Query 014267
Match_columns 427
No_of_seqs 44 out of 46
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 08:30:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7y_A E3 ubiquitin-protein li 94.2 0.35 1.2E-05 39.9 9.8 50 34-85 69-118 (153)
2 2dmh_A Myoferlin; beta-sandwic 94.1 0.16 5.4E-06 41.3 7.5 71 34-108 49-137 (140)
3 3kwu_A MUNC13-1; calcium bindi 93.2 0.43 1.5E-05 39.2 8.6 49 34-82 60-117 (148)
4 1gmi_A Protein kinase C, epsil 93.0 0.23 8E-06 40.6 6.7 90 9-104 38-133 (136)
5 1wfj_A Putative elicitor-respo 92.6 0.17 5.7E-06 41.0 5.3 70 33-105 53-131 (136)
6 3m7f_B E3 ubiquitin-protein li 92.3 0.62 2.1E-05 39.8 8.7 71 33-105 56-142 (176)
7 1rlw_A Phospholipase A2, CALB 91.9 1 3.5E-05 35.7 9.0 80 9-94 27-108 (126)
8 2ep6_A MCTP2 protein; beta san 89.8 0.61 2.1E-05 37.7 6.0 49 34-84 56-104 (133)
9 3rdl_A Protein kinase C alpha 87.1 1.2 4.1E-05 35.7 6.0 56 34-94 64-121 (137)
10 2fk9_A Protein kinase C, ETA t 86.3 1.1 3.8E-05 39.1 5.8 67 34-103 83-156 (157)
11 1rsy_A Synaptotagmin I; calciu 85.4 1.8 6.1E-05 35.9 6.4 57 34-94 88-147 (152)
12 1a25_A CALB, protein kinase C 85.2 1.2 4.2E-05 36.7 5.3 56 34-94 79-136 (149)
13 2dmg_A KIAA1228 protein; beta- 85.2 1.6 5.5E-05 35.5 5.9 59 34-94 71-132 (142)
14 2d8k_A Synaptotagmin VII; exoc 85.0 2 6.8E-05 35.0 6.4 58 33-94 71-132 (141)
15 1v27_A Regulating synaptic mem 83.7 1.7 5.7E-05 35.0 5.3 58 34-94 69-130 (141)
16 2bwq_A Regulating synaptic mem 83.5 2.4 8.3E-05 33.7 6.1 83 9-94 39-127 (129)
17 1tjx_A Similar to synaptotagmi 82.5 2.9 9.8E-05 34.8 6.4 59 34-94 73-144 (159)
18 3f04_A Synaptotagmin-1; C2A, c 82.5 2.2 7.6E-05 34.7 5.7 57 34-94 80-139 (143)
19 2q3x_A Regulating synaptic mem 80.4 2.3 8E-05 36.3 5.3 82 9-94 52-136 (171)
20 3n5a_A Synaptotagmin-7; calciu 79.9 1.8 6.1E-05 34.6 4.1 70 9-80 37-111 (138)
21 2cm5_A Rabphilin-3A; protein t 78.5 4.6 0.00016 33.9 6.4 46 34-81 85-133 (166)
22 1ugk_A Synaptotagmin IV, KIAA1 78.0 6.4 0.00022 31.8 7.0 50 34-85 69-122 (138)
23 2b3r_A Phosphatidylinositol-4- 75.1 9.5 0.00033 31.1 7.3 57 34-94 67-127 (134)
24 2cjt_A UNC-13 homolog A, MUNC1 74.6 6.1 0.00021 32.7 6.0 49 34-85 44-92 (131)
25 1w15_A Synaptotagmin IV; metal 73.6 6 0.0002 32.6 5.7 69 10-80 52-125 (153)
26 2r83_A Synaptotagmin-1; C2A-C2 73.3 14 0.00048 33.2 8.6 57 34-94 65-124 (284)
27 3pyc_A E3 ubiquitin-protein li 73.0 10 0.00034 30.4 6.8 47 34-81 50-97 (132)
28 2enp_A B/K protein; C2 type 1, 71.9 4.8 0.00016 32.9 4.7 74 9-85 54-131 (147)
29 2nq3_A Itchy homolog E3 ubiqui 71.3 11 0.00039 32.6 7.3 48 34-84 79-126 (173)
30 3fdw_A Synaptotagmin-like prot 67.6 11 0.00038 30.8 6.1 82 9-94 45-131 (148)
31 2cjs_A UNC-13 homolog A, MUNC1 67.3 9.3 0.00032 33.2 5.8 49 34-85 53-101 (167)
32 3fbk_A RGS3, RGP3, regulator o 65.1 8.1 0.00028 32.0 4.8 61 32-94 72-134 (153)
33 2z0u_A WW domain-containing pr 64.3 11 0.00039 32.0 5.7 83 9-94 64-152 (155)
34 2chd_A Rabphilin-3A, exophilin 62.7 7.3 0.00025 31.5 4.0 50 34-85 77-130 (142)
35 1wfm_A Synaptotagmin XIII; C2 60.8 14 0.00049 30.0 5.5 82 9-94 44-129 (138)
36 2r83_A Synaptotagmin-1; C2A-C2 60.6 10 0.00036 34.0 5.0 84 9-94 171-269 (284)
37 1rh8_A Piccolo protein; beta-s 59.8 9.4 0.00032 30.8 4.2 57 34-94 75-135 (142)
38 3jzy_A Intersectin 2; C2 domai 58.2 14 0.0005 36.0 5.9 59 34-94 430-491 (510)
39 3l9b_A Otoferlin; C2-domain, b 54.6 8 0.00027 34.4 3.1 26 65-90 92-117 (144)
40 1zxu_A AT5G01750 protein; PFAM 53.2 1.2E+02 0.0042 26.9 11.0 27 306-332 180-206 (217)
41 1dqv_A Synaptotagmin III; beta 37.5 1.4E+02 0.0049 27.2 8.8 47 34-82 66-116 (296)
42 3bxj_A RAS GTPase-activating p 34.3 7 0.00024 39.4 -0.6 59 34-94 53-113 (483)
43 2apo_B Ribosome biogenesis pro 33.9 8.6 0.00029 29.8 -0.0 12 293-304 34-45 (60)
44 1dqv_A Synaptotagmin III; beta 31.3 15 0.00053 33.6 1.2 46 34-81 200-248 (296)
45 1y2y_A Ribosome biogenesis pro 30.9 13 0.00044 29.0 0.5 11 294-304 34-44 (58)
46 2aus_D NOP10, ribosome biogene 30.3 11 0.00037 29.3 0.0 11 294-304 34-44 (60)
47 3iez_A RAS GTPase-activating-l 25.2 83 0.0028 26.9 4.6 46 31-84 39-86 (114)
48 1cjy_A CPLA2, protein (cytosol 24.7 1.2E+02 0.0041 33.0 6.8 56 34-94 67-123 (749)
No 1
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=94.15 E-value=0.35 Score=39.93 Aligned_cols=50 Identities=12% Similarity=0.175 Sum_probs=42.2
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCC
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAP 85 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~ 85 (427)
.+|.|.....|........|.|+|..+.. +.+...||.+.|++++|....
