Query 014263
Match_columns 427
No_of_seqs 181 out of 1538
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 03:26:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014263.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014263hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 8.1E-47 1.8E-51 355.2 21.7 297 21-341 9-331 (379)
2 PLN03145 Protein phosphatase 2 100.0 5.9E-43 1.3E-47 353.7 29.9 247 32-300 63-332 (365)
3 KOG0698 Serine/threonine prote 100.0 8.7E-42 1.9E-46 342.3 29.3 260 29-302 38-308 (330)
4 PTZ00224 protein phosphatase 2 100.0 5.1E-40 1.1E-44 333.5 29.5 241 26-300 14-273 (381)
5 PF00481 PP2C: Protein phospha 100.0 4.6E-40 9.9E-45 318.1 16.2 229 38-290 7-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 1.2E-38 2.6E-43 310.0 23.2 229 41-300 19-254 (262)
7 cd00143 PP2Cc Serine/threonine 100.0 7E-35 1.5E-39 278.4 26.9 236 39-297 9-254 (254)
8 smart00332 PP2Cc Serine/threon 100.0 1.7E-33 3.6E-38 269.9 27.8 232 39-295 14-255 (255)
9 PRK14559 putative protein seri 100.0 8.7E-34 1.9E-38 303.0 25.3 233 41-298 386-635 (645)
10 KOG0699 Serine/threonine prote 100.0 3.3E-33 7.1E-38 271.2 19.7 154 129-298 328-503 (542)
11 KOG0700 Protein phosphatase 2C 100.0 3.2E-32 7E-37 270.2 18.0 228 41-282 81-376 (390)
12 KOG1323 Serine/threonine phosp 99.9 1.1E-22 2.5E-27 196.3 21.2 232 64-299 142-488 (493)
13 KOG1379 Serine/threonine prote 99.9 5.2E-21 1.1E-25 184.9 20.6 208 41-297 87-330 (330)
14 PF13672 PP2C_2: Protein phosp 99.8 3.5E-19 7.7E-24 166.9 13.8 182 36-266 3-193 (212)
15 KOG0618 Serine/threonine phosp 99.8 2.3E-18 5.1E-23 185.2 15.6 218 64-301 549-775 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.7 1.3E-15 2.7E-20 140.8 19.4 174 41-281 13-192 (193)
17 TIGR02865 spore_II_E stage II 99.6 8.6E-14 1.9E-18 153.7 21.0 200 31-298 549-764 (764)
18 PF07228 SpoIIE: Stage II spor 99.4 1.8E-11 3.9E-16 112.7 18.3 174 64-297 2-192 (193)
19 COG2208 RsbU Serine phosphatas 98.3 8.7E-05 1.9E-09 75.8 20.2 186 44-298 161-366 (367)
20 PF07830 PP2C_C: Protein serin 82.1 0.61 1.3E-05 37.4 0.9 56 291-349 1-59 (81)
21 PF10764 Gin: Inhibitor of sig 64.3 2.5 5.4E-05 30.1 0.3 27 370-411 1-27 (46)
22 PF09436 DUF2016: Domain of un 54.2 7.2 0.00016 30.5 1.3 24 237-260 23-46 (72)
23 cd00085 HNHc HNH nucleases; HN 50.0 4.1 8.8E-05 28.8 -0.7 43 369-412 12-56 (57)
24 TIGR02573 LcrG_PcrG type III s 48.9 8.6 0.00019 31.1 1.0 11 416-426 75-85 (90)
25 KOG2893 Zn finger protein [Gen 47.2 8.5 0.00018 36.9 0.9 23 366-388 32-54 (341)
26 PF07216 LcrG: LcrG protein; 32.6 22 0.00048 29.0 1.0 11 416-426 78-88 (93)
27 COG2174 RPL34A Ribosomal prote 29.4 29 0.00063 28.3 1.2 42 366-411 32-80 (93)
28 COG2168 DsrH Uncharacterized c 27.8 44 0.00095 27.6 2.0 51 239-292 23-73 (96)
29 PHA02565 49 recombination endo 27.0 47 0.001 30.0 2.2 37 370-410 22-63 (157)
30 KOG1829 Uncharacterized conser 25.8 23 0.0005 38.5 0.0 56 341-411 320-375 (580)
31 PF14471 DUF4428: Domain of un 23.7 19 0.00042 26.1 -0.7 30 370-412 1-30 (51)
32 cd00350 rubredoxin_like Rubred 22.8 44 0.00095 21.7 0.9 15 401-415 16-30 (33)
33 KOG4628 Predicted E3 ubiquitin 21.3 44 0.00096 34.1 1.0 43 369-411 230-276 (348)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-47 Score=355.18 Aligned_cols=297 Identities=26% Similarity=0.416 Sum_probs=249.1
Q ss_pred cceeeccccCCCeeeEeecC---CCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHh-C
Q 014263 21 GRELRNEKIEKPFVKYGQAA---LAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSA-I 96 (427)
Q Consensus 21 ~~~~~~~~~~~~~~~~G~~~---~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~-~ 96 (427)
++|+.+...+-+.+.||.++ +|-.+||++.....+ | ++-.+|++|+|||||.|+..|.+++++|++.+++. -
T Consensus 9 kteKhn~~G~GNglryg~SSMQGWR~eMEDah~A~~~l---~-~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~ 84 (379)
T KOG0697|consen 9 KTEKHNAEGEGNGLRYGVSSMQGWRVEMEDAHTAVAGL---P-SPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEE 84 (379)
T ss_pred ccccccccCcCCceeeeeccccchhhhhhhhhhhhhcC---C-CCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHH
Confidence 34677778888999999866 899999999988763 2 45578999999999999999999999999999776 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhHHHHhc------CCCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccC
Q 014263 97 PQGASRDEWLQALPRALVAGFVKTDIEFQKK------GETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVD 170 (427)
Q Consensus 97 ~~~~~~~~~~~~i~~al~~af~~~d~~~~~~------~~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~D 170 (427)
........-.+.+...|+.+|.++|..++.. ..++|||++.+++...++|++|+||||++++ |+|....-|.|
T Consensus 85 F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~-rng~~~f~TqD 163 (379)
T KOG0697|consen 85 FRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLC-RNGEVVFSTQD 163 (379)
T ss_pred HhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhhee-cCCceEEeccC
Confidence 1111111234578889999999999877653 3569999999999999999999999999999 99999999999
Q ss_pred CCCCCCHHHHHHHHhcCCcc--ceecccCCCccccccccCCCcccccccCCCCcc---------ccccccceEEEEEecC
Q 014263 171 HRLEENAEERERVTASGGEV--GRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVG---------EFIVPIPHVKQVKLSN 239 (427)
Q Consensus 171 H~~~~~~~E~~rI~~~Gg~v--~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k---------~~i~a~P~v~~~~l~~ 239 (427)
|.+. ++.|++||+.+||.| .|+| |.+++||+|||++|| ++++|+|+|..+..+.
T Consensus 164 HKP~-~p~EkeRIqnAGGSVMIqRvN--------------GsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~e 228 (379)
T KOG0697|consen 164 HKPY-LPKEKERIQNAGGSVMIQRVN--------------GSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSE 228 (379)
T ss_pred CCCC-ChHHHHHHhcCCCeEEEEEec--------------ceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccc
Confidence 9995 999999999999997 5777 999999999999997 5799999999999988
Q ss_pred CCcEEEEEecCCcccCChHHHHHHhcCC-----CHHHHHHHHHHHHHhcCCCCCCeEEEEEEecCCCCCCCCCCchhhHH
Q 014263 240 AGGRLIIASDGIWDALTSDMAAKSCRGL-----PAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVPAPTPRKKQN 314 (427)
Q Consensus 240 ~gd~LILaSDGvwd~ls~~ei~~i~~~~-----~~~~~a~~Lv~~Al~~~G~~DNiTvIvv~l~~~~~~~~~~~~~~k~~ 314 (427)
.++|||||+|||||+++++|+.++++.. ++..+|+.+++.+|- +|++||||+|+|.|... |++.+.++|++.
T Consensus 229 edeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLh-KGSRDNMsivlvcfp~A--Pkv~~eavkae~ 305 (379)
T KOG0697|consen 229 EDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLH-KGSRDNMSIVLVCFPGA--PKVSIEAVKAEE 305 (379)
T ss_pred cCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHh-ccCccCceEEEEecCCC--CCCCHHHHHHHH
Confidence 8999999999999999999999996543 999999999999997 99999999999999444 567777777877
Q ss_pred HHHhhhhhcccccccccccccCccchh
Q 014263 315 VLSSLIFGKKAHDSMKTSNKLAAVGVV 341 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
.|...|-.+ .++....+..-+++|+|
T Consensus 306 ~ldk~ie~~-~~e~iek~~~~~~~dlv 331 (379)
T KOG0697|consen 306 RLDKVIEQI-TEEIIEKSGIKDEEDLV 331 (379)
T ss_pred HHHHHHHHH-HHHHHHhccccCcHHHH
Confidence 777764443 34444444445666664
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=5.9e-43 Score=353.65 Aligned_cols=247 Identities=27% Similarity=0.408 Sum_probs=199.3
Q ss_pred CeeeEeec---CCCCCCcccEEeccCCcC---CCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHH
Q 014263 32 PFVKYGQA---ALAKKGEDYFLIKPDCQR---IPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEW 105 (427)
Q Consensus 32 ~~~~~G~~---~~r~~nEDa~~v~~~~~~---~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~ 105 (427)
+.+.+|.. |.|+.|||++++...+.. .+........+|||||||||+.+|++|++++.+.+.+.. . .
