Your job contains 1 sequence.
>014268
MASLLRNASLLRRCLLSVSPPHPHPQSFRGGMLETSTQICNFSSKSKRKSKSDGSDSGEE
NMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGR
VVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPD
CGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSH
SLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI
GSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF
RGKEAFKQFLVENESVREELVIKLREKLVVDHKEPQTAVTDEDSTEETVSTISPDSTDEE
AAAVVEA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014268
(427 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050439 - symbol:RECA2 "A. thaliana recA homol... 1392 2.3e-142 1
TIGR_CMR|CBU_1054 - symbol:CBU_1054 "recA protein" specie... 926 5.5e-93 1
TIGR_CMR|CHY_1166 - symbol:CHY_1166 "recA protein" specie... 896 8.3e-90 1
TIGR_CMR|BA_3915 - symbol:BA_3915 "recA protein, group I ... 879 5.3e-88 1
TIGR_CMR|NSE_0530 - symbol:NSE_0530 "recA protein" specie... 870 4.7e-87 1
TIGR_CMR|SO_3430 - symbol:SO_3430 "recA protein" species:... 863 2.6e-86 1
UNIPROTKB|P45383 - symbol:recA "Protein RecA" species:243... 861 4.3e-86 1
TIGR_CMR|VC_0543 - symbol:VC_0543 "recA protein" species:... 861 4.3e-86 1
UNIPROTKB|P0A5U4 - symbol:recA "Protein RecA" species:177... 690 5.7e-86 2
TIGR_CMR|GSU_0145 - symbol:GSU_0145 "recA protein" specie... 859 6.9e-86 1
UNIPROTKB|P0A7G6 - symbol:recA species:83333 "Escherichia... 856 1.4e-85 1
TIGR_CMR|SPO_2034 - symbol:SPO_2034 "recA protein" specie... 856 1.4e-85 1
UNIPROTKB|P16971 - symbol:recA "Protein RecA" species:224... 855 1.8e-85 1
DICTYBASE|DDB_G0276073 - symbol:recA "recombinase A" spec... 854 2.4e-85 1
TIGR_CMR|CJE_1845 - symbol:CJE_1845 "recA protein" specie... 850 6.2e-85 1
TIGR_CMR|DET_1606 - symbol:DET_1606 "recA protein" specie... 806 2.9e-80 1
TIGR_CMR|ECH_1109 - symbol:ECH_1109 "recA protein" specie... 805 3.7e-80 1
TIGR_CMR|APH_1354 - symbol:APH_1354 "recA protein" specie... 785 4.8e-78 1
TAIR|locus:2100038 - symbol:RECA3 "RECA homolog 3" specie... 758 3.5e-75 1
TAIR|locus:2207445 - symbol:RECA1 "homolog of bacterial R... 721 2.9e-71 1
TAIR|locus:2103131 - symbol:AT3G32920 species:3702 "Arabi... 686 1.5e-67 1
UNIPROTKB|P78014 - symbol:recA "Protein RecA" species:272... 561 2.6e-54 1
DICTYBASE|DDB_G0274901 - symbol:DDB_G0274901 species:4468... 106 3.9e-07 2
GENEDB_PFALCIPARUM|PF11_0087 - symbol:PF11_0087 "Rad51 ho... 133 5.7e-06 1
UNIPROTKB|Q8IIS8 - symbol:Rad51 "Rad51 homolog" species:3... 133 5.7e-06 1
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 131 9.5e-06 1
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 127 2.5e-05 1
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 131 2.7e-05 1
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 131 2.7e-05 1
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 131 2.7e-05 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 124 5.5e-05 1
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 119 0.00022 1
UNIPROTKB|B6JXU7 - symbol:SJAG_01410 "DNA repair protein ... 119 0.00024 1
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 119 0.00026 1
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 119 0.00026 1
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 118 0.00027 1
UNIPROTKB|F1N1D2 - symbol:DMC1 "Uncharacterized protein" ... 116 0.00044 1
MGI|MGI:105393 - symbol:Dmc1 "DMC1 dosage suppressor of m... 116 0.00044 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 116 0.00058 1
UNIPROTKB|Q14565 - symbol:DMC1 "Meiotic recombination pro... 114 0.00073 1
UNIPROTKB|F1SKQ1 - symbol:DMC1 "Uncharacterized protein" ... 114 0.00073 1
POMBASE|SPAC644.14c - symbol:rad51 "RecA family recombina... 114 0.00083 1
UNIPROTKB|E2RK50 - symbol:DMC1 "Uncharacterized protein" ... 113 0.00095 1
>TAIR|locus:2050439 [details] [associations]
symbol:RECA2 "A. thaliana recA homolog 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA;ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0009432 "SOS response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006281 EMBL:AC005917
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
UniGene:At.66366 eggNOG:COG0468 EMBL:BT029745 IPI:IPI00520863
PIR:D84577 RefSeq:NP_179539.2 ProteinModelPortal:Q9ZUP2 SMR:Q9ZUP2
STRING:Q9ZUP2 PaxDb:Q9ZUP2 PRIDE:Q9ZUP2 EnsemblPlants:AT2G19490.1
GeneID:816468 KEGG:ath:AT2G19490 GeneFarm:2671 TAIR:At2g19490
HOGENOM:HOG000264120 InParanoid:Q9ZUP2 KO:K03553 OMA:KAFFREH
PhylomeDB:Q9ZUP2 ProtClustDB:CLSN2681153 Genevestigator:Q9ZUP2
GermOnline:AT2G19490 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
Uniprot:Q9ZUP2
Length = 430
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 277/398 (69%), Positives = 320/398 (80%)
Query: 29 RGGMLETSTQICNFXXXXXXXXXXXXXXXXEENMSKKDLALQQALDQITSSFGKGSIMWL 88
R ++ TS Q+ F EE MSKK++ALQQALDQITSSFGKGSIM+L
Sbjct: 22 RRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEIALQQALDQITSSFGKGSIMYL 81
Query: 89 GRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGG 148
GR+V+PR+VPV STGSFALD+ALG GGLPKGRVVEIYGPEASGKTTLALHVIAEAQ+QGG
Sbjct: 82 GRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGG 141
Query: 149 YCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXX 208
CVF+DAEHALD SLA+ IGV TENLLL+QPDCGEQALSLVDTLIRSG
Sbjct: 142 TCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAA 201
Query: 209 LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG-FGGP 267
LVPKGEL+GEMGDAHMAMQARLMSQALRKLSHSLSLSQT+LIFINQVR+KLSTFG FGGP
Sbjct: 202 LVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGP 261
Query: 268 TEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQIAVKIVKNKLAPPFKTAQFELEFG 327
TEVTCGGNALKFYAS+RLNIKRIGL+KKGEET GSQ++VKIVKNKLAPPF+TAQFELEFG
Sbjct: 262 TEVTCGGNALKFYASMRLNIKRIGLIKKGEETTGSQVSVKIVKNKLAPPFRTAQFELEFG 321
Query: 328 KGISRESEIIDLALKHKFASKAGAMFTYNDRNFRGKEAFKQFLVENESVREELVIKLREK 387
KGI + +EIIDL++KHKF +K G + N +N+ GKEA K+FL +NES +EEL+ KL++K
Sbjct: 322 KGICKITEIIDLSIKHKFIAKNGTFYNLNGKNYHGKEALKRFLKQNESDQEELMKKLQDK 381
Query: 388 LVVDHKEPQTAXXXXXXXXXXXXXISPDSTDEEAAAVV 425
L+ D + +SPD+TD+E+ A+V
Sbjct: 382 LIADEAADKETESESEEEDSLRVVVSPDNTDDESPALV 419
>TIGR_CMR|CBU_1054 [details] [associations]
symbol:CBU_1054 "recA protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354
RefSeq:NP_820055.1 ProteinModelPortal:Q83CQ4 SMR:Q83CQ4
PRIDE:Q83CQ4 GeneID:1208955 KEGG:cbu:CBU_1054 PATRIC:17930833
OMA:MLIFINQ BioCyc:CBUR227377:GJ7S-1046-MONOMER Uniprot:Q83CQ4
Length = 343
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 184/334 (55%), Positives = 239/334 (71%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M + AL AL QI FGKGS+M LG + V+STGS LDIALG GGLP+GR+
Sbjct: 1 MDNRSNALNAALSQIERQFGKGSVMRLGDPGLIPDIDVISTGSLGLDIALGVGGLPRGRI 60
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+EIYGPEASGKTTLAL IA QR GG F+DAEHALD A +GVK E+LL++QPD
Sbjct: 61 IEIYGPEASGKTTLALQTIASCQRMGGTAAFVDAEHALDAIYAGKLGVKVEDLLVSQPDT 120
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + D L+RSG L PK E++G+MGD+HM +QARLMSQALRKL+ +
Sbjct: 121 GEQALEITDMLVRSGAVDLIVIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTAN 180
Query: 242 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 301
+ S T++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +KKGEE +G
Sbjct: 181 IKKSNTLVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYSSVRLDIRRIGAIKKGEEILG 238
Query: 302 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNF 360
S+ VK+VKNK+APPF+ +F++ +G GISRESE+IDL +K++ KAGA ++YN +R
Sbjct: 239 SETRVKVVKNKVAPPFRQVEFDILYGLGISRESELIDLGVKNELVEKAGAWYSYNGERIG 298
Query: 361 RGKEAFKQFLVENESVREELVIKLREKLVVDHKE 394
+GKE +QF +EN + E+ +LREKL+ H++
Sbjct: 299 QGKENVRQFFLENPKIAGEIETRLREKLL-PHRQ 331
>TIGR_CMR|CHY_1166 [details] [associations]
symbol:CHY_1166 "recA protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684 GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:TRKGAWY RefSeq:YP_360011.1
ProteinModelPortal:Q3ACX3 SMR:Q3ACX3 STRING:Q3ACX3 GeneID:3727219
KEGG:chy:CHY_1166 PATRIC:21275472
BioCyc:CHYD246194:GJCN-1165-MONOMER Uniprot:Q3ACX3
Length = 343
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 173/329 (52%), Positives = 241/329 (73%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M+ K AL+ + QI FGKGSIM LG + V V+ TGS ALD+ALG GG+P+GRV
Sbjct: 1 MNDKLKALELTISQIEKQFGKGSIMRLGENTGKFQVEVIPTGSLALDLALGVGGVPRGRV 60
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