T Consensus 69 ~nP~wne~f~f~v~~~~~~l~~~V~d~d~--~~~d~~iG~~~i~l~~l~~~~ 118 (153)
T 3b7y_A 69 LNPKWNEEILFRVHPQQHRLLFEVFDENR--LTRDDFLGQVDVPLYPLPTEN 118 (153)
T ss_dssp SSCCCCEEEEEEECTTTCEEEEEEEECCS--SSCCEEEEEEEEECCSCCBCC
T ss_pred CCCCCCCEEEEEecCCCCEEEEEEEECCC--CcCCCeeEEEEEEHHHcccCC
Confidence 57899999899888777789999987754 567889999999999998765
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.11 E-value=0.16 Score=41.33 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=52.6
Q ss_pred cccccceEEEEEEec----cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc--------------c
Q 014267 34 SHNSWQKVWHLYCEF----GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE--------------Q 95 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~----~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e--------------~ 95 (427)
.+|.|.....|.+.. ....|.|+|..+.. +.+...||.+.|++.+|..... .+.|++ .
T Consensus 49 ~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~--~~~~~~lG~~~i~l~~l~~~~~--~~~w~~l~~l~~~~~~~~~G~ 124 (140)
T 2dmh_A 49 LNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET--IGQNKLIGTATVALKDLTGDQS--RSLPYKLISLLNEKGQDTGAT 124 (140)
T ss_dssp SSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC--SSSCCCCEEEEEEGGGTCSSSC--EEEEEEEEEEECTTCCEEEEE
T ss_pred CCCccCcEEEEEecccccCCCCEEEEEEEECCC--CCCCceEEEEEEEHHHhccCCC--ceeEEeeeeccCCCCCCCCCE
Confidence 478999988888853 26788999987765 5567899999999999976543 233432 7
Q ss_pred eeEEEeecCCccc
Q 014267 96 FRVVISITPPVQA 108 (427)
Q Consensus 96 LRVaaSiTpPVqA 108 (427)
|+|.+++.||...
T Consensus 125 l~l~~~~~p~~~~ 137 (140)
T 2dmh_A 125 IDLVIGYDPPSGP 137 (140)
T ss_dssp EEEEEEECCCBSS
T ss_pred EEEEEEEECCCCC
Confidence 7888888876553
No 3
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=93.19 E-value=0.43 Score=39.22 Aligned_cols=49 Identities=10% Similarity=0.249 Sum_probs=40.5
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCC-------C--ccCceeeeeEEeechhhc
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGT-------C--FKGSTLQGTVEFRWNNLL 82 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~-------~--~k~sK~lG~~s~sw~dll 82 (427)
.+|.|.....|.+..+...|.|++..+... . ..+...||.+.|+++++.
T Consensus 60 ~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~ 117 (148)
T 3kwu_A 60 LNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS 117 (148)
T ss_dssp SSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC
T ss_pred CCCCcccEEEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc
Confidence 578999999999977788899999887653 1 157899999999999983
No 4
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=92.96 E-value=0.23 Score=40.57 Aligned_cols=90 Identities=13% Similarity=0.213 Sum_probs=60.8
Q ss_pred ccceeeeeehhhhhccccCCc-cccccccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCcc
Q 014267 9 KCDFLRLRMVRCHRELKLGKP-ISSFSHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSL 87 (427)
Q Consensus 9 ~~~f~rlr~~~~~~~lkld~~-~~~~S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sL 87 (427)
.+-|+.+++-..+ .+ -+. ...-.+|.|.....|.-..+ ..|.|+|..+.. +.+...||.+.|+++++.....-
T Consensus 38 ~DPyv~v~l~~~~--~~-~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V~d~d~--~~~dd~iG~~~i~l~~l~~~~~~ 111 (136)
T 1gmi_A 38 LDPYIALNVDDSR--IG-QTATKQKTNSPAWHDEFVTDVCNG-RKIELAVFHDAP--IGYDDFVANCTIQFEELLQNGSR 111 (136)
T ss_dssp CCEEEEEEETTEE--EE-ECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEEEECCS--SSSCEEEEEEEEEHHHHTSTTCS
T ss_pred cCcEEEEEECCeE--ee-eeeEECCCcCCccCCEEEEEecCC-CEEEEEEEeCCC--CCCCCEEEEEEEEHHHhcccCCC
Confidence 5667777763221 00 111 22224789999888776654 788999887654 55678999999999999976544
Q ss_pred chhhccc-----ceeEEEeecC
Q 014267 88 TMEREIE-----QFRVVISITP 104 (427)
Q Consensus 88 s~Ekw~e-----~LRVaaSiTp 104 (427)
.++.|++ .|+|.+++.+
T Consensus 112 ~~~~w~~L~~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 112 HFEDWIDLEPEGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEEECBSSCEEEEEEEEEE
T ss_pred CccEEEEcCCCeEEEEEEEEEe
Confidence 4577876 6777777654
No 5
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=92.58 E-value=0.17 Score=40.98 Aligned_cols=70 Identities=13% Similarity=0.150 Sum_probs=51.5
Q ss_pred ccccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc---------ceeEEEeec
Q 014267 33 FSHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE---------QFRVVISIT 103 (427)
Q Consensus 33 ~S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e---------~LRVaaSiT 103 (427)
-.+|.|.....|........|.|+|..+.. +.+...||.+.|++.+|+.... ..+.|++ +|++.+++.
T Consensus 53 ~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~--~~~d~~lG~~~i~l~~l~~~~~-~~~~w~~L~~~~~~~G~i~l~l~~~ 129 (136)
T 1wfj_A 53 GTTPEWNETFIFTVSEGTTELKAKIFDKDV--GTEDDAVGEATIPLEPVFVEGS-IPPTAYNVVKDEEYKGEIWVALSFK 129 (136)
T ss_dssp CSSCEEEEEEEEEEESSCCEEEEEECCSSS--CTTTCCSEEEEEESHHHHHHSE-EEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CCCCccCcEEEEEECCCCCEEEEEEEECCC--CCCCceEEEEEEEHHHhccCCC-CCcEEEEeecCCccCEEEEEEEEEE
Confidence 457899999999988777889999987754 5678999999999999964331 1234443 666666666
Q ss_pred CC
Q 014267 104 PP 105 (427)
Q Consensus 104 pP 105 (427)
|-
T Consensus 130 p~ 131 (136)
T 1wfj_A 130 PS 131 (136)
T ss_dssp EC
T ss_pred eC
Confidence 53
No 6
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=92.26 E-value=0.62 Score=39.76 Aligned_cols=71 Identities=10% Similarity=0.162 Sum_probs=48.3
Q ss_pred ccccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCc-c---chhhccc------------ce
Q 014267 33 FSHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPS-L---TMEREIE------------QF 96 (427)
Q Consensus 33 ~S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~s-L---s~Ekw~e------------~L 96 (427)
=.+|.|.+...|...+....|.|+|..+.. +.+...||.+.|++.+|..... . ....|+. .|
T Consensus 56 t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~--~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l 133 (176)
T 3m7f_B 56 SLNPKWNEEILFRVLPQRHRILFEVFDENR--LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYL 133 (176)
T ss_dssp CSSCEEEEEEEEEECTTTCEEEEEEEECC------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEE
T ss_pred CCCCcccceEEEEEcCCCCEEEEEEEECCC--CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEE
Confidence 356789999999988767789999987654 5567899999999999986542 1 1113443 67
Q ss_pred eEEEeecCC
Q 014267 97 RVVISITPP 105 (427)
Q Consensus 97 RVaaSiTpP 105 (427)
+|.++++|.
