 12-123 (164)
104 3edt_B KLC 2, kinesin light ch 99.4 1.9E-13 6.3E-18 126.8 8.6 135 37-171 41-199 (283)
105 2ond_A Cleavage stimulation fa 99.4 9.9E-13 3.4E-17 126.1 13.7 123 53-177 79-205 (308)
106 2vyi_A SGTA protein; chaperone 99.4 3.8E-13 1.3E-17 109.8 8.8 116 40-157 13-130 (131)
107 2ond_A Cleavage stimulation fa 99.4 2.6E-12 9E-17 123.1 16.1 161 36-198 96-274 (308)
108 3edt_B KLC 2, kinesin light ch 99.4 8.6E-13 3E-17 122.3 12.0 147 50-196 13-200 (283)
109 3k9i_A BH0479 protein; putativ 99.4 5.7E-13 1.9E-17 108.8 9.2 93 86-178 2-98 (117)
110 3dra_A Protein farnesyltransfe 99.4 1.9E-12 6.5E-17 124.5 14.4 165 40-206 34-227 (306)
111 2yhc_A BAMD, UPF0169 lipoprote 99.4 1.2E-12 4E-17 119.7 12.1 136 40-175 42-218 (225)
112 2xcb_A PCRH, regulatory protei 99.4 1.8E-13 6.2E-18 115.8 6.0 114 40-155 19-134 (142)
113 4gcn_A Protein STI-1; structur 99.4 4.1E-13 1.4E-17 111.8 7.7 102 40-144 9-119 (127)
114 3rkv_A Putative peptidylprolyl 99.4 2.2E-13 7.6E-18 117.7 6.2 114 42-157 14-148 (162)
115 2vgx_A Chaperone SYCD; alterna 99.4 5.9E-13 2E-17 114.0 8.9 108 93-200 6-124 (148)
116 2fbn_A 70 kDa peptidylprolyl i 99.4 6.3E-13 2.2E-17 118.7 9.2 127 43-169 42-185 (198)
117 2gw1_A Mitochondrial precursor 99.4 1.2E-12 3.9E-17 132.8 12.1 163 36-200 301-484 (514)
118 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 4.2E-13 1.4E-17 136.5 8.4 125 39-163 268-407 (457)
119 2c2l_A CHIP, carboxy terminus 99.4 4.9E-13 1.7E-17 127.0 8.2 140 41-182 6-176 (281)
120 1dce_A Protein (RAB geranylger 99.4 4.6E-12 1.6E-16 132.3 16.0 153 50-204 40-231 (567)
121 3nf1_A KLC 1, kinesin light ch 99.4 6.2E-13 2.1E-17 125.4 8.4 134 38-171 68-225 (311)
122 4g1t_A Interferon-induced prot 99.4 2.6E-12 8.9E-17 129.4 13.3 148 50-199 225-406 (472)
123 2if4_A ATFKBP42; FKBP-like, al 99.4 1.8E-13 6.2E-18 133.6 4.5 136 41-176 181-334 (338)
124 3k9i_A BH0479 protein; putativ 99.4 1.2E-12 4.1E-17 106.9 8.8 100 51-152 3-106 (117)
125 3dss_A Geranylgeranyl transfer 99.4 1.7E-11 5.8E-16 118.8 17.3 152 50-203 41-231 (331)
126 2ifu_A Gamma-SNAP; membrane fu 99.4 2.1E-13 7.1E-18 131.0 3.7 163 35-199 29-228 (307)
127 2hr2_A Hypothetical protein; a 99.4 6E-13 2.1E-17 114.9 6.1 101 45-145 17-140 (159)
128 3nf1_A KLC 1, kinesin light ch 99.4 9.4E-13 3.2E-17 124.2 7.7 160 36-197 24-227 (311)
129 1wao_1 Serine/threonine protei 99.3 1.4E-12 4.8E-17 133.4 9.6 114 76-189 8-122 (477)
130 3ulq_A Response regulator aspa 99.3 2.4E-12 8.2E-17 126.8 10.5 151 45-195 109-294 (383)
131 1hxi_A PEX5, peroxisome target 99.3 2E-12 6.9E-17 106.7 7.7 91 50-142 29-120 (121)
132 1ouv_A Conserved hypothetical 99.3 1.1E-11 3.6E-16 116.0 13.7 150 39-195 6-180 (273)
133 1elw_A TPR1-domain of HOP; HOP 99.3 6.1E-12 2.1E-16 100.6 10.4 107 44-152 9-117 (118)
134 1na0_A Designed protein CTPR3; 99.3 6.7E-12 2.3E-16 101.3 10.6 114 40-155 10-125 (125)
135 2l6j_A TPR repeat-containing p 99.3 1.6E-12 5.5E-17 103.8 6.1 93 74-166 4-103 (111)
136 3q7a_A Farnesyltransferase alp 99.3 1.9E-11 6.4E-16 119.2 14.2 166 37-204 52-247 (349)
137 3q49_B STIP1 homology and U bo 99.3 2.6E-12 8.9E-17 106.8 7.1 114 40-155 10-130 (137)
138 3u3w_A Transcriptional activat 99.3 7.7E-12 2.6E-16 118.9 11.0 151 45-195 82-267 (293)
139 2r5s_A Uncharacterized protein 99.3 4E-12 1.4E-16 111.5 8.3 132 35-169 36-172 (176)
140 2e2e_A Formate-dependent nitri 99.3 4.1E-12 1.4E-16 111.0 8.3 118 82-199 18-149 (177)
141 1zu2_A Mitochondrial import re 99.3 4E-12 1.4E-16 109.5 7.5 90 50-141 14-125 (158)
142 2dba_A Smooth muscle cell asso 99.3 1.1E-11 3.7E-16 103.8 9.7 115 39-153 28-145 (148)
143 3ulq_A Response regulator aspa 99.3 8.9E-12 3.1E-16 122.7 10.7 131 42-172 146-295 (383)
144 1ihg_A Cyclophilin 40; ppiase 99.3 4.6E-12 1.6E-16 125.3 8.3 120 42-163 226-363 (370)
145 1ouv_A Conserved hypothetical 99.3 2.6E-11 8.8E-16 113.4 12.9 115 51-172 91-217 (273)
146 3dss_A Geranylgeranyl transfer 99.3 8.9E-11 3E-15 113.8 16.8 143 54-198 90-271 (331)
147 3u3w_A Transcriptional activat 99.3 2.5E-11 8.5E-16 115.3 12.6 126 45-170 121-266 (293)
148 2ifu_A Gamma-SNAP; membrane fu 99.3 5.7E-12 1.9E-16 120.9 8.2 134 41-176 78-229 (307)
149 3qou_A Protein YBBN; thioredox 99.3 6.9E-12 2.4E-16 119.3 8.4 133 35-169 147-283 (287)
150 2kat_A Uncharacterized protein 99.3 8E-11 2.8E-15 95.3 13.6 98 92-189 3-103 (115)
151 3q15_A PSP28, response regulat 99.2 2.3E-11 7.9E-16 119.7 11.4 120 50-169 113-250 (378)
152 2xev_A YBGF; tetratricopeptide 99.2 2.9E-11 1E-15 99.2 10.2 107 50-156 14-125 (129)
153 3dra_A Protein farnesyltransfe 99.2 4.8E-11 1.6E-15 114.7 13.0 152 34-187 62-232 (306)
154 3q15_A PSP28, response regulat 99.2 1.8E-11 6.3E-16 120.4 10.1 128 46-173 148-293 (378)
155 4a1s_A PINS, partner of inscut 99.2 4.4E-12 1.5E-16 125.2 5.7 155 43-197 52-255 (411)
156 2qfc_A PLCR protein; TPR, HTH, 99.2 3.7E-11 1.3E-15 114.1 11.6 122 50-171 127-267 (293)
157 3sf4_A G-protein-signaling mod 99.2 1.2E-11 4.1E-16 121.1 7.4 155 43-197 13-219 (406)
158 3gw4_A Uncharacterized protein 99.2 3.5E-11 1.2E-15 106.4 9.8 144 50-195 4-177 (203)
159 2qfc_A PLCR protein; TPR, HTH, 99.2 1.4E-10 4.8E-15 110.1 14.5 147 49-195 86-267 (293)
160 1dce_A Protein (RAB geranylger 99.2 3.1E-11 1E-15 126.0 10.4 129 54-184 89-235 (567)
161 4f3v_A ESX-1 secretion system 99.2 4.1E-11 1.4E-15 113.2 10.3 128 47-178 110-244 (282)
162 3ro3_A PINS homolog, G-protein 99.2 2.9E-11 9.8E-16 101.9 8.1 133 41-173 11-161 (164)
163 2kat_A Uncharacterized protein 99.2 1.3E-10 4.4E-15 94.0 11.5 100 55-156 2-104 (115)
164 2ooe_A Cleavage stimulation fa 99.2 1.1E-10 3.7E-15 120.3 13.8 158 37-196 270-456 (530)
165 3rjv_A Putative SEL1 repeat pr 99.2 3.4E-11 1.2E-15 109.1 8.8 152 37-195 16-198 (212)
166 4a1s_A PINS, partner of inscut 99.2 3.5E-12 1.2E-16 125.9 2.1 158 41-198 168-376 (411)
167 3sf4_A G-protein-signaling mod 99.2 8E-12 2.7E-16 122.3 4.6 153 43-195 91-297 (406)
168 3ro2_A PINS homolog, G-protein 99.2 2.5E-11 8.6E-16 114.8 7.9 151 46-196 12-214 (338)
169 1elr_A TPR2A-domain of HOP; HO 99.2 2.7E-11 9.2E-16 98.7 6.6 111 43-156 8-127 (131)
170 1na3_A Designed protein CTPR2; 99.2 3.5E-10 1.2E-14 86.6 11.9 82 74-155 9-91 (91)
171 2kc7_A BFR218_protein; tetratr 99.1 1.6E-10 5.6E-15 90.6 9.2 87 111-197 4-93 (99)
172 3gw4_A Uncharacterized protein 99.1 7.8E-11 2.7E-15 104.2 8.2 134 39-172 26-178 (203)
173 2kck_A TPR repeat; tetratricop 99.1 1.2E-10 4.1E-15 92.2 8.2 102 37-140 4-110 (112)
174 2kc7_A BFR218_protein; tetratr 99.1 8.7E-11 3E-15 92.2 6.9 89 78-174 4-94 (99)
175 3ro2_A PINS homolog, G-protein 99.1 2.9E-11 1E-15 114.3 4.6 128 45-172 89-254 (338)
176 2ooe_A Cleavage stimulation fa 99.1 4.1E-10 1.4E-14 116.0 13.3 143 56-200 256-426 (530)
177 3q7a_A Farnesyltransferase alp 99.1 4.1E-10 1.4E-14 109.6 12.5 149 35-185 84-252 (349)
178 4f3v_A ESX-1 secretion system 99.1 6E-10 2E-14 105.3 11.9 119 79-197 107-240 (282)
179 3rjv_A Putative SEL1 repeat pr 99.1 1.5E-09 5E-14 98.3 13.7 139 37-182 48-207 (212)
180 3ro3_A PINS homolog, G-protein 99.1 4.8E-10 1.7E-14 94.2 9.8 123 73-195 8-159 (164)
181 3ma5_A Tetratricopeptide repea 99.0 1.8E-09 6.1E-14 85.4 10.4 71 104-174 3-74 (100)
182 1na3_A Designed protein CTPR2; 99.0 5.6E-09 1.9E-13 79.7 12.8 79 107-185 9-87 (91)
183 1hz4_A MALT regulatory protein 99.0 2.9E-09 9.9E-14 103.9 13.1 145 50-194 26-203 (373)
184 2l6j_A TPR repeat-containing p 99.0 4.8E-09 1.6E-13 83.2 12.0 68 107-174 4-71 (111)
185 3ma5_A Tetratricopeptide repea 99.0 2.4E-09 8.3E-14 84.7 9.1 87 68-156 3-92 (100)
186 2xm6_A Protein corresponding t 98.9 3.4E-08 1.2E-12 100.5 15.8 136 51-195 272-433 (490)
187 3n71_A Histone lysine methyltr 98.9 7.3E-09 2.5E-13 105.9 10.5 119 50-168 321-462 (490)
188 1klx_A Cysteine rich protein B 98.8 3.8E-08 1.3E-12 82.8 12.3 111 52-171 9-127 (138)
189 2xm6_A Protein corresponding t 98.8 2.5E-08 8.7E-13 101.5 13.4 150 37-195 217-397 (490)
190 1hz4_A MALT regulatory protein 98.8 7.5E-09 2.6E-13 100.9 8.8 132 41-172 55-205 (373)
191 3n71_A Histone lysine methyltr 98.8 5.8E-08 2E-12 99.2 14.3 101 77-177 312-434 (490)
192 3e4b_A ALGK; tetratricopeptide 98.7 1.7E-08 5.7E-13 102.2 9.0 126 41-177 178-320 (452)
193 3mv2_B Coatomer subunit epsilo 98.7 6.7E-08 2.3E-12 92.4 11.8 136 57-194 85-240 (310)
194 1pc2_A Mitochondria fission pr 98.7 1.2E-07 4.2E-12 80.6 11.7 94 89-182 13-112 (152)
195 3mv2_B Coatomer subunit epsilo 98.7 9.7E-08 3.3E-12 91.3 12.0 155 41-200 102-288 (310)
196 4b4t_Q 26S proteasome regulato 98.7 8.7E-09 3E-13 102.3 4.1 137 36-172 52-206 (434)
197 4b4t_Q 26S proteasome regulato 98.7 4E-08 1.4E-12 97.4 8.4 147 50-196 16-206 (434)
198 3e4b_A ALGK; tetratricopeptide 98.6 2.1E-07 7.1E-12 94.1 13.5 135 52-196 231-389 (452)
199 3ly7_A Transcriptional activat 98.6 3.5E-07 1.2E-11 89.1 12.7 121 52-175 213-344 (372)
200 1xi4_A Clathrin heavy chain; a 98.6 3.6E-07 1.2E-11 101.6 13.7 95 77-178 1198-1317(1630)
201 2v5f_A Prolyl 4-hydroxylase su 98.6 6E-07 2.1E-11 71.5 11.5 72 77-148 8-87 (104)
202 3bee_A Putative YFRE protein; 98.5 4.9E-07 1.7E-11 70.7 10.2 71 104-174 2-76 (93)
203 2v5f_A Prolyl 4-hydroxylase su 98.5 1.1E-06 3.7E-11 70.0 12.4 78 107-184 5-89 (104)
204 3qww_A SET and MYND domain-con 98.5 4.3E-07 1.5E-11 91.3 12.3 97 82-178 306-424 (433)
205 3qwp_A SET and MYND domain-con 98.5 7.9E-07 2.7E-11 89.3 14.1 101 78-178 291-413 (429)
206 1b89_A Protein (clathrin heavy 98.5 6.2E-07 2.1E-11 89.6 13.0 131 40-188 123-254 (449)
207 1b89_A Protein (clathrin heavy 98.5 3.3E-08 1.1E-12 98.7 3.6 144 41-198 63-240 (449)
208 3ly7_A Transcriptional activat 98.5 1.2E-06 4.1E-11 85.3 13.9 138 63-200 185-345 (372)
209 1pc2_A Mitochondria fission pr 98.5 8.9E-07 3E-11 75.3 10.9 98 52-151 12-115 (152)
210 1xi4_A Clathrin heavy chain; a 98.5 4.5E-07 1.5E-11 100.9 11.1 119 36-167 1102-1221(1630)
211 3qww_A SET and MYND domain-con 98.4 8.1E-07 2.8E-11 89.3 8.7 94 50-143 310-423 (433)
212 3qwp_A SET and MYND domain-con 98.3 1.1E-06 3.8E-11 88.3 9.2 112 43-154 292-426 (429)
213 3bee_A Putative YFRE protein; 98.2 5.6E-06 1.9E-10 64.6 9.1 71 68-140 2-76 (93)
214 3u64_A Protein TP_0956; tetrat 98.2 2.1E-05 7.2E-10 73.8 13.3 108 67-174 147-273 (301)
215 1nzn_A CGI-135 protein, fissio 98.2 3.8E-05 1.3E-09 62.9 13.0 98 87-184 14-117 (126)
216 1klx_A Cysteine rich protein B 98.1 1.1E-05 3.6E-10 67.6 9.8 97 45-148 31-136 (138)
217 4e6h_A MRNA 3'-END-processing 98.0 7.2E-05 2.4E-09 79.3 14.4 145 50-196 355-535 (679)
218 1nzn_A CGI-135 protein, fissio 97.8 0.00015 5E-09 59.5 10.8 95 55-151 18-118 (126)
219 4e6h_A MRNA 3'-END-processing 97.8 8.2E-05 2.8E-09 78.8 11.5 142 57-200 328-505 (679)
220 3u64_A Protein TP_0956; tetrat 97.7 5.9E-05 2E-09 70.8 7.8 90 51-140 176-273 (301)
221 3o48_A Mitochondria fission 1 97.6 0.00067 2.3E-08 55.8 11.8 78 105-182 38-119 (134)
222 1y8m_A FIS1; mitochondria, unk 97.6 0.0012 4.1E-08 54.9 13.0 78 104-181 36-117 (144)
223 3o48_A Mitochondria fission 1 97.3 0.0023 7.7E-08 52.6 11.3 82 71-152 37-123 (134)
224 4h7y_A Dual specificity protei 97.3 0.0032 1.1E-07 52.8 12.2 108 67-177 8-130 (161)
225 1y8m_A FIS1; mitochondria, unk 97.2 0.0059 2E-07 50.8 12.6 80 72-151 37-121 (144)
226 3ffl_A Anaphase-promoting comp 97.0 0.0044 1.5E-07 52.9 10.1 90 77-166 23-147 (167)
227 2uy1_A Cleavage stimulation fa 97.0 0.01 3.4E-07 60.4 14.4 118 56-177 197-356 (493)
228 4g26_A Pentatricopeptide repea 96.9 0.019 6.6E-07 58.4 15.6 141 50-191 38-201 (501)
229 4g26_A Pentatricopeptide repea 96.6 0.03 1E-06 57.0 14.7 123 51-174 83-210 (501)
230 3ffl_A Anaphase-promoting comp 96.6 0.0013 4.3E-08 56.4 3.5 108 43-151 25-165 (167)
231 4gns_B Protein CSD3, chitin bi 96.4 0.011 3.8E-07 62.8 10.0 114 51-167 261-397 (754)
232 2uy1_A Cleavage stimulation fa 96.0 0.11 3.8E-06 52.6 15.0 115 50-167 225-380 (493)
233 3kae_A CDC27, possible protein 95.4 0.29 1E-05 41.8 12.4 122 47-177 11-150 (242)
234 2ff4_A Probable regulatory pro 94.9 0.28 9.7E-06 47.9 13.1 91 79-169 120-233 (388)
235 4h7y_A Dual specificity protei 94.4 0.36 1.2E-05 40.4 10.4 100 55-156 36-142 (161)
236 4gns_B Protein CSD3, chitin bi 94.2 0.17 5.8E-06 53.8 10.1 57 77-133 340-397 (754)
237 4b4t_R RPN7, 26S proteasome re 93.7 0.16 5.6E-06 50.4 8.3 96 77-172 134-239 (429)
238 1ya0_A SMG-7 transcript varian 93.4 0.41 1.4E-05 48.4 10.7 77 109-185 154-230 (497)
239 1ya0_A SMG-7 transcript varian 93.2 0.49 1.7E-05 47.9 11.0 78 76-153 154-232 (497)
240 1zbp_A Hypothetical protein VP 93.2 0.45 1.5E-05 43.8 9.6 61 117-177 7-67 (273)
241 3txn_A 26S proteasome regulato 92.8 0.8 2.7E-05 44.8 11.5 91 79-169 104-209 (394)
242 3mkq_B Coatomer subunit alpha; 92.4 0.6 2E-05 40.3 8.8 101 48-167 15-115 (177)
243 4b4t_S RPN3, 26S proteasome re 91.8 0.3 1E-05 49.3 7.2 136 50-185 148-314 (523)
244 2ff4_A Probable regulatory pro 90.9 0.76 2.6E-05 44.8 9.0 84 51-134 128-232 (388)
245 1zbp_A Hypothetical protein VP 90.8 0.33 1.1E-05 44.7 5.8 56 49-106 8-63 (273)
246 3spa_A Mtrpol, DNA-directed RN 90.3 3.7 0.00013 45.0 14.2 95 76-170 129-230 (1134)
247 3kae_A CDC27, possible protein 90.1 8.3 0.00028 33.0 13.8 83 50-139 45-146 (242)
248 3mkq_A Coatomer beta'-subunit; 89.6 1.6 5.4E-05 46.1 10.8 77 84-164 662-746 (814)
249 4b4t_P 26S proteasome regulato 88.1 7.5 0.00026 38.4 14.0 97 74-170 137-247 (445)
250 3mkq_A Coatomer beta'-subunit; 86.1 3.6 0.00012 43.3 11.0 46 50-102 664-709 (814)
251 4fhn_B Nucleoporin NUP120; pro 84.8 2.8 9.5E-05 46.9 9.7 26 307-332 1021-1050(1139)
252 3txn_A 26S proteasome regulato 84.3 2.5 8.6E-05 41.2 8.0 93 44-136 104-210 (394)
253 3spa_A Mtrpol, DNA-directed RN 83.6 2.4 8.3E-05 46.4 8.0 90 44-136 132-230 (1134)
254 4b4t_R RPN7, 26S proteasome re 83.0 2.5 8.4E-05 41.8 7.4 98 41-138 133-239 (429)
255 3mkq_B Coatomer subunit alpha; 80.4 11 0.00039 32.1 9.7 48 83-134 14-61 (177)
256 4b4t_P 26S proteasome regulato 76.3 8.9 0.0003 37.9 9.0 94 43-136 141-247 (445)
257 4b4t_S RPN3, 26S proteasome re 75.2 7 0.00024 39.4 7.8 70 71-140 228-303 (523)
258 1qsa_A Protein (soluble lytic 72.0 14 0.00048 38.2 9.5 118 52-169 228-347 (618)
259 4a5x_A MITD1, MIT domain-conta 66.9 4.9 0.00017 30.1 3.5 35 68-102 10-44 (86)
260 3lpz_A GET4 (YOR164C homolog); 63.7 46 0.0016 31.4 10.4 27 138-164 133-159 (336)
261 2v6y_A AAA family ATPase, P60 63.7 9.8 0.00033 28.1 4.6 37 159-195 36-72 (83)
262 2w2u_A Hypothetical P60 katani 63.4 8.7 0.0003 28.4 4.3 34 160-193 45-78 (83)
263 2wpv_A GET4, UPF0363 protein Y 60.6 64 0.0022 30.1 10.7 27 139-165 132-158 (312)
264 1wfd_A Hypothetical protein 15 59.7 16 0.00056 27.5 5.4 37 159-195 40-76 (93)
265 1wy6_A Hypothetical protein ST 59.1 55 0.0019 26.9 8.5 78 88-169 75-153 (172)
266 2w2u_A Hypothetical P60 katani 59.1 12 0.00041 27.7 4.3 26 77-102 22-47 (83)
267 3ax2_A Mitochondrial import re 58.9 30 0.001 24.9 6.3 38 146-183 22-59 (73)
268 3ax2_A Mitochondrial import re 58.3 19 0.00065 25.9 5.1 29 78-106 21-49 (73)
269 4gq2_M Nucleoporin NUP120; bet 56.7 68 0.0023 34.9 11.7 95 79-177 815-934 (950)
270 2crb_A Nuclear receptor bindin 56.2 15 0.0005 27.8 4.3 26 76-101 17-42 (97)
271 2v6y_A AAA family ATPase, P60 55.4 15 0.00051 27.1 4.3 26 77-102 14-39 (83)
272 4gq2_M Nucleoporin NUP120; bet 53.8 1.3E+02 0.0043 32.7 13.2 51 113-167 816-866 (950)
273 2cpt_A SKD1 protein, vacuolar 53.7 26 0.0009 27.6 5.8 37 159-195 43-80 (117)
274 4a5x_A MITD1, MIT domain-conta 52.4 68 0.0023 23.6 9.3 33 163-195 45-77 (86)
275 4a1g_A Mitotic checkpoint seri 52.3 68 0.0023 26.5 8.4 49 91-139 82-133 (152)
276 3esl_A Checkpoint serine/threo 52.2 66 0.0023 28.0 8.6 82 107-192 80-163 (202)
277 2v6x_A Vacuolar protein sortin 50.8 29 0.00099 25.5 5.4 35 161-195 40-74 (85)
278 2crb_A Nuclear receptor bindin 50.3 22 0.00077 26.7 4.5 28 107-134 15-42 (97)
279 2wvi_A Mitotic checkpoint seri 48.5 77 0.0026 26.5 8.2 48 91-138 77-127 (164)
280 4fhn_B Nucleoporin NUP120; pro 47.6 69 0.0023 35.6 10.1 90 79-172 817-930 (1139)
281 1om2_A Protein (mitochondrial 46.9 23 0.00079 26.9 4.2 29 78-106 24-52 (95)
282 3t5v_B Nuclear mRNA export pro 45.8 45 0.0015 33.0 7.4 78 111-188 180-271 (455)
283 1wy6_A Hypothetical protein ST 45.4 71 0.0024 26.3 7.1 90 41-137 61-155 (172)
284 2ijq_A Hypothetical protein; s 45.2 1.1E+02 0.0036 25.6 8.5 28 78-105 36-63 (161)
285 1wfd_A Hypothetical protein 15 43.8 28 0.00095 26.2 4.3 26 77-102 18-43 (93)
286 4aez_C MAD3, mitotic spindle c 43.4 83 0.0028 27.8 8.0 49 91-139 131-182 (223)
287 2ijq_A Hypothetical protein; s 43.3 1.3E+02 0.0044 25.1 8.8 59 111-169 36-103 (161)
288 2cwy_A Hypothetical protein TT 43.1 66 0.0022 24.2 6.4 28 79-106 6-33 (94)
289 2vkj_A TM1634; membrane protei 42.8 1E+02 0.0035 23.0 7.0 46 73-118 52-101 (106)
290 2v6x_A Vacuolar protein sortin 42.7 30 0.001 25.4 4.3 26 77-102 16-41 (85)
291 1om2_A Protein (mitochondrial 42.3 44 0.0015 25.3 5.1 40 145-184 24-63 (95)
292 3t5x_A PCI domain-containing p 42.3 47 0.0016 28.8 6.2 92 69-168 9-109 (203)
293 3t5v_B Nuclear mRNA export pro 40.1 58 0.002 32.2 7.1 63 78-140 180-254 (455)
294 2cpt_A SKD1 protein, vacuolar 39.8 32 0.0011 27.1 4.3 22 78-99 22-43 (117)
295 3t5x_A PCI domain-containing p 38.5 61 0.0021 28.1 6.3 51 107-157 14-69 (203)
296 3esl_A Checkpoint serine/threo 37.7 83 0.0028 27.3 6.9 61 77-138 83-146 (202)
297 2cfu_A SDSA1; SDS-hydrolase, l 37.4 78 0.0027 32.8 8.0 48 110-157 452-499 (658)
298 2wpv_A GET4, UPF0363 protein Y 35.5 1.5E+02 0.0051 27.6 8.8 25 107-131 134-158 (312)
299 3mv2_A Coatomer subunit alpha; 31.4 3.3E+02 0.011 25.4 13.4 110 77-190 117-252 (325)
300 2gvs_A Chemosensory protein CS 30.1 47 0.0016 25.8 3.7 33 387-425 59-91 (109)
301 2yvy_A MGTE, Mg2+ transporter 30.0 43 0.0015 30.3 4.1 37 366-402 94-132 (278)
302 3mkr_B Coatomer subunit alpha; 29.2 3.5E+02 0.012 25.1 13.2 110 77-190 105-243 (320)
303 2ynq_A ESSB; membrane protein, 26.3 2.6E+02 0.0088 23.2 7.7 81 79-165 13-97 (161)
304 1qsa_A Protein (soluble lytic 26.0 2E+02 0.007 29.4 8.7 117 51-170 265-410 (618)
305 2ymb_A MITD1, MIT domain-conta 24.6 16 0.00054 33.2 0.0 36 68-103 17-52 (257)
306 4a1g_A Mitotic checkpoint seri 24.3 2.1E+02 0.0072 23.5 6.9 62 125-189 83-146 (152)
307 3myv_A SUSD superfamily protei 24.0 1.4E+02 0.0048 29.1 6.9 31 140-170 189-219 (454)
308 2rpa_A Katanin P60 ATPase-cont 24.0 52 0.0018 23.9 2.7 24 79-102 17-40 (78)
309 3mcx_A SUSD superfamily protei 23.6 1.5E+02 0.0052 29.0 7.1 31 141-171 202-232 (477)
310 2oux_A Magnesium transporter; 23.5 74 0.0025 28.9 4.5 70 324-401 62-133 (286)
311 3qnk_A Putative lipoprotein; a 23.5 2.3E+02 0.008 28.0 8.5 48 123-170 153-211 (517)
312 3lvg_A Clathrin heavy chain 1; 23.1 6.8 0.00023 39.4 -2.9 120 24-154 146-276 (624)
313 3kez_A Putative sugar binding 22.8 1.5E+02 0.0051 29.0 6.8 31 140-170 195-225 (461)
314 3myv_A SUSD superfamily protei 20.9 2E+02 0.0067 28.0 7.2 14 180-193 205-218 (454)
315 3hdx_A SUSD homolog, SUSD supe 20.8 2.5E+02 0.0085 27.5 8.0 48 123-170 156-226 (478)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.83 E-value=7.9e-20 Score=152.94 Aligned_cols=119 Identities=30% Similarity=0.518 Sum_probs=110.5
Q ss_pred hhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH
Q 014256 64 SLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK 142 (428)
Q Consensus 64 al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~ 142 (428)
+..++|....+ ++++|+.|++.|+|++|+.+|+++++++|. +.+|+++|.+|..+|++++|+.+|++++.++|+++.
T Consensus 5 ~a~inP~~a~~--~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 5 LAYINPELAQE--EKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp --CCCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHCHHHHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 44567765555 889999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 143 AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 143 a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
+|+++|.++..+|++++|+..|+++++++|++.+++..+..+
T Consensus 83 a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 999999999999999999999999999999999998777665
No 2
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.81 E-value=2.1e-19 Score=158.65 Aligned_cols=158 Identities=18% Similarity=0.195 Sum_probs=148.1
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..+|..| ..|++++|+..|++++..+|++..+ +..+|.+|...|++++|+..+.+++...|+ ..++.++|.++
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVET--LLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 4556677777 8899999999999999999998877 789999999999999999999999999998 99999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHH
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSL 187 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~ 187 (428)
...++++.|...+.+++.++|.+..++..+|.++..+|++++|+..|+++++++|++..+ .+++++|+..
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 163 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKY 163 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999887 4678899999
Q ss_pred HHHHHHhchhhh
Q 014256 188 YEKEVFQKASKT 199 (428)
Q Consensus 188 ~~~a~~~~~~~~ 199 (428)
|+++++++|.++
T Consensus 164 ~~~al~~~p~~a 175 (184)
T 3vtx_A 164 FKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHTTHHHH
T ss_pred HHHHHhCCccCH
Confidence 999999998765
No 3
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.80 E-value=3.5e-19 Score=162.78 Aligned_cols=162 Identities=19% Similarity=0.160 Sum_probs=144.4
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..+|..+ ..|++++|+..|++++..+|.+..+ +..+|.++...|++++|+.+|+++++++|+ +.+++++|.++
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 83 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQDPEA--LYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAY 83 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 3444455566 8899999999999999999998877 779999999999999999999999999998 89999999999
Q ss_pred HHh-----------cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH---------
Q 014256 118 LKL-----------RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI--------- 177 (428)
Q Consensus 118 ~~~-----------~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~--------- 177 (428)
..+ |++++|+..|.+++.++|+++.+++++|.++..+|++++|+..|+++++++ +++.+
T Consensus 84 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~ 162 (217)
T 2pl2_A 84 VALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYL 162 (217)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
T ss_pred HHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHH
Confidence 999 999999999999999999999999999999999999999999999999999 77766
Q ss_pred -HHHHHHHHHHHHHHHHhchhhhHhhhc
Q 014256 178 -KKQLAEVKSLYEKEVFQKASKTLEKYG 204 (428)
Q Consensus 178 -~~~l~~a~~~~~~a~~~~~~~~~~~~~ 204 (428)
.+++++|+..|++++..+|........
T Consensus 163 ~~g~~~~A~~~~~~al~~~P~~~~~~~~ 190 (217)
T 2pl2_A 163 SMGRLDEALAQYAKALEQAPKDLDLRVR 190 (217)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 456788899999999999887764433
No 4
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.80 E-value=1.7e-19 Score=193.24 Aligned_cols=162 Identities=22% Similarity=0.219 Sum_probs=148.8
Q ss_pred ccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 35 SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
.+++..++..+|..| ..|++++|+.+|+++++++|++..+ +.++|.+|...|++++|+.+|+++++++|+ +.+|++
T Consensus 5 ~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a--~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~n 82 (723)
T 4gyw_A 5 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAA--HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSN 82 (723)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 356778888899999 9999999999999999999998877 889999999999999999999999999999 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHH----------HH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQ----------LA 182 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~----------l~ 182 (428)
+|.+|..+|++++|+..|++|++++|+++.+|+++|.++..+|++++|+..|+++++++|++..++.+ +.
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988544 44
Q ss_pred HHHHHHHHHHHhchhh
Q 014256 183 EVKSLYEKEVFQKASK 198 (428)
Q Consensus 183 ~a~~~~~~a~~~~~~~ 198 (428)
+|.+.+++++.+.+..
T Consensus 163 ~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 163 DYDERMKKLVSIVADQ 178 (723)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhH
Confidence 5677788887776543
No 5
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.80 E-value=2e-19 Score=155.01 Aligned_cols=138 Identities=12% Similarity=0.018 Sum_probs=123.2
Q ss_pred CCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhc
Q 014256 44 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 121 (428)
Q Consensus 44 ~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~ 121 (428)
.+|..+ ..|++++|+..|.+++..+|....+ ++.+|.+|+..|+|++|+.+|+++++++|+ +.+|+++|.+|..+|
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~--~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIK--GFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTT--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 466777 7889999999999999999877666 779999999999999999999999999999 999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHhhCCCcHHHHHHHHH
Q 014256 122 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED-SEFALRLEPQNQEIKKQLAE 183 (428)
Q Consensus 122 ~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~-~~~al~l~P~~~~~~~~l~~ 183 (428)
++++|+..|+++++++|+++.+++++|.++..+|++++|... ++++++++|+++.+......
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ 142 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQ 142 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999877765 59999999999988654443
No 6
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.78 E-value=7.2e-19 Score=175.07 Aligned_cols=169 Identities=10% Similarity=0.007 Sum_probs=149.6
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcC-HHHHHHHHHHHHccCCc-HHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK-FKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~-~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
+++..++..++..+ ..|++++|+..|++++.++|.+..+ |..+|.++...|+ +++|+.+|++++.++|+ ..+|++
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a--~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~ 171 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTV--WHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHH 171 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHH--HHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 44455556666666 7899999999999999999998877 8899999999997 99999999999999999 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHH-----------
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQL----------- 181 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l----------- 181 (428)
+|.++..+|++++|+.+|++++.++|++..+|+++|.++..+|++++|+..|+++++++|++..++..+
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~ 251 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYN 251 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999885443
Q ss_pred HHH-----HHHHHHHHHhchhhhHhhhccc
Q 014256 182 AEV-----KSLYEKEVFQKASKTLEKYGKS 206 (428)
Q Consensus 182 ~~a-----~~~~~~a~~~~~~~~~~~~~~~ 206 (428)
.+| +..|.+++.++|.+...+...+
T Consensus 252 ~eA~~~~el~~~~~Al~l~P~~~~a~~~l~ 281 (382)
T 2h6f_A 252 DRAVLEREVQYTLEMIKLVPHNESAWNYLK 281 (382)
T ss_dssp SHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 333 4668888999988876554433
No 7
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.76 E-value=3.7e-18 Score=155.95 Aligned_cols=146 Identities=15% Similarity=0.130 Sum_probs=135.5
Q ss_pred ccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh-----------cCHHHHHHHHHHHHc
Q 014256 35 SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-----------KKFKEAIDCYSRSIA 102 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~-----------g~~~~Ai~~y~~al~ 102 (428)
.+++..++..+|.++ ..|++++|+..|++++..+|++..+ +..+|.++... |++++|+.+|+++++
T Consensus 35 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a--~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 35 NPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGG--YMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 456667777777777 8999999999999999999998877 77999999999 999999999999999
Q ss_pred cCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHH
Q 014256 103 LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQL 181 (428)
Q Consensus 103 ~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l 181 (428)
++|+ +.+|.++|.++..+|++++|+..|++++.++ +++.+++++|.++..+|++++|+..|+++++++|++..+...+
T Consensus 113 ~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~l 191 (217)
T 2pl2_A 113 VNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRY 191 (217)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 9999 9999999999999999999999999999999 9999999999999999999999999999999999999886554
Q ss_pred HH
Q 014256 182 AE 183 (428)
Q Consensus 182 ~~ 183 (428)
..
T Consensus 192 a~ 193 (217)
T 2pl2_A 192 AS 193 (217)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 8
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.75 E-value=8.4e-18 Score=145.38 Aligned_cols=115 Identities=12% Similarity=0.057 Sum_probs=108.9
Q ss_pred HHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 014256 59 SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD 137 (428)
Q Consensus 59 ~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~ 137 (428)
..|.+++.++|++..+ ++.+|.+++..|+|++|+.+|++++.++|+ +.+|+++|.+|..+|+|++|+..|++++.++
T Consensus 23 ~~l~~al~l~p~~~~~--~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 23 ATLKDINAIPDDMMDD--IYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp CCTGGGCCSCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHhCCCHHHHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 3467778888887766 889999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 014256 138 DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 175 (428)
Q Consensus 138 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~ 175 (428)
|+++.+|+++|.++..+|++++|+..|++++.+.|+.+
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999865
No 9
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.75 E-value=1.3e-17 Score=152.41 Aligned_cols=136 Identities=18% Similarity=0.166 Sum_probs=124.5
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCC-CCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEE-STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMA 116 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p-~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~ 116 (428)
.++...|..| ..|++++|+..|.+++..+| .+..+ ++.+|.+++..|+|++|+.+|.+++..+|+ ..+|.++|.+
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 85 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVT--AYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAA 85 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHH--HHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 3444556666 88999999999999999998 66655 678999999999999999999999999999 8899999999
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--cHHH
Q 014256 117 YLKLRRFQEAEDDCTEALNLDDRYI-------KAYSRRATARKELGKLKESIEDSEFALRLEPQ--NQEI 177 (428)
Q Consensus 117 ~~~~~~~~eA~~~~~~al~l~p~~~-------~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~--~~~~ 177 (428)
|..+|++++|+..|++++.++|+++ .+++++|.++..+|++++|+..|+++++++|+ +..+
T Consensus 86 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 155 (228)
T 4i17_A 86 YRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDA 155 (228)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHH
Confidence 9999999999999999999999998 67999999999999999999999999999999 6665
No 10
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.74 E-value=1.5e-17 Score=142.95 Aligned_cols=131 Identities=13% Similarity=0.061 Sum_probs=118.4
Q ss_pred hHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 014256 57 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALN 135 (428)
Q Consensus 57 Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~ 135 (428)
+...|.+++..+|.+..+ ++.+|.+++..|+|++|+.+|.+++.++|+ +.+|+++|.+|..+|+|++|+..|.+++.
T Consensus 6 ~~~~~~~al~~~p~~~~~--~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQ--LYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp CCCSHHHHTTCCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHhhHHH--HHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 345688999999887666 789999999999999999999999999998 99999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 136 LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 136 l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
++|+++.+++++|.++..+|++++|+..|++++.+.|+++........+...+.
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988776555555555443
No 11
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.73 E-value=1.3e-17 Score=144.15 Aligned_cols=117 Identities=21% Similarity=0.175 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------------AVAYANRAMAYLKLRRFQEAEDDCTEALNL--- 136 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------------~~~~~nla~~~~~~~~~~eA~~~~~~al~l--- 136 (428)
.+..++++|+.+++.|+|++|+.+|+++|+++|+ +.+|.|+|.++.++|+|++|+.+|++||.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4556899999999999999999999999999986 238999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 137 ----DDRYIKAY----SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 137 ----~p~~~~a~----~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
+|+++++| +++|.++..+|++++|+.+|+++++++|++..+...+..+.+...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~ 150 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAI 150 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999999888777777666544
No 12
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.71 E-value=1.9e-16 Score=137.20 Aligned_cols=118 Identities=32% Similarity=0.439 Sum_probs=107.7
Q ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc------------------CCc-HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 014256 72 PDATSEKELGNECFKQKKFKEAIDCYSRSIAL------------------SPT-AVAYANRAMAYLKLRRFQEAEDDCTE 132 (428)
Q Consensus 72 ~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~------------------~p~-~~~~~nla~~~~~~~~~~eA~~~~~~ 132 (428)
..+..++.+|+.+++.|+|++|+.+|.+++.+ +|. ..+|+++|.||+.+|+|++|+.+|++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34566899999999999999999999999999 666 78999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH-HHHHHHHHHHHHHH
Q 014256 133 ALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ-EIKKQLAEVKSLYE 189 (428)
Q Consensus 133 al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~-~~~~~l~~a~~~~~ 189 (428)
++.++|+++.+|+++|.++..+|++++|+.+|++++.++|++. .+...+..+.....
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRA 146 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 66666766665443
No 13
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.71 E-value=1.6e-16 Score=132.79 Aligned_cols=109 Identities=29% Similarity=0.443 Sum_probs=98.7
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHH
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY-------IKAY 144 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~-------~~a~ 144 (428)
.+..++++|+.+++.|+|++|+.+|+++++++|+ +.+|+++|.+|+.+|+|++|+.+|.+++.++|++ ..++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 3556899999999999999999999999999999 9999999999999999999999999999999876 4689
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHH
Q 014256 145 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 182 (428)
Q Consensus 145 ~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~ 182 (428)
+++|.++..+|++++|+..|++++.+.|+ ++....+.
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~ 123 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVK 123 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHH
Confidence 99999999999999999999999999985 44444433
No 14
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.70 E-value=1e-16 Score=136.09 Aligned_cols=129 Identities=15% Similarity=0.081 Sum_probs=115.2
Q ss_pred HHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 014256 59 SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD 137 (428)
Q Consensus 59 ~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~ 137 (428)
..|.+++..+|.+..+ ++.+|..++..|+|++|+.+|.+++..+|+ +.+|+++|.+|..+|+|++|+..|++++.++
T Consensus 5 ~~l~~al~~~p~~~~~--~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQ--LYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHH--HHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 5678888888876666 789999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 138 DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 138 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
|+++.+++++|.++..+|++++|+..|++++.++|+++........+...+.
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988877666666655554
No 15
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.70 E-value=9.5e-17 Score=141.43 Aligned_cols=140 Identities=19% Similarity=0.231 Sum_probs=131.3
Q ss_pred ccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 35 SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
.+++..++..+|.+| ..|++++|+..+.+++...|....+ +..+|.++...++++.|+..+.+++.++|. ..++..
T Consensus 35 ~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~ 112 (184)
T 3vtx_A 35 DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEA--YYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYK 112 (184)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHH
Confidence 456667777888888 9999999999999999999998777 779999999999999999999999999999 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 176 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~ 176 (428)
+|.+|..+|+|++|+..|+++++++|.++.+++++|.++..+|++++|+..|+++++++|+++.
T Consensus 113 lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 113 LGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 9999999999999999999999999999999999999999999999999999999999997653
No 16
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=4.3e-16 Score=128.82 Aligned_cols=113 Identities=29% Similarity=0.476 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
+..++.+|..++..|+|++|+.+|.+++.++|+ +.+|+++|.+|..+|+|++|+.+|++++.++|+++.+++++|.++.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 445889999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhC------CCcHHHHHHHHHHHH
Q 014256 153 ELGKLKESIEDSEFALRLE------PQNQEIKKQLAEVKS 186 (428)
Q Consensus 153 ~lg~~~eA~~~~~~al~l~------P~~~~~~~~l~~a~~ 186 (428)
.+|++++|+..|++++.++ |++..+...+..+..