VEI+GPE+SGKTT+ALH+IAEAQ+ GG FIDAEHALDP A+ +GV ENLL++QPD
Sbjct: 61 VEIFGPESSGKTTVALHIIAEAQKMGGIAAFIDAEHALDPVYAQKLGVDIENLLVSQPDT 120
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + ++L+RSG LVP+ E++GEMGDAH+ +QARLMSQALRKL+ +
Sbjct: 121 GEQALEIAESLVRSGAIDVIVIDSVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGA 180
Query: 242 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 301
+S S+T+ IFINQ+R K+ FG P E T GG ALKFYAS+R+++++I ++K+G + IG
Sbjct: 181 ISKSKTVAIFINQMREKVGVM-FGNP-ETTPGGRALKFYASIRMDVRKIDVIKQGNDIIG 238
Query: 302 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 360
S+ VKIVKNK+APPFK A F++ +G+GIS+E ++D+A++ K K G+ ++YND
Sbjct: 239 SRTRVKIVKNKVAPPFKQADFDIMYGEGISKEGSLLDVAVELKIVQKVGSWYSYNDERLG 298
Query: 361 RGKEAFKQFLVENESVREELVIKLREKLV 389
+G+E K+FL +N + E+ K+RE+++
Sbjct: 299 QGRENAKEFLRQNPEIYREIEQKIREQVL 327
>TIGR_CMR|BA_3915 [details] [associations]
symbol:BA_3915 "recA protein, group I intron-containing"
species:198094 "Bacillus anthracis str. Ames" [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AF229167 RefSeq:NP_846162.1
RefSeq:YP_029881.1 ProteinModelPortal:Q9APZ2 SMR:Q9APZ2
IntAct:Q9APZ2 EnsemblBacteria:EBBACT00000011833
EnsemblBacteria:EBBACT00000023909 EnsemblBacteria:EBBACT00000082851
GeneID:1087627 GeneID:2850041 KEGG:ban:BA_3915 KEGG:bat:BAS3629
PATRIC:18785420 ProtClustDB:PRK09354 Uniprot:Q9APZ2
Length = 343
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 172/326 (52%), Positives = 231/326 (70%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
MS + AL AL QI FGKGSIM LG R V VS+GS ALD+ALG GG P+GR+
Sbjct: 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEQAE-RKVSTVSSGSLALDVALGVGGYPRGRI 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+EIYGPE+SGKTT++LH IAE QRQGG FIDAEHA+DP A+ +GV + LLL+QPD
Sbjct: 60 IEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQ L + + L+RSG LVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 301
++ S+TI IFINQ+R K+ FG P E T GG ALKFY++VRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVG 237
Query: 302 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 360
++ VK+VKNK+APPF+ A+ ++ +G+GISRE EI+D+A + K+GA ++YN+
Sbjct: 238 NKTKVKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLG 297
Query: 361 RGKEAFKQFLVENESVREELVIKLRE 386
+G+E KQFL EN +REE+ +RE
Sbjct: 298 QGRENSKQFLKENTDLREEIAFFIRE 323
>TIGR_CMR|NSE_0530 [details] [associations]
symbol:NSE_0530 "recA protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_506414.1 ProteinModelPortal:Q2GDN2 SMR:Q2GDN2
STRING:Q2GDN2 GeneID:3931948 KEGG:nse:NSE_0530 PATRIC:22681109
BioCyc:NSEN222891:GHFU-550-MONOMER Uniprot:Q2GDN2
Length = 327
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 172/330 (52%), Positives = 238/330 (72%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
M+++D AL+ + QI FGKGSIM + P V +STGS LD ALG GG+PKGR+
Sbjct: 1 MNRED-ALKGVVVQIEKMFGKGSIMTFSQE--PASVECISTGSIGLDSALG-GGIPKGRI 56
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+EI+GPE+SGKTTL LH+IAEAQ+ GG C FIDAEHALDP A +GVK E LL++QPD
Sbjct: 57 IEIFGPESSGKTTLTLHIIAEAQKNGGTCAFIDAEHALDPVYARRLGVKIEELLISQPDT 116
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL +VD+LI+SG L PK E++GEMGD H+ +QARL+SQALRK++ S
Sbjct: 117 GEQALEIVDSLIKSGAVDVIVVDSVAALTPKAEIEGEMGDLHVGLQARLLSQALRKITAS 176
Query: 242 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 301
+S S +++FINQ+R K+ FG P E T GGNALKFY+SVR++I++IG +K E+ +G
Sbjct: 177 VSRSNCVVVFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRIDIRKIGSIKDKEDVVG 234
Query: 302 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 360
+Q VK+VKNK+APPFK A+F++ + +GIS+ EII++ +++K KAG+ ++Y D
Sbjct: 235 NQTRVKVVKNKVAPPFKQAEFDIIYTEGISKLGEIIEIGVRNKIIEKAGSYYSYGDVKLG 294
Query: 361 RGKEAFKQFLVENESVREELVIKLREKLVV 390
+GKE KQFL EN+ + EL K+R+ +++
Sbjct: 295 QGKENVKQFLKENKELAAELERKVRDSMLL 324
>TIGR_CMR|SO_3430 [details] [associations]
symbol:SO_3430 "recA protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
RefSeq:NP_718983.1 ProteinModelPortal:Q8EBS0 GeneID:1171105
KEGG:son:SO_3430 PATRIC:23526548 Uniprot:Q8EBS0
Length = 357
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 173/326 (53%), Positives = 228/326 (69%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K+ AL L QI FGKGSIM LG + V +STGS +LD+ALG GGLP GR+VEI
Sbjct: 7 KEKALAAVLSQIEKQFGKGSIMKLGEDRS-MDVETISTGSLSLDVALGAGGLPMGRIVEI 65
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A+ +GV +NLL +QPD GEQ
Sbjct: 66 YGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + D L RSG L PK E++GE+GD+HM + AR+MSQA+RKL+ +L
Sbjct: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
Query: 245 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 304
S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+G+E +G++
Sbjct: 186 SNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNET 243
Query: 305 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRGK 363
VK+VKNK+A PFK A+F++ +G+GI+R E++DL + HK KAGA ++Y D+ +G+
Sbjct: 244 RVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGR 303
Query: 364 EAFKQFLVENESVREELVIKLREKLV 389
++L EN ++ E+ LRE L+
Sbjct: 304 ANAGKYLTENPAIAAEIDKTLRELLL 329
>UNIPROTKB|P45383 [details] [associations]
symbol:recA "Protein RecA" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=IMP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 176/332 (53%), Positives = 230/332 (69%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+EN K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP
Sbjct: 2 DENKQK---ALAAALGQIEKQFGKGSIMRLGDN-RAMDVETISTGSLSLDIALGAGGLPM 57
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEI+GPE+SGKTTL L +IA AQR+G C FIDAEHALDP A+ +GV + LL++Q
Sbjct: 58 GRIVEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQ 117
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L RSG L PK E++GEMGD+HM +QAR++SQA+RKL
Sbjct: 118 PDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKL 177
Query: 239 SHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 298
+ +L S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE
Sbjct: 178 TGNLKQSNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGEE 235
Query: 299 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-D 357
+G++ +K+VKNK+A PFK A ++ +G+G +RE E+IDL +KHK K+GA ++YN D
Sbjct: 236 VVGNETRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGD 295
Query: 358 RNFRGKEAFKQFLVENESVREELVIKLREKLV 389
+ +GK ++L EN + + L KLRE L+
Sbjct: 296 KIGQGKANACKYLKENPEIAKTLDKKLREMLL 327
>TIGR_CMR|VC_0543 [details] [associations]
symbol:VC_0543 "recA protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 176/332 (53%), Positives = 230/332 (69%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+EN K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP
Sbjct: 2 DENKQK---ALAAALGQIEKQFGKGSIMRLGDN-RAMDVETISTGSLSLDIALGAGGLPM 57
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEI+GPE+SGKTTL L +IA AQR+G C FIDAEHALDP A+ +GV + LL++Q
Sbjct: 58 GRIVEIFGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQ 117
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L RSG L PK E++GEMGD+HM +QAR++SQA+RKL
Sbjct: 118 PDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKL 177
Query: 239 SHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 298
+ +L S + IFINQ+R K+ FG P E T GGNALKFYASVRL+I+R G +K+GEE
Sbjct: 178 TGNLKQSNCMCIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRTGAIKEGEE 235
Query: 299 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-D 357
+G++ +K+VKNK+A PFK A ++ +G+G +RE E+IDL +KHK K+GA ++YN D
Sbjct: 236 VVGNETRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGD 295
Query: 358 RNFRGKEAFKQFLVENESVREELVIKLREKLV 389
+ +GK ++L EN + + L KLRE L+
Sbjct: 296 KIGQGKANACKYLKENPEIAKTLDKKLREMLL 327
>UNIPROTKB|P0A5U4 [details] [associations]
symbol:recA "Protein RecA" species:1773 "Mycobacterium
tuberculosis" [GO:0000150 "recombinase activity" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0000725
"recombinational repair" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0004520 "endodeoxyribonuclease
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI;IEP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0009650 "UV protection" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0030145 "manganese
ion binding" evidence=IDA] [GO:0042148 "strand invasion"
evidence=IDA] [GO:0046677 "response to antibiotic" evidence=IEP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR004042
