Query 014257
Match_columns 428
No_of_seqs 241 out of 1365
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 08:19:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tht_A Alkylated DNA repair pr 100.0 4.2E-41 1.4E-45 339.5 16.8 195 139-360 106-329 (345)
2 2iuw_A Alkylated repair protei 100.0 5.9E-34 2E-38 273.9 13.3 184 143-347 39-233 (238)
3 3i3q_A Alpha-ketoglutarate-dep 100.0 3.1E-31 1.1E-35 251.0 17.9 186 141-347 4-206 (211)
4 3s57_A Alpha-ketoglutarate-dep 100.0 1.3E-31 4.4E-36 252.1 14.0 180 143-344 8-203 (204)
5 2jig_A Prolyl-4 hydroxylase; h 97.1 0.0047 1.6E-07 57.6 12.6 172 139-341 15-214 (224)
6 3lfm_A Protein FTO; FAT MASS a 96.9 0.0089 3E-07 61.7 12.6 97 246-345 187-316 (495)
7 3dkq_A PKHD-type hydroxylase S 96.8 0.0062 2.1E-07 58.3 10.1 79 250-341 100-192 (243)
8 3itq_A Prolyl 4-hydroxylase, a 96.6 0.008 2.7E-07 56.5 9.7 160 141-341 36-209 (216)
9 2hbt_A EGL nine homolog 1; pro 96.3 0.097 3.3E-06 49.9 15.0 84 250-342 118-211 (247)
10 2rg4_A Uncharacterized protein 93.2 0.18 6E-06 47.1 7.1 91 248-342 102-205 (216)
11 2a1x_A Phytanoyl-COA dioxygena 89.4 2.9 9.9E-05 40.0 11.6 41 302-346 214-256 (308)
12 2fct_A Syringomycin biosynthes 87.9 4.3 0.00015 38.8 11.6 41 302-346 218-262 (313)
13 3kt7_A PKHD-type hydroxylase T 84.0 27 0.00091 37.6 16.1 102 247-355 123-239 (633)
14 1w9y_A 1-aminocyclopropane-1-c 73.1 5 0.00017 39.3 6.1 80 250-343 156-252 (319)
15 3oox_A Putative 2OG-Fe(II) oxy 64.9 5.2 0.00018 38.8 4.3 82 248-342 168-269 (312)
16 1gp6_A Leucoanthocyanidin diox 61.9 7.9 0.00027 38.4 5.0 80 250-343 211-306 (356)
17 3on7_A Oxidoreductase, iron/as 56.7 7.9 0.00027 37.1 3.8 80 249-341 150-251 (280)
18 4diq_A Lysine-specific demethy 55.3 25 0.00086 36.7 7.5 86 250-343 163-264 (489)
19 1dcs_A Deacetoxycephalosporin 53.7 8.1 0.00028 37.5 3.4 81 248-342 156-265 (311)
20 1odm_A Isopenicillin N synthas 49.1 12 0.0004 36.6 3.8 80 250-343 181-287 (331)
21 2opw_A Phyhd1 protein; double- 41.3 30 0.001 32.3 5.1 45 302-352 226-272 (291)
22 3rcq_A Aspartyl/asparaginyl be 31.3 56 0.0019 29.9 5.1 81 248-345 101-184 (197)
23 3fjs_A Uncharacterized protein 25.6 94 0.0032 24.8 5.0 70 250-340 37-106 (114)
24 1vrb_A Putative asparaginyl hy 25.1 3.6E+02 0.012 26.1 10.1 37 301-341 215-252 (342)
25 2xdv_A MYC-induced nuclear ant 21.2 1.6E+02 0.0055 30.0 6.8 87 250-343 138-236 (442)
No 1
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=100.00 E-value=4.2e-41 Score=339.47 Aligned_cols=195 Identities=25% Similarity=0.380 Sum_probs=149.0
Q ss_pred eeecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEEEEcCCccccCCCCCCCCCCCCC
Q 014257 139 IVNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFGCCYNYATDKNGNPPGILQ 218 (428)
Q Consensus 139 ~vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG~~y~Y~~~~~~~~p~~~~ 218 (428)
...+|+||.|+++|||++||++|++.|.+.+.. ..+ .+|...++|++++||+.|+|++.... .
T Consensus 106 ~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~---~~~--------~~~~~l~~Rr~~~yG~~Y~Ys~~~~~------~ 168 (345)
T 3tht_A 106 PQALPPGLMVVEEIISSEEEKMLLESVDWTEDT---DNQ--------NSQKSLKHRRVKHFGYEFHYENNNVD------K 168 (345)
T ss_dssp CCSCCTTEEEETTCSCHHHHHHHHTTCC---------------------------CEEECCC------------------
T ss_pred cccCCCceEEEcCcCCHHHHHHHHHhcccCCcc---ccc--------cCcccccCceEEEECCcccccccccc------c
Confidence 456799999999999999999999888754421 111 23444578999999999999876432 2
Q ss_pred CCCC-CCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC-CCCCEEEEecCCcceeeeeccccccC
Q 014257 219 NEPV-DPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD-FVRPFCTVSFLSECNIVFGSNLKVVG 296 (428)
Q Consensus 219 ~~~~-~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~-f~~pI~SLSLGS~~vm~F~~~~~~~~ 296 (428)
..+. .+||++|..|++|+.+.++++ ..||+|+||+|.+|++|+||+|.+. |+++|++||||++++|.|++.
T Consensus 169 ~~p~p~~~P~~L~~l~~r~~~~~~~~--~~~n~~lvN~Y~~G~~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~~----- 241 (345)
T 3tht_A 169 DKPLSGGLPDICESFLEKWLRKGYIK--HKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHP----- 241 (345)
T ss_dssp ------CCCHHHHHHHHHHHHHTSCS--SCCSEEEEEEECTTCCEEEECCCTTTBCSCEEEEEESSCEEEEEECT-----
T ss_pred CCCCCcCcCHHHHHHHHHHHhcccCC--CCCCEEEEEEecCCCCEeeccCCchhcCCeEEEEECCCceeEEEccC-----
Confidence 2333 579999999999998777653 6899999999999999999999987 999999999999999999973
Q ss_pred CCCCCccEEEEcCCCcEEEeccccccccccccCCC---------------------------CCCeEEEEeeeccCCCCC
Q 014257 297 AGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAV---------------------------PTKRISITFRKMDESKRP 349 (428)
Q Consensus 297 ~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~---------------------------r~~RISLTFR~v~~~~c~ 349 (428)
.+..++|.|++||||||.|++|+.|+|+|+++ |++|||||||+|++++|+
T Consensus 242 ---~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~ 318 (345)
T 3tht_A 242 ---DGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCN 318 (345)
T ss_dssp ---TSCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCC
T ss_pred ---CCceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcC
Confidence 23578999999999999999999999999861 778999999999999999
Q ss_pred CCCCCCCCCCC
Q 014257 350 FGFVPEPDLQG 360 (428)
Q Consensus 350 c~~~~~~d~~~ 360 (428)
|+|+.+||+|+
T Consensus 319 C~~~~~cd~~~ 329 (345)
T 3tht_A 319 CSYPLVCDSQR 329 (345)
T ss_dssp CSCTTTCTTTT
T ss_pred CCCCCcccCCC
Confidence 99999999996
No 2
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=100.00 E-value=5.9e-34 Score=273.85 Aligned_cols=184 Identities=18% Similarity=0.270 Sum_probs=142.5
Q ss_pred CCceEEEcCCCCHHHHHHHHHHHH-hhhhccccccccceeeeCCCceecCCCcEEEEcC-CccccCCCCCCCCCCCCCCC
Q 014257 143 LAGLELHEGIFSAAEQKRIVDFVH-TLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFG-CCYNYATDKNGNPPGILQNE 220 (428)
Q Consensus 143 ~pGL~li~~FIS~eEe~~Ll~~I~-e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG-~~y~Y~~~~~~~~p~~~~~~ 220 (428)
++||.|+++||+++|++.|++.|. +.++......+ .++++. ..|++.+|| +.|+|+... ..