T Consensus 84 ~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 84 AVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999 998888877776654
No 17
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.69 E-value=7.8e-17 Score=164.83 Aligned_cols=162 Identities=14% Similarity=0.126 Sum_probs=133.1
Q ss_pred ChhhhhcCCCccc-cCCCC-cchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRN-YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRA 114 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~-~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla 114 (428)
....++..+|.+| ..|++ ++|+.+|++++..+|.+..+ +..+|.+|+..|+|++|+.+|+++++++|+..++.++|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEA--WNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHH
Confidence 3344555566666 78888 88889999988888887766 77888888888888888888888888888877888888
Q ss_pred HHHHHh---------cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhhCC---Cc
Q 014256 115 MAYLKL---------RRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL--------GKLKESIEDSEFALRLEP---QN 174 (428)
Q Consensus 115 ~~~~~~---------~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~l--------g~~~eA~~~~~~al~l~P---~~ 174 (428)
.+|..+ |++++|+..|.+++.++|+++.+|+++|.++..+ |++++|+..|+++++++| ++
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 257 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSN 257 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccC
Confidence 888888 8888888888888888888888888888888888 888888888888888888 77
Q ss_pred HHH----------HHHHHHHHHHHHHHHHhchhhhH
Q 014256 175 QEI----------KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 175 ~~~----------~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
..+ .+++++|...|++++.++|....
T Consensus 258 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 293 (474)
T 4abn_A 258 PDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPE 293 (474)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 765 35577888888888888877654
No 18
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.68 E-value=5.4e-16 Score=144.85 Aligned_cols=161 Identities=13% Similarity=0.072 Sum_probs=139.0
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCch-HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc----HHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANR 113 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~-a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~nl 113 (428)
.++-..|..+ ..|++++|+..|++++...|.+.. ...++.+|.+++..|+|++|+..|++++..+|+ +.+++++
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l 95 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYER 95 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHH
Confidence 3444445555 889999999999999999998722 334889999999999999999999999999884 6789999
Q ss_pred HHHHHH--------hcCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHH
Q 014256 114 AMAYLK--------LRRFQEAEDDCTEALNLDDRYIKAY-----------------SRRATARKELGKLKESIEDSEFAL 168 (428)
Q Consensus 114 a~~~~~--------~~~~~eA~~~~~~al~l~p~~~~a~-----------------~~lg~~~~~lg~~~eA~~~~~~al 168 (428)
|.+++. +|++++|+..|++++..+|++..+. +.+|.++..+|++++|+..|++++
T Consensus 96 g~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 175 (261)
T 3qky_A 96 AMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVF 175 (261)
T ss_dssp HHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 999999 9999999999999999999986655 889999999999999999999999
Q ss_pred hhCCCcH---HH----------H----------HHHHHHHHHHHHHHHhchhhhH
Q 014256 169 RLEPQNQ---EI----------K----------KQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 169 ~l~P~~~---~~----------~----------~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
...|++. .+ . +++++|+..|++++...|.+..
T Consensus 176 ~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~ 230 (261)
T 3qky_A 176 DAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPL 230 (261)
T ss_dssp HHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTH
T ss_pred HHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChH
Confidence 9999843 22 1 6678899999999998887754
No 19
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.67 E-value=9e-17 Score=145.70 Aligned_cols=148 Identities=11% Similarity=0.027 Sum_probs=126.3
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHH----------------HHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKE----------------LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~----------------lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
..|++++|+..|.+++..+|.+..+ ++. +|.+|...|+|++|+.+|+++++++|+ ..++++
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~--~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 93 (208)
T 3urz_A 16 EAGQNGQAVSYFRQTIALNIDRTEM--YYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEA 93 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCHHHHHH--HHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCChHH--HHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 7899999999999999999987776 667 999999999999999999999999999 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCcHH---------HHHHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK--LKESIEDSEFALRLEPQNQE---------IKKQL 181 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~--~~eA~~~~~~al~l~P~~~~---------~~~~l 181 (428)
+|.+|..+|++++|+..|++++.++|+++.+++++|.++...|. ...+...+.+++...|.... ..+++
T Consensus 94 lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~ 173 (208)
T 3urz_A 94 CAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRY 173 (208)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCH
Confidence 99999999999999999999999999999999999999987765 45667777777654432211 13568
Q ss_pred HHHHHHHHHHHHhchhhh
Q 014256 182 AEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 182 ~~a~~~~~~a~~~~~~~~ 199 (428)
.+|+..|++++.++|...
T Consensus 174 ~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 174 EKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHHhCCCHH
Confidence 899999999999998654
No 20
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.67 E-value=1.6e-16 Score=145.03 Aligned_cols=142 Identities=14% Similarity=0.142 Sum_probs=122.1
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-H-------HHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A-------VAY 110 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~-------~~~ 110 (428)
.+...+|.+| ..|++++|+.+|++++..+|.+..+ +..+|.++...|+|++|+.+|++++.++|+ . .+|
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~--~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 120 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANA--YIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYY 120 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHH--HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 3444467777 8999999999999999999997766 889999999999999999999999999998 5 669
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHcCCH---------------------------HHHH
Q 014256 111 ANRAMAYLKLRRFQEAEDDCTEALNLDDR--YIKAYSRRATARKELGKL---------------------------KESI 161 (428)
Q Consensus 111 ~nla~~~~~~~~~~eA~~~~~~al~l~p~--~~~a~~~lg~~~~~lg~~---------------------------~eA~ 161 (428)
.++|.++..+|++++|+..|++++.++|+ ++.+++++|.++..+|+. ++|+
T Consensus 121 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~ 200 (228)
T 4i17_A 121 LKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAV 200 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999988877 6666
Q ss_pred HHHHHHHhhCCCcHHHHHHHHH
Q 014256 162 EDSEFALRLEPQNQEIKKQLAE 183 (428)
Q Consensus 162 ~~~~~al~l~P~~~~~~~~l~~ 183 (428)
..|+++++++|++..+...+..
T Consensus 201 ~~~~~a~~l~p~~~~~~~~l~~ 222 (228)
T 4i17_A 201 DYLGEAVTLSPNRTEIKQMQDQ 222 (228)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHhhcCCCCHHHHHHHHH
Confidence 6666666666666655544443
No 21
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.67 E-value=1.2e-16 Score=133.39 Aligned_cols=116 Identities=15% Similarity=0.179 Sum_probs=106.9
Q ss_pred hccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHH
Q 014256 34 VSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYA 111 (428)
Q Consensus 34 ~~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~ 111 (428)
..++..+++...|..| ..|+|++|+..|++++..+|.+..+ +..+|.+|+..|++++|+.+|+++++++|+ ..+|+
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 85 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAIL--YSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYI 85 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHH
Confidence 3456666777777777 9999999999999999999998777 889999999999999999999999999999 99999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014256 112 NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 151 (428)
Q Consensus 112 nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~ 151 (428)
++|.+|..+|+|++|+.+|+++++++|++..++..++.++
T Consensus 86 ~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 86 RKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998764
No 22
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.67 E-value=3.6e-16 Score=167.49 Aligned_cols=132 Identities=20% Similarity=0.266 Sum_probs=123.0
Q ss_pred CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Q 014256 68 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 146 (428)
Q Consensus 68 ~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~ 146 (428)
.|++..+ +.++|++|..+|+|++|+.+|+++++++|+ +.+|+++|.+|..+|++++|+..|++|++++|+++.+|++
T Consensus 5 ~P~~a~a--l~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~n 82 (723)
T 4gyw_A 5 CPTHADS--LNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSN 82 (723)
T ss_dssp -CHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCcHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 4555555 889999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHHHHHHHHhchhhhHh
Q 014256 147 RATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKASKTLE 201 (428)
Q Consensus 147 lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~~a~~~~~~~~~~ 201 (428)
+|.++..+|++++|+..|+++++++|++..+ .+++++|+..|+++++++|.....
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a 147 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDA 147 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH
Confidence 9999999999999999999999999999887 356889999999999999987653
No 23
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.67 E-value=1.4e-16 Score=158.51 Aligned_cols=149 Identities=9% Similarity=0.047 Sum_probs=133.5
Q ss_pred hccChhhhhcCCCccc-cCCC-CcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHH
Q 014256 34 VSSSLKSAKKPSPSGN-SYSR-NYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAY 110 (428)
Q Consensus 34 ~~~~~~~a~~~~~~~y-~~g~-~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~ 110 (428)
..+++..++..+|.+| ..|+ +++|+.+|++++.++|++..+ |..+|.++...|+|++|+.+|++++.++|+ ..+|
T Consensus 126 l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a--~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 126 LNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQV--WHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred hCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHH
Confidence 3455556666666677 7886 999999999999999998877 889999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHHHH-----HHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 111 ANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE-LGKLKES-----IEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 111 ~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~-lg~~~eA-----~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
+++|.++..+|++++|+.+|++++.++|++..+|+++|.++.. .|.+++| +..|++++.++|++..++..+..+
T Consensus 204 ~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~l 283 (382)
T 2h6f_A 204 QHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGI 283 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 5554888 599999999999999887655543
No 24
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.66 E-value=7.3e-16 Score=140.72 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=113.6
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..++.+| ..|++++|+..|.+++..+|....+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.++
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 135 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAATA--YYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVL 135 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHH--HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3444445555 6777777777777777777765544 667777777777777777777777777776 66777777777
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH----------HHHHHHHHH
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSL 187 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~ 187 (428)
...|++++|+..+.+++.++|.++.+++.+|.++...|++++|+..|++++.+.|++..+. +++.+|...
T Consensus 136 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 215 (243)
T 2q7f_A 136 VKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEM 215 (243)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHH
Confidence 7777777777777777777777777777777777777777777777777777777766552 334566667
Q ss_pred HHHHHHhchhhhHhh
Q 014256 188 YEKEVFQKASKTLEK 202 (428)
Q Consensus 188 ~~~a~~~~~~~~~~~ 202 (428)
+++++..+|......
T Consensus 216 ~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 216 LDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHHHHHCTTCHHHH
T ss_pred HHHHHccCcchHHHH
Confidence 777777766655543
No 25
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.66 E-value=6.4e-16 Score=152.30 Aligned_cols=164 Identities=24% Similarity=0.270 Sum_probs=110.3
Q ss_pred ccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 35 SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
.++...++..+|..| ..|++++|+..|++++..+|.+..+ +..+|.++...|++++|+..|.+++.++|+ ..++.+
T Consensus 165 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 242 (388)
T 1w3b_A 165 QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA--YINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGN 242 (388)
T ss_dssp CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHH
Confidence 344445555566666 6677777777777777777766555 556777777777777777777777777766 666677
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH----------HHHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLA 182 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~ 182 (428)
+|.+|..+|++++|+..|.+++.++|+++.++.++|.++...|++++|+..|++++.+.|.+..+. ++++
T Consensus 243 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 322 (388)
T 1w3b_A 243 LACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIE 322 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHH
Confidence 777777777777777777777777777777777777777777777777777777777777665542 3456
Q ss_pred HHHHHHHHHHHhchhhhH
Q 014256 183 EVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 183 ~a~~~~~~a~~~~~~~~~ 200 (428)
+|...+++++...|....
T Consensus 323 ~A~~~~~~al~~~p~~~~ 340 (388)
T 1w3b_A 323 EAVRLYRKALEVFPEFAA 340 (388)
T ss_dssp HHHHHHHHHTTSCTTCHH
T ss_pred HHHHHHHHHHhcCCCcHH
Confidence 666666666666665443
No 26
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.66 E-value=1.2e-15 Score=132.62 Aligned_cols=155 Identities=15% Similarity=0.195 Sum_probs=138.6
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHh
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 120 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~ 120 (428)
..++..+ ..|++++|+..|.+++...|....+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.++...
T Consensus 12 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 89 (186)
T 3as5_A 12 RDKGISHAKAGRYSQAVMLLEQVYDADAFDVDV--ALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQV 89 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTTTCCTTSCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCccChHH--HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 3445555 7799999999999999999887655 789999999999999999999999999998 88999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHHHHH
Q 014256 121 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEK 190 (428)
Q Consensus 121 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~~ 190 (428)
|++++|+..+.+++..+|.++.+++.+|.++...|++++|+..+++++.+.|.+..+ .+++.+|...+++
T Consensus 90 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 169 (186)
T 3as5_A 90 QKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKK 169 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998766 3456778888888
Q ss_pred HHHhchhhh
Q 014256 191 EVFQKASKT 199 (428)
Q Consensus 191 a~~~~~~~~ 199 (428)
++...|...
T Consensus 170 ~~~~~~~~~ 178 (186)
T 3as5_A 170 ANELDEGAS 178 (186)
T ss_dssp HHHHHHCCC
T ss_pred HHHcCCCch
Confidence 887776544
No 27
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.65 E-value=2.5e-15 Score=131.65 Aligned_cols=127 Identities=17% Similarity=0.173 Sum_probs=116.2
Q ss_pred ccCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHH-HHHhcCH--H
Q 014256 49 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMA-YLKLRRF--Q 124 (428)
Q Consensus 49 y~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~-~~~~~~~--~ 124 (428)
+..|++++|+..|.+++..+|.+..+ +..+|.+|+..|+|++|+.+|.+++.++|+ +.++.++|.+ +...|++ +
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSEQ--WALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchH
Confidence 47899999999999999999988766 889999999999999999999999999998 8999999999 8899999 9
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 125 EAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 125 eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
+|+..|.+++.++|+++.+++.+|.++..+|++++|+..|++++.++|++...
T Consensus 99 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 99 QTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 99999999999999999999999999999999999999999999999988544
No 28
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.65 E-value=6.3e-16 Score=152.33 Aligned_cols=165 Identities=18% Similarity=0.162 Sum_probs=150.2
Q ss_pred ccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 35 SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
.++...+...++..+ ..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|++++.++|+ ..+|.+
T Consensus 131 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 208 (388)
T 1w3b_A 131 NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVA--WSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYIN 208 (388)
T ss_dssp CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 456666677788888 8899999999999999999987766 779999999999999999999999999999 889999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLA 182 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~ 182 (428)
+|.++...|++++|+..|.+++.++|+++.++.++|.++...|++++|+..|++++.++|+++.+ .+++.
T Consensus 209 lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 288 (388)
T 1w3b_A 209 LGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA 288 (388)
T ss_dssp HHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999998876 35678
Q ss_pred HHHHHHHHHHHhchhhhHh
Q 014256 183 EVKSLYEKEVFQKASKTLE 201 (428)
Q Consensus 183 ~a~~~~~~a~~~~~~~~~~ 201 (428)
+|...|++++...|.+...
T Consensus 289 ~A~~~~~~al~~~p~~~~~ 307 (388)
T 1w3b_A 289 EAEDCYNTALRLCPTHADS 307 (388)
T ss_dssp HHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHhhCcccHHH
Confidence 8999999999998877653
No 29
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.65 E-value=2.6e-15 Score=137.08 Aligned_cols=158 Identities=15% Similarity=0.152 Sum_probs=130.3
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYL 118 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~ 118 (428)
++..+|..+ ..|++++|+..|.+++..+|....+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.++.
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 102 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKEDAIP--YINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYV 102 (243)
T ss_dssp -----------------CCTTHHHHHTTCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCcccHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 445566666 8899999999999999999987766 779999999999999999999999999998 899999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHHH
Q 014256 119 KLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLY 188 (428)
Q Consensus 119 ~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~ 188 (428)
.+|++++|+..+.+++..+|.+..+++.+|.++...|++++|+..+++++.+.|++..+ .+++.+|...+
T Consensus 103 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 182 (243)
T 2q7f_A 103 VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQF 182 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998876 34566778888
Q ss_pred HHHHHhchhhhH
Q 014256 189 EKEVFQKASKTL 200 (428)
Q Consensus 189 ~~a~~~~~~~~~ 200 (428)
.+++...|....
T Consensus 183 ~~~~~~~~~~~~ 194 (243)
T 2q7f_A 183 AAVTEQDPGHAD 194 (243)
T ss_dssp HHHHHHCTTCHH
T ss_pred HHHHHhCcccHH
Confidence 888877765543
No 30
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.65 E-value=4e-15 Score=129.06 Aligned_cols=106 Identities=28% Similarity=0.446 Sum_probs=101.5
Q ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 014256 72 PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 150 (428)
Q Consensus 72 ~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~ 150 (428)
..+..++.+|.+++..|+|++|+.+|++++.++|+ +.+|+++|.+|+.+|+|++|+.+|.+++.++|+++.+|+++|.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 34556899999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 151 RKELGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 151 ~~~lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
+..+|++++|+..|++++.++|++..+
T Consensus 89 ~~~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 999999999999999999999999774
No 31
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.64 E-value=9.5e-16 Score=140.89 Aligned_cols=158 Identities=18% Similarity=0.233 Sum_probs=139.1
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCc-----hHHHHHHHHHHHHHhcCHHHHHHHHHHHHc----------
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP-----DATSEKELGNECFKQKKFKEAIDCYSRSIA---------- 102 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~-----~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~---------- 102 (428)
..++..+|.+| ..|++++|+..|.+++..+|... .+..+..+|.++...|++++|+.+|.+++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 117 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTK 117 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHH
Confidence 34556666677 89999999999999999887651 134588999999999999999999999999
Q ss_pred ----------------cCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 014256 103 ----------------LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSE 165 (428)
Q Consensus 103 ----------------~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~ 165 (428)
.+|. ..++.++|.++...|++++|+..|++++.++|.++.+++.+|.++..+|++++|+..|+
T Consensus 118 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 197 (258)
T 3uq3_A 118 LRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCN 197 (258)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 5666 77899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcHHH----------HHHHHHHHHHHHHHHHhch
Q 014256 166 FALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 166 ~al~l~P~~~~~----------~~~l~~a~~~~~~a~~~~~ 196 (428)
+++.++|++..+ .+++.+|...|++++...|
T Consensus 198 ~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 238 (258)
T 3uq3_A 198 KAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDA 238 (258)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCh
Confidence 999999998876 3557788888999888883
No 32
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.64 E-value=2.3e-15 Score=135.32 Aligned_cols=154 Identities=14% Similarity=0.037 Sum_probs=111.2
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYL 118 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~ 118 (428)
++..++..+ ..|++++|+..|.+++..+|....+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 87 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKNELA--WLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC 87 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHH--HHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 334445555 6777777777777777777766555 667777777777777777777777777776 777777777777
Q ss_pred Hh-cCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHH
Q 014256 119 KL-RRFQEAEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVK 185 (428)
Q Consensus 119 ~~-~~~~eA~~~~~~al~--l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~ 185 (428)
.. |++++|+..+++++. .+|.+..+++.+|.++...|++++|+..|++++...|.+..+ .+++.+|.
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 167 (225)
T 2vq2_A 88 GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDAD 167 (225)
T ss_dssp TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHH
Confidence 77 777777777777777 556667777777777777777777777777777777776654 34455666
Q ss_pred HHHHHHHHhch
Q 014256 186 SLYEKEVFQKA 196 (428)
Q Consensus 186 ~~~~~a~~~~~ 196 (428)
..+++++...|
T Consensus 168 ~~~~~~~~~~~ 178 (225)
T 2vq2_A 168 YYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhCC
Confidence 66666666655
No 33
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.64 E-value=5.4e-16 Score=151.47 Aligned_cols=135 Identities=27% Similarity=0.318 Sum_probs=122.8
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-H---------------HHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A---------------VAYANR 113 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~---------------~~~~nl 113 (428)
.++++++|+..|.+++..+|....+ ++.+|++++..|+|++|+.+|.+++.++|. . .+|+++
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~~a~~--~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl 202 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLEQSTI--VKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNL 202 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHHHHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHH
Confidence 5678888999999988887765555 889999999999999999999999999987 2 789999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 186 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 186 (428)
|.||+.+|+|++|+.+|++++.++|+++.+++++|.++..+|++++|+.+|+++++++|++..++..+..+..
T Consensus 203 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~ 275 (336)
T 1p5q_A 203 AMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988655555443
No 34
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.63 E-value=2.4e-15 Score=140.02 Aligned_cols=155 Identities=10% Similarity=0.045 Sum_probs=137.4
Q ss_pred CCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc----HHHHHHHHHHHHH
Q 014256 45 SPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLK 119 (428)
Q Consensus 45 ~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~nla~~~~~ 119 (428)
+|..+ ..|++++|+..|++++..+|.+..+ +..+|.+++..|+|++|+.+|.+++...++ ..+|.++|.++..
T Consensus 9 ~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~ 86 (272)
T 3u4t_A 9 YADFLFKNNNYAEAIEVFNKLEAKKYNSPYI--YNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMK 86 (272)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHTTCCCSTT--HHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHH
Confidence 44455 8899999999999999999998877 779999999999999999999999994322 5679999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHH----------HHHHHHHHHH
Q 014256 120 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK----------QLAEVKSLYE 189 (428)
Q Consensus 120 ~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~----------~l~~a~~~~~ 189 (428)
+|++++|+..|.+++.++|.++.++..+|.++..+|++++|+..|++++.++|.+..++. ++.+|...|.
T Consensus 87 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 166 (272)
T 3u4t_A 87 KGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFV 166 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987743 3457888888
Q ss_pred HHHHhchhhhHh
Q 014256 190 KEVFQKASKTLE 201 (428)
Q Consensus 190 ~a~~~~~~~~~~ 201 (428)
+++..+|.....
T Consensus 167 ~a~~~~p~~~~~ 178 (272)
T 3u4t_A 167 KVLELKPNIYIG 178 (272)
T ss_dssp HHHHHSTTCHHH
T ss_pred HHHHhCccchHH
Confidence 888888776543
No 35
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.63 E-value=2.4e-16 Score=135.54 Aligned_cols=125 Identities=12% Similarity=0.050 Sum_probs=108.1
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKL 157 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~ 157 (428)
.+|.++...|++++|+..|.+++..+|. +..++++|.+|+.+|+|++|+..|++++.++|+++.+|+++|.++..+|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 4788999999999999999999999998 888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHH----------HHHHHH-HHHHHHHhchhhhHhhh
Q 014256 158 KESIEDSEFALRLEPQNQEIKKQ----------LAEVKS-LYEKEVFQKASKTLEKY 203 (428)
Q Consensus 158 ~eA~~~~~~al~l~P~~~~~~~~----------l~~a~~-~~~~a~~~~~~~~~~~~ 203 (428)
++|+..|+++++++|+++.++.. +.++.. ++++++.++|.++....
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~ 138 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYK 138 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHH
Confidence 99999999999999999887332 334444 45889999988876544
No 36
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.63 E-value=3.6e-15 Score=137.43 Aligned_cols=156 Identities=12% Similarity=0.044 Sum_probs=89.0
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHc--cCCc-HHHHHHHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA--LSPT-AVAYANRAMA 116 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~--~~p~-~~~~~nla~~ 116 (428)
++..++.+| ..|++++|+..|.+++..+|....+ +..+|.+++..|++++|+.+|.+++. ..|. ..++.++|.+
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~ 150 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSRNARV--LNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLV 150 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHH--HHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHH
Confidence 333344444 5566666666666666665554433 45566666666666666666666665 4444 5555666666
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHH
Q 014256 117 YLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKS 186 (428)
Q Consensus 117 ~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~ 186 (428)
+...|++++|+..+.+++..+|.++.+++.+|.++..+|++++|+..|++++.+.|.+... .+++.+|..
T Consensus 151 ~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~ 230 (252)
T 2ho1_A 151 SLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAAS 230 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666655443 233444555
Q ss_pred HHHHHHHhchhh
Q 014256 187 LYEKEVFQKASK 198 (428)
Q Consensus 187 ~~~~a~~~~~~~ 198 (428)
.+++++...|.+
T Consensus 231 ~~~~~~~~~p~~ 242 (252)
T 2ho1_A 231 YGLQLKRLYPGS 242 (252)
T ss_dssp HHHHHHHHCTTS
T ss_pred HHHHHHHHCCCC
Confidence 555555554443
No 37
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.63 E-value=2e-15 Score=147.35 Aligned_cols=149 Identities=13% Similarity=0.143 Sum_probs=90.2
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 128 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~ 128 (428)
..|++++|+..|++++..+|.+..+ +..+|.++...|+|++|+.+|.+++.++|+ ..+|.++|.+|..+|++++|+.
T Consensus 77 ~~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 154 (365)
T 4eqf_A 77 KEGDLPVTILFMEAAILQDPGDAEA--WQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACE 154 (365)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCcCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHH
Confidence 4555555555555555555554433 445555555555555555555555555554 5555555555555555555554
Q ss_pred HHHHHHhc--------------------------------------------CCC--CHHHHHHHHHHHHHcCCHHHHHH
Q 014256 129 DCTEALNL--------------------------------------------DDR--YIKAYSRRATARKELGKLKESIE 162 (428)
Q Consensus 129 ~~~~al~l--------------------------------------------~p~--~~~a~~~lg~~~~~lg~~~eA~~ 162 (428)
.|.+++.+ +|. ++.+++.+|.++..+|++++|+.
T Consensus 155 ~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~ 234 (365)
T 4eqf_A 155 ALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAID 234 (365)
T ss_dssp HHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHH
Confidence 44444443 344 67777777777777777777777
Q ss_pred HHHHHHhhCCCcHHH----------HHHHHHHHHHHHHHHHhchhhhH
Q 014256 163 DSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 163 ~~~~al~l~P~~~~~----------~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
.|++++.+.|++..+ .+++.+|+..|++++..+|....
T Consensus 235 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 282 (365)
T 4eqf_A 235 AFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIR 282 (365)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchH
Confidence 777777777777655 24566777777777777766544
No 38
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.62 E-value=1.6e-15 Score=155.05 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=132.7
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh---------cCHHHHHHHHHHHHccCCc-H
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ---------KKFKEAIDCYSRSIALSPT-A 107 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~---------g~~~~Ai~~y~~al~~~p~-~ 107 (428)
..++..+|.+| ..|++++|+.+|++++..+|+ . ..+..+|.++... |+|++|+.+|+++++++|+ .
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~--~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 213 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-K--VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG 213 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-H--HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-H--HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH
Confidence 34445555566 889999999999999999988 3 4588999999999 9999999999999999999 9
Q ss_pred HHHHHHHHHHHHh--------cCHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 014256 108 VAYANRAMAYLKL--------RRFQEAEDDCTEALNLDD---RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 176 (428)
Q Consensus 108 ~~~~nla~~~~~~--------~~~~eA~~~~~~al~l~p---~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~ 176 (428)
.+|+++|.+|..+ |+|++|+..|++++.++| .++.+|+++|.++..+|++++|+..|+++++++|++..
T Consensus 214 ~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 293 (474)
T 4abn_A 214 RSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPE 293 (474)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 9999999999999 999999999999999999 99999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHH
Q 014256 177 IKKQLAEVKSLY 188 (428)
Q Consensus 177 ~~~~l~~a~~~~ 188 (428)
++..+..+...+
T Consensus 294 a~~~l~~~~~~l 305 (474)
T 4abn_A 294 PQQREQQLLEFL 305 (474)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 866666554433
No 39
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.62 E-value=5.6e-15 Score=136.11 Aligned_cols=158 Identities=16% Similarity=0.137 Sum_probs=140.3
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..++..| ..|++++|+..|++++..+|....+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.+|
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 115 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADA--HAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 4455666666 8899999999999999999987666 789999999999999999999999999998 88999999999
Q ss_pred HHhcCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH----------HHHHHHH
Q 014256 118 LKLRRFQEAEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVK 185 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~--l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~ 185 (428)
...|++++|+..+.+++. .+|.+..+++.+|.++...|++++|+..|++++.+.|.+..+. +++.+|.
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 195 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPAR 195 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999 8899999999999999999999999999999999999987763 4466777
Q ss_pred HHHHHHHHhchhhh
Q 014256 186 SLYEKEVFQKASKT 199 (428)
Q Consensus 186 ~~~~~a~~~~~~~~ 199 (428)
..+.+++...|...
T Consensus 196 ~~~~~~~~~~~~~~ 209 (252)
T 2ho1_A 196 QYYDLFAQGGGQNA 209 (252)
T ss_dssp HHHHHHHTTSCCCH
T ss_pred HHHHHHHHhCcCcH
Confidence 77777776665443
No 40
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.61 E-value=1.4e-14 Score=134.62 Aligned_cols=147 Identities=16% Similarity=0.086 Sum_probs=129.8
Q ss_pred cCCCCcchHHHHHhhhhcCCCC--chHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEEST--PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEA 126 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~--~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA 126 (428)
..|++++|+..|.+++...+.. ..+..+..+|.+++..|++++|+.+|.+++..+|. ..+|.++|.+|...|++++|
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A 96 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 96 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHH
Confidence 6789999999999999985422 23555889999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH---------HHHHHHHHHHHHHHHHhch
Q 014256 127 EDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI---------KKQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 127 ~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~---------~~~l~~a~~~~~~a~~~~~ 196 (428)
+..|.+++.++|.++.+++.+|.++..+|++++|+..|++++.+.|++... .+++.+|...+.+++...|
T Consensus 97 ~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 175 (275)
T 1xnf_A 97 YEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSD 175 (275)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999998754 3455666666666665543
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.61 E-value=5.9e-15 Score=153.81 Aligned_cols=144 Identities=15% Similarity=0.049 Sum_probs=88.9
Q ss_pred CCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHH
Q 014256 52 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDC 130 (428)
Q Consensus 52 g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~ 130 (428)
|++++|+..|++++..+|.+..+ +..+|.++...|+|++|+.+|+++++++|+ ..++.++|.+|..+|++++|+..|
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 80 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVA--WLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLL 80 (568)
T ss_dssp ------------------CCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 56677777777777777766555 667777777777777777777777777776 667777777777777777777777
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------H---HHHHHHHHHHHHHHHhchh
Q 014256 131 TEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------K---KQLAEVKSLYEKEVFQKAS 197 (428)
Q Consensus 131 ~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~---~~l~~a~~~~~~a~~~~~~ 197 (428)
++++.++|++..+++++|.++..+|++++|+..|+++++++|++..+ . +++++|...|++++..+|.
T Consensus 81 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 160 (568)
T 2vsy_A 81 QQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVG 160 (568)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCC
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCc
Confidence 77777777777777777777777777777777777777777776554 2 4555666666666666654
No 42
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.61 E-value=4.9e-15 Score=144.55 Aligned_cols=158 Identities=13% Similarity=0.086 Sum_probs=136.7
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-----------
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----------- 106 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----------- 106 (428)
..++..+|.+| ..|++++|+..|++++..+|.+..+ +..+|.+|...|++++|+.+|.+++.++|+
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 176 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKA--LMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGS 176 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHH--HHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccc
Confidence 33444455556 8899999999999999999987766 789999999999999999999999987653
Q ss_pred ------------------------------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 014256 107 ------------------------------------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 150 (428)
Q Consensus 107 ------------------------------------~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~ 150 (428)
+.+++++|.+|..+|++++|+..|.+++.++|+++.+++++|.+
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 256 (365)
T 4eqf_A 177 PGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGAT 256 (365)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCcHHHH----------HHHHHHHHHHHHHHHhchhh
Q 014256 151 RKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKASK 198 (428)
Q Consensus 151 ~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~~a~~~~~~~ 198 (428)
+..+|++++|+..|++++.++|++..++ +++.+|...|++++.+.|..
T Consensus 257 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 257 LANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999998873 44567777777777776543
No 43
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.61 E-value=7.4e-15 Score=131.99 Aligned_cols=161 Identities=12% Similarity=0.035 Sum_probs=138.2
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh-cCHHHHHHHHHHHHc--cCCc-HHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-KKFKEAIDCYSRSIA--LSPT-AVAYA 111 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~-g~~~~Ai~~y~~al~--~~p~-~~~~~ 111 (428)
+...++..++.+| ..|++++|+..|.+++..+|....+ +..+|.++... |++++|+.+|.+++. .+|. ..++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 117 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEI--NNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANL 117 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHH--HHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHH
Confidence 3345566667777 8999999999999999999987766 77999999999 999999999999999 5566 78899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CcHHHH----------HH
Q 014256 112 NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP-QNQEIK----------KQ 180 (428)
Q Consensus 112 nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P-~~~~~~----------~~ 180 (428)
++|.++...|++++|+..+.+++..+|.++.+++.+|.++...|++++|+..+++++.+.| .+.... +.
T Consensus 118 ~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (225)
T 2vq2_A 118 NKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGN 197 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999 887763 23
Q ss_pred HHHHHHHHHHHHHhchhhh
Q 014256 181 LAEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 181 l~~a~~~~~~a~~~~~~~~ 199 (428)
...+..+++......|.+.
T Consensus 198 ~~~a~~~~~~~~~~~p~~~ 216 (225)
T 2vq2_A 198 AQAAYEYEAQLQANFPYSE 216 (225)
T ss_dssp HHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhCCCCH
Confidence 4455555555555555544
No 44
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.60 E-value=4e-15 Score=133.21 Aligned_cols=140 Identities=24% Similarity=0.245 Sum_probs=118.5
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-H----------------HHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A----------------VAYAN 112 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~----------------~~~~n 112 (428)
..|+++.|.+.+.......+. .+..+..+|..++..|+|++|+.+|.+++.+.|. + .+|.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (198)
T 2fbn_A 16 NLYFQGAKKSIYDYTDEEKVQ--SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLN 93 (198)
T ss_dssp ------CCCSGGGCCHHHHHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhhCCHHHHHH--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHH
Confidence 566777777776655544333 3445889999999999999999999999998876 5 78999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKE 191 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~~a 191 (428)
+|.+|+.+|+|++|+.+|.+++.++|.++.+++++|.++..+|++++|+..|++++.++|++..+...+..+.....+.
T Consensus 94 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 94 LATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988888777665543
No 45
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.60 E-value=8.5e-16 Score=156.45 Aligned_cols=138 Identities=25% Similarity=0.325 Sum_probs=121.3
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc----------------HHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----------------AVAYANR 113 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----------------~~~~~nl 113 (428)
..+++++|+..|..++...|....+ ++.+|+.+++.|+|++|+.+|.+++.++|. ..+|+|+
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~~a~~--~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl 323 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLEQAAI--VKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNL 323 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHHHHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHH
Confidence 5677888998888888887765544 889999999999999999999999999886 3789999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
|.||+++|+|++|+.+|++++.++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..++..+..+...+.
T Consensus 324 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~ 399 (457)
T 1kt0_A 324 AMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAK 399 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999988877777665544
No 46
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.60 E-value=1.3e-15 Score=162.69 Aligned_cols=155 Identities=9% Similarity=-0.059 Sum_probs=140.6
Q ss_pred ccCCCCcchHHHHHhhh--------hcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHH
Q 014256 49 NSYSRNYDPVSHISSSL--------MNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 119 (428)
Q Consensus 49 y~~g~~~~Ai~~~~~al--------~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~ 119 (428)
+..|++++|+..|++++ ..+|.+..+ +..+|.+++..|+|++|+..|+++++.+|+ ..+|+++|.+|+.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~--~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVEL--PLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhH--HHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 47899999999999999 888988777 779999999999999999999999999998 9999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH----------HHHHHHHHHHH
Q 014256 120 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYE 189 (428)
Q Consensus 120 ~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~ 189 (428)
+|+|++|+..|+++++++|+++.+++++|.++..+|++++ +..|+++++++|++..++ +++++|+..|+
T Consensus 480 ~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 558 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLD 558 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 999999999999998873 45778888888
Q ss_pred HHHHhchhhhHhhhccc
Q 014256 190 KEVFQKASKTLEKYGKS 206 (428)
Q Consensus 190 ~a~~~~~~~~~~~~~~~ 206 (428)
+++.++|.....+.+.+
T Consensus 559 ~al~l~P~~~~a~~~~~ 575 (681)
T 2pzi_A 559 EVPPTSRHFTTARLTSA 575 (681)
T ss_dssp TSCTTSTTHHHHHHHHH
T ss_pred hhcccCcccHHHHHHHH
Confidence 88888887766554443
No 47
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.60 E-value=7.8e-16 Score=164.42 Aligned_cols=147 Identities=9% Similarity=-0.088 Sum_probs=134.4
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANR 113 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nl 113 (428)
++...++..++.+| ..|++++|+..|++++..+|++..+ ++.+|.+++..|+|++|+.+|+++++++|+ +.+|+++
T Consensus 430 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~l 507 (681)
T 2pzi_A 430 SESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRL--VWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLAL 507 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHH
T ss_pred ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 34445555556666 8899999999999999999998777 889999999999999999999999999998 8999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 185 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 185 (428)
|.+|..+|+|++ +..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++..+..+.
T Consensus 508 g~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 508 AATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999999 99999999999999999999999999999999999999999999999998876666553
No 48
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.60 E-value=3.2e-15 Score=142.50 Aligned_cols=164 Identities=13% Similarity=-0.006 Sum_probs=137.8
Q ss_pred ccChhhhhcCCCccc-cCC-CCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHH
Q 014256 35 SSSLKSAKKPSPSGN-SYS-RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYA 111 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g-~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~ 111 (428)
.++...++..++..+ ..| ++++|+.+|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++...|. ...+.
T Consensus 86 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 163 (330)
T 3hym_B 86 YPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPA--WIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPML 163 (330)
T ss_dssp CTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHH
T ss_pred CcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHH
Confidence 345556667777777 778 8899999999999999887766 779999999999999999999999999888 77788
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---------CCcHHH-----
Q 014256 112 NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE---------PQNQEI----- 177 (428)
Q Consensus 112 nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~---------P~~~~~----- 177 (428)
++|.+|...|++++|+..+.+++..+|.++.+++.+|.++...|++++|+..|++++.+. |....+
T Consensus 164 ~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la 243 (330)
T 3hym_B 164 YIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLG 243 (330)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999886 443333
Q ss_pred -----HHHHHHHHHHHHHHHHhchhhhH
Q 014256 178 -----KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 178 -----~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
.+++++|...+++++...|....
T Consensus 244 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 271 (330)
T 3hym_B 244 HVCRKLKKYAEALDYHRQALVLIPQNAS 271 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCSH
T ss_pred HHHHHhcCHHHHHHHHHHHHhhCccchH
Confidence 35678888889988888877654
No 49
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.59 E-value=1.3e-14 Score=141.11 Aligned_cols=156 Identities=13% Similarity=0.078 Sum_probs=108.0
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHh
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 120 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~ 120 (428)
..+|..| ..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++.++|+ ..++.++|.+|..+
T Consensus 68 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 145 (368)
T 1fch_A 68 FEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEA--WQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE 145 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Confidence 3444444 6677777777777777777766555 567777777777777777777777777776 66777777777777
Q ss_pred cCHHHHHHHHHHHHhcC-------------------------------------------------CC--CHHHHHHHHH
Q 014256 121 RRFQEAEDDCTEALNLD-------------------------------------------------DR--YIKAYSRRAT 149 (428)
Q Consensus 121 ~~~~eA~~~~~~al~l~-------------------------------------------------p~--~~~a~~~lg~ 149 (428)
|++++|+..+.+++.++ |. ++.+++.+|.
T Consensus 146 g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~ 225 (368)
T 1fch_A 146 SLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGV 225 (368)
T ss_dssp TCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHH
Confidence 76666666665555443 33 5667777788
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHHHHHHHHhchhhhH
Q 014256 150 ARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 150 ~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
++...|++++|+..|++++.++|++..+ .+++.+|...|++++..+|....
T Consensus 226 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 286 (368)
T 1fch_A 226 LFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIR 286 (368)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Confidence 8888888888888888888777777655 24566777777777777766544
No 50
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=5.2e-15 Score=135.92 Aligned_cols=143 Identities=24% Similarity=0.357 Sum_probs=126.7
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhh--------------------------cCCCCchHHHHHHHHHHHHHhcCHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLM--------------------------NEESTPDATSEKELGNECFKQKKFKE 92 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~--------------------------~~p~~~~a~~~~~lg~~~~~~g~~~~ 92 (428)
.++..++.+| ..|++++|+..|.+++. .+|... ..+..+|.+++..|+|++
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKA--EEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchH--HHHHHHHHHHHHhcCHHH
Confidence 4445566666 78888888888888888 444433 348899999999999999
Q ss_pred HHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 014256 93 AIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 171 (428)
Q Consensus 93 Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~ 171 (428)
|+.+|.+++..+|. ..++.++|.++..+|++++|+..|.+++.++|+++.+++.+|.++..+|++++|+..|+++++++
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 99999999999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------CCcHHHHHHHHHH
Q 014256 172 ------PQNQEIKKQLAEV 184 (428)
Q Consensus 172 ------P~~~~~~~~l~~a 184 (428)
|++..+...+..+
T Consensus 238 ~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 238 AEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHTTTTHHHHHHHHHHT
T ss_pred hhhcCCCchHHHHHHHHHh
Confidence 8888877666544
No 51
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.59 E-value=3.5e-14 Score=118.32 Aligned_cols=113 Identities=35% Similarity=0.526 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
+..++.+|..++..|+|++|+.+|.+++..+|+ +.+|+++|.++..+|+|++|+..|.+++.++|+++.+++++|.++.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 444889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCC-----cHHHHHHHHHHHH
Q 014256 153 ELGKLKESIEDSEFALRLEPQ-----NQEIKKQLAEVKS 186 (428)
Q Consensus 153 ~lg~~~eA~~~~~~al~l~P~-----~~~~~~~l~~a~~ 186 (428)
.+|++++|+..|++++.++|+ +..+...+..+..
T Consensus 89 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 89 EMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 5666555555543
No 52
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.58 E-value=2.1e-14 Score=137.29 Aligned_cols=129 Identities=14% Similarity=0.056 Sum_probs=74.1
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 128 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~ 128 (428)
..|++++|+..|++++..+|+.........+.+.+...|++++|+.+|++++..+|+ +.+|+++|.++.++|++++|+.
T Consensus 142 ~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~ 221 (291)
T 3mkr_A 142 KLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEG 221 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 556666666666666666655432211111112223335666666666666666665 5566666666666666666666
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhhCCCcHHHH
Q 014256 129 DCTEALNLDDRYIKAYSRRATARKELGKLKE-SIEDSEFALRLEPQNQEIK 178 (428)
Q Consensus 129 ~~~~al~l~p~~~~a~~~lg~~~~~lg~~~e-A~~~~~~al~l~P~~~~~~ 178 (428)
.+.+++.++|+++.+++++|.++..+|++.+ +..+++++++++|+++.+.
T Consensus 222 ~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~ 272 (291)
T 3mkr_A 222 VLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIK 272 (291)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHH
Confidence 6666666666666666666666666666654 3455566666666665553
No 53
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.58 E-value=1.1e-14 Score=138.87 Aligned_cols=158 Identities=11% Similarity=-0.031 Sum_probs=141.5
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhc-CHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK-KFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g-~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
+....++..++.++ ..|++++|+..|.+++..+|.+..+ +..+|.++...| ++++|+.+|.+++..+|. ..+|.+
T Consensus 53 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 130 (330)
T 3hym_B 53 PFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVS--WFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIA 130 (330)
T ss_dssp TTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHH--HHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHH
T ss_pred CCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHH--HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHH
Confidence 33334444455555 8899999999999999999998777 779999999999 999999999999999998 889999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLA 182 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~ 182 (428)
+|.++...|++++|+..|.+++.++|.+..+++.+|.++...|++++|+..|++++.+.|.+..+ .+++.
T Consensus 131 l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~ 210 (330)
T 3hym_B 131 YGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWK 210 (330)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999998776 35678
Q ss_pred HHHHHHHHHHHhc
Q 014256 183 EVKSLYEKEVFQK 195 (428)
Q Consensus 183 ~a~~~~~~a~~~~ 195 (428)
+|...+++++...
T Consensus 211 ~A~~~~~~a~~~~ 223 (330)
T 3hym_B 211 TAEKWFLDALEKI 223 (330)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8899999998875
No 54
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.57 E-value=1.4e-14 Score=119.87 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 155 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg 155 (428)
++.+|..++..|++++|+.+|++++..+|+ +.+|+++|.++..+|++++|+..|++++.++|+++.+++.+|.++..+|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 678999999999999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCCcHH
Q 014256 156 KLKESIEDSEFALRLEPQNQE 176 (428)
Q Consensus 156 ~~~eA~~~~~~al~l~P~~~~ 176 (428)
++++|+..|+++++++|++..