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~--~-----~ 135 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDE--D-----F 135 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhh--c-----c
Confidence 44566654 479999999987654211 011112346899999999999999999999999987641 1 1
Q ss_pred HHHHHHHHHHHHHHhhHHHHhc-----CCCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHH
Q 014263 106 LQALPRALVAGFVKTDIEFQKK-----GETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEER 180 (427)
Q Consensus 106 ~~~i~~al~~af~~~d~~~~~~-----~~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~ 180 (427)
...+.++|.++|..++..+... ...+|||+++++|.++++|++|+||||+|++ ++|++.+||.||++. +..|+
T Consensus 136 ~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~-r~g~~~~LT~DH~~~-~~~E~ 213 (365)
T PLN03145 136 PREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLC-RRGKAIEMSRDHKPM-CSKER 213 (365)
T ss_pred chhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEE-cCCeEEEecCCCCCC-CHHHH
Confidence 1245677888898888887653 2358999999999999999999999999999 999999999999995 78899
Q ss_pred HHHHhcCCccceecccCCCccccccccCCCcccccccCCCCccc-------cccccceEEEEEecCCCcEEEEEecCCcc
Q 014263 181 ERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGE-------FIVPIPHVKQVKLSNAGGRLIIASDGIWD 253 (427)
Q Consensus 181 ~rI~~~Gg~v~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~-------~i~a~P~v~~~~l~~~gd~LILaSDGvwd 253 (427)
+||...||.+..- + .++.+++||+|||..++. .++++|++..+++...+.|||||||||||
T Consensus 214 ~RI~~~Gg~v~~g-----------~-v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwd 281 (365)
T PLN03145 214 KRIEASGGYVYDG-----------Y-LNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWD 281 (365)
T ss_pred HHHHHcCCceecc-----------e-ECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCcccc
Confidence 9999999988421 1 236778999999987753 36789999999996667788999999999
Q ss_pred cCChHHHHHHhc----C-CCHHHHHHHHHHHHHhcCCCCCCeEEEEEEecCC
Q 014263 254 ALTSDMAAKSCR----G-LPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPS 300 (427)
Q Consensus 254 ~ls~~ei~~i~~----~-~~~~~~a~~Lv~~Al~~~G~~DNiTvIvv~l~~~ 300 (427)
++++++++++++ . .+++.+|+.|++.|+. +|+.||+|||||+|.+.
T Consensus 282 vls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~-rgs~DNITvIVV~l~~~ 332 (365)
T PLN03145 282 VFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK-RKSGDNLAVVVVCFQSQ 332 (365)
T ss_pred CcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh-CCCCCCEEEEEEEeecC
Confidence 999999876643 3 3899999999999998 89999999999999653
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-42 Score=342.29 Aligned_cols=260 Identities=35% Similarity=0.532 Sum_probs=218.2
Q ss_pred cCCCeeeEeecCCCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHH
Q 014263 29 IEKPFVKYGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQA 108 (427)
Q Consensus 29 ~~~~~~~~G~~~~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~ 108 (427)
.......+...+.+..+||++.....+............+|||||||||..+|+|+.++|+..+.+........ ..
T Consensus 38 ~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~----~~ 113 (330)
T KOG0698|consen 38 SYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDR----QD 113 (330)
T ss_pred cccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccch----HH
Confidence 34444555667788999999999988665444444468999999999999999999999999999884433332 45
Q ss_pred HHHHHHHHHH-HhhHHHHhc---CCCCCceEEEEEEe-CCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHH
Q 014263 109 LPRALVAGFV-KTDIEFQKK---GETSGTTVTFVVID-GWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERV 183 (427)
Q Consensus 109 i~~al~~af~-~~d~~~~~~---~~~sGtT~~~viI~-~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI 183 (427)
+..++.++|. .+|..+... ...+|||++++++. +.++||||+|||||+|+++++.+.+||.||++. ...|+.||
T Consensus 114 ~~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~-~~~E~~RI 192 (330)
T KOG0698|consen 114 VKDALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPD-REDERERI 192 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCC-cHHHHHHH
Confidence 6788889999 699998875 46788888888887 459999999999999994444899999999996 79999999
Q ss_pred HhcCCccceecccCCCccccccccCCCcccccccCCCCcc-ccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHH
Q 014263 184 TASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVG-EFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAK 262 (427)
Q Consensus 184 ~~~Gg~v~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k-~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~ 262 (427)
+.+||+|.... |..|+| |.+++||+|||..+| +.++++|++....++..++||||+||||||.++++|+++
T Consensus 193 ~~~GG~v~~~~-------~~~Rv~-G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~ 264 (330)
T KOG0698|consen 193 EAAGGRVSNWG-------GVWRVN-GVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVD 264 (330)
T ss_pred HHcCCEEEEcC-------CcceEe-ceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHH
Confidence 99999997543 223332 689999999999999 889999999999997779999999999999999999999
Q ss_pred HhcC----C-CHHHHHHHHHHHHHhcCCCCCCeEEEEEEecCCCC
Q 014263 263 SCRG----L-PAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDH 302 (427)
Q Consensus 263 i~~~----~-~~~~~a~~Lv~~Al~~~G~~DNiTvIvv~l~~~~~ 302 (427)
+++. . .+..++..+.+.|+. +|+.||+|||||+|.+...
T Consensus 265 ~V~~~~~~~~~~~~a~~~l~~~a~~-~~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 265 LVRDELASISSPLAAAKLLATEALS-RGSKDNITVVVVRLKSSPK 308 (330)
T ss_pred HHHHHhhccccHHHHHHHHHHHHhh-cCCCCCeEEEEEEecCccc
Confidence 9776 3 889999999999998 9999999999999976654
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=5.1e-40 Score=333.51 Aligned_cols=241 Identities=26% Similarity=0.445 Sum_probs=197.5
Q ss_pred ccccCCCeeeEeec---CCCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCCh
Q 014263 26 NEKIEKPFVKYGQA---ALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASR 102 (427)
Q Consensus 26 ~~~~~~~~~~~G~~---~~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~ 102 (427)
++...+..+.+|.+ |.|++|||++++... ..+.+|||||||||..+|+++++.+.+.+.+. .....
T Consensus 14 ~~~~~~~~~~~g~~s~~G~R~~nED~~~v~~~---------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~-~~~~~- 82 (381)
T PTZ00224 14 VDRAGNSIFRCASACVNGYRESMEDAHLLYLT---------DDWGFFGVFDGHVNDECSQYLARAWPQALEKE-PEPMT- 82 (381)
T ss_pred cccCCCccEEEEEEeCCCCCCCCCCeeEeccC---------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhc-ccccc-
Confidence 34456677777764 489999999886533 24579999999999999999999998766543 22111
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHhcCCCCCceEEEEEEe-CCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHH
Q 014263 103 DEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVID-GWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERE 181 (427)
Q Consensus 103 ~~~~~~i~~al~~af~~~d~~~~~~~~~sGtT~~~viI~-~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~ 181 (427)
.+.|.++|..+|..+......+|||+++++|. +.+++|+||||||+|++ ++|++.+||.||++. +..|++
T Consensus 83 -------~~~l~~a~~~~d~~i~~~~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~-r~g~~~~LT~DH~~~-~~~E~~ 153 (381)
T PTZ00224 83 -------DERMEELCLEIDEEWMDSGREGGSTGTFCVIMKDVHLQVGNVGDSRVLVC-RDGKLVFATEDHKPN-NPGERQ 153 (381)
T ss_pred -------HHHHHHHHHHHHHHHHhcccCCCCeEEEEEEEECCEEEEEEcccceEEEE-ECCEEEEcccCCCCC-CHHHHh
Confidence 23477788888888877666789999998876 68999999999999999 999999999999985 777999
Q ss_pred HHHhcCCccceecccCCCccccccccCCCcccccccCCCCcc---------ccccccceEEEEEecCCCcEEEEEecCCc
Q 014263 182 RVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVG---------EFIVPIPHVKQVKLSNAGGRLIIASDGIW 252 (427)
Q Consensus 182 rI~~~Gg~v~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k---------~~i~a~P~v~~~~l~~~gd~LILaSDGvw 252 (427)
||+..||.+... | ..|.+.+||+|||..+| +.++++|++..+++ .++|+|||||||||
T Consensus 154 RI~~~gg~v~~~-----------R-v~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l-~~~D~llLaSDGL~ 220 (381)
T PTZ00224 154 RIEACGGRVVSN-----------R-VDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTC-QSNDFIILACDGVF 220 (381)
T ss_pred HHHHccCEeccc-----------c-ccCceeeecccCCcccccccccccccCcceeeeEEEEEEC-CCCCEEEEECCCcC
Confidence 999999987421 1 12678999999997643 23678999999999 78999999999999
Q ss_pred c-cCChHHHHHHhc-----CCCHHHHHHHHHHHHHhcCCCCCCeEEEEEEecCC
Q 014263 253 D-ALTSDMAAKSCR-----GLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPS 300 (427)
Q Consensus 253 d-~ls~~ei~~i~~-----~~~~~~~a~~Lv~~Al~~~G~~DNiTvIvv~l~~~ 300 (427)
| +++++++.++++ ..+++.+|+.|++.|+. +|+.||+|||||+|...