T Consensus 134 ~l~l~~~p~ 142 (176)
T 3m7f_B 134 RLKMTYLPK 142 (176)
T ss_dssp EEEEEECC-
T ss_pred EEEEEEEeC
Confidence 777777654
No 7
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=91.88 E-value=1 Score=35.71 Aligned_cols=80 Identities=10% Similarity=0.097 Sum_probs=52.9
Q ss_pred ccceeeeeehhhhhccccCCc-cccccccccceEEEEEEe-ccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCc
Q 014267 9 KCDFLRLRMVRCHRELKLGKP-ISSFSHNSWQKVWHLYCE-FGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPS 86 (427)
Q Consensus 9 ~~~f~rlr~~~~~~~lkld~~-~~~~S~~~Wkk~~~fqCE-~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~s 86 (427)
.+-|+++++....+. +.-+. +..=.+|.|.+...|... +....|.|+|..+... + ...||.+.|++.+|...
T Consensus 27 ~dpyv~v~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~--~-~~~iG~~~i~l~~l~~~-- 100 (126)
T 1rlw_A 27 PDPYVELFISTTPDS-RKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV--M-DETLGTATFTVSSMKVG-- 100 (126)
T ss_dssp CCEEEEEECTTSTTC-CEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS--C-CEEEEEEEEEGGGSCTT--
T ss_pred CCCEEEEEEccCCCc-eEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC--C-CceeEEEEEEHHHccCC--
Confidence 456888877532211 11122 223357899999888884 4467789999887653 4 78999999999998643
Q ss_pred cchhhccc
Q 014267 87 LTMEREIE 94 (427)
Q Consensus 87 Ls~Ekw~e 94 (427)
-..+.|++
T Consensus 101 ~~~~~~~~ 108 (126)
T 1rlw_A 101 EKKEVPFI 108 (126)
T ss_dssp CEEEEEEE
T ss_pred CcEEEEEE
Confidence 34456665
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=89.79 E-value=0.61 Score=37.71 Aligned_cols=49 Identities=16% Similarity=0.168 Sum_probs=40.9
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCC
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRA 84 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~ 84 (427)
.+|.|.....|........|.|+|..+.. +.+...||.+.|++.+|...
T Consensus 56 ~nP~wne~f~f~~~~~~~~l~i~V~d~d~--~~~~~~lG~~~i~l~~l~~~ 104 (133)
T 2ep6_A 56 LNPEWNKVFTFPIKDIHDVLEVTVFDEDG--DKPPDFLGKVAIPLLSIRDG 104 (133)
T ss_dssp SSCCCCEEEEEEESCTTCEEEEEEEEEET--TEEEEECCBCEEEGGGCCSS
T ss_pred CCCccccEEEEEecCCCCEEEEEEEECCC--CCCCCeeEEEEEEHHHccCC
Confidence 57899999899887667789999987765 45688999999999999754
No 9
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=87.10 E-value=1.2 Score=35.71 Aligned_cols=56 Identities=13% Similarity=0.259 Sum_probs=42.8
Q ss_pred cccccceEEEEEEeccC--CcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEFGT--KGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~T--ggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.+...|...... ..|.|+|..+.. +.+...||.+.|++.+|.... .+.|++
T Consensus 64 ~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~--~~~~~~iG~~~i~l~~l~~~~---~~~W~~ 121 (137)
T 3rdl_A 64 LNPQWNESFTFKLKPSDKDRRLSVEIWDWDR--TTRNDFMGSLSFGVSELMKMP---ASGWYK 121 (137)
T ss_dssp SSCEEEEEEEEECCGGGGGCEEEEEEEECCS--SSCCEEEEEEEEEHHHHHHSC---EEEEEE
T ss_pred CCCCcccEEEEEcCchhcCCEEEEEEEECCC--CCCCceEEEEEEeHHHhccCc---cCceEE
Confidence 57789998888875433 358888887654 567889999999999998765 567765
No 10
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=86.25 E-value=1.1 Score=39.06 Aligned_cols=67 Identities=19% Similarity=0.239 Sum_probs=50.0
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCC--Cccchhhccc-----ceeEEEeec
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRA--PSLTMEREIE-----QFRVVISIT 103 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~--~sLs~Ekw~e-----~LRVaaSiT 103 (427)
.+|.|.....|.-.. ...|.|+|.-... +.+...||.+.|++++|... +.-..+.|++ +|+|.+.++
T Consensus 83 lnP~WNE~F~f~v~~-~~~L~~~V~D~d~--~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~~G~i~l~l~~~ 156 (157)
T 2fk9_A 83 NKPTYNEEFCANVTD-GGHLELAVFHETP--LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEPEGKVFVVITLT 156 (157)
T ss_dssp SSCEEEEEEEEEEEE-ECEEEEEEEECCS--SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBSSCEEEEEEEEC
T ss_pred CCCccCcEEEEEcCC-CCEEEEEEEECCC--CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCCCcEEEEEEEEE
Confidence 468999998888764 5678888876433 45678999999999999865 4445678887 677766654
No 11
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=85.38 E-value=1.8 Score=35.92 Aligned_cols=57 Identities=12% Similarity=0.193 Sum_probs=42.8
Q ss_pred cccccceEEEEEEec---cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.+...|.+.. ....|.|+|..+.. +.+...||.+.|++.++.... ..+.|++
T Consensus 88 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--~~~~~~iG~~~i~l~~l~~~~--~~~~W~~ 147 (152)
T 1rsy_A 88 LNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR--FSKHDIIGEFKVPMNTVDFGH--VTEEWRD 147 (152)
T ss_dssp SSCEEEEEEEECCCHHHHTTCEEEEEEEECCS--SSCCEEEEEEEEEGGGCCCSS--CEEEEEE
T ss_pred CCCcCcccEEEeecHHHcCCCEEEEEEEECCC--CCCCcEEEEEEEEchhccCCC--CcceEEE
Confidence 467899888887653 35789999987754 567889999999999985322 4567765
No 12
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=85.23 E-value=1.2 Score=36.67 Aligned_cols=56 Identities=13% Similarity=0.233 Sum_probs=43.5
Q ss_pred cccccceEEEEEEecc--CCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEFG--TKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~--TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.+...|.+... ...|.|+|..+.. +.+..+||.+.|++.+|...+ .+.|++
T Consensus 79 ~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~--~~~~~~iG~~~i~l~~l~~~~---~~~W~~ 136 (149)
T 1a25_A 79 LNPEWNETFRFQLKESDKDRRLSVEIWDWDL--TSRNDFMGSLSFGISELQKAG---VDGWFK 136 (149)
T ss_dssp SSCEEEEEEEEECCSGGGGCEEEEEEEECCS--SSCCEEEEEEEEEHHHHTTCC---EEEEEE
T ss_pred CCCcCCcEEEEEeccccCCCEEEEEEEECCC--CCCCCEEEEEEEEHHHhCcCc---cCCeEE
Confidence 4678999888887642 3578889887755 567789999999999998653 567765
No 13
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.23 E-value=1.6 Score=35.50 Aligned_cols=59 Identities=14% Similarity=0.150 Sum_probs=41.9