T Consensus 100 ~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 100 NANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred CHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999998754
No 55
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.57 E-value=2.2e-14 Score=128.97 Aligned_cols=126 Identities=19% Similarity=0.146 Sum_probs=114.3
Q ss_pred Cccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCH
Q 014256 46 PSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF 123 (428)
Q Consensus 46 ~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~ 123 (428)
|..+ ..|++++|+..|.+++ +| . +..+..+|.+++..|+|++|+.+|.+++.++|+ ..+|+++|.+|..+|+|
T Consensus 13 g~~~~~~~~~~~A~~~~~~a~--~~-~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~ 87 (213)
T 1hh8_A 13 GVLAADKKDWKGALDAFSAVQ--DP-H--SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKY 87 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHTSS--SC-C--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhCCHHHHHHHHHHHc--CC-C--hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccH
Confidence 3344 7899999999999996 33 3 345889999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 014256 124 QEAEDDCTEALNLDDRYI----------------KAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 176 (428)
Q Consensus 124 ~eA~~~~~~al~l~p~~~----------------~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~ 176 (428)
++|+..|.+++.+.|.+. .+++++|.++..+|++++|+..|++++.+.|++..
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 999999999999888766 99999999999999999999999999999998743
No 56
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.57 E-value=1.9e-14 Score=139.91 Aligned_cols=160 Identities=18% Similarity=0.129 Sum_probs=127.1
Q ss_pred hhhhhcCCCccc-cCCCCcchHH-HHHhhhhcCCCCc--hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 38 LKSAKKPSPSGN-SYSRNYDPVS-HISSSLMNEESTP--DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 38 ~~~a~~~~~~~y-~~g~~~~Ai~-~~~~al~~~p~~~--~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
+.......+.++ ..|+|++|+. .|.+++...|.++ .+..++.+|.+++..|+|++|+.+|.+++..+|. ..++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 103 (368)
T 1fch_A 24 LEEMAKRDAEAHPWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQY 103 (368)
T ss_dssp ----------------------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHH
T ss_pred HHHHHcCCchhhHHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 333334444455 7899999999 9999999988764 2334789999999999999999999999999998 899999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH---------------
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI--------------- 177 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~--------------- 177 (428)
+|.++..+|++++|+..|.+++.++|+++.+++.+|.++..+|++++|+..|++++.+.|.+...
T Consensus 104 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 1fch_A 104 LGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGP 183 (368)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC-------------
T ss_pred HHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccH
Confidence 99999999999999999999999999999999999999999999999999999999999976543
Q ss_pred ----------HHHHHHHHHHHHHHHHhchh
Q 014256 178 ----------KKQLAEVKSLYEKEVFQKAS 197 (428)
Q Consensus 178 ----------~~~l~~a~~~~~~a~~~~~~ 197 (428)
.+++.+|...|.+++...|.
T Consensus 184 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 213 (368)
T 1fch_A 184 SKRILGSLLSDSLFLEVKELFLAAVRLDPT 213 (368)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHhhcccHHHHHHHHHHHHHhCcC
Confidence 36788899999998888776
No 57
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.57 E-value=2.4e-14 Score=137.63 Aligned_cols=162 Identities=15% Similarity=0.067 Sum_probs=124.3
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC---c-HHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP---T-AVAYA 111 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p---~-~~~~~ 111 (428)
+...++..+|.+| ..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++..+| + ..++.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 112 (359)
T 3ieg_A 35 DNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAA--RLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAES 112 (359)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchH--HHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHH
Confidence 3344555566666 7788888888888888888877655 66888888888888888888888888888 6 55555
Q ss_pred HH------------HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH--
Q 014256 112 NR------------AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI-- 177 (428)
Q Consensus 112 nl------------a~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~-- 177 (428)
.+ |.++...|++++|+..+.+++..+|.++.++..+|.++..+|++++|+..+++++.+.|.+..+
T Consensus 113 ~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3ieg_A 113 QLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFY 192 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 55 6788888888888888888888888888888888888888888888888888888888887766
Q ss_pred --------HHHHHHHHHHHHHHHHhchhhhH
Q 014256 178 --------KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 178 --------~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
.+++.+|...+++++...|....
T Consensus 193 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 223 (359)
T 3ieg_A 193 KISTLYYQLGDHELSLSEVRECLKLDQDHKR 223 (359)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCccchH
Confidence 34566677777777766655443
No 58
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.57 E-value=1.6e-14 Score=138.91 Aligned_cols=156 Identities=18% Similarity=0.084 Sum_probs=140.1
Q ss_pred CCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhc
Q 014256 44 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 121 (428)
Q Consensus 44 ~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~ 121 (428)
.+|..+ ..|++++|+..|.+++..+|.+..+ +..+|.+++..|++++|+.+|.+++..+|+ ..++..+|.++...|
T Consensus 8 ~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 85 (359)
T 3ieg_A 8 ELGKKLLAAGQLADALSQFHAAVDGDPDNYIA--YYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQG 85 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcccHHH--HHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcC
Confidence 344555 8899999999999999999988766 789999999999999999999999999998 899999999999999
Q ss_pred CHHHHHHHHHHHHhcCC---CCHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHhhCCCcHHH---------
Q 014256 122 RFQEAEDDCTEALNLDD---RYIKAYSRR------------ATARKELGKLKESIEDSEFALRLEPQNQEI--------- 177 (428)
Q Consensus 122 ~~~eA~~~~~~al~l~p---~~~~a~~~l------------g~~~~~lg~~~eA~~~~~~al~l~P~~~~~--------- 177 (428)
++++|+..|.+++.++| ++..++..+ |.++...|++++|+..|++++...|.+..+
T Consensus 86 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3ieg_A 86 KLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFI 165 (359)
T ss_dssp CHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 99999999999999999 898888877 799999999999999999999999998876
Q ss_pred -HHHHHHHHHHHHHHHHhchhhhHh
Q 014256 178 -KKQLAEVKSLYEKEVFQKASKTLE 201 (428)
Q Consensus 178 -~~~l~~a~~~~~~a~~~~~~~~~~ 201 (428)
.+++.+|...+.+++...|.....
T Consensus 166 ~~~~~~~A~~~~~~~~~~~~~~~~~ 190 (359)
T 3ieg_A 166 KEGEPRKAISDLKAASKLKSDNTEA 190 (359)
T ss_dssp HTTCHHHHHHHHHHHHTTCSCCHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCHHH
Confidence 345677888888888877766543
No 59
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.57 E-value=1.1e-14 Score=133.37 Aligned_cols=127 Identities=16% Similarity=0.077 Sum_probs=113.8
Q ss_pred cCCCCcchHHHHHhhhhcCCCCch-HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc----HHHHHHHHHHHHH-----
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLK----- 119 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~-a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~nla~~~~~----- 119 (428)
..|++++|+..|++++...|.... ...++.+|.+++..|+|++|+..|++++..+|+ +.+++.+|.++..
T Consensus 16 ~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~ 95 (225)
T 2yhc_A 16 QDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSA 95 (225)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhh
Confidence 789999999999999999887643 345889999999999999999999999999997 3589999999987
Q ss_pred -------------hcCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHh
Q 014256 120 -------------LRRFQEAEDDCTEALNLDDRYIKAY-----------------SRRATARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 120 -------------~~~~~eA~~~~~~al~l~p~~~~a~-----------------~~lg~~~~~lg~~~eA~~~~~~al~ 169 (428)
+|++++|+..|.+++..+|++..++ +.+|.++...|++.+|+..|+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 175 (225)
T 2yhc_A 96 LQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLR 175 (225)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 5789999999999999999987554 6789999999999999999999999
Q ss_pred hCCCcHH
Q 014256 170 LEPQNQE 176 (428)
Q Consensus 170 l~P~~~~ 176 (428)
..|+++.
T Consensus 176 ~~p~~~~ 182 (225)
T 2yhc_A 176 DYPDTQA 182 (225)
T ss_dssp HSTTSHH
T ss_pred HCcCCCc
Confidence 9999864
No 60
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.56 E-value=2.3e-14 Score=117.39 Aligned_cols=128 Identities=28% Similarity=0.389 Sum_probs=115.0
Q ss_pred CCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcC
Q 014256 45 SPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRR 122 (428)
Q Consensus 45 ~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~ 122 (428)
++..| ..|++++|+..|.+++..+|....+ +..+|.++...|++++|+.+|.+++...|. ..++.++|.++...|+
T Consensus 7 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (136)
T 2fo7_A 7 LGNAYYKQGDYDEAIEYYQKALELDPRSAEA--WYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD 84 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHcCCcchhH--HHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcC
Confidence 34444 6789999999999999998876655 778999999999999999999999999988 8889999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 014256 123 FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 123 ~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~ 174 (428)
+++|+..+.+++..+|.+..+++.+|.++...|++++|...+++++.++|++
T Consensus 85 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 85 YDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999999999999999998863
No 61
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.56 E-value=1.8e-13 Score=109.78 Aligned_cols=112 Identities=32% Similarity=0.524 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
+..++.+|..++..|+|++|+.+|.+++..+|. ..++.++|.++..+|++++|+..+.+++.++|+++.+++++|.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 445889999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014256 153 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 185 (428)
Q Consensus 153 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 185 (428)
.+|++++|...|++++.++|++..+...+..+.
T Consensus 84 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 84 FLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999998877666553
No 62
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.55 E-value=8.1e-15 Score=136.43 Aligned_cols=140 Identities=11% Similarity=0.005 Sum_probs=91.9
Q ss_pred hhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHH
Q 014256 38 LKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEEST-PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRA 114 (428)
Q Consensus 38 ~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~-~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla 114 (428)
...++..++.+| ..|++++|+..|.+++...++. ..+..+..+|.++...|++++|+.+|.+++..+|. ..+|.++|
T Consensus 36 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 115 (272)
T 3u4t_A 36 SPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIG 115 (272)
T ss_dssp CSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 334555555555 6677777777777777632111 11333567777777777777777777777777776 66677777
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 115 MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 115 ~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
.+|..+|++++|+..|++++.++|.++.+++.+|......+++++|+..|++++.++|++..+
T Consensus 116 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~ 178 (272)
T 3u4t_A 116 SYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIG 178 (272)
T ss_dssp HHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 777777777777777777777777777777777733444457777777777777777776554
No 63
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.55 E-value=3.2e-14 Score=123.42 Aligned_cols=135 Identities=17% Similarity=0.110 Sum_probs=125.2
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHH
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMA 116 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~ 116 (428)
..++..++..| ..|++++|+..|.+++...|....+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 119 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKV--ATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVA 119 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHH--HHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHH
Confidence 44555566666 8999999999999999999987766 779999999999999999999999999998 8899999999
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 014256 117 YLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 175 (428)
Q Consensus 117 ~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~ 175 (428)
+...|++++|+..+.+++..+|.++.+++.+|.++...|++++|...+++++.+.|++.
T Consensus 120 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 120 LDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 99999999999999999999999999999999999999999999999999999988764
No 64
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.54 E-value=3e-14 Score=132.93 Aligned_cols=141 Identities=15% Similarity=0.090 Sum_probs=124.4
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCc-hHHHHHHHHHHHHH--------hcCHHHHHHHHHHHHccCCc-H
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP-DATSEKELGNECFK--------QKKFKEAIDCYSRSIALSPT-A 107 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~-~a~~~~~lg~~~~~--------~g~~~~Ai~~y~~al~~~p~-~ 107 (428)
..++..+|.+| ..|++++|+..|++++...|.+. ....++.+|.+++. .|++++|+..|++++..+|+ .
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 45666677777 89999999999999999988653 34558899999999 99999999999999999997 3
Q ss_pred ---HHH--------------HHHHHHHHHhcCHHHHHHHHHHHHhcCCC---CHHHHHHHHHHHHHc----------CCH
Q 014256 108 ---VAY--------------ANRAMAYLKLRRFQEAEDDCTEALNLDDR---YIKAYSRRATARKEL----------GKL 157 (428)
Q Consensus 108 ---~~~--------------~nla~~~~~~~~~~eA~~~~~~al~l~p~---~~~a~~~lg~~~~~l----------g~~ 157 (428)
.+. +++|.+|..+|+|++|+..|++++..+|+ .+.+++.+|.++..+ |++
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~ 211 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERY 211 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchH
Confidence 233 88999999999999999999999999998 567999999999988 999
Q ss_pred HHHHHHHHHHHhhCCCcHHHHH
Q 014256 158 KESIEDSEFALRLEPQNQEIKK 179 (428)
Q Consensus 158 ~eA~~~~~~al~l~P~~~~~~~ 179 (428)
++|+..|++++...|+++.+..
T Consensus 212 ~~A~~~~~~~~~~~p~~~~~~~ 233 (261)
T 3qky_A 212 RRAVELYERLLQIFPDSPLLRT 233 (261)
T ss_dssp HHHHHHHHHHHHHCTTCTHHHH
T ss_pred HHHHHHHHHHHHHCCCChHHHH
Confidence 9999999999999999976543
No 65
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.54 E-value=3.7e-13 Score=115.26 Aligned_cols=112 Identities=37% Similarity=0.654 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 151 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~ 151 (428)
.+..+..+|..++..|+|++|+.+|.+++..+|. ..++.++|.++..+|+|++|+..+.+++.++|.++.+++++|.++
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 3455889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 152 KELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 152 ~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
..+|++++|+..|++++.++|++..+...+..+
T Consensus 92 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~ 124 (166)
T 1a17_A 92 MALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 124 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999999999999999998876544444
No 66
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=2.2e-13 Score=114.39 Aligned_cols=111 Identities=32% Similarity=0.511 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRAT 149 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~ 149 (428)
+..++.+|..++..|+|++|+.+|++++..+|+ ..+|.++|.+|..+|+|++|+..|.+++.++|+++.+++++|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 444889999999999999999999999999997 6789999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 150 ARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 150 ~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
++..+|++++|+..|++++.++|++..++..+..+
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 99999999999999999999999999887665544
No 67
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.54 E-value=5.2e-14 Score=130.78 Aligned_cols=161 Identities=17% Similarity=0.067 Sum_probs=134.9
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRA 114 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla 114 (428)
....++..+|.+| ..|++++|+..|.+++..+|.+..+ +..+|.++...|+|++|+.+|.+++.++|. ..++.++|
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEV--FNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHH--HHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 3445666777777 8999999999999999999987776 789999999999999999999999999998 89999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc--------------------
Q 014256 115 MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN-------------------- 174 (428)
Q Consensus 115 ~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~-------------------- 174 (428)
.+|..+|++++|+..+.+++.++|++...+...+.+ ...|++++|+..+.+++...|.+
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 197 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLM 197 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHH
Confidence 999999999999999999999999998766655544 55688888888887777766543
Q ss_pred -----------------HHH----------HHHHHHHHHHHHHHHHhchhhhH
Q 014256 175 -----------------QEI----------KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 175 -----------------~~~----------~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
..+ .+++.+|...|++++..+|....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 198 ERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTCH
T ss_pred HHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCchhHH
Confidence 111 35678888899999888876543
No 68
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.53 E-value=6.2e-14 Score=140.18 Aligned_cols=160 Identities=11% Similarity=0.130 Sum_probs=132.2
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHH----
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANR---- 113 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nl---- 113 (428)
.++..++.+| ..|++++|+..|.+++..+|.+..+ +..+|.+|...|++++|+.+|.+++..+|+ ...+..+
T Consensus 178 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~ 255 (450)
T 2y4t_A 178 ELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEA--FYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVK 255 (450)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHH
Confidence 3444455556 7899999999999999988887666 779999999999999999999999999887 5555444
Q ss_pred --------HHHHHHhcCHHHHHHHHHHHHhcCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----
Q 014256 114 --------AMAYLKLRRFQEAEDDCTEALNLDDRYI----KAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI---- 177 (428)
Q Consensus 114 --------a~~~~~~~~~~eA~~~~~~al~l~p~~~----~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~---- 177 (428)
|.++...|++++|+..|.+++.++|+++ .++..+|.++..+|++++|+..+++++.++|++..+
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l 335 (450)
T 2y4t_A 256 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDR 335 (450)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 8899999999999999999999999884 478888999999999999999999999999988766
Q ss_pred ------HHHHHHHHHHHHHHHHhchhhhHh
Q 014256 178 ------KKQLAEVKSLYEKEVFQKASKTLE 201 (428)
Q Consensus 178 ------~~~l~~a~~~~~~a~~~~~~~~~~ 201 (428)
.+++.+|...|++++.++|.+...
T Consensus 336 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 365 (450)
T 2y4t_A 336 AEAYLIEEMYDEAIQDYETAQEHNENDQQI 365 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTSSSCHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcchHHH
Confidence 355778888888888888776553
No 69
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.53 E-value=1.2e-13 Score=124.86 Aligned_cols=111 Identities=20% Similarity=0.167 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH----------------HHHHHHHhcCHHHHHHHHHHHHhcC
Q 014256 75 TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN----------------RAMAYLKLRRFQEAEDDCTEALNLD 137 (428)
Q Consensus 75 ~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n----------------la~~~~~~~~~~eA~~~~~~al~l~ 137 (428)
..+...|..++..|+|++|+.+|++++.++|+ +.+|++ +|.+|..+|++++|+..|++++.++
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 84 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA 84 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 34778999999999999999999999999998 888888 9999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014256 138 DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 185 (428)
Q Consensus 138 p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 185 (428)
|+++.+++++|.++..+|++++|+..|+++++++|++..++..+..+.
T Consensus 85 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~ 132 (208)
T 3urz_A 85 PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYY 132 (208)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999877766543
No 70
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.53 E-value=1.1e-13 Score=132.40 Aligned_cols=154 Identities=10% Similarity=-0.037 Sum_probs=99.0
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHH--H
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRA--M 115 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla--~ 115 (428)
.+...+|..| ..|++++|+..|++ |.+..+ +..+|.++.+.|++++|+..|++++..+|+ .......| .
T Consensus 102 ~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~--~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~ 174 (291)
T 3mkr_A 102 TFLLMAASIYFYDQNPDAALRTLHQ-----GDSLEC--MAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVS 174 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHH
Confidence 3344444444 56666666666665 444444 556777777777777777777777777776 32222222 2
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHH----------H-H
Q 014256 116 AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA----------E-V 184 (428)
Q Consensus 116 ~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~----------~-a 184 (428)
.+...|++++|+..|++++..+|+++.+++++|.++..+|++++|...|++++.++|+++.++.++. + +
T Consensus 175 l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 175 LAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 2223367777777777777777777777777777777777777777777777777777777643332 2 4
Q ss_pred HHHHHHHHHhchhhhH
Q 014256 185 KSLYEKEVFQKASKTL 200 (428)
Q Consensus 185 ~~~~~~a~~~~~~~~~ 200 (428)
..++++++..+|.++.
T Consensus 255 ~~~~~~~~~~~P~~~~ 270 (291)
T 3mkr_A 255 NRYLSQLKDAHRSHPF 270 (291)
T ss_dssp HHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhCCCChH
Confidence 4566677777766654
No 71
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.52 E-value=2.3e-14 Score=136.54 Aligned_cols=143 Identities=8% Similarity=-0.004 Sum_probs=126.5
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++...+..+ ..|++++|+..|++++..+|++..+ +..+|.++...|++++|+..|++++..+|+ ...+.+.+..+
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a--~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEI--GLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHH--HHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhH--HHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 3343444445 8899999999999999999998877 779999999999999999999999999998 66677788889
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc--HHHHHHHHHH
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN--QEIKKQLAEV 184 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~--~~~~~~l~~a 184 (428)
...+++++|+..+.+++.++|+++.+++++|.++...|++++|+..|.++++++|++ ..++..+..+
T Consensus 196 ~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~ 264 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEI 264 (287)
T ss_dssp HHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHH
T ss_pred HhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 6665554443
No 72
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.52 E-value=2.5e-13 Score=111.67 Aligned_cols=113 Identities=32% Similarity=0.533 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 151 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~ 151 (428)
....++.+|..++..|+|++|+.+|.+++..+|. ..+++++|.++..+|++++|+..|++++.++|.++.+++++|.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 3455889999999999999999999999999998 899999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014256 152 KELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 185 (428)
Q Consensus 152 ~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 185 (428)
..+|++++|+..|++++.++|.+..+...+..+.
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 128 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCM 128 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999999999999888776665543
No 73
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.52 E-value=4.4e-14 Score=141.30 Aligned_cols=158 Identities=18% Similarity=0.090 Sum_probs=96.1
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..++..| ..|++++|+..|++++..+|.+..+ +..+|.+++..|++++|+.+|.+++..+|+ ..++.++|.+|
T Consensus 27 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~--~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 104 (450)
T 2y4t_A 27 EKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIA--YYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLL 104 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3444444444 5666666666666666666655444 556666666666666666666666666666 66666666666
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCH---HHHHHH------------HHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH----
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYI---KAYSRR------------ATARKELGKLKESIEDSEFALRLEPQNQEIK---- 178 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~---~a~~~l------------g~~~~~lg~~~eA~~~~~~al~l~P~~~~~~---- 178 (428)
..+|++++|+..|.+++.++|.+. .++..+ |.++...|++++|+..|++++.+.|.+..+.
T Consensus 105 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 184 (450)
T 2y4t_A 105 LKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRA 184 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 666666666666666666666665 444333 4456666666666666666666666665542
Q ss_pred ------HHHHHHHHHHHHHHHhchhhh
Q 014256 179 ------KQLAEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 179 ------~~l~~a~~~~~~a~~~~~~~~ 199 (428)
+++.+|...|.+++..+|...
T Consensus 185 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 211 (450)
T 2y4t_A 185 ECFIKEGEPRKAISDLKAASKLKNDNT 211 (450)
T ss_dssp HHHHHTTCGGGGHHHHHHHHHHHCSCH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 234445555555555554443
No 74
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.52 E-value=3.9e-14 Score=144.78 Aligned_cols=156 Identities=15% Similarity=0.136 Sum_probs=113.7
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHh
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 120 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~ 120 (428)
..++..| ..|++++|+..|.+++..+|.+..+ +..+|.++...|+|++|+.+|.+++..+|+ ..++.++|.++..+
T Consensus 280 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 280 IFLALTLADKENSQEFFKFFQKAVDLNPEYPPT--YYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3444445 6777777777777777777776555 667777777777777777777777777777 67777777777777
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------------H------
Q 014256 121 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------------K------ 178 (428)
Q Consensus 121 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------------~------ 178 (428)
|++++|+..|.+++..+|+++.+++.+|.++...|++++|+..|++++.+.|++... .
T Consensus 358 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 437 (537)
T 3fp2_A 358 GKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPT 437 (537)
T ss_dssp TCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccch
Confidence 777777777777777777777777777777777777777777777777776643211 2
Q ss_pred ----HHHHHHHHHHHHHHHhchhhhH
Q 014256 179 ----KQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 179 ----~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
+++.+|...|++++..+|....
T Consensus 438 ~~~~~~~~~A~~~~~~a~~~~p~~~~ 463 (537)
T 3fp2_A 438 QLDEEKFNAAIKLLTKACELDPRSEQ 463 (537)
T ss_dssp -CCHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred hhhHhHHHHHHHHHHHHHHhCCCCHH
Confidence 6677777777777777766554
No 75
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.51 E-value=1e-13 Score=144.00 Aligned_cols=129 Identities=12% Similarity=0.016 Sum_probs=74.5
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..++..| ..|++++|+..|++++..+|.+..+ |..+|.+|.+.|++++|+.+|++++...|. ..+|.++|.+|
T Consensus 374 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 374 VTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPA--WIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 3344444444 5566666666666666555554444 445566666666666666666666555554 55555556666
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
.+.|++++|+..|.+++.++|.++.+|..+|.++...|++++|+..|++++.+
T Consensus 452 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 452 MQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLL 504 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 66666666666666666555555555555666666666666666666555555
No 76
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.51 E-value=5.6e-14 Score=133.66 Aligned_cols=122 Identities=15% Similarity=0.176 Sum_probs=117.9
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 128 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~ 128 (428)
..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++..+|+ ..++.++|.++...|++++|+.
T Consensus 150 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 227 (327)
T 3cv0_A 150 APNEYRECRTLLHAALEMNPNDAQL--HASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALD 227 (327)
T ss_dssp SHHHHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcccHHHHHHHHHHHHhhCCCCHHH--HHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 7889999999999999999987666 789999999999999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 014256 129 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 173 (428)
Q Consensus 129 ~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~ 173 (428)
.|.+++.++|++..+++.+|.++..+|++++|+..|++++.+.|.
T Consensus 228 ~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 228 AYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999998
No 77
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.51 E-value=8.9e-15 Score=139.58 Aligned_cols=153 Identities=8% Similarity=-0.081 Sum_probs=83.1
Q ss_pred Cccc-cCCCCcchHHHHHhhhhcCCC----CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HHHHHHH
Q 014256 46 PSGN-SYSRNYDPVSHISSSLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANR 113 (428)
Q Consensus 46 ~~~y-~~g~~~~Ai~~~~~al~~~p~----~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~nl 113 (428)
+..| ..|++++|+.+|.+++.+.+. ...+..+.++|.+|...|+|++|+.+|++++.+.+. +.++.++
T Consensus 44 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~l 123 (292)
T 1qqe_A 44 ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFEL 123 (292)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3344 556666666666666555321 112444556666666666666666666666665432 2355666
Q ss_pred HHHHHHh-cCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH-------H--
Q 014256 114 AMAYLKL-RRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE-------I-- 177 (428)
Q Consensus 114 a~~~~~~-~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~-------~-- 177 (428)
|.+|... |++++|+..|.+|+.+.|.+ ..++.++|.++..+|+|++|+..|++++.+.|++.. .
T Consensus 124 g~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 203 (292)
T 1qqe_A 124 GEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFL 203 (292)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHH
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHH
Confidence 6666664 66666666666666665533 345566666666666666666666666666554321 0
Q ss_pred --------HHHHHHHHHHHHHHHHhchhh
Q 014256 178 --------KKQLAEVKSLYEKEVFQKASK 198 (428)
Q Consensus 178 --------~~~l~~a~~~~~~a~~~~~~~ 198 (428)
.+++.+|+..|++++.++|..
T Consensus 204 ~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 204 KKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 123455556666665555543
No 78
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.50 E-value=3e-13 Score=133.85 Aligned_cols=116 Identities=29% Similarity=0.462 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHc----------------cCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIA----------------LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL 136 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~----------------~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l 136 (428)
+..++.+|+.+++.|+|++|+.+|++++. .+|. ..+|.++|.||+++|+|++|+.+|++++.+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 44588999999999999999999999998 6676 789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 137 DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 137 ~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
+|+++.+++++|.++..+|++++|+.+|+++++++|++..++..+..+.....
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~ 355 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIK 355 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888777766544
No 79
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.50 E-value=5.4e-14 Score=133.73 Aligned_cols=158 Identities=10% Similarity=0.124 Sum_probs=98.1
Q ss_pred hhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHc--------------
Q 014256 38 LKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA-------------- 102 (428)
Q Consensus 38 ~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~-------------- 102 (428)
...++..++.++ ..|++++|+..|.+++..+|....+ +..+|.++...|++++|+.+|.+++.
T Consensus 54 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (327)
T 3cv0_A 54 REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAV--HAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQ 131 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC------
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhH
Confidence 334444455555 5666666666666666666655444 45666666666665555555555544
Q ss_pred -----------------------------------cCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Q 014256 103 -----------------------------------LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 146 (428)
Q Consensus 103 -----------------------------------~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~ 146 (428)
.+|. ..++..+|.++...|++++|+..+.+++..+|+++.++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 211 (327)
T 3cv0_A 132 ADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNK 211 (327)
T ss_dssp --------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 4444 5556666777777777777777777777777777777777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHHHHHHHHhchh
Q 014256 147 RATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKAS 197 (428)
Q Consensus 147 lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~~a~~~~~~ 197 (428)
+|.++...|++++|+..|++++.+.|++..+ .+++.+|...+++++...|.
T Consensus 212 l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 212 LGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 7777777777777777777777777766554 23455566666666655544
No 80
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.50 E-value=8.1e-13 Score=107.76 Aligned_cols=113 Identities=37% Similarity=0.540 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
+..+..+|..++..|+|++|+.+|.+++..+|+ ..++.++|.++...|++++|+..+.+++.++|+++.+++.+|.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS 91 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH
Confidence 445889999999999999999999999999998 8899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014256 153 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 186 (428)
Q Consensus 153 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~ 186 (428)
.+|++++|+..|++++.+.|++..+...+..+..
T Consensus 92 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 125 (131)
T 2vyi_A 92 SLNKHVEAVAYYKKALELDPDNETYKSNLKIAEL 125 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence 9999999999999999999999887766665543
No 81
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.50 E-value=2.3e-14 Score=136.68 Aligned_cols=139 Identities=12% Similarity=0.069 Sum_probs=114.4
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHh-cCHHHHHHHHHHHHccCCc-------
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQ-KKFKEAIDCYSRSIALSPT------- 106 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~----~a~~~~~lg~~~~~~-g~~~~Ai~~y~~al~~~p~------- 106 (428)
.++..+|.+| ..|++++|+.+|++++.+.+... .+..+.++|.+|... |++++|+.+|++++.+.|.
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~ 157 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALS 157 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHH
Confidence 3445666667 88999999999999999876432 245688999999996 9999999999999998763
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK-------AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 178 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~-------a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~ 178 (428)
..++.++|.+|..+|+|++|+..|++++.+.|.+.. +++++|.++..+|++++|+..|++++.++|+.....
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 236 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSR 236 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC--------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcH
Confidence 457899999999999999999999999999987643 689999999999999999999999999999988753
No 82
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.50 E-value=7.7e-13 Score=108.84 Aligned_cols=103 Identities=16% Similarity=0.153 Sum_probs=97.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCCc-H---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHH
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSPT-A---VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY---IKAYSRRAT 149 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~---~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~---~~a~~~lg~ 149 (428)
++.+|.+++..|+|++|+..|.+++..+|+ . .+++++|.++..+|+|++|+..|.+++..+|++ +.+++.+|.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHH
Confidence 678999999999999999999999999987 4 799999999999999999999999999999999 899999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCcHHHHH
Q 014256 150 ARKELGKLKESIEDSEFALRLEPQNQEIKK 179 (428)
Q Consensus 150 ~~~~lg~~~eA~~~~~~al~l~P~~~~~~~ 179 (428)
++..+|++++|+..|++++...|++..+..
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~ 114 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQYPGSDAARV 114 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTSHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCChHHHH
Confidence 999999999999999999999999887644
No 83
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.50 E-value=2.9e-14 Score=122.99 Aligned_cols=113 Identities=12% Similarity=-0.020 Sum_probs=101.6
Q ss_pred hcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 014256 87 QKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSE 165 (428)
Q Consensus 87 ~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~ 165 (428)
.+++-.+-..|.+++.++|+ ..+++++|.+++.+|+|++|+..|++++.++|.++.+|+++|.++..+|+|++|+..|+
T Consensus 15 l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 15 VIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 33444455678888999998 88999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcHHH----------HHHHHHHHHHHHHHHHhchhhh
Q 014256 166 FALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 166 ~al~l~P~~~~~----------~~~l~~a~~~~~~a~~~~~~~~ 199 (428)
+++.++|+++.+ .+++++|+..|++++.+.|...
T Consensus 95 ~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 95 VAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999877 4567899999999999887654
No 84
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.49 E-value=4.9e-14 Score=137.52 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=115.9
Q ss_pred hhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCch-------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHcc
Q 014256 38 LKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD-------------ATSEKELGNECFKQKKFKEAIDCYSRSIAL 103 (428)
Q Consensus 38 ~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~-------------a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~ 103 (428)
...++..+|..| ..|++++|+..|.+++..+|.+.. +..+.++|.+|++.|+|++|+.+|++++.+
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344555666666 889999999999999999998731 344889999999999999999999999999
Q ss_pred CCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHH-HHHHHHHH
Q 014256 104 SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES-IEDSEFAL 168 (428)
Q Consensus 104 ~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA-~~~~~~al 168 (428)
+|+ ..+|+++|.+|..+|+|++|+.+|++++.++|++..++..+|.++..+|++++| ...|.+++
T Consensus 226 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 226 DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 999999999999999999999999999999999999999999999999999888 44555544
No 85
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.49 E-value=7.8e-13 Score=108.03 Aligned_cols=115 Identities=25% Similarity=0.431 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY-------IKAYS 145 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~-------~~a~~ 145 (428)
+..++.+|..++..|+|++|+.+|.+++..+|. ..++.++|.+|..+|++++|+..|.+++.++|.+ +.+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 345889999999999999999999999999998 8999999999999999999999999999999887 99999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 146 RRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 146 ~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
++|.++..+|++++|+..|++++.+.| +......+..+...+.
T Consensus 84 ~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 84 RIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 5777666666655443
No 86
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.49 E-value=2.1e-13 Score=108.49 Aligned_cols=105 Identities=20% Similarity=0.270 Sum_probs=99.4
Q ss_pred CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CHHHH
Q 014256 68 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR--YIKAY 144 (428)
Q Consensus 68 ~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~--~~~a~ 144 (428)
+|.+..+ +..+|.+++..|+|++|+.+|.+++..+|. ..+++++|.++..+|++++|+..+++++.++|. +..++
T Consensus 2 ~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 2 VDQNPEE--YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCSSTTG--GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCCcHHH--HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 4565556 779999999999999999999999999998 889999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHhhCCCc
Q 014256 145 SRRATARKEL-GKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 145 ~~lg~~~~~l-g~~~eA~~~~~~al~l~P~~ 174 (428)
+.+|.++..+ |++++|+..+++++...|++
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 80 AAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9999999999 99999999999999999975
No 87
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.49 E-value=6.4e-14 Score=143.21 Aligned_cols=155 Identities=16% Similarity=0.167 Sum_probs=139.4
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYL 118 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~ 118 (428)
++..+|..+ ..|++++|+..|.+++..+|. ..+ +..+|.++...|++++|+.+|.+++..+|+ +.++.++|.++.
T Consensus 245 ~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~~~--~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 321 (537)
T 3fp2_A 245 ALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNS--YIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF 321 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHH--HHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-chH--HHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 345555666 889999999999999999997 444 889999999999999999999999999998 899999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHHH
Q 014256 119 KLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAEVKSLY 188 (428)
Q Consensus 119 ~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~ 188 (428)
..|++++|+..|.+++.++|.++.+++.+|.++...|++++|+..|++++.+.|++..+ .+++.+|...|
T Consensus 322 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 401 (537)
T 3fp2_A 322 ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQY 401 (537)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998766 34567788888
Q ss_pred HHHHHhchhh
Q 014256 189 EKEVFQKASK 198 (428)
Q Consensus 189 ~~a~~~~~~~ 198 (428)
++++...|..
T Consensus 402 ~~a~~~~~~~ 411 (537)
T 3fp2_A 402 DIAKRLEEVQ 411 (537)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHcCCcc
Confidence 8887776543
No 88
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.49 E-value=4.2e-14 Score=134.42 Aligned_cols=100 Identities=36% Similarity=0.550 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 014256 75 TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 153 (428)
Q Consensus 75 ~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~ 153 (428)
..++.+|+.++..|+|++|+.+|.+++..+|+ +.+|+++|.+|..+|+|++|+.+|++++.++|+++.+++++|.++..
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE 84 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34889999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhhCCCc
Q 014256 154 LGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 154 lg~~~eA~~~~~~al~l~P~~ 174 (428)
+|++++|+..|++++.++|++
T Consensus 85 ~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 85 MESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999865
No 89
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.49 E-value=1.4e-13 Score=143.39 Aligned_cols=139 Identities=14% Similarity=0.011 Sum_probs=129.0
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANR 113 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nl 113 (428)
++...++..+|..| ..|++++|+..|++++..+|.+..+ +..+|.+|...|++++|+.+|+++++++|+ ..+++++
T Consensus 20 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 20 PQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEA--VARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp -CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 44556667777777 8899999999999999999998776 789999999999999999999999999998 8999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc---CCHHHHHHHHHHHHhhCCCcHH
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL---GKLKESIEDSEFALRLEPQNQE 176 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~l---g~~~eA~~~~~~al~l~P~~~~ 176 (428)
|.+|..+|++++|+..|++++.++|++..+++++|.++..+ |++++|...|+++++.+|.+..
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 163 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVE 163 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccC
Confidence 99999999999999999999999999999999999999999 9999999999999999998643
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.49 E-value=1.5e-13 Score=117.77 Aligned_cols=127 Identities=13% Similarity=0.123 Sum_probs=110.8
Q ss_pred hcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHH
Q 014256 42 KKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 119 (428)
Q Consensus 42 ~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~ 119 (428)
+..+|..+ ..|++++|+..|.+++..+|.+..+ +..+|.++...|+|++|+.+|.+++..+|. ..+++++|.++..
T Consensus 16 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~ 93 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIKFYSQAIELNPSNAIY--YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMA 93 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 34455555 7899999999999999999987766 789999999999999999999999999998 8999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH--HHHcCCHHHHHHHHHHHHhh
Q 014256 120 LRRFQEAEDDCTEALNLDDRYIKAYSRRATA--RKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 120 ~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~--~~~lg~~~eA~~~~~~al~l 170 (428)
+|++++|+..|.+++.++|.+..++..++.+ +...|++++|+..+.++..+
T Consensus 94 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 94 LGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999999999999999999999888555544 77778888888777765443
No 91
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.48 E-value=7.4e-14 Score=141.58 Aligned_cols=134 Identities=12% Similarity=0.095 Sum_probs=76.6
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHH
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMA 116 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~ 116 (428)
..++..++.+| ..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.+
T Consensus 270 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 347 (514)
T 2gw1_A 270 VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSV--YYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACL 347 (514)
T ss_dssp HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHH--HHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHH
Confidence 34444444544 5555666666666666555555444 445555555556666666666655555555 5555555555
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 014256 117 YLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 117 ~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~ 174 (428)
+...|++++|+..+.+++..+|.++.+++.+|.++...|++++|+..|++++.+.|++
T Consensus 348 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 405 (514)
T 2gw1_A 348 AYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKL 405 (514)
T ss_dssp TTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 5555555555555555555555555555555555555555555555555555555544
No 92
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.48 E-value=4.1e-14 Score=138.23 Aligned_cols=112 Identities=30% Similarity=0.459 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-H-----------------HHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A-----------------VAYANRAMAYLKLRRFQEAEDDCTEAL 134 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~-----------------~~~~nla~~~~~~~~~~eA~~~~~~al 134 (428)
.+..++.+|+.++..|+|++|+.+|.+++.+.|+ . .+|+|+|.||+++|+|++|+.+|.+++
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455889999999999999999999999999998 4 389999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 135 NLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 135 ~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
.++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++..+..+
T Consensus 258 ~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l 307 (338)
T 2if4_A 258 TEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRAL 307 (338)
T ss_dssp HHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---------------
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998886555443
No 93
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.48 E-value=8.7e-14 Score=122.18 Aligned_cols=123 Identities=11% Similarity=-0.011 Sum_probs=108.4
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHH-HHhcCHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAY-LKLRRFQEAED 128 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~-~~~~~~~eA~~ 128 (428)
..|++++|+..|++++..+|++..+ +..+|.++...|++++|+.+|++++..+|++..+..++.+. ...+...+|+.
T Consensus 18 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~ 95 (176)
T 2r5s_A 18 QQGEHAQALNVIQTLSDELQSRGDV--KLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELK 95 (176)
T ss_dssp HTTCHHHHHHHHHTSCHHHHTSHHH--HHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCcHHH--HHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHH
Confidence 7899999999999999999998877 77999999999999999999999999988644444455443 23345556899
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 014256 129 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 129 ~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~ 174 (428)
.+++++.++|+++.+++.+|.++...|++++|+..|+++++++|+.
T Consensus 96 ~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 96 RLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999999999999975
No 94
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.47 E-value=2.7e-13 Score=140.70 Aligned_cols=158 Identities=12% Similarity=0.033 Sum_probs=138.7
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANR 113 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nl 113 (428)
++...++..++.+| ..|++++|+..|.+++...|.+..+ +..+|..|.+.|++++|+.+|.+++.++|. ..+|+.+
T Consensus 336 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 413 (597)
T 2xpi_A 336 PYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVT--WLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGF 413 (597)
T ss_dssp TTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHH--HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 34445556666666 8899999999999999988887666 778999999999999999999999999988 8899999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH----------HHHHHH
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------KKQLAE 183 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~----------~~~l~~ 183 (428)
|.+|...|++++|+..|++++..+|.+..++..+|.++...|++++|+..|++++.+.|.++.+ .+++++
T Consensus 414 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 493 (597)
T 2xpi_A 414 AHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQT 493 (597)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998766 356788
Q ss_pred HHHHHHHHHHhc
Q 014256 184 VKSLYEKEVFQK 195 (428)
Q Consensus 184 a~~~~~~a~~~~ 195 (428)
|...|++++...
T Consensus 494 A~~~~~~~~~~~ 505 (597)
T 2xpi_A 494 AINHFQNALLLV 505 (597)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 899999888873
No 95
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.3e-13 Score=113.76 Aligned_cols=111 Identities=15% Similarity=0.117 Sum_probs=100.8
Q ss_pred hcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHH
Q 014256 42 KKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 119 (428)
Q Consensus 42 ~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~ 119 (428)
+...|..+ ..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.+++.++|+ ..+|+++|.++..
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~--~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARG--YSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA 84 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 33445555 8899999999999999999998766 889999999999999999999999999999 9999999999999
Q ss_pred hcCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHc
Q 014256 120 LRRFQEAEDDCTEALNLD------DRYIKAYSRRATARKEL 154 (428)
Q Consensus 120 ~~~~~eA~~~~~~al~l~------p~~~~a~~~lg~~~~~l 154 (428)
+|++++|+..|.+++.++ |.+..++..++.+...+
T Consensus 85 ~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 85 VKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 999999999999999999 99999998888877653
No 96
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.47 E-value=5.7e-13 Score=119.59 Aligned_cols=124 Identities=25% Similarity=0.248 Sum_probs=111.7
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
.+..++.+|..++..|+|++|+.+|.+++ +|++.+|+++|.+|..+|++++|+..|.+++.++|.++.+++++|.++.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~ 82 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY 82 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 34457899999999999999999999995 5568899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCcH----------------HH----------HHHHHHHHHHHHHHHHhchhh
Q 014256 153 ELGKLKESIEDSEFALRLEPQNQ----------------EI----------KKQLAEVKSLYEKEVFQKASK 198 (428)
Q Consensus 153 ~lg~~~eA~~~~~~al~l~P~~~----------------~~----------~~~l~~a~~~~~~a~~~~~~~ 198 (428)
.+|++++|+..|++++.+.|.+. .+ .+++.+|...|++++..+|..
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 99999999999999999988765 43 356778889999999888755
No 97
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.46 E-value=3.7e-13 Score=115.97 Aligned_cols=95 Identities=20% Similarity=0.139 Sum_probs=85.4
Q ss_pred HHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 014256 85 FKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF----------QEAEDDCTEALNLDDRYIKAYSRRATARKE 153 (428)
Q Consensus 85 ~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~----------~eA~~~~~~al~l~p~~~~a~~~lg~~~~~ 153 (428)
-+.+.|++|+.+|.++++++|+ +.+|+++|.++..++++ ++|+..|++||+++|++..+|+++|.+|..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567799999999999999998 99999999999999875 599999999999999999999999999998
Q ss_pred cC-----------CHHHHHHHHHHHHhhCCCcHHHHH
Q 014256 154 LG-----------KLKESIEDSEFALRLEPQNQEIKK 179 (428)
Q Consensus 154 lg-----------~~~eA~~~~~~al~l~P~~~~~~~ 179 (428)
+| ++++|+..|++++.++|++...+.
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~ 129 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 129 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHH
Confidence 85 899999999999999999875543
No 98
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.45 E-value=4.8e-12 Score=102.21 Aligned_cols=112 Identities=35% Similarity=0.491 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
+..+..+|.++...|++++|+.+|.+++..+|. ..++.++|.++...|++++|+..+.+++..+|.++.+++.+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 445889999999999999999999999999998 8899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014256 153 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 185 (428)
Q Consensus 153 ~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 185 (428)
..|++++|+..|++++.++|++..+...+..+.