T Consensus 39 i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~-------~g~~~~-~~R~~~~~g~~~Y~Ys~~~---------~~ 101 (238)
T 2iuw_A 39 VSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR-------EDITYQ-QPRLTAWYGELPYTYSRIT---------ME 101 (238)
T ss_dssp CEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES-------SSCEEE-CSSEEEEEECCCTTSCHHH---------HC
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceec-------CCcccc-cCCeeEEcCCCccccCCcc---------cC
Confidence 457999999999999999999995 45543322111 233333 369999999 678886432 12
Q ss_pred CCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCC-CCCCCCCCCC-CC--CCEEEEecCCcceeeeeccccccC
Q 014257 221 PVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGD-CIPPHIDNHD-FV--RPFCTVSFLSECNIVFGSNLKVVG 296 (428)
Q Consensus 221 ~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~-gI~pHvD~~~-f~--~pI~SLSLGS~~vm~F~~~~~~~~ 296 (428)
+..+||++|..|.+++.+.. ...||+|+||+|.+|+ +|+||+|.+. |+ .+|++||||++|+|.|++......
T Consensus 102 ~~p~wp~~l~~l~~~~~~~~----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~ 177 (238)
T 2iuw_A 102 PNPHWHPVLRTLKNRIEENT----GHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEE 177 (238)
T ss_dssp CBSSCCHHHHHHHHHHHHHH----SCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC---
T ss_pred CCCCCCHHHHHHHHHHHHHh----CCCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCccc
Confidence 33589999999998886653 2368999999999996 9999999987 77 899999999999999998521100
Q ss_pred CCC--CCccEEEEcCCCcEEEeccccccccccccCCC---CCCeEEEEeeeccCCC
Q 014257 297 AGE--FAGSIPIALPVGSVLVLNGNAADVAKHCVPAV---PTKRISITFRKMDESK 347 (428)
Q Consensus 297 ~g~--~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~---r~~RISLTFR~v~~~~ 347 (428)
.++ ....++|.|++||||||.|++|+.|+|+|++. ++.|||||||++.+++
T Consensus 178 ~~~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR~v~~~~ 233 (238)
T 2iuw_A 178 NGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVYPDP 233 (238)
T ss_dssp -----CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCCC--
T ss_pred cCcccCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEeeeccccc
Confidence 010 14679999999999999999999999999986 8999999999998754
No 3
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.97 E-value=3.1e-31 Score=250.96 Aligned_cols=186 Identities=19% Similarity=0.265 Sum_probs=140.5
Q ss_pred ecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEE-----EEcC--CccccCCCCCCCC
Q 014257 141 NILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRIT-----IQFG--CCYNYATDKNGNP 213 (428)
Q Consensus 141 n~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv-----~~fG--~~y~Y~~~~~~~~ 213 (428)
.+.||+.++++|+. ++|+.|++.|.++.+... +... ....++-| .-|.+ .+|| ..|.|++....
T Consensus 4 ~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~p---~~~~-~~pgg~~~--s~~~~~~g~~~W~~d~~~Y~Ys~~~~~-- 74 (211)
T 3i3q_A 4 PLAAGAVILRRFAF-NAAEQLIRDINDVASQSP---FRQM-VTPGGYTM--SVAMTNCGHLGWTTHRQGYLYSPIDPQ-- 74 (211)
T ss_dssp CCBTTBEEETTTTT-TTHHHHHHHHHHHHHHSC---CBCC-BCTTSCBC--SSEEEEESSBEEEEETTEEEEESBCTT--
T ss_pred ecCCCCEEECCcCh-HHHHHHHHHHHHHHhcCC---Ccee-EcCCCCcC--chhhcccccceeecCCCCcCcCCCccC--
Confidence 45789999999998 688899999988765332 1100 00112222 12333 2333 35778754311
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCC-CC-CCCCEEEEecCCcceeeeecc
Q 014257 214 PGILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDN-HD-FVRPFCTVSFLSECNIVFGSN 291 (428)
Q Consensus 214 p~~~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~-~~-f~~pI~SLSLGS~~vm~F~~~ 291 (428)
...++.+||++|..|++++.....++ .+.||+|+||+|.+|++|+||+|. .. |+.+|+|||||++|+|.|++.
T Consensus 75 ----~~~pw~~~P~~L~~l~~~~~~~~g~~-~~~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~ 149 (211)
T 3i3q_A 75 ----TNKPWPAMPQSFHNLCQRAATAAGYP-DFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGL 149 (211)
T ss_dssp ----TSSBCCCCCHHHHHHHHHHHHHTTCT-TCCCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEEEEESCEEEEECCS
T ss_pred ----CCCCCCchHHHHHHHHHHHHHhcCCC-CcCCCEEEEEEEcCCCCcccccCCCccccCCCEEEEECCCCeEEEEecc
Confidence 23567889999999999998765543 468899999999999999999995 44 899999999999999999973
Q ss_pred ccccCCCCCCccEEEEcCCCcEEEeccccccccccccCCCC--------CCeEEEEeeeccCCC
Q 014257 292 LKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAVP--------TKRISITFRKMDESK 347 (428)
Q Consensus 292 ~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~r--------~~RISLTFR~v~~~~ 347 (428)
...+...+|.|++||||||.|++|+ |+|+|++.. +.|||||||++.+.+
T Consensus 150 ------~~~~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTFR~~~~~~ 206 (211)
T 3i3q_A 150 ------KRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE 206 (211)
T ss_dssp ------STTSCCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEEEECCSCC-
T ss_pred ------cCCCceEEEECCCCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEEeeeccCCc
Confidence 2345688999999999999999997 999999854 579999999998754
No 4
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.97 E-value=1.3e-31 Score=252.14 Aligned_cols=180 Identities=21% Similarity=0.282 Sum_probs=140.8
Q ss_pred CCce-EEEcCCCCHHHHHHHHHHHH-hhhh---ccccccccceeeeCCCceecCCCcEEEEcC---CccccCCCCCCCCC
Q 014257 143 LAGL-ELHEGIFSAAEQKRIVDFVH-TLNE---MGTKGELKEKTYSAPKKWMRGKGRITIQFG---CCYNYATDKNGNPP 214 (428)
Q Consensus 143 ~pGL-~li~~FIS~eEe~~Ll~~I~-e~~~---~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG---~~y~Y~~~~~~~~p 214 (428)
-+|| .++++||+.+|++.|++.|. +.++ +..+-.+ .+|++. ..|.+.+|| ..|.|+...