InterPro:IPR006141 InterPro:IPR006142 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PRINTS:PR00379 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 PROSITE:PS50817 PROSITE:PS50818
PROSITE:PS50819 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0000287 GO:GO:0046677 GO:GO:0030145
GO:GO:0003697 GO:GO:0006314 GO:GO:0004520 GO:GO:0009650
GO:GO:0008094 GO:GO:0009432 GO:GO:0000725 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
GO:GO:0000150 TIGRFAMs:TIGR01443 TIGRFAMs:TIGR01445 GO:GO:0042148
KO:K03553 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
EMBL:X58485 EMBL:AJ000012 EMBL:AJ000011 PIR:S18206
RefSeq:NP_217253.1 RefSeq:NP_337313.1 RefSeq:YP_006516181.1
PDB:1G18 PDB:1G19 PDB:1MO3 PDB:1MO4 PDB:1MO5 PDB:1MO6 PDB:2IMZ
PDB:2IN0 PDB:2IN8 PDB:2IN9 PDB:2L8L PDB:3IFJ PDB:3IGD PDBsum:1G18
PDBsum:1G19 PDBsum:1MO3 PDBsum:1MO4 PDBsum:1MO5 PDBsum:1MO6
PDBsum:2IMZ PDBsum:2IN0 PDBsum:2IN8 PDBsum:2IN9 PDBsum:2L8L
PDBsum:3IFJ PDBsum:3IGD ProteinModelPortal:P0A5U4 SMR:P0A5U4
MEROPS:N10.009 PRIDE:P0A5U4 EnsemblBacteria:EBMYCT00000000048
EnsemblBacteria:EBMYCT00000072309 GeneID:13319464 GeneID:888371
GeneID:925483 KEGG:mtc:MT2806 KEGG:mtu:Rv2737c KEGG:mtv:RVBD_2737c
PATRIC:18127918 TubercuList:Rv2737c eggNOG:COG1372
ProtClustDB:PRK09519 BindingDB:P0A5U4 ChEMBL:CHEMBL1741171
EvolutionaryTrace:P0A5U4 Uniprot:P0A5U4
Length = 790
Score = 690 (248.0 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 137/248 (55%), Positives = 180/248 (72%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
++ AL+ A+ QI S+GKGS+M LG + + V+ TGS ALD+ALG GGLP+GRV+EI
Sbjct: 7 REKALELAVAQIEKSYGKGSVMRLGDEAR-QPISVIPTGSIALDVALGIGGLPRGRVIEI 65
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTT+ALH +A AQ GG FIDAEHALDP A+ +GV T++LL++QPD GEQ
Sbjct: 66 YGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQ 125
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + D LIRSG LVP+ EL+GEMGD+H+ +QARLMSQALRK++ +L+
Sbjct: 126 ALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNN 185
Query: 245 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 304
S T IFINQ+R K+ FG P E T GG ALKFYASVR++++R+ +K G +G++
Sbjct: 186 SGTTAIFINQLRDKIGVM-FGSP-ETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRT 243
Query: 305 AVKIVKNK 312
VK+VKNK
Sbjct: 244 RVKVVKNK 251
Score = 189 (71.6 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
Identities = 38/92 (41%), Positives = 58/92 (63%)
Query: 298 ETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND 357
E + + +A +V + +PPFK A+F++ +GKGISRE +ID+ + K+GA FTY
Sbjct: 677 EELHTLVAEGVVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEG 736
Query: 358 RNF-RGKEAFKQFLVENESVREELVIKLREKL 388
+GKE + FLVEN V +E+ K++EKL
Sbjct: 737 EQLGQGKENARNFLVENADVADEIEKKIKEKL 768
>TIGR_CMR|GSU_0145 [details] [associations]
symbol:GSU_0145 "recA protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:NP_951207.1 ProteinModelPortal:P62215 SMR:P62215
GeneID:2688015 KEGG:gsu:GSU0145 PATRIC:22023038
BioCyc:GSUL243231:GH27-171-MONOMER Uniprot:P62215
Length = 338
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 172/326 (52%), Positives = 233/326 (71%)
Query: 64 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 123
+++ A++ AL QI FGKG+IM LG V + TGS +LD+ALG GG+P+GR++E
Sbjct: 4 EREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIE 63
Query: 124 IYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGE 183
IYGPE+SGKTTLALH+ AEAQ+ GG F+DAEHALD A +GVKT++LL++QPD GE
Sbjct: 64 IYGPESSGKTTLALHIAAEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGE 123
Query: 184 QALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLS 243
QAL + + L+RSG LVPK E++GEMGD+HM +QARLMSQALRKL+ +S
Sbjct: 124 QALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRKLTGIIS 183
Query: 244 LSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQ 303
S +IFINQ+R K+ FG P E T GGNALKFYASVRL+I++I +K+G++ IGS+
Sbjct: 184 KSNCCVIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRKIASLKQGQDVIGSR 241
Query: 304 IAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYN-DRNFRG 362
VK+VKNK+APPFK +F++ +G+GISRE +I+DLA++ K+GA F+Y DR +G
Sbjct: 242 TKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQG 301
Query: 363 KEAFKQFLVENESVREELVIKLREKL 388
+E + FL E R ELV ++ K+
Sbjct: 302 RENSRLFLKE----RPELVNEIEGKV 323
>UNIPROTKB|P0A7G6 [details] [associations]
symbol:recA species:83333 "Escherichia coli K-12"
[GO:0003697 "single-stranded DNA binding" evidence=IEA;IDA]
[GO:0048870 "cell motility" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0009432 "SOS response"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0006974 GO:GO:0006310
GO:GO:0003697 GO:GO:0048870 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:V00328 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:G65049 RefSeq:NP_417179.1 RefSeq:YP_490908.1 PDB:1AA3 PDB:1N03
PDB:1REA PDB:1U94 PDB:1U98 PDB:1U99 PDB:1XMS PDB:1XMV PDB:2REB
PDB:2REC PDB:3CMT PDB:3CMU PDB:3CMV PDB:3CMW PDB:3CMX PDBsum:1AA3
PDBsum:1N03 PDBsum:1REA PDBsum:1U94 PDBsum:1U98 PDBsum:1U99
PDBsum:1XMS PDBsum:1XMV PDBsum:2REB PDBsum:2REC PDBsum:3CMT
PDBsum:3CMU PDBsum:3CMV PDBsum:3CMW PDBsum:3CMX
ProteinModelPortal:P0A7G6 SMR:P0A7G6 DIP:DIP-31832N IntAct:P0A7G6
MINT:MINT-1300726 SWISS-2DPAGE:P0A7G6 PaxDb:P0A7G6 PRIDE:P0A7G6
EnsemblBacteria:EBESCT00000004487 EnsemblBacteria:EBESCT00000004488
EnsemblBacteria:EBESCT00000017937 GeneID:12930224 GeneID:947170
KEGG:ecj:Y75_p2637 KEGG:eco:b2699 PATRIC:32120796 EchoBASE:EB0816
EcoGene:EG10823 BioCyc:EcoCyc:EG10823-MONOMER
BioCyc:ECOL316407:JW2669-MONOMER ChEMBL:CHEMBL3434
EvolutionaryTrace:P0A7G6 Genevestigator:P0A7G6 Uniprot:P0A7G6
Length = 353
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 178/332 (53%), Positives = 226/332 (68%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+EN K AL AL QI FGKGSIM LG + V +STGS +LDIALG GGLP
Sbjct: 4 DENKQK---ALAAALGQIEKQFGKGSIMRLGEDRS-MDVETISTGSLSLDIALGAGGLPM 59
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEIYGPE+SGKTTL L VIA AQR+G C FIDAEHALDP A +GV +NLL +Q
Sbjct: 60 GRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQ 119
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL + D L RSG L PK E++GE+GD+HM + AR+MSQA+RKL
Sbjct: 120 PDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKL 179
Query: 239 SHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 298
+ +L S T+LIFINQ+R K+ FG P E T GGNALKFYASVRL+I+RIG VK+GE
Sbjct: 180 AGNLKQSNTLLIFINQIRMKIGVM-FGNP-ETTTGGNALKFYASVRLDIRRIGAVKEGEN 237
Query: 299 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDR 358
+GS+ VK+VKNK+A PFK A+F++ +G+GI+ E++DL +K K KAGA ++Y
Sbjct: 238 VVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGE 297
Query: 359 NF-RGKEAFKQFLVENESVREELVIKLREKLV 389
+GK +L +N +E+ K+RE L+
Sbjct: 298 KIGQGKANATAWLKDNPETAKEIEKKVRELLL 329
>TIGR_CMR|SPO_2034 [details] [associations]
symbol:SPO_2034 "recA protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003677 "DNA binding" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 OMA:KAFFREH Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_167265.1
ProteinModelPortal:Q5LRU0 SMR:Q5LRU0 PRIDE:Q5LRU0 GeneID:3193665
KEGG:sil:SPO2034 PATRIC:23377403 Uniprot:Q5LRU0
Length = 347
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 170/322 (52%), Positives = 223/322 (69%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K AL AL QI FGKGSIM LG + + STGS LDIALG GGLP GR+VEI
Sbjct: 9 KQKALDSALAQIERQFGKGSIMRLGGENAIQEIEASSTGSLGLDIALGIGGLPMGRIVEI 68
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTL LH IAE Q++GG C F+DAEHALDP A +GV + LL++QPD GEQ
Sbjct: 69 YGPESSGKTTLTLHCIAEQQKRGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGEQ 128
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL + DTL+RSG L PK EL+G+MGD+ + + ARLMSQA+RKL+ S+S
Sbjct: 129 ALEITDTLVRSGAVNMVVVDSVAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISR 188
Query: 245 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 304
S+ ++IFINQ+R K+ FG P E T GGNALKFY+SVRL+I+RIG +K +E +G+
Sbjct: 189 SKCMVIFINQIRMKIGVM-FGSP-ETTTGGNALKFYSSVRLDIRRIGAIKDRDEVVGNAT 246
Query: 305 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 363
VK+VKNK+APPFK +F++ +G+GIS+ E++DL +K K+G+ F+Y D +G+
Sbjct: 247 RVKVVKNKVAPPFKQVEFDIMYGEGISKTGELLDLGVKAGVVDKSGSWFSYGDERIGQGR 306
Query: 364 EAFKQFLVENESVREELVIKLR 385
E K FL EN+S+ + K+R
Sbjct: 307 ENAKTFLRENQSIALAIEDKIR 328