Q ss_pred cccccceEEEEEEec---cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.....|...+ ....|.|+|..+.....+...+||.+.|++.++.... ..+.|++
T Consensus 71 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~--~~~~W~~ 132 (142)
T 2dmg_A 71 LNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAK--GWTQWYD 132 (142)
T ss_dssp SSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTT--CBCCBCC
T ss_pred CCCCcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccc--cccceee
Confidence 467899887777643 3458999998876522223469999999999986544 4566765
No 14
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.03 E-value=2 Score=34.97 Aligned_cols=58 Identities=12% Similarity=0.062 Sum_probs=42.7
Q ss_pred ccccccceEEEEEEe----ccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 33 FSHNSWQKVWHLYCE----FGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 33 ~S~~~Wkk~~~fqCE----~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
-.+|.|.....|..- .....|.|+|..+.. +.+...||.+.|++.+|.... ..+.|++
T Consensus 71 t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~--~~~~~~iG~~~i~l~~l~~~~--~~~~W~~ 132 (141)
T 2d8k_A 71 NLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR--FSRNDPIGEVSIPLNKVDLTQ--MQTFWKD 132 (141)
T ss_dssp CSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS--SSSCEEEEEEEEETTTSCTTS--CEEEEEC
T ss_pred CCCCccccEEEECccCHHHcccCEEEEEEEECCC--CCCCcEEEEEEEEhhhhcCCC--CccEEEE
Confidence 357899988777631 135779999987765 567789999999999997654 3456665
No 15
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=83.71 E-value=1.7 Score=35.05 Aligned_cols=58 Identities=14% Similarity=0.144 Sum_probs=42.6
Q ss_pred cccccceEEEEEE----eccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYC----EFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqC----E~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.....|.+ +.....|.|+|..+..........||.+.|++.++.... .+.|++
T Consensus 69 ~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~---~~~W~~ 130 (141)
T 1v27_A 69 LEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD---EPHWYK 130 (141)
T ss_dssp SSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS---EEEEEE
T ss_pred CCCccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC---CCceEE
Confidence 4679998878874 224578999998876632224889999999999987543 567765
No 16
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=83.49 E-value=2.4 Score=33.65 Aligned_cols=83 Identities=11% Similarity=0.138 Sum_probs=48.6
Q ss_pred ccceeeeeehhhh-hccccCCc-cccccccccceEEEEEE----eccCCcEEEEEeccCCCCccCceeeeeEEeechhhc
Q 014267 9 KCDFLRLRMVRCH-RELKLGKP-ISSFSHNSWQKVWHLYC----EFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLL 82 (427)
Q Consensus 9 ~~~f~rlr~~~~~-~~lkld~~-~~~~S~~~Wkk~~~fqC----E~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll 82 (427)
.+-|+++.+.... ..-+--+. +..-.+|.|.....|.+ +.....|.|+|..+..........||.+.|++.++.
T Consensus 39 ~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~ 118 (129)
T 2bwq_A 39 RNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETAL 118 (129)
T ss_dssp BCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCC
T ss_pred CCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccC
Confidence 3557777663211 11111222 22335678998888874 223578999998776532224889999999999987
Q ss_pred CCCccchhhccc
Q 014267 83 RAPSLTMEREIE 94 (427)
Q Consensus 83 ~~~sLs~Ekw~e 94 (427)
... .+.|++
T Consensus 119 ~~~---~~~W~~ 127 (129)
T 2bwq_A 119 LDD---EPHWYK 127 (129)
T ss_dssp CSS---CEEEEE
T ss_pred CCc---CCccEE
Confidence 643 566754
No 17
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=82.50 E-value=2.9 Score=34.82 Aligned_cols=59 Identities=10% Similarity=0.173 Sum_probs=43.4
Q ss_pred cccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEeech----------hhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFRWN----------NLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~sw~----------dll~~~sLs~Ekw~e 94 (427)
.+|.|.....|.+... ...|.|+|..+.. +.+...||.+.|++. +++..+.-.++.|..
T Consensus 73 ~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~--~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~ 144 (159)
T 1tjx_A 73 LNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK--IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHT 144 (159)
T ss_dssp SSCEEEEEEEEECCGGGGGGCEEEEEEEECCS--SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CCCcccceEEEEcCHHHhCCcEEEEEEEECCC--CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEE
Confidence 5678999888887643 4568899887765 567889999999987 555555445566654
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=82.45 E-value=2.2 Score=34.66 Aligned_cols=57 Identities=11% Similarity=0.156 Sum_probs=41.6
Q ss_pred cccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.+...|.+... ...|.|+|..+.. +.+...||.+.|++.+|.... ..+.|++
T Consensus 80 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--~~~~~~iG~~~i~l~~l~~~~--~~~~W~~ 139 (143)
T 3f04_A 80 LNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR--FSKHDIIGEFKVPMNTVDFGH--VTEEWRD 139 (143)
T ss_dssp SSCEEEEEEEECCCHHHHTTCEEEEEEEECCS--SSCCEEEEEEEEEGGGCCTTS--CEEEEEE
T ss_pred CCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC--CCCCceEEEEEEEHHHccCCC--CcceEEE
Confidence 5678999888887542 3678888887655 567889999999999986432 2345653
No 19
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=80.45 E-value=2.3 Score=36.26 Aligned_cols=82 Identities=10% Similarity=0.018 Sum_probs=53.8
Q ss_pred ccceeeeeehhhhhc-cccCCcc-ccccccccceEEEEEEeccCCcEEEEEe-ccCCCCccCceeeeeEEeechhhcCCC
Q 014267 9 KCDFLRLRMVRCHRE-LKLGKPI-SSFSHNSWQKVWHLYCEFGTKGLILELR-HPGGTCFKGSTLQGTVEFRWNNLLRAP 85 (427)
Q Consensus 9 ~~~f~rlr~~~~~~~-lkld~~~-~~~S~~~Wkk~~~fqCE~~TggLvlElr-~~~~~~~k~sK~lG~~s~sw~dll~~~ 85 (427)
.+-||++.+....+. -+--+.+ ..-.+|.|.....|...+....|.|+|. .+.. +.+...||.+.|++.++....
