Query 014257
Match_columns 428
No_of_seqs 241 out of 1365
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 03:22:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014257.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014257hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4176 Uncharacterized conser 100.0 3.9E-39 8.4E-44 321.6 18.1 239 105-354 76-315 (323)
2 PF13532 2OG-FeII_Oxy_2: 2OG-F 100.0 1.2E-33 2.6E-38 261.5 12.4 182 145-341 1-194 (194)
3 PRK15401 alpha-ketoglutarate-d 100.0 2.7E-29 5.9E-34 238.7 19.6 182 140-343 14-213 (213)
4 KOG3200 Uncharacterized conser 99.9 2.5E-26 5.5E-31 209.4 13.0 177 140-345 8-216 (224)
5 TIGR00568 alkb DNA alkylation 99.9 7.7E-25 1.7E-29 202.0 16.4 159 150-328 2-169 (169)
6 COG3145 AlkB Alkylated DNA rep 99.9 1E-21 2.2E-26 184.1 14.5 176 140-338 11-194 (194)
7 KOG3959 2-Oxoglutarate- and ir 99.8 4.5E-21 9.8E-26 182.1 3.8 184 143-351 71-285 (306)
8 KOG2731 DNA alkylation damage 98.4 2.9E-07 6.4E-12 93.1 5.7 126 193-329 164-292 (378)
9 PF03171 2OG-FeII_Oxy: 2OG-Fe( 97.8 1E-05 2.3E-10 67.0 2.6 83 248-342 1-96 (98)
10 PRK05467 Fe(II)-dependent oxyg 97.7 0.00058 1.3E-08 66.3 12.1 79 250-341 81-175 (226)
11 smart00702 P4Hc Prolyl 4-hydro 97.5 0.0063 1.4E-07 55.8 15.9 165 144-341 1-176 (178)
12 PF13640 2OG-FeII_Oxy_3: 2OG-F 96.3 0.0034 7.3E-08 52.0 3.0 83 251-341 1-98 (100)
13 PLN00052 prolyl 4-hydroxylase; 96.2 0.24 5.2E-06 50.4 16.4 172 139-340 49-248 (310)
14 PF12933 FTO_NTD: FTO catalyti 94.9 0.035 7.5E-07 54.4 4.6 92 245-342 135-250 (253)
15 PF12851 Tet_JBP: Oxygenase do 94.4 0.27 5.9E-06 45.7 9.1 83 246-340 74-167 (171)
16 TIGR01762 chlorin-enz chlorina 93.4 3.3 7.1E-05 41.6 15.4 42 303-348 208-252 (288)
17 PF09859 Oxygenase-NA: Oxygena 93.2 0.34 7.3E-06 45.1 7.3 113 223-340 41-168 (173)
18 COG3128 PiuC Uncharacterized i 92.8 0.27 5.9E-06 46.7 6.2 85 252-341 85-178 (229)
19 KOG1591 Prolyl 4-hydroxylase a 90.6 4.1 8.9E-05 41.2 12.3 167 139-339 92-279 (289)
20 PF13759 2OG-FeII_Oxy_5: Putat 84.0 1.9 4.2E-05 36.0 4.8 86 251-340 2-100 (101)
21 TIGR02408 ectoine_ThpD ectoine 82.5 19 0.0004 35.7 11.8 26 144-169 28-53 (277)
22 PLN02904 oxidoreductase 79.7 6.1 0.00013 40.9 7.5 80 250-342 209-303 (357)
23 PTZ00273 oxidase reductase; Pr 79.5 4.8 0.0001 40.8 6.6 82 249-343 177-274 (320)
24 TIGR02466 conserved hypothetic 77.0 11 0.00024 36.1 7.8 90 247-340 94-196 (201)
25 PLN02216 protein SRG1 74.5 10 0.00022 39.2 7.4 80 249-342 210-306 (357)
26 PLN02947 oxidoreductase 72.9 11 0.00024 39.3 7.3 81 249-343 225-321 (374)
27 PLN02997 flavonol synthase 72.6 10 0.00022 38.8 6.7 79 250-342 184-278 (325)
28 PF08007 Cupin_4: Cupin superf 72.5 6.9 0.00015 39.7 5.5 83 250-341 113-208 (319)
29 PLN02984 oxidoreductase, 2OG-F 71.2 14 0.0003 38.1 7.4 79 249-341 200-295 (341)
30 PLN02515 naringenin,2-oxogluta 70.8 15 0.00034 38.0 7.7 83 249-343 195-293 (358)
31 COG5285 Protein involved in bi 70.7 9.8 0.00021 38.6 6.0 81 261-346 132-233 (299)
32 PLN02639 oxidoreductase, 2OG-F 70.2 14 0.0003 37.8 7.2 81 249-343 190-287 (337)
33 PLN02485 oxidoreductase 69.8 13 0.00028 37.8 6.8 80 250-342 185-285 (329)
34 PLN02912 oxidoreductase, 2OG-F 69.4 13 0.00028 38.4 6.7 81 249-343 197-293 (348)
35 PLN03002 oxidoreductase, 2OG-F 69.3 12 0.00026 38.2 6.5 85 249-342 182-282 (332)
36 PLN00417 oxidoreductase, 2OG-F 67.7 14 0.0003 38.1 6.6 80 250-343 204-300 (348)
37 PLN02393 leucoanthocyanidin di 66.9 17 0.00036 37.7 7.0 79 250-342 214-309 (362)
38 PLN02299 1-aminocyclopropane-1 64.1 16 0.00034 37.3 6.2 80 250-343 159-255 (321)
39 PLN02365 2-oxoglutarate-depend 64.1 18 0.00039 36.4 6.5 86 248-345 148-250 (300)
40 PLN02704 flavonol synthase 63.3 15 0.00032 37.6 5.8 80 250-343 200-295 (335)
41 PLN03001 oxidoreductase, 2OG-F 62.0 19 0.0004 35.8 6.0 80 250-343 117-212 (262)
42 COG2850 Uncharacterized conser 61.3 31 0.00068 36.1 7.6 99 236-342 107-214 (383)
43 PLN02750 oxidoreductase, 2OG-F 59.5 35 0.00077 35.0 7.8 83 249-343 193-291 (345)
44 COG3826 Uncharacterized protei 58.4 34 0.00074 32.8 6.7 102 223-331 103-220 (236)
45 PLN02403 aminocyclopropanecarb 57.4 30 0.00065 35.0 6.7 80 250-343 154-251 (303)
46 PLN02758 oxidoreductase, 2OG-F 57.2 34 0.00073 35.5 7.2 80 250-343 212-309 (361)
47 PLN03178 leucoanthocyanidin di 56.8 23 0.0005 36.6 5.9 80 250-343 212-307 (360)
48 PLN02156 gibberellin 2-beta-di 56.5 41 0.00088 34.6 7.6 81 249-342 178-276 (335)
49 PLN02276 gibberellin 20-oxidas 54.7 36 0.00079 35.2 7.0 81 249-343 206-302 (361)
50 PLN02254 gibberellin 3-beta-di 51.0 47 0.001 34.4 7.1 81 250-343 211-307 (358)
51 PF05118 Asp_Arg_Hydrox: Aspar 49.5 18 0.0004 33.1 3.5 82 247-345 78-162 (163)
52 KOG0143 Iron/ascorbate family 44.6 72 0.0016 32.7 7.2 81 250-343 177-274 (322)
53 PRK13264 3-hydroxyanthranilate 41.2 1.8E+02 0.0039 27.6 8.6 90 250-357 34-124 (177)
54 TIGR03037 anthran_nbaC 3-hydro 40.1 2.2E+02 0.0047 26.6 8.9 90 250-357 28-118 (159)
55 KOG2731 DNA alkylation damage 34.0 24 0.00053 36.8 1.8 43 247-290 313-361 (378)
56 COG3751 EGL-9 Predicted prolin 33.2 1.1E+02 0.0023 30.6 6.1 86 250-339 137-235 (252)
57 PF05721 PhyH: Phytanoyl-CoA d 25.1 84 0.0018 28.0 3.6 25 144-168 4-28 (211)
58 PF08372 PRT_C: Plant phosphor 23.4 39 0.00086 31.3 1.1 23 55-77 23-45 (156)
59 PF08943 CsiD: CsiD; InterPro 20.6 69 0.0015 32.3 2.2 27 300-329 251-277 (297)
No 1
>KOG4176 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=3.9e-39 Score=321.64 Aligned_cols=239 Identities=43% Similarity=0.738 Sum_probs=220.4
Q ss_pred cCCCCCChhhhhcce-eeeeccCccchhhhcccCeeeecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeee
Q 014257 105 VQKPMLSREEREHMR-FMHVRRKKDFICLEKIKGKIVNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYS 183 (428)
Q Consensus 105 ~~~~~l~~~~~e~~r-~~~vk~~k~F~~~e~v~g~~vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~ 183 (428)
.....+++++++..+ ...++..+.|.+.|...+..++.+.|+.++++.+++.|+..|.+.|.++..++..+.+.+.+++
T Consensus 76 ~~~~~~~e~~~~~~~~~~~~~~i~~f~~~e~~~~~~~n~~~~~~l~~~~~~~~e~~~~~d~V~el~e~~l~~~~~~e~~~ 155 (323)
T KOG4176|consen 76 LFRELYSEESRLRYRTDANLKAIKGFGEQEQLKGQSVNVVEGLKLRDEVFIPGELSLIVDFVTELEEKGLIGALVDETFT 155 (323)
T ss_pred hhhhhchhhhhhhhhhhccccccccccceeeccchhhhhhhhheeeccccChhhceehhhhhhhhHHhhhhcccccccce
Confidence 345567888999998 7889999999999999999999999999999999999999999999998888888888777776
Q ss_pred CCCceecCCCcEEEEcCCccccCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCC
Q 014257 184 APKKWMRGKGRITIQFGCCYNYATDKNGNPPGILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIP 263 (428)
Q Consensus 184 ~~~kW~~~k~Rrv~~fG~~y~Y~~~~~~~~p~~~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~ 263 (428)
. |+++++|+++|||++|.|.+++++.. .+++|||+.++.+++|++.+.+||+ .||||+||+|++|++|+
T Consensus 156 ~---~~~gk~R~~iq~G~~f~y~~~~~d~~------~~~~piPs~~~~ii~rlv~~~~ip~--~pd~~~iN~Ye~G~~i~ 224 (323)
T KOG4176|consen 156 Y---QESGKHREVIQLGYPFDYRTNNVDES------KPVDPIPSLFKSIIDRLVSWRVIPE--RPDQCTINFYEPGDGIP 224 (323)
T ss_pred e---eccccceeeeecCceeccCCCccccc------CccCCCchHHHHHHHHhhhhccCCC--CCCeeEEEeeCCCCCCC
Confidence 5 88899999999999999999877633 3388999999999999999999997 79999999999999999
Q ss_pred CCCCCCCCCCCEEEEecCCcceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccccccccccCCCCCCeEEEEeeec
Q 014257 264 PHIDNHDFVRPFCTVSFLSECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAVPTKRISITFRKM 343 (428)
Q Consensus 264 pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~r~~RISLTFR~v 343 (428)
||+|++.|++||++|||.|+|+|.|++.+..+..+.+.+...+.|+.|+++||.|.+....+|++...+.+|||||||++
T Consensus 225 ph~~~~~F~~Pi~slS~lSe~~m~Fg~~~~~~~~~~~~g~~s~p~~~g~~lvi~~~~ad~~~~~~~~~~~kRisitfrki 304 (323)
T KOG4176|consen 225 PHIDHSAFLDPISSLSFLSECTMEFGHGLLSDNIGNFRGSLSLPLRYGSVLVIRGRSADVAPHCIRPSRNKRISITFRKI 304 (323)
T ss_pred CCCChHHhcCceEEEEeecceeEEecccccccCccccccccccccccCeEEEeCCCcccccccccCCCCCceEEEEEEEe
Confidence 99977779999999999999999999998887777788899999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCC
Q 014257 344 DESKRPFGFVP 354 (428)
Q Consensus 344 ~~~~c~c~~~~ 354 (428)
++.+|+|++++
T Consensus 305 ~~~~~~~~~~~ 315 (323)
T KOG4176|consen 305 RPDPCFCEPPP 315 (323)
T ss_pred ccCCCCCCCCC
Confidence 99999999977
No 2
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=100.00 E-value=1.2e-33 Score=261.55 Aligned_cols=182 Identities=29% Similarity=0.509 Sum_probs=123.3
Q ss_pred ceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEEEEcCCccccCCCCCCCCCCCCCCCCCCC
Q 014257 145 GLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYNYATDKNGNPPGILQNEPVDP 224 (428)
Q Consensus 145 GL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG~~y~Y~~~~~~~~p~~~~~~~~~p 224 (428)
||+|++||||++|+.+|++.+.+..............+.....++ +.......|..|.|+.... ....++.+
T Consensus 1 G~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~y~y~~~~~------~~~~~~~~ 72 (194)
T PF13532_consen 1 GLYYIPNFLSEEEAAELLNELRESAPFRQPTYPMGKVYSLPRKLC--GGLSWVGDGPSYRYSGKRP------VRSKPWPP 72 (194)
T ss_dssp -EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCCCCECCECCE-S--SEEEEEECT--CCCTCC-E------ECCCEBSC
T ss_pred CEEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcCCCEEccceecc--eeeEEECCCCCeEcCCccc------cCCCCCCC
Confidence 899999999999999999999854321111111222222222222 1122333456777765411 12456789
Q ss_pred CcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC--CCCCEEEEecCCcceeeeeccccccCCCCCCc
Q 014257 225 LPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD--FVRPFCTVSFLSECNIVFGSNLKVVGAGEFAG 302 (428)
Q Consensus 225 iP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~--f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~~~ 302 (428)
+|++|..+++++.+...++....||+|+||+|.+|++|++|+|... ++.+|++||||++++|.|++. +..+.
T Consensus 73 ~p~~l~~~~~~~~~~~~~~~~~~~n~~liN~Y~~g~~i~~H~D~~~~~~~~~I~slSLG~~~~~~f~~~------~~~~~ 146 (194)
T PF13532_consen 73 FPEWLSRLLERLVEATGIPPGWRPNQCLINYYRDGSGIGPHSDDEEYGFGPPIASLSLGSSRVFRFRNK------SDDDE 146 (194)
T ss_dssp CHHHHHHHHHHHHHHHT-SHSS--SEEEEEEESSTT-EEEE---TTC-CCSEEEEEEEES-EEEEEEEC------GGTS-
T ss_pred ccHHHHHHHHHHHHHhccccCCCCCEEEEEecCCCCCcCCCCCcccccCCCcEEEEEEccCceEEEeec------cCCCc
Confidence 9999999999998765433457899999999999999999999985 689999999999999999963 34568
Q ss_pred cEEEEcCCCcEEEeccccccccccccCCCCC----------CeEEEEee
Q 014257 303 SIPIALPVGSVLVLNGNAADVAKHCVPAVPT----------KRISITFR 341 (428)
Q Consensus 303 ~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~r~----------~RISLTFR 341 (428)
.+.|.|++||||||+|++|+.| |+|++... .|||||||
T Consensus 147 ~~~~~L~~gsl~vm~g~~r~~~-H~I~~~~~~~~~~~~~~~~RislTfR 194 (194)
T PF13532_consen 147 PIEVPLPPGSLLVMSGEARYDW-HGIPPVKKDTHPSHYVRGRRISLTFR 194 (194)
T ss_dssp EEEEEE-TTEEEEEETTHHHHE-EEE-S-SCEEEESTEE-S-EEEEEEE
T ss_pred cEEEEcCCCCEEEeChHHhhhe-eEcccccCCccccccCCCCEEEEEeC
Confidence 9999999999999999999999 99998544 89999999
No 3
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=99.97 E-value=2.7e-29 Score=238.73 Aligned_cols=182 Identities=23% Similarity=0.307 Sum_probs=135.3
Q ss_pred eecCCceEEEcCCCCHHHHHHHHHHHHhhhhcccccccc-ceeeeCCCceecCCCcEE-----EEcC--CccccCCCCCC
Q 014257 140 VNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELK-EKTYSAPKKWMRGKGRIT-----IQFG--CCYNYATDKNG 211 (428)
Q Consensus 140 vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~-~~t~~~~~kW~~~k~Rrv-----~~fG--~~y~Y~~~~~~ 211 (428)
..+.+|..++++|. .+++++|++.|.+...... +. ..++ .++.|. -|.+ .++| ..|.|+....