>UNIPROTKB|P16971 [details] [associations]
symbol:recA "Protein RecA" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 EMBL:AL009126
GenomeReviews:AL009126_GR GO:GO:0009295 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 EMBL:X52132 EMBL:U87792
EMBL:U56238 PIR:S10370 RefSeq:NP_389576.2 ProteinModelPortal:P16971
SMR:P16971 IntAct:P16971 EnsemblBacteria:EBBACT00000002648
GeneID:939497 KEGG:bsu:BSU16940 PATRIC:18975195 GenoList:BSU16940
BioCyc:BSUB:BSU16940-MONOMER Uniprot:P16971
Length = 348
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 169/332 (50%), Positives = 231/332 (69%)
Query: 62 MSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRV 121
MS + AL AL QI FGKGSIM LG R + V +GS ALD ALG GG P+GR+
Sbjct: 1 MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTR-ISTVPSGSLALDTALGIGGYPRGRI 59
Query: 122 VEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDC 181
+E+YGPE+SGKTT+ALH IAE Q+QGG FIDAEHALDP A+ +GV E LLL+QPD
Sbjct: 60 IEVYGPESSGKTTVALHAIAEVQQQGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDT 119
Query: 182 GEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHS 241
GEQAL + + L+RSG LVPK E++G+MGD+H+ +QARLMSQALRKLS +
Sbjct: 120 GEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGA 179
Query: 242 LSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIG 301
++ S+TI IFINQ+R K+ FG P E T GG ALKFY+SVRL ++R +K+G + +G
Sbjct: 180 INKSKTIAIFINQIREKVGVM-FGNP-ETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMG 237
Query: 302 SQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF- 360
++ +K+VKNK+APPF+TA+ ++ +G+GIS+E EIIDL + K+G+ ++Y +
Sbjct: 238 NKTKIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLG 297
Query: 361 RGKEAFKQFLVENESVREELVIKLREKLVVDH 392
+G+E KQFL EN+ + + ++RE +D+
Sbjct: 298 QGRENAKQFLKENKDIMLMIQEQIREHYGLDN 329
>DICTYBASE|DDB_G0276073 [details] [associations]
symbol:recA "recombinase A" species:44689
"Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA;IGI] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009432 "SOS response" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
dictyBase:DDB_G0276073 GO:GO:0005739 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000014 GenomeReviews:CM000151_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:BR000215 RefSeq:XP_643316.1
HSSP:P0A7G6 ProteinModelPortal:Q75JL2 SMR:Q75JL2 STRING:Q75JL2
EnsemblProtists:DDB0231571 GeneID:8620362 KEGG:ddi:DDB_G0276073
OMA:IRRTEWI Uniprot:Q75JL2
Length = 452
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 170/329 (51%), Positives = 233/329 (70%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
S +++ L ++ SFGKG++M LG + + V V+ +GS LDIALG GGLPKGRV
Sbjct: 84 SASSSSMENVLKELEKSFGKGTLMKLGSQFSTQKVEVIPSGSMGLDIALGVGGLPKGRVT 143
Query: 123 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 182
EI+GPE+SGKTTLALHVIA+AQ+ GG C FIDAEHAL+P A +GV + L ++QPD G
Sbjct: 144 EIFGPESSGKTTLALHVIAQAQKAGGNCTFIDAEHALNPQWAARLGVNLDELFVSQPDNG 203
Query: 183 EQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 242
EQAL +VD+L+RS LVP+ E++GEMGD+H+ +QARLMSQALRKLS +L
Sbjct: 204 EQALEIVDSLLRSKTMSVIVVDSVAALVPRVEIEGEMGDSHLGVQARLMSQALRKLSPTL 263
Query: 243 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 302
S +LIFINQ+R K+ FG P EVT GGNALKF++S+R++I+++G VKKG++ I S
Sbjct: 264 KDSNCVLIFINQIRMKIGVM-FGNP-EVTSGGNALKFFSSIRIDIRKVGTVKKGDDIIAS 321
Query: 303 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-R 361
Q+ K+VKNKLAPPFK A F+++F GI++ EIIDLA+ K G+ ++YND +
Sbjct: 322 QVKAKVVKNKLAPPFKEAIFDIDFQSGINKTGEIIDLAVAEGIIDKMGSWYSYNDIKLDQ 381
Query: 362 GKEAFKQFLVENE-SVREELVIKLREKLV 389
G+E K L + + ++ E+ KLR+KL+
Sbjct: 382 GREKTKYLLEKTQPNLLVEIENKLRDKLI 410
>TIGR_CMR|CJE_1845 [details] [associations]
symbol:CJE_1845 "recA protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_179815.1
ProteinModelPortal:Q5HSC0 SMR:Q5HSC0 STRING:Q5HSC0 GeneID:3232472
KEGG:cjr:CJE1845 PATRIC:20045522 OMA:TRKGAWY
BioCyc:CJEJ195099:GJC0-1884-MONOMER Uniprot:Q5HSC0
Length = 343
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 161/328 (49%), Positives = 229/328 (69%)
Query: 65 KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEI 124
K +L AL + +FGKG+I+ LG + + + TGS LD+ALG GG+PKGR++EI
Sbjct: 5 KRKSLDAALKSLDKTFGKGTILRLGDKEVEQ-IDSIGTGSVGLDLALGIGGVPKGRIIEI 63
Query: 125 YGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQ 184
YGPE+SGKTTL LH+IAE Q+ GG C FIDAEHALD A+ +GV T++L ++QPD GEQ
Sbjct: 64 YGPESSGKTTLTLHIIAECQKAGGVCAFIDAEHALDVKYAKNLGVNTDDLYVSQPDFGEQ 123
Query: 185 ALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSL 244
AL +V+T+ RSG L PK E++G+MGD H+ +QARLMSQALRKL+ +
Sbjct: 124 ALEIVETIARSGAVDLIVVDSVAALTPKAEIEGDMGDQHVGLQARLMSQALRKLTGIVHK 183
Query: 245 SQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQI 304
T +IFINQ+R K+ G+G P E T GGNALKFYASVRL+++++ +K+ EE IG+++
Sbjct: 184 MNTTVIFINQIRMKIGAMGYGTP-ETTTGGNALKFYASVRLDVRKVATLKQNEEPIGNRV 242
Query: 305 AVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGK 363
VK+VKNK+APPF+ A+F++ FG+G+SRE E+ID +K K+GA F+Y D+ +G+
Sbjct: 243 KVKVVKNKVAPPFRQAEFDVMFGEGLSREGELIDYGVKLDIVDKSGAWFSYKDKKLGQGR 302
Query: 364 EAFKQFLVENESVREELVIKLREKLVVD 391
E K FL EN + +E+ ++ + ++
Sbjct: 303 ENSKAFLKENPEIADEITKAIQNSMGIE 330
>TIGR_CMR|DET_1606 [details] [associations]
symbol:DET_1606 "recA protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_182301.1 ProteinModelPortal:Q3Z648 SMR:Q3Z648
STRING:Q3Z648 GeneID:3229079 KEGG:det:DET1606 PATRIC:21610224
BioCyc:DETH243164:GJNF-1607-MONOMER Uniprot:Q3Z648
Length = 337
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 161/328 (49%), Positives = 223/328 (67%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
++KD AL+ + I FGKGSIM L + V + T S ALDIALG GG+P+GR+
Sbjct: 3 TEKDKALELTVGIIEKRFGKGSIMKLSDPTFRQTVEFIPTSSLALDIALGVGGIPRGRIS 62
Query: 123 EIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCG 182
EI+GPE SGKTTLA H+IA+AQ+ G +ID EHALDP A T GV + LL++QPD G
Sbjct: 63 EIFGPEGSGKTTLAQHIIAQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTG 122
Query: 183 EQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSL 242
E+AL + + L+RS LVPK E++G+MGD+H+ +QARLMSQALRKL+ S+
Sbjct: 123 EEALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTASI 182
Query: 243 SLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGS 302
++T +IFINQ+R K+ FG P EVT GG ALKFY+SVR++++RI +K+G IG+
Sbjct: 183 GQTRTAVIFINQLREKVGVM-FGNP-EVTPGGRALKFYSSVRIDLRRIETIKQGTVAIGT 240
Query: 303 QIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND-RNFR 361
++ K+VKNK+APPF+TA+F++ F GISRE +IDL + + KAGA F+Y D R +
Sbjct: 241 RVRAKVVKNKVAPPFRTAEFDIMFDSGISREGNLIDLGVTSEVIRKAGAFFSYGDIRLGQ 300
Query: 362 GKEAFKQFLVENESVREELVIKLREKLV 389
G+E+ K +L N + +E+ K+R V
Sbjct: 301 GRESAKNYLAANPDLAQEIEEKIRASAV 328
>TIGR_CMR|ECH_1109 [details] [associations]
symbol:ECH_1109 "recA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_507893.1 ProteinModelPortal:Q2GF90 SMR:Q2GF90
STRING:Q2GF90 GeneID:3927794 KEGG:ech:ECH_1109 PATRIC:20577554
BioCyc:ECHA205920:GJNR-1112-MONOMER Uniprot:Q2GF90
Length = 357
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 163/336 (48%), Positives = 229/336 (68%)
Query: 60 ENMSK-KDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+N+++ + AL A+ QI +FG+G+IM L + + + +STGS ALD ALG GG PK
Sbjct: 5 KNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEK-IDSISTGSIALDTALGIGGFPK 63
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VEI+GPE+SGKTTLALHVIAE+Q++GG C FIDAEHALD A +GV T +L+++Q
Sbjct: 64 GRIVEIFGPESSGKTTLALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLIVSQ 123
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL +V+ L+ SG L P+ E++G+MGD HM +QARL+S ALRKL
Sbjct: 124 PDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKL 183
Query: 239 SHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 298
+ +S + +LIFINQ+R K+ +G P E T GGNALKFY+SVRL+I+++ +K +
Sbjct: 184 TSIVSKANCVLIFINQIRMKIGVV-YGNP-ETTTGGNALKFYSSVRLDIRKVSAIKDKDV 241
Query: 299 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND- 357
IG+Q VK+VKNK+APPFK F++ + +GIS+ EIID+ +K KAG+ ++YN
Sbjct: 242 IIGNQTKVKVVKNKVAPPFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNSV 301
Query: 358 RNFRGKEAFKQFLVENESVREELVIKLREKLVVDHK 393
R +GKE K +L N E+ K+R L D++
Sbjct: 302 RLGQGKENAKSYLKANCDTAHEIEQKIRSILASDNE 337
>TIGR_CMR|APH_1354 [details] [associations]
symbol:APH_1354 "recA protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:IRRTEWI ProtClustDB:PRK09354