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999999999999998876665543
No 99
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.45 E-value=2e-12 Score=105.57 Aligned_cols=121 Identities=31% Similarity=0.433 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Q 014256 76 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL 154 (428)
Q Consensus 76 ~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~l 154 (428)
.+..+|.++...|++++|+..|.+++..+|. ...+.++|.++...|++++|+..+.+++..+|.+..+++.+|.++...
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHh
Confidence 3778999999999999999999999999988 889999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCCcHHHH----------HHHHHHHHHHHHHHHhch
Q 014256 155 GKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 155 g~~~eA~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~~a~~~~~ 196 (428)
|++++|+..+++++.+.|.+..+. +++.+|...+.+++..+|
T Consensus 83 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 134 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 134 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHST
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCC
Confidence 999999999999999999887653 345667777777766654
No 100
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.45 E-value=2e-13 Score=137.58 Aligned_cols=163 Identities=13% Similarity=0.025 Sum_probs=132.4
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCC-------CCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC-------
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEE-------STPDATSEKELGNECFKQKKFKEAIDCYSRSIALS------- 104 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p-------~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~------- 104 (428)
..+..+|..| ..|++++|+++|++++.+.+ +...+..+.++|.+|+..|+|++|+.+|++++.+.
T Consensus 52 ~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~ 131 (472)
T 4g1t_A 52 TMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY 131 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc
Confidence 4456667777 89999999999999988621 11234458899999999999999999999999863
Q ss_pred -Cc-HHHHHHHHHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH---cCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 105 -PT-AVAYANRAMAYLKLR--RFQEAEDDCTEALNLDDRYIKAYSRRATARKE---LGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 105 -p~-~~~~~nla~~~~~~~--~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~---lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
+. +.++.++|.+++..| +|++|+.+|++++.++|+++.++..+|.++.. .|++++|+..|++++.++|++..+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~ 211 (472)
T 4g1t_A 132 RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYL 211 (472)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHH
T ss_pred chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHH
Confidence 23 788999998888765 69999999999999999999999999988654 577789999999999999998876
Q ss_pred H--------------HHHHHHHHHHHHHHHhchhhhHhh
Q 014256 178 K--------------KQLAEVKSLYEKEVFQKASKTLEK 202 (428)
Q Consensus 178 ~--------------~~l~~a~~~~~~a~~~~~~~~~~~ 202 (428)
. +.+.+|...+++++..+|......
T Consensus 212 ~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~ 250 (472)
T 4g1t_A 212 KVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVL 250 (472)
T ss_dssp HHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHH
Confidence 3 345578888999998888776533
No 101
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.45 E-value=7.4e-14 Score=142.90 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=118.5
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..+|..+ ..|++++|+..|++++..+|.+..+ +.++|.+|...|+|++|+.+|+++++++|+ +.+|+++|.+|
T Consensus 7 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 84 (477)
T 1wao_1 7 EELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIY--YGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 84 (477)
T ss_dssp TTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4566777777 8999999999999999999987766 889999999999999999999999999998 99999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhhCCCc
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA--RKELGKLKESIEDSE-----------FALRLEPQN 174 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~--~~~lg~~~eA~~~~~-----------~al~l~P~~ 174 (428)
..+|++++|+..|+++++++|++..++..++.+ +...|++++|+..++ +++.++|++
T Consensus 85 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 85 MALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 999999999999999999999999999999998 888999999999999 888888765
No 102
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.44 E-value=3.3e-13 Score=110.94 Aligned_cols=118 Identities=17% Similarity=0.155 Sum_probs=107.7
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRA 114 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla 114 (428)
....++..+|..+ ..|++++|+..|++++..+|.+..+ +..+|.++...|++++|+.+|.+++..+|. ..+++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKL--YSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHH--HHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHH--HHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 3445556666666 8999999999999999999987666 889999999999999999999999999998 89999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 014256 115 MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 156 (428)
Q Consensus 115 ~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~ 156 (428)
.++..+|++++|+..+.+++.++|.+..++..++.++..+|+
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999988774
No 103
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.44 E-value=1.7e-13 Score=118.73 Aligned_cols=110 Identities=8% Similarity=0.105 Sum_probs=100.1
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..+|..| ..|++++|+.+|.+++..+|.+..+ +..+|.+|+..|+|++|+.+|.+++.++|+ ..+|+++|.+|
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 89 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIY--LSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLAR 89 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHH--HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3445566666 8899999999999999999998766 889999999999999999999999999999 99999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 151 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~ 151 (428)
..+|++++|+..|.+++.++|++..++++++.+.
T Consensus 90 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 90 FDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999999999999999888877643
No 104
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.43 E-value=1.9e-13 Score=126.85 Aligned_cols=135 Identities=17% Similarity=0.129 Sum_probs=118.7
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcC------CCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc------
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNE------ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL------ 103 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~------p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~------ 103 (428)
....++..+|..| ..|++++|+.+|.+++... .....+..+..+|.++...|++++|+.+|.+++.+
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 120 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG 120 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC
Confidence 3445667788887 8999999999999999873 22234556889999999999999999999999998
Q ss_pred --CCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 014256 104 --SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 171 (428)
Q Consensus 104 --~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l--------~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~ 171 (428)
+|. ..++.++|.+|..+|++++|+..|.+++.+ +|....++..+|.++..+|++++|+..|++++.+.
T Consensus 121 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 121 KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 355 788999999999999999999999999999 77888999999999999999999999999999873
No 105
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.43 E-value=9.9e-13 Score=126.11 Aligned_cols=123 Identities=9% Similarity=-0.029 Sum_probs=58.3
Q ss_pred CCcchHHHHHhhhh-cCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HH-HHHHHHHHHHHhcCHHHHHHH
Q 014256 53 RNYDPVSHISSSLM-NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AV-AYANRAMAYLKLRRFQEAEDD 129 (428)
Q Consensus 53 ~~~~Ai~~~~~al~-~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~-~~~nla~~~~~~~~~~eA~~~ 129 (428)
.+++|+..|++++. .+|++..+ |..+|..+...|++++|+.+|++++.+.|. +. +|.++|.++...|++++|...
T Consensus 79 ~~~~A~~~~~rAl~~~~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~ 156 (308)
T 2ond_A 79 FSDEAANIYERAISTLLKKNMLL--YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMI 156 (308)
T ss_dssp HHHHHHHHHHHHHTTTTTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCcccHHH--HHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHH
Confidence 33444555555554 34444333 444555555555555555555555554444 32 455555555555555555555
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 130 CTEALNLDDRYIKAYSRRATARKE-LGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 130 ~~~al~l~p~~~~a~~~lg~~~~~-lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
|.+++..+|.+..+|...+..... .|++++|+..|+++++++|++..+
T Consensus 157 ~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 205 (308)
T 2ond_A 157 FKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEY 205 (308)
T ss_dssp HHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 555555555444444433333222 355555555555555555544433
No 106
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.42 E-value=3.8e-13 Score=109.75 Aligned_cols=116 Identities=17% Similarity=0.123 Sum_probs=106.3
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..++..+ ..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++..+|+ ..+++++|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVY--FCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLAL 90 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHH--HHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHH
Confidence 3444455555 7899999999999999999987666 789999999999999999999999999998 89999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKL 157 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~ 157 (428)
..+|++++|+..+.+++.++|.+..++..+|.++..+|++
T Consensus 91 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 91 SSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999875
No 107
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.42 E-value=2.6e-12 Score=123.12 Aligned_cols=161 Identities=12% Similarity=-0.051 Sum_probs=133.5
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCch-HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~-a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
+++..+...++..+ ..|++++|+..|++++..+|.+.. + |..+|..+...|++++|+..|.++++..|. ..+|..
T Consensus 96 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~--~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 173 (308)
T 2ond_A 96 KKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLV--YIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVT 173 (308)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHH--HHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHH--HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 34444455555556 789999999999999999998765 5 889999999999999999999999999988 777777
Q ss_pred HHHHHHH-hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CCC-cHHHH---------
Q 014256 113 RAMAYLK-LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL---EPQ-NQEIK--------- 178 (428)
Q Consensus 113 la~~~~~-~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l---~P~-~~~~~--------- 178 (428)
.|..... .|++++|...|++++.++|+++.+|..+|..+..+|++++|+..|++++.. .|+ ...++
T Consensus 174 ~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~ 253 (308)
T 2ond_A 174 AALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESN 253 (308)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 7666544 799999999999999999999999999999999999999999999999996 554 55663
Q ss_pred -HHHHHHHHHHHHHHHhchhh
Q 014256 179 -KQLAEVKSLYEKEVFQKASK 198 (428)
Q Consensus 179 -~~l~~a~~~~~~a~~~~~~~ 198 (428)
+++..|...+.+++...|..
T Consensus 254 ~g~~~~a~~~~~~a~~~~p~~ 274 (308)
T 2ond_A 254 IGDLASILKVEKRRFTAFREE 274 (308)
T ss_dssp HSCHHHHHHHHHHHHHHTTTT
T ss_pred cCCHHHHHHHHHHHHHHcccc
Confidence 33456666777777666643
No 108
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.42 E-value=8.6e-13 Score=122.29 Aligned_cols=147 Identities=22% Similarity=0.256 Sum_probs=124.4
Q ss_pred cCCCCcchHHHHHhhhhcC------CCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC--------Cc-HHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNE------ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT-AVAYANRA 114 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~------p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~--------p~-~~~~~nla 114 (428)
..|++++|+.+|++++... .....+..+..+|.+++..|+|++|+.+|.+++.+. |. ..++.++|
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 92 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLA 92 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 6789999999999999852 112245558899999999999999999999999873 44 77899999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCcHHH-
Q 014256 115 MAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRL--------EPQNQEI- 177 (428)
Q Consensus 115 ~~~~~~~~~~eA~~~~~~al~l--------~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l--------~P~~~~~- 177 (428)
.+|..+|++++|+..|.+++.+ +|....++.++|.++..+|++++|+..|++++.+ .|....+
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 172 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK 172 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999999999999999998 5777899999999999999999999999999998 5544433
Q ss_pred ---------HHHHHHHHHHHHHHHHhch
Q 014256 178 ---------KKQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 178 ---------~~~l~~a~~~~~~a~~~~~ 196 (428)
.+++++|...+.+++...+
T Consensus 173 ~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 173 NNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4567788888888877653
No 109
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.41 E-value=5.7e-13 Score=108.82 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=77.3
Q ss_pred HhcCHHHHHHHHHHHHcc---CCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH
Q 014256 86 KQKKFKEAIDCYSRSIAL---SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 161 (428)
Q Consensus 86 ~~g~~~~Ai~~y~~al~~---~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~ 161 (428)
..|++++|+.+|++++.+ +|+ ..+++++|.+|..+|+|++|+..|.+++.++|+++.+++++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 357888888899998888 466 7788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCcHHHH
Q 014256 162 EDSEFALRLEPQNQEIK 178 (428)
Q Consensus 162 ~~~~~al~l~P~~~~~~ 178 (428)
..|++++.+.|+++.+.
T Consensus 82 ~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHhCCCcHHHH
Confidence 99999999988887654
No 110
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.41 E-value=1.9e-12 Score=124.53 Aligned_cols=165 Identities=7% Similarity=-0.120 Sum_probs=144.0
Q ss_pred hhhcCCCccccCCCC-cchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhc--CHHHHHHHHHHHHccCCc-HHHHHHHHH
Q 014256 40 SAKKPSPSGNSYSRN-YDPVSHISSSLMNEESTPDATSEKELGNECFKQK--KFKEAIDCYSRSIALSPT-AVAYANRAM 115 (428)
Q Consensus 40 ~a~~~~~~~y~~g~~-~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g--~~~~Ai~~y~~al~~~p~-~~~~~nla~ 115 (428)
.+...+...+..|.+ ++|+..+.++|.++|.+..+ |+.+|.++...| ++++++.++..++..+|. ..+|+.|+.
T Consensus 34 ~~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~ta--Wn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~ 111 (306)
T 3dra_A 34 QIMGLLLALMKAEEYSERALHITELGINELASHYTI--WIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQL 111 (306)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHH--HHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHH
Confidence 333333333445555 58999999999999999888 889999999999 999999999999999999 999999999
Q ss_pred HH----HHh---cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCcHHHHH-------
Q 014256 116 AY----LKL---RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK--ESIEDSEFALRLEPQNQEIKK------- 179 (428)
Q Consensus 116 ~~----~~~---~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~--eA~~~~~~al~l~P~~~~~~~------- 179 (428)
++ ... +++++++..|++++..+|.+..+|+.++.+...+|.++ +++..+.+++.++|.|..++.
T Consensus 112 iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~ 191 (306)
T 3dra_A 112 IIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLF 191 (306)
T ss_dssp HHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99 777 78999999999999999999999999999999999999 999999999999999988842
Q ss_pred ---------HHHHHHHHHHHHHHhchhhhHhhhccc
Q 014256 180 ---------QLAEVKSLYEKEVFQKASKTLEKYGKS 206 (428)
Q Consensus 180 ---------~l~~a~~~~~~a~~~~~~~~~~~~~~~ 206 (428)
.+.++..++.+++..+|.+...+..+.
T Consensus 192 ~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~ 227 (306)
T 3dra_A 192 SKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLL 227 (306)
T ss_dssp SSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred hccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHH
Confidence 277788888999999999888665544
No 111
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.41 E-value=1.2e-12 Score=119.69 Aligned_cols=136 Identities=8% Similarity=-0.032 Sum_probs=119.2
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchH-HHHHHHHHHHHH------------------hcCHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDA-TSEKELGNECFK------------------QKKFKEAIDCYSR 99 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a-~~~~~lg~~~~~------------------~g~~~~Ai~~y~~ 99 (428)
.++..+|.+| ..|++++|+..|++++..+|++..+ .+++.+|.+++. .|++++|+..|++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 4566677777 8999999999999999999987653 347889999886 5799999999999
Q ss_pred HHccCCc-HHHH-----------------HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHcCCHH
Q 014256 100 SIALSPT-AVAY-----------------ANRAMAYLKLRRFQEAEDDCTEALNLDDRYI---KAYSRRATARKELGKLK 158 (428)
Q Consensus 100 al~~~p~-~~~~-----------------~nla~~~~~~~~~~eA~~~~~~al~l~p~~~---~a~~~lg~~~~~lg~~~ 158 (428)
++..+|+ ..++ ..+|.+|+..|+|++|+..|++++...|+++ .+++++|.++..+|+++
T Consensus 122 ~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 122 LVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp HHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcH
Confidence 9999998 3222 5789999999999999999999999999986 78999999999999999
Q ss_pred HHHHHHHHHHhhCCCcH
Q 014256 159 ESIEDSEFALRLEPQNQ 175 (428)
Q Consensus 159 eA~~~~~~al~l~P~~~ 175 (428)
+|+..++.+....|++.
T Consensus 202 ~A~~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 202 QAEKVAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHhhCCCch
Confidence 99999999999888754
No 112
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.41 E-value=1.8e-13 Score=115.82 Aligned_cols=114 Identities=15% Similarity=0.003 Sum_probs=99.1
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..+|..+ ..|++++|+..|.+++..+|.+..+ |..+|.++...|+|++|+.+|.+++.++|+ +.+++++|.+|
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 96 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARY--FLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 3444455555 8899999999999999999998777 789999999999999999999999999999 89999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 155 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg 155 (428)
..+|++++|+..|++++.++|+++.....+..+...++
T Consensus 97 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 97 LQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 99999999999999999999988766555555544443
No 113
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.40 E-value=4.1e-13 Score=111.81 Aligned_cols=102 Identities=15% Similarity=0.094 Sum_probs=90.1
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc--------HHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAY 110 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~--------~~~~ 110 (428)
.+...+|..+ ..|+|++|+.+|.+++.++|.+..+ +.++|.+|+..|+|++|+.+|.++++++|+ +.+|
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~--~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITF--YNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 4456677776 8999999999999999999998776 889999999999999999999999998764 3579
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH
Q 014256 111 ANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAY 144 (428)
Q Consensus 111 ~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~ 144 (428)
.++|.++..+|+|++|+..|.+++..+|+ +...
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~ 119 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELV 119 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHH
Confidence 99999999999999999999999999885 4433
No 114
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.40 E-value=2.2e-13 Score=117.67 Aligned_cols=114 Identities=12% Similarity=0.057 Sum_probs=97.7
Q ss_pred hcCCCccc-cCCCCcchHHHHHhhhhc------------------CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 42 KKPSPSGN-SYSRNYDPVSHISSSLMN------------------EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 42 ~~~~~~~y-~~g~~~~Ai~~~~~al~~------------------~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
+...|..+ ..|+|++|+..|.+++.. +|.... .+.++|.+|++.|+|++|+.+|.+++.
T Consensus 14 ~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~nla~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 14 LRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIP--LYANMSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHH--HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHH--HHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 34444555 788899999999999998 444333 488999999999999999999999999
Q ss_pred cCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHcCCH
Q 014256 103 LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYI-KAYSRRATARKELGKL 157 (428)
Q Consensus 103 ~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~-~a~~~lg~~~~~lg~~ 157 (428)
++|+ +.+|+++|.+|..+|+|++|+.+|.+++.++|++. .+...++.+...++.+
T Consensus 92 ~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 92 REETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred cCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999999999999998 6677777777665544
No 115
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.40 E-value=5.9e-13 Score=113.98 Aligned_cols=108 Identities=12% Similarity=0.055 Sum_probs=98.5
Q ss_pred HHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 014256 93 AIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 171 (428)
Q Consensus 93 Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~ 171 (428)
+-..|.+++.++|+ ...++++|.+++..|+|++|+..|.+++.++|.++.+|+.+|.++..+|++++|+..|++++.++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 34568899999998 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHH----------HHHHHHHHHHHHHHHHhchhhhH
Q 014256 172 PQNQEI----------KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 172 P~~~~~----------~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
|+++.+ .+++.+|...|++++...|.++.
T Consensus 86 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 124 (148)
T 2vgx_A 86 IXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPE 124 (148)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGG
T ss_pred CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCc
Confidence 999876 35678899999999998876543
No 116
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.40 E-value=6.3e-13 Score=118.74 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=106.1
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCch--------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPD--------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT- 106 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~--------------a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~- 106 (428)
...|..+ ..|++++|+..|.+++...|.... ...+.++|.+++..|+|++|+.+|.+++.++|.
T Consensus 42 ~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 121 (198)
T 2fbn_A 42 KEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN 121 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc
Confidence 3344455 788999999999999999887651 245889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHh
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI-EDSEFALR 169 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~-~~~~~al~ 169 (428)
..+++++|.+|..+|+|++|+..|.+++.++|++..++..++.++..+|++.++. ..|...+.
T Consensus 122 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 122 VKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999888776 44444443
No 117
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.2e-12 Score=132.75 Aligned_cols=163 Identities=14% Similarity=0.107 Sum_probs=136.6
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANR 113 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nl 113 (428)
++...++..++..| ..|++++|+..|.+++..+|.+..+ +..+|.++...|++++|+.+|.+++..+|. ..++.++
T Consensus 301 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 378 (514)
T 2gw1_A 301 SNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFP--YIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFF 378 (514)
T ss_dssp TTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHH--HHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHH
Confidence 44455666677777 8889999999999999988887666 778899999999999999999999988887 7888889
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHH---cCCHHHHHHHHHHHHhhCCCcHHH-------
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNLDDRYIK------AYSRRATARKE---LGKLKESIEDSEFALRLEPQNQEI------- 177 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l~p~~~~------a~~~lg~~~~~---lg~~~eA~~~~~~al~l~P~~~~~------- 177 (428)
|.++...|++++|+..+.+++.++|.+.. +++.+|.++.. .|++++|+..|++++.++|++..+
T Consensus 379 a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 458 (514)
T 2gw1_A 379 AEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQM 458 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 99999999999999999999988888754 88899999998 899999999999999999888765
Q ss_pred ---HHHHHHHHHHHHHHHHhchhhhH
Q 014256 178 ---KKQLAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 178 ---~~~l~~a~~~~~~a~~~~~~~~~ 200 (428)
.+++.+|...|++++..+|.+..
T Consensus 459 ~~~~g~~~~A~~~~~~a~~~~~~~~~ 484 (514)
T 2gw1_A 459 KLQQEDIDEAITLFEESADLARTMEE 484 (514)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhccccHH
Confidence 35677888888888888887655
No 118
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.39 E-value=4.2e-13 Score=136.51 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=108.5
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCch-------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHccC
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD-------------ATSEKELGNECFKQKKFKEAIDCYSRSIALS 104 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~-------------a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~ 104 (428)
..++...|..| ..|+|++|+..|.+++..+|.+.. +..+.++|.+|++.|+|++|+.+|++++.++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 347 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD 347 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 34455566666 899999999999999999988731 4458899999999999999999999999999
Q ss_pred Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 014256 105 PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 163 (428)
Q Consensus 105 p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~ 163 (428)
|+ ..+|+++|.+|+.+|+|++|+.+|.+++.++|++..++..++.++..+|++++|...
T Consensus 348 p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 348 SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 999999999999999999999999999999999999999999999999998877643
No 119
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.38 E-value=4.9e-13 Score=126.99 Aligned_cols=140 Identities=14% Similarity=0.063 Sum_probs=114.8
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYL 118 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~ 118 (428)
++...|..+ ..|++++|+..|.+++..+|.+..+ +.++|.+|...|+|++|+..|++++.++|+ ..+++++|.+|.
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVY--YTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 344455555 8899999999999999999987766 789999999999999999999999999998 999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCH-----HHHH--HHH----------------------HHHHHcCCHHHHHHHHHHHHh
Q 014256 119 KLRRFQEAEDDCTEALNLDDRYI-----KAYS--RRA----------------------TARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 119 ~~~~~~eA~~~~~~al~l~p~~~-----~a~~--~lg----------------------~~~~~lg~~~eA~~~~~~al~ 169 (428)
.+|++++|+..|.+++.++|++. .++. +++ ......|++++|+..++++++
T Consensus 84 ~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~ 163 (281)
T 2c2l_A 84 EMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHE 163 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGT
T ss_pred HcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999998652 1111 111 011135788999999999999
Q ss_pred hCCCcHHHHHHHH
Q 014256 170 LEPQNQEIKKQLA 182 (428)
Q Consensus 170 l~P~~~~~~~~l~ 182 (428)
++|++......+.
T Consensus 164 ~~p~~~~~~~~l~ 176 (281)
T 2c2l_A 164 GHEDDGHIRAQQA 176 (281)
T ss_dssp TTSCHHHHTHHHH
T ss_pred cccchhhhhhHHH
Confidence 9998876654443
No 120
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.38 E-value=4.6e-12 Score=132.26 Aligned_cols=153 Identities=10% Similarity=0.078 Sum_probs=138.8
Q ss_pred cCCCC-cchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 50 SYSRN-YDPVSHISSSLMNEESTPDATSEKELGNECFKQKK----------FKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 50 ~~g~~-~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~----------~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
..|++ ++|+..+.+++..+|.+..+ |+.+|.++...|+ +++|+.+|.+++..+|. ..+|++|+.++
T Consensus 40 ~~~~~~eeal~~~~~~l~~nP~~~ta--W~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l 117 (567)
T 1dce_A 40 QAGELDESVLELTSQILGANPDFATL--WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 117 (567)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCchhHHH--HHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 33444 56799999999999999888 8899999999998 99999999999999999 99999999999
Q ss_pred HHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCcHHHH----------------
Q 014256 118 LKLR--RFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-KLKESIEDSEFALRLEPQNQEIK---------------- 178 (428)
Q Consensus 118 ~~~~--~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg-~~~eA~~~~~~al~l~P~~~~~~---------------- 178 (428)
.+++ +|++|+..|++++++||.+..||..++.+...+| .++++++++.++++++|.+..++
T Consensus 118 ~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~ 197 (567)
T 1dce_A 118 SRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDS 197 (567)
T ss_dssp HTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCS
T ss_pred HHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccccc
Confidence 9999 7799999999999999999999999999999999 99999999999999999998772
Q ss_pred --------HHHHHHHHHHHHHHHhchhhhHhhhc
Q 014256 179 --------KQLAEVKSLYEKEVFQKASKTLEKYG 204 (428)
Q Consensus 179 --------~~l~~a~~~~~~a~~~~~~~~~~~~~ 204 (428)
+.++++.+++.+++..+|.+...+..
T Consensus 198 ~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y 231 (567)
T 1dce_A 198 GPQGRLPENVLLKELELVQNAFFTDPNDQSAWFY 231 (567)
T ss_dssp SSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHhhCCCCccHHHH
Confidence 34677888889999999998775543
No 121
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.38 E-value=6.2e-13 Score=125.42 Aligned_cols=134 Identities=19% Similarity=0.162 Sum_probs=116.3
Q ss_pred hhhhhcCCCccc-cCCCCcchHHHHHhhhhcC------CCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC------
Q 014256 38 LKSAKKPSPSGN-SYSRNYDPVSHISSSLMNE------ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS------ 104 (428)
Q Consensus 38 ~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~------p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~------ 104 (428)
...++..++..| ..|++++|+.+|.+++... .....+..+..+|.++...|++++|+.+|.+++.+.
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 147 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK 147 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC
Confidence 334556677777 8999999999999999873 222345568899999999999999999999999873
Q ss_pred --Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 014256 105 --PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 171 (428)
Q Consensus 105 --p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l--------~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~ 171 (428)
|. ..++.++|.++...|++++|+..+.+++.+ +|....++..+|.++..+|++++|+..|++++.+.
T Consensus 148 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 148 DHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 33 778999999999999999999999999998 77788899999999999999999999999999863
No 122
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=129.42 Aligned_cols=148 Identities=11% Similarity=0.027 Sum_probs=96.0
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHh--------
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL-------- 120 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~-------- 120 (428)
..+++++|+.+|++++..+|....+ +..+|.+|...|++++|+.+|.++++.+|+ +.++.++|.+|...
T Consensus 225 ~~~~~~~a~~~~~~al~~~~~~~~~--~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~ 302 (472)
T 4g1t_A 225 EGEEEGEGEKLVEEALEKAPGVTDV--LRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLR 302 (472)
T ss_dssp -----CHHHHHHHHHHHHCSSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHHHHHHHhCccHHHH--HHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHH
Confidence 3455666666666666666665555 556777777777777777777777777776 66677777666543
Q ss_pred -----------cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH------------
Q 014256 121 -----------RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI------------ 177 (428)
Q Consensus 121 -----------~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~------------ 177 (428)
+.+++|+..+.+++.++|.+..+++.+|.++..+|++++|+..|++++.++|++...
T Consensus 303 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~ 382 (472)
T 4g1t_A 303 ENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQL 382 (472)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 235666777777777777777777777777777777777777777777777765432
Q ss_pred --HHHHHHHHHHHHHHHHhchhhh
Q 014256 178 --KKQLAEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 178 --~~~l~~a~~~~~~a~~~~~~~~ 199 (428)
.+.+++|+..|.+++.++|...
T Consensus 383 ~~~~~~~~Ai~~y~kal~i~~~~~ 406 (472)
T 4g1t_A 383 YQMKCEDKAIHHFIEGVKINQKSR 406 (472)
T ss_dssp HTSSCHHHHHHHHHHHHHSCCCCH
T ss_pred HHCCCHHHHHHHHHHHHhcCcccH
Confidence 1224567777777777665543
No 123
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.37 E-value=1.8e-13 Score=133.64 Aligned_cols=136 Identities=12% Similarity=0.048 Sum_probs=84.3
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCch---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHccC
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD---------------ATSEKELGNECFKQKKFKEAIDCYSRSIALS 104 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~---------------a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~ 104 (428)
++...|..+ ..|+|++|+..|.+++...|.+.. ..++.++|.+|++.|+|++|+.+|++++.++
T Consensus 181 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 260 (338)
T 2if4_A 181 RRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEE 260 (338)
T ss_dssp HHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 344455555 889999999999999999887541 0248899999999999999999999999999
Q ss_pred Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCCCcHH
Q 014256 105 PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR-KELGKLKESIEDSEFALRLEPQNQE 176 (428)
Q Consensus 105 p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~-~~lg~~~eA~~~~~~al~l~P~~~~ 176 (428)
|+ ..+|+++|.+|..+|+|++|+.+|.+++.++|++..++..++.+. ...+..+++...|.+++...|+++.
T Consensus 261 p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 261 EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 98 999999999999999999999999999999999999999999884 4566778899999999999998764
No 124
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.37 E-value=1.2e-12 Score=106.86 Aligned_cols=100 Identities=10% Similarity=0.081 Sum_probs=85.8
Q ss_pred CCCCcchHHHHHhhhhc---CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHH
Q 014256 51 YSRNYDPVSHISSSLMN---EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEA 126 (428)
Q Consensus 51 ~g~~~~Ai~~~~~al~~---~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA 126 (428)
.|++++|+.+|++++.. +|.+..+ +..+|.+|+..|+|++|+.+|+++++++|+ +.+++++|.++..+|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~--~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAEC--YLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 58999999999999999 4665555 889999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 127 EDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 127 ~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
+..|.+++..+|+++.+......+..
T Consensus 81 ~~~~~~al~~~p~~~~~~~~~~ai~~ 106 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQSYKQAILF 106 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 99999999999999876544443333
No 125
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.36 E-value=1.7e-11 Score=118.84 Aligned_cols=152 Identities=11% Similarity=0.085 Sum_probs=135.3
Q ss_pred cCCCCc-chHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 50 SYSRNY-DPVSHISSSLMNEESTPDATSEKELGNECFKQKK----------FKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 50 ~~g~~~-~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~----------~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
..|++. +|+..+..++..+|.+..+ |+.++.++...|. +.+++.++..++..+|. ..+|+.++.++
T Consensus 41 ~~~e~s~eaL~~t~~~L~~nP~~yta--Wn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL 118 (331)
T 3dss_A 41 QAGELDESVLELTSQILGANPDFATL--WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 118 (331)
T ss_dssp HTTCCSHHHHHHHHHHHTTCTTCHHH--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCchhHHH--HHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 446665 7999999999999999888 8889999888776 79999999999999998 99999999999
Q ss_pred HHhcC--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCcHHHH----------------
Q 014256 118 LKLRR--FQEAEDDCTEALNLDDRYIKAYSRRATARKELGK-LKESIEDSEFALRLEPQNQEIK---------------- 178 (428)
Q Consensus 118 ~~~~~--~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~-~~eA~~~~~~al~l~P~~~~~~---------------- 178 (428)
..+++ +++++..|.+++.+||.|..+|..++.+...+|. ++++++++.+++..+|.|..++
T Consensus 119 ~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~ 198 (331)
T 3dss_A 119 SRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDS 198 (331)
T ss_dssp HHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC--
T ss_pred hccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhcccc
Confidence 99994 9999999999999999999999999999999999 6999999999999999998873
Q ss_pred --------HHHHHHHHHHHHHHHhchhhhHhhh
Q 014256 179 --------KQLAEVKSLYEKEVFQKASKTLEKY 203 (428)
Q Consensus 179 --------~~l~~a~~~~~~a~~~~~~~~~~~~ 203 (428)
+.+.++..++.+++..+|.+...+.
T Consensus 199 ~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 199 GPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3456677777788888888777654
No 126
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.36 E-value=2.1e-13 Score=130.99 Aligned_cols=163 Identities=7% Similarity=-0.002 Sum_probs=128.0
Q ss_pred ccChhhhhcCC---Cccc-cCCCCcchHHHHHhhhhcCCCC----chHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC-
Q 014256 35 SSSLKSAKKPS---PSGN-SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNECFKQKKFKEAIDCYSRSIALSP- 105 (428)
Q Consensus 35 ~~~~~~a~~~~---~~~y-~~g~~~~Ai~~~~~al~~~p~~----~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p- 105 (428)
.+++..|...+ +..| ..|++++|+.+|.+++.+.+.. ..+..+.++|.+|...|+|++|+.+|++++.+.+
T Consensus 29 ~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~ 108 (307)
T 2ifu_A 29 KPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVE 108 (307)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 46777666433 4445 7899999999999998876432 2345688999999999999999999999998742
Q ss_pred ----c--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 014256 106 ----T--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQ 173 (428)
Q Consensus 106 ----~--~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~ 173 (428)
. ..++.++|.+|.. |++++|+..|.+++.+.+.. ..++.++|.++..+|+|++|+..|++++.+.|.
T Consensus 109 ~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 109 NGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 1 5678899999988 99999999999999887653 578899999999999999999999999988654
Q ss_pred cHH------H----------HHHHHHHHHHHHHHHHhchhhh
Q 014256 174 NQE------I----------KKQLAEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 174 ~~~------~----------~~~l~~a~~~~~~a~~~~~~~~ 199 (428)
+.. . .+++.+|...|++++ ..|...
T Consensus 188 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 188 MENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred cCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 321 1 256778888888888 777543
No 127
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.36 E-value=6e-13 Score=114.88 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=88.8
Q ss_pred CCccc-cCCCCcchHHHHHhhhhcCCCC-------ch---HHHHHHHHHHHHHhcCHHHHHHHHHHHHcc-------CCc
Q 014256 45 SPSGN-SYSRNYDPVSHISSSLMNEEST-------PD---ATSEKELGNECFKQKKFKEAIDCYSRSIAL-------SPT 106 (428)
Q Consensus 45 ~~~~y-~~g~~~~Ai~~~~~al~~~p~~-------~~---a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~-------~p~ 106 (428)
.|..+ ..|+|++|+..|++++.++|.+ .. +.+|.++|.++.+.|+|++|+.+|+++|++ +|+
T Consensus 17 ~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd 96 (159)
T 2hr2_A 17 DAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD 96 (159)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc
Confidence 34444 7799999999999999999983 22 336899999999999999999999999999 999
Q ss_pred -HHHH----HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Q 014256 107 -AVAY----ANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 145 (428)
Q Consensus 107 -~~~~----~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~ 145 (428)
..+| +++|.++..+|+|++|+.+|+++++++|.+..++-
T Consensus 97 ~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 97 EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 8889 99999999999999999999999999998754433
No 128
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.35 E-value=9.4e-13 Score=124.16 Aligned_cols=160 Identities=21% Similarity=0.226 Sum_probs=132.9
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhc--------CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC--
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMN--------EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS-- 104 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~--------~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~-- 104 (428)
+....++..++..| ..|++++|+.+|.+++.. .|. .+..+..+|.++...|++++|+.+|.+++.+.
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 101 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPD--VATMLNILALVYRDQNKYKDAANLLNDALAIREK 101 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHH--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 34445666777777 899999999999999985 333 34558899999999999999999999999872
Q ss_pred ------Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 014256 105 ------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD--------DRYIKAYSRRATARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 105 ------p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~--------p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~ 169 (428)
|. ..++.++|.+|..+|++++|+..+.+++.+. |....++.++|.++...|++++|+..|++++.
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33 7789999999999999999999999999884 66678899999999999999999999999999
Q ss_pred h--------CCCcHHH----------HHHHHHHHHHHHHHHHhchh
Q 014256 170 L--------EPQNQEI----------KKQLAEVKSLYEKEVFQKAS 197 (428)
Q Consensus 170 l--------~P~~~~~----------~~~l~~a~~~~~~a~~~~~~ 197 (428)
+ .|....+ .+++.+|...+++++...+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8 4444333 45677888888888776543
No 129
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.35 E-value=1.4e-12 Score=133.37 Aligned_cols=114 Identities=35% Similarity=0.647 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Q 014256 76 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL 154 (428)
Q Consensus 76 ~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~l 154 (428)
.++.+|..++..|+|++|+.+|+++++++|+ +.+|+++|.+|..+|+|++|+.+|+++++++|+++.+++++|.++..+
T Consensus 8 ~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 87 (477)
T 1wao_1 8 ELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 87 (477)
T ss_dssp TSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3668899999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 155 GKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 155 g~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
|++++|+..|+++++++|++..+...+..+..++.
T Consensus 88 g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 122 (477)
T 1wao_1 88 GKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK 122 (477)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999988877777655544
No 130
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.34 E-value=2.4e-12 Score=126.82 Aligned_cols=151 Identities=8% Similarity=0.070 Sum_probs=124.9
Q ss_pred CCccc-cCCCCcchHHHHHhhhhcC---CC-CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC-------c-HHHHH
Q 014256 45 SPSGN-SYSRNYDPVSHISSSLMNE---ES-TPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP-------T-AVAYA 111 (428)
Q Consensus 45 ~~~~y-~~g~~~~Ai~~~~~al~~~---p~-~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p-------~-~~~~~ 111 (428)
.|..+ ..|++++|+.+|.+++... ++ ...+..+..+|.+|+..|++++|+.+|.+++.+.+ . ..++.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 188 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHS 188 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 34444 8899999999999999872 22 22456689999999999999999999999999732 2 56899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----C-CCcHHH--
Q 014256 112 NRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRL-----E-PQNQEI-- 177 (428)
Q Consensus 112 nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~~~eA~~~~~~al~l-----~-P~~~~~-- 177 (428)
++|.+|..+|+|++|+..|.+++.+.+.. ..+++++|.++..+|++++|+..|++++.+ + |....+
T Consensus 189 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 268 (383)
T 3ulq_A 189 LFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYF 268 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHH
Confidence 99999999999999999999999886543 358999999999999999999999999994 4 554443
Q ss_pred --------HHHHHHHHHHHHHHHHhc
Q 014256 178 --------KKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 178 --------~~~l~~a~~~~~~a~~~~ 195 (428)
.+++.+|...+++++...
T Consensus 269 ~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 269 LITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 355778888888887765
No 131
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.33 E-value=2e-12 Score=106.68 Aligned_cols=91 Identities=15% Similarity=0.060 Sum_probs=81.5
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 128 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~ 128 (428)
..|++++|+..|++++..+|.+..+ |+.+|.++...|++++|+.+|+++++++|+ ..+++++|.+|..+|++++|+.
T Consensus 29 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~ 106 (121)
T 1hxi_A 29 KLANLAEAALAFEAVCQKEPEREEA--WRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALA 106 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 7899999999999999999998877 889999999999999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhcCCCCHH
Q 014256 129 DCTEALNLDDRYIK 142 (428)
Q Consensus 129 ~~~~al~l~p~~~~ 142 (428)
.|.+++.++|.+..
T Consensus 107 ~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 107 SLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHC-------
T ss_pred HHHHHHHhCcCCCC
Confidence 99999999998754
No 132
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.33 E-value=1.1e-11 Score=116.05 Aligned_cols=150 Identities=14% Similarity=0.097 Sum_probs=109.9
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hcCHHHHHHHHHHHHccCCcHHHHHHH
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANR 113 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~----~g~~~~Ai~~y~~al~~~p~~~~~~nl 113 (428)
..+...+|..| ..|++++|+.+|++++. +.+..+ +..+|.+|.. .|++++|+.+|.++++.+ ++.+++++
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~~a--~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~l 80 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKENSG--CFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLL 80 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCHHH--HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCHHH--HHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-CHHHHHHH
Confidence 34445555555 67788888888888887 444444 6788888888 888888888888888775 47778888
Q ss_pred HHHHHH----hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHH--------
Q 014256 114 AMAYLK----LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEI-------- 177 (428)
Q Consensus 114 a~~~~~----~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~----lg~~~eA~~~~~~al~l~P~~~~~-------- 177 (428)
|.+|.. .+++++|+..|++++..+ ++.+++++|.++.. .|++++|+..|++++.+.+.....
T Consensus 81 g~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 81 GNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 888888 888888888888888774 77888888888888 888888888888888876422111
Q ss_pred ----HHHHHHHHHHHHHHHHhc
Q 014256 178 ----KKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 178 ----~~~l~~a~~~~~~a~~~~ 195 (428)
.+++.+|...|++++...
T Consensus 159 ~~~~~~~~~~A~~~~~~a~~~~ 180 (273)
T 1ouv_A 159 GRGTPKDLKKALASYDKACDLK 180 (273)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHCC
Confidence 123556666666666543
No 133
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.33 E-value=6.1e-12 Score=100.64 Aligned_cols=107 Identities=16% Similarity=0.167 Sum_probs=98.1
Q ss_pred CCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhc
Q 014256 44 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 121 (428)
Q Consensus 44 ~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~ 121 (428)
.+|..+ ..|++++|+..|++++..+|.+..+ +..+|.++...|+|++|+.+|.+++..+|+ ..++.++|.++..+|
T Consensus 9 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 86 (118)
T 1elw_A 9 EKGNKALSVGNIDDALQCYSEAIKLDPHNHVL--YSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLN 86 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH--HHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHh
Confidence 344445 7899999999999999999987766 789999999999999999999999999998 899999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 122 RFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 122 ~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
++++|+..+.+++.++|+++.++..++.+..
T Consensus 87 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 87 RFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 9999999999999999999999999887753
No 134
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.33 E-value=6.7e-12 Score=101.34 Aligned_cols=114 Identities=25% Similarity=0.339 Sum_probs=103.4
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..++..+ ..|++++|+..|.+++...|....+ +..+|.++...|++++|+.+|.+++..+|. ..++.++|.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA--WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 3444555566 8899999999999999999887665 789999999999999999999999999998 88999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 014256 118 LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 155 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg 155 (428)
...|++++|+..+.+++.++|+++.++..+|.++...|
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999988765
No 135
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.6e-12 Score=103.77 Aligned_cols=93 Identities=30% Similarity=0.508 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSR 146 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~ 146 (428)
+..++.+|.+++..|+|++|+.+|++++.++|+ +.+|+++|.++..+|+|++|+..|.+++.++|++ ..++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 445889999999999999999999999999998 9999999999999999999999999999999999 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHH
Q 014256 147 RATARKELGKLKESIEDSEF 166 (428)
Q Consensus 147 lg~~~~~lg~~~eA~~~~~~ 166 (428)
+|.++..+|++++|+..+++
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 84 LELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHhHhhhHhHHHH
Confidence 99999999988887766543
No 136
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.31 E-value=1.9e-11 Score=119.15 Aligned_cols=166 Identities=7% Similarity=-0.059 Sum_probs=144.2
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhc-CHHHHHHHHHHHHccCCc-HHHHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK-KFKEAIDCYSRSIALSPT-AVAYANR 113 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g-~~~~Ai~~y~~al~~~p~-~~~~~nl 113 (428)
+|..+...+...+ ..+..++|+..+.++|..+|.+..+ |+.+|.++...| .+++++.++..++..+|. ..+|+.|
T Consensus 52 ~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~yta--Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR 129 (349)
T 3q7a_A 52 EYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTV--WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHR 129 (349)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHH--HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 3444444433334 3445568999999999999999888 889999999999 599999999999999999 9999999
Q ss_pred HHHHHHh-c-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCcHHHHH----
Q 014256 114 AMAYLKL-R-RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK--------ESIEDSEFALRLEPQNQEIKK---- 179 (428)
Q Consensus 114 a~~~~~~-~-~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~--------eA~~~~~~al~l~P~~~~~~~---- 179 (428)
+.++..+ + ++++++..|.+++.++|.|..+|+.++.+...+|.++ ++++.+.+++.++|.|..++.
T Consensus 130 ~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~ 209 (349)
T 3q7a_A 130 LLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWY 209 (349)
T ss_dssp HHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9999998 8 9999999999999999999999999999999999988 999999999999999988732
Q ss_pred -------------HHHHHHHHHHHHHHhchhhhHhhhc
Q 014256 180 -------------QLAEVKSLYEKEVFQKASKTLEKYG 204 (428)
Q Consensus 180 -------------~l~~a~~~~~~a~~~~~~~~~~~~~ 204 (428)
.+.++..++.+++..+|.+...+..
T Consensus 210 lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Y 247 (349)
T 3q7a_A 210 LRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNY 247 (349)
T ss_dssp HHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 2577888889999999998876654
No 137
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.31 E-value=2.6e-12 Score=106.78 Aligned_cols=114 Identities=12% Similarity=0.013 Sum_probs=99.7
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAY 117 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~ 117 (428)
.++..+|..+ ..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.+++.++|+ ..+|+++|.++
T Consensus 10 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 10 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVY--YTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHH--HHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 3445556666 8899999999999999999997766 889999999999999999999999999999 99999999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHcC
Q 014256 118 LKLRRFQEAEDDCTEALNLDDR-----YIKAYSRRATARKELG 155 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~-----~~~a~~~lg~~~~~lg 155 (428)
..+|++++|+..|.+++.++|+ +..+...+..+.....