T Consensus 52 ~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~--~~~d~~iG~~~i~l~~l~~~~ 129 (171)
T 2q3x_A 52 PAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR--MDHKCFMGVAQILLEELDLSS 129 (171)
T ss_dssp CEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST--TCSSEEEEEEEECGGGSCTTS
T ss_pred CCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC--CCCCCEEEEEEEEHHHcccCC
Confidence 355777766432111 1112222 2224679999888888777788999998 4433 567789999999999997433
Q ss_pred ccchhhccc
Q 014267 86 SLTMEREIE 94 (427)
Q Consensus 86 sLs~Ekw~e 94 (427)
..+.|++
T Consensus 130 --~~~~W~~ 136 (171)
T 2q3x_A 130 --MVIGWYK 136 (171)
T ss_dssp --CEEEEEE
T ss_pred --CcceeEE
Confidence 3567876
No 20
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=79.92 E-value=1.8 Score=34.61 Aligned_cols=70 Identities=6% Similarity=0.144 Sum_probs=45.2
Q ss_pred ccceeeeeehhhhh-ccccCCc-cccccccccceEEEEEEeccC---CcEEEEEeccCCCCccCceeeeeEEeechh
Q 014267 9 KCDFLRLRMVRCHR-ELKLGKP-ISSFSHNSWQKVWHLYCEFGT---KGLILELRHPGGTCFKGSTLQGTVEFRWNN 80 (427)
Q Consensus 9 ~~~f~rlr~~~~~~-~lkld~~-~~~~S~~~Wkk~~~fqCE~~T---ggLvlElr~~~~~~~k~sK~lG~~s~sw~d 80 (427)
.+-|+++.+.--.+ .-+--+. +..-.+|.|.+...|.+.... ..|.|+|..+.. +.+...||.+.|++++
T Consensus 37 ~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~--~~~~~~lG~~~i~l~~ 111 (138)
T 3n5a_A 37 SDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK--LSRNDVIGKIYLSWKS 111 (138)
T ss_dssp CCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS--SSCCEEEEEEEESSSS
T ss_pred cCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC--CCCCcEEEEEEEcccc
Confidence 35577766642111 1122222 333357799998888876544 568888887655 5678899999999885
No 21
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=78.50 E-value=4.6 Score=33.90 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=36.5
Q ss_pred cccccceEEEEEEec---cCCcEEEEEeccCCCCccCceeeeeEEeechhh
Q 014267 34 SHNSWQKVWHLYCEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNL 81 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dl 81 (427)
.+|.|.....|.+.. ....|.|+|..+.. +.+...||.+.|++.++
T Consensus 85 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 85 LNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI--GKSNDYIGGCQLGISAK 133 (166)
T ss_dssp SSCEEEEEEEEECCGGGGGGCEEEEEEEECCS--SSCCEEEEEEEEETTCC
T ss_pred CCCcccceEEEEcchHhcCCCEEEEEEEECCC--CCCCcEEEeEEEecccC
Confidence 467999988888864 35688999887755 56778999999998774
No 22
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=78.05 E-value=6.4 Score=31.83 Aligned_cols=50 Identities=10% Similarity=0.210 Sum_probs=37.9
Q ss_pred cccccceEEEEE-Eec---cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCC
Q 014267 34 SHNSWQKVWHLY-CEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAP 85 (427)
Q Consensus 34 S~~~Wkk~~~fq-CE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~ 85 (427)
.+|.|.+...|+ ... ....|.|+|..+.. +.+...||.+.|++++|....
T Consensus 69 ~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~--~~~~~~lG~~~i~l~~l~~~~ 122 (138)
T 1ugk_A 69 LDPAFDETFTFYGIPYTQIQELALHFTILSFDR--FSRDDIIGEVLIPLSGIELSE 122 (138)
T ss_dssp SSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS--SCCCCCCEEEEEECTTCCCTT
T ss_pred CCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC--CCCCcEEEEEEEehhHccCCC
Confidence 468899988885 332 34678899887665 567789999999999997543
No 23
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=75.10 E-value=9.5 Score=31.07 Aligned_cols=57 Identities=5% Similarity=0.096 Sum_probs=41.9
Q ss_pred cccccceEEEEE-Eec---cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLY-CEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fq-CE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.+...|. +.. ....|.|+|..... +.+...||.+.|++.+|.... ..+.|++
T Consensus 67 ~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~--~~~~~~lG~~~i~l~~l~~~~--~~~~W~~ 127 (134)
T 2b3r_A 67 RNPTFNEMLVYSGYSKETLRQRELQLSVLSAES--LRENFFLGGITLPLKDFNLSK--ETVKWYQ 127 (134)
T ss_dssp SSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS--SSCCEEEEEEEEEGGGSCTTS--CEEEEEE
T ss_pred CCCCCccEEEECCcCHHHhCcCEEEEEEEECCC--CCCCcEEEEEEEEhhhccCCC--CcceeEE
Confidence 467899877777 543 35789999987754 556789999999999996533 2356664
No 24
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=74.61 E-value=6.1 Score=32.65 Aligned_cols=49 Identities=22% Similarity=0.305 Sum_probs=40.7
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCC
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAP 85 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~ 85 (427)
.+|.|...-.|........|.|+|..+. +.+...||.+.|+++++....
T Consensus 44 ~nP~WnE~f~f~v~~~~~~L~~~V~D~d---~~~dd~iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 44 SQPSWEQDFMFEINRLDLGLTVEVWNKG---LIWDTMVGTVWIPLRTIRQSN 92 (131)
T ss_dssp SSCEEEEEEEEEECCCSSEEEEEEEECC---SSCEEEEEEEEEEGGGSCBCS
T ss_pred CCceECCEEEEEEeCCCCeEEEEEEECC---CCCCCeEEEEEEEHHHhhhcC
Confidence 4789999988888766778999998775 457899999999999987544
No 25
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=73.59 E-value=6 Score=32.57 Aligned_cols=69 Identities=3% Similarity=0.016 Sum_probs=43.4
Q ss_pred cceeeeeehhhhh-ccccCCc-cccccccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEeechh
Q 014267 10 CDFLRLRMVRCHR-ELKLGKP-ISSFSHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFRWNN 80 (427)
Q Consensus 10 ~~f~rlr~~~~~~-~lkld~~-~~~~S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~sw~d 80 (427)
+-|+++.+.-..+ ..+--+. +..-.+|.|.....|.+... ...|.|+|..+.. +.+...||.+.|++++
T Consensus 52 dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~--~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 52 DPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER--GSRNEVIGRLVLGATA 125 (153)
T ss_dssp CEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT--TSCCEEEEEEEESTTC
T ss_pred CeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC--CCCCcEEEEEEECCCC
Confidence 5566666532111 1122222 22334678999888887653 2568888887654 5677899999999877
No 26
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=73.31 E-value=14 Score=33.20 Aligned_cols=57 Identities=11% Similarity=0.157 Sum_probs=41.8
Q ss_pred cccccceEEEEEEec---cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.+...|...+ ....|.|+|..+.. +.+...||.+.|++.++.... ..+.|++
T Consensus 65 ~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~--~~~~~~lG~~~i~l~~l~~~~--~~~~w~~ 124 (284)
T 2r83_A 65 LNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR--FSKHDIIGEFKVPMNTVDFGH--VTEEWRD 124 (284)
T ss_dssp SSCEEEEEEEECCCGGGCTTCEEEEEEEECCS--SSCCCEEEEEEEEGGGCCCSS--CEEEEEE
T ss_pred CCCeeCceEEEEechHHhCcCEEEEEEEECCC--CCCCceeEEEEEcchhcccCC--cceeEEE
Confidence 477899988887654 24678888887654 567789999999999986543 3355654
No 27
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=73.00 E-value=10 Score=30.41 Aligned_cols=47 Identities=17% Similarity=0.333 Sum_probs=36.8
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCCC-ccCceeeeeEEeechhh
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGTC-FKGSTLQGTVEFRWNNL 81 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~-~k~sK~lG~~s~sw~dl 81 (427)
.+|.|.+...|++.. ...|.|+|..+.... ......||.+.|+++++
T Consensus 50 ~nP~wne~f~f~v~~-~~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l 97 (132)
T 3pyc_A 50 LDPKWNQHYDLYVGK-TDSITISVWNHKKIHKKQGAGFLGCVRLLSNAI 97 (132)
T ss_dssp SSCEEEEEEEEEEET-TCCEEEEEEEGGGTTSSTTTTEEEEEEECHHHH
T ss_pred CCCCccCEEEEEeCC-CCEEEEEEEECCCCCCCCCCCceEEEEEeHHHh
Confidence 567899999999986 556999998775522 12368999999999988
No 28
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.87 E-value=4.8 Score=32.91 Aligned_cols=74 Identities=8% Similarity=0.141 Sum_probs=48.2
Q ss_pred ccceeeeeehhhhhccccCCc-cccccccccceEEEEEEec---cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCC
Q 014267 9 KCDFLRLRMVRCHRELKLGKP-ISSFSHNSWQKVWHLYCEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRA 84 (427)
Q Consensus 9 ~~~f~rlr~~~~~~~lkld~~-~~~~S~~~Wkk~~~fqCE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~ 84 (427)
.+-|+++.+.-..+. +.-+. +..-.+|.|.....|.... ....|.|+|..+.. +.+..+||.+.|++.+|...