T Consensus 14 ~~~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~p---~~~~~~~--gg~~ms--v~mt~~G~~~W~~d~~~YrYs~~~~- 84 (213)
T PRK15401 14 EPLAPGAVLLRGFA-LAAAEALLAAIEAVAAQAP---FRHMVTP--GGYTMS--VAMTNCGALGWVTDRRGYRYSPIDP- 84 (213)
T ss_pred eecCCCcEEeCCCC-HHHHHHHHHHHHHHHhcCC---ccceecC--CCCcce--eEEeccccceEecCCCCcccCCcCC-
Confidence 34689999999994 8999999999987543221 11 1111 122221 2333 2332 3567764310
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC--CCCCEEEEecCCcceeeee
Q 014257 212 NPPGILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD--FVRPFCTVSFLSECNIVFG 289 (428)
Q Consensus 212 ~~p~~~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~--f~~pI~SLSLGS~~vm~F~ 289 (428)
....+..+||++|..|.+++.....++ .+.||+||||+|.+|++|++|+|..+ |+.+|+|||||++|+|.|+
T Consensus 85 -----~~~~pwp~~P~~l~~L~~~~~~~~~~~-~~~p~a~LvN~Y~~G~~mg~H~D~~E~~~~~pI~SvSLG~~~~F~~~ 158 (213)
T PRK15401 85 -----LTGKPWPAMPASFLALAQRAAAAAGFP-GFQPDACLINRYAPGAKLSLHQDKDERDFRAPIVSVSLGLPAVFQFG 158 (213)
T ss_pred -----CCCCCCCCchHHHHHHHHHHHHHcCCC-CCCCCEEEEEeccCcCccccccCCCcccCCCCEEEEeCCCCeEEEec
Confidence 023567889999999999997665443 47899999999999999999999754 8899999999999999999
Q ss_pred ccccccCCCCCCccEEEEcCCCcEEEeccccccccccccCCCC--------CCeEEEEeeec
Q 014257 290 SNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAVP--------TKRISITFRKM 343 (428)
Q Consensus 290 ~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~r--------~~RISLTFR~v 343 (428)
+. ...+...+|.|++||||||.|++|+ |.|+|++.+ ..|||||||++
T Consensus 159 ~~------~~~~~~~~l~L~~Gdllvm~G~sr~-~~HgVp~~~~~~~p~~g~~RINLTFR~~ 213 (213)
T PRK15401 159 GL------KRSDPLQRILLEHGDVVVWGGPSRL-RYHGILPLKAGEHPLTGECRINLTFRKA 213 (213)
T ss_pred cc------CCCCceEEEEeCCCCEEEECchHhh-eeccCCcCCCCcCCCCCCCeEEEEeEcC
Confidence 63 2344578999999999999999998 559999853 37999999975
No 4
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.94 E-value=2.5e-26 Score=209.41 Aligned_cols=177 Identities=19% Similarity=0.248 Sum_probs=146.1
Q ss_pred eecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEEEEcCCccccCCCCCCCCCCCCCC
Q 014257 140 VNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYNYATDKNGNPPGILQN 219 (428)
Q Consensus 140 vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG~~y~Y~~~~~~~~p~~~~~ 219 (428)
|..-|-+.||||||+++||.++++.|...+ ..||-..+.||.+.||.-..-. |
T Consensus 8 V~~~pt~~YIPnfIt~EEe~~~lshIe~ap---------------~pkW~~L~NRRLqNyGGvvh~~--------g---- 60 (224)
T KOG3200|consen 8 VKSAPTMIYIPNFITEEEENLYLSHIENAP---------------QPKWRVLANRRLQNYGGVVHKT--------G---- 60 (224)
T ss_pred ecccceEEEcCCccChHHHHHHHHHHhcCC---------------CchhHHHHhhhhhhcCCccccC--------C----
Confidence 334567899999999999999999997644 2567777889999999643211 1
Q ss_pred CCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCCCCCCEEEEecCCcceeeeeccccccC---
Q 014257 220 EPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVVG--- 296 (428)
Q Consensus 220 ~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~~--- 296 (428)
--.+.||+||+.+++++...|+|+. ..|+++||+|.||+||.||.|.+.|-+.|.+|||||.|+|+|......+.
T Consensus 61 lipeelP~wLq~~v~kinnlglF~s--~~NHVLVNeY~pgqGImPHtDGPaf~piVstiSlGsh~vldf~~p~r~e~~d~ 138 (224)
T KOG3200|consen 61 LIPEELPPWLQYYVDKINNLGLFKS--PANHVLVNEYLPGQGIMPHTDGPAFHPIVSTISLGSHTVLDFYDPVRQEVNDG 138 (224)
T ss_pred cCccccCHHHHHHHHHhhcccccCC--CcceeEeecccCCCCcCcCCCCCcccceEEEEecCCceEEecccccccccCCc
Confidence 1237899999999999999999974 88999999999999999999999999999999999999999987432221
Q ss_pred --CC--CCCccEEEEcCCCcEEEeccccccccccccCC-------------------------CCCCeEEEEeeeccC
Q 014257 297 --AG--EFAGSIPIALPVGSVLVLNGNAADVAKHCVPA-------------------------VPTKRISITFRKMDE 345 (428)
Q Consensus 297 --~g--~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~-------------------------~r~~RISLTFR~v~~ 345 (428)
.+ .....+++.|.++||||+.+.+..++.|+|.. .++.|||||+|.|-+
T Consensus 139 te~~dqp~R~~fsllleprslLilkd~aYtd~LHgIs~s~~d~l~~~~sna~ac~s~k~Gd~lvr~tRvSLTiR~VPk 216 (224)
T KOG3200|consen 139 TESKDQPLRYLFSLLLEPRSLLILKDDAYTDFLHGISDSPTDCLNQVVSNALACSSRKDGDKLVRQTRVSLTIRLVPK 216 (224)
T ss_pred cccCCCCccceeeeeeccceEEEEcCcHHHHHHhhcccChHHHHHHHhhhhhhccccCCcceeeecceeEEEEecchH
Confidence 11 13357889999999999999999999999974 389999999998754
No 5
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=99.93 E-value=7.7e-25 Score=202.00 Aligned_cols=159 Identities=19% Similarity=0.288 Sum_probs=118.6
Q ss_pred cCCCCHHHHHHHHHHHHhhhhcc-ccccccceeeeCCCceecCCCcE------EEEcCCccccCCCCCCCCCCCCCCCCC
Q 014257 150 EGIFSAAEQKRIVDFVHTLNEMG-TKGELKEKTYSAPKKWMRGKGRI------TIQFGCCYNYATDKNGNPPGILQNEPV 222 (428)
Q Consensus 150 ~~FIS~eEe~~Ll~~I~e~~~~~-~~~~L~~~t~~~~~kW~~~k~Rr------v~~fG~~y~Y~~~~~~~~p~~~~~~~~ 222 (428)
.+|+..+++..|++.+.+..... ++.. ....+|.+.. .|. +..-|+.|+|++.... ...+.
T Consensus 2 ~~~~~~~~~~~l~~~~~~~~~~~~w~~~-----~~~~gk~~~~-pr~~~~~l~W~~~g~~Y~ys~~~~~------~~~~~ 69 (169)
T TIGR00568 2 KRYFAFNAQEQLIRDINDVASQDPFRQY-----VTPGGYTMSV-AMTNLGKLGWTTHGQGYLYSPKDPQ------TNKPW 69 (169)
T ss_pred CCccChHHHHHHHHHHHHHhhcCCCcCe-----EecCCeEeee-hhhhcccceEEcCCCcccCCCcccC------CCCCC
Confidence 57899999999999988654322 2111 1122333321 122 2333789999876331 23455
Q ss_pred CCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC--CCCCEEEEecCCcceeeeeccccccCCCCC
Q 014257 223 DPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD--FVRPFCTVSFLSECNIVFGSNLKVVGAGEF 300 (428)
Q Consensus 223 ~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~--f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~ 300 (428)
.+||++|..|.+++.+...++ ...||+||||+|.+|++|++|+|.++ ++.+|+|||||++|+|.|++. ...
T Consensus 70 p~~P~~L~~L~~~v~~~~g~~-~~~~n~~LvN~Y~~Gd~mg~H~D~~e~~~~~pI~SvSLG~~r~F~~~~~------~~~ 142 (169)
T TIGR00568 70 PAMPQDLGDLCERVATAAGFP-DFQPDACLVNRYAPGATLSLHQDRDEPDLRAPLLSVSLGLPAIFLIGGL------KRN 142 (169)
T ss_pred CCCCHHHHHHHHHHHHHhCCC-CCCCCEEEEEeecCCCccccccccccccCCCCEEEEeCCCCEEEEecCC------cCC
Confidence 679999999999997655443 46899999999999999999999756 568999999999999999974 234
Q ss_pred CccEEEEcCCCcEEEecccccccccccc
Q 014257 301 AGSIPIALPVGSVLVLNGNAADVAKHCV 328 (428)
Q Consensus 301 ~~~~~V~Lp~GSLLVMsGesRy~wkH~I 328 (428)
+.+.+|.|++||||||+|++|+.| |+|
T Consensus 143 ~~~~~l~L~sGsllvM~G~sR~~~-Hgv 169 (169)
T TIGR00568 143 DPPKRLRLHSGDVVIMGGESRLAF-HGV 169 (169)
T ss_pred CceEEEEeCCCCEEEECCchhccc-cCC
Confidence 457899999999999999999854 987
No 6
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=99.87 E-value=1e-21 Score=184.14 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=118.3
Q ss_pred eecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEEEEcCCccc---cCCCCCCCCCCC
Q 014257 140 VNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYN---YATDKNGNPPGI 216 (428)
Q Consensus 140 vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG~~y~---Y~~~~~~~~p~~ 216 (428)
..+.+|+.+.++|+ -.++.++++.|..+.... .+....+...+++|... | .+|+.++ |......+.+
T Consensus 11 ~~~~~G~~~~~~~~-~~~~~~l~~~l~~~~~~~---P~~~~~~~~~g~~~sV~-r---~~~W~~d~~gy~y~~~~p~~-- 80 (194)
T COG3145 11 RQLAPGAVILPGFL-LLTQGALVAALLFLLSQA---PWFRPRRTPYGKPMSVP-R---LLGWVTDRRGYRYSLRSPLT-- 80 (194)
T ss_pred ccCCCCeEEEeccc-ccchHHHHHHHHHhcccC---cccceeecCCCcEeeee-e---ccceecccccccccccccCC--
Confidence 34589999999999 666777777665432211 12223333445666421 2 5555444 3222111111
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCCCC--CCEEEEecCCcceeeeeccccc
Q 014257 217 LQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFV--RPFCTVSFLSECNIVFGSNLKV 294 (428)
Q Consensus 217 ~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~f~--~pI~SLSLGS~~vm~F~~~~~~ 294 (428)
..+..+||..+..+. .+.+. + ...||+|+||+|.+|++|+||+|...++ .+|+|||||++|+|.|++.
T Consensus 81 --~~p~p~l~~~~~~~~---~~~g~-~-~~~~ea~Lvn~Y~pGd~ig~HqD~~e~~~~~~v~slSLg~~~~F~~~~~--- 150 (194)
T COG3145 81 --GKPWPPLLALFHDLF---GAAGY-P-FEGPEAVLVNRYRPGASIGWHQDKDEEDDRPPVASLSLGAPCIFRLRGR--- 150 (194)
T ss_pred --CCCCCccHHHHHHHH---HHhcC-C-CCChhheeEEeccCCCccccccccccccCCCceEEEecCCCeEEEeccc---
Confidence 112233334333333 23343 2 4688999999999999999999998843 5799999999999999985
Q ss_pred cCCCCCCccEEEEcCCCcEEEeccccccccccccCCC---CCCeEEE
Q 014257 295 VGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAV---PTKRISI 338 (428)
Q Consensus 295 ~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~---r~~RISL 338 (428)
+..+...++.|.+||||||.|.+|+.|.|.||+. ...||||
T Consensus 151 ---~r~~~~~~~~L~~Gdvvvm~G~~r~~~~h~~p~~~~~~~~Rinl 194 (194)
T COG3145 151 ---RRRGPGLRLRLEHGDVVVMGGPSRLAWHHIIPKTSRLTGQRINL 194 (194)
T ss_pred ---cCCCCceeEEecCCCEEEecCCccccccccccccccCCcccccC
Confidence 3456899999999999999999999999999974 3356654
No 7
>KOG3959 consensus 2-Oxoglutarate- and iron-dependent dioxygenase-related proteins [General function prediction only]
Probab=99.82 E-value=4.5e-21 Score=182.12 Aligned_cols=184 Identities=23% Similarity=0.335 Sum_probs=147.7
Q ss_pred CCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEEEEcCCccccCCCCCCCCCCCCCCCCC
Q 014257 143 LAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYNYATDKNGNPPGILQNEPV 222 (428)
Q Consensus 143 ~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG~~y~Y~~~~~~~~p~~~~~~~~ 222 (428)
+|||.|++||+|.+|+.+|+..|+.++|.. ...+||.+.||...||..++.. ....
T Consensus 71 ~pG~~lie~Fls~~Eea~l~~~~D~~pW~~-----------------SQSGRRKQdyGPKvNFkk~Klk-------t~~F 126 (306)
T KOG3959|consen 71 IPGLTLIENFLSESEEAKLLNMIDTVPWAQ-----------------SQSGRRKQDYGPKVNFKKKKLK-------TDTF 126 (306)
T ss_pred cCCeeehhhhhccchHhHHHHHhccCchhh-----------------hcccccccccCCccchhhhhhc-------cCcc
Confidence 799999999999999999999999888642 1258999999999999877653 4566
Q ss_pred CCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCC--CCCCCCCCCCCC-CCCCEEEEecCCcceeeeecccccc----
Q 014257 223 DPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEE--GDCIPPHIDNHD-FVRPFCTVSFLSECNIVFGSNLKVV---- 295 (428)
Q Consensus 223 ~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~p--G~gI~pHvD~~~-f~~pI~SLSLGS~~vm~F~~~~~~~---- 295 (428)
..+|..-..+++||....++-....+.||-+ +|+| |..|.||+|+.+ +|..++++.+.++.++.+-.+.-..