T Consensus 221 d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~-rGs~DNITvIvV~~~~~ 273 (381)
T PTZ00224 221 EGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIR-RGSKDNISCLIVQLKDG 273 (381)
T ss_pred cCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh-cCCCCCEEEEEEEeeCC
Confidence 9 799999999875 34899999999999998 99999999999999544
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=4.6e-40 Score=318.11 Aligned_cols=229 Identities=34% Similarity=0.533 Sum_probs=183.7
Q ss_pred ecCCCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHH
Q 014263 38 QAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGF 117 (427)
Q Consensus 38 ~~~~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af 117 (427)
..+.|++|||++++....... .+.....+|+|||||||..+|.++++.+...+.......... .+.++|..+|
T Consensus 7 ~~g~r~~~eD~~~~~~~~~~~--~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~-----~~~~al~~a~ 79 (254)
T PF00481_consen 7 MQGVRKEMEDRHLIIQNFNSN--SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGN-----DIEEALRQAF 79 (254)
T ss_dssp EECTSSSHHEEEEEEEEETCC--TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCH-----HHHHHHHHHH
T ss_pred CCCCCCcccCEEEEecCcccc--CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhccccccc-----chhhccccee
Confidence 356899999999998753222 234578999999999999999999999997776662211111 5677888888
Q ss_pred HH-hhHHHHh-----cCCCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeE-EcccCCCCCCCHHHHHHHHhcCCcc
Q 014263 118 VK-TDIEFQK-----KGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVS-LLTVDHRLEENAEERERVTASGGEV 190 (427)
Q Consensus 118 ~~-~d~~~~~-----~~~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~-~LT~DH~~~~~~~E~~rI~~~Gg~v 190 (427)
.. ++..+.. ....+|||+++++|.++++|+||+||||+|++ +.+... +||.||++. ++.|+.||..+||.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~-~~~~~~~~Lt~dH~~~-~~~E~~RI~~~gg~v 157 (254)
T PF00481_consen 80 LAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLC-RNGGIIKQLTRDHKPS-NPDERERIRKAGGRV 157 (254)
T ss_dssp HHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEE-ETTEEEEESS---STT-SHHHHHHHHHTT-GE
T ss_pred eecccccccccccccccccccccccccccccceeEEEeeeeeeeeee-eccccccccccccccc-hhhccceeecccccc
Confidence 88 7776664 45789999999999999999999999999999 777776 999999995 899999999999998
Q ss_pred ce---ecccCCCccccccccCCCcccccccCCCCccc----cccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHH
Q 014263 191 GR---LNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGE----FIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKS 263 (427)
Q Consensus 191 ~~---~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~----~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i 263 (427)
.. ++ +.+++||+|||..+++ .++++|++..+++++.+.|||||||||||++++++++++
T Consensus 158 ~~~~rv~--------------g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~ 223 (254)
T PF00481_consen 158 SENGRVN--------------GVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDI 223 (254)
T ss_dssp EETEEET--------------TTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHH
T ss_pred ccchhhh--------------hccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHH
Confidence 63 33 6689999999999998 799999999999966667999999999999999999999
Q ss_pred hcCC-C----HHHHHHHHHHHHHhcCCCCCCe
Q 014263 264 CRGL-P----AELAAKLVVKEALRSRGLKDDT 290 (427)
Q Consensus 264 ~~~~-~----~~~~a~~Lv~~Al~~~G~~DNi 290 (427)
++.. + |+.+|+.|++.|+. +|+.|||
T Consensus 224 v~~~~~~~~~~~~~a~~L~~~A~~-~gs~DNi 254 (254)
T PF00481_consen 224 VRESLNSGRSPQEAAEKLVDEAIA-RGSKDNI 254 (254)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHH-TTHHSHE
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHh-cCCCCCC
Confidence 7765 3 89999999999998 9999996
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=310.01 Aligned_cols=229 Identities=28% Similarity=0.442 Sum_probs=190.3
Q ss_pred CCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHHh
Q 014263 41 LAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKT 120 (427)
Q Consensus 41 ~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af~~~ 120 (427)
.|..|||++.+... .+... ..+|+|||||||++++++|++.+++.+.+.+....... ....+.+.|.+++..+
T Consensus 19 ~R~~NeD~~~~~~~-----~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~-~~~~~~~~l~~~~~~~ 91 (262)
T COG0631 19 VRKHNEDAFLIKPN-----ENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNS-LNESLEELLKEAILKA 91 (262)
T ss_pred ccCCCCcceeeccc-----cCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccc-cchhHHHHHHHHHHHH
Confidence 78899999999864 22223 67999999999999999999999999988844432211 1111556666666666
Q ss_pred hHHHHhcC------CCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCccceec
Q 014263 121 DIEFQKKG------ETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLN 194 (427)
Q Consensus 121 d~~~~~~~------~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~~~ 194 (427)
+..+.... ..+|||++++++.++++|+|||||||+|++ ++|.+++||.||++. +..++.++...
T Consensus 92 n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~-~~~~~~~lT~DH~~~-~~~~~~~~~~~-------- 161 (262)
T COG0631 92 NEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLL-RDGELKQLTEDHSLV-NRLEQRGIITP-------- 161 (262)
T ss_pred HHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEE-cCCceEEeccCCcHH-HHHHHhcCCCH--------
Confidence 66665532 689999999999999999999999999999 999999999999996 55565554443
Q ss_pred ccCCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcC-CCHHHHH
Q 014263 195 VFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRG-LPAELAA 273 (427)
Q Consensus 195 ~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~-~~~~~~a 273 (427)
++++.||..+.+||+||+... .+|++..+++ +++++||||||||||.++++++.++++. .+++.++
T Consensus 162 -------~~~~~~~~~~~ltralG~~~~-----~~p~~~~~~~-~~~d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~ 228 (262)
T COG0631 162 -------EEARSHPRRNALTRALGDFDL-----LEPDITELEL-EPGDFLLLCSDGLWDVVSDDEIVDILKNSETPQEAA 228 (262)
T ss_pred -------HHHHhCccchhhhhhcCCCcc-----cceeEEEEEc-CCCCEEEEECCCCccCcCHHHHHHHHhcCCCHHHHH
Confidence 456778899999999999975 6899999999 7779999999999999999999999985 6999999
Q ss_pred HHHHHHHHhcCCCCCCeEEEEEEecCC
Q 014263 274 KLVVKEALRSRGLKDDTTCLVVDIIPS 300 (427)
Q Consensus 274 ~~Lv~~Al~~~G~~DNiTvIvv~l~~~ 300 (427)
+++++.|+. +|+.||+|+|+|.+...
T Consensus 229 ~~li~~a~~-~g~~DNiT~ilv~~~~~ 254 (262)
T COG0631 229 DKLIELALE-GGGPDNITVVLVRLNGE 254 (262)
T ss_pred HHHHHHHHh-cCCCCceEEEEEEeecc
Confidence 999999998 99999999999999644
No 7
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=7e-35 Score=278.36 Aligned_cols=236 Identities=36% Similarity=0.530 Sum_probs=198.5
Q ss_pred cCCCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHH
Q 014263 39 AALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFV 118 (427)
Q Consensus 39 ~~~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af~ 118 (427)
.+.|+.|||++++.... .. .++.+|+|||||||...+.++++.+.+.+...+..... .....+...|..+|.
T Consensus 9 ~g~r~~neD~~~~~~~~-----~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~--~~~~~~~~~l~~~~~ 80 (254)
T cd00143 9 GGDRKTNEDAVVIKPNL-----NN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLT--LSEEDIEEALRKAFL 80 (254)
T ss_pred CCCCCCCcceEEEeccC-----CC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccc--cchHHHHHHHHHHHH
Confidence 34688999999987651 00 25789999999999999999999999999887433321 123345567777777
Q ss_pred HhhHHHHhcC------CCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCccce
Q 014263 119 KTDIEFQKKG------ETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGR 192 (427)
Q Consensus 119 ~~d~~~~~~~------~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~ 192 (427)
.++..+.... ..+|||++++++.++.++++|+||||+|++ +++.+.++|.||++. +..+..||...+|++.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~-~~~~~~~lt~dh~~~-~~~~~~~i~~~~~~~~- 157 (254)
T cd00143 81 RADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLC-RNGEAVQLTKDHKPV-NEEERERIEKAGGRVS- 157 (254)
T ss_pred HHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEE-cCCceeEcCCCCCCc-ChHHHHHHHHcCCcEE-
Confidence 7777765432 579999999999999999999999999999 999999999999996 5889999999988652
Q ss_pred ecccCCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcCC----C
Q 014263 193 LNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGL----P 268 (427)
Q Consensus 193 ~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~~----~ 268 (427)
.+.+|+++.+||+||+..++..+.++|++..+++.+++++|||||||||++++.+++.+++... +
T Consensus 158 -----------~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~ 226 (254)
T cd00143 158 -----------NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKED 226 (254)
T ss_pred -----------eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcccC
Confidence 2334588999999999988877889999999999788999999999999999999999997654 6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEEEEe
Q 014263 269 AELAAKLVVKEALRSRGLKDDTTCLVVDI 297 (427)
Q Consensus 269 ~~~~a~~Lv~~Al~~~G~~DNiTvIvv~l 297 (427)
++++|+.|++.|.. .+..||+|+|++.+
T Consensus 227 ~~~~a~~l~~~a~~-~~~~Dn~t~i~~~~ 254 (254)
T cd00143 227 LQEAAQELVDLALR-RGSHDNITVVVVRL 254 (254)
T ss_pred HHHHHHHHHHHHHh-CCCCCCEEEEEEeC
Confidence 99999999999998 88999999999875
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.7e-33 Score=269.89 Aligned_cols=232 Identities=38% Similarity=0.516 Sum_probs=193.4
Q ss_pred cCCCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHH
Q 014263 39 AALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFV 118 (427)
Q Consensus 39 ~~~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af~ 118 (427)
.+.|..|||++++.... ...+.+|+|||||||..+|+++++.+.+.+.......... ...+.+.|.+++.