T Consensus 54 ~dpyv~v~l~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~--~~~~~~iG~~~i~l~~l~~~ 130 (147)
T 2enp_A 54 SNPYVKICLLPDQKN-SKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDK--FSRHCVIGKVSVPLCEVDLV 130 (147)
T ss_dssp CCCEEEEEEETCCSS-CEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCST--TCCSCCCEEEEEETTTSCTT
T ss_pred CCcEEEEEEEeCCCc-ceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCC--CcCCcEEEEEEEechhcCCC
Confidence 466777776521111 11222 2233467999988887653 34678999987755 56677999999999998644
Q ss_pred C
Q 014267 85 P 85 (427)
Q Consensus 85 ~ 85 (427)
.
T Consensus 131 ~ 131 (147)
T 2enp_A 131 K 131 (147)
T ss_dssp T
T ss_pred C
Confidence 3
No 29
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=71.29 E-value=11 Score=32.58 Aligned_cols=48 Identities=15% Similarity=0.246 Sum_probs=40.8
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCC
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRA 84 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~ 84 (427)
.+|.|.+...|.+.+ ...|.|+|..+.. +.+...||.+.|++.+|+..
T Consensus 79 lnP~Wne~f~f~v~~-~~~L~~~V~D~d~--~~~dd~lG~~~i~l~~l~~~ 126 (173)
T 2nq3_A 79 NSPKWKQPLTVIVTP-VSKLHFRVWSHQT--LKSDVLLGTAALDIYETLKS 126 (173)
T ss_dssp SSCEEEEEEEEEECT-TCEEEEEEEECCS--SSCCEEEEEEEEEHHHHHHH
T ss_pred CCCeECCEEEEEeCC-CCEEEEEEEECCC--CCCCceEEEEEEEHHHhccc
Confidence 467999999999985 8899999987755 56788999999999999854
No 30
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=67.60 E-value=11 Score=30.85 Aligned_cols=82 Identities=10% Similarity=0.140 Sum_probs=51.0
Q ss_pred ccceeeeeehhhhh-ccccCCc-cccccccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEeechhhcC
Q 014267 9 KCDFLRLRMVRCHR-ELKLGKP-ISSFSHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLR 83 (427)
Q Consensus 9 ~~~f~rlr~~~~~~-~lkld~~-~~~~S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~ 83 (427)
.+-|+++.+..-.+ .-+--+. +..-.+|.|.+...|..... ...|.|+|..+.. +.+...||.+.|++.++..
T Consensus 45 ~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~--~~~~~~iG~~~i~l~~l~~ 122 (148)
T 3fdw_A 45 SNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR--FGRNTFLGEAEIQMDSWKL 122 (148)
T ss_dssp CCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG--GGCEEEEEEEEEEHHHHHH
T ss_pred CCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC--CcCCcEEEEEEEEcccccc
Confidence 45577776642111 1112222 22235678999888886542 3458888886544 5678899999999999964
Q ss_pred CCccchhhccc
Q 014267 84 APSLTMEREIE 94 (427)
Q Consensus 84 ~~sLs~Ekw~e 94 (427)
.. ..+.|++
T Consensus 123 ~~--~~~~W~~ 131 (148)
T 3fdw_A 123 DK--KLDHCLP 131 (148)
T ss_dssp HC--CSEEEEE
T ss_pred cC--CccceEE
Confidence 33 2346665
No 31
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=67.27 E-value=9.3 Score=33.19 Aligned_cols=49 Identities=22% Similarity=0.305 Sum_probs=40.6
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCC
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAP 85 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~ 85 (427)
.+|.|...-.|........|.|+|..+. +.+...||.+.|+++++....
T Consensus 53 ~nP~WnE~f~f~v~~~~~~L~~~V~D~d---~~~dd~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 53 SQPSWEQDFMFEINRLDLGLTVEVWNKG---LIWDTMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp SSCEEEEEEEEECCCTTSEEEEEEEECC---SSCCEEEEEEEEEGGGSCBCS
T ss_pred CCCCCCCEEEEEeeCCCCEEEEEEEECC---CCCCceEEEEEEEHHHhcccC
Confidence 4789999988888766778999998875 457899999999999987543
No 32
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=65.14 E-value=8.1 Score=32.03 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=41.6
Q ss_pred cccccccceEEEEEE--eccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 32 SFSHNSWQKVWHLYC--EFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 32 ~~S~~~Wkk~~~fqC--E~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.-.+|.|.....|.. +.....|.|+|...... .++...||.+.|++.+|..+. -..+.|+.
T Consensus 72 ~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~-~~~d~~lG~~~i~l~~l~~~~-~~~~~W~~ 134 (153)
T 3fbk_A 72 DCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQ-SRQSGLIGCMSFGVKSLLTPD-KEISGWYY 134 (153)
T ss_dssp TCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSS-GGGCEEEEEEEEEHHHHTC---CCEEEEEE
T ss_pred CCCCCccccEEEEecccHHhCCEEEEEEEeCCCC-CCCCcEEEEEEEEHHHhcCCC-CccccEEE
Confidence 335678999888876 33345688888765441 234789999999999997633 34556765
No 33
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=64.28 E-value=11 Score=31.95 Aligned_cols=83 Identities=10% Similarity=0.129 Sum_probs=51.4
Q ss_pred ccceeeeeehhh--hhccccCCc-cccccccccceEEEEEEec---cCCcEEEEEeccCCCCccCceeeeeEEeechhhc
Q 014267 9 KCDFLRLRMVRC--HRELKLGKP-ISSFSHNSWQKVWHLYCEF---GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLL 82 (427)
Q Consensus 9 ~~~f~rlr~~~~--~~~lkld~~-~~~~S~~~Wkk~~~fqCE~---~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll 82 (427)
.+-||++.+.-+ .+..+.-+. +..-.+|.|.....|.... ....|.|+|..+.. +.+...||.+.|++++|.
T Consensus 64 sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~--~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 64 QKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR--SHLEECLGGAQISLAEVC 141 (155)
T ss_dssp SEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT--TSCEEEEEEEEEECTTSC
T ss_pred CCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC--CCCCcEEEEEEEEHHHcc
Confidence 355777776432 111122222 3333567899987777543 24678899887755 567889999999999986
Q ss_pred CCCccchhhccc
Q 014267 83 RAPSLTMEREIE 94 (427)
Q Consensus 83 ~~~sLs~Ekw~e 94 (427)
.. .-..+.|++
T Consensus 142 ~~-~~~~~~W~~ 152 (155)
T 2z0u_A 142 RS-GERSTRWYN 152 (155)
T ss_dssp TT-CCCEEEEEE
T ss_pred CC-CCccccceE
Confidence 31 223355654
No 34
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=62.72 E-value=7.3 Score=31.54 Aligned_cols=50 Identities=14% Similarity=0.260 Sum_probs=37.3
Q ss_pred cccccceEEEEE-Ee---ccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCC
Q 014267 34 SHNSWQKVWHLY-CE---FGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAP 85 (427)
Q Consensus 34 S~~~Wkk~~~fq-CE---~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~ 85 (427)
.+|.|.....|. -. .....|.|+|..+.. +.+...||.+.|++++|....