RefSeq:YP_505854.1 ProteinModelPortal:Q2GIE7 SMR:Q2GIE7
STRING:Q2GIE7 GeneID:3931040 KEGG:aph:APH_1354 PATRIC:20951508
BioCyc:APHA212042:GHPM-1354-MONOMER Uniprot:Q2GIE7
Length = 354
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 157/332 (47%), Positives = 224/332 (67%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+++ S K A+ A+ QI +FG+GSIM L S V VSTGS ALD ALG GGLP+
Sbjct: 2 KDSPSDKQRAVDAAIGQIERAFGRGSIMRLQNSPVEA-VECVSTGSIALDAALGVGGLPR 60
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR++EI+GPE+SGKTTLALHVIAEAQ+ GG C FIDAEHALD A +GV +L+++Q
Sbjct: 61 GRIIEIFGPESSGKTTLALHVIAEAQKNGGACAFIDAEHALDTLYARKLGVSVGDLIVSQ 120
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
PD GEQAL +V+ L+ SG L P+ E++G+MGD HM +QARL+S ALRKL
Sbjct: 121 PDTGEQALHIVEHLVNSGAVDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKL 180
Query: 239 SHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 298
+ +S + +L+FINQ+R K+ +G P EVT GG+ALKFY S+RL+I+++ +K+ E
Sbjct: 181 TSIVSKANCLLVFINQIRMKIGVV-YGNP-EVTTGGSALKFYTSIRLDIRKVSALKEKEN 238
Query: 299 TIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDR 358
G VK+VKNK+APPFK A+F++ + +GIS+ EI+D+ ++ F KAG+ +++
Sbjct: 239 VTGHLARVKVVKNKVAPPFKQAEFDIMYSEGISKVGEILDMGVRFGFIEKAGSYYSHEGI 298
Query: 359 NF-RGKEAFKQFLVENESVREELVIKLREKLV 389
+G+E + +L N + +L +R KL+
Sbjct: 299 KLGQGRETARSYLKNNADLSHKLEGLIRAKLL 330
>TAIR|locus:2100038 [details] [associations]
symbol:RECA3 "RECA homolog 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;ISS] [GO:0009432 "SOS response" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI]
[GO:0009408 "response to heat" evidence=IGI] InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006281 GO:GO:0009408
GO:GO:0006310 GO:GO:0003697 GO:GO:0000002 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 EMBL:AC010927 UniGene:At.39982
UniGene:At.48640 HOGENOM:HOG000264120 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AY072877 EMBL:AY136400 EMBL:BT000214
IPI:IPI00542438 RefSeq:NP_187625.2 ProteinModelPortal:Q8RY99
SMR:Q8RY99 IntAct:Q8RY99 PRIDE:Q8RY99 EnsemblPlants:AT3G10140.1
GeneID:820177 KEGG:ath:AT3G10140 GeneFarm:2673 TAIR:At3g10140
InParanoid:Q8RY99 OMA:CRSETLI PhylomeDB:Q8RY99
ProtClustDB:CLSN2722126 Genevestigator:Q8RY99 GermOnline:AT3G10140
Uniprot:Q8RY99
Length = 389
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 151/331 (45%), Positives = 218/331 (65%)
Query: 59 EENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPK 118
+ +++KD AL AL Q++ F K S + L R R V V+STGS LD+ALG GGLPK
Sbjct: 56 DRKVAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPK 115
Query: 119 GRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQ 178
GR+VE+YG EASGKTTLALH+I EAQ+ GGYC ++DAE+A+DPSLAE+IGV TE LL+++
Sbjct: 116 GRMVEVYGKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISR 175
Query: 179 PDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKL 238
P E+ L++VD L +SG L P+ ELD +G+ + Q+R+M+QALRK+
Sbjct: 176 PSSAEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKI 235
Query: 239 SHSLSLSQTILIFINQVRAKL-STFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGE 297
+S+ SQT+++F+NQVR+ + S F EVTCGGNAL F+A++RL + R GL+K
Sbjct: 236 HYSVGYSQTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTAN 295
Query: 298 ETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYND 357
+ G + V++VKNKLAP K ++ + FG G E E+++LA +H + G +
Sbjct: 296 KISGLNVCVQVVKNKLAPGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSYFIEG 355
Query: 358 RNFRGKEAFKQFLVENESVREELVIKLREKL 388
GK+A +++LVEN+ + +V LR +L
Sbjct: 356 EVIEGKDAAEKYLVENKEALDTVVAILRNQL 386
>TAIR|locus:2207445 [details] [associations]
symbol:RECA1 "homolog of bacterial RecA" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 EMBL:CP002684 GO:GO:0005524
GO:GO:0009570 GO:GO:0006281 GO:GO:0006974 UniGene:At.23809
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:AC002986 UniGene:At.317 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:L15229 EMBL:AY050885
EMBL:AY113960 EMBL:M98039 IPI:IPI00533410 PIR:A46259 PIR:T01050
RefSeq:NP_565198.1 ProteinModelPortal:Q39199 SMR:Q39199
STRING:Q39199 PaxDb:Q39199 PRIDE:Q39199 EnsemblPlants:AT1G79050.1
GeneID:844246 KEGG:ath:AT1G79050 GeneFarm:2669 TAIR:At1g79050
InParanoid:Q39199 OMA:KIREQVA PhylomeDB:Q39199
Genevestigator:Q39199 GermOnline:AT1G79050 Uniprot:Q39199
Length = 439
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 155/327 (47%), Positives = 218/327 (66%)
Query: 68 ALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGP 127
AL+ A++ I SSFGKGS+ LG S V S+G LD+ALG GGLPKGRVVEIYGP
Sbjct: 86 ALEAAMNDINSSFGKGSVTRLG-SAGGALVETFSSGILTLDLALG-GGLPKGRVVEIYGP 143
Query: 128 EASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALS 187
E+SGKTTLALH IAE Q+ GG + +DAEHA DP+ ++ +GV ENL++ QPD GE AL
Sbjct: 144 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALE 203
Query: 188 LVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 247
D + RSG L P+ E++GE+G M +QARLMSQALRK+S + S +
Sbjct: 204 TADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 263
Query: 248 ILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGLVK--KGEETIGSQIA 305
LIF+NQ+R K+ + +G P EVT GG ALKF+ASVRL I+ G +K KG+E IG +
Sbjct: 264 TLIFLNQIRYKIGVY-YGNP-EVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRAR 321
Query: 306 VKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASKAGAMFTYNDRNF-RGKE 364
V++ K+K++ P+K A+FE+ FG+G+S+ ++D A + K G+ ++Y D+ +G+E
Sbjct: 322 VRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLGQGRE 381
Query: 365 AFKQFLVENESVREELVIKLREKLVVD 391
Q L EN ++++E+ K+R L++D
Sbjct: 382 KALQHLRENPALQDEIEKKVR-LLMLD 407
>TAIR|locus:2103131 [details] [associations]
symbol:AT3G32920 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0009432 "SOS
response" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 KO:K03553 PANTHER:PTHR22942:SF1
EMBL:AP002067 IPI:IPI00528929 RefSeq:NP_189781.4 UniGene:At.53642
ProteinModelPortal:Q3EAS6 SMR:Q3EAS6 GeneID:823055
KEGG:ath:AT3G32920 TAIR:At3g32920 HOGENOM:HOG000034536 OMA:SGRELEW
ArrayExpress:Q3EAS6 Genevestigator:Q3EAS6 GermOnline:AT3G32920
Uniprot:Q3EAS6
Length = 226
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 147/213 (69%), Positives = 166/213 (77%)
Query: 86 MWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQR 145
M+L R+V+PR+VPV STGSFALD+ALG GGLPKGR+VEIYGPEASGKT LALH+++
Sbjct: 1 MYLSRAVSPRNVPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHMLSML-- 58
Query: 146 QGGYCVFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXX 205
L SLA+ IGV TENLLL+QPDCG+QALSLVDTLI+SG
Sbjct: 59 -------------LIRSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDS 105
Query: 206 XXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFGFG 265
LVPKGELDGEMGDAHMA+QARLMSQALRK SHSL LSQT+LIFINQVR + FG
Sbjct: 106 VAALVPKGELDGEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRER-----FG 160
Query: 266 GPTEVTCGGNALKFYASVRLNIKRIGLVKKGEE 298
GPTEVT GGNALKFYA +RL+IKRIGL+KKGEE
Sbjct: 161 GPTEVTSGGNALKFYAPMRLDIKRIGLIKKGEE 193
>UNIPROTKB|P78014 [details] [associations]
symbol:recA "Protein RecA" species:272634 "Mycoplasma
pneumoniae M129" [GO:0005515 "protein binding" evidence=IPI]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 EMBL:U00089
GenomeReviews:U00089_GR GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:S73678 RefSeq:NP_110178.1 ProteinModelPortal:P78014
IntAct:P78014 GeneID:877213 KEGG:mpn:MPN490 PATRIC:20022406
BioCyc:MPNE272634:GJ6Z-531-MONOMER Uniprot:P78014
Length = 336
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 130/305 (42%), Positives = 181/305 (59%)
Query: 97 VPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAE 156
+ VSTGS LD ALGTGGLP GR+VE+YG E+SGKTT+ALH +A Q+ G +IDAE
Sbjct: 37 IKTVSTGSLHLDEALGTGGLPLGRIVELYGNESSGKTTVALHAVASFQKAGKVACYIDAE 96
Query: 157 HALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELD 216
ALD S A+ IG+ LL+A P GE A +L+++LI++ L+PK EL+
Sbjct: 97 GALDLSYAKAIGIDLGKLLVAHPKHGENAFALMESLIKTNKVALIVVDSVAALIPKQELE 156
Query: 217 GEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLST-FGFGGPTEVTCGGN 275
G M D + + AR+MS+ LR++ L S T L+FINQ+R K FG G EVT GG
Sbjct: 157 GNMDDQTIGLHARMMSKGLRRVQSLLPESDTCLLFINQLREKPGVMFGNG---EVTTGGR 213
Query: 276 ALKFYASVRLNIKRIGLVK-KGEETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRES 334
ALKFYAS+R+ KR L+K + +G + + + KNK+A PF A E+ F +GI E