T Consensus 127 ~G~P~~~~~v~rrm~~yp~l~gfqp~EqCnL-eYep~kgsaIdpH~DD~WiWGeRlv~~n~l~d~vl~lc~~e~~~sg~~ 205 (306)
T KOG3959|consen 127 VGMPEYADMVLRRMSEYPVLKGFQPFEQCNL-EYEPVKGSAIDPHQDDMWIWGERLVRSNRLFDFVLKLCSKECLASGII 205 (306)
T ss_pred cCCchHHHHHHHHhhccchhhccCcHHHcCc-ccccccCCccCccccchhhhhhheeehhhccHHHHHhhhhhhhcccee
Confidence 8999999999999987766654457889988 6765 678999999999 9999999998888887776321110
Q ss_pred -------------CC----C-----CCCccEEEEcCCCcEEEeccccccccccccCC--CCCCeEEEEeeeccCCCCCCC
Q 014257 296 -------------GA----G-----EFAGSIPIALPVGSVLVLNGNAADVAKHCVPA--VPTKRISITFRKMDESKRPFG 351 (428)
Q Consensus 296 -------------~~----g-----~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~--~r~~RISLTFR~v~~~~c~c~ 351 (428)
.+ + ..+-...|++|.+|||||.|+|||.|+|+|-. ++++||.+|||...+..-+.+
T Consensus 206 nL~~~~s~~~e~l~~~li~~s~~~l~~~~~~~ipmP~rSLlvl~g~aRyqwkH~vlr~hi~~RRvcvt~RE~~~~f~~Gg 285 (306)
T KOG3959|consen 206 NLNTNFSESNEFLSINLINGSVMTLNKSFLCYIPMPHRSLLVLAGEARYQWKHGVLRHHIRGRRVCVTMREAAKDFAEGG 285 (306)
T ss_pred eeccCccccccccchhhcccchhhhccceEEEeecCcceeEEeechhHhhHHHHHHHHhhhhceeeeeHHhhhHhhccch
Confidence 00 0 12346779999999999999999999999986 799999999999877544433
No 8
>KOG2731 consensus DNA alkylation damage repair protein [RNA processing and modification]
Probab=98.41 E-value=2.9e-07 Score=93.07 Aligned_cols=126 Identities=16% Similarity=0.237 Sum_probs=90.1
Q ss_pred CcEEEEcCCccccCCCCCCCCCCCCCCCCCCCCcHHHHH-HHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC-
Q 014257 193 GRITIQFGCCYNYATDKNGNPPGILQNEPVDPLPHLFKV-IIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD- 270 (428)
Q Consensus 193 ~Rrv~~fG~~y~Y~~~~~~~~p~~~~~~~~~piP~~L~~-Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~- 270 (428)
+-|++..|..|++.+.. ++ +.-......+|++|.. +.++......+-....+..+|+|+|.+++.++.|.|-.+
T Consensus 164 KlRw~T~G~~~dw~s~~---~~-~~~s~k~~~~~~~ll~~~~~~~~~a~~~~~~~~~~Gli~nYlsi~~tl~ih~d~rel 239 (378)
T KOG2731|consen 164 KLRWVTLGNQYDWSSKD---IF-IFLSKKHYNIKPSLLGLLREKVKAAKGFSHIVIRPGLIKNYLSIDDTLGIHLDCREL 239 (378)
T ss_pred hhcccccccccCCcccc---cc-ccccccCCCCChHHhhhhhhhhhhhcCccceeccCcceeeecccCcEEEEEeehhhc
Confidence 34677779888888763 11 1112233345555544 444443333332334556699999999999999999977
Q ss_pred -CCCCEEEEecCCcceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccccccccccC
Q 014257 271 -FVRPFCTVSFLSECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVP 329 (428)
Q Consensus 271 -f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip 329 (428)
...|++++|||..+.+.++-. -..+....+.|..|++++|.|.+|... |+||
T Consensus 240 d~~~pf~s~s~g~~ai~lLg~m------~l~e~p~p~~lrsGdv~im~Gfsrlv~-haIp 292 (378)
T KOG2731|consen 240 DLSKPFYSPSLGQGAILLLGMM------CLGENPDPMTLRSGDVVIMDGFSRLVE-HAIP 292 (378)
T ss_pred ccCCccccccccccceeeeccc------ccCCCCCccccccCceEeecchHHHHh-hccc
Confidence 667899999999999999853 123568889999999999999999765 9988
No 9
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=97.83 E-value=1e-05 Score=66.99 Aligned_cols=83 Identities=24% Similarity=0.327 Sum_probs=48.5
Q ss_pred CCEEEEeecC---CCCCCCCCCCCCCCCCCEEEEecC-CcceeeeeccccccCCCCCCccEEEEcCCCcEEEeccc----
Q 014257 248 PDSCIVNIYE---EGDCIPPHIDNHDFVRPFCTVSFL-SECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGN---- 319 (428)
Q Consensus 248 PDq~iVN~Y~---pG~gI~pHvD~~~f~~pI~SLSLG-S~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGe---- 319 (428)
++++.||+|. .+.++++|.|.. +.+++|.+. ....+.|... +..+.+...++.++|+-|+
T Consensus 1 ~~~~~~~~Y~~~~~~~~~~~H~D~~---~~~~Til~~~~~~gL~~~~~---------~~~~~v~~~~~~~~v~~G~~l~~ 68 (98)
T PF03171_consen 1 PSQLRLNRYPPPENGVGIGPHTDDE---DGLLTILFQDEVGGLQVRDD---------GEWVDVPPPPGGFIVNFGDALEI 68 (98)
T ss_dssp --EEEEEEE-SCCGCEEEEEEEES-----SSEEEEEETSTS-EEEEET---------TEEEE----TTCEEEEEBHHHHH
T ss_pred CCEEEEEECCCcccCCceeCCCcCC---CCeEEEEecccchheecccc---------ccccCccCccceeeeeceeeeec
Confidence 4789999999 677999999995 346666554 6677777752 1344555555555555555
Q ss_pred ----cccccccccCCC-CCCeEEEEeee
Q 014257 320 ----AADVAKHCVPAV-PTKRISITFRK 342 (428)
Q Consensus 320 ----sRy~wkH~Ip~~-r~~RISLTFR~ 342 (428)
.+..+.|.|.+. .+.|+|+||+.
T Consensus 69 ~t~g~~~~~~HrV~~~~~~~R~s~~~f~ 96 (98)
T PF03171_consen 69 LTNGRYPATLHRVVPPTEGERYSLTFFL 96 (98)
T ss_dssp HTTTSS----EEEE--STS-EEEEEEEE
T ss_pred ccCCccCCceeeeEcCCCCCEEEEEEEE
Confidence 778889998876 59999999973
No 10
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=97.65 E-value=0.00058 Score=66.30 Aligned_cols=79 Identities=25% Similarity=0.344 Sum_probs=53.3
Q ss_pred EEEEeecCCCCCCCCCCCCCCC---C-----CCEEEEe-cCCcc------eeeeeccccccCCCCCCccEEEEcCCCcEE
Q 014257 250 SCIVNIYEEGDCIPPHIDNHDF---V-----RPFCTVS-FLSEC------NIVFGSNLKVVGAGEFAGSIPIALPVGSVL 314 (428)
Q Consensus 250 q~iVN~Y~pG~gI~pHvD~~~f---~-----~pI~SLS-LGS~~------vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLL 314 (428)
-..+|.|.+|+.-++|+|.... + ...+|+. ++++. .+.|. ...+...|.++.|+++
T Consensus 81 ~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~---------~~~g~~~Vkp~aG~~v 151 (226)
T PRK05467 81 PPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIE---------DTYGEHRVKLPAGDLV 151 (226)
T ss_pred cceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEe---------cCCCcEEEecCCCeEE
Confidence 5679999999999999999652 1 1122221 11211 11111 1224578999999999
Q ss_pred EeccccccccccccCC-CCCCeEEEEee
Q 014257 315 VLNGNAADVAKHCVPA-VPTKRISITFR 341 (428)
Q Consensus 315 VMsGesRy~wkH~Ip~-~r~~RISLTFR 341 (428)
|+... ..|.+.+ .++.|+++|+.
T Consensus 152 lfps~----~lH~v~pVt~G~R~~~~~W 175 (226)
T PRK05467 152 LYPST----SLHRVTPVTRGVRVASFFW 175 (226)
T ss_pred EECCC----CceeeeeccCccEEEEEec
Confidence 99974 3598887 69999999984
No 11
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=97.48 E-value=0.0063 Score=55.79 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=89.6
Q ss_pred CceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEEEEcCCccccCCCCCCCCCCCCCCCCCC
Q 014257 144 AGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYNYATDKNGNPPGILQNEPVD 223 (428)
Q Consensus 144 pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG~~y~Y~~~~~~~~p~~~~~~~~~ 223 (428)
|++.++++|||++|.+.|++....... ...+.. ...+--..+..|... +. .....
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~---~~~~~~----~~~~~~~~~~~R~~~-~~-----------------~l~~~ 55 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGW---RGEVTR----GDTNPNHDSKYRQSN-GT-----------------WLELL 55 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcc---cceeec----CCCCccccCCCEeec-ce-----------------ecCCC
Confidence 678999999999999999998865321 111100 000000000011110 00 00000
Q ss_pred CCcHHHHHHHHHHHHccCCCC--CCCCCEEEEeecCCCCCCCCCCCCCCC---CCCEEEEecC-Cc----ceeeeecccc
Q 014257 224 PLPHLFKVIIRRLVKWHVLPP--TCVPDSCIVNIYEEGDCIPPHIDNHDF---VRPFCTVSFL-SE----CNIVFGSNLK 293 (428)
Q Consensus 224 piP~~L~~Li~Rl~~~~iip~--~~~PDq~iVN~Y~pG~gI~pHvD~~~f---~~pI~SLSLG-S~----~vm~F~~~~~ 293 (428)
.-++....|.+|+...-.++. ......+.|..|.+|+...+|.|.... +..++++-|= ++ -.+.|-.
T Consensus 56 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~Y~~g~~~~~H~D~~~~~~~~~r~~T~~~yLn~~~~GG~~~f~~--- 132 (178)
T smart00702 56 KGDLVIERIRQRLADFLGLLRGLPLSAEDAQVARYGPGGHYGPHVDNFEDDENGDRIATFLLYLNDVEEGGELVFPG--- 132 (178)
T ss_pred CCCHHHHHHHHHHHHHHCCCchhhccCcceEEEEECCCCcccCcCCCCCCCCCCCeEEEEEEEeccCCcCceEEecC---
Confidence 012344556666554433320 234578899999999999999999652 1344444221 11 0111211
Q ss_pred ccCCCCCCccEEEEcCCCcEEEeccccccccccccCCC-CCCeEEEEee
Q 014257 294 VVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAV-PTKRISITFR 341 (428)
Q Consensus 294 ~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~-r~~RISLTFR 341 (428)
........|.-..|++|++...-. ...|++.++ .+.|+++|..
T Consensus 133 ----~~~~~~~~v~P~~G~~v~f~~~~~-~~~H~v~pv~~G~r~~~~~W 176 (178)
T smart00702 133 ----LGLMVCATVKPKKGDLLFFPSGRG-RSLHGVCPVTRGSRWAITGW 176 (178)
T ss_pred ----CCCccceEEeCCCCcEEEEeCCCC-CccccCCcceeCCEEEEEEE
Confidence 001234578888999999875321 345998885 5899999874
No 12
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=96.27 E-value=0.0034 Score=51.98 Aligned_cols=83 Identities=23% Similarity=0.225 Sum_probs=50.5
Q ss_pred EEEeecCCCCCCCCCCCCCCCCCCEEEEe--cCCc------ceeeeeccccccCCCCCCccEEEE-----cCCCcEEEec
Q 014257 251 CIVNIYEEGDCIPPHIDNHDFVRPFCTVS--FLSE------CNIVFGSNLKVVGAGEFAGSIPIA-----LPVGSVLVLN 317 (428)
Q Consensus 251 ~iVN~Y~pG~gI~pHvD~~~f~~pI~SLS--LGS~------~vm~F~~~~~~~~~g~~~~~~~V~-----Lp~GSLLVMs 317 (428)
|-|+.|.+|+.+.||.|.......++++- |..+ -.+.|.... . .......+. ..+|+++++.
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~----~~~~~~~~~~~~~~p~~g~~v~F~ 75 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSYDPHRRVTLLLYLNDPEWEFEGGELEFYPSK-D----SDDVSREVEDFDIVPKPGRLVIFP 75 (100)
T ss_dssp -EEEEEETTEEEEEEESSSCCCSEEEEEEEESS-CS-HCEE--EEETTTS------TSSTCEEEGGGSEE-BTTEEEEEE
T ss_pred CEEEEECcCCEEeeeECCCCCCcceEEEEEEECCCCcccCCCEEEEeccc-c----CCCcceEEEeccccCCCCEEEEEe
Confidence 46899999999999999943222222222 3311 234444310 0 112233333 8899999999
Q ss_pred cccccccccccCCC--CCCeEEEEee
Q 014257 318 GNAADVAKHCVPAV--PTKRISITFR 341 (428)
Q Consensus 318 GesRy~wkH~Ip~~--r~~RISLTFR 341 (428)
+ ....|+|.++ .++|++||+-
T Consensus 76 ~---~~~~H~v~~v~~~~~R~~l~~~ 98 (100)
T PF13640_consen 76 S---DNSLHGVTPVGEGGRRYSLTFW 98 (100)
T ss_dssp S---CTCEEEEEEE-EESEEEEEEEE
T ss_pred C---CCCeecCcccCCCCCEEEEEEE
Confidence 9 4445998876 8999999973
No 13
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=96.19 E-value=0.24 Score=50.41 Aligned_cols=172 Identities=15% Similarity=0.160 Sum_probs=94.5
Q ss_pred eeecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCC--CceecCCCcEEEEcCCccccCCCCCCCCCCC
Q 014257 139 IVNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAP--KKWMRGKGRITIQFGCCYNYATDKNGNPPGI 216 (428)
Q Consensus 139 ~vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~--~kW~~~k~Rrv~~fG~~y~Y~~~~~~~~p~~ 216 (428)
.++.-|-+++|+||||++|.+.|++..... ++..+.... ++-.. ...|+.. |.-+.
T Consensus 49 ~lS~~P~i~~~~nfLs~~Ecd~Li~la~~~--------l~~S~v~~~~~g~~~~-s~~RTS~-~~~l~------------ 106 (310)
T PLN00052 49 AVSWQPRIFVYKGFLSDAECDHLVKLAKKK--------IQRSMVADNKSGKSVM-SEVRTSS-GMFLD------------ 106 (310)
T ss_pred EecCCCCEEEECCcCCHHHHHHHHHhcccc--------cccceeecCCCCcccc-CCCEEec-ceeec------------
Confidence 355678999999999999999999876531 111111100 00000 0111111 11000
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC-------CCCCEEEEe-------cCC
Q 014257 217 LQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD-------FVRPFCTVS-------FLS 282 (428)
Q Consensus 217 ~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~-------f~~pI~SLS-------LGS 282 (428)
. .--+.+..|.+|+..+..+|.. .-..+-|-.|.+|+...+|.|... -++.+++|- .|.
T Consensus 107 ---~---~~dpvv~~I~~Ria~~t~lp~~-~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GG 179 (310)
T PLN00052 107 ---K---RQDPVVSRIEERIAAWTFLPEE-NAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGG 179 (310)
T ss_pred ---C---CCCHHHHHHHHHHHHHhCCCcc-cCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEeccCCCCC
Confidence 0 0024678888899888777642 335677788999999999999632 134455542 233
Q ss_pred cceeeeeccccccCCCC------CCccEEEEcCCCcEEEecc-----ccccccccccCC-CCCCeEEEEe
Q 014257 283 ECNIVFGSNLKVVGAGE------FAGSIPIALPVGSVLVLNG-----NAADVAKHCVPA-VPTKRISITF 340 (428)
Q Consensus 283 ~~vm~F~~~~~~~~~g~------~~~~~~V~Lp~GSLLVMsG-----esRy~wkH~Ip~-~r~~RISLTF 340 (428)
.++|-..... ...+.. ....+.|.=..|+.|++-- ..-..-.|+.-+ ..+.++.+|.