T Consensus 8 ~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~-------~gk~~~-~pR~~~wyg~~~~~Y~Ysg~~----- 74 (204)
T 3s57_A 8 AEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV-------FGKWHS-VPRKQATYGDAGLTYTFSGLT----- 74 (204)
T ss_dssp ETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE-------TTEEEE-CSSEEEEEECTTCCEEETTEE-----
T ss_pred eCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE-------CCeEec-cCcEEEEECCCCCCcccCCCc-----
Confidence 4574 46999999999999999985 4554 1111112 345554 359999999 678887542
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCC-CCCCCCCCCC---CCCCEEEEecCCcceeeeec
Q 014257 215 GILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGD-CIPPHIDNHD---FVRPFCTVSFLSECNIVFGS 290 (428)
Q Consensus 215 ~~~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~-gI~pHvD~~~---f~~pI~SLSLGS~~vm~F~~ 290 (428)
....|||++|..|.+++.+.. ...||+|+||+|.+|+ +|++|.|.+. ++++|+|||||++|+|.|++
T Consensus 75 -----~~~~pwp~~L~~l~~~~~~~~----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~ 145 (204)
T 3s57_A 75 -----LSPKPWIPVLERIRDHVSGVT----GQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRH 145 (204)
T ss_dssp -----ECCEECCHHHHHHHHHHHHHH----CCCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEE
T ss_pred -----ccCCCCCHHHHHHHHHHHHHh----CCCCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEE
Confidence 234689999999999986643 2478999999999999 9999999975 57899999999999999997
Q ss_pred ccccc-CCCCCCccEEEEcCCCcEEEeccccccccccccCCCC---CCeEEEEeeecc
Q 014257 291 NLKVV-GAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAVP---TKRISITFRKMD 344 (428)
Q Consensus 291 ~~~~~-~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~r---~~RISLTFR~v~ 344 (428)
..... +.......++|.|++||||||.|++|+.|+|+||+.. +.|||||||+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTFR~i~ 203 (204)
T 3s57_A 146 KDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFRKIL 203 (204)
T ss_dssp GGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEEECBC
T ss_pred cCCCccccccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEeeeec
Confidence 52111 1112235789999999999999999999999999865 999999999874
No 5
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=97.12 E-value=0.0047 Score=57.61 Aligned_cols=172 Identities=17% Similarity=0.152 Sum_probs=98.1
Q ss_pred eeecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCC--CceecCCCcE--EEEcCCccccCCCCCCCCC
Q 014257 139 IVNILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAP--KKWMRGKGRI--TIQFGCCYNYATDKNGNPP 214 (428)
Q Consensus 139 ~vn~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~--~kW~~~k~Rr--v~~fG~~y~Y~~~~~~~~p 214 (428)
.+..-|-+.+++||||++|.+.|++..... ++..++... ++......|. ..++
T Consensus 15 ~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~--------~~~s~v~~~~~g~~~~~~~R~s~~~~l--------------- 71 (224)
T 2jig_A 15 HLSWSPRAFLLKNFLSDEECDYIVEKARPK--------MVKSSVVDNESGKSVDSEIRTSTGTWF--------------- 71 (224)
T ss_dssp EEETTTTEEEETTCSCHHHHHHHHHHHGGG--------CEECEEEETTTTEEEECSSBCSEEEEC---------------
T ss_pred EEeCCCCEEEEcccCCHHHHHHHHHHhhcc--------CeeeeeecCCCCcccccCCEEEeeeEe---------------
Confidence 356678899999999999999999988641 111111100 0000001110 0010
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC---------CCCCEEEEec-CCcc
Q 014257 215 GILQNEPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD---------FVRPFCTVSF-LSEC 284 (428)
Q Consensus 215 ~~~~~~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~---------f~~pI~SLSL-GS~~ 284 (428)
. ..-.+.+..|.+|+.....+|.. ....+.|+.|.+|+.-.+|.|... .+..++|+-| +++.
T Consensus 72 ------~-~~~~~~~~~i~~ri~~~~gl~~~-~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~ 143 (224)
T 2jig_A 72 ------A-KGEDSVISKIEKRVAQVTMIPLE-NHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTV 143 (224)
T ss_dssp ------C-TTCSHHHHHHHHHHHHHHTCCGG-GBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCC
T ss_pred ------c-CCCCHHHHHHHHHHHHHhCCCcc-cccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCC
Confidence 0 00134577788888776666522 334678889999999999999732 1355666542 2221
Q ss_pred e----eeeeccc-cccC---CCCCCccEEEEcCCCcEEEec-----cccccccccccCCC-CCCeEEEEee
Q 014257 285 N----IVFGSNL-KVVG---AGEFAGSIPIALPVGSVLVLN-----GNAADVAKHCVPAV-PTKRISITFR 341 (428)
Q Consensus 285 v----m~F~~~~-~~~~---~g~~~~~~~V~Lp~GSLLVMs-----GesRy~wkH~Ip~~-r~~RISLTFR 341 (428)
. ..|-... .... ..-....+.|..+.|++|++. |..-....|++.++ .+.|+++|..
T Consensus 144 ~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~W 214 (224)
T 2jig_A 144 EEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKW 214 (224)
T ss_dssp SEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEE
T ss_pred CCCCceeCCCcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEe
Confidence 1 1111100 0000 000013588999999999994 33334557998885 7899999974
No 6
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=96.86 E-value=0.0089 Score=61.70 Aligned_cols=97 Identities=16% Similarity=0.153 Sum_probs=65.2
Q ss_pred CCCCEEEEeecCCCC---------------CCCCCCCCCCCC-CC--EEEEecCCcc---------------eeeeeccc
Q 014257 246 CVPDSCIVNIYEEGD---------------CIPPHIDNHDFV-RP--FCTVSFLSEC---------------NIVFGSNL 292 (428)
Q Consensus 246 ~~PDq~iVN~Y~pG~---------------gI~pHvD~~~f~-~p--I~SLSLGS~~---------------vm~F~~~~ 292 (428)
+.+|..+||+++|-+ .++||.|..--+ .+ |++.|-..+. +-..+=+.