Sbjct: 214 ALKFYASMRMEAKRSELLKDRFGNYVGIKSKLTVSKNKVARPFGVAFLEIMFNRGIVYEH 273
Query: 335 EIIDLALKHKFASKAGAMFTYNDRNFR-GKEAFKQFLVENESVREELVIKLREKLVVDHK 393
E+I+LALKH ++ +++ +N GKE L E + E++ +L K + H
Sbjct: 274 EVIELALKHNVVVRSDNAYSFKSQNIAIGKEKLFSVLAEKPELFEQIK-QLTIKQI--HS 330
Query: 394 EPQTA 398
P A
Sbjct: 331 PPPPA 335
>DICTYBASE|DDB_G0274901 [details] [associations]
symbol:DDB_G0274901 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009432 "SOS response" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0274901 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000012 GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 PANTHER:PTHR22942:SF1
RefSeq:XP_644118.1 ProteinModelPortal:Q555F1
EnsemblProtists:DDB0217538 GeneID:8619547 KEGG:ddi:DDB_G0274901
Uniprot:Q555F1
Length = 458
Score = 106 (42.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 97 VPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIA 141
+P +++G +LD L GGLP ++EIYG ++GK+TL++ +++
Sbjct: 82 IPTITSGITSLDYQLQIGGLPLNHIIEIYGDSSTGKSTLSMFILS 126
Score = 84 (34.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 23/107 (21%), Positives = 50/107 (46%)
Query: 151 VFIDAEHALDPSLAETIGVKTENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLV 210
++ID+E++ + A IG+ N + QP+ E+A L+ +++ L+
Sbjct: 156 LYIDSENSFNSEWASKIGMNLSNCTVFQPNNSEEAFELIKKSLKNQIFKVIILDSLSSLM 215
Query: 211 PKGELDGEMGDAHMA-MQARLMSQALRKLSHSLSLSQTILIFINQVR 256
+++ + + H + ++ L ++S+ L S IF NQ+R
Sbjct: 216 SIKDIESNLVENHYQNIGFDWITSNLNEISNLLIDSNCCFIFTNQMR 262
>GENEDB_PFALCIPARUM|PF11_0087 [details] [associations]
symbol:PF11_0087 "Rad51 homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281
SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035 GenomeReviews:AE014186_GR
RefSeq:XP_001347762.2 ProteinModelPortal:Q8IIS8 SMR:Q8IIS8
EnsemblProtists:PF11_0087:mRNA GeneID:810638 KEGG:pfa:PF11_0087
EuPathDB:PlasmoDB:PF3D7_1107400 Uniprot:Q8IIS8
Length = 350
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 101 STGSFALDIALGTGGLPKGRVVEIYGPEASGKT----TLALHVIAEAQRQGGY--CVFID 154
+TGS LD AL GG+ G + E++G +GK+ TLA+ ++ GG C++ID
Sbjct: 113 TTGSKQLD-ALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWID 171
Query: 155 AEHALDP----SLAETIGVK-TE---NLLLAQP-DCGEQALSLVD-TLIRSGXXXXXXXX 204
E P ++A+ G+ T+ N+ A+ +C Q L+D + + +
Sbjct: 172 TEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMMADARFALLIV 231
Query: 205 XXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG- 263
+ + E +G +A + + + LR L + +I NQV AK+
Sbjct: 232 DSATALYRSEY---IGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVAKVDAMSM 288
Query: 264 FGGPTEVTCGGNALKFYASVRLNIKR 289
FGG ++ GGN + + RL +++
Sbjct: 289 FGGHEKIPIGGNIIAHASQTRLYLRK 314
>UNIPROTKB|Q8IIS8 [details] [associations]
symbol:Rad51 "Rad51 homolog" species:36329 "Plasmodium
falciparum 3D7" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035
GenomeReviews:AE014186_GR RefSeq:XP_001347762.2
ProteinModelPortal:Q8IIS8 SMR:Q8IIS8 EnsemblProtists:PF11_0087:mRNA
GeneID:810638 KEGG:pfa:PF11_0087 EuPathDB:PlasmoDB:PF3D7_1107400
Uniprot:Q8IIS8
Length = 350
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 101 STGSFALDIALGTGGLPKGRVVEIYGPEASGKT----TLALHVIAEAQRQGGY--CVFID 154
+TGS LD AL GG+ G + E++G +GK+ TLA+ ++ GG C++ID
Sbjct: 113 TTGSKQLD-ALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWID 171
Query: 155 AEHALDP----SLAETIGVK-TE---NLLLAQP-DCGEQALSLVD-TLIRSGXXXXXXXX 204
E P ++A+ G+ T+ N+ A+ +C Q L+D + + +
Sbjct: 172 TEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMMADARFALLIV 231
Query: 205 XXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG- 263
+ + E +G +A + + + LR L + +I NQV AK+
Sbjct: 232 DSATALYRSEY---IGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVAKVDAMSM 288
Query: 264 FGGPTEVTCGGNALKFYASVRLNIKR 289
FGG ++ GGN + + RL +++
Sbjct: 289 FGGHEKIPIGGNIIAHASQTRLYLRK 314
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 131 (51.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 58/213 (27%), Positives = 97/213 (45%)
Query: 95 RHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQ----GG 148
+ V +STGS +D+ LG GG+ V E+YG +GKT LA + V+A+ G
Sbjct: 105 KRVNTISTGSKNVDVILG-GGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASG 163
Query: 149 YCVFIDAEHALDP----SLAETIGVK----TENLLLAQPDCGEQALSLVDTL-IRSGXXX 199
+ID E P S+AE GV EN+L A+ E + L++ +R
Sbjct: 164 KVAYIDTEGTFRPDRIRSIAERFGVDGSLALENILYARAFNSEHQMELINECSMRFAEDK 223
Query: 200 XXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVRAK 258
++ +D G ++ + + ++Q L +L+ LS I + + NQV++
Sbjct: 224 DFRLLIVDSIMALFRVDYS-GRGELSERQQKLAQMLSRLT-KLSEEYNIAVLLTNQVQSD 281
Query: 259 L-STFGF-GGPTEVTCGGNALKFYASVRLNIKR 289
+T F G GG+ L +S RL +++
Sbjct: 282 PGATMTFVAGGALKPIGGHILSHASSTRLFLRK 314
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 56/217 (25%), Positives = 95/217 (43%)
Query: 100 VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQ-GG---YCVFI 153
+STGS D LG GG + E+YG GKT L+ + VIA+ ++ GG +I
Sbjct: 98 ISTGSKQFDTILG-GGFQSSSISEVYGEFRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYI 156
Query: 154 DAEHALDPS----LAETIGVKTE----NLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXX 205
D E P +AE G+ E N+ A+ E L L++TL +
Sbjct: 157 DTEGTFRPDRIAQIAERYGLDAESTQENISYARALNSEHQLELLNTLSKEFAGGQYRLLV 216
Query: 206 XXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAK--LSTFG 263
++ +D G +A + + ++Q L +LSH ++ NQV++ S
Sbjct: 217 IDSIMNCFRVDFS-GRGELAERQQKLNQFLIRLSHLAEEFNVCVLMTNQVQSDPGASALF 275
Query: 264 FGGPTEVTCGGNALKFYASVRLNIKRIGLVKKGEETI 300
G GG+ L ++ R+ +++ G +G+E +
Sbjct: 276 AGADGRKPVGGHVLAHASTTRVLLRK-G---RGDERV 308
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 73/296 (24%), Positives = 124/296 (41%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+++ S G I + S + V +STGS D LG GG + E++G
Sbjct: 68 IKEAINKCLPS-ASGFITAMELSHQRKRVVRISTGSKQFDSILG-GGFQSMSISEVFGEF 125
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ + GG +ID E P +AE GV EN+
Sbjct: 126 RCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENI 185
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL + ++ +D G +A + + ++Q
Sbjct: 186 AYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDF-CGRGELADRQQKLNQF 244
Query: 235 LRKLSHSLSLSQTILIFINQVRAK--LSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGL 292
L KL+H ++ NQV++ S G GG+ L ++ R+ L
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRV------L 298
Query: 293 VKKGEETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK 348
++KG G + KI + P + A + + G GI ++I + H SK
Sbjct: 299 LRKGR---GEERVAKIQDSPDCPE-REATYLITNG-GIDDPDKLIVDVVDHSKKSK 349
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 73/296 (24%), Positives = 124/296 (41%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+++ S G I + S + V +STGS D LG GG + E++G
Sbjct: 68 IKEAINKCLPS-ASGFITAMELSHQRKRVVRISTGSKQFDSILG-GGFQSMSISEVFGEF 125
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ + GG +ID E P +AE GV EN+
Sbjct: 126 RCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENI 185
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL + ++ +D G +A + + ++Q
Sbjct: 186 AYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDF-CGRGELADRQQKLNQF 244
Query: 235 LRKLSHSLSLSQTILIFINQVRAK--LSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGL 292
L KL+H ++ NQV++ S G GG+ L ++ R+ L
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRV------L 298
Query: 293 VKKGEETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK 348
++KG G + KI + P + A + + G GI ++I + H SK
Sbjct: 299 LRKGR---GEERVAKIQDSPDCPE-REATYLITNG-GIDDPDKLIVDVVDHSKKSK 349
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 73/296 (24%), Positives = 124/296 (41%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+++ S G I + S + V +STGS D LG GG + E++G
Sbjct: 68 IKEAINKCLPS-ASGFITAMELSHQRKRVVRISTGSKQFDSILG-GGFQSMSISEVFGEF 125
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ + GG +ID E P +AE GV EN+
Sbjct: 126 RCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKENI 185
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL + ++ +D G +A + + ++Q
Sbjct: 186 AYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDF-CGRGELADRQQKLNQF 244
Query: 235 LRKLSHSLSLSQTILIFINQVRAK--LSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGL 292
L KL+H ++ NQV++ S G GG+ L ++ R+ L
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRV------L 298