T Consensus 14 ~~~r~~neD~~~~~~~~-------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~ 83 (255)
T smart00332 14 QGVRKPMEDAHVITPDL-------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDE---LEDVEEALRKAFL 83 (255)
T ss_pred CCCCCCCcceEEEeccC-------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccc---hhHHHHHHHHHHH
Confidence 34789999999987541 1458899999999999999999999999887762222111 1234556667777
Q ss_pred HhhHHHHhcC------CCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCccce
Q 014263 119 KTDIEFQKKG------ETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGR 192 (427)
Q Consensus 119 ~~d~~~~~~~------~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~ 192 (427)
.++..+.... ..+|||++++++.+++++++|+||||+|++ +++++.+||.||++. +..|..||...++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~-~~~~~~~lt~dh~~~-~~~~~~~i~~~~~~~~~ 161 (255)
T smart00332 84 KTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLC-RNGKAVQLTEDHKPS-NEDERARIEAAGGFVIN 161 (255)
T ss_pred HHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEE-eCCceeEcCCCCCCc-CHHHHHHHHHcCCEEEC
Confidence 7776665432 468999999999999999999999999999 899999999999995 77899999999887642
Q ss_pred ecccCCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcCC----C
Q 014263 193 LNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGL----P 268 (427)
Q Consensus 193 ~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~~----~ 268 (427)
..+|+.+.+||++|+..+++.+.++|++..+++.+.+++|||||||||++++.+++.+++... +
T Consensus 162 ------------~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~ 229 (255)
T smart00332 162 ------------GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSKSD 229 (255)
T ss_pred ------------CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhcCC
Confidence 134578899999999998888999999999996578999999999999999999999997654 5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCeEEEEE
Q 014263 269 AELAAKLVVKEALRSRGLKDDTTCLVV 295 (427)
Q Consensus 269 ~~~~a~~Lv~~Al~~~G~~DNiTvIvv 295 (427)
+..+++.|++.|.. +|..||+|+||+
T Consensus 230 ~~~~~~~l~~~a~~-~~~~Dn~T~ivv 255 (255)
T smart00332 230 PEEAAKRLIDLALA-RGSKDNITVIVV 255 (255)
T ss_pred HHHHHHHHHHHHHH-cCCCCCeEEEEC
Confidence 99999999999998 899999999985
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=8.7e-34 Score=303.03 Aligned_cols=233 Identities=21% Similarity=0.279 Sum_probs=168.0
Q ss_pred CCCCCcccEEeccCCcCC--C-CCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHH
Q 014263 41 LAKKGEDYFLIKPDCQRI--P-GNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGF 117 (427)
Q Consensus 41 ~r~~nEDa~~v~~~~~~~--~-~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af 117 (427)
.|+.|||++.+....... + +.......+|+|||||||+.+++.|++.+++.+.+.+......+. ...+.|.+++
T Consensus 386 ~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~---~~~~~L~~ai 462 (645)
T PRK14559 386 QRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL---PDEETIREAI 462 (645)
T ss_pred CCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc---cHHHHHHHHH
Confidence 589999999876532110 1 111123578999999999988777777777776554222111100 0123455556
Q ss_pred HHhhHHHHhc--------CCCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCc
Q 014263 118 VKTDIEFQKK--------GETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGE 189 (427)
Q Consensus 118 ~~~d~~~~~~--------~~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~ 189 (427)
..++..+... ..++|||++++++.++++|++||||||+|+++++|++.+||+||++.+...+ .|
T Consensus 463 ~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~------~G-- 534 (645)
T PRK14559 463 YLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQ------RG-- 534 (645)
T ss_pred HHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHH------hC--
Confidence 5556555431 2469999999999999999999999999999678899999999998522211 12
Q ss_pred cceecccCCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCccc--CCh---HHHHHHh
Q 014263 190 VGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDA--LTS---DMAAKSC 264 (427)
Q Consensus 190 v~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~--ls~---~ei~~i~ 264 (427)
+. -...+.||+++.+||+||+...+. .+|++..+++ +.|++||||||||||+ +.. +++..++
T Consensus 535 i~---------~~~a~~~p~~~~LTrALG~~~~~~---l~Pdi~~~~L-~~gD~lLLCSDGL~D~~~ve~~~~~~l~~il 601 (645)
T PRK14559 535 VE---------PQIAYARPDAYQLTQALGPRDNSA---IQPDIQFLEI-EEDTLLLLCSDGLSDNDLLETHWQTHLLPLL 601 (645)
T ss_pred CC---------HHHHhcCcccceeeeccCCCCCCc---ccceEEEEEc-CCCCEEEEECCCCCCCcccchHHHHHHHHHH
Confidence 10 013445688999999999875432 4799999999 7899999999999994 444 3445565
Q ss_pred cCC-CHHHHHHHHHHHHHhcCCCCCCeEEEEEEec
Q 014263 265 RGL-PAELAAKLVVKEALRSRGLKDDTTCLVVDII 298 (427)
Q Consensus 265 ~~~-~~~~~a~~Lv~~Al~~~G~~DNiTvIvv~l~ 298 (427)
... +++.++++|++.|+. +|++||+|+|||++.
T Consensus 602 ~~~~~l~~aa~~Li~~Al~-~gg~DNITvIvV~l~ 635 (645)
T PRK14559 602 SSSANLDQGLNKLIDLANQ-YNGHDNITAILVRLK 635 (645)
T ss_pred hcCCCHHHHHHHHHHHHHH-cCCCCcEEEEEEEec
Confidence 544 899999999999998 899999999999994
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-33 Score=271.23 Aligned_cols=154 Identities=33% Similarity=0.580 Sum_probs=140.3
Q ss_pred CCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCcc---ceecccCCCcccccc
Q 014263 129 ETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEV---GRLNVFGGNEVGPLR 205 (427)
Q Consensus 129 ~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v---~~~~~~~g~~~g~~r 205 (427)
..+|||+++++|.+.+|||||.|||||++. |+|+..-+|.||.|. +..|..||..+||.| +|+|
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~s-r~GkAvdmS~DHKPE-DevE~~RI~~AGG~vtlDGRVN----------- 394 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLS-RNGKAVDMSVDHKPE-DEVETNRIHAAGGQVTLDGRVN----------- 394 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEe-cCCceeecccCCCcc-cHHHHHHHHhcCCeEeecceec-----------
Confidence 468999999999999999999999999999 999999999999996 899999999999998 5887
Q ss_pred ccCCCcccccccCCCCcc---------ccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcCC-----CHHH
Q 014263 206 CWPGGLCLSRSIGDTDVG---------EFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGL-----PAEL 271 (427)
Q Consensus 206 ~~p~~l~lTRsiGd~~~k---------~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~~-----~~~~ 271 (427)
|+++|||+|||..|| +.|++.|+|+...|++.++|+||++||||.+|+.+++++++|.. ....
T Consensus 395 ---GGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~ 471 (542)
T KOG0699|consen 395 ---GGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSE 471 (542)
T ss_pred ---CccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHH
Confidence 999999999999997 45899999999999999999999999999999999999996643 7888
Q ss_pred HHHHHHHHHHhcC-----CCCCCeEEEEEEec
Q 014263 272 AAKLVVKEALRSR-----GLKDDTTCLVVDII 298 (427)
Q Consensus 272 ~a~~Lv~~Al~~~-----G~~DNiTvIvv~l~ 298 (427)
+++.|.+.+|... -..||||||++.|.
T Consensus 472 iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fk 503 (542)
T KOG0699|consen 472 ICEELCDACLAPSTDGDGTGCDNMTVIITTFK 503 (542)
T ss_pred HHHHHHHhhcCCCCCCCCcCCCcceEEEEEec
Confidence 9999999998521 13699999999994
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-32 Score=270.20 Aligned_cols=228 Identities=26% Similarity=0.383 Sum_probs=183.1
Q ss_pred CCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCC-------CChh----------
Q 014263 41 LAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQG-------ASRD---------- 103 (427)
Q Consensus 41 ~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~-------~~~~---------- 103 (427)
+.+..||...+... ....+.++||||||||..+++|.+++|..++...+... +..+
T Consensus 81 ~~~~~edrv~~~~s-------~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~ 153 (390)
T KOG0700|consen 81 QGKAEEDRVSVAVS-------EENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLL 153 (390)
T ss_pred cCCcccCcceeeee-------ccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhh
Confidence 34566777666544 34679999999999999999999999999998553221 1111
Q ss_pred ----------HHHHHHHHHHHHHHHHhhHHHHhcC----------CCCCceEEEEEEeCCEEEEEEeccceEEEEe--eC
Q 014263 104 ----------EWLQALPRALVAGFVKTDIEFQKKG----------ETSGTTVTFVVIDGWTVTVASVGDSRCILDT--QG 161 (427)
Q Consensus 104 ----------~~~~~i~~al~~af~~~d~~~~~~~----------~~sGtT~~~viI~~~~l~vanvGDSRayl~~--r~ 161 (427)
.....+.++|.+||.+++.++.... ..+|+++++.++.+..|||||+|||||+|.. .+
T Consensus 154 ~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~ 233 (390)
T KOG0700|consen 154 VYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENN 233 (390)
T ss_pred hhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCC
Confidence 1145678899999999999886421 4699999999999999999999999999963 33
Q ss_pred C---eeEEcccCCCCCCCHHHHHHHHhcCCccceecccCCCccccccccCCCcccccccCCCCcc---------------
Q 014263 162 G---IVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVG--------------- 223 (427)
Q Consensus 162 g---~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k--------------- 223 (427)
+ ...|||.||+. .+.+|+.||+..+..-..+.+.+. .| -.|.+.+||||||..+|
T Consensus 234 ~~~~~A~qLS~dHn~-~ne~Ev~Rir~eHPdd~~~vv~~~-----~R-vkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~ 306 (390)
T KOG0700|consen 234 GSWLVAVQLSTDHNA-SNEDEVRRIRSEHPDDPHIVVNKH-----WR-VKGILQVSRAFGDGYLKWPEFNQEPLLEKFRI 306 (390)
T ss_pred CCeEEEEecChhhcc-ccHHHHHHHHHhCCCCcceEeecc-----ce-eeEEEEeeeeccceeecchhhccchhHhhcCC
Confidence 3 47899999998 499999999999885433322211 11 13889999999999887
Q ss_pred ------ccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcC-----CCHHHHHHHHHHHHHh
Q 014263 224 ------EFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRG-----LPAELAAKLVVKEALR 282 (427)
Q Consensus 224 ------~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~-----~~~~~~a~~Lv~~Al~ 282 (427)
++++++|.++.++|.+.+.||||+|||+||+|+++|+++++.. ..-+.+|..|++.|+.
T Consensus 307 ~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~ 376 (390)
T KOG0700|consen 307 PYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALG 376 (390)
T ss_pred CCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHh
Confidence 6799999999999998999999999999999999999999776 5567899999999986
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-22 Score=196.32 Aligned_cols=232 Identities=26% Similarity=0.382 Sum_probs=170.0
Q ss_pred CceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCC----------------------------hh-----HHHHHHH
Q 014263 64 TSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGAS----------------------------RD-----EWLQALP 110 (427)
Q Consensus 64 ~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~----------------------------~~-----~~~~~i~ 110 (427)
-++.+|.+||||.|+.+|-.|++.+.+.+...+++-.. ++ .-...+.