T Consensus 187 ~~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglki 266 (495)
T 3lfm_A 187 AAYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKI 266 (495)
T ss_dssp TCCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEECCC-------------CCTTSEEEEEEE
T ss_pred ceeehhhhhccCcccccccccccccCCcceeeeeccccccccCcceEEEEeecCCccccccccccCCCCCccceeEeeee
Confidence 378999999998853 256788775421 23 4444443211 00000000
Q ss_pred cccCCCCCCccEEEEcCCCcEEEeccccccccccccCCCCCCeEEEEeeeccC
Q 014257 293 KVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVPAVPTKRISITFRKMDE 345 (428)
Q Consensus 293 ~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~r~~RISLTFR~v~~ 345 (428)
.. .-..+.+.|+|+.||++.|-++-....+|||-+....|+|=|.|...-
T Consensus 267 aw---Di~tP~L~vpL~sgd~Y~Mldd~N~~HqH~VlaG~~~RfSSTHRVA~~ 316 (495)
T 3lfm_A 267 SW---DIETPGLAIPLHQGDCYFMLDDLNATHQHCVLAGSQPRFSSTHRVAEC 316 (495)
T ss_dssp TT---CCSSCEEEEEECTTCEEEECTTHHHHEEEEEECCSSCEEEEEEECBCC
T ss_pred cc---cCCCCceeeecCCCCeeeecchhhhhhhhhhhcCCCccccccceeeee
Confidence 00 012367899999999999999999999999999989999999996653
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.75 E-value=0.0062 Score=58.34 Aligned_cols=79 Identities=28% Similarity=0.343 Sum_probs=53.3
Q ss_pred EEEEeecCCCCCCCCCCCCCC--C-C---CCEEEE-ecCCc------ceeeeeccccccCCCCCCccEEEEcCCCcEEEe
Q 014257 250 SCIVNIYEEGDCIPPHIDNHD--F-V---RPFCTV-SFLSE------CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVL 316 (428)
Q Consensus 250 q~iVN~Y~pG~gI~pHvD~~~--f-~---~pI~SL-SLGS~------~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVM 316 (428)
.+.++.|.+|+...+|+|... . + ..++++ -++++ -.+.|.. ..+...|..+.|+++++
T Consensus 100 ~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~---------~~~~~~V~P~~G~~v~F 170 (243)
T 3dkq_A 100 PPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQD---------TYGQQSIKLSAGSLVLY 170 (243)
T ss_dssp EEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEE---------TTEEEEECCCTTCEEEE
T ss_pred cceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEee---------CCCcEEEecCCCEEEEE
Confidence 388999999999999999854 1 1 112222 22332 1122221 12356799999999999
Q ss_pred ccccccccccccCCC-CCCeEEEEee
Q 014257 317 NGNAADVAKHCVPAV-PTKRISITFR 341 (428)
Q Consensus 317 sGesRy~wkH~Ip~~-r~~RISLTFR 341 (428)
... ..|++.++ ++.|+++|+.
T Consensus 171 ~s~----~lH~v~pV~~G~R~~~~~W 192 (243)
T 3dkq_A 171 PSS----SLHQVTPVLSGERTAAFMW 192 (243)
T ss_dssp ETT----SEEEECCEEEECEEEEEEE
T ss_pred CCC----CeEcCccccccCEEEEEEe
Confidence 764 47999885 7999999974
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=96.62 E-value=0.008 Score=56.51 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=93.8
Q ss_pred ecCCceEEEcCCCCHHHHHHHHHHHHhhhhccccccccceeeeCCCceecCCCcEEEEcC-CccccCCCCCCCCCCCCCC
Q 014257 141 NILAGLELHEGIFSAAEQKRIVDFVHTLNEMGTKGELKEKTYSAPKKWMRGKGRITIQFG-CCYNYATDKNGNPPGILQN 219 (428)
Q Consensus 141 n~~pGL~li~~FIS~eEe~~Ll~~I~e~~~~~~~~~L~~~t~~~~~kW~~~k~Rrv~~fG-~~y~Y~~~~~~~~p~~~~~ 219 (428)
..-|.+.+++||||++|.+.|++..... |+..+. ..+ ..-.+-+. ..
T Consensus 36 ~~~P~i~~~~~fLs~~Ec~~Li~~a~~~--------l~~s~v---------------~~~~~~~~~RtS---------~~ 83 (216)
T 3itq_A 36 FEEPLIVVLGNVLSDEECDELIELSKSK--------LARSKV---------------GSSRDVNDIRTS---------SG 83 (216)
T ss_dssp ETTTTEEEEESCSCHHHHHHHHHHHHHH--------HC-----------------------CCCCGGGT---------TC
T ss_pred eCCCCEEEECCcCCHHHHHHHHHHhhcc--------ccccee---------------ccCCccCCcEee---------ee
Confidence 3469999999999999999999987532 111000 000 00000000 00
Q ss_pred CCCCCCcHHHHHHHHHHHHccCCCCCCCCCEEEEeecCCCCCCCCCCCCCC------CCCCEEEEec-CCcceeeeeccc
Q 014257 220 EPVDPLPHLFKVIIRRLVKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHD------FVRPFCTVSF-LSECNIVFGSNL 292 (428)
Q Consensus 220 ~~~~piP~~L~~Li~Rl~~~~iip~~~~PDq~iVN~Y~pG~gI~pHvD~~~------f~~pI~SLSL-GS~~vm~F~~~~ 292 (428)
.-+.. .+.+..|.+|+.....++. ...+.+.|..|.+|+.-.+|.|... .+..++++-| +++ +. -+...
T Consensus 84 ~wl~~-~~~v~~i~~Ri~~~~gl~~-~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd-~~-~GGeT 159 (216)
T 3itq_A 84 AFLDD-NELTAKIEKRISSIMNVPA-SHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLND-VE-EGGET 159 (216)
T ss_dssp EECCC-CHHHHHHHHHHHHHHTSCG-GGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSC-CS-EECCE
T ss_pred EEeCC-cHHHHHHHHHHHHhcCcee-ccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEeccc-CC-cCcee
Confidence 01112 4667788888877666542 1234678889999999999999853 1345555532 222 10 01000
Q ss_pred cccCCCCCCccEEEEcCCCcEEEecc-----ccccccccccCCC-CCCeEEEEee
Q 014257 293 KVVGAGEFAGSIPIALPVGSVLVLNG-----NAADVAKHCVPAV-PTKRISITFR 341 (428)
Q Consensus 293 ~~~~~g~~~~~~~V~Lp~GSLLVMsG-----esRy~wkH~Ip~~-r~~RISLTFR 341 (428)
.. +...+.|....|++|++.. +......|++.++ .+.|+++|..