Query: 293 VKKGEETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKFASK 348
++KG G + KI + P + A + + G GI ++I + H SK
Sbjct: 299 LRKGR---GEERVAKIQDSPDCPE-REATYLITNG-GIDDPDKLIVDVVDHSKKSK 349
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 60/248 (24%), Positives = 107/248 (43%)
Query: 69 LQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPE 128
+++A+ + + G I + S + V +STGS D LG GG + E++G
Sbjct: 69 IKEAIQKCLPA-ASGFITAMELSHQRKRVVKISTGSKQFDSILG-GGFQSMSISEVFGEF 126
Query: 129 ASGKTTLA--LHVIAEAQRQ-GGY---CVFIDAEHALDPS----LAETIGVKT----ENL 174
GKT L+ + V+A+ ++ GG +ID E P +AE V EN+
Sbjct: 127 RCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAERFSVDPDSAQENI 186
Query: 175 LLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQA 234
A+ E L L++TL R ++ +D G +A + + ++Q
Sbjct: 187 AYARALNSEHQLELLNTLSREFAGGEYRLLIIDSIMNCFRVD-YCGRGELADRQQKLNQF 245
Query: 235 LRKLSHSLSLSQTILIFINQVRAK--LSTFGFGGPTEVTCGGNALKFYASVRLNIKRIGL 292
L +L+H ++ NQV++ S G GG+ L ++ R+ +++ G
Sbjct: 246 LMRLAHMAEEFNVCVLMTNQVQSDPGASALFAGADGRKPVGGHVLAHASTTRVLLRK-G- 303
Query: 293 VKKGEETI 300
+GEE +
Sbjct: 304 --RGEERV 309
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 63/263 (23%), Positives = 116/263 (44%)
Query: 64 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 123
K + +++A+ + F G+ + + RS + + TGS +LD LG GG+ G + E
Sbjct: 86 KAEKIMKEAMKFVQMGFTTGAEVHVKRS----QLVQIRTGSASLDRLLG-GGIETGSITE 140
Query: 124 IYGPEASGKTTL--ALHVIAEAQ-RQGG---YCVFIDAEHALDP----SLAETIGVKT-- 171
+YG +GKT L +L V+ + GG C++ID P ++A+ + +
Sbjct: 141 VYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAH 200
Query: 172 --ENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVP-----KGELDGEMGD-AH 223
EN+ +A+ E ++L+ IR+G + + E G GD A
Sbjct: 201 VLENIAVARAYNSEHLMALI---IRAGAMMSESRYAVVIVDCATAHFRNEYTGR-GDLAE 256
Query: 224 MAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG--FGGPTEVTCGGNALKFYA 281
M+ + L KL+ ++ +I NQV A++ F + GG+ + +
Sbjct: 257 RQMKLSAFLKCLAKLADEYGVA---VIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMS 313
Query: 282 SVRLNIKRIGLVKKGEETIGSQI 304
+ RL +++ G KGE + +
Sbjct: 314 TTRLYLRK-G---KGENRVAKMV 332
>UNIPROTKB|B6JXU7 [details] [associations]
symbol:SJAG_01410 "DNA repair protein RAD51" species:402676
"Schizosaccharomyces japonicus yFS275" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0003684 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z EMBL:DS022225
RefSeq:XP_002172658.1 ProteinModelPortal:B6JXU7 GeneID:7048158
Uniprot:B6JXU7
Length = 370
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 62/256 (24%), Positives = 107/256 (41%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
+K D L +A + F + + RS + ++TGS LD L GG+ G +
Sbjct: 95 AKADKLLSEASKLVPMGFTTATEYHIRRS----ELITITTGSKQLDTLL-QGGVETGSIT 149
Query: 123 EIYGPEASGKT----TLALHVIAEAQRQGGY--CVFIDAEHALDP----SLAETIGVKTE 172
E++G +GK+ TLA+ GG C++ID E P ++AE G+ E
Sbjct: 150 ELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVAERYGLNGE 209
Query: 173 ----NLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELD----GEMGDAHM 224
N+ A+ + L L+ D GE+ M
Sbjct: 210 EVLDNVAYARAYNADHQLELLQQAANMMAESRFSLLVVDSCTALYRTDFSGRGELSARQM 269
Query: 225 AMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVR 284
+ AR M + L++L+ ++ ++ NQV A++ F + GGN L ++ R
Sbjct: 270 HL-ARFM-RTLQRLADEFGIA---VVITNQVVAQVDGISFNPDPKKPIGGNILAHSSTTR 324
Query: 285 LNIKRIGLVKKGEETI 300
L++++ G +GE+ I
Sbjct: 325 LSLRK-G---RGEQRI 336
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 63/263 (23%), Positives = 116/263 (44%)
Query: 64 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 123
K + +++A+ + F G+ + + RS + + TGS +LD LG GG+ G + E
Sbjct: 124 KAEKIMKEAMKFVQMGFTTGAEVHVKRS----QLVQIRTGSASLDRLLG-GGIETGSITE 178
Query: 124 IYGPEASGKTTL--ALHVIAEAQ-RQGG---YCVFIDAEHALDP----SLAETIGVKT-- 171
+YG +GKT L +L V+ + GG C++ID P ++A+ + +
Sbjct: 179 VYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAH 238
Query: 172 --ENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVP-----KGELDGEMGD-AH 223
EN+ +A+ E ++L+ IR+G + + E G GD A
Sbjct: 239 VLENIAVARAYNSEHLMALI---IRAGAMMSESRYAVVIVDCATAHFRNEYTGR-GDLAE 294
Query: 224 MAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG--FGGPTEVTCGGNALKFYA 281
M+ + L KL+ ++ +I NQV A++ F + GG+ + +
Sbjct: 295 RQMKLSAFLKCLAKLADEYGVA---VIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMS 351
Query: 282 SVRLNIKRIGLVKKGEETIGSQI 304
+ RL +++ G KGE + +
Sbjct: 352 TTRLYLRK-G---KGENRVAKMV 370
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 63/263 (23%), Positives = 116/263 (44%)
Query: 64 KKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVVE 123
K + +++A+ + F G+ + + RS + + TGS +LD LG GG+ G + E
Sbjct: 124 KAEKIMKEAMKFVQMGFTTGAEVHVKRS----QLVQIRTGSASLDRLLG-GGIETGSITE 178
Query: 124 IYGPEASGKTTL--ALHVIAEAQ-RQGG---YCVFIDAEHALDP----SLAETIGVKT-- 171
+YG +GKT L +L V+ + GG C++ID P ++A+ + +
Sbjct: 179 VYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYNMDSAH 238
Query: 172 --ENLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVP-----KGELDGEMGD-AH 223
EN+ +A+ E ++L+ IR+G + + E G GD A
Sbjct: 239 VLENIAVARAYNSEHLMALI---IRAGAMMSESRYAVVIVDCATAHFRNEYTGR-GDLAE 294
Query: 224 MAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG--FGGPTEVTCGGNALKFYA 281
M+ + L KL+ ++ +I NQV A++ F + GG+ + +
Sbjct: 295 RQMKLSAFLKCLAKLADEYGVA---VIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMS 351
Query: 282 SVRLNIKRIGLVKKGEETIGSQI 304
+ RL +++ G KGE + +
Sbjct: 352 TTRLYLRK-G---KGENRVAKMV 370
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 56/213 (26%), Positives = 98/213 (46%)
Query: 95 RHVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQ-GGYC- 150
+ V V+STGS +D LG GG+ + E+YG +GKT LA + V+A+ + GG
Sbjct: 103 KRVLVISTGSKLVDGILG-GGVMSQSITEVYGEYRTGKTQLAHTMSVVAQLPPEYGGAAG 161
Query: 151 --VFIDAEHALDP----SLAETIGVK----TENLLLAQPDCGEQALSLVDTL-IRSGXXX 199
+ID E P ++A+ GV EN+L A+ E + L++ R
Sbjct: 162 KVAYIDTEGTFRPDRIRAIADRFGVDGTMALENILYARAFNSEHQMELINECSARFAEDK 221
Query: 200 XXXXXXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVRAK 258
++ +D G ++ + + ++Q L KL+ LS I + + NQV++
Sbjct: 222 DFRLLIIDSIMALFRVDYS-GRGELSERQQKLAQMLSKLT-KLSEEFNIAVLMTNQVQSD 279
Query: 259 L-STFGF-GGPTEVTCGGNALKFYASVRLNIKR 289
+T F G GG+ L ++ R+ +++
Sbjct: 280 PGATMTFVAGGALKPIGGHILSHASATRIFLRK 312
>UNIPROTKB|F1N1D2 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:DAAA02014664 IPI:IPI00691200 Ensembl:ENSBTAT00000007794
Uniprot:F1N1D2
Length = 339
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 50/207 (24%), Positives = 92/207 (44%)
Query: 100 VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQGGYC---VFID 154
++TGS D LG GG+ + E +G +GKT L+ L V A+ GGY +FID
Sbjct: 101 ITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGIIFID 159
Query: 155 AEHALDPS----LAETIGVK----TENLLLAQPDCGEQALSLVDTLIRS--GXXXXXXXX 204
E+ P +A+ V +N+L A+ E + L+D +
Sbjct: 160 TENTFRPDRLRDIADRFNVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 219
Query: 205 XXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVRAKL-STF 262
++ +D G +A + + ++Q L +L +S + +F+ NQ+ A +T
Sbjct: 220 IIDSIMALFRVDFS-GRGELAERQQKLAQMLSRLQ-KISEEYNVAVFVTNQMTADPGATM 277
Query: 263 GFGGPTEVTCGGNALKFYASVRLNIKR 289
F + GG+ L ++ R+++++
Sbjct: 278 TFQADPKKPIGGHILAHASTTRISLRK 304
>MGI|MGI:105393 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007129
"synapsis" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:105393 GO:GO:0005524 GO:GO:0005654
GO:GO:0007286 GO:GO:0006281 GO:GO:0016887 Reactome:REACT_120463
GO:GO:0003690 GO:GO:0003697 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 Reactome:REACT_27235
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:D58419 EMBL:D64107 IPI:IPI00126394 PIR:JC4191
RefSeq:NP_034189.1 UniGene:Mm.2524 ProteinModelPortal:Q61880
SMR:Q61880 STRING:Q61880 PhosphoSite:Q61880 PRIDE:Q61880
Ensembl:ENSMUST00000023065 GeneID:13404 KEGG:mmu:13404
GeneTree:ENSGT00550000075091 InParanoid:Q61880 NextBio:283799
Bgee:Q61880 Genevestigator:Q61880 GermOnline:ENSMUSG00000022429
GO:GO:0000150 Uniprot:Q61880
Length = 340
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 51/208 (24%), Positives = 92/208 (44%)
Query: 100 VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQGGYC----VFI 153
++TGS D LG GG+ + E +G +GKT L+ L V A+ GGY +FI
Sbjct: 101 ITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFI 159
Query: 154 DAEHALDPS----LAETIGVKTE----NLLLAQPDCGEQALSLVDTLIRS--GXXXXXXX 203