T Consensus 180 eT~FP~~~~~-~~~~~~~~~s~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atk 248 (310)
T PLN00052 180 ETVFPNAEGW-ENQPKDDTFSECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPK 248 (310)
T ss_pred ceecCCcccc-cccccccchhhhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEE
Confidence 3333211000 000000 0124677778899988753 222233577655 5788999993
No 14
>PF12933 FTO_NTD: FTO catalytic domain; InterPro: IPR024367 Alpha-ketoglutarate-dependent dioxygenase FTO, also known as Fat mass and obesity-associated protein, is a nucleus protein which belongs to the FTO family. This enzyme is a dioxygenase that repairs alkylated DNA and RNA by oxidative demethylation []. FTO activity is highest towards single-stranded RNA containing 3-methyluracil, followed by single-stranded DNA containing 3-methylthymine. FTO has low demethylase activity towards single-stranded DNA containing 1-methyladenine or 3-methylcytosine []. FTO has no activity towards 1-methylguanine. It has no detectable activity towards double-stranded DNA. FTO requires molecular oxygen, alpha-ketoglutarate and iron. FTO contributes to the regulation of the global metabolic rate, energy expenditure and energy homeostasis. It contributes to the regulation of body size and body fat accumulation as well []. This domain is the catalytic AlkB-like domain from the FTO protein []. This domain catalyses a demethylase activity with a preference for 3-methylthymidine.; PDB: 3LFM_A.
Probab=94.86 E-value=0.035 Score=54.38 Aligned_cols=92 Identities=16% Similarity=0.200 Sum_probs=48.9
Q ss_pred CCCCCEEEEeecCC--C------------C---CCCCCCCCCCCC-CC--EEEEecCC--cce--eeeeccccccCCCCC
Q 014257 245 TCVPDSCIVNIYEE--G------------D---CIPPHIDNHDFV-RP--FCTVSFLS--ECN--IVFGSNLKVVGAGEF 300 (428)
Q Consensus 245 ~~~PDq~iVN~Y~p--G------------~---gI~pHvD~~~f~-~p--I~SLSLGS--~~v--m~F~~~~~~~~~g~~ 300 (428)
.+.+|.++||+++| . . .++||.|..--+ .+ |++-|-.. +.. .-|+. ..-.
T Consensus 135 ~~~fNvTLlN~MdP~~~~~~~LK~Ep~fgmGKmaVsWH~DenL~~~StVAVY~~s~~~~~~~~W~VgLka------~D~~ 208 (253)
T PF12933_consen 135 SCEFNVTLLNYMDPSSQAMPDLKEEPYFGMGKMAVSWHHDENLVERSTVAVYSYSCEEPEPADWHVGLKA------WDIE 208 (253)
T ss_dssp -----EEEEEEE-S--S-SSS--B-SSS---BEEEEEE---SB-TT--EEEEEEE-----TTSEEEEEET------T--S
T ss_pred ceeeehhhhhccCcccccccccccccccCCcceeeeeccccccccccceEEEEecCCCCCCCceEEEEee------cCCC
Confidence 46799999999998 1 1 267888885422 23 34444421 111 11221 0113
Q ss_pred CccEEEEcCCCcEEEeccccccccccccCCCCCCeEEEEeee
Q 014257 301 AGSIPIALPVGSVLVLNGNAADVAKHCVPAVPTKRISITFRK 342 (428)
Q Consensus 301 ~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~r~~RISLTFR~ 342 (428)
.+.+.|+|++|+++.|-++-....+|||-+-...|+|=|-|-
T Consensus 209 tP~L~vPL~sgd~Y~Mldd~N~tHqH~VlaG~~~RfSSTHRV 250 (253)
T PF12933_consen 209 TPGLAVPLRSGDCYYMLDDFNATHQHCVLAGSSARFSSTHRV 250 (253)
T ss_dssp S-EEEEEE-TT-EEEE-TTHHHHEEEEEE--SS-EEEEEEE-
T ss_pred CCeeEEeccCCCeEEEccccchhhHHHHhcCCCcccccccee
Confidence 368999999999999999999999999999889999999984
No 15
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=94.36 E-value=0.27 Score=45.75 Aligned_cols=83 Identities=22% Similarity=0.272 Sum_probs=54.0
Q ss_pred CCCCEEEEeecCCCCCCCCCCCCCCCC---CCEEEEecC--CcceeeeeccccccCCCCCCccEEEEcCCCcEEEecccc
Q 014257 246 CVPDSCIVNIYEEGDCIPPHIDNHDFV---RPFCTVSFL--SECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNA 320 (428)
Q Consensus 246 ~~PDq~iVN~Y~pG~gI~pHvD~~~f~---~pI~SLSLG--S~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGes 320 (428)
..+..+.|+ ..-..+.|.|.+.+. +.++++-.| ....+.+-.. ...-.-+.|.+.+||+|++.|.
T Consensus 74 ~pFs~~sv~---~nr~t~~HrD~~~~~~~~~~~~t~~~gd~~~g~l~lp~~------~~~~~g~~~~~~~GtVl~~~~~- 143 (171)
T PF12851_consen 74 RPFSGVSVI---SNRCTHSHRDTHNMPNGYDVLCTLGRGDYDGGRLELPGL------DPNILGVAFAYQPGTVLIFCAK- 143 (171)
T ss_pred cceeceEEE---eecCccceecCCCCCCCeEEEEecCCccccCceEecccc------ccccCCEEEecCCCcEEEEccc-
Confidence 345555555 233678999998843 344444333 2233333210 0111578899999999999994
Q ss_pred ccccccccCCCC------CCeEEEEe
Q 014257 321 ADVAKHCVPAVP------TKRISITF 340 (428)
Q Consensus 321 Ry~wkH~Ip~~r------~~RISLTF 340 (428)
...|+++++. +.||||.|
T Consensus 144 --~~~Hgvtpv~~~~~~~~~R~slvf 167 (171)
T PF12851_consen 144 --RELHGVTPVESPNRNHGTRISLVF 167 (171)
T ss_pred --ceeeecCcccCCCCCCCeEEEEEE
Confidence 4679999976 89999998
No 16
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=93.36 E-value=3.3 Score=41.60 Aligned_cols=42 Identities=12% Similarity=0.262 Sum_probs=31.8
Q ss_pred cEEEEcCCCcEEEeccccccccccccCC-C--CCCeEEEEeeeccCCCC
Q 014257 303 SIPIALPVGSVLVLNGNAADVAKHCVPA-V--PTKRISITFRKMDESKR 348 (428)
Q Consensus 303 ~~~V~Lp~GSLLVMsGesRy~wkH~Ip~-~--r~~RISLTFR~v~~~~c 348 (428)
.+.+.|++|++++|.+.. -|+-.+ . ..+|+++++|.+.....
T Consensus 208 ~v~~~lkaGd~~~f~~~t----~HgS~~N~S~~~~R~~~~~ry~~~~~~ 252 (288)
T TIGR01762 208 AVPMQMKAGQFIIFWSTL----MHASYPNSGESQMRMGFASRYVPSFVH 252 (288)
T ss_pred eeeeeeCCceEEEECCCc----eecCCCCCCCCceEEEEEEEEcCCCce
Confidence 568999999999999944 376443 2 34699999999866443
No 17
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=93.18 E-value=0.34 Score=45.11 Aligned_cols=113 Identities=20% Similarity=0.209 Sum_probs=74.3
Q ss_pred CCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC-CCCCEEEEecCCcceeeeecc-ccc--cCCC
Q 014257 223 DPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD-FVRPFCTVSFLSECNIVFGSN-LKV--VGAG 298 (428)
Q Consensus 223 ~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~-f~~pI~SLSLGS~~vm~F~~~-~~~--~~~g 298 (428)
..+|+.+.+++++..+.|.. +| ..+|..|.+|+....|.|.-- .--|+-.+=|+|.---+|..- +-. ..+.
T Consensus 41 ~~yP~~~~~fl~~ch~aGQ~----rp-tplllrY~~gdyn~LHqdlyGe~vFPlQvv~lLs~Pg~DftGGEFVltEQrPR 115 (173)
T PF09859_consen 41 ARYPATLAEFLARCHAAGQT----RP-TPLLLRYGPGDYNCLHQDLYGEHVFPLQVVILLSEPGEDFTGGEFVLTEQRPR 115 (173)
T ss_pred CCCCccHHHHHHHHHhccCC----CC-chhhheeCCCCccccccCCCCCcccCeEEEEEcCCCCCcccCceEEEEEecCC
Confidence 35788888999888887754 44 456668999999999999843 222344444455544444321 000 1122
Q ss_pred CCCccEEEEcCCCcEEEec----------cccccccccccCCC-CCCeEEEEe
Q 014257 299 EFAGSIPIALPVGSVLVLN----------GNAADVAKHCVPAV-PTKRISITF 340 (428)
Q Consensus 299 ~~~~~~~V~Lp~GSLLVMs----------GesRy~wkH~Ip~~-r~~RISLTF 340 (428)
..+...-|.|..|+.+|+. |..|-.-+|+|..+ .+.|..|.+
T Consensus 116 ~QSR~~V~~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgl 168 (173)
T PF09859_consen 116 MQSRAMVLPLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRVRSGERHTLGL 168 (173)
T ss_pred ccCccccCCcCCCCEEEEecCCCCcCCCccceecccccccccccccceEEEEE
Confidence 3345677999999999996 45566678999874 677877653
No 18
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=92.81 E-value=0.27 Score=46.73 Aligned_cols=85 Identities=21% Similarity=0.347 Sum_probs=55.3
Q ss_pred EEeecCCCCCCCCCCCCCC-C-C--CCEEEEecCCcceeeeeccccccC----CCCCCccEEEEcCCCcEEEeccccccc
Q 014257 252 IVNIYEEGDCIPPHIDNHD-F-V--RPFCTVSFLSECNIVFGSNLKVVG----AGEFAGSIPIALPVGSVLVLNGNAADV 323 (428)
Q Consensus 252 iVN~Y~pG~gI~pHvD~~~-f-~--~pI~SLSLGS~~vm~F~~~~~~~~----~g~~~~~~~V~Lp~GSLLVMsGesRy~ 323 (428)
..|.|..|+...+|+|... - . ... .|+---.|.+.|......++ -.++-+...|.||.|||++..+.+
T Consensus 85 ~Fn~Y~eg~~f~fHvDgavr~~hp~~~~-~lrtdls~tlfl~DPedYdGGeLVv~dtYg~h~VklPAGdLVlypStS--- 160 (229)
T COG3128 85 LFNRYQEGDFFGFHVDGAVRSIHPGSGF-RLRTDLSCTLFLSDPEDYDGGELVVNDTYGNHRVKLPAGDLVLYPSTS--- 160 (229)
T ss_pred hhhhccCCCcccccccCcccccCCCCCc-eeEeeeeeeeecCCccccCCceEEEeccccceEEeccCCCEEEccccc---
Confidence 5689999999999999954 2 1 111 22222233333333211111 012334778999999999999987
Q ss_pred cccccCC-CCCCeEEEEee
Q 014257 324 AKHCVPA-VPTKRISITFR 341 (428)
Q Consensus 324 wkH~Ip~-~r~~RISLTFR 341 (428)
.|+|.+ .|+.|+-.-|.
T Consensus 161 -lH~VtPVTRg~R~asffW 178 (229)
T COG3128 161 -LHEVTPVTRGERFASFFW 178 (229)
T ss_pred -ceeccccccCceEEEeee
Confidence 588887 59999988874
No 19
>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]
Probab=90.56 E-value=4.1 Score=41.23 Aligned_cols=167 Identities=15% Similarity=0.006 Sum_probs=91.9
Q ss_pred eeecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCc-eecCCCc-EEEEcCCccccCCCCCCCCCCC
Q 014257 139 IVNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKK-WMRGKGR-ITIQFGCCYNYATDKNGNPPGI 216 (428)
Q Consensus 139 ~vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~k-W~~~k~R-rv~~fG~~y~Y~~~~~~~~p~~ 216 (428)
.+..-|.+.++.|||+.+|++.|++.-..- |...+.....+ -...... |+.+.- |.+.
T Consensus 92 ~lsw~P~~~~yhd~ls~~e~d~l~~lak~~--------l~~stv~~~~~~~~~~~~~~R~S~~t--~l~~---------- 151 (289)
T KOG1591|consen 92 ELSWDPRVVLYHDFLSDEECDHLISLAKPK--------LERSTVVADKGTGHSTTSAVRTSSGT--FLPD---------- 151 (289)
T ss_pred hcccCCceEeehhcCCHHHHHHHHHhhhhh--------hhceeeeccCCcccccceeeEeccee--EecC----------
Confidence 455678899999999999999998866532 21112110000 0000010 111110 1100
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC-----------CCCCEEEEecCCcce
Q 014257 217 LQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD-----------FVRPFCTVSFLSECN 285 (428)
Q Consensus 217 ~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~-----------f~~pI~SLSLGS~~v 285 (428)
.=.+.+..|-+|+.....++. ..-..+-|--|..|+.-.||.|.-. .+..|+++ .
T Consensus 152 -------~~~~~~~~i~~ri~~~T~l~~-e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~------l 217 (289)
T KOG1591|consen 152 -------GASPVVSRIEQRIADLTGLPV-ENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIATV------L 217 (289)
T ss_pred -------CCCHHHHHHHHHHHhccCCCc-ccCccceEEEecCCccccccccccccccchhhhhcccCCcceeE------E
Confidence 112467777778888877763 3456777888999999999988752 23566665 6
Q ss_pred eeeeccccccCCCCCCcc--EEEEcCCCcEEEec---ccc--ccccccccCC-CCCCeEEEE
Q 014257 286 IVFGSNLKVVGAGEFAGS--IPIALPVGSVLVLN---GNA--ADVAKHCVPA-VPTKRISIT 339 (428)
Q Consensus 286 m~F~~~~~~~~~g~~~~~--~~V~Lp~GSLLVMs---Ges--Ry~wkH~Ip~-~r~~RISLT 339 (428)
|.+....++-.+--+... +.|..+.|+.|..- .++ -..=+|+..+ ..+.|++-|
T Consensus 218 ~yls~v~~GG~TvFP~~~~~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~ 279 (289)
T KOG1591|consen 218 MYLSDVEQGGETVFPNLGMKPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIAT 279 (289)
T ss_pred EEecccCCCCcccCCCCCCcccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeee
Confidence 666653222111011223 47888889988751 111 1122566554 355555555
No 20
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=84.00 E-value=1.9 Score=36.01 Aligned_cols=86 Identities=20% Similarity=0.243 Sum_probs=44.7
Q ss_pred EEEeecCCCCCCCCCCCCCCCCCCEEEEecCCcc-eeeeeccccc-c--C-------CCCCCccEEEEcCCCcEEEeccc
Q 014257 251 CIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSEC-NIVFGSNLKV-V--G-------AGEFAGSIPIALPVGSVLVLNGN 319 (428)
Q Consensus 251 ~iVN~Y~pG~gI~pHvD~~~f~~pI~SLSLGS~~-vm~F~~~~~~-~--~-------~g~~~~~~~V~Lp~GSLLVMsGe 319 (428)
+=+|+|+.|+...+|.-...+-..|+-|.+.... .+.|...... . . .........+....|+|||+.+-
T Consensus 2 ~W~ni~~~g~~~~~H~H~~s~~SgVyYv~~p~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~G~lvlFPs~ 81 (101)
T PF13759_consen 2 SWANIYRKGGYNEPHNHPNSWLSGVYYVQVPEGSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEEGDLVLFPSW 81 (101)
T ss_dssp EEEEEE-TT--EEEE--TT-SEEEEEECE--TTS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---TTEEEEEETT
T ss_pred eeEEEeCCCCccCceECCCcCEEEEEEEECCCCCCceeeeCCCccceecccccccccCcccCceEEeCCCCCEEEEeCCC
Confidence 3478999999999998876644456666666544 3555432100 0 0 01123567788899999999983
Q ss_pred cccccccccCCC--CCCeEEEEe
Q 014257 320 AADVAKHCVPAV--PTKRISITF 340 (428)
Q Consensus 320 sRy~wkH~Ip~~--r~~RISLTF 340 (428)
..|++.+. .+.||||-|
T Consensus 82 ----l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 82 ----LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp ----SEEEE----SSS-EEEEEE
T ss_pred ----CEEeccCcCCCCCEEEEEc
Confidence 35998873 567999987
No 21
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=82.46 E-value=19 Score=35.74 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=23.1
Q ss_pred CceEEEcCCCCHHHHHHHHHHHHhhh
Q 014257 144 AGLELHEGIFSAAEQKRIVDFVHTLN 169 (428)
Q Consensus 144 pGL~li~~FIS~eEe~~Ll~~I~e~~ 169 (428)
.|..+++++|+++|.++|.+.+.++.