T Consensus 160 ~F-----p~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W 209 (216)
T 3itq_A 160 FF-----PKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQW 209 (216)
T ss_dssp EE-----TTTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEE
T ss_pred Ee-----cCCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEee
Confidence 00 1235788889999999974 2223456988774 7899999973
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=96.26 E-value=0.097 Score=49.86 Aligned_cols=84 Identities=19% Similarity=0.141 Sum_probs=53.0
Q ss_pred EEEEeecCC-CCCCCCCCCCCCCCCCEEEE-ecCCc--------ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccc
Q 014257 250 SCIVNIYEE-GDCIPPHIDNHDFVRPFCTV-SFLSE--------CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGN 319 (428)
Q Consensus 250 q~iVN~Y~p-G~gI~pHvD~~~f~~pI~SL-SLGS~--------~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGe 319 (428)
.+.+..|.+ |++..+|+|...-....+++ -.+.+ -.+.|-. ........|.-..|.|++|..+
T Consensus 118 e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~-------~~~~~~~~v~P~~grlv~F~s~ 190 (247)
T 2hbt_A 118 KAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFP-------EGKAQFADIEPKFDRLLFFWSD 190 (247)
T ss_dssp CEEEEEECSSSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECC-------TTCSSCEEECCBTTEEEEEECS
T ss_pred eEEEEEecCCCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEec-------CCCCceEEEEcCCCEEEEEecC
Confidence 367889996 99999999995422223322 22222 0122221 1112346677778999999864
Q ss_pred cccccccccCCCCCCeEEEEeee
Q 014257 320 AADVAKHCVPAVPTKRISITFRK 342 (428)
Q Consensus 320 sRy~wkH~Ip~~r~~RISLTFR~ 342 (428)
.+ ..|+|.+..+.|+|||..-
T Consensus 191 ~~--~~H~V~p~~~~R~sit~W~ 211 (247)
T 2hbt_A 191 RR--NPHEVQPAYATRYAITVWY 211 (247)
T ss_dssp TT--CCEEECCBSSCEEEEEEEE
T ss_pred CC--ceeeeccCCCEEEEEEEEE
Confidence 32 3599998899999999743
No 10
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.18 E-value=0.18 Score=47.06 Aligned_cols=91 Identities=23% Similarity=0.298 Sum_probs=60.7
Q ss_pred CCEEEEeecCCCCCCCCCCCCCCCCCCEEEEecCC-cceeeeecccccc-------CCCC---CCccEEEEcCCCcEEEe
Q 014257 248 PDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLS-ECNIVFGSNLKVV-------GAGE---FAGSIPIALPVGSVLVL 316 (428)
Q Consensus 248 PDq~iVN~Y~pG~gI~pHvD~~~f~~pI~SLSLGS-~~vm~F~~~~~~~-------~~g~---~~~~~~V~Lp~GSLLVM 316 (428)
...+-+|+|.+|+...+|++...+-..|+-|.... ...+.|....... ..+. ......|.-..|.|+|+
T Consensus 102 i~~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 102 LEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred EeeEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 34688999999999999999866445567777642 3367776421000 0000 11234677788999999
Q ss_pred ccccccccccccCCC--CCCeEEEEeee
Q 014257 317 NGNAADVAKHCVPAV--PTKRISITFRK 342 (428)
Q Consensus 317 sGesRy~wkH~Ip~~--r~~RISLTFR~ 342 (428)
... ..|+|.+. .+.||||+|=-
T Consensus 182 pS~----l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 182 ESW----LRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp ETT----SCEEECCCCSSSCEEEEEEEE
T ss_pred CCC----CEEeccCCCCCCCEEEEEEEe
Confidence 653 46999984 56899999943
No 11
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=89.37 E-value=2.9 Score=39.96 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=32.3
Q ss_pred ccEEEEcCCCcEEEeccccccccccccCC--CCCCeEEEEeeeccCC
Q 014257 302 GSIPIALPVGSVLVLNGNAADVAKHCVPA--VPTKRISITFRKMDES 346 (428)
Q Consensus 302 ~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~--~r~~RISLTFR~v~~~ 346 (428)
..+.+.+++||++++.+. .| |+-.+ ....|.+|+|+.....
T Consensus 214 ~~v~~~~~aGd~vlf~~~---~~-H~s~~N~s~~~R~~~~~~y~~~~ 256 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPL---LI-HGSGQNKTQGFRKAISCHFASAD 256 (308)
T ss_dssp CCEEECBCTTCEEEECTT---CC-EEECCBCSSSCEEEEEEEEEETT
T ss_pred CeEEccCCCccEEEECCC---cc-ccCCCCCCCCceEEEEEEEECCC
Confidence 568899999999999994 33 76544 3578999999987753
No 12
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=87.88 E-value=4.3 Score=38.78 Aligned_cols=41 Identities=12% Similarity=0.275 Sum_probs=32.1
Q ss_pred ccEEEEcCCCcEEEeccccccccccccCC----CCCCeEEEEeeeccCC
Q 014257 302 GSIPIALPVGSVLVLNGNAADVAKHCVPA----VPTKRISITFRKMDES 346 (428)
Q Consensus 302 ~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~----~r~~RISLTFR~v~~~ 346 (428)
..+.+.+++||++++.+.. -|+-.+ ....|+++++|.+...
T Consensus 218 ~~v~~~~~aGd~v~f~~~l----~H~s~~N~~ss~~~R~a~~~~y~~~~ 262 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTL----MHASYPHSGESQEMRMGFASRYVPSF 262 (313)
T ss_dssp GCEEECBCTTEEEEEETTS----EEEECCBCSSSSSCEEEEEEEEEETT
T ss_pred ceeEeeeCCceEEEEeCCc----eeeCCCCCCCCCCceEEEEEEEECCC
Confidence 4578999999999999953 376443 2468999999987765
No 13
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=84.04 E-value=27 Score=37.63 Aligned_cols=102 Identities=15% Similarity=0.116 Sum_probs=59.8
Q ss_pred CCCEEEEeecCCCCCCCCCCCCCCCCC-CEEEEecCCc----------ceeeeeccccccCCCC--CCccEEEEcCCCcE
Q 014257 247 VPDSCIVNIYEEGDCIPPHIDNHDFVR-PFCTVSFLSE----------CNIVFGSNLKVVGAGE--FAGSIPIALPVGSV 313 (428)
Q Consensus 247 ~PDq~iVN~Y~pG~gI~pHvD~~~f~~-pI~SLSLGS~----------~vm~F~~~~~~~~~g~--~~~~~~V~Lp~GSL 313 (428)
.++ +.++.|.+|+.+.+|.|. ++. .|..|-.+.+ -.+.+-... ..+. .+....|.=..|.|
T Consensus 123 ~~D-~~~a~Y~~G~fL~~H~D~--~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d---~~~~P~~d~~~~I~P~fNrL 196 (633)
T 3kt7_A 123 KTD-MSINTYTKGCHLLTHDDV--IGSRRISFILYLPDPDRKWKSHYGGGLRLFPSI---LPNVPHSDPSAKLVPQFNQI 196 (633)
T ss_dssp CCC-EEEEEECTTCEEEEECCC--CTTEEEEEEEECSCTTSCCCGGGBCCEEECCEE---ETTEECSSCSEEECCCTTEE
T ss_pred cee-EEEEEeCCCCeeeecCCC--CCCeEEEEEEEcCCCCCCCCccCCceEEEecCC---CcCCCCCCceEEEecCCCeE
Confidence 344 889999999999999996 332 2333222221 012221100 0000 11234454455888
Q ss_pred EEeccccccccccccCCC--CCCeEEEEeeeccCCCCCCCCCCC
Q 014257 314 LVLNGNAADVAKHCVPAV--PTKRISITFRKMDESKRPFGFVPE 355 (428)
Q Consensus 314 LVMsGesRy~wkH~Ip~~--r~~RISLTFR~v~~~~c~c~~~~~ 355 (428)
++|.-.-...| |+|..+ ...|.|||-....+.+-+=||.+-
T Consensus 197 V~F~vsp~~S~-H~V~eV~~~~~RlSItGWF~~p~~~~~gy~~g 239 (633)
T 3kt7_A 197 AFFKVLPGFSF-HDXEEVKVDKHRLSIQGWYHIPQVGEEGYIPG 239 (633)
T ss_dssp EEEECCTTTCC-EEECCBCSSCCEEEEEEEEECCCTTSTTCCTT
T ss_pred EEEEcCCCCCc-CCCCccCCCCCEEEEEEEeccCCCcccCcCcc
Confidence 88876422345 987764 788999998877787777766543
No 14
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=73.15 E-value=5 Score=39.26 Aligned_cols=80 Identities=15% Similarity=0.044 Sum_probs=53.6
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCC--cceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLS--ECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAA 321 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS--~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesR 321 (428)
.+-+|+|.+- .++++|.|.. +.+|-+-. ..-+...+ .+.-+.|.-.+|+++|.-|+.-