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 6666666666555443
No 138
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.30 E-value=7.7e-12 Score=118.88 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=109.3
Q ss_pred CCccccCCCCcchHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HHHHHHH
Q 014256 45 SPSGNSYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANR 113 (428)
Q Consensus 45 ~~~~y~~g~~~~Ai~~~~~al~~~p~~~~----a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~nl 113 (428)
+...+..|++++|+..|.+++...+.... ...+..+|..+...|+|++|+.+|.+++.+.+. ..++.++
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 161 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAI 161 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 44445778888888888888887766544 666778888888888888888888888875432 3467888
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHH---
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNL-------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN------QEI--- 177 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l-------~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~------~~~--- 177 (428)
|.+|..+|+|++|+..|.+++.. .+....+++++|.+|..+|+|++|+..+++++.+.+.. ..+
T Consensus 162 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 88888888888888888888842 22335678888888888888888888888888776432 222
Q ss_pred -------HH-HHHHHHHHHHHHHHhc
Q 014256 178 -------KK-QLAEVKSLYEKEVFQK 195 (428)
Q Consensus 178 -------~~-~l~~a~~~~~~a~~~~ 195 (428)
.+ .+++|...|++++.+.
T Consensus 242 lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 242 RGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 23 2467777777777654
No 139
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.30 E-value=4e-12 Score=111.48 Aligned_cols=132 Identities=11% Similarity=-0.024 Sum_probs=112.7
Q ss_pred ccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHH-HHhcCHHHHHHHHHHHHccCCc-HHHHH
Q 014256 35 SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNEC-FKQKKFKEAIDCYSRSIALSPT-AVAYA 111 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~-~~~g~~~~Ai~~y~~al~~~p~-~~~~~ 111 (428)
.++...++..++.+| ..|++++|+..|++++..+| +... +...|.+. ...++..+|+.+|++++..+|+ +.+++
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~--~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~ 112 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSY--KSLIAKLELHQQAAESPELKRLEQELAANPDNFELAC 112 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHH--HHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHH--HHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHH
Confidence 355666777777777 89999999999999999998 6544 33445443 3334555689999999999998 99999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 014256 112 NRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 112 nla~~~~~~~~~~eA~~~~~~al~l~p~~--~~a~~~lg~~~~~lg~~~eA~~~~~~al~ 169 (428)
++|.++...|++++|+..|.+++.++|++ ..++.++|.++..+|++++|+..|++++.
T Consensus 113 ~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 113 ELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999976 66999999999999999999999999874
No 140
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.30 E-value=4.1e-12 Score=110.96 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=102.7
Q ss_pred HHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHcCCH--
Q 014256 82 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKL-- 157 (428)
Q Consensus 82 ~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~-~~~lg~~-- 157 (428)
..+...|+|++|+..|.+++..+|. +.+|+.+|.+|...|++++|+..|.+++.++|.++.+++.+|.+ +...|++
T Consensus 18 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 18 HQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp CCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCC
T ss_pred hhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcch
Confidence 3456789999999999999999998 99999999999999999999999999999999999999999999 8899999
Q ss_pred HHHHHHHHHHHhhCCCcHHH----------HHHHHHHHHHHHHHHHhchhhh
Q 014256 158 KESIEDSEFALRLEPQNQEI----------KKQLAEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 158 ~eA~~~~~~al~l~P~~~~~----------~~~l~~a~~~~~~a~~~~~~~~ 199 (428)
++|+..|++++.++|++..+ .+++.+|...|.+++..+|...
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 99999999999999999876 3456778888888888887653
No 141
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.29 E-value=4e-12 Score=109.52 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=83.5
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCH----------HHHHHHHHHHHccCCc-HHHHHHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKF----------KEAIDCYSRSIALSPT-AVAYANRAMAYL 118 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~----------~~Ai~~y~~al~~~p~-~~~~~nla~~~~ 118 (428)
+.+.+++|+..|++++..+|.+..+ |.++|.++...+++ ++|+.+|+++|+++|+ ..+|+++|.+|.
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea--~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADN--LTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 5577899999999999999998877 88999999999875 5999999999999999 999999999999
Q ss_pred Hhc-----------CHHHHHHHHHHHHhcCCCCH
Q 014256 119 KLR-----------RFQEAEDDCTEALNLDDRYI 141 (428)
Q Consensus 119 ~~~-----------~~~eA~~~~~~al~l~p~~~ 141 (428)
.+| +|++|+.+|++|+.++|++.
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 985 89999999999999999985
No 142
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=1.1e-11 Score=103.84 Aligned_cols=115 Identities=13% Similarity=0.066 Sum_probs=100.7
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCc-hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHH
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAM 115 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~-~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~ 115 (428)
...+...+..+ ..|++++|+..|++++..+|... ....+..+|.+++..|+|++|+.+|.+++.++|+ ..+++++|.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 107 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQ 107 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHH
Confidence 34445556666 89999999999999999998751 1344889999999999999999999999999998 899999999
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 014256 116 AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 153 (428)
Q Consensus 116 ~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~ 153 (428)
++..+|++++|+..|.+++.++|++..++..++.+...
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 108 ALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999888876543
No 143
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.28 E-value=8.9e-12 Score=122.68 Aligned_cols=131 Identities=10% Similarity=0.092 Sum_probs=114.5
Q ss_pred hcCCCccc-cCCCCcchHHHHHhhhhcCCCCc-----hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HH
Q 014256 42 KKPSPSGN-SYSRNYDPVSHISSSLMNEESTP-----DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AV 108 (428)
Q Consensus 42 ~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~-----~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~ 108 (428)
+..+|.+| ..|++++|+.+|.+++.+.+... .+.++..+|.+|...|+|++|+.+|.+++.+.+. ..
T Consensus 146 ~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 225 (383)
T 3ulq_A 146 FFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGR 225 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 34445556 88999999999999999855432 3456889999999999999999999999987532 46
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh-----cC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 014256 109 AYANRAMAYLKLRRFQEAEDDCTEALN-----LD-DRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 172 (428)
Q Consensus 109 ~~~nla~~~~~~~~~~eA~~~~~~al~-----l~-p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P 172 (428)
++.++|.+|..+|++++|+..+.+++. .+ |..+.+++++|.++..+|++++|...+++++.+.+
T Consensus 226 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 226 TLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999 56 88899999999999999999999999999999854
No 144
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.28 E-value=4.6e-12 Score=125.29 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=107.5
Q ss_pred hcCCCccc-cCCCCcchHHHHHhhhh----------------cCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC
Q 014256 42 KKPSPSGN-SYSRNYDPVSHISSSLM----------------NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS 104 (428)
Q Consensus 42 ~~~~~~~y-~~g~~~~Ai~~~~~al~----------------~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~ 104 (428)
+..+|..+ ..|++++|+..|++++. .+|... ..+.++|.+|++.|+|++|+.+|+++++++
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~--~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVAL--SCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHH--HHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 44455556 88999999999999998 444433 448899999999999999999999999999
Q ss_pred Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 014256 105 PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 163 (428)
Q Consensus 105 p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~ 163 (428)
|+ +.+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.++..+++++++...
T Consensus 304 p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 304 PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 999999999999999999999999999999999999999999999999998887653
No 145
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.28 E-value=2.6e-11 Score=113.39 Aligned_cols=115 Identities=14% Similarity=0.153 Sum_probs=55.2
Q ss_pred CCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHH----hcC
Q 014256 51 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LRR 122 (428)
Q Consensus 51 ~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~----~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~----~~~ 122 (428)
.+++++|+.+|++++..+ +..+ +..+|.+|.. .+++++|+.+|+++++.+ ...+++++|.+|.. .++
T Consensus 91 ~~~~~~A~~~~~~a~~~~--~~~a--~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~ 165 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDLK--YAEG--CASLGGIYHDGKVVTRDFKKAVEYFTKACDLN-DGDGCTILGSLYDAGRGTPKD 165 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHH--HHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCC
T ss_pred ccCHHHHHHHHHHHHHcC--CccH--HHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC-cHHHHHHHHHHHHcCCCCCCC
Confidence 444555555555554442 2222 4445555554 455555555555555443 23444445555554 455
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCC
Q 014256 123 FQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEP 172 (428)
Q Consensus 123 ~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~----lg~~~eA~~~~~~al~l~P 172 (428)
+++|+..|++++.. .++.+++++|.++.. .+++++|+..|++++.+.|
T Consensus 166 ~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~ 217 (273)
T 1ouv_A 166 LKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 217 (273)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC
Confidence 55555555555444 234445555555555 5555555555555555443
No 146
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.27 E-value=8.9e-11 Score=113.78 Aligned_cols=143 Identities=9% Similarity=-0.002 Sum_probs=131.2
Q ss_pred CcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcC--HHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcC-HHHHHHH
Q 014256 54 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK--FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRR-FQEAEDD 129 (428)
Q Consensus 54 ~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~--~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~-~~eA~~~ 129 (428)
+.+++.++..++..+|.+..+ |..++.++...|+ +++++.++.++++.+|. ..+|.+++.+....|. ++++++.
T Consensus 90 l~~EL~~~~~~L~~~PKny~a--W~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGT--WHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHH--HHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 678999999999999999888 8899999999984 99999999999999998 9999999999999998 6999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhhCCCcHHHH-----------------
Q 014256 130 CTEALNLDDRYIKAYSRRATARKEL--------------GKLKESIEDSEFALRLEPQNQEIK----------------- 178 (428)
Q Consensus 130 ~~~al~l~p~~~~a~~~lg~~~~~l--------------g~~~eA~~~~~~al~l~P~~~~~~----------------- 178 (428)
+++++..+|.|..+|+.++.++..+ +.++++++.+.+++.++|+|..++
T Consensus 168 ~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~ 247 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELS 247 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccc
Confidence 9999999999999999999999988 568999999999999999999885
Q ss_pred ----HHHHHHHHHHHHHHHhchhh
Q 014256 179 ----KQLAEVKSLYEKEVFQKASK 198 (428)
Q Consensus 179 ----~~l~~a~~~~~~a~~~~~~~ 198 (428)
+.++++++.+.+.++..|.+
T Consensus 248 ~~~~~~l~~el~~~~elle~~pd~ 271 (331)
T 3dss_A 248 VEKSTVLQSELESCKELQELEPEN 271 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHHHHHhhCccc
Confidence 35677788888888888765
No 147
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.27 E-value=2.5e-11 Score=115.32 Aligned_cols=126 Identities=14% Similarity=0.073 Sum_probs=106.4
Q ss_pred CCccc-cCCCCcchHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc------C-Cc-HHHHH
Q 014256 45 SPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIAL------S-PT-AVAYA 111 (428)
Q Consensus 45 ~~~~y-~~g~~~~Ai~~~~~al~~~p~~~----~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~------~-p~-~~~~~ 111 (428)
++..+ ..+++++|+.+|.+++...+... .+..+..+|.+|...|+|++|+.+|.+++.. + +. ..+++
T Consensus 121 l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 200 (293)
T 3u3w_A 121 VAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRY 200 (293)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Confidence 44444 67899999999999999654332 2445889999999999999999999999952 2 12 66899
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCC-HHHHHHHHHHHHhh
Q 014256 112 NRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGK-LKESIEDSEFALRL 170 (428)
Q Consensus 112 nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~-~~eA~~~~~~al~l 170 (428)
|+|.+|..+|+|++|+..+.+++.+.+.. +.+++++|.++..+|+ +++|+..|++++.+
T Consensus 201 nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 201 NHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999887544 7899999999999995 79999999998864
No 148
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.27 E-value=5.7e-12 Score=120.90 Aligned_cols=134 Identities=11% Similarity=0.046 Sum_probs=114.8
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCC----chHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AV 108 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~----~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~ 108 (428)
++..+|..| ..|++++|+.+|++++.+.+.. ..+..+.++|.+|.. |+|++|+.+|++++.+.+. ..
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~ 156 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAE 156 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHH
Confidence 445566667 7899999999999999885432 235568899999999 9999999999999998652 56
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH
Q 014256 109 AYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 176 (428)
Q Consensus 109 ~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~ 176 (428)
++.++|.+|..+|+|++|+..|++++.+.|.+ ..+++.+|.++..+|++++|+..|++++ ++|....
T Consensus 157 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 157 LIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 79999999999999999999999999987644 3578899999999999999999999999 9997654
No 149
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.27 E-value=6.9e-12 Score=119.30 Aligned_cols=133 Identities=14% Similarity=0.016 Sum_probs=120.1
Q ss_pred ccChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHH
Q 014256 35 SSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 112 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~n 112 (428)
.++...++..++..| ..|++++|+..|++++..+|+.... ....+..+...+++.+|+..|++++..+|+ ..++++
T Consensus 147 ~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~--~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~ 224 (287)
T 3qou_A 147 SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQ--GLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQ 224 (287)
T ss_dssp TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHH--HHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHH--HHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHH
Confidence 455556666677777 8999999999999999999965433 667888899999999999999999999999 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~--~~a~~~lg~~~~~lg~~~eA~~~~~~al~ 169 (428)
+|.++...|++++|+..|.+++..+|++ ..++.++|.++..+|+.++|...|++++.
T Consensus 225 la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 225 LALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999998 89999999999999999999999999875
No 150
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.26 E-value=8e-11 Score=95.26 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=82.2
Q ss_pred HHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 92 EAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 92 ~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
.|+.+|.+++..+|+ +.+++++|.+|...|++++|+..|.+++.++|.++.+++.+|.++..+|++++|+..|++++.+
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 578889999999998 8889999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCc--HHHHHHHHHHHHHHH
Q 014256 171 EPQN--QEIKKQLAEVKSLYE 189 (428)
Q Consensus 171 ~P~~--~~~~~~l~~a~~~~~ 189 (428)
.|.+ ......+..+...+.
T Consensus 83 ~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 83 AQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhc
Confidence 8743 344444444444333
No 151
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.25 E-value=2.3e-11 Score=119.69 Aligned_cols=120 Identities=10% Similarity=0.043 Sum_probs=65.3
Q ss_pred cCCCCcchHHHHHhhhhcCCC----CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC-------c-HHHHHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP-------T-AVAYANRAMAY 117 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~----~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p-------~-~~~~~nla~~~ 117 (428)
..|++++|+.+|.+++...+. ...+..+..+|.+|+..|+++.|+.+|.+++.+.+ . +.++.++|.+|
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y 192 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNY 192 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 455556666666665554221 12344455666666666666666666666655421 1 33455566666
Q ss_pred HHhcCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 014256 118 LKLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p------~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~ 169 (428)
..+|+|++|+..|.+++.+.+ ....+++++|.++..+|++++|+..|++++.
T Consensus 193 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 193 DDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 666666666666666655422 1134555566666666666666666666665
No 152
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.25 E-value=2.9e-11 Score=99.23 Aligned_cols=107 Identities=12% Similarity=-0.005 Sum_probs=92.9
Q ss_pred cCCCCcchHHHHHhhhhcCCCCch-HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc----HHHHHHHHHHHHHhcCHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQ 124 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~-a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~nla~~~~~~~~~~ 124 (428)
..|++++|+..|.+++..+|.+.. ...++.+|.+++..|+|++|+.+|.+++..+|+ +.+++++|.+|..+|+++
T Consensus 14 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~ 93 (129)
T 2xev_A 14 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNT 93 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHH
T ss_pred HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHH
Confidence 789999999999999999998762 133789999999999999999999999999987 677999999999999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 014256 125 EAEDDCTEALNLDDRYIKAYSRRATARKELGK 156 (428)
Q Consensus 125 eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~ 156 (428)
+|+..|++++..+|++..+...+..+....++
T Consensus 94 ~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 94 EAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 99999999999999998877666655544443
No 153
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.24 E-value=4.8e-11 Score=114.71 Aligned_cols=152 Identities=11% Similarity=-0.032 Sum_probs=134.5
Q ss_pred hccChhhhhcCCCccc-cCC--CCcchHHHHHhhhhcCCCCchHHHHHHHHHHH----HHh---cCHHHHHHHHHHHHcc
Q 014256 34 VSSSLKSAKKPSPSGN-SYS--RNYDPVSHISSSLMNEESTPDATSEKELGNEC----FKQ---KKFKEAIDCYSRSIAL 103 (428)
Q Consensus 34 ~~~~~~~a~~~~~~~y-~~g--~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~----~~~---g~~~~Ai~~y~~al~~ 103 (428)
..+++..+...-+.++ ..+ ++++++..+..++..+|.+..+ |..++.++ ... +++++++.++.++++.
T Consensus 62 ~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~a--W~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~ 139 (306)
T 3dra_A 62 ELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQI--WNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS 139 (306)
T ss_dssp HCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHH--HHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH
T ss_pred HCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHH--HHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 4455555554444444 566 9999999999999999999988 88999998 666 7999999999999999
Q ss_pred CCc-HHHHHHHHHHHHHhcCHH--HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHhhCCCc
Q 014256 104 SPT-AVAYANRAMAYLKLRRFQ--EAEDDCTEALNLDDRYIKAYSRRATARKELGK------LKESIEDSEFALRLEPQN 174 (428)
Q Consensus 104 ~p~-~~~~~nla~~~~~~~~~~--eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~------~~eA~~~~~~al~l~P~~ 174 (428)
+|. ..+|++++.+...+|.++ +++..+++++..||.|..+|+.++.+...+|. ++++++.+.+++.++|+|
T Consensus 140 ~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n 219 (306)
T 3dra_A 140 DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQN 219 (306)
T ss_dssp CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSC
T ss_pred CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCC
Confidence 998 999999999999999999 99999999999999999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 014256 175 QEIKKQLAEVKSL 187 (428)
Q Consensus 175 ~~~~~~l~~a~~~ 187 (428)
..++..+.-+...
T Consensus 220 ~SaW~y~~~ll~~ 232 (306)
T 3dra_A 220 PSTWNYLLGIHER 232 (306)
T ss_dssp HHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHh
Confidence 9998777766543
No 154
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.24 E-value=1.8e-11 Score=120.40 Aligned_cols=128 Identities=15% Similarity=0.065 Sum_probs=98.5
Q ss_pred Cccc-cCCCCcchHHHHHhhhhcCCCC-----chHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC-----c--HHHHHH
Q 014256 46 PSGN-SYSRNYDPVSHISSSLMNEEST-----PDATSEKELGNECFKQKKFKEAIDCYSRSIALSP-----T--AVAYAN 112 (428)
Q Consensus 46 ~~~y-~~g~~~~Ai~~~~~al~~~p~~-----~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p-----~--~~~~~n 112 (428)
|..| ..|+++.|+.+|.+++...+.. ..+.++..+|.+|...|+|++|+.+|.+++.+.+ . ..++.+
T Consensus 148 g~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 227 (378)
T 3q15_A 148 AEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLN 227 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3344 6788888888888888765432 2345577888888888888888888888887632 1 557888
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALN-----LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 173 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~-----l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~ 173 (428)
+|.+|..+|++++|+..+.+++. .+|..+.+++++|.++..+|++++|+..+++++.+.+.
T Consensus 228 lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 228 IANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888888 67777888888888888888888888888888887654
No 155
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.24 E-value=4.4e-12 Score=125.20 Aligned_cols=155 Identities=15% Similarity=0.109 Sum_probs=129.8
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCch--HHHHHHHHHHHHHhcCHHHHHHHHHHHHcc------CCc-HHHHHH
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIAL------SPT-AVAYAN 112 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~--a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~------~p~-~~~~~n 112 (428)
...|..+ ..|++++|+..|++++...|.+.. +..+..+|.+|+..|+|++|+.+|.+++.+ .|. ..++.+
T Consensus 52 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 131 (411)
T 4a1s_A 52 ALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGN 131 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 3455555 889999999999999999988763 345889999999999999999999999987 344 788999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHh
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNL------DDRYIKAYSRRATARKELGK-----------------LKESIEDSEFALR 169 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l------~p~~~~a~~~lg~~~~~lg~-----------------~~eA~~~~~~al~ 169 (428)
+|.+|..+|++++|+..|.+++.+ .+....++.++|.++..+|+ +++|+..+.+++.
T Consensus 132 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~ 211 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLK 211 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 56778899999999999999 9999999999988
Q ss_pred hCCCc---H---HH----------HHHHHHHHHHHHHHHHhchh
Q 014256 170 LEPQN---Q---EI----------KKQLAEVKSLYEKEVFQKAS 197 (428)
Q Consensus 170 l~P~~---~---~~----------~~~l~~a~~~~~~a~~~~~~ 197 (428)
+.+.. . .+ .+++.+|...+.+++...+.
T Consensus 212 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 212 LMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 75311 1 11 35577788888888776643
No 156
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.23 E-value=3.7e-11 Score=114.09 Aligned_cols=122 Identities=14% Similarity=0.085 Sum_probs=94.9
Q ss_pred cCCCCcchHHHHHhhhhcCCCC----chHHHHHHHHHHHHHhcCHHHHHHHHHHHHc---cCCc-----HHHHHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNECFKQKKFKEAIDCYSRSIA---LSPT-----AVAYANRAMAY 117 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~----~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~---~~p~-----~~~~~nla~~~ 117 (428)
..|++++|+.+|.+++...+.. ..+..+..+|.+|...|+|++|+.+|.+++. ..|+ ..+++|+|.+|
T Consensus 127 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y 206 (293)
T 2qfc_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKAL 206 (293)
T ss_dssp TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHH
Confidence 6678888888888888764332 2244578888888888999999999888884 3343 25788888889
Q ss_pred HHhcCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhhC
Q 014256 118 LKLRRFQEAEDDCTEALNLDDR------YIKAYSRRATARKELGKLKES-IEDSEFALRLE 171 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al~l~p~------~~~a~~~lg~~~~~lg~~~eA-~~~~~~al~l~ 171 (428)
..+|+|++|+..+.+++.+.+. ...+++++|.++..+|++++| ..+|++++.+.
T Consensus 207 ~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 207 YLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 8899999999888888877543 267888888888889988888 77788888664
No 157
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.21 E-value=1.2e-11 Score=121.09 Aligned_cols=155 Identities=16% Similarity=0.157 Sum_probs=125.5
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCch--HHHHHHHHHHHHHhcCHHHHHHHHHHHHccC------Cc-HHHHHH
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYAN 112 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~--a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~------p~-~~~~~n 112 (428)
...|..+ ..|++++|+.+|++++...|.+.. +..+..+|.+++..|+|++|+.+|.+++.+. |. ..++.+
T Consensus 13 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 92 (406)
T 3sf4_A 13 ALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGN 92 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 3445555 889999999999999999887753 4558899999999999999999999998873 23 678999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCC--------------------HHHHHHHHHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGK--------------------LKESIEDSEF 166 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~--------------------~~eA~~~~~~ 166 (428)
+|.+|..+|++++|+..+.+++.+.+.. ..++..+|.++...|+ +++|+..+.+
T Consensus 93 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~ 172 (406)
T 3sf4_A 93 LGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEE 172 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999887643 5589999999999999 9999999999
Q ss_pred HHhhCC------CcHHH----------HHHHHHHHHHHHHHHHhchh
Q 014256 167 ALRLEP------QNQEI----------KKQLAEVKSLYEKEVFQKAS 197 (428)
Q Consensus 167 al~l~P------~~~~~----------~~~l~~a~~~~~~a~~~~~~ 197 (428)
++.+.+ ....+ .+++.+|...+.+++...+.
T Consensus 173 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 219 (406)
T 3sf4_A 173 NLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 219 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh
Confidence 988732 11111 45677788888887776543
No 158
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.21 E-value=3.5e-11 Score=106.45 Aligned_cols=144 Identities=15% Similarity=0.035 Sum_probs=103.4
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc------CCc-HHHHHHHHHHHHHhcC
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL------SPT-AVAYANRAMAYLKLRR 122 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~------~p~-~~~~~nla~~~~~~~~ 122 (428)
..|++++|...++.+.. +|. ..+..+..+|.++...|+|++|+.+|.+++.+ .+. ..++.++|.+|..+|+
T Consensus 4 ~~g~~~~A~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 4 EAHDYALAERQAQALLA-HPA-TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp ---CHHHHHHHHHHHHT-STT-THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccHHHHHHHHHHhcC-ChH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 56788888884444433 332 23555788999999999999999999998884 222 6678889999999999
Q ss_pred HHHHHHHHHHHHhc---CC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CcHHH--------------HH
Q 014256 123 FQEAEDDCTEALNL---DD----RYIKAYSRRATARKELGKLKESIEDSEFALRLEP--QNQEI--------------KK 179 (428)
Q Consensus 123 ~~eA~~~~~~al~l---~p----~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P--~~~~~--------------~~ 179 (428)
+++|+..+.+++.+ .+ ....+++++|.++..+|++++|+..+++++.+.+ .+... .+
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 161 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEK 161 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCc
Confidence 99999999998887 33 2356788899999999999999999999887642 22211 24
Q ss_pred HHHHHHHHHHHHHHhc
Q 014256 180 QLAEVKSLYEKEVFQK 195 (428)
Q Consensus 180 ~l~~a~~~~~~a~~~~ 195 (428)
++.+|...+.+++.+.
T Consensus 162 ~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 162 NLLEAQQHWLRARDIF 177 (203)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 5666777777666544
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.21 E-value=1.4e-10 Score=110.12 Aligned_cols=147 Identities=14% Similarity=0.059 Sum_probs=117.6
Q ss_pred ccCCCCcchHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HHHHHHHHHHH
Q 014256 49 NSYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAY 117 (428)
Q Consensus 49 y~~g~~~~Ai~~~~~al~~~p~~~~----a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~nla~~~ 117 (428)
+..|++++|+..|.+++...+.... ...++.+|..+...|+|++|+.+|.+++...+. ..+++++|.+|
T Consensus 86 ~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 165 (293)
T 2qfc_A 86 CKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIY 165 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 3889999999999999998776432 233567899999999999999999999976432 55899999999
Q ss_pred HHhcCHHHHHHHHHHHH---hcCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc------HHH-------
Q 014256 118 LKLRRFQEAEDDCTEAL---NLDDRYI----KAYSRRATARKELGKLKESIEDSEFALRLEPQN------QEI------- 177 (428)
Q Consensus 118 ~~~~~~~eA~~~~~~al---~l~p~~~----~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~------~~~------- 177 (428)
..+|+|++|+..|.+++ ...|++. .+++++|.+|..+|+|++|+..+++++.+.+.. ..+
T Consensus 166 ~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~ 245 (293)
T 2qfc_A 166 AENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGEC 245 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 99999999999999999 4455542 689999999999999999999999999886431 222
Q ss_pred ---HHHHHHH-HHHHHHHHHhc
Q 014256 178 ---KKQLAEV-KSLYEKEVFQK 195 (428)
Q Consensus 178 ---~~~l~~a-~~~~~~a~~~~ 195 (428)
.+++++| ..+|++++.+.
T Consensus 246 y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 246 LRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHcCCcHHHHHHHHHHHHHHH
Confidence 2335566 55677766544
No 160
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.21 E-value=3.1e-11 Score=126.00 Aligned_cols=129 Identities=9% Similarity=-0.003 Sum_probs=121.1
Q ss_pred CcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhc--CHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhc-CHHHHHHH
Q 014256 54 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQK--KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR-RFQEAEDD 129 (428)
Q Consensus 54 ~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g--~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~-~~~eA~~~ 129 (428)
+++++..+++++..+|++..+ |..+|.++.+.| +|++|++++.++++.+|. ..+|.+++.+...+| .+++++++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~a--W~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGT--WHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHH
Confidence 899999999999999999888 889999999999 779999999999999998 999999999999999 99999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 130 CTEALNLDDRYIKAYSRRATARKEL--------------GKLKESIEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 130 ~~~al~l~p~~~~a~~~lg~~~~~l--------------g~~~eA~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
++++++.+|.+..+|+.+|.++..+ +.+++|++++.+++.++|++..++..+.-+
T Consensus 167 ~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~l 235 (567)
T 1dce_A 167 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 235 (567)
T ss_dssp HHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHH
T ss_pred HHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 9999999999999999999999986 668999999999999999999888665544
No 161
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.21 E-value=4.1e-11 Score=113.25 Aligned_cols=128 Identities=15% Similarity=0.088 Sum_probs=112.9
Q ss_pred ccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC-Cc--HHHHHHHHHHHHHhcC
Q 014256 47 SGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS-PT--AVAYANRAMAYLKLRR 122 (428)
Q Consensus 47 ~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~-p~--~~~~~nla~~~~~~~~ 122 (428)
..+ ..|+|++|.+.|..++...|... + .+.+|.++++.|+|++|+.+|++++... |. ..+++++|.++..+|+
T Consensus 110 ~~L~~~g~y~eA~~~l~~~~~~~p~~~-~--~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~ 186 (282)
T 4f3v_A 110 ACEAAQGNYADAMEALEAAPVAGSEHL-V--AWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLAL 186 (282)
T ss_dssp HHHHHHTCHHHHHHHHTSSCCTTCHHH-H--HHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCHHHHHHHHHHHHhcCCchH-H--HHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCC
Confidence 335 78999999999999999888665 4 7899999999999999999999887764 32 4589999999999999
Q ss_pred HHHHHHHHHHHHhcC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH
Q 014256 123 FQEAEDDCTEALNLD--DR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 178 (428)
Q Consensus 123 ~~eA~~~~~~al~l~--p~-~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~ 178 (428)
+++|+..|.+++.-. |. .+.+++++|.++..+|+.++|...|++++..+|+ ..+.
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 999999999998654 65 6779999999999999999999999999999998 6543
No 162
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.20 E-value=2.9e-11 Score=101.93 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=106.1
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AV 108 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~----~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~ 108 (428)
++..+|..| ..|++++|+.+|.+++...+... .+..+..+|.++...|++++|+.+|.+++.+.+. ..
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 90 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQ 90 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 344555566 78899999999999988754321 2345788999999999999999999999886432 55
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 014256 109 AYANRAMAYLKLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 173 (428)
Q Consensus 109 ~~~nla~~~~~~~~~~eA~~~~~~al~l~p------~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~ 173 (428)
++.++|.++..+|++++|+..+.+++.+.+ ....++..+|.++..+|++++|+..+++++.+...
T Consensus 91 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 91 SCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999987743 22567888999999999999999999999887543
No 163
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.20 E-value=1.3e-10 Score=94.04 Aligned_cols=100 Identities=12% Similarity=0.110 Sum_probs=87.4
Q ss_pred cchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 014256 55 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 133 (428)
Q Consensus 55 ~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~a 133 (428)
.+|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|.+++.++|. ..+|+++|.+|..+|++++|+..|.++
T Consensus 2 ~~a~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLL--RFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 57899999999999988766 889999999999999999999999999998 889999999999999999999999999
Q ss_pred HhcCCC--CHHHHHHHHHHHHHcCC
Q 014256 134 LNLDDR--YIKAYSRRATARKELGK 156 (428)
Q Consensus 134 l~l~p~--~~~a~~~lg~~~~~lg~ 156 (428)
+.++|. +..+...+...+..+|+
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHHhcc
Confidence 999884 44555555555554443
No 164
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.20 E-value=1.1e-10 Score=120.31 Aligned_cols=158 Identities=8% Similarity=-0.028 Sum_probs=133.5
Q ss_pred ChhhhhcCCCccc-c-------CCCCc-------chHHHHHhhhh-cCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 014256 37 SLKSAKKPSPSGN-S-------YSRNY-------DPVSHISSSLM-NEESTPDATSEKELGNECFKQKKFKEAIDCYSRS 100 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~-------~g~~~-------~Ai~~~~~al~-~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~a 100 (428)
+...+...++..+ . .|+++ +|+..|++++. ..|++... |..+|..+...|++++|..+|+++
T Consensus 270 ~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l--~~~~~~~~~~~g~~~~A~~~~~~a 347 (530)
T 2ooe_A 270 HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLL--YFAYADYEESRMKYEKVHSIYNRL 347 (530)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHH--HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHH--HHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3344444455555 2 68887 89999999997 78887666 889999999999999999999999
Q ss_pred HccCCc-H-HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 101 IALSPT-A-VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 101 l~~~p~-~-~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~-~~~lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
+++.|. + .+|.++|.++...|++++|...|.+|+...|.....+...+.+ +...|++++|...|+++++..|+++.+
T Consensus 348 l~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~ 427 (530)
T 2ooe_A 348 LAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEY 427 (530)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred hCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHH
Confidence 999997 4 5899999999999999999999999999999888887777665 446999999999999999999999877
Q ss_pred H----------HHHHHHHHHHHHHHHhch
Q 014256 178 K----------KQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 178 ~----------~~l~~a~~~~~~a~~~~~ 196 (428)
+ ++..+|...|++++...|
T Consensus 428 ~~~~~~~~~~~g~~~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 428 VLAYIDYLSHLNEDNNTRVLFERVLTSGS 456 (530)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCHhhHHHHHHHHHhccC
Confidence 4 456678888888887654
No 165
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.19 E-value=3.4e-11 Score=109.13 Aligned_cols=152 Identities=9% Similarity=-0.059 Sum_probs=121.1
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhc----CHHHHHHHHHHHHccCCcHHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK----KFKEAIDCYSRSIALSPTAVAYA 111 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g----~~~~Ai~~y~~al~~~p~~~~~~ 111 (428)
+...+...+|..| ..+++++|+.+|+++.... +..+ ++.+|.+|.. + ++++|+.+|+++++.. ++.+++
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g--~~~a--~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g-~~~a~~ 89 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG--DGDA--LALLAQLKIR-NPQQADYPQARQLAEKAVEAG-SKSGEI 89 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT--CHHH--HHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT-CHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC--CHHH--HHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC-CHHHHH
Confidence 3445566666666 7789999999999998764 4445 7799999988 7 8999999999996542 288899
Q ss_pred HHHHHHHH----hcCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHHH---
Q 014256 112 NRAMAYLK----LRRFQEAEDDCTEALNLDD--RYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEIK--- 178 (428)
Q Consensus 112 nla~~~~~----~~~~~eA~~~~~~al~l~p--~~~~a~~~lg~~~~~----lg~~~eA~~~~~~al~l~P~~~~~~--- 178 (428)
++|.+|.. .+++++|+.+|.+++...+ .++.+++++|.+|.. .+++++|+.+|++++.+ |.++.+.
T Consensus 90 ~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~L 168 (212)
T 3rjv_A 90 VLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWA 168 (212)
T ss_dssp HHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHH
Confidence 99999988 8899999999999999988 458999999999998 88999999999999988 4444441
Q ss_pred --------H-----HHHHHHHHHHHHHHhc
Q 014256 179 --------K-----QLAEVKSLYEKEVFQK 195 (428)
Q Consensus 179 --------~-----~l~~a~~~~~~a~~~~ 195 (428)
+ ++.+|..+|+++....
T Consensus 169 g~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 169 GMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp HHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 1 4567777777777654
No 166
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.19 E-value=3.5e-12 Score=125.91 Aligned_cols=158 Identities=13% Similarity=0.098 Sum_probs=128.7
Q ss_pred hhcCCCccc-cCCC-----------------CcchHHHHHhhhhcCCC----CchHHHHHHHHHHHHHhcCHHHHHHHHH
Q 014256 41 AKKPSPSGN-SYSR-----------------NYDPVSHISSSLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYS 98 (428)
Q Consensus 41 a~~~~~~~y-~~g~-----------------~~~Ai~~~~~al~~~p~----~~~a~~~~~lg~~~~~~g~~~~Ai~~y~ 98 (428)
++..++..| ..|+ +++|+.+|.+++...+. ...+..+..+|.+++..|+|++|+.+|.
T Consensus 168 ~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 247 (411)
T 4a1s_A 168 ALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQ 247 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 444555566 7788 99999999998876421 2234458899999999999999999999
Q ss_pred HHHccCCc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHH
Q 014256 99 RSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSE 165 (428)
Q Consensus 99 ~al~~~p~-------~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~~~eA~~~~~ 165 (428)
+++.+.+. ..++.++|.+|..+|++++|+..+++++.+.+.. ..++..+|.++..+|++++|+..|+
T Consensus 248 ~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 327 (411)
T 4a1s_A 248 ERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHN 327 (411)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 99998653 3489999999999999999999999999988754 7789999999999999999999999
Q ss_pred HHHhhCCCcH------HH----------HHHHHHHHHHHHHHHHhchhh
Q 014256 166 FALRLEPQNQ------EI----------KKQLAEVKSLYEKEVFQKASK 198 (428)
Q Consensus 166 ~al~l~P~~~------~~----------~~~l~~a~~~~~~a~~~~~~~ 198 (428)
+++.+.+... .+ .+++.+|..+|++++.+....
T Consensus 328 ~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 376 (411)
T 4a1s_A 328 RHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAXXX 376 (411)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhhc
Confidence 9998865431 11 356778888888888776443
No 167
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.19 E-value=8e-12 Score=122.35 Aligned_cols=153 Identities=18% Similarity=0.155 Sum_probs=104.0
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhcC--------------------HHHHHHHH
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKK--------------------FKEAIDCY 97 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~----~a~~~~~lg~~~~~~g~--------------------~~~Ai~~y 97 (428)
..+|..| ..|++++|+.+|.+++...+... .+..+..+|.++...|+ |++|+.+|
T Consensus 91 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~ 170 (406)
T 3sf4_A 91 GNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFY 170 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHH
Confidence 3444445 67788888888887777654322 23346777888888888 88888888
Q ss_pred HHHHccC------Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHcCCHHHHHHHH
Q 014256 98 SRSIALS------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYI------KAYSRRATARKELGKLKESIEDS 164 (428)
Q Consensus 98 ~~al~~~------p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~------~a~~~lg~~~~~lg~~~eA~~~~ 164 (428)
.+++.+. +. ..++.++|.+|..+|++++|+..+.+++.+.+... .++.++|.++..+|++++|+..|
T Consensus 171 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 250 (406)
T 3sf4_A 171 EENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYY 250 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 7777652 22 55677788888888888888888888877755432 37777888888888888888888
Q ss_pred HHHHhhCCCc------HHH----------HHHHHHHHHHHHHHHHhc
Q 014256 165 EFALRLEPQN------QEI----------KKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 165 ~~al~l~P~~------~~~----------~~~l~~a~~~~~~a~~~~ 195 (428)
++++.+.|.. ..+ .+++.+|...+.+++...
T Consensus 251 ~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 297 (406)
T 3sf4_A 251 KKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 297 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 8887766543 111 245566666776666554
No 168
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.19 E-value=2.5e-11 Score=114.81 Aligned_cols=151 Identities=17% Similarity=0.166 Sum_probs=123.2
Q ss_pred Cccc-cCCCCcchHHHHHhhhhcCCCCch--HHHHHHHHHHHHHhcCHHHHHHHHHHHHccC------Cc-HHHHHHHHH
Q 014256 46 PSGN-SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYANRAM 115 (428)
Q Consensus 46 ~~~y-~~g~~~~Ai~~~~~al~~~p~~~~--a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~------p~-~~~~~nla~ 115 (428)
|..+ ..|++++|+..|++++...|.+.. +..+..+|.+++..|++++|+.+|.+++.+. +. ..++.++|.
T Consensus 12 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~ 91 (338)
T 3ro2_A 12 GERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGN 91 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHH
Confidence 4444 789999999999999999988753 4558899999999999999999999998872 23 678999999
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHh
Q 014256 116 AYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGK--------------------LKESIEDSEFALR 169 (428)
Q Consensus 116 ~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~--------------------~~eA~~~~~~al~ 169 (428)
+|..+|++++|+..+.+++.+.+.. ..++..+|.++..+|+ +++|+..+++++.
T Consensus 92 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~ 171 (338)
T 3ro2_A 92 TLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLS 171 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999886643 4589999999999999 9999999999987
Q ss_pred hCCC---c---HHH----------HHHHHHHHHHHHHHHHhch
Q 014256 170 LEPQ---N---QEI----------KKQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 170 l~P~---~---~~~----------~~~l~~a~~~~~~a~~~~~ 196 (428)
+.+. . ..+ .+++.+|...+.+++...+
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 172 LVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6321 1 111 3556777777777776553
No 169
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.18 E-value=2.7e-11 Score=98.72 Aligned_cols=111 Identities=14% Similarity=0.146 Sum_probs=97.3
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc--------HHHHHHH
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANR 113 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~--------~~~~~nl 113 (428)
..+|..+ ..|++++|+.+|.+++..+|.+..+ +..+|.++...|+|++|+.+|.+++...|. ..+++++
T Consensus 8 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~l 85 (131)
T 1elr_A 8 KELGNDAYKKKDFDTALKHYDKAKELDPTNMTY--ITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARI 85 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHH--HHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHH
Confidence 3445555 7899999999999999999987666 789999999999999999999999998764 5689999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 014256 114 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 156 (428)
Q Consensus 114 a~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~ 156 (428)
|.+|..+|++++|+..|.+++.++| +...+..++.+...+++
T Consensus 86 a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 86 GNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 68888888887766543
No 170
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.16 E-value=3.5e-10 Score=86.59 Aligned_cols=82 Identities=33% Similarity=0.486 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 152 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~ 152 (428)
+..+..+|.+++..|+|++|+.+|.+++..+|. ..+++++|.++..+|++++|+..|.+++.++|.++.++.++|.++.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 344778888888888888888888888888887 7788888888888888888888888888888888888888888887
Q ss_pred HcC
Q 014256 153 ELG 155 (428)
Q Consensus 153 ~lg 155 (428)
.+|
T Consensus 89 ~~g 91 (91)
T 1na3_A 89 KQG 91 (91)
T ss_dssp HHC
T ss_pred hcC
Confidence 654
No 171
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.14 E-value=1.6e-10 Score=90.57 Aligned_cols=87 Identities=16% Similarity=0.318 Sum_probs=59.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH--HHHHHHHHH
Q 014256 111 ANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK-AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK--KQLAEVKSL 187 (428)
Q Consensus 111 ~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~-a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~--~~l~~a~~~ 187 (428)
+++|.+++..|+|++|+..|++++..+|+++. +++++|.++..+|++++|+..|++++.++|++..+. ..+.++...
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~~ 83 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILNF 83 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 45666677777777777777777777777766 777777777777777777777777777777766665 666666666
Q ss_pred HHHHHHhchh
Q 014256 188 YEKEVFQKAS 197 (428)
Q Consensus 188 ~~~a~~~~~~ 197 (428)
|++.+..+|.
T Consensus 84 ~~~~~~~~p~ 93 (99)
T 2kc7_A 84 YNKDMYNQLE 93 (99)
T ss_dssp HCCTTHHHHC
T ss_pred HHHHhccCcc
Confidence 6665555543
No 172
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.14 E-value=7.8e-11 Score=104.20 Aligned_cols=134 Identities=12% Similarity=0.064 Sum_probs=111.5
Q ss_pred hhhhcCCCccc-cCCCCcchHHHHHhhhhcCCC----CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc------CC-c
Q 014256 39 KSAKKPSPSGN-SYSRNYDPVSHISSSLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYSRSIAL------SP-T 106 (428)
Q Consensus 39 ~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~----~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~------~p-~ 106 (428)
..++..+|..| ..|++++|+.+|.+++..... ...+..+..+|.++...|++++|+.+|.+++.+ ++ .
T Consensus 26 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 105 (203)
T 3gw4_A 26 SGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLA 105 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 34556677777 899999999999999984221 123455889999999999999999999999998 33 2
Q ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 014256 107 -AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR--Y----IKAYSRRATARKELGKLKESIEDSEFALRLEP 172 (428)
Q Consensus 107 -~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~--~----~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P 172 (428)
..++.++|.++..+|++++|+..+.+++.+.+. + ..++.++|.++..+|++++|...+++++.+..
T Consensus 106 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 106 ASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 567999999999999999999999999976432 2 34578999999999999999999999998754
No 173
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.13 E-value=1.2e-10 Score=92.19 Aligned_cols=102 Identities=14% Similarity=0.103 Sum_probs=91.5
Q ss_pred ChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc---HHHHHH
Q 014256 37 SLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYAN 112 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~~n 112 (428)
+...++..+|..+ ..|++++|+..|.+++..+|....+ +..+|.+++..|+|++|+.+|++++..+|. ..++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~--~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKY--WLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHH--HHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 3344555666666 8899999999999999999987766 789999999999999999999999999986 788999
Q ss_pred HHHHHHHh-cCHHHHHHHHHHHHhcCCCC
Q 014256 113 RAMAYLKL-RRFQEAEDDCTEALNLDDRY 140 (428)
Q Consensus 113 la~~~~~~-~~~~eA~~~~~~al~l~p~~ 140 (428)
+|.++..+ |++++|+..+.+++..+|..