T Consensus 142 ~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LVi 221 (493)
T KOG1323|consen 142 ADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVI 221 (493)
T ss_pred CcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhH
Confidence 35789999999999999999999998887766431110 00 0012456
Q ss_pred HHHHHHHHHhhHHHHhc----CCCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhc
Q 014263 111 RALVAGFVKTDIEFQKK----GETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTAS 186 (427)
Q Consensus 111 ~al~~af~~~d~~~~~~----~~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~ 186 (427)
-||..||+.+|..+.+. ...+|||+.+++.--++||++|.||||++++ |++.+..||++.++. .|++|++..
T Consensus 222 GAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlV-rndeirplS~efTPe---tERqRlQ~L 297 (493)
T KOG1323|consen 222 GALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILV-RNDEIRPLSKEFTPE---TERQRLQEL 297 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEE-ecCCeeecccccCcH---HHHHHHHHH
Confidence 78899999999877653 4689999999999999999999999999999 999999999999984 578888763
Q ss_pred --------CCccceec---ccCC---------------------Ccccccccc-----------CCCcccccccCCCCc-
Q 014263 187 --------GGEVGRLN---VFGG---------------------NEVGPLRCW-----------PGGLCLSRSIGDTDV- 222 (427)
Q Consensus 187 --------Gg~v~~~~---~~~g---------------------~~~g~~r~~-----------p~~l~lTRsiGd~~~- 222 (427)
|++..++. .... .+-..+|.. .+-+.+||-|||..+
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 33322211 0001 111122211 155679999998866
Q ss_pred --------cccccccceEEEEEec----CCCcEEEEEecCCcccCChHHHHHHhcCC-------CHH---HHHHHHHHHH
Q 014263 223 --------GEFIVPIPHVKQVKLS----NAGGRLIIASDGIWDALTSDMAAKSCRGL-------PAE---LAAKLVVKEA 280 (427)
Q Consensus 223 --------k~~i~a~P~v~~~~l~----~~gd~LILaSDGvwd~ls~~ei~~i~~~~-------~~~---~~a~~Lv~~A 280 (427)
|++.++.|+|+.++++ -.+|++||+|||+||+++++++..+++.. +|. .+|+.++..|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~a 457 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAA 457 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHh
Confidence 4778899999999886 35789999999999999999999886543 444 3566666665
Q ss_pred Hhc------------CCCCCCeEEEEEEecC
Q 014263 281 LRS------------RGLKDDTTCLVVDIIP 299 (427)
Q Consensus 281 l~~------------~G~~DNiTvIvv~l~~ 299 (427)
--. .|+.|||||-||-+.-
T Consensus 458 rg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~ 488 (493)
T KOG1323|consen 458 RGQQKDRGWRMNNGGLGSGDDISVFVIPLKY 488 (493)
T ss_pred cCccCCCceeccCCCcCCCCceEEEEEeccC
Confidence 321 2567999999998843
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.87 E-value=5.2e-21 Score=184.89 Aligned_cols=208 Identities=22% Similarity=0.329 Sum_probs=141.0
Q ss_pred CCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchh-----HHHHHHHHHHHHHHHh-CCCCCChhHHHHHHHHHHH
Q 014263 41 LAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVS-----AAIFTKESLLNNVLSA-IPQGASRDEWLQALPRALV 114 (427)
Q Consensus 41 ~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~-----aA~~as~~l~~~l~~~-~~~~~~~~~~~~~i~~al~ 114 (427)
..+.+||++++... ....+.|||||+||++ .+.|+ +.|.....+. ......... ....|.
T Consensus 87 ~~~~GEDa~Fvss~---------~~~~v~GVADGVGGWa~~GiDpg~fS-~eLM~~ce~~v~~~~~~~~~----P~~lL~ 152 (330)
T KOG1379|consen 87 VGKGGEDAWFVSSN---------PHAIVMGVADGVGGWAEYGIDPGAFS-RELMSNCERLVQNSDFNPSD----PVNLLE 152 (330)
T ss_pred CCCCCCcceeeccC---------cccceEEEccccchHhhcCcCHHHHH-HHHHHHHHHHhcccccCCCC----hHHHHH
Confidence 44689999999875 4578999999999875 44444 3444443333 112222112 233444
Q ss_pred HHHHHhhHHHHhcCCCCCceEEEEEEe--CCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCccce
Q 014263 115 AGFVKTDIEFQKKGETSGTTVTFVVID--GWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGR 192 (427)
Q Consensus 115 ~af~~~d~~~~~~~~~sGtT~~~viI~--~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~ 192 (427)
+++..+.. +....-+++|++++.++ +.+||+||+|||-..++ |+|++.+-|..+....|..-+
T Consensus 153 ~ay~~l~~--~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~Vv-R~G~vv~~S~~Q~H~FN~PyQ------------ 217 (330)
T KOG1379|consen 153 KAYAELKS--QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVV-REGKVVFRSPEQQHYFNTPYQ------------ 217 (330)
T ss_pred HHHHHHhh--cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEE-ECCEEEEcCchheeccCCcee------------
Confidence 44443322 11123477888888888 89999999999999999 999999999877665432111
Q ss_pred ecccCCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcC------
Q 014263 193 LNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRG------ 266 (427)
Q Consensus 193 ~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~------ 266 (427)
+-..|.+. ..+++|.. ..-++..+.+ +.||+||+|||||||++.+++|.+++..
T Consensus 218 -----------Ls~~p~~~--~~~~~d~p------~~ad~~~~~v-~~GDvIilATDGlfDNl~e~~Il~il~~~~~~~~ 277 (330)
T KOG1379|consen 218 -----------LSSPPEGY--SSYISDVP------DSADVTSFDV-QKGDVIILATDGLFDNLPEKEILSILKGLDARGN 277 (330)
T ss_pred -----------eccCCccc--cccccCCc------cccceEEEec-cCCCEEEEecccccccccHHHHHHHHHHhhcccc
Confidence 11111111 23344431 2346788899 8999999999999999999999999543
Q ss_pred CCHHHHHHHHHHHHHhc----------------------CCCCCCeEEEEEEe
Q 014263 267 LPAELAAKLVVKEALRS----------------------RGLKDDTTCLVVDI 297 (427)
Q Consensus 267 ~~~~~~a~~Lv~~Al~~----------------------~G~~DNiTvIvv~l 297 (427)
.+++..|+.|+..|.+. .|..||||+||..+
T Consensus 278 ~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 278 LDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred ccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 28999999999998762 24589999999753
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.80 E-value=3.5e-19 Score=166.91 Aligned_cols=182 Identities=24% Similarity=0.294 Sum_probs=103.9
Q ss_pred EeecCCCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHH--HHHHHHHH
Q 014263 36 YGQAALAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEW--LQALPRAL 113 (427)
Q Consensus 36 ~G~~~~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~--~~~i~~al 113 (427)
..+.+.+..|||++.+... .++.+++||||+||...+..+++.+++.+.+.+......... ...+.+.+
T Consensus 3 ~sh~~~~~~nqD~~~~~~~---------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~ 73 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD---------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAI 73 (212)
T ss_dssp ----TTSSS--EEEEEE-T---------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC---------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 3455678899999997755 445677999999988777777777777766664433332221 22333333
Q ss_pred HHHHHHh-----hH-HHHhcCCCCCceEEEEEEeCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcC
Q 014263 114 VAGFVKT-----DI-EFQKKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASG 187 (427)
Q Consensus 114 ~~af~~~-----d~-~~~~~~~~sGtT~~~viI~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~G 187 (427)
.+..... .. .-.......+||++++++.++.++++|+||||+|++.++|.+..++.||+.. . ..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~--~-~~------- 143 (212)
T PF13672_consen 74 KKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGE--Y-PN------- 143 (212)
T ss_dssp HHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHH--H-HH-------
T ss_pred HHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccch--h-hh-------
Confidence 3333211 11 1122346789999999999999999999999998776999999999999731 1 00
Q ss_pred CccceecccCCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHH-HHHHhcC
Q 014263 188 GEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDM-AAKSCRG 266 (427)
Q Consensus 188 g~v~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~e-i~~i~~~ 266 (427)
.++.+...... ...++..+++ +.++.|+|||||||+.+...+ +..++..
T Consensus 144 -------------------------~~~~~~~~~~~----~~~~~~~~~~-~~~d~ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 144 -------------------------QTRSLTGDDPE----PDVQYGSIPL-EEGDVILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp -------------------------CTTSCCHHCCC----TETEEEEEE---TT-EEEEE-HHHHTTS-HHHHHHHH---
T ss_pred -------------------------hhhccCccccc----cCCeEEEEEc-CCCCEEEEECcCccccCCCHHHHHHHhhh
Confidence 02222222111 1235666776 789999999999999998655 6566544
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.78 E-value=2.3e-18 Score=185.17 Aligned_cols=218 Identities=23% Similarity=0.335 Sum_probs=187.1
Q ss_pred CceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHHhhHHHHhcCCCCCceEEEEEEeC-
Q 014263 64 TSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGETSGTTVTFVVIDG- 142 (427)
Q Consensus 64 ~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af~~~d~~~~~~~~~sGtT~~~viI~~- 142 (427)
...+.||.+||-+-.....+....+.+.+.+.+....+.. +-|..+|...++++...++..|..++.+.|..