T Consensus 28 dGyvvl~~vls~eev~~lr~~i~~~~ 53 (277)
T TIGR02408 28 DGFLLLENLFSDDEVAALLAEVERMT 53 (277)
T ss_pred CCEEECcccCCHHHHHHHHHHHHHHH
Confidence 47789999999999999999998764
No 22
>PLN02904 oxidoreductase
Probab=79.66 E-value=6.1 Score=40.92 Aligned_cols=80 Identities=23% Similarity=0.210 Sum_probs=53.0
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCcceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADV 323 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~ 323 (428)
.+-+|+|.+- -++++|.|.. .++|=+-...-+.... ..+.-+.|.-.+|+++|.-|+.-..
T Consensus 209 ~lrl~~YPp~p~~~~~~g~~~HtD~g-----~lTlL~qd~~GLQV~~--------~~g~Wi~V~p~pgalVVNiGD~Le~ 275 (357)
T PLN02904 209 VMAVNCYPACPEPEIALGMPPHSDFG-----SLTILLQSSQGLQIMD--------CNKNWVCVPYIEGALIVQLGDQVEV 275 (357)
T ss_pred EEEeeecCCCCCcccccCCcCccCCC-----ceEEEecCCCeeeEEe--------CCCCEEECCCCCCeEEEEccHHHHH
Confidence 5789999762 3789999984 3333222211233221 1245788899999999999998887
Q ss_pred c--------ccccC-CCCCCeEEEEeee
Q 014257 324 A--------KHCVP-AVPTKRISITFRK 342 (428)
Q Consensus 324 w--------kH~Ip-~~r~~RISLTFR~ 342 (428)
| .|.|. +....|+||.|-.
T Consensus 276 ~TNG~~kSt~HRVv~~~~~~R~Si~~F~ 303 (357)
T PLN02904 276 MSNGIYKSVVHRVTVNKDYKRLSFASLH 303 (357)
T ss_pred HhCCeeeccCCcccCCCCCCEEEEEEee
Confidence 7 45543 2356799999963
No 23
>PTZ00273 oxidase reductase; Provisional
Probab=79.51 E-value=4.8 Score=40.75 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=53.3
Q ss_pred CEEEEeecCCC------C-CCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccc
Q 014257 249 DSCIVNIYEEG------D-CIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNA 320 (428)
Q Consensus 249 Dq~iVN~Y~pG------~-gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGes 320 (428)
..+-+|+|.+- . ++++|.|. .+++|-+-.. --+.... ..+.-+.|.-.+|+++|.-|++
T Consensus 177 ~~lrl~~YP~~~~~~~~~~g~~~HTD~-----g~lTlL~qd~~~GLqV~~--------~~g~Wi~V~p~pg~lvVNvGD~ 243 (320)
T PTZ00273 177 SVFRMKHYPALPQTKKGRTVCGEHTDY-----GIITLLYQDSVGGLQVRN--------LSGEWMDVPPLEGSFVVNIGDM 243 (320)
T ss_pred ceeeeeecCCCCCccccCcccccccCC-----CeEEEEecCCCCceEEEC--------CCCCEEeCCCCCCeEEEEHHHH
Confidence 35788999652 2 68899998 3444422211 1133321 1235788888999999999998
Q ss_pred cccc--------ccccCCCCCCeEEEEeeec
Q 014257 321 ADVA--------KHCVPAVPTKRISITFRKM 343 (428)
Q Consensus 321 Ry~w--------kH~Ip~~r~~RISLTFR~v 343 (428)
-..| .|.|......|+||.|-.-
T Consensus 244 l~~~TnG~~kSt~HRVv~~~~~R~Si~~F~~ 274 (320)
T PTZ00273 244 MEMWSNGRYRSTPHRVVNTGVERYSMPFFCE 274 (320)
T ss_pred HHHHHCCeeeCCCccccCCCCCeEEEEEEEc
Confidence 8777 4555444567999999543
No 24
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=77.03 E-value=11 Score=36.12 Aligned_cols=90 Identities=21% Similarity=0.235 Sum_probs=58.4
Q ss_pred CCCEEEEeecCCCCCCCCCCCCCCCCCCEEEEecCCc-ceeeeecccccc-------CCC---CCCccEEEEcCCCcEEE
Q 014257 247 VPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVV-------GAG---EFAGSIPIALPVGSVLV 315 (428)
Q Consensus 247 ~PDq~iVN~Y~pG~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~-------~~g---~~~~~~~V~Lp~GSLLV 315 (428)
....+=+|++.+|+....|+-.+.+-..++-|+.-.. ..+.|....... .+. .....+.|.-..|.|||
T Consensus 94 ~i~~~W~ni~~~Gg~h~~H~Hp~~~lSgvyYl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~P~~G~lvl 173 (201)
T TIGR02466 94 RIQKAWVNILPQGGTHSPHLHPGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVPPQEGRVLL 173 (201)
T ss_pred EEeeEeEEEcCCCCccCceECCCceEEEEEEEeCCCCCCceeEecCcchhhhccccccCccccccCccEEECCCCCeEEE
Confidence 3567889999999999999988874445666654332 345555321000 000 01123456668899999
Q ss_pred eccccccccccccCCC--CCCeEEEEe
Q 014257 316 LNGNAADVAKHCVPAV--PTKRISITF 340 (428)
Q Consensus 316 MsGesRy~wkH~Ip~~--r~~RISLTF 340 (428)
+..-. .|+|++. .+.||||-|
T Consensus 174 FPS~L----~H~v~p~~~~~~RISiSF 196 (201)
T TIGR02466 174 FESWL----RHEVPPNESEEERISVSF 196 (201)
T ss_pred ECCCC----ceecCCCCCCCCEEEEEE
Confidence 99833 4999884 679999998
No 25
>PLN02216 protein SRG1
Probab=74.49 E-value=10 Score=39.25 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=53.9
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecC-C-cceeeeeccccccCCCCCCccEEEEcCCCcEEEecccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFL-S-ECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNA 320 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLG-S-~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGes 320 (428)
..+-+|+|.+- -|+++|.|.. ..+|=|- . ..-+...+ .+.-+.|.-.+|.++|.-|+.
T Consensus 210 ~~lRl~~YPp~p~~~~~~G~~~HtD~g-----~lTlL~q~~~v~GLQV~~---------~g~Wi~V~p~pgalvVNiGD~ 275 (357)
T PLN02216 210 QSIRMNYYPPCPQPDQVIGLTPHSDAV-----GLTILLQVNEVEGLQIKK---------DGKWVSVKPLPNALVVNVGDI 275 (357)
T ss_pred heeEEeecCCCCCcccccCccCcccCc-----eEEEEEecCCCCceeEEE---------CCEEEECCCCCCeEEEEcchh
Confidence 46889999762 2799999983 4444232 1 11233322 235778888899999999999
Q ss_pred ccccc--------cccC-CCCCCeEEEEeee
Q 014257 321 ADVAK--------HCVP-AVPTKRISITFRK 342 (428)
Q Consensus 321 Ry~wk--------H~Ip-~~r~~RISLTFR~ 342 (428)
-..|+ |.|- .....|+||.|-.
T Consensus 276 L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~ 306 (357)
T PLN02216 276 LEIITNGTYRSIEHRGVVNSEKERLSVATFH 306 (357)
T ss_pred hHhhcCCeeeccCceeecCCCCCEEEEEEEe
Confidence 88886 6643 3356799999963
No 26
>PLN02947 oxidoreductase
Probab=72.94 E-value=11 Score=39.27 Aligned_cols=81 Identities=23% Similarity=0.270 Sum_probs=53.2
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
..+.+|+|.+- -|+++|.|.. +++|=+-.. .-+...+ .+.-+.|.-.+|+++|--|+.-
T Consensus 225 ~~lrln~YPp~p~~~~~~G~~~HTD~g-----~lTlL~Qd~v~GLQV~~---------~g~Wi~V~p~pga~VVNvGD~L 290 (374)
T PLN02947 225 QMMVVNCYPACPEPELTLGMPPHSDYG-----FLTLLLQDEVEGLQIMH---------AGRWVTVEPIPGSFVVNVGDHL 290 (374)
T ss_pred eeeeeecCCCCCCcccccCCCCccCCC-----ceEEEEecCCCCeeEeE---------CCEEEeCCCCCCeEEEEeCcee
Confidence 35689999762 2799999983 444322211 1122221 2357888888999999999998
Q ss_pred cccc--------cccC-CCCCCeEEEEeeec
Q 014257 322 DVAK--------HCVP-AVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wk--------H~Ip-~~r~~RISLTFR~v 343 (428)
..|+ |.|. +....|+||.|-..
T Consensus 291 q~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~ 321 (374)
T PLN02947 291 EIFSNGRYKSVLHRVRVNSTKPRISVASLHS 321 (374)
T ss_pred eeeeCCEEeccccccccCCCCCEEEEEEEec
Confidence 8885 5442 34567999999643
No 27
>PLN02997 flavonol synthase
Probab=72.60 E-value=10 Score=38.82 Aligned_cols=79 Identities=16% Similarity=0.029 Sum_probs=52.3
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAAD 322 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy 322 (428)
.+-+|+|.+- -++++|.|.. +++|=+-.. --+...+ .+.-+.|.-.+|+++|.-|+.-.
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~g-----~lTlL~Qd~v~GLQV~~---------~g~Wi~V~p~pgalvVNiGD~Le 249 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDMG-----AIALLIPNEVPGLQAFK---------DEQWLDLNYINSAVVVIIGDQLM 249 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCCC-----ceEEEecCCCCCEEEeE---------CCcEEECCCCCCeEEEEechHHH
Confidence 5779999762 2799999983 444423211 1122221 23577888889999999999988
Q ss_pred ccc--------cccCC-CCCCeEEEEeee
Q 014257 323 VAK--------HCVPA-VPTKRISITFRK 342 (428)
Q Consensus 323 ~wk--------H~Ip~-~r~~RISLTFR~ 342 (428)
.|+ |.|.. ....|+||.|-.
T Consensus 250 ~~TNG~~kSt~HRVv~~~~~~R~Si~fF~ 278 (325)
T PLN02997 250 RMTNGRFKNVLHRAKTDKERLRISWPVFV 278 (325)
T ss_pred HHhCCccccccceeeCCCCCCEEEEEEEe
Confidence 886 65543 234599999853
No 28
>PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors. The fold is also found in lysine-specific demethylase NO66.; PDB: 2XDV_A 1VRB_B 4DIQ_B.
Probab=72.47 E-value=6.9 Score=39.72 Aligned_cols=83 Identities=19% Similarity=0.179 Sum_probs=45.5
Q ss_pred EEEEeecC-CCC--CCCCCCCCCCCCCCEEEEecCCcceeeeeccccccC---C-------CCCCccEEEEcCCCcEEEe
Q 014257 250 SCIVNIYE-EGD--CIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVVG---A-------GEFAGSIPIALPVGSVLVL 316 (428)
Q Consensus 250 q~iVN~Y~-pG~--gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~~---~-------g~~~~~~~V~Lp~GSLLVM 316 (428)
.|.+|.|- |+. +++||.|.+. +..|=+.......+........ . ........+.|.+|++|.|
T Consensus 113 ~~~~n~Y~tp~g~~g~~~H~D~~d----vfvlQ~~G~K~W~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~pGD~LYl 188 (319)
T PF08007_consen 113 PVGANAYLTPPGSQGFGPHYDDHD----VFVLQLEGRKRWRLYPPPDEPAPLYSDQPFKQLEEFEPVEEVVLEPGDVLYL 188 (319)
T ss_dssp -EEEEEEEETSSBEESECEE-SSE----EEEEEEES-EEEEEE-SCCCTTTSSCE--TTTCG--STSEEEEE-TT-EEEE
T ss_pred ccceEEEecCCCCCCccCEECCcc----cEEEECCceeEEEECCCCcccccccCCCCccccccCceeEEEEECCCCEEEE
Confidence 78999993 444 9999999974 5555566666666665210000 0 0124577899999999999
Q ss_pred ccccccccccccCCCCCCeEEEEee
Q 014257 317 NGNAADVAKHCVPAVPTKRISITFR 341 (428)
Q Consensus 317 sGesRy~wkH~Ip~~r~~RISLTFR 341 (428)
--. |-|...... .-++|||-
T Consensus 189 PrG----~~H~~~~~~-~S~hltv~ 208 (319)
T PF08007_consen 189 PRG----WWHQAVTTD-PSLHLTVG 208 (319)
T ss_dssp -TT-----EEEEEESS--EEEEEEE
T ss_pred CCC----ccCCCCCCC-CceEEEEe
Confidence 863 345443333 56666665
No 29
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=71.21 E-value=14 Score=38.12 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=53.3
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
..+-+|+|.+- -++++|.|.. +.+|=+-.. --+.... .+.-+.|.-.+|+++|.-|+.-
T Consensus 200 ~~lRl~~YPp~~~~~~~~g~~aHTD~g-----~lTlL~Qd~v~GLQV~~---------~g~Wv~V~p~pgalVVNiGD~L 265 (341)
T PLN02984 200 GVIRVYRYPQCSNEAEAPGMEVHTDSS-----VISILNQDEVGGLEVMK---------DGEWFNVKPIANTLVVNLGDMM 265 (341)
T ss_pred ceEEEEeCCCCCCcccccCccCccCCC-----ceEEEEeCCCCCeeEee---------CCceEECCCCCCeEEEECChhh
Confidence 46889999762 2789999984 333211111 0122211 2357888889999999999999
Q ss_pred cccc--------ccc--CCCCCCeEEEEee
Q 014257 322 DVAK--------HCV--PAVPTKRISITFR 341 (428)
Q Consensus 322 y~wk--------H~I--p~~r~~RISLTFR 341 (428)
..|+ |.| +.....|+||-|-
T Consensus 266 e~wTNg~~kSt~HRVv~~~~~~~R~Sia~F 295 (341)
T PLN02984 266 QVISDDEYKSVLHRVGKRNKKKERYSICYF 295 (341)
T ss_pred hhhcCCeeeCCCCccccCCCCCCeEEEEEE
Confidence 9996 777 2345679999995
No 30
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=70.78 E-value=15 Score=37.98 Aligned_cols=83 Identities=17% Similarity=0.120 Sum_probs=53.5
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
..+.+|+|.+- -|+++|.|.. ..+|=+-.. .-+.... ...+.-+.|.-.+|+++|.-|+.-
T Consensus 195 ~~lrl~~YP~~~~~~~~~G~~~HTD~g-----~lTlL~Qd~v~GLQV~~-------~~~~~Wi~Vpp~pgalVVNiGD~L 262 (358)
T PLN02515 195 QKVVVNYYPKCPQPDLTLGLKRHTDPG-----TITLLLQDQVGGLQATR-------DGGKTWITVQPVEGAFVVNLGDHG 262 (358)
T ss_pred ceEEEeecCCCCChhhccCCCCCCCCC-----eEEEEecCCCCceEEEE-------CCCCeEEECCCCCCeEEEEccHHH
Confidence 36789999751 2799999983 333322111 1133321 112247888889999999999988
Q ss_pred cccc--------ccc-CCCCCCeEEEEeeec
Q 014257 322 DVAK--------HCV-PAVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wk--------H~I-p~~r~~RISLTFR~v 343 (428)
..|+ |.| ......|+||.|-.-
T Consensus 263 ~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~ 293 (358)
T PLN02515 263 HYLSNGRFKNADHQAVVNSNCSRLSIATFQN 293 (358)
T ss_pred HHHhCCeeeeecceEECCCCCCEEEEEEEec
Confidence 8885 553 333567999999643
No 31
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=70.66 E-value=9.8 Score=38.64 Aligned_cols=81 Identities=21% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCCCCCCCCC-CCCCEEEEecC-Ccceeee---------ecccccc-CCCCC-------CccEEEEcCCCcEEEeccccc
Q 014257 261 CIPPHIDNHD-FVRPFCTVSFL-SECNIVF---------GSNLKVV-GAGEF-------AGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 261 gI~pHvD~~~-f~~pI~SLSLG-S~~vm~F---------~~~~~~~-~~g~~-------~~~~~V~Lp~GSLLVMsGesR 321 (428)
+=.||+|... +..+...|+++ .-|.|.- +.+ +.+ .+..+ ...+.|.|.+||+|++.|.