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g-----~lTlL~qd~~v~GLQV~~---------~g~Wi~V~p~pgalvVNiGD~l 221 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAG-----GIILLFQDDKVSGLQLLK---------DGQWIDVPPMRHSIVVNLGDQL 221 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSS-----SEEEEEESSSCCCEEEEE---------TTEEEECCCCTTCEEEEECHHH
T ss_pred eeEEEecCCCcccccccccccccCCC-----ceEEEEecCCCCeeeEee---------CCeEEEcccCCCcEEEEhHHHH
Confidence 5789999752 3799999983 34432321 12233322 2357888889999999999998
Q ss_pred cccccccC---------CCCCCeEEEEeeec
Q 014257 322 DVAKHCVP---------AVPTKRISITFRKM 343 (428)
Q Consensus 322 y~wkH~Ip---------~~r~~RISLTFR~v 343 (428)
..|+.+.= .....|+||.|-.-
T Consensus 222 ~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~ 252 (319)
T 1w9y_A 222 EVITNGKYKSVMHRVIAQKDGARMSLASFYN 252 (319)
T ss_dssp HHHTTTSSCCCCEEECCCSSSCCEEEEEEEE
T ss_pred HHHhCCeeecccceecCCCCCCceEEEEEec
Confidence 88866522 23567999999644
No 15
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=64.94 E-value=5.2 Score=38.79 Aligned_cols=82 Identities=18% Similarity=0.109 Sum_probs=52.6
Q ss_pred CCEEEEeecCC------CCCCCCCCCCCCCCCCEEEEecCC-cceeeeeccccccCCCCCCccEEEEcCCCcEEEecccc
Q 014257 248 PDSCIVNIYEE------GDCIPPHIDNHDFVRPFCTVSFLS-ECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNA 320 (428)
Q Consensus 248 PDq~iVN~Y~p------G~gI~pHvD~~~f~~pI~SLSLGS-~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGes 320 (428)
...+-+|+|.+ +-++++|.|.. +++|-+-. ..-+.... ..+.-+.|.-.+|+++|.-|+.
T Consensus 168 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLqV~~--------~~g~W~~V~p~pg~~vVNiGD~ 234 (312)
T 3oox_A 168 NSVLRLLHYPPIPKDATGVRAGAHGDIN-----TITLLLGAEEGGLEVLD--------RDGQWLPINPPPGCLVINIGDM 234 (312)
T ss_dssp CCEEEEEEECCCSSCCC--CEEEECCCS-----SEEEEECCTTSCEEEEC--------TTSCEEECCCCSSCEEEEECHH
T ss_pred cceeeeEecCCCCCCcCCcCccceecCc-----eEEEEeEcCcCceEEEC--------CCCcEEECCCCCCeEEEEhHHH
Confidence 35678999975 23688999983 44442332 11233321 1235788888999999999999
Q ss_pred cccccc--------ccCCC-----CCCeEEEEeee
Q 014257 321 ADVAKH--------CVPAV-----PTKRISITFRK 342 (428)
Q Consensus 321 Ry~wkH--------~Ip~~-----r~~RISLTFR~ 342 (428)
-..|+- .|-.. ...|+||.|-.
T Consensus 235 l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~ 269 (312)
T 3oox_A 235 LERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFL 269 (312)
T ss_dssp HHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEE
T ss_pred HHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEe
Confidence 888854 44322 34599999864
No 16
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=61.90 E-value=7.9 Score=38.38 Aligned_cols=80 Identities=13% Similarity=0.008 Sum_probs=52.4
Q ss_pred EEEEeecCCC------CCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEecccccc
Q 014257 250 SCIVNIYEEG------DCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAAD 322 (428)
Q Consensus 250 q~iVN~Y~pG------~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy 322 (428)
.+-+|+|.+- -++++|.|.. +.+|-+-.. .-+...+ .+.-+.|.-.+|+++|.-|+.-.
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~---------~g~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDVS-----ALTFILHNMVPGLQLFY---------EGKWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCCS-----SEEEEEECSCCCEEEEE---------TTEEEECCCCTTCEEEEECHHHH
T ss_pred eeeeeecCCCCCcccccCcCCccCCC-----eEEEEEEcCCCCeEEec---------CCcEEECcCCCCeEEEEeccHHH
Confidence 5679999752 3789999983 333322211 1122221 23578888899999999999988
Q ss_pred ccccc--------cC-CCCCCeEEEEeeec
Q 014257 323 VAKHC--------VP-AVPTKRISITFRKM 343 (428)
Q Consensus 323 ~wkH~--------Ip-~~r~~RISLTFR~v 343 (428)
.|+.+ |- +....|+||.|-.-
T Consensus 277 ~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~ 306 (356)
T 1gp6_A 277 ILSNGKYKSILHRGLVNKEKVRISWAVFCE 306 (356)
T ss_dssp HHTTTSSCCCCEEECCCSSCCEEEEEEEEE
T ss_pred HhcCCEeeccCceecCCCCCCEEEEEEeec
Confidence 88654 32 23567999999644
No 17
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=56.68 E-value=7.9 Score=37.06 Aligned_cols=80 Identities=16% Similarity=0.130 Sum_probs=51.7
Q ss_pred CEEEEeecCCC-------C-CCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCCCcEEEeccc
Q 014257 249 DSCIVNIYEEG-------D-CIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGN 319 (428)
Q Consensus 249 Dq~iVN~Y~pG-------~-gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGe 319 (428)
..+-+|+|.+- . ++++|.|.. +.+|-+-.. .-+.... ..+.-+.|.-.+|+++|.-|+
T Consensus 150 ~~lr~~~YP~~~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~~GLqV~~--------~~g~W~~V~p~pg~~vVNiGD 216 (280)
T 3on7_A 150 TLLRILHYPPMTGDEEMGAIRAAAHEDIN-----LITVLPTANEPGLQVKA--------KDGSWLDVPSDFGNIIINIGD 216 (280)
T ss_dssp CEEEEEEECCCCTTCCCCSEEEEEECCCS-----SEEEEECCSCCCEEEEC--------TTSCEEECCCCTTCEEEEECH
T ss_pred ceEEEEECCCCCCccccCcccccCCCCCC-----eEEEEEecCCCCeEEEc--------CCCCEEECcCCCCEEEEEcCh
Confidence 46789999752 1 588999983 444433221 1233331 123578888889999999999
Q ss_pred cccccc--------cccCCC-----CCCeEEEEee
Q 014257 320 AADVAK--------HCVPAV-----PTKRISITFR 341 (428)
Q Consensus 320 sRy~wk--------H~Ip~~-----r~~RISLTFR 341 (428)
.-..|+ |.|... ...|+||.|-
T Consensus 217 ~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F 251 (280)
T 3on7_A 217 MLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLF 251 (280)
T ss_dssp HHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEE
T ss_pred HHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEE
Confidence 988886 443222 3479999885
No 18
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=55.28 E-value=25 Score=36.73 Aligned_cols=86 Identities=13% Similarity=0.049 Sum_probs=50.1
Q ss_pred EEEEeecC-CCC--CCCCCCCCCCCCCCEEEEecCCcceeeeecccccc------CCC------CCCccEEEEcCCCcEE
Q 014257 250 SCIVNIYE-EGD--CIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVV------GAG------EFAGSIPIALPVGSVL 314 (428)
Q Consensus 250 q~iVN~Y~-pG~--gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~------~~g------~~~~~~~V~Lp~GSLL 314 (428)
.+.+|.|- +++ ++++|.|.+. .|+.==.|.. .+.+....... ... .......+.|.+|++|
T Consensus 163 ~v~~N~Y~tp~Gs~g~~pH~D~~D---vFllQv~G~K-rWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvL 238 (489)
T 4diq_A 163 MAGSNVYLTPPNSQGFAPHYDDIE---AFVLQLEGRK-LWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLL 238 (489)
T ss_dssp CEEEEEEEECSSBCCSCCBCCSSE---EEEEEEEECE-EEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEE
T ss_pred cccceEEecCCCcccccCccCCcc---eEEEEEeeEE-EEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEE
Confidence 46788893 333 7889999975 1221113333 33333211000 000 1234678999999999
Q ss_pred EeccccccccccccCCC-CCCeEEEEeeec
Q 014257 315 VLNGNAADVAKHCVPAV-PTKRISITFRKM 343 (428)
Q Consensus 315 VMsGesRy~wkH~Ip~~-r~~RISLTFR~v 343 (428)
.|-- .|-|.+... .+.-++|||--.