T Consensus 77 ~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~--~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 77 RNPVWNETLQYHGITEEDMQRKTLRISVCDEDK--FGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp SSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT--TSCEEEEEEEEEEGGGCCTTC
T ss_pred CCCcCcCEEEEcccCHHHccCCEEEEEEEECCC--CCCCcEEEEEEEEHHHcCCCC
Confidence 467899877665 21 113679999987765 556789999999999987554
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=60.84 E-value=14 Score=30.04 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=50.1
Q ss_pred ccceeeeeehhhhhccccCCc-cccccccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEeechhhcCC
Q 014267 9 KCDFLRLRMVRCHRELKLGKP-ISSFSHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRA 84 (427)
Q Consensus 9 ~~~f~rlr~~~~~~~lkld~~-~~~~S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~ 84 (427)
.+-||++.+.-....-+.-+. +..-.+|.|.....|...+. ...|.|+|..+.. +.+...||.+.|++.++...
T Consensus 44 sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~--~~~dd~lG~~~i~l~~l~~~ 121 (138)
T 1wfm_A 44 CDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR--FSRHSVAGELRLGLDGTSVP 121 (138)
T ss_dssp CCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS--SCTTSCSEEEEEESSSSSSC
T ss_pred cceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC--CCCCcEEEEEEEEcccccCc
Confidence 355777766321011111233 22334678998878876542 4578888887654 56778999999999998422
Q ss_pred Cccchhhccc
Q 014267 85 PSLTMEREIE 94 (427)
Q Consensus 85 ~sLs~Ekw~e 94 (427)
. ..+.|++
T Consensus 122 ~--~~~~W~~ 129 (138)
T 1wfm_A 122 L--GAAQWGE 129 (138)
T ss_dssp T--TCCEEEE
T ss_pred c--cccceee
Confidence 2 3455654
No 36
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=60.57 E-value=10 Score=34.02 Aligned_cols=84 Identities=10% Similarity=0.167 Sum_probs=50.3
Q ss_pred ccceeeeeehhhhh-ccccCCcc-ccccccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEeechh---
Q 014267 9 KCDFLRLRMVRCHR-ELKLGKPI-SSFSHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFRWNN--- 80 (427)
Q Consensus 9 ~~~f~rlr~~~~~~-~lkld~~~-~~~S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~sw~d--- 80 (427)
.+-||++.+....+ ..+--+.+ ..-.+|.|...-.|.+... ...|.|+|..+.. +.+...||.+.|+++.
T Consensus 171 ~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~--~~~~~~iG~~~i~l~~~~~ 248 (284)
T 2r83_A 171 SDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK--IGKNDAIGKVFVGYNSTGA 248 (284)
T ss_dssp CCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCS--SSCCCEEEEEEEETTCCHH
T ss_pred cCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCC--CCCCcEEEEEEECCCCCCc
Confidence 35577766542111 11222222 2224678998888887543 3458888887755 6678899999999753
Q ss_pred -------hcCCCccchhhccc
Q 014267 81 -------LLRAPSLTMEREIE 94 (427)
Q Consensus 81 -------ll~~~sLs~Ekw~e 94 (427)
++..+.-.++.|..
T Consensus 249 ~~~~w~~~~~~~~~~~~~W~~ 269 (284)
T 2r83_A 249 ELRHWSDMLANPRRPIAQWHT 269 (284)
T ss_dssp HHHHHHHHHHSTTSCEEEEEE
T ss_pred HHHHHHHHHHCCCCchheeee
Confidence 44444444556653
No 37
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=59.76 E-value=9.4 Score=30.78 Aligned_cols=57 Identities=12% Similarity=0.113 Sum_probs=40.8
Q ss_pred cccccceEEEEE-Ee---ccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLY-CE---FGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fq-CE---~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|...-.|. .. .....|.|+|..+.. +.+...||.+.|++.++.... ..+.|++
T Consensus 75 ~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~--~~~~~~lG~~~i~l~~l~~~~--~~~~W~~ 135 (142)
T 1rh8_A 75 LNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR--FSSNDFLGEVLIDLSSTSHLD--NTPRWYP 135 (142)
T ss_dssp HSCEEEEEEEECSCCHHHHTTCEEEEEEEEECS--SSCEEEEEEEEEETTSCGGGT--TCCEEEE
T ss_pred CCCCCCCEEEECCcCHHHccCCEEEEEEEECCC--CCCCceEEEEEEeccccccCC--CCCeEEE
Confidence 467899876664 22 146789999988765 567789999999999986432 2346654
No 38
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=58.19 E-value=14 Score=36.02 Aligned_cols=59 Identities=15% Similarity=0.157 Sum_probs=42.7
Q ss_pred cccccceEEEEEEeccC-CcEEEEEeccCCCCccCceeeeeEEeechhhcCCCc--cchhhccc
Q 014267 34 SHNSWQKVWHLYCEFGT-KGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPS--LTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~T-ggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~s--Ls~Ekw~e 94 (427)
.+|.|.....|...... ..|.|+|..+.. +.+...+|.+.+++.++..... -.++.|+.
T Consensus 430 ~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~--~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~ 491 (510)
T 3jzy_A 430 LNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ--FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLL 491 (510)
T ss_dssp SSCEEEEEEEEEESCTTTCEEEEEEEECCS--SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEE
T ss_pred CCCccCceEEEEecCCCCCEEEEEEEeCCC--CCCCCceEEEEEEHHHhccccCCCCceeeeec
Confidence 56789998888886543 348888876654 5678899999999999985331 33555654
No 39
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=54.57 E-value=8 Score=34.40 Aligned_cols=26 Identities=12% Similarity=0.216 Sum_probs=22.3
Q ss_pred ccCceeeeeEEeechhhcCCCccchh
Q 014267 65 FKGSTLQGTVEFRWNNLLRAPSLTME 90 (427)
Q Consensus 65 ~k~sK~lG~~s~sw~dll~~~sLs~E 90 (427)
+.+.++||++.+++++|.....|++.
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~ 117 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVS 117 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEE
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEe
Confidence 45789999999999999998877664
No 40
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=53.23 E-value=1.2e+02 Score=26.93 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=14.8
Q ss_pred EEeecccceEEEecCCchHHHHHHHHH
Q 014267 306 ALLNWKLLVIELLPEEDAVLALLLCFS 332 (427)
Q Consensus 306 ALlnwKs~~vEv~pEEd~vLvllL~~s 332 (427)
++++=..-.|+|-|+.|..|++.|++.
T Consensus 180 ~~~~~D~y~l~V~p~~D~aliialvv~ 206 (217)
T 1zxu_A 180 VFLGKDNFSVTVYPNVDYAFIASLVVI 206 (217)
T ss_dssp ---CBCSEEEEECTTSBHHHHHHHHHH
T ss_pred cccCCcEEEEEECCCCCHHHHHHHHHH
Confidence 344445566888788886554444433
No 41
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=37.46 E-value=1.4e+02 Score=27.17 Aligned_cols=47 Identities=13% Similarity=0.200 Sum_probs=35.3
Q ss_pred cccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEee-chhhc
Q 014267 34 SHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFR-WNNLL 82 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~s-w~dll 82 (427)
.+|.|.+...|.+.+. ...|.|+|..+.. +.+...||.+.|+ +.++.