D E+ P +A+ V E N+L A+ E + L+D +
Sbjct: 160 DTENTFRPDRLRDIADRFNVDHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKL 219
Query: 204 XXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVRAKL-ST 261
++ +D G +A + + ++Q L +L +S + +F+ NQ+ A +T
Sbjct: 220 LIIDSIMALFRVDFS-GRGELAERQQKLAQMLSRLQ-KISEEYNVAVFVTNQMTADPGAT 277
Query: 262 FGFGGPTEVTCGGNALKFYASVRLNIKR 289
F + GG+ L ++ R+++++
Sbjct: 278 MTFQADPKKPIGGHILAHASTTRISLRK 305
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 66/289 (22%), Positives = 115/289 (39%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
+K D L +A + F + + RS + ++TGS LD LG GG+ G +
Sbjct: 127 AKADKLLNEAARLVPMGFVTAADFHMRRS----ELICLTTGSKNLDTLLG-GGVETGSIT 181
Query: 123 EIYGPEASGKTTLALHVIAEAQR------QG-GYCVFIDAEHALDP----SLAETIGVKT 171
E++G +GK+ L H +A + G G C++ID E P S+A+ G+
Sbjct: 182 ELFGEFRTGKSQLC-HTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDP 240
Query: 172 E----NLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELDGEMGDAHMAMQ 227
+ N+ A+ + L L+D + ++ D G ++ +
Sbjct: 241 DDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFS-GRGELSAR 299
Query: 228 ARLMSQALRKLSHSLSLSQTILIFINQVRAKLST-FGFGGPTEVTCGGNALKFYASVRLN 286
+++ +R L ++ NQV A++ F + GGN + ++ RL
Sbjct: 300 QMHLAKFMRALQRLADQFGVAVVVTNQVVAQVDGGMAFNPDPKKPIGGNIMAHSSTTRLG 359
Query: 287 IKRIGLVKKGEETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESE 335
K KG+ G Q K+V + P + E G G RE +
Sbjct: 360 FK------KGK---GCQRLCKVVDSPCLPEAECVFAIYEDGVGDPREED 399
>UNIPROTKB|Q14565 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005694 "chromosome" evidence=ISS] [GO:0007126
"meiosis" evidence=TAS] [GO:0007292 "female gamete generation"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0007286
GO:GO:0003677 GO:GO:0007283 Reactome:REACT_111183 GO:GO:0001541
GO:GO:0000794 GO:GO:0001556 GO:GO:0000781 GO:GO:0007292
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:D63882 EMBL:D64108
EMBL:CR456486 EMBL:AK292617 EMBL:AY520538 EMBL:AL022320
EMBL:BC125163 EMBL:BC125164 IPI:IPI00031512 PIR:S62354
RefSeq:NP_008999.2 UniGene:Hs.339396 PDB:1V5W PDB:2ZJB PDBsum:1V5W
PDBsum:2ZJB ProteinModelPortal:Q14565 SMR:Q14565 DIP:DIP-24192N
IntAct:Q14565 MINT:MINT-3029876 STRING:Q14565 PhosphoSite:Q14565
DMDM:13878923 PaxDb:Q14565 PRIDE:Q14565 DNASU:11144
Ensembl:ENST00000216024 GeneID:11144 KEGG:hsa:11144 UCSC:uc003avz.1
CTD:11144 GeneCards:GC22M038914 HGNC:HGNC:2927 HPA:CAB015397
HPA:HPA001232 MIM:602721 neXtProt:NX_Q14565 PharmGKB:PA27377
HOVERGEN:HBG001504 InParanoid:Q14565 OrthoDB:EOG4F7NKC
PhylomeDB:Q14565 EvolutionaryTrace:Q14565 GenomeRNAi:11144
NextBio:42364 ArrayExpress:Q14565 Bgee:Q14565 CleanEx:HS_DMC1
Genevestigator:Q14565 GermOnline:ENSG00000100206 Uniprot:Q14565
Length = 340
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 50/208 (24%), Positives = 92/208 (44%)
Query: 100 VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQGGY----CVFI 153
++TGS D LG GG+ + E +G +GKT L+ L V A+ GGY +FI
Sbjct: 101 ITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFI 159
Query: 154 DAEHALDPS----LAETIGVK----TENLLLAQPDCGEQALSLVDTLIRS--GXXXXXXX 203
D E+ P +A+ V +N+L A+ E + L+D +
Sbjct: 160 DTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKL 219
Query: 204 XXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVRAKL-ST 261
++ +D G +A + + ++Q L +L +S + +F+ NQ+ A +T
Sbjct: 220 LIIDSIMALFRVDFS-GRGELAERQQKLAQMLSRLQ-KISEEYNVAVFVTNQMTADPGAT 277
Query: 262 FGFGGPTEVTCGGNALKFYASVRLNIKR 289
F + GG+ L ++ R+++++
Sbjct: 278 MTFQADPKKPIGGHILAHASTTRISLRK 305
>UNIPROTKB|F1SKQ1 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:FP102457 RefSeq:XP_003126070.1
Ensembl:ENSSSCT00000000109 GeneID:100522866 KEGG:ssc:100522866
Uniprot:F1SKQ1
Length = 340
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 50/208 (24%), Positives = 92/208 (44%)
Query: 100 VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQGGYC----VFI 153
++TGS D LG GG+ + E +G +GKT L+ L V A+ GGY +FI
Sbjct: 101 ITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFI 159
Query: 154 DAEHALDPS----LAETIGVK----TENLLLAQPDCGEQALSLVDTLIRS--GXXXXXXX 203
D E+ P +A+ V +N+L A+ E + L+D +
Sbjct: 160 DTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKL 219
Query: 204 XXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVRAKL-ST 261
++ +D G +A + + ++Q L +L +S + +F+ NQ+ A +T
Sbjct: 220 LIIDSIMALFRVDFS-GRGELAERQQKLAQMLSRLQ-KISEEYNVAVFVTNQMTADPGAT 277
Query: 262 FGFGGPTEVTCGGNALKFYASVRLNIKR 289
F + GG+ L ++ R+++++
Sbjct: 278 MTFQADPKKPVGGHILAHASTTRISLRK 305
>POMBASE|SPAC644.14c [details] [associations]
symbol:rad51 "RecA family recombinase Rad51/Rhp51"
species:4896 "Schizosaccharomyces pombe" [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IMP] [GO:0000723 "telomere maintenance" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0000794 "condensed nuclear chromosome" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006311 "meiotic gene conversion" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=IGI] [GO:0007533
"mating type switching" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0030998 "linear element" evidence=IDA]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=TAS] [GO:0042148 "strand invasion" evidence=TAS]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IPI]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
PomBase:SPAC644.14c GO:GO:0005524 GO:GO:0005635 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003684 GO:GO:0051260 GO:GO:0000790
GO:GO:0000724 GO:GO:0006312 GO:GO:0000723 SUPFAM:SSF47794
GO:GO:0042138 GO:GO:0043047 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0006311 GO:GO:0007533
GO:GO:0030998 GO:GO:0003691 GO:GO:0000711 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D13805 EMBL:Z22691 EMBL:Z24756 PIR:S42107
ProteinModelPortal:P36601 SMR:P36601 DIP:DIP-29235N IntAct:P36601
MINT:MINT-239321 STRING:P36601 OrthoDB:EOG41CB4Z NextBio:20804587
GO:GO:0033170 GO:GO:0042148 Uniprot:P36601
Length = 365
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 61/256 (23%), Positives = 107/256 (41%)
Query: 63 SKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFALDIALGTGGLPKGRVV 122
+K D L +A + F + + RS + ++TGS LD L GG+ G +
Sbjct: 91 AKADKLLGEASKLVPMGFTTATEYHIRRS----ELITITTGSKQLDTLL-QGGVETGSIT 145
Query: 123 EIYGPEASGKT----TLALHVIAEAQRQGGY--CVFIDAEHALDP----SLAETIGVKTE 172
E++G +GK+ TLA+ GG C++ID E P ++A+ G+ E
Sbjct: 146 ELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVADRYGLNGE 205
Query: 173 ----NLLLAQPDCGEQALSLVDTLIRSGXXXXXXXXXXXXLVPKGELD----GEMGDAHM 224
N+ A+ + L L+ D GE+ M
Sbjct: 206 EVLDNVAYARAYNADHQLELLQQAANMMSESRFSLLVVDSCTALYRTDFSGRGELSARQM 265
Query: 225 AMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFGFGGPTEVTCGGNALKFYASVR 284
+ AR M + L++L+ ++ ++ NQV A++ F + GGN L ++ R
Sbjct: 266 HL-ARFM-RTLQRLADEFGIA---VVITNQVVAQVDGISFNPDPKKPIGGNILAHSSTTR 320
Query: 285 LNIKRIGLVKKGEETI 300
L++++ G +GE+ I
Sbjct: 321 LSLRK-G---RGEQRI 332
>UNIPROTKB|E2RK50 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314 RefSeq:XP_849984.1
ProteinModelPortal:E2RK50 Ensembl:ENSCAFT00000002150 GeneID:608268
KEGG:cfa:608268 NextBio:20893933 Uniprot:E2RK50
Length = 340
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 50/208 (24%), Positives = 92/208 (44%)
Query: 100 VSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLA--LHVIAEAQRQGGYC----VFI 153
++TGS D LG GG+ + E +G +GKT L+ L V A+ GGY +FI
Sbjct: 101 ITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFI 159
Query: 154 DAEHALDPS----LAETIGVK----TENLLLAQPDCGEQALSLVDTLIRS--GXXXXXXX 203
D E+ P +A+ V +N+L A+ E + L+D +
Sbjct: 160 DTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKL 219
Query: 204 XXXXXLVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFI-NQVRAKL-ST 261
++ +D G +A + + ++Q L +L +S + +F+ NQ+ A +T
Sbjct: 220 LIIDSIMALFRVDFS-GRGELAERQQKLAQMLSRLQ-KISEEYNVAVFVTNQMTADPGAT 277
Query: 262 FGFGGPTEVTCGGNALKFYASVRLNIKR 289
F + GG+ L ++ R+++++
Sbjct: 278 MTFQADPKKPIGGHILAHASTTRVSLRK 305
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 427 371 0.00086 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 43
No. of states in DFA: 606 (64 KB)
Total size of DFA: 203 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.64u 0.10s 26.74t Elapsed: 00:00:01
Total cpu time: 26.65u 0.10s 26.75t Elapsed: 00:00:01
Start: Fri May 10 11:13:58 2013 End: Fri May 10 11:13:59 2013