T Consensus 239 YiP~----g~~H~~~s~~~~~SlhlTi~~~ 264 (489)
T 4diq_A 239 YFPR----GFIHQAECQDGVHSLHLTLSTY 264 (489)
T ss_dssp EECT----TCEEEEEBCSSCCEEEEEEEEC
T ss_pred EECC----CCceEEEecCCCceEEEeeccc
Confidence 9987 456766654 467788888643
No 19
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=53.66 E-value=8.1 Score=37.50 Aligned_cols=81 Identities=17% Similarity=0.128 Sum_probs=51.9
Q ss_pred CCEEEEeecCC-------C--C-CCCCCCCCCCCCCCEEEEecCC--cce---eeeeccccccCCCCCCccEEEEcCCCc
Q 014257 248 PDSCIVNIYEE-------G--D-CIPPHIDNHDFVRPFCTVSFLS--ECN---IVFGSNLKVVGAGEFAGSIPIALPVGS 312 (428)
Q Consensus 248 PDq~iVN~Y~p-------G--~-gI~pHvD~~~f~~pI~SLSLGS--~~v---m~F~~~~~~~~~g~~~~~~~V~Lp~GS 312 (428)
...+-+|+|.+ | . ++++|.|.. +++|-+-. ..- +.... .+.-+.|.-.+|+
T Consensus 156 ~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~v~G~~~LqV~~---------~g~W~~V~p~pg~ 221 (311)
T 1dcs_A 156 EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLS-----MVTLIQQTPCANGFVSLQAEV---------GGAFTDLPYRPDA 221 (311)
T ss_dssp CCEEEEEEECC-----------CCEEEEEECS-----SEEEEEEECCTTCCCCEEEEE---------TTEEEECCCCTTC
T ss_pred chhhheecCCCCCcccccCccccccccccCCC-----eEEEEecCCCCCCceeEEEEe---------CCEEEeCcCCCCe
Confidence 35678999975 2 2 488999983 33332221 011 33331 2357888889999
Q ss_pred EEEeccccccccccc--------cCC-C-----CCCeEEEEeee
Q 014257 313 VLVLNGNAADVAKHC--------VPA-V-----PTKRISITFRK 342 (428)
Q Consensus 313 LLVMsGesRy~wkH~--------Ip~-~-----r~~RISLTFR~ 342 (428)
++|.-|+.-..|+.+ |-. . ...|+||.|-.
T Consensus 222 lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~ 265 (311)
T 1dcs_A 222 VLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFL 265 (311)
T ss_dssp EEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEE
T ss_pred EEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEE
Confidence 999999998888654 321 2 45699999964
No 20
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=49.10 E-value=12 Score=36.62 Aligned_cols=80 Identities=20% Similarity=0.087 Sum_probs=51.9
Q ss_pred EEE--EeecC------C----------CCCCCCCCCCCCCCCCEEEEecCCc-ceeeeeccccccCCCCCCccEEEEcCC
Q 014257 250 SCI--VNIYE------E----------GDCIPPHIDNHDFVRPFCTVSFLSE-CNIVFGSNLKVVGAGEFAGSIPIALPV 310 (428)
Q Consensus 250 q~i--VN~Y~------p----------G~gI~pHvD~~~f~~pI~SLSLGS~-~vm~F~~~~~~~~~g~~~~~~~V~Lp~ 310 (428)
.+- +|+|. + .-++++|.|.. +.+|-+-.. .-+.... ..+ -+.|.-.+
T Consensus 181 ~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g-----~lTlL~qd~v~GLQV~~--------~~g-Wi~V~p~p 246 (331)
T 1odm_A 181 LASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVS-----LITVLYQSNVQNLQVET--------AAG-YQDIEADD 246 (331)
T ss_dssp CCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSS-----SEEEEEECSSCCEEEEE--------TTE-EEECCCCT
T ss_pred HHHHHHhhCCCcccccccccCCCccccccccccccCCC-----eEEEEeeCCCCCEEEEc--------CCC-eEECCCCC
Confidence 445 99998 5 12688999983 444422221 1233331 123 78888899
Q ss_pred CcEEEeccccccccccc--------cCCCCCCeEEEEeeec
Q 014257 311 GSVLVLNGNAADVAKHC--------VPAVPTKRISITFRKM 343 (428)
Q Consensus 311 GSLLVMsGesRy~wkH~--------Ip~~r~~RISLTFR~v 343 (428)
|+++|.-|+.-..|+.+ |-.....|+||.|-.-
T Consensus 247 galvVNiGD~l~~~TnG~~kS~~HRVv~~~~~R~Sia~F~~ 287 (331)
T 1odm_A 247 TGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFFVN 287 (331)
T ss_dssp TSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEEEC
T ss_pred CeEEEEccHHHHHHhCCEeeCCCceeCCCCCCEEEEEEEEc
Confidence 99999999998888654 3223667999999643
No 21
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=41.28 E-value=30 Score=32.32 Aligned_cols=45 Identities=20% Similarity=0.331 Sum_probs=34.3
Q ss_pred ccEEEEcCCCcEEEeccccccccccccCC--CCCCeEEEEeeeccCCCCCCCC
Q 014257 302 GSIPIALPVGSVLVLNGNAADVAKHCVPA--VPTKRISITFRKMDESKRPFGF 352 (428)
Q Consensus 302 ~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~--~r~~RISLTFR~v~~~~c~c~~ 352 (428)
..+.+.+++||++|+.+.. -|+-.+ ....|++++||.+... .|.|
T Consensus 226 ~~v~~~~~aGd~~~f~~~~----~H~s~~N~s~~~R~~~~~~~~~~~--~~~~ 272 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEV----VHKSKQNLSDRSRQAYTFHLMEAS--GTTW 272 (291)
T ss_dssp GCEEECBCTTCEEEEETTC----EEEECCBCSSSCCCEEEEEEEECT--TCEE
T ss_pred CeeecccCCCcEEEEcCCc----eecCCCCCCCCceEEEEEEEEcCC--CCcc
Confidence 4678999999999999953 377543 3568999999988764 4455
No 22
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=31.30 E-value=56 Score=29.90 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=55.0
Q ss_pred CCEEEEeecCCCCCCCCCCCCCC-CCCCEEEEecCC-cceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccccccc
Q 014257 248 PDSCIVNIYEEGDCIPPHIDNHD-FVRPFCTVSFLS-ECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAK 325 (428)
Q Consensus 248 PDq~iVN~Y~pG~gI~pHvD~~~-f~~pI~SLSLGS-~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wk 325 (428)
.-++.+....||..|.||.|... .-..-+.|-.-. .|.|..+. .......|.++|+.. .+.