T Consensus 132 ~t~~HqD~~~~~~~~~~lV~~wiAl~d~~~dnGat~vvPgSH-~~~~~~~r~d~~~y~~~~~~pv~lekGDallF~~~-- 208 (299)
T COG5285 132 ATRWHQDYPLVSPGYPALVNAWIALCDFTEDNGATLVVPGSH-KWDVIPERPDHETYLERNAVPVELEKGDALLFNGS-- 208 (299)
T ss_pred ccccccccccccCCccceEEEEEeccccccccCceEEEeccc-ccccCCCCCCccchhhhcceeeeecCCCEEEEcch--
Confidence 5779999877 55667777754 1111111 111 110 01111 1277899999999999994
Q ss_pred cccccccCC--CCCCeEEEEeeeccCC
Q 014257 322 DVAKHCVPA--VPTKRISITFRKMDES 346 (428)
Q Consensus 322 y~wkH~Ip~--~r~~RISLTFR~v~~~ 346 (428)
.| |+--. ....|+.|||+.+...
T Consensus 209 -L~-HaA~aNrT~~~R~A~~~~~~~~~ 233 (299)
T COG5285 209 -LW-HAAGANRTSADRVALTLQFTVSF 233 (299)
T ss_pred -hh-hhhhcCCCCcccceEEEEEeecc
Confidence 44 76543 4578999999987664
No 32
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=70.20 E-value=14 Score=37.82 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=53.1
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc--ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE--CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNA 320 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~--~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGes 320 (428)
..+.+|+|.+- -|+++|.|.. .++|=+-.. .-+.... .+.-+.|.-.+|+++|.-|+.
T Consensus 190 ~~lrl~~YP~~~~~~~~~g~~~HTD~g-----~lTlL~qd~~v~GLQV~~---------~g~Wi~V~p~pg~lVVNiGD~ 255 (337)
T PLN02639 190 QHMAVNYYPPCPEPELTYGLPAHTDPN-----ALTILLQDQQVAGLQVLK---------DGKWVAVNPHPGAFVINIGDQ 255 (337)
T ss_pred cEEEEEcCCCCCCcccccCCCCCcCCC-----ceEEEEecCCcCceEeec---------CCeEEeccCCCCeEEEechhH
Confidence 46789999762 2789999984 333312111 1122221 236788888999999999999
Q ss_pred cccccc--------cc-CCCCCCeEEEEeeec
Q 014257 321 ADVAKH--------CV-PAVPTKRISITFRKM 343 (428)
Q Consensus 321 Ry~wkH--------~I-p~~r~~RISLTFR~v 343 (428)
-..|+- .| .+....|+||.|-.-
T Consensus 256 L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~ 287 (337)
T PLN02639 256 LQALSNGRYKSVWHRAVVNTDKERMSVASFLC 287 (337)
T ss_pred HHHHhCCeeeccCcccccCCCCCEEEEEEEec
Confidence 888854 43 233566999999643
No 33
>PLN02485 oxidoreductase
Probab=69.75 E-value=13 Score=37.81 Aligned_cols=80 Identities=15% Similarity=0.049 Sum_probs=53.9
Q ss_pred EEEEeecCCC----------CCCCCCCCCCCCCCCEEEEecCCc--ceeeeeccccccCCCCCCccEEEEcCCCcEEEec
Q 014257 250 SCIVNIYEEG----------DCIPPHIDNHDFVRPFCTVSFLSE--CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLN 317 (428)
Q Consensus 250 q~iVN~Y~pG----------~gI~pHvD~~~f~~pI~SLSLGS~--~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMs 317 (428)
.+-+|.|.+- -++++|.|. ..++|-+-.+ --+.... ..+.-+.|...+|.++|.-
T Consensus 185 ~lrl~~YP~~~~~~~~~~~~~g~~~HTD~-----g~lTlL~qd~~~~GLqV~~--------~~g~Wi~V~p~pg~~vVNi 251 (329)
T PLN02485 185 VMRIIGYPGVSNLNGPPENDIGCGAHTDY-----GLLTLVNQDDDITALQVRN--------LSGEWIWAIPIPGTFVCNI 251 (329)
T ss_pred eEEEEeCCCCccccCCcccCcccccccCC-----CeEEEEeccCCCCeeeEEc--------CCCcEEECCCCCCcEEEEh
Confidence 5789999752 268899998 3444422211 1244432 1235788888999999999
Q ss_pred cccccccc--------cccCC-CCCCeEEEEeee
Q 014257 318 GNAADVAK--------HCVPA-VPTKRISITFRK 342 (428)
Q Consensus 318 GesRy~wk--------H~Ip~-~r~~RISLTFR~ 342 (428)
|+.-..|+ |.|.. ....|+||.|-.
T Consensus 252 GD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~ 285 (329)
T PLN02485 252 GDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFY 285 (329)
T ss_pred HHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEe
Confidence 99988886 65542 345699999963
No 34
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=69.40 E-value=13 Score=38.39 Aligned_cols=81 Identities=21% Similarity=0.184 Sum_probs=52.5
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
..+.+|+|.+- -|+++|.|.. ..+|=+-.. --+...+ .+.-+.|.-.+|+++|--|+.-
T Consensus 197 ~~lrl~~YPp~~~~~~~~G~~~HtD~g-----~lTlL~Qd~v~GLQV~~---------~g~Wi~V~p~pgalvVNiGD~L 262 (348)
T PLN02912 197 QHMAINYYPPCPQPELTYGLPGHKDAN-----LITVLLQDEVSGLQVFK---------DGKWIAVNPIPNTFIVNLGDQM 262 (348)
T ss_pred ceeeeeecCCCCChhhcCCcCCCcCCC-----ceEEEEECCCCceEEEE---------CCcEEECCCcCCeEEEEcCHHH
Confidence 46789999762 3799999984 233212111 1122221 2357888889999999999998
Q ss_pred cccc--------ccc-CCCCCCeEEEEeeec
Q 014257 322 DVAK--------HCV-PAVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wk--------H~I-p~~r~~RISLTFR~v 343 (428)
..|+ |.| .+....|+||.|-.-
T Consensus 263 ~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~ 293 (348)
T PLN02912 263 QVISNDKYKSVLHRAVVNTDKERISIPTFYC 293 (348)
T ss_pred HHHhCCEEEcccccccCCCCCCEEEEEEEec
Confidence 8874 444 233566999999643
No 35
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=69.32 E-value=12 Score=38.21 Aligned_cols=85 Identities=15% Similarity=0.023 Sum_probs=54.8
Q ss_pred CEEEEeecCCC------C-CCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccc
Q 014257 249 DSCIVNIYEEG------D-CIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNA 320 (428)
Q Consensus 249 Dq~iVN~Y~pG------~-gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGes 320 (428)
..+-+|.|.+- . ++++|.|.- .++|-+-.. .-+..... +....+.-+.|.-.+|+++|--|+.
T Consensus 182 ~~lrl~~YP~~~~~~~~~~g~~~HTD~g-----~lTlL~qd~v~GLQV~~~----~~~~~g~Wi~Vpp~pg~~VVNiGD~ 252 (332)
T PLN03002 182 ATMRLLRYQGISDPSKGIYACGAHSDFG-----MMTLLATDGVMGLQICKD----KNAMPQKWEYVPPIKGAFIVNLGDM 252 (332)
T ss_pred hheeeeeCCCCCCcccCccccccccCCC-----eEEEEeeCCCCceEEecC----CCCCCCcEEECCCCCCeEEEEHHHH
Confidence 34679999762 2 688999983 444323221 11333210 0001235677888889999999999
Q ss_pred ccccc--------cccCCCCCCeEEEEeee
Q 014257 321 ADVAK--------HCVPAVPTKRISITFRK 342 (428)
Q Consensus 321 Ry~wk--------H~Ip~~r~~RISLTFR~ 342 (428)
-..|+ |.|......|+||.|-.
T Consensus 253 L~~wTng~~kSt~HRVv~~~~~R~Sia~F~ 282 (332)
T PLN03002 253 LERWSNGFFKSTLHRVLGNGQERYSIPFFV 282 (332)
T ss_pred HHHHhCCeeECcCCeecCCCCCeeEEEEEe
Confidence 88886 87765566799999963
No 36
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=67.73 E-value=14 Score=38.11 Aligned_cols=80 Identities=16% Similarity=0.171 Sum_probs=52.4
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCC--cceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLS--ECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS--~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
.+-+|+|.+- -++++|.|.. +.+|=+.. ..-+.+.+ .+.-+.|.-.+|+++|.-|+.-
T Consensus 204 ~lRl~~YPp~~~~~~~~g~~~HTD~g-----~lTlL~qd~~v~GLQV~~---------~g~Wi~V~p~pg~lVVNiGD~L 269 (348)
T PLN00417 204 DTRFNMYPPCPRPDKVIGVKPHADGS-----AFTLLLPDKDVEGLQFLK---------DGKWYKAPIVPDTILINVGDQM 269 (348)
T ss_pred eeeeeecCCCCCcccccCCcCccCCC-----ceEEEEecCCCCceeEeE---------CCeEEECCCCCCcEEEEcChHH
Confidence 4789999651 2799999983 33332221 11133322 2357788889999999999998
Q ss_pred ccccc--------cc-CCCCCCeEEEEeeec
Q 014257 322 DVAKH--------CV-PAVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wkH--------~I-p~~r~~RISLTFR~v 343 (428)
..|+. .| .+....|+||.|-.-
T Consensus 270 e~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~ 300 (348)
T PLN00417 270 EIMSNGIYKSPVHRVVTNREKERISVATFCI 300 (348)
T ss_pred HHHhCCeecccceEEecCCCCCEEEEEEEec
Confidence 88864 43 233567999999643
No 37
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=66.91 E-value=17 Score=37.72 Aligned_cols=79 Identities=20% Similarity=0.185 Sum_probs=51.9
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCC--cceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLS--ECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS--~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
.+-+|+|.+- -++++|.|.. +++|-+-. ..-+...+ .+.-+.|.-.+|+++|.-|+.-
T Consensus 214 ~lRl~~YP~~p~~~~~~g~~~HtD~g-----~lTlL~q~~~v~GLQV~~---------~g~W~~V~p~pgalVVNiGD~l 279 (362)
T PLN02393 214 CLRVNYYPKCPQPDLTLGLSPHSDPG-----GMTILLPDDNVAGLQVRR---------DDAWITVKPVPDAFIVNIGDQI 279 (362)
T ss_pred eeeeeecCCCCCcccccccccccCCc-----eEEEEeeCCCCCcceeeE---------CCEEEECCCCCCeEEEEcchhh
Confidence 5678999641 2799999983 34442211 11233322 2357888889999999999998
Q ss_pred cccc--------cccC-CCCCCeEEEEeee
Q 014257 322 DVAK--------HCVP-AVPTKRISITFRK 342 (428)
Q Consensus 322 y~wk--------H~Ip-~~r~~RISLTFR~ 342 (428)
..|+ |.|. +....|+|+.|-.
T Consensus 280 ~~~Tng~~kSt~HRVv~~~~~~R~SiafF~ 309 (362)
T PLN02393 280 QVLSNAIYKSVEHRVIVNSAKERVSLAFFY 309 (362)
T ss_pred HhhcCCeeeccceecccCCCCCEEEEEEEe
Confidence 8883 5542 3355799999963
No 38
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=64.14 E-value=16 Score=37.27 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=52.0
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc--ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE--CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~--~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
.+-+|.|.+- .|+++|.|.. .++|=+..+ --+...+ .+.-+.|.-.+|+++|.-|+.-
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~g-----~lTlL~qd~~v~GLQV~~---------~g~Wi~V~p~pg~lvVNiGD~l 224 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDAG-----GIILLFQDDKVSGLQLLK---------DGEWVDVPPMRHSIVVNLGDQL 224 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCCC-----eEEEEEecCCCCCcCccc---------CCeEEECCCCCCeEEEEeCHHH
Confidence 4688999752 2788999983 344323211 1122221 2357778888999999999999
Q ss_pred cccccc--------cC-CCCCCeEEEEeeec
Q 014257 322 DVAKHC--------VP-AVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wkH~--------Ip-~~r~~RISLTFR~v 343 (428)
..|+.+ |- +....|+||.|-.-
T Consensus 225 ~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~ 255 (321)
T PLN02299 225 EVITNGKYKSVMHRVVAQTDGNRMSIASFYN 255 (321)
T ss_pred HHHhCCceecccceeecCCCCCEEEEEEEec
Confidence 888653 32 23556999999643
No 39
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=64.07 E-value=18 Score=36.37 Aligned_cols=86 Identities=24% Similarity=0.252 Sum_probs=54.5
Q ss_pred CCEEEEeecCC-----C-CCCCCCCCCCCCCCCEEEEecCCc--ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccc
Q 014257 248 PDSCIVNIYEE-----G-DCIPPHIDNHDFVRPFCTVSFLSE--CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGN 319 (428)
Q Consensus 248 PDq~iVN~Y~p-----G-~gI~pHvD~~~f~~pI~SLSLGS~--~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGe 319 (428)
...+-+|+|.+ + -++++|.|.. +++|=+-.. --+.... . ..+.-+.|.-.+|+++|.-|+
T Consensus 148 ~~~lr~~~YP~~p~~~~~~g~~~HtD~g-----~lTlL~qd~~~~GLqV~~------~-~~g~Wi~V~p~pga~vVNiGD 215 (300)
T PLN02365 148 PSQFRINKYNFTPETVGSSGVQIHTDSG-----FLTILQDDENVGGLEVMD------P-SSGEFVPVDPLPGTLLVNLGD 215 (300)
T ss_pred ccceeeeecCCCCCccccccccCccCCC-----ceEEEecCCCcCceEEEE------C-CCCeEEecCCCCCeEEEEhhH
Confidence 35678999954 2 2799999983 333322211 1133322 1 123578888899999999999
Q ss_pred ccccccc--------ccC-CCCCCeEEEEeeeccC
Q 014257 320 AADVAKH--------CVP-AVPTKRISITFRKMDE 345 (428)
Q Consensus 320 sRy~wkH--------~Ip-~~r~~RISLTFR~v~~ 345 (428)
.-..|+. .|- +....|+||.|-...+
T Consensus 216 ~l~~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~ 250 (300)
T PLN02365 216 VATAWSNGRLCNVKHRVQCKEATMRISIASFLLGP 250 (300)
T ss_pred HHHHHhCCceecccceeEcCCCCCEEEEEEEecCC
Confidence 9888854 332 2244699999975444
No 40
>PLN02704 flavonol synthase
Probab=63.31 E-value=15 Score=37.65 Aligned_cols=80 Identities=13% Similarity=0.053 Sum_probs=52.0
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAAD 322 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy 322 (428)
.+.+|+|.+- -++++|.|.. +.+|=+-.. --+...+ .+.-+.|.-.+|+++|.-|+.-.