T Consensus 549 ~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et-------~~mr~~fl~~~rklg~~g~~lg~~~~~~~i~~d 621 (1081)
T KOG0618|consen 549 NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNET-------EQMRNTFLRLNRKLGEEGQVLGGSVVLCQIVED 621 (1081)
T ss_pred CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChH-------HHHHHHHHHHhhhhhhhhccccchhhheeeccc
Confidence 3468999999999888888888888887777744433322 22889999999999988888888888888854
Q ss_pred -------CEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCccceecccCCCccccccccCCCccccc
Q 014263 143 -------WTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSR 215 (427)
Q Consensus 143 -------~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~~~~~~g~~~g~~r~~p~~l~lTR 215 (427)
.++.+||+|+|.++++ ++|.-.++|+-...+.+++|-+||..++|+|..-+-.. |....||
T Consensus 622 ~~~~asS~~l~~Anvg~c~avls-~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~n-----------gvt~~tR 689 (1081)
T KOG0618|consen 622 SLSPASSKTLFAANVGTCMAVLS-RNGKPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLN-----------GVTSSTR 689 (1081)
T ss_pred ccCcccchhhhHhhhccchhhhh-hcCCcCcccccccccCCHHHHHHHHHhcCeecCCCeee-----------ceeeeee
Confidence 4789999999999999 99999999987766669999999999999996322111 6668999
Q ss_pred ccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcCC-CHHHHHHHHHHHHHhcCCCCCCeEEEE
Q 014263 216 SIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGL-PAELAAKLVVKEALRSRGLKDDTTCLV 294 (427)
Q Consensus 216 siGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~~-~~~~~a~~Lv~~Al~~~G~~DNiTvIv 294 (427)
++|.+...+.|.|.|+|..+.|++.+++||+++-++|++|+.+++++.+|.. +|-.||.+|.+.|.. .|..||+++||
T Consensus 690 ~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d~AqS-Ygc~~nv~vlV 768 (1081)
T KOG0618|consen 690 AIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCDLAQS-YGCAENVSVLV 768 (1081)
T ss_pred ecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHHHHHh-cccccCeeEEE
Confidence 9999999999999999999999999999999999999999999999999966 999999999999997 99999999999
Q ss_pred EEecCCC
Q 014263 295 VDIIPSD 301 (427)
Q Consensus 295 v~l~~~~ 301 (427)
|++...+
T Consensus 769 v~l~~~~ 775 (1081)
T KOG0618|consen 769 VRLNHLE 775 (1081)
T ss_pred EEeecch
Confidence 9995543
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.70 E-value=1.3e-15 Score=140.76 Aligned_cols=174 Identities=18% Similarity=0.185 Sum_probs=125.3
Q ss_pred CCCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHHh
Q 014263 41 LAKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKT 120 (427)
Q Consensus 41 ~r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af~~~ 120 (427)
....+-|++.+... .+...+++|+||||+...|.+++..+...+.+...........+. .+
T Consensus 13 ~~~~~GD~~~~~~~--------~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~~~~~l~-----------~~ 73 (193)
T smart00331 13 ATQVGGDFYDVVKL--------PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGISLSQILE-----------RL 73 (193)
T ss_pred hHhcCccEEEEEEe--------CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCCHHHHHH-----------HH
Confidence 34577888877655 133789999999999888888889888888777444333333332 33
Q ss_pred hHHHHhc-CCCCCceEEEEEE--eCCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHHhcCCccceecccC
Q 014263 121 DIEFQKK-GETSGTTVTFVVI--DGWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFG 197 (427)
Q Consensus 121 d~~~~~~-~~~sGtT~~~viI--~~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~~~~~~ 197 (427)
+..+... ....++|++++++ ..++++++|+||+|+|++++++...+++.+..
T Consensus 74 n~~l~~~~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~------------------------- 128 (193)
T smart00331 74 NRAIYENGEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG------------------------- 128 (193)
T ss_pred HHHHHhcCCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC-------------------------
Confidence 3333332 3568999999998 57899999999999999942555554544422
Q ss_pred CCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHHHHHHhcCC---CHHHHHH
Q 014263 198 GNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDMAAKSCRGL---PAELAAK 274 (427)
Q Consensus 198 g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~ei~~i~~~~---~~~~~a~ 274 (427)
+.+|.... .+++...+.+ ++||+|+|+||||||.++.+++.++++.. +++++++
T Consensus 129 -----------------~~lG~~~~-----~~~~~~~~~l-~~gd~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~ 185 (193)
T smart00331 129 -----------------APLGLEPD-----VEVDVRELTL-EPGDLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQ 185 (193)
T ss_pred -----------------ceeeeCCC-----CcceeEEEee-CCCCEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHH
Confidence 12333211 2356677888 89999999999999999999999887664 6889999
Q ss_pred HHHHHHH
Q 014263 275 LVVKEAL 281 (427)
Q Consensus 275 ~Lv~~Al 281 (427)
+|.+.+.
T Consensus 186 ~i~~~~~ 192 (193)
T smart00331 186 RILEELL 192 (193)
T ss_pred HHHHHHh
Confidence 8888765
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.58 E-value=8.6e-14 Score=153.67 Aligned_cols=200 Identities=20% Similarity=0.212 Sum_probs=140.0
Q ss_pred CCeeeEeecCC----CCCCcccEEeccCCcCCCCCCCCceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHH
Q 014263 31 KPFVKYGQAAL----AKKGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWL 106 (427)
Q Consensus 31 ~~~~~~G~~~~----r~~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~ 106 (427)
+..+.+|.+.. ...+.|++.+... .+...+++|+||+|+...|..++..+.+.+.+.+....+.+..+
T Consensus 549 ~~~~~~g~a~~~k~g~~vsGD~y~~~~l--------~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~~~ai 620 (764)
T TIGR02865 549 KYHVSTGVARAAKDGELVSGDSYSFGKL--------SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDREVAI 620 (764)
T ss_pred ceeehhhHHHhcCCCCcccCceEEEEEE--------CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 34455555552 3478899887654 13457899999999766666677777776665555555555444
Q ss_pred HHHHHHHHHHHHHhhHHHHhcCCCCCceEEEEEEe--CCEEEEEEeccceEEEEeeCCeeEEcccCCCCCCCHHHHHHHH
Q 014263 107 QALPRALVAGFVKTDIEFQKKGETSGTTVTFVVID--GWTVTVASVGDSRCILDTQGGIVSLLTVDHRLEENAEERERVT 184 (427)
Q Consensus 107 ~~i~~al~~af~~~d~~~~~~~~~sGtT~~~viI~--~~~l~vanvGDSRayl~~r~g~i~~LT~DH~~~~~~~E~~rI~ 184 (427)
..+++.+.. .......+|+.+++++ .+++.++++|+++.|+. +++.+..++..+.+.
T Consensus 621 ~~lN~~L~~----------~~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~-r~~~v~~i~s~~lPl---------- 679 (764)
T TIGR02865 621 KTVNSILSL----------RSTDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIK-RGAKVEVIRSSNLPI---------- 679 (764)
T ss_pred HHHHHHHHh----------CCCCCeEEEEEEEEEECCCCeEEEEecCCCceEEE-ECCEEEEecCCCcee----------
Confidence 444444321 0123467999999996 68999999999999999 889888886543321
Q ss_pred hcCCccceecccCCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcccCChHH-----
Q 014263 185 ASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSDM----- 259 (427)
Q Consensus 185 ~~Gg~v~~~~~~~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~e----- 259 (427)
|-.. -.+++...+++ ++||+|+++||||||..+..+
T Consensus 680 ---------------------------------Gil~-----~~~~~~~~~~L-~~GD~Lll~SDGv~E~~~~~~~~~~~ 720 (764)
T TIGR02865 680 ---------------------------------GILD-----EVDVELVRKKL-KNGDLIVMVSDGVLEGEKEVEGKVLW 720 (764)
T ss_pred ---------------------------------Eecc-----CCccceEEEEe-CCCCEEEEECCCCCcCCcccccHHHH
Confidence 1110 02456677888 899999999999999876433
Q ss_pred HHHHhcC---CCHHHHHHHHHHHHHhcCC--CCCCeEEEEEEec
Q 014263 260 AAKSCRG---LPAELAAKLVVKEALRSRG--LKDDTTCLVVDII 298 (427)
Q Consensus 260 i~~i~~~---~~~~~~a~~Lv~~Al~~~G--~~DNiTvIvv~l~ 298 (427)
+.++++. .+|+++++.|++.+++..+ ..||+|+++++++
T Consensus 721 l~~~l~~~~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv~ 764 (764)
T TIGR02865 721 LVRKLKETNTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKVY 764 (764)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEeC
Confidence 5666543 3899999999999986333 4799999999873
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.40 E-value=1.8e-11 Score=112.65 Aligned_cols=174 Identities=22% Similarity=0.266 Sum_probs=113.1
Q ss_pred CceEEEEEEcCcCchhHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHHhhHHHHhcCC-CCCceEEEEEEe-
Q 014263 64 TSFSVFAIFDGHNGVSAAIFTKESLLNNVLSAIPQGASRDEWLQALPRALVAGFVKTDIEFQKKGE-TSGTTVTFVVID- 141 (427)
Q Consensus 64 ~~~~vf~V~DGhGG~~aA~~as~~l~~~l~~~~~~~~~~~~~~~~i~~al~~af~~~d~~~~~~~~-~sGtT~~~viI~- 141 (427)
++..+++|+|+.|..-.|.+.+..+...+........+.......+++.+... ... ...+|+++++++
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~----------~~~~~~~~t~~~~~~d~ 71 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLDPEELLEALNRRLYRD----------LKGDNRYATACYAIIDP 71 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHH----------TTTTSTTEEEEEEEEET
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH----------hhhccccceEEEEEecc
Confidence 34788999999995555555555555555555444444555554444444321 112 267888888876
Q ss_pred -CCEEEEEEeccceEEEEeeC--CeeEEcccCCCCCCCHHHHHHHHhcCCccceecccCCCccccccccCCCcccccccC
Q 014263 142 -GWTVTVASVGDSRCILDTQG--GIVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIG 218 (427)
Q Consensus 142 -~~~l~vanvGDSRayl~~r~--g~i~~LT~DH~~~~~~~E~~rI~~~Gg~v~~~~~~~g~~~g~~r~~p~~l~lTRsiG 218 (427)
.++++++|+|++.++++ ++ +....+.....+ +|
T Consensus 72 ~~~~l~~~~aG~~~~l~~-~~~~~~~~~~~~~~~~-------------------------------------------lG 107 (193)
T PF07228_consen 72 ETGTLTYANAGHPPPLLL-RPGGREIEQLESEGPP-------------------------------------------LG 107 (193)
T ss_dssp TTTEEEEEEESSSEEEEE-ETTCTEEEEETCSSBB-------------------------------------------CS
T ss_pred cceEEEEeCCCCCCEEEE-eccccceeecccCccc-------------------------------------------ee
Confidence 67899999999999999 65 334444222222 22
Q ss_pred CCCccccccccceEEEEEecCCCcEEEEEecCCcccCChH-------HHHHHhc---CCCHHHHHHHHHHHHHh--cCCC
Q 014263 219 DTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALTSD-------MAAKSCR---GLPAELAAKLVVKEALR--SRGL 286 (427)
Q Consensus 219 d~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd~ls~~-------ei~~i~~---~~~~~~~a~~Lv~~Al~--~~G~ 286 (427)
-..- .......+.+ ++||+|+|+||||+|....+ .+.+++. ..++++.++.+++.+.+ ....