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99999999 99999999999999999875
No 174
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.12 E-value=8.7e-11 Score=92.16 Aligned_cols=89 Identities=17% Similarity=0.163 Sum_probs=81.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHccCCc-HH-HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 014256 78 KELGNECFKQKKFKEAIDCYSRSIALSPT-AV-AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 155 (428)
Q Consensus 78 ~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~-~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg 155 (428)
+.+|..++..|+|++|+.+|++++..+|+ .. +|+++|.+|..+|++++|+..|.+++.++|++..++++ +
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~ 75 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------K 75 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------H
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------H
Confidence 47899999999999999999999999998 88 99999999999999999999999999999999988755 6
Q ss_pred CHHHHHHHHHHHHhhCCCc
Q 014256 156 KLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 156 ~~~eA~~~~~~al~l~P~~ 174 (428)
.+.+++..|++++.++|++
T Consensus 76 ~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 76 MVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHHhccCccc
Confidence 6778888888888887765
No 175
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.11 E-value=2.9e-11 Score=114.35 Aligned_cols=128 Identities=20% Similarity=0.206 Sum_probs=74.6
Q ss_pred CCccc-cCCCCcchHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhcC--------------------HHHHHHHHHH
Q 014256 45 SPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKK--------------------FKEAIDCYSR 99 (428)
Q Consensus 45 ~~~~y-~~g~~~~Ai~~~~~al~~~p~~~----~a~~~~~lg~~~~~~g~--------------------~~~Ai~~y~~ 99 (428)
++..| ..|++++|+..|.+++...+... .+..+..+|.++...|+ +++|+.+|.+
T Consensus 89 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~ 168 (338)
T 3ro2_A 89 LGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEE 168 (338)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 33444 56666666666666665543221 12335566666666666 6666666666
Q ss_pred HHccC------Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 014256 100 SIALS------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEF 166 (428)
Q Consensus 100 al~~~------p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~lg~~~~~lg~~~eA~~~~~~ 166 (428)
++.+. +. ..++.++|.++..+|++++|+..+.+++.+.+.. ..++..+|.++...|++++|+..+++
T Consensus 169 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 248 (338)
T 3ro2_A 169 NLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKK 248 (338)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 65542 11 4456666666666666666666666666554332 22566666666666666666666666
Q ss_pred HHhhCC
Q 014256 167 ALRLEP 172 (428)
Q Consensus 167 al~l~P 172 (428)
++.+.+
T Consensus 249 al~~~~ 254 (338)
T 3ro2_A 249 TLLLAR 254 (338)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 176
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.11 E-value=4.1e-10 Score=115.97 Aligned_cols=143 Identities=13% Similarity=0.067 Sum_probs=127.0
Q ss_pred chHHHHHhhhhcCCCCchHHHHHHHHHHHHH-------hcCHH-------HHHHHHHHHHc-cCCc-HHHHHHHHHHHHH
Q 014256 56 DPVSHISSSLMNEESTPDATSEKELGNECFK-------QKKFK-------EAIDCYSRSIA-LSPT-AVAYANRAMAYLK 119 (428)
Q Consensus 56 ~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~-------~g~~~-------~Ai~~y~~al~-~~p~-~~~~~nla~~~~~ 119 (428)
.++..|++++..+|.+..+ |..+|..+.. .|+++ +|+.+|++++. +.|+ ..+|.++|..+..
T Consensus 256 ~a~~~y~~al~~~p~~~~~--w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~ 333 (530)
T 2ooe_A 256 RVMFAYEQCLLVLGHHPDI--WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEES 333 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHH--HHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHh
Confidence 6778999999999998777 8899999986 79987 99999999997 7898 9999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH-----------HHHHHHHHHH
Q 014256 120 LRRFQEAEDDCTEALNLDDRYI-KAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI-----------KKQLAEVKSL 187 (428)
Q Consensus 120 ~~~~~eA~~~~~~al~l~p~~~-~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~-----------~~~l~~a~~~ 187 (428)
.|++++|...|++++.++|.++ .+|..+|.++...|++++|...|.++++..|..... .++..+|...
T Consensus 334 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~ 413 (530)
T 2ooe_A 334 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKI 413 (530)
T ss_dssp TTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHH
Confidence 9999999999999999999986 699999999999999999999999999998875432 2345788999
Q ss_pred HHHHHHhchhhhH
Q 014256 188 YEKEVFQKASKTL 200 (428)
Q Consensus 188 ~~~a~~~~~~~~~ 200 (428)
|++++...|.++.
T Consensus 414 ~e~al~~~p~~~~ 426 (530)
T 2ooe_A 414 FELGLKKYGDIPE 426 (530)
T ss_dssp HHHHHHHHTTCHH
T ss_pred HHHHHHHCCCCHH
Confidence 9999998876654
No 177
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.11 E-value=4.1e-10 Score=109.65 Aligned_cols=149 Identities=15% Similarity=0.035 Sum_probs=130.5
Q ss_pred ccChhhhhcCCCccc-cCC-CCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHccCCc-HHH
Q 014256 35 SSSLKSAKKPSPSGN-SYS-RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-K-KFKEAIDCYSRSIALSPT-AVA 109 (428)
Q Consensus 35 ~~~~~~a~~~~~~~y-~~g-~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~-g-~~~~Ai~~y~~al~~~p~-~~~ 109 (428)
.+++-.+...-+.++ ..| .+++++..+..++..+|.+..+ |..++.++... + ++++++.++.++++.+|. ..+
T Consensus 84 nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~a--W~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~A 161 (349)
T 3q7a_A 84 NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQV--WHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHT 161 (349)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHH--HHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHH
T ss_pred CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHH
Confidence 344444443334444 556 5899999999999999999888 88999999998 8 999999999999999998 999
Q ss_pred HHHHHHHHHHhcCHH--------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHhhCCCc
Q 014256 110 YANRAMAYLKLRRFQ--------EAEDDCTEALNLDDRYIKAYSRRATARKELGK-------LKESIEDSEFALRLEPQN 174 (428)
Q Consensus 110 ~~nla~~~~~~~~~~--------eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~-------~~eA~~~~~~al~l~P~~ 174 (428)
|..|+.+...++.++ ++++.+++++..+|.|..||+.++.++..+|. ++++++.+.+++.++|+|
T Consensus 162 W~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n 241 (349)
T 3q7a_A 162 WAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHN 241 (349)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999888 99999999999999999999999999999997 799999999999999999
Q ss_pred HHHHHHHHHHH
Q 014256 175 QEIKKQLAEVK 185 (428)
Q Consensus 175 ~~~~~~l~~a~ 185 (428)
..++..+.-..
T Consensus 242 ~SaW~Ylr~Ll 252 (349)
T 3q7a_A 242 VSAWNYLRGFL 252 (349)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99987665543
No 178
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.08 E-value=6e-10 Score=105.27 Aligned_cols=119 Identities=13% Similarity=0.041 Sum_probs=101.3
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCC-HHHHHHHHHHHHHcCC
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLD-DRY-IKAYSRRATARKELGK 156 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~~~~~~al~l~-p~~-~~a~~~lg~~~~~lg~ 156 (428)
.++..+...|+|++|.+.|..++...|....++.+|.++++.++|++|+..|+.++... |.. ..+++.+|.++..+|+
T Consensus 107 ayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~ 186 (282)
T 4f3v_A 107 GFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLAL 186 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCC
Confidence 46788999999999999999999988983399999999999999999999999887764 222 3589999999999999
Q ss_pred HHHHHHHHHHHHhhC--CC-cHHH----------HHHHHHHHHHHHHHHHhchh
Q 014256 157 LKESIEDSEFALRLE--PQ-NQEI----------KKQLAEVKSLYEKEVFQKAS 197 (428)
Q Consensus 157 ~~eA~~~~~~al~l~--P~-~~~~----------~~~l~~a~~~~~~a~~~~~~ 197 (428)
+++|+..|++++.-. |. ..++ .++.++|...|++++..+|.
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999998544 54 3333 56789999999999999987
No 179
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.07 E-value=1.5e-09 Score=98.26 Aligned_cols=139 Identities=9% Similarity=-0.093 Sum_probs=116.5
Q ss_pred ChhhhhcCCCccccCC----CCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hcCHHHHHHHHHHHHccCCc--
Q 014256 37 SLKSAKKPSPSGNSYS----RNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPT-- 106 (428)
Q Consensus 37 ~~~~a~~~~~~~y~~g----~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~----~g~~~~Ai~~y~~al~~~p~-- 106 (428)
+...+...+|..|..+ ++++|+.+|+++... .+..+ ++.+|.+|.. .+++.+|+.+|.++++..+.
T Consensus 48 g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~--g~~~a--~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 123 (212)
T 3rjv_A 48 GDGDALALLAQLKIRNPQQADYPQARQLAEKAVEA--GSKSG--EIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA 123 (212)
T ss_dssp TCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHT--TCHHH--HHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHC--CCHHH--HHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc
Confidence 4445666667777336 899999999999765 45555 7799999998 88999999999999999984
Q ss_pred -HHHHHHHHHHHHH----hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHhhCCCcH
Q 014256 107 -AVAYANRAMAYLK----LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL-G-----KLKESIEDSEFALRLEPQNQ 175 (428)
Q Consensus 107 -~~~~~nla~~~~~----~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~l-g-----~~~eA~~~~~~al~l~P~~~ 175 (428)
+.+++++|.+|.. .+++++|+.+|++++.+ +.++.+++++|.+|... | ++++|+.+|+++.... +.
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g--~~ 200 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG--FD 200 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT--CH
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC--CH
Confidence 8899999999999 88999999999999999 77788999999999865 3 8999999999999884 44
Q ss_pred HHHHHHH
Q 014256 176 EIKKQLA 182 (428)
Q Consensus 176 ~~~~~l~ 182 (428)
.+...+.
T Consensus 201 ~A~~~l~ 207 (212)
T 3rjv_A 201 TGCEEFD 207 (212)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 180
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.07 E-value=4.8e-10 Score=94.25 Aligned_cols=123 Identities=16% Similarity=0.206 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY----- 140 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~----- 140 (428)
.+..+..+|.+++..|+|++|+.+|.+++.+.+. ..++.++|.++..+|++++|+..+.+++.+.+..
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 87 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHH
Confidence 3456889999999999999999999999987543 3589999999999999999999999999886543
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc--HH----H----------HHHHHHHHHHHHHHHHhc
Q 014256 141 -IKAYSRRATARKELGKLKESIEDSEFALRLEPQN--QE----I----------KKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 141 -~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~--~~----~----------~~~l~~a~~~~~~a~~~~ 195 (428)
..+++++|.++..+|++++|+..+++++.+.+.. .. + .+++.+|...+.+++...
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 88 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999874321 11 1 345566666666665543
No 181
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.01 E-value=1.8e-09 Score=85.45 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=61.3
Q ss_pred CCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 014256 104 SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 104 ~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~ 174 (428)
+|+ +.+++++|.+|+.+|+|++|+..|++++.++|+++.+|+++|.++..+|++++|+..|++++.+.|.+
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 566 78889999999999999999999999999999999999999999999999999999999999887643
No 182
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.01 E-value=5.6e-09 Score=79.71 Aligned_cols=79 Identities=34% Similarity=0.412 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 185 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 185 (428)
+.+++++|.++...|++++|+..|.+++.++|.++.+++++|.++...|++++|+..|++++.++|++..+...+..+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999999999999999998877666553
No 183
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.99 E-value=2.9e-09 Score=103.88 Aligned_cols=145 Identities=10% Similarity=0.012 Sum_probs=118.6
Q ss_pred cCCCCcchHHHHHhhhhcCCCCc---hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------HHHHHHHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTP---DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLK 119 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~---~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~nla~~~~~ 119 (428)
..|++++|+..+++++...|... .+..+..+|.++...|++++|+..|.+++.+.+. ..++.++|.++..
T Consensus 26 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 105 (373)
T 1hz4_A 26 NDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA 105 (373)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 67999999999999999877543 2335778999999999999999999999987543 3457899999999
Q ss_pred hcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH-----HH---------
Q 014256 120 LRRFQEAEDDCTEALNLD--------DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ-----EI--------- 177 (428)
Q Consensus 120 ~~~~~eA~~~~~~al~l~--------p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~-----~~--------- 177 (428)
+|++++|+..|.+++.+. |....++.++|.++...|++++|...+++++.+.+... ..
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 185 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSL 185 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHH
Confidence 999999999999999875 34567788999999999999999999999999987531 11
Q ss_pred -HHHHHHHHHHHHHHHHh
Q 014256 178 -KKQLAEVKSLYEKEVFQ 194 (428)
Q Consensus 178 -~~~l~~a~~~~~~a~~~ 194 (428)
.+++.+|...+++++..
T Consensus 186 ~~g~~~~A~~~l~~a~~~ 203 (373)
T 1hz4_A 186 ARGDLDNARSQLNRLENL 203 (373)
T ss_dssp HHTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 34566677777766654
No 184
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.99 E-value=4.8e-09 Score=83.18 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~ 174 (428)
+..++++|.+++..|+|++|+..|++++.++|.++.+++++|.++..+|++++|+..|++++.++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 56789999999999999999999999999999999999999999999999999999999999999998
No 185
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.96 E-value=2.4e-09 Score=84.67 Aligned_cols=87 Identities=17% Similarity=0.249 Sum_probs=72.1
Q ss_pred CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CHHHH
Q 014256 68 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR--YIKAY 144 (428)
Q Consensus 68 ~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~--~~~a~ 144 (428)
+|++..+ ++.+|.+|+..|+|++|+.+|+++++++|+ +.+|+++|.+|..+|++++|+..|++++.+.|. +..+.
T Consensus 3 ~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~ 80 (100)
T 3ma5_A 3 DPEDPFT--RYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDL 80 (100)
T ss_dssp --CCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred CccCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHH
Confidence 5666666 889999999999999999999999999999 889999999999999999999999999998764 44445
Q ss_pred HHHHHHHHHcCC
Q 014256 145 SRRATARKELGK 156 (428)
Q Consensus 145 ~~lg~~~~~lg~ 156 (428)
..+..++...+.
T Consensus 81 ~~l~~~l~~~~~ 92 (100)
T 3ma5_A 81 SELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHccc
Confidence 555555544443
No 186
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.86 E-value=3.4e-08 Score=100.53 Aligned_cols=136 Identities=15% Similarity=0.063 Sum_probs=78.9
Q ss_pred CCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhc---C
Q 014256 51 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-----KKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLR---R 122 (428)
Q Consensus 51 ~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~-----g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~---~ 122 (428)
.+++++|+.+|+++.... +..+ ++.+|.+|... +++++|+.+|.++++..+ +.+++++|.+|...| +
T Consensus 272 ~~d~~~A~~~~~~a~~~~--~~~a--~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~-~~a~~~lg~~y~~~g~~~~ 346 (490)
T 2xm6_A 272 AKEPLKALEWYRKSAEQG--NSDG--QYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGD-ATAQANLGAIYFRLGSEEE 346 (490)
T ss_dssp SCCHHHHHHHHHHHHTTT--CHHH--HHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHSCCHHH
T ss_pred CCCHHHHHHHHHHHHHcC--CHHH--HHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhCCCccc
Confidence 566666666666665542 2333 55666666665 666666666666665432 455666666666544 5
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHH--------------HHHHHHH
Q 014256 123 FQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEI--------------KKQLAEV 184 (428)
Q Consensus 123 ~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~----lg~~~eA~~~~~~al~l~P~~~~~--------------~~~l~~a 184 (428)
+++|+.+|++++.. .++.+++++|.+|.. .+++++|+..|++++... ++.+ .+++.+|
T Consensus 347 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A 422 (490)
T 2xm6_A 347 HKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQA 422 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 66666666666655 456666666666666 566666666666666543 2222 1234556
Q ss_pred HHHHHHHHHhc
Q 014256 185 KSLYEKEVFQK 195 (428)
Q Consensus 185 ~~~~~~a~~~~ 195 (428)
...|++++...
T Consensus 423 ~~~~~~A~~~~ 433 (490)
T 2xm6_A 423 WAWFDTASTND 433 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHCC
Confidence 66666666655
No 187
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.85 E-value=7.3e-09 Score=105.88 Aligned_cols=119 Identities=9% Similarity=-0.032 Sum_probs=86.3
Q ss_pred cCCCCcchHHHHHhhhhcC-----CCCc-hHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc-----C---Cc-HHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNE-----ESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIAL-----S---PT-AVAYANRA 114 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~-----p~~~-~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~-----~---p~-~~~~~nla 114 (428)
.+|+|++|+..|+++|.+. ++++ .+..+.++|.+|..+|+|++|+.+|++++.+ . |+ +..++|+|
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 6788888888888887752 2222 3455778888888888888888888888765 2 22 56688888
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 014256 115 MAYLKLRRFQEAEDDCTEALNL-----DDRYI---KAYSRRATARKELGKLKESIEDSEFAL 168 (428)
Q Consensus 115 ~~~~~~~~~~eA~~~~~~al~l-----~p~~~---~a~~~lg~~~~~lg~~~eA~~~~~~al 168 (428)
.+|..+|+|++|+..|.+|+.+ .|+++ .....++.++..+|+|++|...|.++.
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~ 462 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMR 462 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888888754 45553 456677778878888877777776653
No 188
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.82 E-value=3.8e-08 Score=82.81 Aligned_cols=111 Identities=12% Similarity=-0.002 Sum_probs=100.0
Q ss_pred CCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHH----hcCHHHHH
Q 014256 52 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LRRFQEAE 127 (428)
Q Consensus 52 g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~----~~~~~eA~ 127 (428)
+++++|+.+|.++.... +..+ . +|.+|...+.+++|+.+|+++.+.. ++.+++++|.+|.. .+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g--~~~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~g-~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN--EMFG--C--LSLVSNSQINKQKLFQYLSKACELN-SGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTT--CTTH--H--HHHHTCTTSCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCC--CHhh--h--HHHHHHcCCCHHHHHHHHHHHHcCC-CHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 57789999999999886 3345 3 9999999999999999999999873 38899999999999 89999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Q 014256 128 DDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLE 171 (428)
Q Consensus 128 ~~~~~al~l~p~~~~a~~~lg~~~~~----lg~~~eA~~~~~~al~l~ 171 (428)
.+|+++... .++.+++++|.+|.. .+++++|+.+|+++.+..
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 999999987 789999999999999 899999999999999884
No 189
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.82 E-value=2.5e-08 Score=101.46 Aligned_cols=150 Identities=16% Similarity=-0.004 Sum_probs=105.5
Q ss_pred ChhhhhcCCCccc-c----CCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hcCHHHHHHHHHHHHccCCcH
Q 014256 37 SLKSAKKPSPSGN-S----YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTA 107 (428)
Q Consensus 37 ~~~~a~~~~~~~y-~----~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~----~g~~~~Ai~~y~~al~~~p~~ 107 (428)
+...+...++..| . .+++++|+.+|++++... +..+ ++.+|.+|.. .+++++|+.+|+++++.. ++
T Consensus 217 ~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~~~a--~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~-~~ 291 (490)
T 2xm6_A 217 GDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQG--NSIA--QFRLGYILEQGLAGAKEPLKALEWYRKSAEQG-NS 291 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTT--CHHH--HHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTT-CH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHH--HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcC-CH
Confidence 3344555555555 2 677888888888887654 3333 6678888877 788888888888887653 26
Q ss_pred HHHHHHHHHHHHh-----cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCcHHH--
Q 014256 108 VAYANRAMAYLKL-----RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG---KLKESIEDSEFALRLEPQNQEI-- 177 (428)
Q Consensus 108 ~~~~nla~~~~~~-----~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg---~~~eA~~~~~~al~l~P~~~~~-- 177 (428)
.+++++|.+|... +++++|+.+|.++++. .++.+++++|.++...| ++++|+..|++++.. +++.+
T Consensus 292 ~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~ 367 (490)
T 2xm6_A 292 DGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQF 367 (490)
T ss_dssp HHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHH
Confidence 6777888888877 7888888888888775 45677888888887766 677888888888876 33433
Q ss_pred ------------HHHHHHHHHHHHHHHHhc
Q 014256 178 ------------KKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 178 ------------~~~l~~a~~~~~~a~~~~ 195 (428)
..++.+|...|++++...
T Consensus 368 ~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~ 397 (490)
T 2xm6_A 368 NLGNALLQGKGVKKDEQQAAIWMRKAAEQG 397 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHhCC
Confidence 134566777777777654
No 190
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.81 E-value=7.5e-09 Score=100.92 Aligned_cols=132 Identities=12% Similarity=0.036 Sum_probs=111.7
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC--------Cc-
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT- 106 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~----~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~--------p~- 106 (428)
++..++..| ..|++++|+..|.+++...+... .+..+..+|.++...|+|++|+.+|.+++.+. |.
T Consensus 55 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 55 ATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 344555556 78999999999999998765432 23447789999999999999999999999874 33
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR-----YIKAYSRRATARKELGKLKESIEDSEFALRLEP 172 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~-----~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P 172 (428)
..++.++|.++...|++++|+..+.+++.+.+. ...++..+|.++...|++++|...+++++.+.+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 567889999999999999999999999998764 356889999999999999999999999998743
No 191
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.78 E-value=5.8e-08 Score=99.23 Aligned_cols=101 Identities=10% Similarity=0.024 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHcc-----CC---c-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC--
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIAL-----SP---T-AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDRY-- 140 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~-----~p---~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l-----~p~~-- 140 (428)
..+.+..+..+|+|++|+..|++++++ .| + ...+.|+|.+|..+|+|++|+..+.+++.+ .|++
T Consensus 312 ~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 391 (490)
T 3n71_A 312 TLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ 391 (490)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 344556677899999999999999986 23 2 678999999999999999999999999965 3444
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCcHHH
Q 014256 141 -IKAYSRRATARKELGKLKESIEDSEFALRL-----EPQNQEI 177 (428)
Q Consensus 141 -~~a~~~lg~~~~~lg~~~eA~~~~~~al~l-----~P~~~~~ 177 (428)
...++++|.+|..+|+|++|+..|++++.+ -|+++..
T Consensus 392 ~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 434 (490)
T 3n71_A 392 LGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPIT 434 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHH
Confidence 567999999999999999999999999975 4777665
No 192
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.75 E-value=1.7e-08 Score=102.24 Aligned_cols=126 Identities=10% Similarity=0.009 Sum_probs=84.4
Q ss_pred hhcCCCccc-cCC---CCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh----cCHHHHHHHHHHHHccCCc-HHHHH
Q 014256 41 AKKPSPSGN-SYS---RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ----KKFKEAIDCYSRSIALSPT-AVAYA 111 (428)
Q Consensus 41 a~~~~~~~y-~~g---~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~----g~~~~Ai~~y~~al~~~p~-~~~~~ 111 (428)
+...+|..| ..| ++++|+.+|.++....+..... ++.+|.+|... +++++|+.+|+++. |. +.+++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~--~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~ 252 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQR--VDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWV 252 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHH--HHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHH--HHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHH
Confidence 444445455 556 7777777777777776554433 45777777554 57777777777776 54 66777
Q ss_pred HHHHH-H--HHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhhCCCcHHH
Q 014256 112 NRAMA-Y--LKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-----KLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 112 nla~~-~--~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg-----~~~eA~~~~~~al~l~P~~~~~ 177 (428)
++|.+ | ...+++++|+.+|++++..+ ++.+++++|.+|. .| ++++|+.+|+++. |+++.+
T Consensus 253 ~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A 320 (452)
T 3e4b_A 253 SLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAA 320 (452)
T ss_dssp HHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHH
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHH
Confidence 77777 3 35667777777777777543 6777777777776 45 7777777777777 666655
No 193
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.72 E-value=6.7e-08 Score=92.41 Aligned_cols=136 Identities=10% Similarity=-0.013 Sum_probs=85.0
Q ss_pred hHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC--c-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 014256 57 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEA 133 (428)
Q Consensus 57 Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p--~-~~~~~nla~~~~~~~~~~eA~~~~~~a 133 (428)
|+..|++.+...+....+ +..+|.++...|++++|+.++.+++..+| + ..++..++.+++++|+.+.|...+++.
T Consensus 85 a~~~l~~l~~~~~~~~~~--~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYE--LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp CCHHHHHTTTTSCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHH--HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 677777776654333333 45677777777777777777777777765 3 666777777777777777777777777
Q ss_pred HhcCCC----CHHHHHHH--HHHHHHcC--CHHHHHHHHHHHHhhCCC--cHHH-------HHHHHHHHHHHHHHHHh
Q 014256 134 LNLDDR----YIKAYSRR--ATARKELG--KLKESIEDSEFALRLEPQ--NQEI-------KKQLAEVKSLYEKEVFQ 194 (428)
Q Consensus 134 l~l~p~----~~~a~~~l--g~~~~~lg--~~~eA~~~~~~al~l~P~--~~~~-------~~~l~~a~~~~~~a~~~ 194 (428)
...+|+ +-.....+ |.+....| ++++|...|+++....|+ .... .+++.+|...++..+..
T Consensus 163 ~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 163 TNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSH
T ss_pred HhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 777762 12223333 33344445 677777777777666665 2111 45566666666655544
No 194
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.71 E-value=1.2e-07 Score=80.62 Aligned_cols=94 Identities=13% Similarity=0.039 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcC-C-CCHHHHHHHHHHHHHcCCHHHHHH
Q 014256 89 KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR---RFQEAEDDCTEALNLD-D-RYIKAYSRRATARKELGKLKESIE 162 (428)
Q Consensus 89 ~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~---~~~eA~~~~~~al~l~-p-~~~~a~~~lg~~~~~lg~~~eA~~ 162 (428)
....+...|.+.+..++. ..+.+++|.|+.+.+ ++++++..++..++.+ | .+..++|++|.+++++|+|++|+.
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 345667777877776665 889999999999988 7779999999999998 7 678999999999999999999999
Q ss_pred HHHHHHhhCCCcHHHHHHHH
Q 014256 163 DSEFALRLEPQNQEIKKQLA 182 (428)
Q Consensus 163 ~~~~al~l~P~~~~~~~~l~ 182 (428)
+++++|+++|+|.++..-..
T Consensus 93 y~~~lL~ieP~n~QA~~Lk~ 112 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKELER 112 (152)
T ss_dssp HHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHH
Confidence 99999999999998864433
No 195
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.69 E-value=9.7e-08 Score=91.28 Aligned_cols=155 Identities=8% Similarity=-0.082 Sum_probs=116.3
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCC--CCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC-----cHHHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEE--STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP-----TAVAYAN 112 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p--~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p-----~~~~~~n 112 (428)
++..+|.++ ..|++++|+..+.+.+..+| ...++ ....+.++.+.|+.+.|...+++..+.+| +..+..+
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea--~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~ 179 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTEL--LLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILN 179 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHH
Confidence 334666776 77899999999999988886 55555 55888999999999999999999888888 2333444
Q ss_pred HH--HHHHHhc--CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------CCCcHH
Q 014256 113 RA--MAYLKLR--RFQEAEDDCTEALNLDDR--YIKAYSRRATARKELGKLKESIEDSEFALRL----------EPQNQE 176 (428)
Q Consensus 113 la--~~~~~~~--~~~eA~~~~~~al~l~p~--~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l----------~P~~~~ 176 (428)
++ .+.+..| ++.+|...|+++....|+ .+..+++ ++..+|++++|...++.++++ +|+++.
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~ 256 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPT 256 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHH
Confidence 44 4466666 899999999998888876 3334444 888999999999999887776 477877
Q ss_pred HHHHH--------HHHHHHHHHHHHhchhhhH
Q 014256 177 IKKQL--------AEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 177 ~~~~l--------~~a~~~~~~a~~~~~~~~~ 200 (428)
+..++ .++.+++.+.....|.++.
T Consensus 257 ~LaN~i~l~~~lgk~a~~l~~qL~~~~P~hp~ 288 (310)
T 3mv2_B 257 FLANQITLALMQGLDTEDLTNQLVKLDHEHAF 288 (310)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHTTCCCHH
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHhCCCChH
Confidence 75332 2567788888888888776
No 196
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.67 E-value=8.7e-09 Score=102.27 Aligned_cols=137 Identities=8% Similarity=-0.030 Sum_probs=114.3
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchH----HHHHHHHHHHHHhcCHHHHHHHHHHHHccCC-----
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDA----TSEKELGNECFKQKKFKEAIDCYSRSIALSP----- 105 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a----~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p----- 105 (428)
+....++..+|..| ..|++++|+++|.+++...+....+ .....+|.++...|+++.|+.+|.+++...+
T Consensus 52 ~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 131 (434)
T 4b4t_Q 52 NEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRV 131 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCC
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCcc
Confidence 34455677788888 8999999999999999876654433 3356788888889999999999999987632
Q ss_pred -c-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 014256 106 -T-AVAYANRAMAYLKLRRFQEAEDDCTEALNL------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 172 (428)
Q Consensus 106 -~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l------~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P 172 (428)
. +.++.++|.+|..+|+|.+|...+.+++.. .+....++..+|.+|..+|+|.+|...+++++.+.+
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 132 FLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 2 778999999999999999999999998865 234477899999999999999999999999998753
No 197
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.65 E-value=4e-08 Score=97.43 Aligned_cols=147 Identities=14% Similarity=0.010 Sum_probs=118.0
Q ss_pred cCCCCcchHHHHHhhhhcCCCCch---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-------H
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPD---------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------A 107 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~---------------a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-------~ 107 (428)
..|+|++|++.|.+++...+.... ..++..+|.+|...|+|++|+++|.+++...+. .
T Consensus 16 ~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 95 (434)
T 4b4t_Q 16 NEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVK 95 (434)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHH
Confidence 568999999999999998876432 123779999999999999999999999886543 3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------cH
Q 014256 108 VAYANRAMAYLKLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ------NQ 175 (428)
Q Consensus 108 ~~~~nla~~~~~~~~~~eA~~~~~~al~l~p------~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~------~~ 175 (428)
.+..++|.++...|++++|+..|..++.+.+ ....++.++|.++...|+|.+|...+.+++..... ..
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 175 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV 175 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHH
Confidence 4567789999999999999999999987643 34778999999999999999999999999876321 11
Q ss_pred HH----------HHHHHHHHHHHHHHHHhch
Q 014256 176 EI----------KKQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 176 ~~----------~~~l~~a~~~~~~a~~~~~ 196 (428)
++ .+++.+|...+++++...+
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 11 4567788888888876653
No 198
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.65 E-value=2.1e-07 Score=94.13 Aligned_cols=135 Identities=10% Similarity=0.002 Sum_probs=111.1
Q ss_pred CCCcchHHHHHhhhhcCCCCchHHHHHHHHHH-H--HHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhc-----CH
Q 014256 52 SRNYDPVSHISSSLMNEESTPDATSEKELGNE-C--FKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLR-----RF 123 (428)
Q Consensus 52 g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~-~--~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~-----~~ 123 (428)
+++++|+.+|+++. |.+..+ ++.+|.+ + ...+++++|+.+|+++++.. ++.+++++|.+|. .| ++
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a--~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g-~~~A~~~Lg~~y~-~G~g~~~d~ 303 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPAS--WVSLAQLLYDFPELGDVEQMMKYLDNGRAAD-QPRAELLLGKLYY-EGKWVPADA 303 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHH--HHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHH-HCSSSCCCH
T ss_pred CCHHHHHHHHHHHc---CCCHHH--HHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHH-cCCCCCCCH
Confidence 68999999999998 667777 7799998 4 46899999999999999764 4889999999998 66 99
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCcHHH------------HHHHHHHHHH
Q 014256 124 QEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEI------------KKQLAEVKSL 187 (428)
Q Consensus 124 ~eA~~~~~~al~l~p~~~~a~~~lg~~~~~----lg~~~eA~~~~~~al~l~P~~~~~------------~~~l~~a~~~ 187 (428)
++|+.+|.+++ +.++.+++++|.+|.. ..++++|+.+|+++.......... ..++.+|..+
T Consensus 304 ~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~ 380 (452)
T 3e4b_A 304 KAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVF 380 (452)
T ss_dssp HHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCTTHHHHHHHHHHSCTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChHHHHHHHHHHHHhCCCCCCCHHHHHHH
Confidence 99999999999 9999999999999887 349999999999998764333222 1245677778
Q ss_pred HHHHHHhch
Q 014256 188 YEKEVFQKA 196 (428)
Q Consensus 188 ~~~a~~~~~ 196 (428)
|.++.....
T Consensus 381 ~~~A~~~g~ 389 (452)
T 3e4b_A 381 SQLAKAQDT 389 (452)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHHCCC
Confidence 887776553
No 199
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.59 E-value=3.5e-07 Score=89.07 Aligned_cols=121 Identities=12% Similarity=0.082 Sum_probs=80.2
Q ss_pred CCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcC-------HHHHHH-HHHH--HHccCCc-HHHHHHHHHHHHHh
Q 014256 52 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK-------FKEAID-CYSR--SIALSPT-AVAYANRAMAYLKL 120 (428)
Q Consensus 52 g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~-------~~~Ai~-~y~~--al~~~p~-~~~~~nla~~~~~~ 120 (428)
..+.+|+.+|+++++.+|++..+.+ .++.+|+.... ...++. .+.. ++..+|. +.+|..+|..++..
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~A~A--~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~ 290 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTYARA--EKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVK 290 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHH--HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHH--HHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhC
Confidence 3456788888888888888777644 44544432111 111111 1221 2233455 77777777777777
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcH
Q 014256 121 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 175 (428)
Q Consensus 121 ~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~ 175 (428)
|++++|+..+++|+.++|+ ..+|..+|.++...|++++|+..|.++++++|...
T Consensus 291 gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 291 GKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 8888888888888888764 56777788888888888888888888888888764
No 200
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.57 E-value=3.6e-07 Score=101.64 Aligned_cols=95 Identities=20% Similarity=0.265 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC------------------
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDD------------------ 138 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p------------------ 138 (428)
+..+|..++..|+|++|+.+|.++ ..|..+|.+|.++|+|++|++.+.+|...++
T Consensus 1198 ~~~iGd~le~eg~YeeA~~~Y~kA-------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~ 1270 (1630)
T 1xi4_A 1198 IQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQ 1270 (1630)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhh-------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHH
Confidence 445666666666666666666664 3566667777777777777777766633322
Q ss_pred -------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH
Q 014256 139 -------RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 178 (428)
Q Consensus 139 -------~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~ 178 (428)
.++..+..++..|...|.|++|+..+++++.++|.+....
T Consensus 1271 ~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmf 1317 (1630)
T 1xi4_A 1271 MCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMF 1317 (1630)
T ss_pred HHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHH
Confidence 1223334445555666666666666666666666555443
No 201
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.57 E-value=6e-07 Score=71.50 Aligned_cols=72 Identities=13% Similarity=0.056 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccC-------Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALS-------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRA 148 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~-------p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg 148 (428)
.+.+|..++..|+|..|+.+|+.++... +. ..++.++|.||.++|+++.|+..+++++.++|++..+..+++
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 5667777777777777777777776642 11 445555566666666666666666666666665555555554
No 202
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.55 E-value=4.9e-07 Score=70.72 Aligned_cols=71 Identities=21% Similarity=0.123 Sum_probs=63.7
Q ss_pred CCc-HHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCc
Q 014256 104 SPT-AVAYANRAMAYLKLRR---FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 104 ~p~-~~~~~nla~~~~~~~~---~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~ 174 (428)
+|+ +..+..+|.+++..++ .++|...+.+++.+||+++.+++.+|..++..|+|++|+..|++++..+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 455 8888999999876665 7999999999999999999999999999999999999999999999999884
No 203
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.54 E-value=1.1e-06 Score=69.99 Aligned_cols=78 Identities=15% Similarity=0.065 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHH
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEALNLD-------DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK 179 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al~l~-------p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~ 179 (428)
+.-.+.+|..++..++|..|+.++..|+... +..+.++..+|.++..+|+++.|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4456889999999999999999999999863 346789999999999999999999999999999999999877
Q ss_pred HHHHH
Q 014256 180 QLAEV 184 (428)
Q Consensus 180 ~l~~a 184 (428)
++.-.
T Consensus 85 n~~~~ 89 (104)
T 2v5f_A 85 NLKYF 89 (104)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 76533
No 204
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.54 E-value=4.3e-07 Score=91.34 Aligned_cols=97 Identities=8% Similarity=-0.034 Sum_probs=81.2
Q ss_pred HHHHHhcCHHHHHHHHHHHHcc-----CCc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHH
Q 014256 82 NECFKQKKFKEAIDCYSRSIAL-----SPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDRY---IKAY 144 (428)
Q Consensus 82 ~~~~~~g~~~~Ai~~y~~al~~-----~p~----~~~~~nla~~~~~~~~~~eA~~~~~~al~l-----~p~~---~~a~ 144 (428)
......|+|++|+..|++++++ .|+ ...+.|+|.+|..+|+|++|+..|.+++.+ .|++ ...+
T Consensus 306 ~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l 385 (433)
T 3qww_A 306 RRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMW 385 (433)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 3334468999999999999985 333 678999999999999999999999999965 3444 5679
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhC-----CCcHHHH
Q 014256 145 SRRATARKELGKLKESIEDSEFALRLE-----PQNQEIK 178 (428)
Q Consensus 145 ~~lg~~~~~lg~~~eA~~~~~~al~l~-----P~~~~~~ 178 (428)
+++|.+|..+|+|++|+..|++++.+. |+++...
T Consensus 386 ~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 386 LKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 999999999999999999999999764 6776654
No 205
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.54 E-value=7.9e-07 Score=89.34 Aligned_cols=101 Identities=11% Similarity=0.046 Sum_probs=84.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHccC-----Cc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---
Q 014256 78 KELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDRY--- 140 (428)
Q Consensus 78 ~~lg~~~~~~g~~~~Ai~~y~~al~~~-----p~----~~~~~nla~~~~~~~~~~eA~~~~~~al~l-----~p~~--- 140 (428)
......+..+|+|++|+..|++++++. |+ ...+.|+|.+|..+|+|++|+..|.+++.+ .|++
T Consensus 291 l~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~ 370 (429)
T 3qwp_A 291 LKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVR 370 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHH
Confidence 344455778899999999999999762 33 678999999999999999999999999965 3444
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCcHHHH
Q 014256 141 IKAYSRRATARKELGKLKESIEDSEFALRL-----EPQNQEIK 178 (428)
Q Consensus 141 ~~a~~~lg~~~~~lg~~~eA~~~~~~al~l-----~P~~~~~~ 178 (428)
...++++|.+|..+|+|++|+..|++++.+ -|+++...
T Consensus 371 a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 413 (429)
T 3qwp_A 371 GVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIE 413 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 567999999999999999999999999975 47776654
No 206
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.53 E-value=6.2e-07 Score=89.57 Aligned_cols=131 Identities=13% Similarity=0.077 Sum_probs=98.6
Q ss_pred hhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHH
Q 014256 40 SAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYL 118 (428)
Q Consensus 40 ~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~ 118 (428)
.++..+|..| ..|.|++|+.+|.++ + . |..+|.++++.|+|++|+++|.++ .++.+|...+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a----~----n--~~~LA~~L~~Lg~yq~AVea~~KA----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV----S----N--FGRLASTLVHLGEYQAAVDGARKA----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT----T----C--HHHHHHHHHTTTCHHHHHHHHHHH----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh----h----h--HHHHHHHHHHhccHHHHHHHHHHc----CCchhHHHHHHHHH
Confidence 3778888888 999999999999987 1 2 779999999999999999999999 24788999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014256 119 KLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLY 188 (428)
Q Consensus 119 ~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~ 188 (428)
..|+|+.|..+... +..+|++ ...+...|...|++++|+..+++++.+++.+..+...+..+...|
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 99999999776554 4455554 446888999999999999999999999999988877776554443
No 207
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.52 E-value=3.3e-08 Score=98.74 Aligned_cols=144 Identities=11% Similarity=0.148 Sum_probs=62.4
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchH--------------------------HHHHHHHHHHHHhcCHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDA--------------------------TSEKELGNECFKQKKFKEA 93 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a--------------------------~~~~~lg~~~~~~g~~~~A 93 (428)
.+..++.++ ..|++++|+.++..+.+..++ +.. ..|..+|..|+..|+|++|
T Consensus 63 ~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~-~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~yeeA 141 (449)
T 1b89_A 63 SYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAA 141 (449)
T ss_dssp -----------------------------------------------CHHHHTTTTTCC----------------CTTTH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhCcc-chhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHHHH
Confidence 444444444 667777777777776654211 111 1256666666667777777
Q ss_pred HHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 014256 94 IDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 173 (428)
Q Consensus 94 i~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~ 173 (428)
+.+|.++ ..|..+|.|+.++|+|++|++.+.++ .++.+|...+.++...|+++.|...... +.++|+
T Consensus 142 ~~~Y~~a-------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad 208 (449)
T 1b89_A 142 KLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHAD 208 (449)
T ss_dssp HHHHHHT-------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHH
T ss_pred HHHHHHh-------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHh
Confidence 7776654 24666677777777777777777776 3566677777777777777777555543 224444
Q ss_pred cHHH-------HHHHHHHHHHHHHHHHhchhh
Q 014256 174 NQEI-------KKQLAEVKSLYEKEVFQKASK 198 (428)
Q Consensus 174 ~~~~-------~~~l~~a~~~~~~a~~~~~~~ 198 (428)
+... .+.+.+|+.++++++.+++.+
T Consensus 209 ~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 209 ELEELINYYQDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC
T ss_pred hHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH
Confidence 3222 356777888888887777554
No 208
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.51 E-value=1.2e-06 Score=85.34 Aligned_cols=138 Identities=14% Similarity=0.066 Sum_probs=108.3
Q ss_pred hhhhcCCCCchHHHHHHHHHHHHHhc---CHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHH-------HHH-HHH
Q 014256 63 SSLMNEESTPDATSEKELGNECFKQK---KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQ-------EAE-DDC 130 (428)
Q Consensus 63 ~al~~~p~~~~a~~~~~lg~~~~~~g---~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~-------eA~-~~~ 130 (428)
++....|.+..++.++.+|..++..+ ++.+|+.+|+++++++|+ +.+|..++.||.....+. .++ ..+
T Consensus 185 r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~ 264 (372)
T 3ly7_A 185 TLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEI 264 (372)
T ss_dssp HHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHH
Confidence 34445677788888899999888764 468999999999999999 888888888886432211 111 112
Q ss_pred H--HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHH---------HHHHHHHHHHHHHHHHHhchhhh
Q 014256 131 T--EALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE---------IKKQLAEVKSLYEKEVFQKASKT 199 (428)
Q Consensus 131 ~--~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~---------~~~~l~~a~~~~~~a~~~~~~~~ 199 (428)
. .++..+|.++.++..+|.++...|++++|+..+++++.++|+... ..++.++|...|.+++.++|...
T Consensus 265 ~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 265 DNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 2 234678999999999999999999999999999999999987432 14678899999999999999875
Q ss_pred H
Q 014256 200 L 200 (428)
Q Consensus 200 ~ 200 (428)
.
T Consensus 345 t 345 (372)
T 3ly7_A 345 T 345 (372)
T ss_dssp H
T ss_pred h
Confidence 4
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.49 E-value=8.9e-07 Score=75.32 Aligned_cols=98 Identities=9% Similarity=0.009 Sum_probs=84.0
Q ss_pred CCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhc---CHHHHHHHHHHHHccC-C-c-HHHHHHHHHHHHHhcCHHH
Q 014256 52 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK---KFKEAIDCYSRSIALS-P-T-AVAYANRAMAYLKLRRFQE 125 (428)
Q Consensus 52 g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g---~~~~Ai~~y~~al~~~-p-~-~~~~~nla~~~~~~~~~~e 125 (428)
.....+...|.+.+..++...++ .+++|+++.+.+ ++.+++..++.++..+ | . ..+++++|..|+++|+|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~--~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKST--QFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHH--HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 34456788888888877765555 789999999987 7889999999999999 7 3 7899999999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014256 126 AEDDCTEALNLDDRYIKAYSRRATAR 151 (428)
Q Consensus 126 A~~~~~~al~l~p~~~~a~~~lg~~~ 151 (428)
|..+|+++++++|+|..+...+..+.