T Consensus 66 ~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~--~~~~~~iG~~~i~~l~~~~ 116 (296)
T 1dqv_A 66 LNPIFNETFQFSVPLAELAQRKLHFSVYDFDR--FSRHDLIGQVVLDNLLELA 116 (296)
T ss_dssp SSCEEEEEEEEECCGGGGSSCCCEEEEEECCS--SSCCCEEEEEECCCTTGGG
T ss_pred CCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC--CCCCceEEEEEeccccccc
Confidence 5779999988887543 4579999987654 5677899999995 44444
No 42
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=34.28 E-value=7 Score=39.39 Aligned_cols=59 Identities=14% Similarity=0.059 Sum_probs=9.1
Q ss_pred cccccceEEEEEEeccCCcEEEEEeccCC--CCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEFGTKGLILELRHPGG--TCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~TggLvlElr~~~~--~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.....|.+.+....|.++|..+.. ..+.+...||.+.|++++|.... ..+.|++
T Consensus 53 lnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~--~~~~W~~ 113 (483)
T 3bxj_A 53 DTVFWGEHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRH--FTEQWYP 113 (483)
T ss_dssp ------CCEECC--------------------------------------------CCEECC-
T ss_pred CCCccccEEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCC--CCCeEEE
Confidence 36789999999887777788888876422 12456779999999999987433 3566765
No 43
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=33.94 E-value=8.6 Score=29.84 Aligned_cols=12 Identities=33% Similarity=0.401 Sum_probs=10.2
Q ss_pred EEecCCCCCCce
Q 014267 293 VRFTDENPTGKA 304 (427)
Q Consensus 293 Vrfs~e~P~GKA 304 (427)
-|||||++|||-
T Consensus 34 arfSp~Dky~~y 45 (60)
T 2apo_B 34 PKFSLEDRWGKY 45 (60)
T ss_dssp CCCCTTCTTHHH
T ss_pred CCCCCCcchHHH
Confidence 389999999973
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=31.31 E-value=15 Score=33.65 Aligned_cols=46 Identities=7% Similarity=0.024 Sum_probs=32.5
Q ss_pred cccccceEEEEEEecc---CCcEEEEEeccCCCCccCceeeeeEEeechhh
Q 014267 34 SHNSWQKVWHLYCEFG---TKGLILELRHPGGTCFKGSTLQGTVEFRWNNL 81 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~~---TggLvlElr~~~~~~~k~sK~lG~~s~sw~dl 81 (427)
.+|.|.....|..... ...|.|+|..+.. +.+...||.+.|+++++
T Consensus 200 ~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~--~~~~~~iG~~~i~l~~~ 248 (296)
T 1dqv_A 200 LNPTYNEALVFDVAPESVENVGLSIAVVDYDC--IGHNEVIGVCRVGPEAA 248 (296)
T ss_dssp SSCEEEECCCCCCCSGGGGSCCCCCEEEECCS--SSCCEEEEECCCSSCTT
T ss_pred CCCeECceEEEEcCHHHccCcEEEEEEEeCCC--CCCCceEEEEEECCccC
Confidence 4678888666665432 2468888887755 56788999999986543
No 45
>1y2y_A Ribosome biogenesis protein NOP10; box H/ACA snoRNA,snoRNP, pseudouridine, biosynthetic protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.16.1 PDB: 3u28_B 3uai_B 2aqa_A
Probab=30.89 E-value=13 Score=28.95 Aligned_cols=11 Identities=18% Similarity=0.540 Sum_probs=10.0
Q ss_pred EecCCCCCCce
Q 014267 294 RFTDENPTGKA 304 (427)
Q Consensus 294 rfs~e~P~GKA 304 (427)
|||||++|||-
T Consensus 34 RFSPdDky~~y 44 (58)
T 1y2y_A 34 RFSPDDKYSRQ 44 (58)
T ss_dssp SSCSCTTCSCT
T ss_pred CCCCCcccHHH
Confidence 89999999984
No 46
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=30.29 E-value=11 Score=29.34 Aligned_cols=11 Identities=45% Similarity=0.896 Sum_probs=9.9
Q ss_pred EecCCCCCCce
Q 014267 294 RFTDENPTGKA 304 (427)
Q Consensus 294 rfs~e~P~GKA 304 (427)
|||||++|||-
T Consensus 34 rfSP~Dky~~y 44 (60)
T 2aus_D 34 RFSPEDPYGEY 44 (60)
T ss_dssp CCCSCCTTHHH
T ss_pred CCCCCCchHHH
Confidence 89999999974
No 47
>3iez_A RAS GTPase-activating-like protein iqgap2; structural genomics consortium, SGC, alternative splicing, calmodulin-binding, phosphoprotein; 1.50A {Homo sapiens} PDB: 4eza_A
Probab=25.22 E-value=83 Score=26.88 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=34.1
Q ss_pred ccccccccceE-EEEE-EeccCCcEEEEEeccCCCCccCceeeeeEEeechhhcCC
Q 014267 31 SSFSHNSWQKV-WHLY-CEFGTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRA 84 (427)
Q Consensus 31 ~~~S~~~Wkk~-~~fq-CE~~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~ 84 (427)
..++..+|+++ -.|- |+- .|-+.+|+... ....+++.++++|||..
T Consensus 39 ~g~~~~~~~~i~f~IsS~~e-~GvF~Ie~~~~-------gi~~~~~~l~ldDLLq~ 86 (114)
T 3iez_A 39 DDLQTNQFKNVTFDIIATED-VGIFDVRSKFL-------GVEMEKVQLNIQDLLQM 86 (114)
T ss_dssp TTCCGGGGGGEEEEEEECSS-TTEEEEEEEET-------TEEEEEEEEEHHHHHHH
T ss_pred cCCChhhcceEEEEEEeCCC-CeEEEEEEEEC-------CcceeEEEeeHHHHHHH
Confidence 45566689987 4454 884 89888887752 25689999999999943
No 48
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=24.68 E-value=1.2e+02 Score=32.98 Aligned_cols=56 Identities=13% Similarity=0.146 Sum_probs=42.5
Q ss_pred cccccceEEEEEEec-cCCcEEEEEeccCCCCccCceeeeeEEeechhhcCCCccchhhccc
Q 014267 34 SHNSWQKVWHLYCEF-GTKGLILELRHPGGTCFKGSTLQGTVEFRWNNLLRAPSLTMEREIE 94 (427)
Q Consensus 34 S~~~Wkk~~~fqCE~-~TggLvlElr~~~~~~~k~sK~lG~~s~sw~dll~~~sLs~Ekw~e 94 (427)
.+|.|.+...|.+.. ....|.|+|+.+.. +. ...||.+.|++.+|.... ..+.|++
T Consensus 67 lNPvWNEtF~F~v~~~~~~~L~~~V~D~D~--~~-ddfIG~v~I~L~~L~~g~--~~~~w~~ 123 (749)
T 1cjy_A 67 INPVWNETFEFILDPNQENVLEITLMDANY--VM-DETLGTATFTVSSMKVGE--KKEVPFI 123 (749)
T ss_dssp SSCEEEEEEEEEECTTSCCBCEEEEEECCS--SS-CEEEEEECCBSTTSCTTC--CCCEEEE
T ss_pred CCCeeeeEEEEEecCCCCCEEEEEEEECCC--CC-CceeEEEEEEHHHcCCCC--ceEEEEe
Confidence 467899988888875 46788999987765 44 889999999999985432 3355665
Done!