T Consensus 200 ~lrl~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~---------~g~Wi~V~p~pg~lvVNvGD~L~ 265 (335)
T PLN02704 200 LLKINYYPPCPRPDLALGVVAHTDMS-----AITILVPNEVQGLQVFR---------DDHWFDVKYIPNALVIHIGDQIE 265 (335)
T ss_pred hhhhhcCCCCCCcccccCccCccCCc-----ceEEEecCCCCceeEeE---------CCEEEeCCCCCCeEEEEechHHH
Confidence 4567999762 2789999983 333322111 1122221 23578888899999999999988
Q ss_pred ccc--------cccC-CCCCCeEEEEeeec
Q 014257 323 VAK--------HCVP-AVPTKRISITFRKM 343 (428)
Q Consensus 323 ~wk--------H~Ip-~~r~~RISLTFR~v 343 (428)
.|+ |.|. +....|+||.|-..
T Consensus 266 ~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~ 295 (335)
T PLN02704 266 ILSNGKYKSVLHRTTVNKEKTRMSWPVFLE 295 (335)
T ss_pred HHhCCeeecccceeecCCCCCeEEEEEEec
Confidence 885 4442 23567999999643
No 41
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=62.03 E-value=19 Score=35.76 Aligned_cols=80 Identities=13% Similarity=0.104 Sum_probs=50.9
Q ss_pred EEEEeecCC------CCCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccc
Q 014257 250 SCIVNIYEE------GDCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAAD 322 (428)
Q Consensus 250 q~iVN~Y~p------G~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy 322 (428)
.+.+|+|.+ .-|+++|.|.. .++|=+-.+ .-+.... .+.-+.|.-.+|+++|.-|+.-.
T Consensus 117 ~lrl~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLqV~~---------~g~Wi~V~p~p~a~vVNiGD~l~ 182 (262)
T PLN03001 117 NITVSYYPPCPQPELTLGLQSHSDFG-----AITLLIQDDVEGLQLLK---------DAEWLMVPPISDAILIIIADQTE 182 (262)
T ss_pred hheeecCCCCCCcccccCCcCCcCCC-----eeEEEEeCCCCceEEee---------CCeEEECCCCCCcEEEEccHHHH
Confidence 357888865 23789999983 333311111 1122221 23567777788999999999998
Q ss_pred ccc--------cccC-CCCCCeEEEEeeec
Q 014257 323 VAK--------HCVP-AVPTKRISITFRKM 343 (428)
Q Consensus 323 ~wk--------H~Ip-~~r~~RISLTFR~v 343 (428)
.|+ |.|- .....|+||.|-..
T Consensus 183 ~~tng~~~S~~HRVv~~~~~~R~Sia~F~~ 212 (262)
T PLN03001 183 IITNGNYKSAQHRAIANANKARLSVATFHD 212 (262)
T ss_pred HHhCCccccccceEEcCCCCCEEEEEEEEc
Confidence 887 4433 23556999999643
No 42
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=61.27 E-value=31 Score=36.14 Aligned_cols=99 Identities=18% Similarity=0.251 Sum_probs=57.9
Q ss_pred HHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCCCCCCEEEEecCCcceeeeecccccc----C-----CCCCCccEEE
Q 014257 236 LVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVV----G-----AGEFAGSIPI 306 (428)
Q Consensus 236 l~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~----~-----~g~~~~~~~V 306 (428)
+...+.+| ....|-++|-+-.+|++.++|.|.=. |..|=.-..+.-..+...... . -.........
T Consensus 107 ~~~FrflP-~wr~ddiMIS~a~~GGgvg~H~D~YD----VfliQg~G~RRW~v~~~~~~~~~~~~~d~~~~~~f~~~~d~ 181 (383)
T COG2850 107 MEPFRFLP-DWRIDDIMISFAAPGGGVGPHFDQYD----VFLIQGQGRRRWRVGKKCNMSTLCPHPDLLILAPFEPDIDE 181 (383)
T ss_pred HHHhccCc-cccccceEEEEecCCCccCccccchh----eeEEeecccceeecCCcccccCcCCCcchhhcCCCCchhhh
Confidence 34556666 46778899986688999999999832 222222222222222110000 0 0123456778
Q ss_pred EcCCCcEEEeccccccccccccCCCCCCeEEEEeee
Q 014257 307 ALPVGSVLVLNGNAADVAKHCVPAVPTKRISITFRK 342 (428)
Q Consensus 307 ~Lp~GSLLVMsGesRy~wkH~Ip~~r~~RISLTFR~ 342 (428)
.|.+|++|.+.. -.|.|+|+--.-.-.|+-||.
T Consensus 182 vlepGDiLYiPp---~~~H~gvae~dc~tySvG~r~ 214 (383)
T COG2850 182 VLEPGDILYIPP---GFPHYGVAEDDCMTYSVGFRA 214 (383)
T ss_pred hcCCCceeecCC---CCCcCCcccccccceeeeccC
Confidence 899999888876 245567875455566777663
No 43
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=59.50 E-value=35 Score=35.01 Aligned_cols=83 Identities=19% Similarity=0.124 Sum_probs=53.4
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
..+-+|+|.+- -++++|.|.. +++|=+-.. --+.... ...+.-+.|.-.+|+++|--|+.-
T Consensus 193 ~~lR~~~YPp~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~-------~~~g~Wi~V~p~pg~~vVNiGD~L 260 (345)
T PLN02750 193 SFARFNHYPPCPAPHLALGVGRHKDGG-----ALTVLAQDDVGGLQISR-------RSDGEWIPVKPIPDAFIINIGNCM 260 (345)
T ss_pred eEEEEEecCCCCCcccccCcCCCCCCC-----eEEEEecCCCCceEEee-------cCCCeEEEccCCCCeEEEEhHHHH
Confidence 46789999762 2799999983 344322111 1122211 012357889999999999999998
Q ss_pred ccccc--------ccC-CCCCCeEEEEeeec
Q 014257 322 DVAKH--------CVP-AVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wkH--------~Ip-~~r~~RISLTFR~v 343 (428)
..|+- .|- +....|+||-|-..
T Consensus 261 ~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~ 291 (345)
T PLN02750 261 QVWTNDLYWSAEHRVVVNSQKERFSIPFFFF 291 (345)
T ss_pred HHHhCCeeecccceeccCCCCCEEEEEEeec
Confidence 88854 432 23567999999643
No 44
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.44 E-value=34 Score=32.76 Aligned_cols=102 Identities=19% Similarity=0.158 Sum_probs=66.2
Q ss_pred CCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC---CCCCEEEEecCCcceeeeecc-cc--ccC
Q 014257 223 DPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD---FVRPFCTVSFLSECNIVFGSN-LK--VVG 296 (428)
Q Consensus 223 ~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~---f~~pI~SLSLGS~~vm~F~~~-~~--~~~ 296 (428)
.++|..+..+++++.+.|.+ +|.-+++ .|-||+.-..|+|-=- |-=-+++ |+|+---+|..- +. ...
T Consensus 103 ~r~P~tlad~L~~CHaAGQ~----RpTpLlL-qYgpgD~NcLHQDLYGelvFPLQvai--lLsePg~DfTGGEF~lvEQR 175 (236)
T COG3826 103 ARYPATLADFLARCHAAGQV----RPTPLLL-QYGPGDYNCLHQDLYGELVFPLQVAI--LLSEPGTDFTGGEFVLVEQR 175 (236)
T ss_pred CCCchhHHHHHHHHHhccCc----cCCceeE-EecCCccchhhhhhhhceeeeeeEEE--eccCCCCcccCceEEEEecc
Confidence 46788999999999888865 5555555 7999999999999822 3311222 344434444321 10 011
Q ss_pred CCCCCccEEEEcCCCcEEEec----------cccccccccccCCC
Q 014257 297 AGEFAGSIPIALPVGSVLVLN----------GNAADVAKHCVPAV 331 (428)
Q Consensus 297 ~g~~~~~~~V~Lp~GSLLVMs----------GesRy~wkH~Ip~~ 331 (428)
+.-.+....|.|+.|+-+|+. |..|-..+|+|...
T Consensus 176 PR~QSr~~vvpLrqG~g~vFavr~RPv~gtrG~~r~~lRHGvS~l 220 (236)
T COG3826 176 PRMQSRPTVVPLRQGDGVVFAVRDRPVQGTRGWYRVPLRHGVSRL 220 (236)
T ss_pred cccccCCceeeccCCceEEEEeecCcccCccCccccchhcchhhh
Confidence 222345677999999999984 56666778888763
No 45
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=57.37 E-value=30 Score=35.02 Aligned_cols=80 Identities=20% Similarity=0.165 Sum_probs=49.0
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc--ceeeeeccccccCCCCCCccEEEEcCC-CcEEEecccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE--CNIVFGSNLKVVGAGEFAGSIPIALPV-GSVLVLNGNA 320 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~--~vm~F~~~~~~~~~g~~~~~~~V~Lp~-GSLLVMsGes 320 (428)
.+.+|.|.+- -|+++|.|.. ..+|-+..+ --+...+ .+.-+.|.-.+ ++++|--|+.
T Consensus 154 ~lrl~~YP~~~~~~~~~G~~~HtD~g-----~lTlL~q~~~v~GLqV~~---------~g~Wi~V~p~p~~~lvVNvGD~ 219 (303)
T PLN02403 154 GTKVAKYPECPRPELVRGLREHTDAG-----GIILLLQDDQVPGLEFLK---------DGKWVPIPPSKNNTIFVNTGDQ 219 (303)
T ss_pred eeeeEcCCCCCCcccccCccCccCCC-----eEEEEEecCCCCceEecc---------CCeEEECCCCCCCEEEEEehHH
Confidence 3679999652 2688999984 344433321 1122221 23456666555 5899999998
Q ss_pred cccc--------ccccC-CCCCCeEEEEeeec
Q 014257 321 ADVA--------KHCVP-AVPTKRISITFRKM 343 (428)
Q Consensus 321 Ry~w--------kH~Ip-~~r~~RISLTFR~v 343 (428)
-..| .|.|- +....|+||.|-.-
T Consensus 220 L~~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~ 251 (303)
T PLN02403 220 LEVLSNGRYKSTLHRVMADKNGSRLSIATFYN 251 (303)
T ss_pred HHHHhCCeeecccceeecCCCCCEEEEEEEEc
Confidence 7777 45442 34556999999643
No 46
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=57.21 E-value=34 Score=35.48 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=52.4
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc---ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE---CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNA 320 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~---~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGes 320 (428)
.+-+|+|.+- -|+++|.|.. .++|-+-.. --+...+ .+.-+.|.-.+|+++|.-|+.
T Consensus 212 ~lR~~~YP~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~~v~GLQV~~---------~g~Wi~V~p~pgalVVNiGD~ 277 (361)
T PLN02758 212 AVRMNYYPPCSRPDLVLGLSPHSDGS-----ALTVLQQGKGSCVGLQILK---------DNTWVPVHPVPNALVINIGDT 277 (361)
T ss_pred eeeeecCCCCCCcccccCccCccCCc-----eeEEEEeCCCCCCCeeeee---------CCEEEeCCCCCCeEEEEccch
Confidence 4568999752 2789999983 444423221 0244432 235778888899999999999
Q ss_pred ccccc--------cccC-CCCCCeEEEEeeec
Q 014257 321 ADVAK--------HCVP-AVPTKRISITFRKM 343 (428)
Q Consensus 321 Ry~wk--------H~Ip-~~r~~RISLTFR~v 343 (428)
-..|+ |.|- +....|+||.|-..
T Consensus 278 L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~ 309 (361)
T PLN02758 278 LEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYA 309 (361)
T ss_pred hhhhcCCeeecccceeecCCCCCEEEEEEEec
Confidence 88884 4442 23456999998643
No 47
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=56.80 E-value=23 Score=36.63 Aligned_cols=80 Identities=15% Similarity=0.018 Sum_probs=51.5
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAAD 322 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy 322 (428)
.+.+|+|.+- -++++|.|.. +.+|=+-.. --+.+.. .+.-+.|.-.+|+++|--|+.-.
T Consensus 212 ~lrl~~YP~~~~~~~~~g~~~HTD~g-----~lTlL~qd~v~GLQV~~---------~g~Wi~V~p~pg~lvVNiGD~L~ 277 (360)
T PLN03178 212 QMKINYYPRCPQPDLALGVEAHTDVS-----ALTFILHNMVPGLQVLY---------EGKWVTAKCVPDSIVVHIGDTLE 277 (360)
T ss_pred hhheeccCCCCCCccccCcCCccCCC-----ceEEEeeCCCCceeEeE---------CCEEEEcCCCCCeEEEEccHHHH
Confidence 4678999752 2789999983 333322111 1122221 23578888899999999999887
Q ss_pred cc--------ccccC-CCCCCeEEEEeeec
Q 014257 323 VA--------KHCVP-AVPTKRISITFRKM 343 (428)
Q Consensus 323 ~w--------kH~Ip-~~r~~RISLTFR~v 343 (428)
.| .|.|. .....|+||.|-.-
T Consensus 278 ~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~ 307 (360)
T PLN03178 278 ILSNGRYKSILHRGLVNKEKVRISWAVFCE 307 (360)
T ss_pred HHhCCccccccceeecCCCCCeEEEEEEec
Confidence 77 45532 33456999999643
No 48
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=56.45 E-value=41 Score=34.61 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=51.7
Q ss_pred CEEEEeecCCC--------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccc
Q 014257 249 DSCIVNIYEEG--------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGN 319 (428)
Q Consensus 249 Dq~iVN~Y~pG--------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGe 319 (428)
..+.+|+|.+- -++++|.|.. +++|=+-.. --+.... ..+.-+.|.-.+|.++|--|+
T Consensus 178 ~~lRl~~YP~~~~~~~~~~~g~~~HTD~g-----~lTlL~Qd~v~GLQV~~--------~~g~Wi~Vpp~pga~VVNiGD 244 (335)
T PLN02156 178 SCLRMNHYPEKEETPEKVEIGFGEHTDPQ-----LISLLRSNDTAGLQICV--------KDGTWVDVPPDHSSFFVLVGD 244 (335)
T ss_pred ceEeEEeCCCCCCCccccccCCCCccCCC-----ceEEEEeCCCCceEEEe--------CCCCEEEccCCCCcEEEEhHH
Confidence 46789999651 2788999973 333312111 0122211 124578888899999999999
Q ss_pred cccccccc--------cC-CCCCCeEEEEeee
Q 014257 320 AADVAKHC--------VP-AVPTKRISITFRK 342 (428)
Q Consensus 320 sRy~wkH~--------Ip-~~r~~RISLTFR~ 342 (428)
.-..|+.+ |- +....|+||.|-.
T Consensus 245 ~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~ 276 (335)
T PLN02156 245 TLQVMTNGRFKSVKHRVVTNTKRSRISMIYFA 276 (335)
T ss_pred HHHHHhCCeeeccceeeecCCCCCEEEEEEee
Confidence 98888654 22 2345699999964
No 49
>PLN02276 gibberellin 20-oxidase
Probab=54.66 E-value=36 Score=35.21 Aligned_cols=81 Identities=15% Similarity=0.036 Sum_probs=52.9
Q ss_pred CEEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 249 DSCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 249 Dq~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
..+-+|+|.+- -++++|.|.- .++|-+-.. .-+.... .+.-+.|.-.+|+++|--|+.-
T Consensus 206 ~~lrl~~YP~~~~~~~~~g~~~HTD~g-----~lTlL~Qd~v~GLQV~~---------~g~Wi~V~p~pgalVVNiGD~L 271 (361)
T PLN02276 206 SIMRCNYYPPCQEPELTLGTGPHCDPT-----SLTILHQDQVGGLQVFV---------DNKWRSVRPRPGALVVNIGDTF 271 (361)
T ss_pred ceeeeEeCCCCCCcccccCCccccCCc-----eeEEEEecCCCceEEEE---------CCEEEEcCCCCCeEEEEcHHHH
Confidence 56789999763 2799999983 333322111 0122221 2357888889999999999998
Q ss_pred cccccc--------c-CCCCCCeEEEEeeec
Q 014257 322 DVAKHC--------V-PAVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wkH~--------I-p~~r~~RISLTFR~v 343 (428)
..|+-+ | .+....|+||.|-.-
T Consensus 272 ~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~ 302 (361)
T PLN02276 272 MALSNGRYKSCLHRAVVNSERERRSLAFFLC 302 (361)
T ss_pred HHHhCCccccccceeecCCCCCEEEEEEEec
Confidence 888543 2 233567999999643
No 50
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=51.02 E-value=47 Score=34.45 Aligned_cols=81 Identities=20% Similarity=0.237 Sum_probs=52.8
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAAD 322 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy 322 (428)
.+-+|+|.+- -|+++|.|.. ..+|=+-.. --+.... +.+.-+.|.-.+|.++|--|+.-.