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999988876655444
No 210
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.47 E-value=4.5e-07 Score=100.87 Aligned_cols=119 Identities=6% Similarity=-0.019 Sum_probs=67.1
Q ss_pred cChhhhhcCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHH
Q 014256 36 SSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRA 114 (428)
Q Consensus 36 ~~~~~a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla 114 (428)
-+...+...+|.++ ..|++.+|+..|.++ ++..+ +.+.|.++.+.|+|++|+++|..+++..+.+.+...+|
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~sa--y~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~La 1174 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSS--YMEVVQAANTSGNWEELVKYLQMARKKARESYVETELI 1174 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHH--HHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHH
Confidence 34445556666666 777777777777665 33334 66777777777777777777777766554322222344
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014256 115 MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 167 (428)
Q Consensus 115 ~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a 167 (428)
.+|.+++++++ ++.|- ...+...+.++|..+...|+|++|...|.++
T Consensus 1175 faYAKl~rlee-le~fI-----~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1175 FALAKTNRLAE-LEEFI-----NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHhhcCHHH-HHHHH-----hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 44444444442 22221 1223334455566666666666666655554
No 211
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.35 E-value=8.1e-07 Score=89.28 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=79.1
Q ss_pred cCCCCcchHHHHHhhhhc-----CCCCc-hHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc--------CCc-HHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMN-----EESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIAL--------SPT-AVAYANRA 114 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~-----~p~~~-~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~--------~p~-~~~~~nla 114 (428)
..|+|++|+..|+++|.+ .|+++ .+..+.++|.+|..+|+|++|+.+|++++.+ +|+ +..++|+|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 468899999999999886 34443 3556889999999999999999999999986 233 67899999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CCCCHHH
Q 014256 115 MAYLKLRRFQEAEDDCTEALNL-----DDRYIKA 143 (428)
Q Consensus 115 ~~~~~~~~~~eA~~~~~~al~l-----~p~~~~a 143 (428)
.+|..+|+|++|+..|.+|+.+ .|+++..
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999999999999975 4666644
No 212
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.33 E-value=1.1e-06 Score=88.27 Aligned_cols=112 Identities=10% Similarity=0.032 Sum_probs=87.9
Q ss_pred cCCCccccCCCCcchHHHHHhhhhcC-----CCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc--------CCc-H
Q 014256 43 KPSPSGNSYSRNYDPVSHISSSLMNE-----EST-PDATSEKELGNECFKQKKFKEAIDCYSRSIAL--------SPT-A 107 (428)
Q Consensus 43 ~~~~~~y~~g~~~~Ai~~~~~al~~~-----p~~-~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~--------~p~-~ 107 (428)
..+...+..|+|++|+..|++++.+. |++ ..+..+.++|.+|..+|+|++|+.+|.+++.+ +|. +
T Consensus 292 ~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a 371 (429)
T 3qwp_A 292 KKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRG 371 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHH
Confidence 33444457899999999999999863 333 24556889999999999999999999999976 233 6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCCHH---HHHHHHHHHHHc
Q 014256 108 VAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDRYIK---AYSRRATARKEL 154 (428)
Q Consensus 108 ~~~~nla~~~~~~~~~~eA~~~~~~al~l-----~p~~~~---a~~~lg~~~~~l 154 (428)
..++|+|.+|..+|+|++|+..+.+|+.+ .|+++. ++.+++.++..+
T Consensus 372 ~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 372 VQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 77999999999999999999999999975 466654 455566665443
No 213
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.23 E-value=5.6e-06 Score=64.60 Aligned_cols=71 Identities=21% Similarity=0.135 Sum_probs=62.6
Q ss_pred CCCCchHHHHHHHHHHHHHhcC---HHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 014256 68 EESTPDATSEKELGNECFKQKK---FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY 140 (428)
Q Consensus 68 ~p~~~~a~~~~~lg~~~~~~g~---~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~ 140 (428)
+|.++.. +..+|.+++..++ ..+|...+.+++.++|+ ..+++.+|..++..|+|++|+..+++++..+|..
T Consensus 2 ~p~~~~~--~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQ--LAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHH--HHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHH--HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4566555 7799999986666 79999999999999999 8999999999999999999999999999999984
No 214
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.17 E-value=2.1e-05 Score=73.81 Aligned_cols=108 Identities=13% Similarity=0.018 Sum_probs=90.4
Q ss_pred cCCCCchHHHHHHHHHHHH-H--hc------CHHHHHHHHHHHHccCCc---HHHHHHHHHHHHHh-----cCHHHHHHH
Q 014256 67 NEESTPDATSEKELGNECF-K--QK------KFKEAIDCYSRSIALSPT---AVAYANRAMAYLKL-----RRFQEAEDD 129 (428)
Q Consensus 67 ~~p~~~~a~~~~~lg~~~~-~--~g------~~~~Ai~~y~~al~~~p~---~~~~~nla~~~~~~-----~~~~eA~~~ 129 (428)
.+|.+.++..|...+..-. . .| ....|...++++++++|+ ..+|..+|..|.+. |+.+.|...
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 3556666666666665443 2 13 367899999999999999 56899999999996 999999999
Q ss_pred HHHHHhcCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCc
Q 014256 130 CTEALNLDDRY-IKAYSRRATARKE-LGKLKESIEDSEFALRLEPQN 174 (428)
Q Consensus 130 ~~~al~l~p~~-~~a~~~lg~~~~~-lg~~~eA~~~~~~al~l~P~~ 174 (428)
|++|+.++|+. ..+++..|..+.. .|++++|...+++++...|..
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999975 9999999999988 499999999999999988763
No 215
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.15 E-value=3.8e-05 Score=62.93 Aligned_cols=98 Identities=13% Similarity=0.031 Sum_probs=79.9
Q ss_pred hcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHH---HHHHHHHHHhcC-C-CCHHHHHHHHHHHHHcCCHHHH
Q 014256 87 QKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQE---AEDDCTEALNLD-D-RYIKAYSRRATARKELGKLKES 160 (428)
Q Consensus 87 ~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~e---A~~~~~~al~l~-p-~~~~a~~~lg~~~~~lg~~~eA 160 (428)
......+...|.+.+..++. ..+.+++|.++.+...... ++..++..+..+ | ..-..+|.+|..++++|+|.+|
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A 93 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHH
Confidence 34455667777777775544 8899999999999887666 999999998887 5 5678999999999999999999
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 161 IEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 161 ~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
+.+++.+|+++|+|.++......+
T Consensus 94 ~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999999999886544333
No 216
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.14 E-value=1.1e-05 Score=67.57 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=80.8
Q ss_pred CCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHH
Q 014256 45 SPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK 119 (428)
Q Consensus 45 ~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~----~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~ 119 (428)
++..| ..+..++|+.+|+++.... +..+ ++++|.+|.. .+++++|+.+|+++.+.. ++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g--~~~a--~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g-~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN--SGNG--CRFLGDFYENGKYVKKDLRKAAQYYSKACGLN-DQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT--CHHH--HHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC--CHHH--HHHHHHHHHcCCCCCccHHHHHHHHHHHHcCC-CHHHHHHHHHHHHC
Confidence 66777 5566778999999999874 4455 7899999999 899999999999999873 38899999999999
Q ss_pred ----hcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 014256 120 ----LRRFQEAEDDCTEALNLDDRYIKAYSRRA 148 (428)
Q Consensus 120 ----~~~~~eA~~~~~~al~l~p~~~~a~~~lg 148 (428)
.+++++|+.+|++|.+.. ++.+..+++
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred CCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 899999999999999874 455655554
No 217
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.97 E-value=7.2e-05 Score=79.29 Aligned_cols=145 Identities=13% Similarity=0.088 Sum_probs=94.4
Q ss_pred cCCCCcchH-HHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC-----------C-----------c
Q 014256 50 SYSRNYDPV-SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS-----------P-----------T 106 (428)
Q Consensus 50 ~~g~~~~Ai-~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~-----------p-----------~ 106 (428)
..|+.++|. ..|.+++...|..... |..++......|+++.|...|++++..- | .
T Consensus 355 ~~~~~~~a~r~il~rAi~~~P~s~~L--wl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~ 432 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQCIPNSAVL--AFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSK 432 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccc
Confidence 456666775 7777777777765433 5566777777777777777777777641 3 1
Q ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCcHHHH-----
Q 014256 107 -AVAYANRAMAYLKLRRFQEAEDDCTEALNL-DDRYIKAYSRRATARKELGK-LKESIEDSEFALRLEPQNQEIK----- 178 (428)
Q Consensus 107 -~~~~~nla~~~~~~~~~~eA~~~~~~al~l-~p~~~~a~~~lg~~~~~lg~-~~eA~~~~~~al~l~P~~~~~~----- 178 (428)
..+|...+......|..+.|...|.+|+.. .+.....|...|......|+ ++.|...|+.+++..|+++..+
T Consensus 433 ~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~ 512 (679)
T 4e6h_A 433 LTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLD 512 (679)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 235666666666677777777777777766 43445566666666555544 7777777777777777766552
Q ss_pred -----HHHHHHHHHHHHHHHhch
Q 014256 179 -----KQLAEVKSLYEKEVFQKA 196 (428)
Q Consensus 179 -----~~l~~a~~~~~~a~~~~~ 196 (428)
+....|..+|++++...+
T Consensus 513 fe~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 513 FLIYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHHHTCHHHHHHHHHHHTTTSS
T ss_pred HHHhCCCHHHHHHHHHHHHHhcC
Confidence 234566667777766554
No 218
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.83 E-value=0.00015 Score=59.47 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=78.6
Q ss_pred cchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHH---HHHHHHHHHccC-Cc--HHHHHHHHHHHHHhcCHHHHHH
Q 014256 55 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKE---AIDCYSRSIALS-PT--AVAYANRAMAYLKLRRFQEAED 128 (428)
Q Consensus 55 ~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~---Ai~~y~~al~~~-p~--~~~~~nla~~~~~~~~~~eA~~ 128 (428)
..+...|.+.+..++....+ .+++|+++.+..+..+ +|.++...+..+ |. -...+.+|..++++|+|..|..
T Consensus 18 ~~~~~~y~~e~~~~~~s~~~--~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~ 95 (126)
T 1nzn_A 18 LKFEKKFQSEKAAGSVSKST--QFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALK 95 (126)
T ss_dssp HHHHHHHHHHHHHSCCCHHH--HHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhccCCCcHHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHH
Confidence 34667788877766554445 7799999999877666 999999999987 63 6788999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHH
Q 014256 129 DCTEALNLDDRYIKAYSRRATAR 151 (428)
Q Consensus 129 ~~~~al~l~p~~~~a~~~lg~~~ 151 (428)
.++.+++.+|+|..|......+.
T Consensus 96 ~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 96 YVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999988876665544
No 219
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.81 E-value=8.2e-05 Score=78.82 Aligned_cols=142 Identities=13% Similarity=-0.006 Sum_probs=117.4
Q ss_pred hHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHH-HHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 014256 57 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAI-DCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEAL 134 (428)
Q Consensus 57 Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai-~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al 134 (428)
....|++++...|.++.. |...+..+...|+.++|+ ..|.+|+...|. ..+|...+......|+++.|...|++++
T Consensus 328 v~~~Ye~aL~~~p~~~~l--W~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 328 MTYVYMQAAQHVCFAPEI--WFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHHHTTTCHHH--HHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHH--HHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 457899999999998777 889999999999999997 999999999998 8889999999999999999999999999
Q ss_pred hcC-----------CC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCcHHHH-----------HH
Q 014256 135 NLD-----------DR-----------YIKAYSRRATARKELGKLKESIEDSEFALRL-EPQNQEIK-----------KQ 180 (428)
Q Consensus 135 ~l~-----------p~-----------~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l-~P~~~~~~-----------~~ 180 (428)
..- |. ...+|...+....+.|..+.|...|.+|++. .+....+. ++
T Consensus 406 ~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d 485 (679)
T 4e6h_A 406 DRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKD 485 (679)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCC
Confidence 752 43 4567888898888999999999999999987 32222221 12
Q ss_pred HHHHHHHHHHHHHhchhhhH
Q 014256 181 LAEVKSLYEKEVFQKASKTL 200 (428)
Q Consensus 181 l~~a~~~~~~a~~~~~~~~~ 200 (428)
.+.|...|+.++..-|..+.
T Consensus 486 ~e~Ar~ife~~Lk~~p~~~~ 505 (679)
T 4e6h_A 486 TKTACKVLELGLKYFATDGE 505 (679)
T ss_dssp CHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHCCCchH
Confidence 56888888988887765543
No 220
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.74 E-value=5.9e-05 Score=70.76 Aligned_cols=90 Identities=11% Similarity=-0.037 Sum_probs=79.5
Q ss_pred CCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh-----cCHHHHHHHHHHHHccCCc--HHHHHHHHHHHHH-hcC
Q 014256 51 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-----KKFKEAIDCYSRSIALSPT--AVAYANRAMAYLK-LRR 122 (428)
Q Consensus 51 ~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~-----g~~~~Ai~~y~~al~~~p~--~~~~~nla~~~~~-~~~ 122 (428)
.+....|...++++++++|+.....++.-+|..|.+. |+.++|..+|+++++++|+ ...++..|..+.. +|+
T Consensus 176 l~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd 255 (301)
T 3u64_A 176 PDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNN 255 (301)
T ss_dssp HHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTC
T ss_pred HHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCC
Confidence 3445678999999999999976655688999999994 9999999999999999995 7888899999988 499
Q ss_pred HHHHHHHHHHHHhcCCCC
Q 014256 123 FQEAEDDCTEALNLDDRY 140 (428)
Q Consensus 123 ~~eA~~~~~~al~l~p~~ 140 (428)
+++|...+++++..+|..
T Consensus 256 ~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 256 RAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHHcCCCCC
Confidence 999999999999998873
No 221
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.64 E-value=0.00067 Score=55.77 Aligned_cols=78 Identities=12% Similarity=0.010 Sum_probs=62.1
Q ss_pred CcHHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHH
Q 014256 105 PTAVAYANRAMAYLKLRR---FQEAEDDCTEALNLDDR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQ 180 (428)
Q Consensus 105 p~~~~~~nla~~~~~~~~---~~eA~~~~~~al~l~p~-~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~ 180 (428)
|.+.+-+++|.++.+... ..+++..++..++.+|. ....+|.+|..++++|+|++|..+.+.+|+++|+|.++...
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 447788888888888764 45788888888888874 46788889999999999999999999999999998887644
Q ss_pred HH
Q 014256 181 LA 182 (428)
Q Consensus 181 l~ 182 (428)
..
T Consensus 118 k~ 119 (134)
T 3o48_A 118 KS 119 (134)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 222
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.60 E-value=0.0012 Score=54.93 Aligned_cols=78 Identities=12% Similarity=0.011 Sum_probs=65.9
Q ss_pred CCcHHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHH
Q 014256 104 SPTAVAYANRAMAYLKLRR---FQEAEDDCTEALNLDDR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK 179 (428)
Q Consensus 104 ~p~~~~~~nla~~~~~~~~---~~eA~~~~~~al~l~p~-~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~ 179 (428)
.|...+.+++|.++.+... -.+++..++..+..+|. .-..+|.+|..++++|+|.+|..+.+.+|+++|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 3558888899999888764 45788899999988884 5678999999999999999999999999999999988764
Q ss_pred HH
Q 014256 180 QL 181 (428)
Q Consensus 180 ~l 181 (428)
..
T Consensus 116 Lk 117 (144)
T 1y8m_A 116 LK 117 (144)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 223
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.34 E-value=0.0023 Score=52.62 Aligned_cols=82 Identities=7% Similarity=0.018 Sum_probs=69.1
Q ss_pred CchHHHHHHHHHHHHHhcC---HHHHHHHHHHHHccCCc--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Q 014256 71 TPDATSEKELGNECFKQKK---FKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 145 (428)
Q Consensus 71 ~~~a~~~~~lg~~~~~~g~---~~~Ai~~y~~al~~~p~--~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~ 145 (428)
.+.....+++|+++.+..+ ...+|..+...+..+|. -..++.+|..++++|+|+.|..+++.+++..|+|..|..
T Consensus 37 ~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp GSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred CCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 3345558899999998764 56799999999998885 778999999999999999999999999999999988876
Q ss_pred HHHHHHH
Q 014256 146 RRATARK 152 (428)
Q Consensus 146 ~lg~~~~ 152 (428)
....+..
T Consensus 117 Lk~~Ie~ 123 (134)
T 3o48_A 117 LKSMVED 123 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 224
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.33 E-value=0.0032 Score=52.85 Aligned_cols=108 Identities=18% Similarity=0.043 Sum_probs=91.6
Q ss_pred cCCCCchHHHHHHHHHHHHHhcCH------HHHHHHHHHHHccCCc---------HHHHHHHHHHHHHhcCHHHHHHHHH
Q 014256 67 NEESTPDATSEKELGNECFKQKKF------KEAIDCYSRSIALSPT---------AVAYANRAMAYLKLRRFQEAEDDCT 131 (428)
Q Consensus 67 ~~p~~~~a~~~~~lg~~~~~~g~~------~~Ai~~y~~al~~~p~---------~~~~~nla~~~~~~~~~~eA~~~~~ 131 (428)
..|++++. |......+.+.|+. ++-++.|++|+..-|- ...|.+.|.. ...++.++|.+.|.
T Consensus 8 ~~p~~yd~--W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~ 84 (161)
T 4h7y_A 8 MMANNPED--WLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQ 84 (161)
T ss_dssp --CCSHHH--HHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHH
T ss_pred eCCCCHHH--HHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHH
Confidence 46777777 77888888888998 8899999999987653 4567777755 67799999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 132 EALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 132 ~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
.|+.+....+++|...|.-..+.|+...|...+.+++.+.|...+.
T Consensus 85 ~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 85 MARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 9999988899999999999999999999999999999999987654
No 225
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.22 E-value=0.0059 Score=50.79 Aligned_cols=80 Identities=6% Similarity=0.005 Sum_probs=67.8
Q ss_pred chHHHHHHHHHHHHHhcC---HHHHHHHHHHHHccCCc--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Q 014256 72 PDATSEKELGNECFKQKK---FKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 146 (428)
Q Consensus 72 ~~a~~~~~lg~~~~~~g~---~~~Ai~~y~~al~~~p~--~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~ 146 (428)
......+++|+++.+..+ ..+++.+++..+...|. -...+.+|..++++|+|.+|..+++.+++.+|+|..+...
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 345558899999999764 55899999999998885 7788999999999999999999999999999999887665
Q ss_pred HHHHH
Q 014256 147 RATAR 151 (428)
Q Consensus 147 lg~~~ 151 (428)
...+.
T Consensus 117 k~~Ie 121 (144)
T 1y8m_A 117 KSMVE 121 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 226
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.00 E-value=0.0044 Score=52.95 Aligned_cols=90 Identities=16% Similarity=0.031 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccC---Cc-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---------
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALS---PT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLD--------- 137 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~---p~-------~~~~~nla~~~~~~~~~~eA~~~~~~al~l~--------- 137 (428)
+.+-...++..|.|+.|+-.+..++.+. |+ ..++..+|.+++..++|..|...|.+|+.+.
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~ 102 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKV 102 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 4445555556666666666655544432 21 2345556666666666666666666654321
Q ss_pred ----------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 014256 138 ----------------DRYIKAYSRRATARKELGKLKESIEDSEF 166 (428)
Q Consensus 138 ----------------p~~~~a~~~lg~~~~~lg~~~eA~~~~~~ 166 (428)
+.+....|+.+.|+..+|++++|+..++.
T Consensus 103 ~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 103 RPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred cccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 22347889999999999999999998765
No 227
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.97 E-value=0.01 Score=60.38 Aligned_cols=118 Identities=9% Similarity=-0.113 Sum_probs=83.3
Q ss_pred chHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHH-------------------
Q 014256 56 DPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAM------------------- 115 (428)
Q Consensus 56 ~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~------------------- 115 (428)
.....|++++...|..... |...+..+...|+.+.|...|.+|+.. |. ...|...+.
T Consensus 197 Rv~~~ye~al~~~p~~~~l--W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~ 273 (493)
T 2uy1_A 197 RMHFIHNYILDSFYYAEEV--YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGE 273 (493)
T ss_dssp HHHHHHHHHHHHTTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHcCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhc
Confidence 3567999999999887665 889999999999999999999999999 87 333332222
Q ss_pred ---------------------HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCC
Q 014256 116 ---------------------AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-KLKESIEDSEFALRLEPQ 173 (428)
Q Consensus 116 ---------------------~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg-~~~eA~~~~~~al~l~P~ 173 (428)
.....+..+.|...|.+| ...+.....|...|......| +.+.|...|+.+++..|+
T Consensus 274 ~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 274 AESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred cchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 222355677777777777 333334556666666555555 477788888888877777
Q ss_pred cHHH
Q 014256 174 NQEI 177 (428)
Q Consensus 174 ~~~~ 177 (428)
.+..
T Consensus 353 ~~~~ 356 (493)
T 2uy1_A 353 STLL 356 (493)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 6654
No 228
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.88 E-value=0.019 Score=58.40 Aligned_cols=141 Identities=12% Similarity=0.110 Sum_probs=99.0
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHh---------cCHHHHHHHHHHHHcc--CCcHHHHHHHHHHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ---------KKFKEAIDCYSRSIAL--SPTAVAYANRAMAYL 118 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~---------g~~~~Ai~~y~~al~~--~p~~~~~~nla~~~~ 118 (428)
+.|++++|+..|++.....- .+....|..+-.+|... +..+.|...|.+.... .|+..+|+.+-.+|.
T Consensus 38 k~G~~~~A~~lf~~M~~~Gv-~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~ 116 (501)
T 4g26_A 38 KKGDVLEALRLYDEARRNGV-QLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV 116 (501)
T ss_dssp TSCCHHHHHHHHHHHHHHTC-CCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcCC-CCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 77999999999988876531 12233355555555443 3478888888887664 467888888888888
Q ss_pred HhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCcHHH---------HHHHHHHHH
Q 014256 119 KLRRFQEAEDDCTEALNLD-DRYIKAYSRRATARKELGKLKESIEDSEFALR--LEPQNQEI---------KKQLAEVKS 186 (428)
Q Consensus 119 ~~~~~~eA~~~~~~al~l~-p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~--l~P~~~~~---------~~~l~~a~~ 186 (428)
+.|++++|...+.+..... .-+...|..+-.++...|++++|...|..... +.|+.... .+++++|.+
T Consensus 117 ~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ 196 (501)
T 4g26_A 117 AKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYK 196 (501)
T ss_dssp HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHH
Confidence 9999999999888877653 22566777777888888999999988888775 34554332 345666777
Q ss_pred HHHHH
Q 014256 187 LYEKE 191 (428)
Q Consensus 187 ~~~~a 191 (428)
++++-
T Consensus 197 ll~~M 201 (501)
T 4g26_A 197 TLQRL 201 (501)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 229
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.62 E-value=0.03 Score=57.01 Aligned_cols=123 Identities=6% Similarity=-0.000 Sum_probs=99.6
Q ss_pred CCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc--CCcHHHHHHHHHHHHHhcCHHHHHH
Q 014256 51 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--SPTAVAYANRAMAYLKLRRFQEAED 128 (428)
Q Consensus 51 ~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~--~p~~~~~~nla~~~~~~~~~~eA~~ 128 (428)
.+..+.|...|.+.....- .+....+..+-..|.+.|++++|...|.+.... .|+...|..+-.+|.+.|++++|.+
T Consensus 83 ~~~l~~A~~lf~~M~~~G~-~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~ 161 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKV-VPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYE 161 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cchHHHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHH
Confidence 3456778889988766531 224455788999999999999999999998765 4778889999999999999999999
Q ss_pred HHHHHHhcCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCc
Q 014256 129 DCTEALNLDD-RYIKAYSRRATARKELGKLKESIEDSEFALR--LEPQN 174 (428)
Q Consensus 129 ~~~~al~l~p-~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~--l~P~~ 174 (428)
.+.+.....- -+...|..+-.++.+.|++++|...|++.-. ..|+.
T Consensus 162 l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~ 210 (501)
T 4g26_A 162 VDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 210 (501)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCH
Confidence 9999886542 3567788888999999999999999998765 34543
No 230
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.59 E-value=0.0013 Score=56.36 Aligned_cols=108 Identities=13% Similarity=0.018 Sum_probs=77.8
Q ss_pred cCCCccccCCCCcchHHHHHhhhhcCCCCc-------hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCC---c------
Q 014256 43 KPSPSGNSYSRNYDPVSHISSSLMNEESTP-------DATSEKELGNECFKQKKFKEAIDCYSRSIALSP---T------ 106 (428)
Q Consensus 43 ~~~~~~y~~g~~~~Ai~~~~~al~~~p~~~-------~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p---~------ 106 (428)
..+...+..+.|+.|+.....++....++. .+..+..+|+.+|..|+|..|...|.+++.... .
T Consensus 25 dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~ 104 (167)
T 3ffl_A 25 DHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRP 104 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 444455678899999988888666532222 234577899999999999999999999876421 1
Q ss_pred -----------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 014256 107 -----------------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 151 (428)
Q Consensus 107 -----------------~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~ 151 (428)
..+.+.+|.||.+++++++|+..++.. -..-..++....+|..|
T Consensus 105 ~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 105 STGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 257788999999999999999986642 12224566666666554
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.37 E-value=0.011 Score=62.80 Aligned_cols=114 Identities=6% Similarity=-0.054 Sum_probs=81.4
Q ss_pred CCC-CcchHHHHHhhhhcCCCCchHHHHHHHHHHH--HH-hcCHHHHHHHHHHHHcc--------CCc-----------H
Q 014256 51 YSR-NYDPVSHISSSLMNEESTPDATSEKELGNEC--FK-QKKFKEAIDCYSRSIAL--------SPT-----------A 107 (428)
Q Consensus 51 ~g~-~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~--~~-~g~~~~Ai~~y~~al~~--------~p~-----------~ 107 (428)
.++ ++.|+..+++....+|.... ++..+.+. .. ..+--+|+....++++. .+. .
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~---~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 337 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDI---YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMS 337 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHH---HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhH---HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcch
Confidence 344 46689999998888875432 22222221 11 23445677777776631 111 2
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014256 108 VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 167 (428)
Q Consensus 108 ~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a 167 (428)
....-.+..++..|+|+-|+...++|+.+.|.....|+.|+.+|..+|+|+.|+-.++.+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 234445777788999999999999999999999999999999999999999999776664
No 232
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.02 E-value=0.11 Score=52.61 Aligned_cols=115 Identities=4% Similarity=-0.130 Sum_probs=91.2
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHH--------------------------------------HHHHHHHHHHhcCHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATS--------------------------------------EKELGNECFKQKKFK 91 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~--------------------------------------~~~lg~~~~~~g~~~ 91 (428)
..|+.+.|...|++++.. |....... |...+..+.+.|+.+
T Consensus 225 ~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~ 303 (493)
T 2uy1_A 225 GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLE 303 (493)
T ss_dssp HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHH
Confidence 678999999999999999 87643211 222333344577899
Q ss_pred HHHHHHHHHHccCCc--HHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014256 92 EAIDCYSRSIALSPT--AVAYANRAMAYLKLR-RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 167 (428)
Q Consensus 92 ~Ai~~y~~al~~~p~--~~~~~nla~~~~~~~-~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a 167 (428)
.|...|.++ . .|. ...|...|..-...+ +++.|...|+.++...|+.+..+...+.....+|+.+.|...|+++
T Consensus 304 ~AR~i~~~A-~-~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 304 LFRKLFIEL-G-NEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHH-T-TSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHh-h-CCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999 4 343 667777787777666 6999999999999999999988888888888999999999999987
No 233
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.39 E-value=0.29 Score=41.81 Aligned_cols=122 Identities=11% Similarity=0.024 Sum_probs=86.9
Q ss_pred ccccCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHH
Q 014256 47 SGNSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEA 126 (428)
Q Consensus 47 ~~y~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA 126 (428)
.+++-.+|+-++-.-.-.+...| +- ...++..++-.|+|..|+-++.. .......+.-+.||.++++|..|
T Consensus 11 Ks~kY~dYdt~~fLsa~L~~~~~---eY--~lL~~I~LyyngEY~R~Lf~L~~----lNT~Ts~YYk~LCy~klKdYkkA 81 (242)
T 3kae_A 11 KSIRYRDYETAIFLAACLLPCKP---EY--RMLMSIVLYLNGEYTRALFHLHK----LNTCTSKYYESLCYKKKKDYKKA 81 (242)
T ss_dssp HHHHTTCHHHHHHHHHHHC-------CT--HHHHHHHHHHTTCHHHHHHHHHT----CCBHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhhcccccHHHHHHHHHccCCh---HH--HhhhhhhhhhcchHhHHHHHHHh----cchHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666544333333333 22 33678899999999999877532 22266667789999999999999
Q ss_pred HHHHHHHH--hc---------------CCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 127 EDDCTEAL--NL---------------DDRYIK-AYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 127 ~~~~~~al--~l---------------~p~~~~-a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
+...+..+ .+ ||.+-. .+..+|..+...|..++|+.+|.......|-.+.+
T Consensus 82 ~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 82 IKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp HHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 99999998 22 234444 45567999999999999999999999999876554
No 234
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.95 E-value=0.28 Score=47.94 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=73.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCc---H--------------------HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIALSPT---A--------------------VAYANRAMAYLKLRRFQEAEDDCTEALN 135 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~~p~---~--------------------~~~~nla~~~~~~~~~~eA~~~~~~al~ 135 (428)
..|......|+.+.|+..+.+++.+... + .+...++.+++..|++.+|+..+..++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3444445568888888888888887421 0 1223467788899999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 014256 136 LDDRYIKAYSRRATARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 136 l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~ 169 (428)
.+|-+-.+|..+..++...|+..+|+..|+++-+
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888754
No 235
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.42 E-value=0.36 Score=40.44 Aligned_cols=100 Identities=12% Similarity=0.001 Sum_probs=76.2
Q ss_pred cchHHHHHhhhhcCCCCc------hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHH
Q 014256 55 YDPVSHISSSLMNEESTP------DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 127 (428)
Q Consensus 55 ~~Ai~~~~~al~~~p~~~------~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~ 127 (428)
+.-++.|++++..-|... .+..|...+.. ...++.++|.+.|+.++.++.. +.+|...|..-..+|+...|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 677789999988776532 13335555543 5669999999999999998555 999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 014256 128 DDCTEALNLDDRYIKAYSRRATARKELGK 156 (428)
Q Consensus 128 ~~~~~al~l~p~~~~a~~~lg~~~~~lg~ 156 (428)
..+.+|+.+.|..... ...|..-...|+
T Consensus 115 kILg~AiG~~~k~~~~-le~a~~nl~~~~ 142 (161)
T 4h7y_A 115 QLLQKAVERGAVPLEM-LEIALRNLNLQK 142 (161)
T ss_dssp HHHHHHHHTTCBCHHH-HHHHHHHHHTTC
T ss_pred HHHHHHhccCCCcHHH-HHHHHHhhhcCC
Confidence 9999999999886543 334444444443
No 236
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.21 E-value=0.17 Score=53.79 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 133 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~a 133 (428)
+...+..+...|+|+-|+.+..+|+...|. ...|+.++.||..+|+|+.|+-.+..+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 556678888899999999999999999999 999999999999999999999877766
No 237
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.67 E-value=0.16 Score=50.38 Aligned_cols=96 Identities=8% Similarity=-0.095 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCCc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--CCH----HHHHH
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD--RYI----KAYSR 146 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p--~~~----~a~~~ 146 (428)
+..+|..|+..|+++.|+++|.++...... ...+.....+++..++|..+...+.++..+-. .++ .....
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~ 213 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTY 213 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence 679999999999999999999998876432 67888888999999999999999999865522 222 33445
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCC
Q 014256 147 RATARKELGKLKESIEDSEFALRLEP 172 (428)
Q Consensus 147 lg~~~~~lg~~~eA~~~~~~al~l~P 172 (428)
.|.++...++|..|...|..++.-..
T Consensus 214 ~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 214 YGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhChHHHHHHHHHHHhccCC
Confidence 57777888999999999988876543
No 238
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.37 E-value=0.41 Score=48.41 Aligned_cols=77 Identities=12% Similarity=-0.030 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014256 109 AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 185 (428)
Q Consensus 109 ~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~ 185 (428)
....+|........+..|..+|.+|+.+.|++..+|+.+|.+....|+.-+|+-+|.+++......+.+..++....
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 45567888888888999999999999999999999999999999999999999999999987776787777766543
No 239
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.21 E-value=0.49 Score=47.86 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 014256 76 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 153 (428)
Q Consensus 76 ~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~ 153 (428)
++..+|....-...+..|..+|.+|+.+.|+ ...|+.+|.++...|+.-+|+-.|.+++.....++.+.-++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 3567888888889999999999999999999 88999999999999999999999999999998899999999988765
No 240
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.15 E-value=0.45 Score=43.82 Aligned_cols=61 Identities=16% Similarity=0.032 Sum_probs=33.7
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHH
Q 014256 117 YLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 177 (428)
Q Consensus 117 ~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~ 177 (428)
+++.|.+++|+..+...++.+|.|......+-..+.-.|+|+.|..-++.+.+++|.....
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 3444555555555555555555555555555555555555555555555555555554444
No 241
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.80 E-value=0.8 Score=44.81 Aligned_cols=91 Identities=12% Similarity=-0.005 Sum_probs=73.8
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHcc----CCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CCC----HHHH
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIAL----SPT---AVAYANRAMAYLKLRRFQEAEDDCTEALNLD---DRY----IKAY 144 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~----~p~---~~~~~nla~~~~~~~~~~eA~~~~~~al~l~---p~~----~~a~ 144 (428)
.+|..|+..|+|.+|+.++.+.+.- +.. ...+..-...|..++++..+...+++|.... +.+ +...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 6899999999999999999988773 222 5678888999999999999999999987553 122 2345
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHh
Q 014256 145 SRRATARK-ELGKLKESIEDSEFALR 169 (428)
Q Consensus 145 ~~lg~~~~-~lg~~~eA~~~~~~al~ 169 (428)
..-|..+. ..++|..|..+|-.++.
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 55688888 89999999999998874
No 242
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=92.37 E-value=0.6 Score=40.27 Aligned_cols=101 Identities=12% Similarity=-0.021 Sum_probs=63.7
Q ss_pred cccCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHH
Q 014256 48 GNSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAE 127 (428)
Q Consensus 48 ~y~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~ 127 (428)
++..|+++.|.+..... +.. ..|+.+|......|+++-|..||.++-.. ..+...|...|+-+.-.
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~--~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-------~~L~~Ly~~tg~~e~L~ 80 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDS--ITWERLIQEALAQGNASLAEMIYQTQHSF-------DKLSFLYLVTGDVNKLS 80 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCH--HHHHHHHHHHHHTTCHHHHHHHHHHTTCH-------HHHHHHHHHHTCHHHHH
T ss_pred HHhcCCHHHHHHHHHHh-----CCH--HHHHHHHHHHHHcCChHHHHHHHHHhCCH-------HHHHHHHHHhCCHHHHH
Confidence 34568888888776654 122 23889999999999999999999886432 23444556666655544
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014256 128 DDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 167 (428)
Q Consensus 128 ~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a 167 (428)
...+.|...... .....++..+|+++++++.|.+.
T Consensus 81 kla~iA~~~g~~-----n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 81 KMQNIAQTREDF-----GSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHTTCH-----HHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHCccH-----HHHHHHHHHcCCHHHHHHHHHHC
Confidence 444444333221 12335566778888888777553
No 243
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.82 E-value=0.3 Score=49.33 Aligned_cols=136 Identities=10% Similarity=-0.052 Sum_probs=65.5
Q ss_pred cCCCCcchHHHHHhhhh------cCCCC---chHHHHHHHHHHHHHhcCHHHHHH----------HHHHH-----HccCC
Q 014256 50 SYSRNYDPVSHISSSLM------NEEST---PDATSEKELGNECFKQKKFKEAID----------CYSRS-----IALSP 105 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~------~~p~~---~~a~~~~~lg~~~~~~g~~~~Ai~----------~y~~a-----l~~~p 105 (428)
..+++++|..+-..++. .+... ..+..|+..+.++...|+...... .+-.+ +..|+
T Consensus 148 d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~ 227 (523)
T 4b4t_S 148 DSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDN 227 (523)
T ss_dssp -------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSSS
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCc
Confidence 77888888877665541 11111 123345555666666666544221 11112 23344
Q ss_pred c--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHH
Q 014256 106 T--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD--RY---IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 178 (428)
Q Consensus 106 ~--~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p--~~---~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~ 178 (428)
. +.+++-+-..|+..+.|++|.....++.-... .+ ...+|.+|.++...++|.+|..++..|++..|.+..+.
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~ 307 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSL 307 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhh
Confidence 4 77788889999999999999999999963221 11 45677889999999999999999999999988765443
Q ss_pred HHHHHHH
Q 014256 179 KQLAEVK 185 (428)
Q Consensus 179 ~~l~~a~ 185 (428)
+....+.
T Consensus 308 gfr~~a~ 314 (523)
T 4b4t_S 308 GFLQQSN 314 (523)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3333433
No 244
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=90.90 E-value=0.76 Score=44.84 Aligned_cols=84 Identities=12% Similarity=0.043 Sum_probs=66.1
Q ss_pred CCCCcchHHHHHhhhhcCCCCc----------hH----------HHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHH
Q 014256 51 YSRNYDPVSHISSSLMNEESTP----------DA----------TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVA 109 (428)
Q Consensus 51 ~g~~~~Ai~~~~~al~~~p~~~----------~a----------~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~ 109 (428)
.|+.+.|...+.+++.+-.... .. .+...++..+...|++.+|+..+..++..+|. ..+
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~ 207 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPL 207 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHH
Confidence 4566777778888877642210 00 11445677888899999999999999999998 889
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHH
Q 014256 110 YANRAMAYLKLRRFQEAEDDCTEAL 134 (428)
Q Consensus 110 ~~nla~~~~~~~~~~eA~~~~~~al 134 (428)
|..+-.++...|+..+|+..|.++.
T Consensus 208 ~~~lm~al~~~Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 208 WTQLITAYYLSDRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999999999999988774
No 245
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=90.84 E-value=0.33 Score=44.75 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=38.7
Q ss_pred ccCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc
Q 014256 49 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT 106 (428)
Q Consensus 49 y~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~ 106 (428)
++.|++++|+......++.+|.+..... .+...++-.|+|+.|..-++-+.+++|.
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~--~LfqLLcv~G~w~RA~~QL~~~a~l~p~ 63 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRS--SFIELLCIDGDFERADEQLMQSIKLFPE 63 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHH--HHHHHHHHHTCHHHHHHHHHHHHHHCGG
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHH--HHHHHHHhcCCHHHHHHHHHHHHHhCch
Confidence 3556677777777777777777666543 5666666677777777777777777776
No 246
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=90.35 E-value=3.7 Score=44.97 Aligned_cols=95 Identities=8% Similarity=-0.075 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH-----ccCCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Q 014256 76 SEKELGNECFKQKKFKEAIDCYSRSI-----ALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLD-DRYIKAYSRRAT 149 (428)
Q Consensus 76 ~~~~lg~~~~~~g~~~~Ai~~y~~al-----~~~p~~~~~~nla~~~~~~~~~~eA~~~~~~al~l~-p~~~~a~~~lg~ 149 (428)
.+..+-+.|.+.|+.++|...|.+.. ...|+...|+.+-..|.+.|++++|.+.|.+..... .-|...|.-+-.
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 37788899999999999999997643 346889999999999999999999999999987653 224566666767
Q ss_pred HHHHcCCH-HHHHHHHHHHHhh
Q 014256 150 ARKELGKL-KESIEDSEFALRL 170 (428)
Q Consensus 150 ~~~~lg~~-~eA~~~~~~al~l 170 (428)
++.+.|+. ++|...|++....
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHc
Confidence 78888884 7888888887764
No 247
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=90.11 E-value=8.3 Score=32.98 Aligned_cols=83 Identities=12% Similarity=-0.003 Sum_probs=50.2
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHc--c---------------CCc--HHHH
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA--L---------------SPT--AVAY 110 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~--~---------------~p~--~~~~ 110 (428)
..|+|..|+-.+.+. + .+.+.+-...||.+.++|..|+.+.+..+. + +|. .-.+
T Consensus 45 yngEY~R~Lf~L~~l---N----T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy 117 (242)
T 3kae_A 45 LNGEYTRALFHLHKL---N----TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFE 117 (242)
T ss_dssp HTTCHHHHHHHHHTC---C----BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHH
T ss_pred hcchHhHHHHHHHhc---c----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHH
Confidence 456666555554431 1 233355666777777777777777777772 2 122 2345
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 014256 111 ANRAMAYLKLRRFQEAEDDCTEALNLDDR 139 (428)
Q Consensus 111 ~nla~~~~~~~~~~eA~~~~~~al~l~p~ 139 (428)
..+|....+.|+-++|+..+......+|-
T Consensus 118 ~l~a~lltq~g~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 118 SLLGDLCTLSGYREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhcCHHHhhhHhhhhcCCccc
Confidence 55677777777777777777777665553
No 248
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.56 E-value=1.6 Score=46.05 Aligned_cols=77 Identities=17% Similarity=0.133 Sum_probs=44.3
Q ss_pred HHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcC
Q 014256 84 CFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELG 155 (428)
Q Consensus 84 ~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~~~~~~al~l--------~p~~~~a~~~lg~~~~~lg 155 (428)
....|+++.|.++... -.+...|.++|..+++.++++.|+.+|.++-.. ...+.+.+..++......|
T Consensus 662 ~l~~~~~~~A~~~~~~----~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTD----ESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTG 737 (814)
T ss_dssp HHHHTCHHHHHHHHTT----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hhhcCCHHHHHHHHHh----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3445666666555321 123677888888888888888888888775221 1334444445555555555
Q ss_pred CHHHHHHHH
Q 014256 156 KLKESIEDS 164 (428)
Q Consensus 156 ~~~eA~~~~ 164 (428)
++..|...|
T Consensus 738 ~~~~A~~~~ 746 (814)
T 3mkq_A 738 KFNLAFNAY 746 (814)
T ss_dssp CHHHHHHHH
T ss_pred chHHHHHHH
Confidence 555554443
No 249
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.08 E-value=7.5 Score=38.44 Aligned_cols=97 Identities=12% Similarity=0.009 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHc----cCCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHh---cCCCCH--
Q 014256 74 ATSEKELGNECFKQKKFKEAIDCYSRSIA----LSPT---AVAYANRAMAYLKLRRFQEAEDDCTEALN---LDDRYI-- 141 (428)
Q Consensus 74 a~~~~~lg~~~~~~g~~~~Ai~~y~~al~----~~p~---~~~~~nla~~~~~~~~~~eA~~~~~~al~---l~p~~~-- 141 (428)
+.....++..|...|+|.+|...+..... ..+. ..++......|+..++|..|...++++.. -.+..+
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 44456789999999999999999888653 2222 56788889999999999999999998742 223332
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 142 --KAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 142 --~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
..+...|..+...++|.+|..+|..++.-
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34666788899999999999999999864
No 250
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.11 E-value=3.6 Score=43.26 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=32.9
Q ss_pred cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 50 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 50 ~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
..|+++.|.+..... .. ...|..+|..+.+.|+++.|+.||.++-.