T Consensus 108 ~~~~-----~~~~~~~~~l-~~gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 181 (193)
T PF07228_consen 108 IFED-----IDYQEQEIQL-EPGDRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPL 181 (193)
T ss_dssp SSCT-----TCEEEEEEE---TTEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSST
T ss_pred eecc-----ccccceEEEe-ccccEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCC
Confidence 1110 2345567788 89999999999999998443 3345544 34899999999999986 2346
Q ss_pred CCCeEEEEEEe
Q 014263 287 KDDTTCLVVDI 297 (427)
Q Consensus 287 ~DNiTvIvv~l 297 (427)
.||+|+|++++
T Consensus 182 ~DD~tvl~~~~ 192 (193)
T PF07228_consen 182 RDDITVLVIRR 192 (193)
T ss_dssp SS-EEEEEEEE
T ss_pred CCceEEEEEEE
Confidence 89999999987
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.28 E-value=8.7e-05 Score=75.85 Aligned_cols=186 Identities=23% Similarity=0.243 Sum_probs=117.9
Q ss_pred CCcccEEeccCCcCCCCCCCCceEEEEEEcCcC-chhHHHHHHHHHHHHHHHhCCCC--CChhHHHHHHHHHHHHHHHHh
Q 014263 44 KGEDYFLIKPDCQRIPGNASTSFSVFAIFDGHN-GVSAAIFTKESLLNNVLSAIPQG--ASRDEWLQALPRALVAGFVKT 120 (427)
Q Consensus 44 ~nEDa~~v~~~~~~~~~~~~~~~~vf~V~DGhG-G~~aA~~as~~l~~~l~~~~~~~--~~~~~~~~~i~~al~~af~~~ 120 (427)
.+=|+|-+... ......++|.|..| |..+|-. .......+..+... ......++.+++.+..-
T Consensus 161 vGGD~yd~~~~--------~~~~~~i~I~DvsG~Gv~aal~--m~~~~~~~~~~~~~~~~~p~~~l~~~n~~~~~~---- 226 (367)
T COG2208 161 VGGDYYDFIQL--------GEKRLRIGIGDVSGKGVPAALL--MLMPKLALRLLLESGPLDPADVLETLNRVLKQN---- 226 (367)
T ss_pred cCCceEEEEEE--------CCcEEEEEEEeccCCCHHHHHH--HHHHHHHHHHhhhcccCCHHHHHHHHHHHHHhc----
Confidence 77777776654 12578899999988 6666655 33333444443333 44444444444444431
Q ss_pred hHHHHhcCCCCCceEEEEEEe--CCEEEEEEeccceEEEEeeCCee--EEcccCCCCCCCHHHHHHHHhcCCccceeccc
Q 014263 121 DIEFQKKGETSGTTVTFVVID--GWTVTVASVGDSRCILDTQGGIV--SLLTVDHRLEENAEERERVTASGGEVGRLNVF 196 (427)
Q Consensus 121 d~~~~~~~~~sGtT~~~viI~--~~~l~vanvGDSRayl~~r~g~i--~~LT~DH~~~~~~~E~~rI~~~Gg~v~~~~~~ 196 (427)
.....-+|+.+.+++ ...+.++|+|---.++.+.++.. ..++.
T Consensus 227 ------~~~~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~--------------------------- 273 (367)
T COG2208 227 ------LEEDMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTA--------------------------- 273 (367)
T ss_pred ------ccCCcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccC---------------------------
Confidence 112255778777776 67899999999998888444432 22211
Q ss_pred CCCccccccccCCCcccccccCCCCccccccccceEEEEEecCCCcEEEEEecCCcc-------cCChHHHHHHhc---C
Q 014263 197 GGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWD-------ALTSDMAAKSCR---G 266 (427)
Q Consensus 197 ~g~~~g~~r~~p~~l~lTRsiGd~~~k~~i~a~P~v~~~~l~~~gd~LILaSDGvwd-------~ls~~ei~~i~~---~ 266 (427)
....+|-..- ..+.+...++ ++||.+++.||||.+ .+..+...+++. .
T Consensus 274 ----------------~g~piG~~~~-----~~~~~~~~~l-~~gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~ 331 (367)
T COG2208 274 ----------------LGLPIGLLPD-----YQYEVASLQL-EPGDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLG 331 (367)
T ss_pred ----------------CCceeeecCC-----ccchheeEEe-cCCCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhC
Confidence 1223333211 2344556777 679999999999998 455566666644 2
Q ss_pred CCHHHHHHHHHHHHHhcCCC---CCCeEEEEEEec
Q 014263 267 LPAELAAKLVVKEALRSRGL---KDDTTCLVVDII 298 (427)
Q Consensus 267 ~~~~~~a~~Lv~~Al~~~G~---~DNiTvIvv~l~ 298 (427)
.+++++++.+.+....-.|. +||+|+|++++.
T Consensus 332 ~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 332 QPAEEILEAILESLEELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred CCHHHHHHHHHHHHHHhhCCccccCceEEEEEEec
Confidence 38999999999888764343 688999999873
No 20
>PF07830 PP2C_C: Protein serine/threonine phosphatase 2C, C-terminal domain; InterPro: IPR012911 Protein phosphatase 2C (PP2C) is involved in regulating cellular responses to stress in various eukaryotes. It consists of two domains: an N-terminal catalytic domain and a C-terminal domain characteristic of mammalian PP2Cs. This domain consists of three antiparallel alpha helices, one of which packs against two corresponding alpha-helices of the N-terminal domain. The C-terminal domain does not seem to play a role in catalysis, but it may provide protein substrate specificity due to the cleft that is created between it and the catalytic domain []. ; GO: 0000287 magnesium ion binding, 0004721 phosphoprotein phosphatase activity, 0030145 manganese ion binding; PDB: 2P8E_A 3FXL_A 3FXO_A 1A6Q_A 3FXK_A 3FXM_A 3FXJ_A.
Probab=82.13 E-value=0.61 Score=37.38 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=29.2
Q ss_pred EEEEEEecCCCCCCCCCCchhhHHHHHhhhhhcccccccccccccCccch---hHHhhccCC
Q 014263 291 TCLVVDIIPSDHPVPAPTPRKKQNVLSSLIFGKKAHDSMKTSNKLAAVGV---VEELFEEGS 349 (427)
Q Consensus 291 TvIvv~l~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 349 (427)
|+|+|.|... |++.+.+.+|+..|...|..|. ++......+...+++ |+.|-.|..
T Consensus 1 SiILV~FPgA--Pkvs~EAv~~E~eLd~~l~~rv-~ei~~~~~~~~~~~l~~V~~~L~~e~i 59 (81)
T PF07830_consen 1 SIILVCFPGA--PKVSEEAVKKEAELDKYLEQRV-EEIIEKSSEEENPDLVYVMRTLASEDI 59 (81)
T ss_dssp EEEEEE-TTS------HHHHHHHHHHHHHHHHHH-HHHT----------HHHHHHHHHHTT-
T ss_pred CEEEEecCCC--CCCCHHHHHHHHHHHHHHHHHH-HHHHHHhcccCCCCHHHHHHHHHhccC
Confidence 7899999544 6678888889999999977765 555543333445554 566655543
No 21
>PF10764 Gin: Inhibitor of sigma-G Gin; InterPro: IPR019700 Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB [].
Probab=64.27 E-value=2.5 Score=30.13 Aligned_cols=27 Identities=30% Similarity=1.086 Sum_probs=20.8
Q ss_pred ecceeeecCCCCCCccccCCCCCCCCCCCCCCcccccccccc
Q 014263 370 RCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKK 411 (427)
Q Consensus 370 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
.|.||. .++.+||-|. |-|.|.+|.++
T Consensus 1 ~CiiC~--~~~~~GI~I~-------------~~fIC~~CE~~ 27 (46)
T PF10764_consen 1 KCIICG--KEKEEGIHIY-------------GKFICSDCEKE 27 (46)
T ss_pred CeEeCC--CcCCCCEEEE-------------CeEehHHHHHH
Confidence 377787 6677788774 67999999876
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=54.20 E-value=7.2 Score=30.54 Aligned_cols=24 Identities=29% Similarity=0.545 Sum_probs=18.1
Q ss_pred ecCCCcEEEEEecCCcccCChHHH
Q 014263 237 LSNAGGRLIIASDGIWDALTSDMA 260 (427)
Q Consensus 237 l~~~gd~LILaSDGvwd~ls~~ei 260 (427)
++..|.++++++||+|=.+...-+
T Consensus 23 l~~~G~Rllva~nGv~lEv~r~WL 46 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVRRPWL 46 (72)
T ss_pred cccCCcEEEEecCcEEEEEechHH
Confidence 336899999999999966554433
No 23
>cd00085 HNHc HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.
Probab=49.96 E-value=4.1 Score=28.82 Aligned_cols=43 Identities=26% Similarity=0.424 Sum_probs=31.4
Q ss_pred eecceeeecCCCCCCccccC-CCC-CCCCCCCCCCccccccccccc
Q 014263 369 FRCAVCQVDQPPSDGLSVNS-GPY-FSPTSKPWEGPFLCANCRKKK 412 (427)
Q Consensus 369 ~~~a~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 412 (427)
..|++|...+ .+..+.||= -+. ..+...+++.-.+|..|...|
T Consensus 12 ~~C~~c~~~~-~~~~~~v~Hi~p~~~~~~~~~~Nl~~~c~~ch~~~ 56 (57)
T cd00085 12 GLCPYCGKPG-GTEGLEVDHIIPLSDGGNNDLDNLVLLCRKCHRKK 56 (57)
T ss_pred CcCccCCCcC-CCCCceEEeecchhhCCCCchHHhHHHHHHHhhcc
Confidence 4799999888 455666664 222 246678899999999998764
No 24
>TIGR02573 LcrG_PcrG type III secretion protein LcrG. This protein is found in type III secretion operons, along with LcrR, H and V. Also known as PcrG in Pseudomonas, the protein is believed to make a 1:1 complex with PcrV (LcrV). Mutants of LcrG cause premature secretion of effector proteins into the medium.