T Consensus 101 ~~~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~-------------~~~~w~eGe~~~fDd----s~~ 163 (197)
T 3rcq_A 101 RGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCAN-------------ETKTWEEGKVLIFDD----SFE 163 (197)
T ss_dssp TCEEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEETT-------------EEECCCBTCEEEECT----TSC
T ss_pred cceEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEECC-------------EEEEeeCCcEEEEcC----CeE
Confidence 34889999999999999999854 222222332223 45565542 356788899999987 345
Q ss_pred ccc-CCCCCCeEEEEeeeccC
Q 014257 326 HCV-PAVPTKRISITFRKMDE 345 (428)
Q Consensus 326 H~I-p~~r~~RISLTFR~v~~ 345 (428)
|.+ ....+.||.|.|--.++
T Consensus 164 Hev~N~~d~~RvvL~~D~~rP 184 (197)
T 3rcq_A 164 HEVWQDASSFRLIFIVDVWHP 184 (197)
T ss_dssp EEEEECSSSCEEEEEEEEECT
T ss_pred EEEEECCCCCEEEEEEeeeCC
Confidence 654 44688999999976555
No 23
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=25.62 E-value=94 Score=24.79 Aligned_cols=70 Identities=20% Similarity=0.201 Sum_probs=42.1
Q ss_pred EEEEeecCCCCCCCCCCCCCCCCCCEEEEecCCcceeeeeccccccCCCCCCccEEEEcCCCcEEEeccccccccccccC
Q 014257 250 SCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKVVGAGEFAGSIPIALPVGSVLVLNGNAADVAKHCVP 329 (428)
Q Consensus 250 q~iVN~Y~pG~gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~~~~~~g~~~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip 329 (428)
.+..-.+.+|..+++|.-. ....++.| -....+.+.. ....|++|+++++..... |.+.
T Consensus 37 ~v~~~~l~~G~~~~~H~H~--~~e~~~Vl--~G~~~~~i~~-------------~~~~l~~Gd~i~ip~~~~----H~~~ 95 (114)
T 3fjs_A 37 EVMRMVLPAGKQVGSHSVA--GPSTIQCL--EGEVEIGVDG-------------AQRRLHQGDLLYLGAGAA----HDVN 95 (114)
T ss_dssp EEEEEEECTTCEEEEECCS--SCEEEEEE--ESCEEEEETT-------------EEEEECTTEEEEECTTCC----EEEE
T ss_pred EEEEEEECCCCccCceeCC--CcEEEEEE--ECEEEEEECC-------------EEEEECCCCEEEECCCCc----EEEE
Confidence 4445567899999998543 33333333 2333444331 257899999999999764 5554
Q ss_pred CCCCCeEEEEe
Q 014257 330 AVPTKRISITF 340 (428)
Q Consensus 330 ~~r~~RISLTF 340 (428)
.....++-+++
T Consensus 96 ~~~~~~~~~~~ 106 (114)
T 3fjs_A 96 AITNTSLLVTV 106 (114)
T ss_dssp ESSSEEEEEEE
T ss_pred eCCCcEEEEEE
Confidence 44444554444
No 24
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=25.05 E-value=3.6e+02 Score=26.13 Aligned_cols=37 Identities=24% Similarity=0.254 Sum_probs=29.4
Q ss_pred CccEEEEcCCCcEEEeccccccccccccCCC-CCCeEEEEee
Q 014257 301 AGSIPIALPVGSVLVLNGNAADVAKHCVPAV-PTKRISITFR 341 (428)
Q Consensus 301 ~~~~~V~Lp~GSLLVMsGesRy~wkH~Ip~~-r~~RISLTFR 341 (428)
.....+.|.+|++|.|-- .|-|.+... .+.-++|||+
T Consensus 215 ~~~~~~~L~pGD~LyiP~----gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPR----GLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp CSSEEEEECTTCEEEECT----TCEEEEECSSCEEEEEEEEC
T ss_pred CCceEEEECCCcEEEeCC----CccEEEEECCCCceEEEEEC
Confidence 346889999999999986 566887766 3578899998
No 25
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=21.22 E-value=1.6e+02 Score=29.98 Aligned_cols=87 Identities=15% Similarity=0.135 Sum_probs=48.1
Q ss_pred EEEEeecC-CCC--CCCCCCCCCCCCCCEEEEecCCcceeeeeccc------cccCCCC-CCccEEEEcCCCcEEEeccc
Q 014257 250 SCIVNIYE-EGD--CIPPHIDNHDFVRPFCTVSFLSECNIVFGSNL------KVVGAGE-FAGSIPIALPVGSVLVLNGN 319 (428)
Q Consensus 250 q~iVN~Y~-pG~--gI~pHvD~~~f~~pI~SLSLGS~~vm~F~~~~------~~~~~g~-~~~~~~V~Lp~GSLLVMsGe 319 (428)
.+.+|.|- +++ ++++|.|.+. .++.-=-|..+...|.... ..+.+.+ ......+.|.+|++|.|--
T Consensus 138 ~~~~n~y~~~~g~~g~~~H~D~~d---vf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~- 213 (442)
T 2xdv_A 138 LVGSNVYITPAGSQGLPPHYDDVE---VFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPR- 213 (442)
T ss_dssp CCEEEEEEECTTCBCSCSEECSSE---EEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECT-
T ss_pred CcccceEECCCCCCCccceECCcc---eEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECC-
Confidence 35688884 333 5679999864 2222223443333332210 0000000 1245789999999999976
Q ss_pred cccccccccCCCC--CCeEEEEeeec
Q 014257 320 AADVAKHCVPAVP--TKRISITFRKM 343 (428)
Q Consensus 320 sRy~wkH~Ip~~r--~~RISLTFR~v 343 (428)
.|-|.+.... ..-+.|||-..
T Consensus 214 ---g~~H~~~s~~~~~~SlhlT~~~~ 236 (442)
T 2xdv_A 214 ---GTIHQADTPAGLAHSTHVTISTY 236 (442)
T ss_dssp ---TCEEEEECCSSSCCEEEEEEEEC
T ss_pred ---CceEEEEecCCCcceeecccccc
Confidence 5667766543 45677787653
Done!