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~g-----~lTiL~Qd~v~GLQV~~--------~~~~Wi~V~p~pgalVVNiGD~lq 277 (358)
T PLN02254 211 ALQLNSYPVCPDPDRAMGLAPHTDSS-----LLTILYQSNTSGLQVFR--------EGVGWVTVPPVPGSLVVNVGDLLH 277 (358)
T ss_pred eEEEecCCCCCCcccccCcCCccCCC-----cEEEEecCCCCCceEEC--------CCCEEEEcccCCCCEEEEhHHHHH
Confidence 5679999762 2899999983 444423211 1123321 122578888899999999999988
Q ss_pred cccc--------ccC-CCCCCeEEEEeeec
Q 014257 323 VAKH--------CVP-AVPTKRISITFRKM 343 (428)
Q Consensus 323 ~wkH--------~Ip-~~r~~RISLTFR~v 343 (428)
.|+- .|. .....|+||.|-.-
T Consensus 278 ~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~ 307 (358)
T PLN02254 278 ILSNGRFPSVLHRAVVNKTRHRISVAYFYG 307 (358)
T ss_pred HHhCCeeccccceeecCCCCCEEEEEEEec
Confidence 8854 332 23567999999643
No 51
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=49.52 E-value=18 Score=33.07 Aligned_cols=82 Identities=17% Similarity=0.163 Sum_probs=50.9
Q ss_pred CCCEEEEeecCCCCCCCCCCCCCCCC-CCEEEEec-CCcceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccccc
Q 014257 247 VPDSCIVNIYEEGDCIPPHIDNHDFV-RPFCTVSF-LSECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVA 324 (428)
Q Consensus 247 ~PDq~iVN~Y~pG~gI~pHvD~~~f~-~pI~SLSL-GS~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~w 324 (428)
..-.+.+....||..|.||.|...+. ..-+.|.. -..|.|..+. ..+....|-++++... +
T Consensus 78 ~~~~~~~s~l~pg~~I~pH~d~~~~~lR~Hl~L~~p~~~~~~~v~~-------------~~~~w~~G~~~~fD~s----~ 140 (163)
T PF05118_consen 78 PLGRVRFSRLPPGTHIKPHRDPTNLRLRLHLPLIVPNPGCYIRVGG-------------ETRHWREGECWVFDDS----F 140 (163)
T ss_dssp TCEEEEEEEEECTEEEEEE-SS-TTEEEEEEEEC--STTEEEEETT-------------EEEB--CTEEEEE-TT----S
T ss_pred chhhEEEEEECCCCEECCeeCCCCcceEEEEEEEcCCCCeEEEECC-------------eEEEeccCcEEEEeCC----E
Confidence 44578899999999999999986532 33334433 2556666552 3567799999999874 4
Q ss_pred ccccC-CCCCCeEEEEeeeccC
Q 014257 325 KHCVP-AVPTKRISITFRKMDE 345 (428)
Q Consensus 325 kH~Ip-~~r~~RISLTFR~v~~ 345 (428)
.|.+- .....||.|.+--.++
T Consensus 141 ~H~~~N~~~~~Rv~L~vD~~hP 162 (163)
T PF05118_consen 141 EHEVWNNGDEDRVVLIVDFWHP 162 (163)
T ss_dssp -EEEEESSSS-EEEEEEEEE-T
T ss_pred EEEEEeCCCCCEEEEEEEeecC
Confidence 57654 3678999999865543
No 52
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=44.64 E-value=72 Score=32.65 Aligned_cols=81 Identities=20% Similarity=0.194 Sum_probs=51.1
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCC--cceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLS--ECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS--~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
.+.+|+|.+= -|+++|.|.. +.+|=|-. -.-+.+.+ ..+.-+.|.--+|+++|.-|+.-
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~~-----~lTiLlqd~~V~GLQv~~--------~dg~Wi~V~P~p~a~vVNiGD~l 243 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDKS-----FLTILLQDDDVGGLQVFT--------KDGKWIDVPPIPGAFVVNIGDML 243 (322)
T ss_pred EEEEeecCCCcCccccccccCccCcC-----ceEEEEccCCcCceEEEe--------cCCeEEECCCCCCCEEEEcccHH
Confidence 6789999762 2899999994 22222222 11223331 12356777777799999999987
Q ss_pred cccc--------cccCCCC-CCeEEEEeeec
Q 014257 322 DVAK--------HCVPAVP-TKRISITFRKM 343 (428)
Q Consensus 322 y~wk--------H~Ip~~r-~~RISLTFR~v 343 (428)
..|. |.|-..+ ..|+|+-|-..
T Consensus 244 ~~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~ 274 (322)
T KOG0143|consen 244 QILSNGRYKSVLHRVVVNGEKERISVAFFVF 274 (322)
T ss_pred hHhhCCcccceEEEEEeCCCCceEEEEEEec
Confidence 7774 5444333 33999998643
No 53
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=41.20 E-value=1.8e+02 Score=27.56 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=59.0
Q ss_pred EEEEeec-CCCCCCCCCCCCCCCCCCEEEEecCCcceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccccccccc
Q 014257 250 SCIVNIY-EEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCV 328 (428)
Q Consensus 250 q~iVN~Y-~pG~gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~I 328 (428)
..+|..+ -+|+...+|++... .-++. |-....|.+.. .++...|.|..|+++++.+... |..
T Consensus 34 d~~VmvvgGpn~r~d~H~~~td--E~Fyq--leG~~~l~v~d---------~g~~~~v~L~eGd~fllP~gvp----HsP 96 (177)
T PRK13264 34 DFIVMVVGGPNARTDFHYDPGE--EFFYQ--LEGDMYLKVQE---------DGKRRDVPIREGEMFLLPPHVP----HSP 96 (177)
T ss_pred CEEEEEEccCCcccccccCCCc--eEEEE--ECCeEEEEEEc---------CCceeeEEECCCCEEEeCCCCC----cCC
Confidence 4555566 67888999996632 11222 44555666653 1234679999999999999876 443
Q ss_pred CCCCCCeEEEEeeeccCCCCCCCCCCCCC
Q 014257 329 PAVPTKRISITFRKMDESKRPFGFVPEPD 357 (428)
Q Consensus 329 p~~r~~RISLTFR~v~~~~c~c~~~~~~d 357 (428)
.+ ...-+-|.+-..++....=++..+|+
T Consensus 97 ~r-~~~tv~LviE~~r~~~~~d~~~wyc~ 124 (177)
T PRK13264 97 QR-EAGSIGLVIERKRPEGELDGFQWYCD 124 (177)
T ss_pred cc-CCCeEEEEEEeCCCCCCccceEEECC
Confidence 32 45667788877777665556667776
No 54
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=40.14 E-value=2.2e+02 Score=26.56 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=56.0
Q ss_pred EEEEeec-CCCCCCCCCCCCCCCCCCEEEEecCCcceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccccccccc
Q 014257 250 SCIVNIY-EEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCV 328 (428)
Q Consensus 250 q~iVN~Y-~pG~gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~I 328 (428)
+.+|-.+ -||+...+|++.. +.-++. |-....|.+.. .+....|.|..|+++++.+...+.+
T Consensus 28 ~~~v~~vgGpn~R~d~H~~~t--dE~Fyq--leG~~~l~v~d---------~g~~~~v~L~eGd~flvP~gvpHsP---- 90 (159)
T TIGR03037 28 EFMVTVVGGPNARTDFHDDPG--EEFFYQ--LKGEMYLKVTE---------EGKREDVPIREGDIFLLPPHVPHSP---- 90 (159)
T ss_pred cEEEEEeCCCCCCcccccCCC--ceEEEE--EcceEEEEEEc---------CCcEEEEEECCCCEEEeCCCCCccc----
Confidence 5566666 6777888999652 122222 34445666663 1245679999999999999876443
Q ss_pred CCCCCCeEEEEeeeccCCCCCCCCCCCCC
Q 014257 329 PAVPTKRISITFRKMDESKRPFGFVPEPD 357 (428)
Q Consensus 329 p~~r~~RISLTFR~v~~~~c~c~~~~~~d 357 (428)
.+ ...-+-|-+-..++..--=++..+|+
T Consensus 91 ~r-~~~t~~LvIE~~r~~~~~d~~~wyc~ 118 (159)
T TIGR03037 91 QR-PAGSIGLVIERKRPQGELDGFQWFCP 118 (159)
T ss_pred cc-CCCcEEEEEEeCCCCCCCcceEEECC
Confidence 33 34455666666666554555556675
No 55
>KOG2731 consensus DNA alkylation damage repair protein [RNA processing and modification]
Probab=33.95 E-value=24 Score=36.76 Aligned_cols=43 Identities=33% Similarity=0.607 Sum_probs=37.9
Q ss_pred CCCEEEEeecCCCCCCCCCCCCCC------CCCCEEEEecCCcceeeeec
Q 014257 247 VPDSCIVNIYEEGDCIPPHIDNHD------FVRPFCTVSFLSECNIVFGS 290 (428)
Q Consensus 247 ~PDq~iVN~Y~pG~gI~pHvD~~~------f~~pI~SLSLGS~~vm~F~~ 290 (428)
.||-|++|+|.+-..++.|+|-.+ .+=||.++|.|. ..|.++.
T Consensus 313 lp~i~~~~f~~~~g~~~~~Q~~~ey~ks~r~nl~Irqv~~~d-~~f~~~~ 361 (378)
T KOG2731|consen 313 LPDICIVNFYSETGSLGLHQDKAEYLKSSRVNLPIRQVSIGD-AEFLYGD 361 (378)
T ss_pred CcccccccccCCCcccccchhHHHHHHhhhcCceeEEeccCc-cccccCc
Confidence 799999999999999999999864 346899999999 7998886
No 56
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=33.21 E-value=1.1e+02 Score=30.61 Aligned_cols=86 Identities=20% Similarity=0.259 Sum_probs=49.5
Q ss_pred EEEEeecCCCCCCCCCCCCCC-CCCCEEEEecCCcce--------e-eeeccccccCCC-CCCccEEEEcCCCcEEEecc
Q 014257 250 SCIVNIYEEGDCIPPHIDNHD-FVRPFCTVSFLSECN--------I-VFGSNLKVVGAG-EFAGSIPIALPVGSVLVLNG 318 (428)
Q Consensus 250 q~iVN~Y~pG~gI~pHvD~~~-f~~pI~SLSLGS~~v--------m-~F~~~~~~~~~g-~~~~~~~V~Lp~GSLLVMsG 318 (428)
-+-++.|.+|..+..|.|... -+-..++.-++..+. + .|.. +. ++. ..+....|.=+=++|++|.-
T Consensus 137 e~~~~~y~~G~~l~~H~D~~~~~~~R~~~yv~y~~r~wkpe~GGeL~l~~s-~~--~~~~~~~~~~ti~P~fn~lv~F~s 213 (252)
T COG3751 137 EGQITVYNPGCFLLKHDDNGRDKDIRLATYVYYLTREWKPEYGGELRLFHS-LQ--KNNTAADSFKTIAPVFNSLVFFKS 213 (252)
T ss_pred eeeeeEecCCceeEeecccCCCccceEEEEEeccCCCCCcCCCCceeeccc-cc--ccccccccccccCCCCceEEEEEe
Confidence 567899999999999999965 332233332332211 1 0100 00 000 01122334444578888877
Q ss_pred ccccccccccCC--CCCCeEEEE
Q 014257 319 NAADVAKHCVPA--VPTKRISIT 339 (428)
Q Consensus 319 esRy~wkH~Ip~--~r~~RISLT 339 (428)
.....| |.|.. ....|+|||
T Consensus 214 ~~~Hs~-h~V~~~~~~~~RlsV~ 235 (252)
T COG3751 214 RPSHSV-HSVEEPYAAADRLSVT 235 (252)
T ss_pred cCCccc-eeccccccccceEEEe
Confidence 665454 77766 799999999
No 57
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=25.13 E-value=84 Score=27.98 Aligned_cols=25 Identities=20% Similarity=0.348 Sum_probs=21.7
Q ss_pred CceEEEcCCCCHHHHHHHHHHHHhh
Q 014257 144 AGLELHEGIFSAAEQKRIVDFVHTL 168 (428)
Q Consensus 144 pGL~li~~FIS~eEe~~Ll~~I~e~ 168 (428)
.|..+++++|++++.++|.+.+.++
T Consensus 4 ~Gyvvi~~~l~~~~~~~l~~~~~~~ 28 (211)
T PF05721_consen 4 DGYVVIRNVLSPEEVERLREELDRL 28 (211)
T ss_dssp HSEEEETTSS-HHHHHHHHHHHHHH
T ss_pred CcEEEECCcCCHHHHHHHHHHHHHH
Confidence 3889999999999999999999875
No 58
>PF08372 PRT_C: Plant phosphoribosyltransferase C-terminal; InterPro: IPR013583 This domain is found at the C terminus of phosphoribosyltransferases and phosphoribosyltransferase-like proteins. It contains putative transmembrane regions. It often appears together with calcium-ion dependent C2 domains (IPR000008 from INTERPRO).
Probab=23.37 E-value=39 Score=31.26 Aligned_cols=23 Identities=39% Similarity=0.442 Sum_probs=18.4
Q ss_pred ccCCCCCCChhhhhhccchhhhh
Q 014257 55 AETPSPRMSWADMAQEDELEEEG 77 (428)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~ 77 (428)
......++|+||++..||+|||.
T Consensus 23 p~~~d~~ls~~~~~~~deldEEf 45 (156)
T PF08372_consen 23 PPHMDTKLSHADSAHPDELDEEF 45 (156)
T ss_pred CCCCCccccccccCCcchhhhhh
Confidence 33567799999999999988754
No 59
>PF08943 CsiD: CsiD; InterPro: IPR015038 This group of proteins consists of various bacterial proteins pertaining to the non-haem Fe(II)-dependent oxygenase family. CsiD of Escherichia coli is induced on carbon starvation. Its expression is sigma-S dependent and additionally requires activation by cAMP-CRP []. The exact function and role of CsiD is unknown, but a putative role may involve the control of utilisation of gamma-aminobutyric acid and glutamate accumulation in general stress adaption []. ; GO: 0005506 iron ion binding; PDB: 2R6S_A 1JR7_A.
Probab=20.63 E-value=69 Score=32.32 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=17.6
Q ss_pred CCccEEEEcCCCcEEEeccccccccccccC
Q 014257 300 FAGSIPIALPVGSVLVLNGNAADVAKHCVP 329 (428)
Q Consensus 300 ~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip 329 (428)
....+.|.||+||+||+.. +.|.||-.
T Consensus 251 s~~~~~v~vpvG~~lv~NN---~fwLHGR~ 277 (297)
T PF08943_consen 251 SKNKFSVPVPVGSFLVINN---HFWLHGRD 277 (297)
T ss_dssp -TT-EEE---TT-EEEEET---TTEEEEE-
T ss_pred CCCeEEEEcCCCcEEEEee---EEEEeccC
Confidence 4578999999999999987 88999854
Done!