Probab=48.90 E-value=8.6 Score=31.05 Aligned_cols=11 Identities=55% Similarity=1.047 Sum_probs=7.9
Q ss_pred CCCCCCCCccc
Q 014263 416 EGKRPGIPTVI 426 (427)
Q Consensus 416 ~~~~~~~~~~~ 426 (427)
+|||++|||+|
T Consensus 75 ~GkR~RRPtmM 85 (90)
T TIGR02573 75 QGKRPRRPTMM 85 (90)
T ss_pred CCCCCCCCccc
Confidence 57777777765
No 25
>KOG2893 consensus Zn finger protein [General function prediction only]
Probab=47.23 E-value=8.5 Score=36.90 Aligned_cols=23 Identities=26% Similarity=0.652 Sum_probs=21.1
Q ss_pred CcceecceeeecCCCCCCccccC
Q 014263 366 SGLFRCAVCQVDQPPSDGLSVNS 388 (427)
Q Consensus 366 ~~~~~~a~~~~~~~~~~~~~~~~ 388 (427)
-|-|.|-||--.|=+|-|+|+|+
T Consensus 32 akhfkchichkkl~sgpglsihc 54 (341)
T KOG2893|consen 32 AKHFKCHICHKKLFSGPGLSIHC 54 (341)
T ss_pred hccceeeeehhhhccCCCceeeh
Confidence 36789999999999999999998
No 26
>PF07216 LcrG: LcrG protein; InterPro: IPR009863 This family consists of several bacterial LcrG proteins. Yersiniae are equipped with the Yop virulon, an apparatus that allows extracellular bacteria to deliver toxic Yop proteins inside the host cell cytosol in order to sabotage the communication networks of the host cell or even to cause cell death. LcrG is a component of the Yop virulon involved in the regulation of secretion of the Yops []. This protein is found in type III secretion operons, along with LcrR, H and V. Also known as PcrG in Pseudomonas, the prot ein is believed to make a 1:1 complex with PcrV (LcrV) []. Mutations in LcrG cause premature secretion of effector proteins into the medium [].
Probab=32.57 E-value=22 Score=28.97 Aligned_cols=11 Identities=64% Similarity=1.105 Sum_probs=6.6
Q ss_pred CCCCCCCCccc
Q 014263 416 EGKRPGIPTVI 426 (427)
Q Consensus 416 ~~~~~~~~~~~ 426 (427)
+|||++|||.|
T Consensus 78 ~G~r~rRPtmM 88 (93)
T PF07216_consen 78 EGKRPRRPTMM 88 (93)
T ss_pred CCCCCCCCccc
Confidence 46666666654
No 27
>COG2174 RPL34A Ribosomal protein L34E [Translation, ribosomal structure and biogenesis]
Probab=29.40 E-value=29 Score=28.33 Aligned_cols=42 Identities=26% Similarity=0.689 Sum_probs=25.8
Q ss_pred CcceecceeeecCCCCCCcccc------C-CCCCCCCCCCCCCcccccccccc
Q 014263 366 SGLFRCAVCQVDQPPSDGLSVN------S-GPYFSPTSKPWEGPFLCANCRKK 411 (427)
Q Consensus 366 ~~~~~~a~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
.+...||+|-..| .||.-- - .-..-.+.+|+.| +||++|-.+
T Consensus 32 ~~~p~C~~cg~pL---~Gi~r~RP~e~~r~skt~krp~RpYGG-~lc~~c~~~ 80 (93)
T COG2174 32 PTIPKCAICGRPL---GGIPRGRPREFRRLSKTKKRPERPYGG-YLCANCVRE 80 (93)
T ss_pred CCCCcccccCCcc---CCccCCCcHHHHhccccccCcCCCcCc-eecHHHHHH
Confidence 3456899999665 355433 2 1222344577755 899999754
No 28
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=27.82 E-value=44 Score=27.65 Aligned_cols=51 Identities=24% Similarity=0.437 Sum_probs=35.7
Q ss_pred CCCcEEEEEecCCcccCChHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCCeEE
Q 014263 239 NAGGRLIIASDGIWDALTSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTC 292 (427)
Q Consensus 239 ~~gd~LILaSDGvwd~ls~~ei~~i~~~~~~~~~a~~Lv~~Al~~~G~~DNiTv 292 (427)
+++|-++|..|||+-.+...+..+.++..+..-. .+-+..+ +||..+.++-
T Consensus 23 ~~~D~vlL~qdGV~aAl~~~~~~~sl~~~p~~~~--alkeDl~-ARGl~~~~s~ 73 (96)
T COG2168 23 TEGDAVLLLQDGVYAALKGNRYLASLRESPIKVY--ALKEDLL-ARGLTGQISR 73 (96)
T ss_pred cccCeEEEEcccchhhhcCcHHHHHHhcCcccee--eehhhHH-hccchhhcCc
Confidence 7899999999999999999888888877652222 2333333 3777655554
No 29
>PHA02565 49 recombination endonuclease VII; Provisional
Probab=27.02 E-value=47 Score=29.95 Aligned_cols=37 Identities=19% Similarity=0.486 Sum_probs=21.4
Q ss_pred ecceeeecCCCC-CCccc-cCCCCCCCCCCCCCCc---cccccccc
Q 014263 370 RCAVCQVDQPPS-DGLSV-NSGPYFSPTSKPWEGP---FLCANCRK 410 (427)
Q Consensus 370 ~~a~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~ 410 (427)
.||+|+..+.+. .+..| |.-+. ++ ||-|- -||..|-.
T Consensus 22 ~CaiC~~~l~~~~~~~~vDHDH~l-~g---~~TG~VRGLLC~~CN~ 63 (157)
T PHA02565 22 ICPLCKRELDGDVSKNHLDHDHEL-NG---PNAGRVRGLLCNLCNA 63 (157)
T ss_pred cCCCCCCccCCCccccccCCCCCC-CC---cccccccccCchhhhh
Confidence 799999876432 33222 22212 22 56665 59999954
No 30
>KOG1829 consensus Uncharacterized conserved protein, contains C1, PH and RUN domains [Signal transduction mechanisms]
Probab=25.81 E-value=23 Score=38.51 Aligned_cols=56 Identities=23% Similarity=0.462 Sum_probs=39.3
Q ss_pred hHHhhccCCHHHHhhhCCCCCCCCCCcceecceeeecCCCCCCccccCCCCCCCCCCCCCCcccccccccc
Q 014263 341 VEELFEEGSAMLAERLGRDFPSNASSGLFRCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKK 411 (427)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
..++|.+ -++++++.+-+. -.|.||.|.-.+.| ..+....+....|-|.|..|++-
T Consensus 320 ~~~i~~~-~~~~~re~gL~a------Q~~~CAgC~~~i~~--------~~~~~~R~C~y~G~y~C~~Ch~~ 375 (580)
T KOG1829|consen 320 CQIIFHI-HPAIPREKGLDA------QNFRCAGCGHTIGP--------DLEQRPRLCRYLGKYFCDCCHQN 375 (580)
T ss_pred hhhhhhc-ccCcchhhhhhc------cCceecccCCCccc--------ccccchhHhhhhhhhhCchhccc
Confidence 4555665 555666644433 23589999977766 34457778899999999999875
No 31
>PF14471 DUF4428: Domain of unknown function (DUF4428)
Probab=23.67 E-value=19 Score=26.10 Aligned_cols=30 Identities=33% Similarity=0.793 Sum_probs=20.2
Q ss_pred ecceeeecCCCCCCccccCCCCCCCCCCCCCCccccccccccc
Q 014263 370 RCAVCQVDQPPSDGLSVNSGPYFSPTSKPWEGPFLCANCRKKK 412 (427)
Q Consensus 370 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
.||||.-++ |.+.. ++==|| |+|.+|.+|-
T Consensus 1 ~C~iCg~ki----------gl~~~--~k~~DG-~iC~~C~~Kl 30 (51)
T PF14471_consen 1 KCAICGKKI----------GLFKR--FKIKDG-YICKDCLKKL 30 (51)
T ss_pred CCCcccccc----------ccccc--eeccCc-cchHHHHHHh
Confidence 488888443 33333 344578 9999999983
No 32
>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=22.82 E-value=44 Score=21.74 Aligned_cols=15 Identities=33% Similarity=0.926 Sum_probs=11.6
Q ss_pred Ccccccccccccccc
Q 014263 401 GPFLCANCRKKKDAM 415 (427)
Q Consensus 401 ~~~~~~~~~~~~~~~ 415 (427)
-|+.|..|...|+..
T Consensus 16 ~~~~CP~Cg~~~~~F 30 (33)
T cd00350 16 APWVCPVCGAPKDKF 30 (33)
T ss_pred CCCcCcCCCCcHHHc
Confidence 566899999887764
No 33
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=21.26 E-value=44 Score=34.09 Aligned_cols=43 Identities=26% Similarity=0.621 Sum_probs=34.0
Q ss_pred eecceeeecCCCCCCccc-cCCCCCCCCC-CCCCCcc--cccccccc
Q 014263 369 FRCAVCQVDQPPSDGLSV-NSGPYFSPTS-KPWEGPF--LCANCRKK 411 (427)
Q Consensus 369 ~~~a~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~--~~~~~~~~ 411 (427)
+.||||+-+-++|+.+-+ -+.+.||.+= .||=+.. -|.-||-.
T Consensus 230 ~~CaIClEdY~~GdklRiLPC~H~FH~~CIDpWL~~~r~~CPvCK~d 276 (348)
T KOG4628|consen 230 DTCAICLEDYEKGDKLRILPCSHKFHVNCIDPWLTQTRTFCPVCKRD 276 (348)
T ss_pred ceEEEeecccccCCeeeEecCCCchhhccchhhHhhcCccCCCCCCc
Confidence 589999999999999765 3477776665 8998887 48889763
Done!