T Consensus 664 ~~~~~~~A~~~~~~~-----~~--~~~W~~la~~al~~~~~~~A~~~y~~~~d 709 (814)
T 3mkq_A 664 KVGQLTLARDLLTDE-----SA--EMKWRALGDASLQRFNFKLAIEAFTNAHD 709 (814)
T ss_dssp HHTCHHHHHHHHTTC-----CC--HHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred hcCCHHHHHHHHHhh-----Cc--HhHHHHHHHHHHHcCCHHHHHHHHHHccC
Confidence 455666665553321 12 23488999999999999999999998743
No 251
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.83 E-value=2.8 Score=46.88 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=20.1
Q ss_pred CHHHHHHHHHhccCC----HHHHHHHHhhc
Q 014256 307 SAYEFEVSWRGFAGD----HALQARLLKAI 332 (428)
Q Consensus 307 ~~~ef~~~w~~~~~~----~~~~~~yL~~i 332 (428)
+-|++.=.||-.++| -...|+|+.++
T Consensus 1021 ~Yy~iLYs~ri~r~dyR~AA~vmYe~~~RL 1050 (1139)
T 4fhn_B 1021 CWYNILFSWRYKHQNYRDAAAIIYEKLSRY 1050 (1139)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred CHHHHhHhhhhccCChHHHHHHHHHHHHHh
Confidence 578999999997765 45668888765
No 252
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=84.33 E-value=2.5 Score=41.23 Aligned_cols=93 Identities=8% Similarity=-0.085 Sum_probs=69.9
Q ss_pred CCCccc-cCCCCcchHHHHHhhhhcC----CCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC----Cc----HHHH
Q 014256 44 PSPSGN-SYSRNYDPVSHISSSLMNE----ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS----PT----AVAY 110 (428)
Q Consensus 44 ~~~~~y-~~g~~~~Ai~~~~~al~~~----p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~----p~----~~~~ 110 (428)
+++..| ..|+|.+|...+.+++..- ........+......|...|++.++...|.++.... ++ +...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 445555 8899999988888876642 222333446678889999999999999999986542 33 5556
Q ss_pred HHHHHHHH-HhcCHHHHHHHHHHHHhc
Q 014256 111 ANRAMAYL-KLRRFQEAEDDCTEALNL 136 (428)
Q Consensus 111 ~nla~~~~-~~~~~~eA~~~~~~al~l 136 (428)
..-|..++ ..++|..|..+|-.++.-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 66789999 899999999999998743
No 253
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=83.61 E-value=2.4 Score=46.39 Aligned_cols=90 Identities=9% Similarity=-0.123 Sum_probs=71.7
Q ss_pred CCCccc-cCCCCcchHHHHHhhhh-----cCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc--CCcHHHHHHHHH
Q 014256 44 PSPSGN-SYSRNYDPVSHISSSLM-----NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--SPTAVAYANRAM 115 (428)
Q Consensus 44 ~~~~~y-~~g~~~~Ai~~~~~al~-----~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~--~p~~~~~~nla~ 115 (428)
.+-.+| +.|+.++|...|..... ..| ....|.-+-..|.+.|++++|.+.|.+..+. .|+...|+.+-.
T Consensus 132 aLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P---dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 132 AFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL---TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC---CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 333345 88999999999976432 233 3455889999999999999999999998875 488889999989
Q ss_pred HHHHhcC-HHHHHHHHHHHHhc
Q 014256 116 AYLKLRR-FQEAEDDCTEALNL 136 (428)
Q Consensus 116 ~~~~~~~-~~eA~~~~~~al~l 136 (428)
++.+.|+ .++|...+++....
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHc
Confidence 9999998 47888888887654
No 254
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.97 E-value=2.5 Score=41.75 Aligned_cols=98 Identities=12% Similarity=-0.011 Sum_probs=73.8
Q ss_pred hhcCCCccc-cCCCCcchHHHHHhhhhcCCCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc---CCc----HHHHH
Q 014256 41 AKKPSPSGN-SYSRNYDPVSHISSSLMNEEST-PDATSEKELGNECFKQKKFKEAIDCYSRSIAL---SPT----AVAYA 111 (428)
Q Consensus 41 a~~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~-~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~---~p~----~~~~~ 111 (428)
+...+|..| ..|+++.|.+.|.++....... .....+.....+++..++|..+...+.++-.+ .++ ..+..
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 334455556 8999999999999988764332 23444677778888899999999999998654 222 44566
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 014256 112 NRAMAYLKLRRFQEAEDDCTEALNLDD 138 (428)
Q Consensus 112 nla~~~~~~~~~~eA~~~~~~al~l~p 138 (428)
..|..++..++|..|...|-.++.-..
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 678888999999999999988775543
No 255
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.35 E-value=11 Score=32.14 Aligned_cols=48 Identities=10% Similarity=0.015 Sum_probs=40.5
Q ss_pred HHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 014256 83 ECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEAL 134 (428)
Q Consensus 83 ~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~~~~~~al 134 (428)
.....|+++.|.+..... .+...|..+|...+..|+++-|+.+|.++-
T Consensus 14 LAL~lg~l~~A~e~a~~l----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHhcCCHHHHHHHHHHh----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 445789999999987654 237889999999999999999999999874
No 256
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.31 E-value=8.9 Score=37.90 Aligned_cols=94 Identities=10% Similarity=-0.032 Sum_probs=70.6
Q ss_pred cCCCccc-cCCCCcchHHHHHhhhhc----CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHc----cCCc----HHH
Q 014256 43 KPSPSGN-SYSRNYDPVSHISSSLMN----EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA----LSPT----AVA 109 (428)
Q Consensus 43 ~~~~~~y-~~g~~~~Ai~~~~~al~~----~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~----~~p~----~~~ 109 (428)
..++..| ..|++.+|...+..+... .+.......+......|...++|..|...++++.. ..+. ..+
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~ 220 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEY 220 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHH
Confidence 3445556 789999999999887532 22233455577888899999999999999998642 2222 456
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 014256 110 YANRAMAYLKLRRFQEAEDDCTEALNL 136 (428)
Q Consensus 110 ~~nla~~~~~~~~~~eA~~~~~~al~l 136 (428)
+...|..+...++|.+|-.+|..+...
T Consensus 221 ~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 221 YNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 777899999999999999998888754
No 257
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.22 E-value=7 Score=39.42 Aligned_cols=70 Identities=10% Similarity=-0.010 Sum_probs=56.8
Q ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccC---Cc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 014256 71 TPDATSEKELGNECFKQKKFKEAIDCYSRSIALS---PT---AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY 140 (428)
Q Consensus 71 ~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~---p~---~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~ 140 (428)
...+..+..+-..|...+.|++|.....++.-.. ++ ..+++..|.++.-+++|.+|.+++..|++..|.+
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 3456667788888999999999999999985321 22 4567889999999999999999999999987754
No 258
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=72.05 E-value=14 Score=38.20 Aligned_cols=118 Identities=11% Similarity=-0.066 Sum_probs=70.9
Q ss_pred CCCcchHHHHHhhhhcCCCCch--HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCcHHHHHHHHHHHHHhcCHHHHHHH
Q 014256 52 SRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDD 129 (428)
Q Consensus 52 g~~~~Ai~~~~~al~~~p~~~~--a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~nla~~~~~~~~~~eA~~~ 129 (428)
++.+.|...|...-....-... ...+..+|..++..+...++...+.+......+....-.++...+..|+++.|...
T Consensus 228 ~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Alr~~d~~~a~~~ 307 (618)
T 1qsa_A 228 QDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW 307 (618)
T ss_dssp HCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred cCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHHHHCCCHHHHHHH
Confidence 4667777777665432221111 11122333333444535566677776655444422222233334567899999888
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 014256 130 CTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALR 169 (428)
Q Consensus 130 ~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~ 169 (428)
+...-.-........|=+|.++..+|+.++|...|.++..
T Consensus 308 ~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 308 LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 8765553345677788888888889999999888888875
No 259
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=66.91 E-value=4.9 Score=30.06 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=22.5
Q ss_pred CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 68 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 68 ~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
+|....+..+...|..+-..|+|++|+.+|..+++
T Consensus 10 ~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 10 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34444455556667777777888888888776654
No 260
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=63.68 E-value=46 Score=31.44 Aligned_cols=27 Identities=11% Similarity=-0.060 Sum_probs=24.0
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 014256 138 DRYIKAYSRRATARKELGKLKESIEDS 164 (428)
Q Consensus 138 p~~~~a~~~lg~~~~~lg~~~eA~~~~ 164 (428)
-.++..+..+|..+...|++.+|..+|
T Consensus 133 ~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 133 AGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 367889999999999999999999887
No 261
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=63.66 E-value=9.8 Score=28.11 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHhc
Q 014256 159 ESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 159 eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~~a~~~~ 195 (428)
+|++.|..+++..|+...-..-..++.+++.++-.++
T Consensus 36 ~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RAE~Lk 72 (83)
T 2v6y_A 36 KAIEVLSQIIVLYPESVARTAYEQMINEYKKRISYLE 72 (83)
T ss_dssp HHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555556654433333445556666555444
No 262
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=63.45 E-value=8.7 Score=28.44 Aligned_cols=34 Identities=9% Similarity=-0.057 Sum_probs=15.0
Q ss_pred HHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014256 160 SIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVF 193 (428)
Q Consensus 160 A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~a~~ 193 (428)
|++.|..++..+|+...-..-..++.+++.++-.
T Consensus 45 aie~l~~alk~e~d~~~k~~ir~K~~eY~~RAE~ 78 (83)
T 2w2u_A 45 AIEVLAQLVSLYRDGSTAAIYEQMINEYKRRIEV 78 (83)
T ss_dssp HHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555443222233445555555443
No 263
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=60.57 E-value=64 Score=30.11 Aligned_cols=27 Identities=7% Similarity=-0.315 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 014256 139 RYIKAYSRRATARKELGKLKESIEDSE 165 (428)
Q Consensus 139 ~~~~a~~~lg~~~~~lg~~~eA~~~~~ 165 (428)
.++..+..+|..+..-|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 578899999999999999999998874
No 264
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=59.72 E-value=16 Score=27.50 Aligned_cols=37 Identities=11% Similarity=0.021 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHhc
Q 014256 159 ESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 159 eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~~a~~~~ 195 (428)
.|++.|..+++.+|+...-.....++.+++.++-.+.
T Consensus 40 ~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~LK 76 (93)
T 1wfd_A 40 EGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIK 76 (93)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555566666655443334456666777666655
No 265
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=59.07 E-value=55 Score=26.93 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=42.5
Q ss_pred cCHHHHHHHHHHHHccCCcHHHHHHHHHH-HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 014256 88 KKFKEAIDCYSRSIALSPTAVAYANRAMA-YLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEF 166 (428)
Q Consensus 88 g~~~~Ai~~y~~al~~~p~~~~~~nla~~-~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~ 166 (428)
|+...-+.||-+.-.. .-|..+|.- ...+|+-++-.+.+...+.-.+-++..++.+|.+|.++|+..+|-+.+.+
T Consensus 75 ~NlKrVi~C~~~~n~~----se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~ 150 (172)
T 1wy6_A 75 QNLKSVVECGVINNTL----NEHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIE 150 (172)
T ss_dssp SCTHHHHHHHHHTTCC----CHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hcHHHHHHHHHHhcch----HHHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHH
Confidence 3445555555442111 123344433 33445555555555554555556677777777777777777777777766
Q ss_pred HHh
Q 014256 167 ALR 169 (428)
Q Consensus 167 al~ 169 (428)
|-+
T Consensus 151 AC~ 153 (172)
T 1wy6_A 151 ACK 153 (172)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 266
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=59.05 E-value=12 Score=27.68 Aligned_cols=26 Identities=23% Similarity=0.183 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
+...|..+-+.|+|++|+.+|..+++
T Consensus 22 lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 22 YAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45666777778888888888777665
No 267
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=58.94 E-value=30 Score=24.89 Aligned_cols=38 Identities=13% Similarity=0.167 Sum_probs=31.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHH
Q 014256 146 RRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAE 183 (428)
Q Consensus 146 ~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~ 183 (428)
.+|..+...|++++|..+|-+|+.+.|.-.+...-++.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~ 59 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 57888889999999999999999999987777655554
No 268
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=58.30 E-value=19 Score=25.91 Aligned_cols=29 Identities=24% Similarity=0.472 Sum_probs=26.0
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHccCCc
Q 014256 78 KELGNECFKQKKFKEAIDCYSRSIALSPT 106 (428)
Q Consensus 78 ~~lg~~~~~~g~~~~Ai~~y~~al~~~p~ 106 (428)
-.+|..+...|++++|+.+|-+|+.+.|.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999887
No 269
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.74 E-value=68 Score=34.87 Aligned_cols=95 Identities=18% Similarity=0.151 Sum_probs=70.7
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHh-cC-------------------
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALN-LD------------------- 137 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~-l~------------------- 137 (428)
.+...+...|.++-|.+ .+...|. +..-+-+|.+|+..|++++|..+|.+|-. +.
T Consensus 815 ~l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~ 890 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 890 (950)
T ss_dssp HHHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHT
T ss_pred HHHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcc
Confidence 46777888888876643 4455555 55567899999999999999999988652 11
Q ss_pred -CC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCcHHH
Q 014256 138 -DR--YIKAYSRRATARKELGKLKESIEDSEFALRLE-PQNQEI 177 (428)
Q Consensus 138 -p~--~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~-P~~~~~ 177 (428)
+. ....|......+...|-++-++...+.|+... +++...
T Consensus 891 e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l 934 (950)
T 4gq2_M 891 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDL 934 (950)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHH
T ss_pred cccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccc
Confidence 11 23467778889999999999999999999754 555554
No 270
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=56.17 E-value=15 Score=27.76 Aligned_cols=26 Identities=19% Similarity=0.442 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH
Q 014256 76 SEKELGNECFKQKKFKEAIDCYSRSI 101 (428)
Q Consensus 76 ~~~~lg~~~~~~g~~~~Ai~~y~~al 101 (428)
.+-.++..+.+.|+|++||+|..++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 34567888888889999888876654
No 271
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=55.36 E-value=15 Score=27.10 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
+...|..+-+.|+|++|+.+|..+++
T Consensus 14 lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 14 YAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44566666777888888777766654
No 272
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.75 E-value=1.3e+02 Score=32.75 Aligned_cols=51 Identities=4% Similarity=-0.059 Sum_probs=31.5
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014256 113 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 167 (428)
Q Consensus 113 la~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~a 167 (428)
++..++..|.++-|.+ .+..-|.++-.-|-+|.++...|++++|...|+++
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kA 866 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 866 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4445555666655433 34555566666667777777777777777777654
No 273
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=53.68 E-value=26 Score=27.63 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhhCCCcHHHHH-HHHHHHHHHHHHHHhc
Q 014256 159 ESIEDSEFALRLEPQNQEIKK-QLAEVKSLYEKEVFQK 195 (428)
Q Consensus 159 eA~~~~~~al~l~P~~~~~~~-~l~~a~~~~~~a~~~~ 195 (428)
.|++.|..+++..+.+...+. ...++.+++.++-.+.
T Consensus 43 ~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RAE~LK 80 (117)
T 2cpt_A 43 HAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLK 80 (117)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555666655665433 4456677777776666
No 274
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=52.38 E-value=68 Score=23.64 Aligned_cols=33 Identities=9% Similarity=-0.059 Sum_probs=15.9
Q ss_pred HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHhc
Q 014256 163 DSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 163 ~~~~al~l~P~~~~~~~~l~~a~~~~~~a~~~~ 195 (428)
.|..++..+|+...-..-..++.+++.++-.++
T Consensus 45 ~ll~alk~e~d~~~k~~lr~K~~eYl~RAE~LK 77 (86)
T 4a5x_A 45 LLLQVLKGTKDNTKRCNLREKISKYMDRAENIK 77 (86)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455544332223345666666655544
No 275
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=52.32 E-value=68 Score=26.51 Aligned_cols=49 Identities=8% Similarity=-0.035 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHccCC--c-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 014256 91 KEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 139 (428)
Q Consensus 91 ~~Ai~~y~~al~~~p--~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~ 139 (428)
.++.+.|.-.....= . +..|...|..+...|++.+|...|..++.....
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 346777777666543 2 777888888888888888888888888876543
No 276
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=52.15 E-value=66 Score=27.97 Aligned_cols=82 Identities=12% Similarity=0.062 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEAL--NLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al--~l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
-.+|...+..+ ..+...++...|.... .+.-..+..|...|..+...|++.+|...|+.+++-... ....+.++
T Consensus 80 LklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~---P~~rL~~~ 155 (202)
T 3esl_A 80 LKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR---PYNRLLRS 155 (202)
T ss_dssp HHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB---SHHHHHHH
T ss_pred HHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc---cHHHHHHH
Confidence 34555555543 1233567777777655 455677888889999999999999999999999987643 33455555
Q ss_pred HHHHHHHH
Q 014256 185 KSLYEKEV 192 (428)
Q Consensus 185 ~~~~~~a~ 192 (428)
...|..-+
T Consensus 156 ~~~F~~R~ 163 (202)
T 3esl_A 156 LSNYEDRL 163 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 277
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=50.79 E-value=29 Score=25.47 Aligned_cols=35 Identities=14% Similarity=0.108 Sum_probs=17.3
Q ss_pred HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHhc
Q 014256 161 IEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 195 (428)
Q Consensus 161 ~~~~~~al~l~P~~~~~~~~l~~a~~~~~~a~~~~ 195 (428)
++.|..+++..|+...-..-..++.+++.++-.+.
T Consensus 40 ie~l~~a~k~e~~~~~k~~l~~k~~eYl~RAE~Lk 74 (85)
T 2v6x_A 40 LDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQLK 74 (85)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455544333334445666666665554
No 278
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=50.26 E-value=22 Score=26.74 Aligned_cols=28 Identities=25% Similarity=0.189 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEAL 134 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al 134 (428)
+..+..+|..+++.|+|++|+++..+|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4456677888888888888887766553
No 279
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=48.48 E-value=77 Score=26.55 Aligned_cols=48 Identities=23% Similarity=0.265 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHccC--Cc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 014256 91 KEAIDCYSRSIALS--PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD 138 (428)
Q Consensus 91 ~~Ai~~y~~al~~~--p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p 138 (428)
..+.+.|.-..... -. +..|...|..+...|+|.+|...|..++....
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A 127 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKA 127 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 34666777666544 33 88888889999999999999999999988764
No 280
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.62 E-value=69 Score=35.58 Aligned_cols=90 Identities=18% Similarity=0.118 Sum_probs=57.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---C-----------------
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNL---D----------------- 137 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l---~----------------- 137 (428)
.+...+...|.++-|.+. +...|. +...+.+|.+|+..|++++|..+|.+|-.- +
T Consensus 817 ~l~~~l~~~~~~~~~~~l----~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~ 892 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQL----IGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 892 (1139)
T ss_dssp HHHHHHHHHSCTTHHHHH----HHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT
T ss_pred HHHHHHHHhhhHHHHHHH----hhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc
Confidence 445556666777665442 222333 445577888888888888888888776321 0
Q ss_pred ---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 014256 138 ---DRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 172 (428)
Q Consensus 138 ---p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P 172 (428)
...+..|+.....+...|.++.+++..+.|+...+
T Consensus 893 ~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~ 930 (1139)
T 4fhn_B 893 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKE 930 (1139)
T ss_dssp TSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCC
T ss_pred cccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 11234455666677778888888888888887664
No 281
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=46.94 E-value=23 Score=26.89 Aligned_cols=29 Identities=24% Similarity=0.472 Sum_probs=26.1
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHccCCc
Q 014256 78 KELGNECFKQKKFKEAIDCYSRSIALSPT 106 (428)
Q Consensus 78 ~~lg~~~~~~g~~~~Ai~~y~~al~~~p~ 106 (428)
..+|..+...|+++.|+.+|-+|+.+.|.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999887
No 282
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=45.76 E-value=45 Score=32.99 Aligned_cols=78 Identities=8% Similarity=-0.040 Sum_probs=54.3
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcC--------C--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCc---HH
Q 014256 111 ANRAMAYLKLRRFQEAEDDCTEALNLD--------D--RYIKAYSRRATARKELGKLKESIEDSEFALRL-EPQN---QE 176 (428)
Q Consensus 111 ~nla~~~~~~~~~~eA~~~~~~al~l~--------p--~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l-~P~~---~~ 176 (428)
+++-.+|+++++...|...++..-... | .-+..+|.+|..+...++|.+|..++..|++. .|.. +.
T Consensus 180 n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~~~~~ 259 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPLTNQA 259 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCCCCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccccchh
Confidence 456678999999888877765432221 1 12456888999999999999999999999998 7754 22
Q ss_pred HHHHHHHHHHHH
Q 014256 177 IKKQLAEVKSLY 188 (428)
Q Consensus 177 ~~~~l~~a~~~~ 188 (428)
..++...+..++
T Consensus 260 ~~~n~~~ILkyL 271 (455)
T 3t5v_B 260 ITRNGTRILNYM 271 (455)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 344444444443
No 283
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=45.37 E-value=71 Score=26.29 Aligned_cols=90 Identities=11% Similarity=-0.150 Sum_probs=64.4
Q ss_pred hhcCCCccc---cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHH-HHHHhcCHHHHHHHHHHHHccC-CcHHHHHHHHH
Q 014256 41 AKKPSPSGN---SYSRNYDPVSHISSSLMNEESTPDATSEKELGN-ECFKQKKFKEAIDCYSRSIALS-PTAVAYANRAM 115 (428)
Q Consensus 41 a~~~~~~~y---~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~-~~~~~g~~~~Ai~~y~~al~~~-p~~~~~~nla~ 115 (428)
.+..+|..| .-|+...-+.+|-+.=... . +.++|. .+..+|+-++--+.+...+.-. |++.....+|.
T Consensus 61 vLd~IGkiFDis~C~NlKrVi~C~~~~n~~s---e----~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~ 133 (172)
T 1wy6_A 61 VLDKIGSYFDLDKCQNLKSVVECGVINNTLN---E----HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIAN 133 (172)
T ss_dssp HHHHHGGGSCGGGCSCTHHHHHHHHHTTCCC---H----HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHH
T ss_pred HHHHHhhhcCcHhhhcHHHHHHHHHHhcchH---H----HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHH
Confidence 345666666 5577777888887753222 1 334443 5567788888778887765544 45899999999
Q ss_pred HHHHhcCHHHHHHHHHHHHhcC
Q 014256 116 AYLKLRRFQEAEDDCTEALNLD 137 (428)
Q Consensus 116 ~~~~~~~~~eA~~~~~~al~l~ 137 (428)
+|.+.|+..+|.+...+|.+..
T Consensus 134 Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 134 ALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHhcchhhHHHHHHHHHHhh
Confidence 9999999999999999998754
No 284
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=45.15 E-value=1.1e+02 Score=25.62 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=20.4
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHccCC
Q 014256 78 KELGNECFKQKKFKEAIDCYSRSIALSP 105 (428)
Q Consensus 78 ~~lg~~~~~~g~~~~Ai~~y~~al~~~p 105 (428)
+..|..+|..|+|-+|-+.++.+-...+
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~ 63 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYG 63 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcC
Confidence 4567777778888888888877766543
No 285
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=43.85 E-value=28 Score=26.19 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
+...|..+-..|+|++|+.+|..+++
T Consensus 18 lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 18 VLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44555666667777777777666554
No 286
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=43.40 E-value=83 Score=27.79 Aligned_cols=49 Identities=14% Similarity=0.199 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHccCC--c-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 014256 91 KEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 139 (428)
Q Consensus 91 ~~Ai~~y~~al~~~p--~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~ 139 (428)
.++...|.-.....= . +.+|...|..+...|+|.+|...|..++.....
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 467777777766543 3 888999999999999999999999999987644
No 287
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=43.29 E-value=1.3e+02 Score=25.05 Aligned_cols=59 Identities=12% Similarity=0.040 Sum_probs=45.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHH-HHHH--HHHcCCHHHHHHHHHHHHh
Q 014256 111 ANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSR-RATA--RKELGKLKESIEDSEFALR 169 (428)
Q Consensus 111 ~nla~~~~~~~~~~eA~~~~~~al~l~p~~------~~a~~~-lg~~--~~~lg~~~eA~~~~~~al~ 169 (428)
+..|..++..|+|=+|-+.++.+....+.. ...+.. +|.+ +...|+...|...+.+++.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 456777888899999999999999887654 344555 5444 4557999999999999986
No 288
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=43.09 E-value=66 Score=24.17 Aligned_cols=28 Identities=7% Similarity=-0.003 Sum_probs=21.4
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCc
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIALSPT 106 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~~p~ 106 (428)
..|..+|..|+|-+|-+.++..-...|.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~ 33 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATG 33 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCC
Confidence 4577788888888888888887776654
No 289
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=42.81 E-value=1e+02 Score=22.98 Aligned_cols=46 Identities=17% Similarity=0.181 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc---HHHH-HHHHHHHH
Q 014256 73 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAY-ANRAMAYL 118 (428)
Q Consensus 73 ~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~-~nla~~~~ 118 (428)
.+..+...|..+++.++|.+|...|+++.....+ ...+ +.++.|--
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~k 101 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRK 101 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHH
Confidence 4556778899999999999999999999876544 2233 55666643
No 290
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=42.67 E-value=30 Score=25.35 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
+...|...-..|+|++|+.+|..+++
T Consensus 16 l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 16 LVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44555566667888888888776655
No 291
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=42.28 E-value=44 Score=25.33 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHH
Q 014256 145 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 184 (428)
Q Consensus 145 ~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a 184 (428)
..+|..+...|.++.|+.+|-+|+.+.|.-.....-++..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~T 63 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQT 63 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 3578999999999999999999999999877776665554
No 292
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=42.27 E-value=47 Score=28.81 Aligned_cols=92 Identities=13% Similarity=0.113 Sum_probs=55.8
Q ss_pred CCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH
Q 014256 69 ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK 142 (428)
Q Consensus 69 p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~------~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~ 142 (428)
|....+...+-+|..++.+++|.+|.+++..|+...|. ......+--+-+-+|++.. ...+++ .+. .
T Consensus 9 ~~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~~~--~ 81 (203)
T 3t5x_A 9 STAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT-VELLKK----YHL--M 81 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----TTC--G
T ss_pred CHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----Cch--h
Confidence 34445667888999999999999999999999998775 2233444455566777543 222321 111 2
Q ss_pred HHHHHHHHHHHcCCH---HHHHHHHHHHH
Q 014256 143 AYSRRATARKELGKL---KESIEDSEFAL 168 (428)
Q Consensus 143 a~~~lg~~~~~lg~~---~eA~~~~~~al 168 (428)
.|..+..+. +.|+. +++++.++..+
T Consensus 82 ~y~~L~~Av-r~Gdl~~f~~~l~~~~~~f 109 (203)
T 3t5x_A 82 QFAEVTRAV-SEGNLLLLHEALAKHEAFF 109 (203)
T ss_dssp GGHHHHHHH-HHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHH-HhCCHHHHHHHHHHhHHHH
Confidence 456666554 44553 44554444433
No 293
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=40.09 E-value=58 Score=32.18 Aligned_cols=63 Identities=13% Similarity=-0.032 Sum_probs=47.8
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHH--------ccCCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCC
Q 014256 78 KELGNECFKQKKFKEAIDCYSRSI--------ALSPT---AVAYANRAMAYLKLRRFQEAEDDCTEALNL-DDRY 140 (428)
Q Consensus 78 ~~lg~~~~~~g~~~~Ai~~y~~al--------~~~p~---~~~~~nla~~~~~~~~~~eA~~~~~~al~l-~p~~ 140 (428)
..+-.+|++.|+..-+...+...- ...|. ...++.+|..++..++|.+|.+.+..|+.. -|..
T Consensus 180 n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 344568888898888877776432 22333 456788999999999999999999999988 6644
No 294
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=39.76 E-value=32 Score=27.10 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=12.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHH
Q 014256 78 KELGNECFKQKKFKEAIDCYSR 99 (428)
Q Consensus 78 ~~lg~~~~~~g~~~~Ai~~y~~ 99 (428)
...|..+-..|+|++|+.+|..
T Consensus 22 v~~Ave~D~ag~y~eAl~lY~~ 43 (117)
T 2cpt_A 22 ASKAAQEDKAGNYEEALQLYQH 43 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHH
Confidence 3444445556677777666544
No 295
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=38.45 E-value=61 Score=28.07 Aligned_cols=51 Identities=14% Similarity=0.006 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHH-----HHHHHHHHHcCCH
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAY-----SRRATARKELGKL 157 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~-----~~lg~~~~~lg~~ 157 (428)
....+.+|..++..++|.+|...+..|+..-|...... -.+-.+..-+|++
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCC
Confidence 45678899999999999999999999999877664332 2233344556764
No 296
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=37.71 E-value=83 Score=27.33 Aligned_cols=61 Identities=11% Similarity=-0.043 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCC--c-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD 138 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p--~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p 138 (428)
|...+..+ ..+...++...|.-.....= . +..|...|..+...|+|.+|...|..++....
T Consensus 83 Wl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 83 WIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp HHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 44555543 23446778888877766543 3 88888899999999999999999999998764
No 297
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=37.36 E-value=78 Score=32.81 Aligned_cols=48 Identities=15% Similarity=0.049 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH
Q 014256 110 YANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKL 157 (428)
Q Consensus 110 ~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~lg~~ 157 (428)
...+|...+..|+|.-|.+.++.++..+|+|..+...++.+|.++|.-
T Consensus 452 ~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 452 LLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 445677788899999999999999999999999999999999988843
No 298
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=35.46 E-value=1.5e+02 Score=27.58 Aligned_cols=25 Identities=16% Similarity=-0.089 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHH
Q 014256 107 AVAYANRAMAYLKLRRFQEAEDDCT 131 (428)
Q Consensus 107 ~~~~~nla~~~~~~~~~~eA~~~~~ 131 (428)
+..+..+|..|.+-+++.+|...|-
T Consensus 134 p~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 134 PYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 7888899999999999999988765
No 299
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=31.40 E-value=3.3e+02 Score=25.42 Aligned_cols=110 Identities=13% Similarity=0.056 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCC------c---HHH--------HHHHHHHHHHh-c-----CHHHHHH--HHH
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSP------T---AVA--------YANRAMAYLKL-R-----RFQEAED--DCT 131 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p------~---~~~--------~~nla~~~~~~-~-----~~~eA~~--~~~ 131 (428)
....|..++..|+|.+|+..|+.+|..-| . ..+ .|-+|+..... + +....++ .|-
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 45689999999999999999999886422 1 111 12223222110 0 0011111 111
Q ss_pred HHHhcCCCCHHHHHHHH-HHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014256 132 EALNLDDRYIKAYSRRA-TARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 190 (428)
Q Consensus 132 ~al~l~p~~~~a~~~lg-~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 190 (428)
....+.|.+...-.+.| ...++.++|..|....++.|++.|....+ ++|.+.+..
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a----~qArkil~~ 252 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRA----EQARKIKNK 252 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHH----HHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHH----HHHHHHHHH
Confidence 12233444433333333 45578899999999999999999964433 345554443
No 300
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=30.12 E-value=47 Score=25.85 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=29.3
Q ss_pred ccChhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHhhhc
Q 014256 387 CLSLADKADLRKVWDETFCNESTPIEYAEILDNLRSKYC 425 (428)
Q Consensus 387 ~ls~~ek~~~~~l~~~l~~~~~~~~~~~~~~~~L~~~y~ 425 (428)
=+|..+|+.++.++.+|..+. .+....|..+|-
T Consensus 59 KCTekQK~~~~kvi~~l~~n~------P~~W~~L~~KyD 91 (109)
T 2gvs_A 59 KCNEKQKEGTKKVLKHLINHK------PDVWAQLKAKYD 91 (109)
T ss_dssp TSCHHHHHHHHHHHHHHHHHC------HHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHcC------hHHHHHHHHHHC
Confidence 389999999999999999876 578999999995
No 301
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=29.95 E-value=43 Score=30.29 Aligned_cols=37 Identities=14% Similarity=0.035 Sum_probs=21.0
Q ss_pred HHHHHHHHhccCCC--chhHHHhccChhhHHHHHHHHHH
Q 014256 366 DLAIKYLEYLTMVP--RFDLVIMCLSLADKADLRKVWDE 402 (428)
Q Consensus 366 ~~~~~~L~~l~~~~--RF~~~~~~ls~~ek~~~~~l~~~ 402 (428)
+.+..+|..|.... .-.-.+.+++..+...+.+++..
T Consensus 94 d~~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~ 132 (278)
T 2yvy_A 94 DDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARY 132 (278)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHSCHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCccHHHHHHHHHcCCHHHHHHHHHHHCC
Confidence 34445555554321 22233457788888888887774
No 302
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=29.20 E-value=3.5e+02 Score=25.13 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=64.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHccCC-----c----HHH--------HHHHHHHHHHh-cC-----HHHHHHHHHH-
Q 014256 77 EKELGNECFKQKKFKEAIDCYSRSIALSP-----T----AVA--------YANRAMAYLKL-RR-----FQEAEDDCTE- 132 (428)
Q Consensus 77 ~~~lg~~~~~~g~~~~Ai~~y~~al~~~p-----~----~~~--------~~nla~~~~~~-~~-----~~eA~~~~~~- 132 (428)
....|..++..|+|.+|+..|+.+|..-| + ..+ .|-+|+..... +. .++..+.++-
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 45789999999999999999999987543 1 111 22233322111 11 1221111222
Q ss_pred ----HHhcCCCCHHHHHHHH-HHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014256 133 ----ALNLDDRYIKAYSRRA-TARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 190 (428)
Q Consensus 133 ----al~l~p~~~~a~~~lg-~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 190 (428)
...+.|.+...-.+.| ...++.++|..|....++.|++.|.... .++|.+.+..
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~----~~qArkil~~ 243 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEV----AQQTRKILSA 243 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHH----HHHHHHHHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH----HHHHHHHHHH
Confidence 2234454444444444 3557889999999999999999886332 2345554443
No 303
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=26.31 E-value=2.6e+02 Score=23.23 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=48.1
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHccCCc---HHHHHHHHHHHHHhcCHHHH-HHHHHHHHhcCCCCHHHHHHHHHHHHHc
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYANRAMAYLKLRRFQEA-EDDCTEALNLDDRYIKAYSRRATARKEL 154 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~~nla~~~~~~~~~~eA-~~~~~~al~l~p~~~~a~~~lg~~~~~l 154 (428)
.-++..|-..+|...+..+.. .+|. ...-+.+|..|.+...+.+- .......+.+..+ --+.+-+++...
T Consensus 13 i~a~~afl~~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkSd---e~yL~YWIyiGR 86 (161)
T 2ynq_A 13 IQSTELFLQNKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKTD---EQYMLYWIYIGR 86 (161)
T ss_dssp HHHHHHHTTTCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTSC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccCC---HHHHHHHHHHcC
Confidence 456677778888888877654 4554 55677788888887665422 2222222222211 223344666677
Q ss_pred CCHHHHHHHHH
Q 014256 155 GKLKESIEDSE 165 (428)
Q Consensus 155 g~~~eA~~~~~ 165 (428)
|++++|+....
T Consensus 87 g~~~eAlDiA~ 97 (161)
T 2ynq_A 87 SQSEEALELAR 97 (161)
T ss_dssp TCHHHHHHHHH
T ss_pred CchHHHHHHHH
Confidence 88888876543
No 304
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=25.98 E-value=2e+02 Score=29.41 Aligned_cols=117 Identities=9% Similarity=-0.047 Sum_probs=76.7
Q ss_pred CCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHH
Q 014256 51 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDD 129 (428)
Q Consensus 51 ~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~ 129 (428)
.+...++...+.+......+.. .. ....+.. ++.|++..|...+.+.-..... ....+-+|.++..+|+.++|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~-~~-e~~~r~A-lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~ 341 (618)
T 1qsa_A 265 NDVTDEQAKWRDDAIMRSQSTS-LI-ERRVRMA-LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEI 341 (618)
T ss_dssp TTCCHHHHHHHHHHHHTCCCHH-HH-HHHHHHH-HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCCChHHHHHHHhccccCCChH-HH-HHHHHHH-HHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHH
Confidence 3435667777777655443322 22 3344554 4679999999999775543233 66777888899999999999999
Q ss_pred HHHHHhcC-----------------------CC--C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 130 CTEALNLD-----------------------DR--Y---IKAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 130 ~~~al~l~-----------------------p~--~---~~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
|.++..-. +. . ......++..+..+|....|...+..++..
T Consensus 342 ~~~~a~~~~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~ 410 (618)
T 1qsa_A 342 LHQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKS 410 (618)
T ss_dssp HHHHHTSCSHHHHHHHHHTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHhcCCChHHHHHHHHcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhc
Confidence 99887421 00 0 012345666777778888877777766653
No 305
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=24.64 E-value=16 Score=33.24 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHcc
Q 014256 68 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL 103 (428)
Q Consensus 68 ~p~~~~a~~~~~lg~~~~~~g~~~~Ai~~y~~al~~ 103 (428)
+|....|..+...|..+-+.|+|++|+.+|..++++
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 444444444555666666677777777777766654
No 306
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=24.29 E-value=2.1e+02 Score=23.49 Aligned_cols=62 Identities=11% Similarity=0.098 Sum_probs=45.2
Q ss_pred HHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014256 125 EAEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 189 (428)
Q Consensus 125 eA~~~~~~al~--l~p~~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 189 (428)
++...|..... +.-..+..|...|..+...|++.+|...|+.+++-...- ...+.++...|.
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P---~~rL~~~~~~F~ 146 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP---REFLQQQYRLFQ 146 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS---HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc---HHHHHHHHHHHH
Confidence 46666666654 456778889999999999999999999999999875433 334444444443
No 307
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=24.01 E-value=1.4e+02 Score=29.11 Aligned_cols=31 Identities=6% Similarity=-0.096 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 140 YIKAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 140 ~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
...|+..+|.+|...|+|++|....++++..
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 3567888999999999999999999999864
No 308
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=23.96 E-value=52 Score=23.89 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHc
Q 014256 79 ELGNECFKQKKFKEAIDCYSRSIA 102 (428)
Q Consensus 79 ~lg~~~~~~g~~~~Ai~~y~~al~ 102 (428)
.+|.-|...|+|+.|+.+|+-+++
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHH
No 309
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=23.57 E-value=1.5e+02 Score=29.01 Aligned_cols=31 Identities=6% Similarity=0.102 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 014256 141 IKAYSRRATARKELGKLKESIEDSEFALRLE 171 (428)
Q Consensus 141 ~~a~~~lg~~~~~lg~~~eA~~~~~~al~l~ 171 (428)
..|+..+|.+|...|+|++|....++++...
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 4578888999999999999999999998653
No 310
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=23.54 E-value=74 Score=28.89 Aligned_cols=70 Identities=14% Similarity=0.243 Sum_probs=42.5
Q ss_pred HHHHHHhhc--CCCchhHHhhhcCCHHHHHHHHHHHHhhccccHHHHHHHHHhccCCCchhHHHhccChhhHHHHHHHHH
Q 014256 324 LQARLLKAI--SPNALPQIFKNALSASILIDIVKVVATFFTGEVDLAIKYLEYLTMVPRFDLVIMCLSLADKADLRKVWD 401 (428)
Q Consensus 324 ~~~~yL~~i--~p~~l~~if~~~l~~~~l~~il~~l~~~~~~~~~~~~~~L~~l~~~~RF~~~~~~ls~~ek~~~~~l~~ 401 (428)
.+...|..+ +++....|+ ..|+++-+.+|+.-| +++.+.++|..|....|=. ++.+|+..++..++.++.
T Consensus 62 ~~~~vl~~l~~~~~~~~~ll-~~l~~d~~~~ll~~l------~~d~~~~ll~~l~~~~~~~-i~~~l~~~e~~~i~~ll~ 133 (286)
T 2oux_A 62 ELADMFDVIEEDNENMKDYL-AEMRPSYAADMLAEM------YTDNAVDLLNMLDKSQKAK-YLSLLSSEEAGEIKELLH 133 (286)
T ss_dssp HHHHHHTTSCTTSSSTTHHH-HHSCHHHHHHHHTTS------CHHHHHHHHHHSCHHHHHH-HHHTSCHHHHHHHHHHTT
T ss_pred HHHHHHHhccCCHHHHHHHH-HhCCHHHHHHHHHhC------CHHHHHHHHHhCCHHHHHH-HHHcCCHHHHHHHHHHhc
Confidence 344444445 444444444 234444444443322 2466788888888866644 577899999888888763
No 311
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=23.48 E-value=2.3e+02 Score=28.01 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 123 FQEAEDDCTEALNLDDR-----------YIKAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 123 ~~eA~~~~~~al~l~p~-----------~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
|+..+.+++.|+..-|. ...|+..+|.++...++|++|....++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56667777777765442 2457888999999999999999999999863
No 312
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=23.09 E-value=6.8 Score=39.44 Aligned_cols=120 Identities=15% Similarity=0.105 Sum_probs=88.1
Q ss_pred hhcccchhhhhccChhhhh---------cCCCccc-cCCCCcchHHHHHhhhhcCCCCchHHHHHHHHHHHHHhcCHHHH
Q 014256 24 KHKASSKDNLVSSSLKSAK---------KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEA 93 (428)
Q Consensus 24 ~~~~~~~~~~~~~~~~~a~---------~~~~~~y-~~g~~~~Ai~~~~~al~~~p~~~~a~~~~~lg~~~~~~g~~~~A 93 (428)
.+..-|...|..+.|+.|. .+++.++ .+|+|..|++.-+++ ++... |++...+|...++|.-|
T Consensus 146 ~iq~VGDrcf~e~lYeAAKilys~isN~akLAstLV~L~~yq~AVdaArKA-----ns~kt--WKeV~~ACvd~~EfrLA 218 (624)
T 3lvg_A 146 HIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRT--WKEVCFACVDGKEFRLA 218 (624)
T ss_dssp CTHHHHHHHHHSCCSTTSSTTGGGSCCCTTTSSSSSSCSGGGSSTTTTTTC-----CSSCS--HHHHTHHHHHSCTTTTT
T ss_pred cHHHHHHHHHHccCHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHhc-----CChhH--HHHHHHHHhCchHHHHH
Confidence 3344677778888888765 3444446 889999998876665 23334 88999999999999999
Q ss_pred HHHHHHHHccCCc-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Q 014256 94 IDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL 154 (428)
Q Consensus 94 i~~y~~al~~~p~-~~~~~nla~~~~~~~~~~eA~~~~~~al~l~p~~~~a~~~lg~~~~~l 154 (428)
.-|--..+-.-.. .. +-..|...|.|++-+..++.++.+..-+...+--+|.+|.+-
T Consensus 219 qicGLniIvhadeL~e----lv~~YE~~G~f~ELIsLlEaglglErAHmGmFTELaILYsKY 276 (624)
T 3lvg_A 219 QMCGLHIVVHADELEE----LINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 276 (624)
T ss_dssp THHHHHHHCCSSCCSG----GGSSSSTTCCCTTSTTTHHHHTTSTTCCHHHHHHHHHHHHSS
T ss_pred HHhcchhcccHHHHHH----HHHHHHhCCCHHHHHHHHHHHhCCCchhHHHHHHHHHHHHhc
Confidence 8886665543222 21 123467788999999999999999988988888899888654
No 313
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=22.76 E-value=1.5e+02 Score=29.00 Aligned_cols=31 Identities=16% Similarity=0.064 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 140 YIKAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 140 ~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
..-|+..+|.+|...|+|++|....++++..
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3567888999999999999999999999864
No 314
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=20.87 E-value=2e+02 Score=28.01 Aligned_cols=14 Identities=7% Similarity=-0.026 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHH
Q 014256 180 QLAEVKSLYEKEVF 193 (428)
Q Consensus 180 ~l~~a~~~~~~a~~ 193 (428)
.+.+|....++.+.
T Consensus 205 ~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 205 DNRKAFDLADQLIK 218 (454)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHh
Confidence 35566666655554
No 315
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.77 E-value=2.5e+02 Score=27.46 Aligned_cols=48 Identities=21% Similarity=0.107 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhcCCC-----------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 014256 123 FQEAEDDCTEALNLDDR-----------------------YIKAYSRRATARKELGKLKESIEDSEFALRL 170 (428)
Q Consensus 123 ~~eA~~~~~~al~l~p~-----------------------~~~a~~~lg~~~~~lg~~~eA~~~~~~al~l 170 (428)
|+..+.+++.|+..-|. ..-|+..+|.+|...|+|++|....++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 55667777777764331 2357888999999999999999999999864
Done!