Query 014273
Match_columns 427
No_of_seqs 457 out of 4193
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 08:37:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014273.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014273hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 2.3E-37 7.8E-42 287.8 25.5 252 140-425 6-280 (285)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.5E-37 5.1E-42 308.0 24.0 200 141-351 16-223 (437)
3 1n11_A Ankyrin; clathrin, BAND 100.0 6.5E-37 2.2E-41 303.4 25.6 274 141-425 49-371 (437)
4 2xai_A ASB-9, ankyrin repeat a 100.0 5.5E-37 1.9E-41 283.0 22.5 234 141-395 5-246 (261)
5 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-36 4.7E-41 290.7 25.5 266 140-426 26-329 (337)
6 1yyh_A HN1;, notch 1, ankyrin 100.0 2.8E-37 9.6E-42 283.5 18.0 217 139-365 10-248 (253)
7 4b93_B Ankyrin repeat domain-c 100.0 9.9E-38 3.4E-42 289.1 14.5 204 140-352 12-230 (269)
8 3d9h_A CDNA FLJ77766, highly s 100.0 2.7E-36 9.1E-41 282.1 21.7 248 138-424 14-280 (285)
9 1oy3_D Transcription factor in 100.0 4.1E-36 1.4E-40 279.5 20.4 201 140-351 10-269 (282)
10 3b7b_A Euchromatic histone-lys 100.0 4.6E-36 1.6E-40 272.2 19.8 203 140-353 12-223 (237)
11 3aji_A 26S proteasome non-ATPa 100.0 3.9E-36 1.3E-40 271.6 19.0 213 141-364 8-229 (231)
12 1k1a_A B-cell lymphoma 3-encod 100.0 1.5E-36 5.1E-41 275.9 16.1 213 140-363 10-239 (241)
13 1wdy_A 2-5A-dependent ribonucl 100.0 1.6E-35 5.4E-40 275.4 23.2 221 140-368 40-281 (285)
14 3utm_A Tankyrase-1; tankyrase, 100.0 1E-35 3.6E-40 285.2 21.6 219 138-367 23-307 (351)
15 3ljn_A Hypothetical protein; a 100.0 7.2E-36 2.5E-40 288.8 20.1 222 139-366 20-270 (364)
16 2fo1_E LIN-12 protein; beta-ba 100.0 2.5E-36 8.6E-41 293.1 15.9 217 139-365 125-371 (373)
17 3d9h_A CDNA FLJ77766, highly s 100.0 1.3E-35 4.5E-40 277.4 18.6 208 140-362 60-275 (285)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 1.7E-35 5.9E-40 271.6 17.7 218 164-406 2-242 (253)
19 2f8y_A Notch homolog 1, transl 100.0 1.5E-35 5.2E-40 266.3 16.7 208 150-367 2-218 (223)
20 2dzn_A Probable 26S proteasome 100.0 3.9E-35 1.3E-39 264.4 18.7 201 141-350 4-218 (228)
21 2xai_A ASB-9, ankyrin repeat a 100.0 7.4E-35 2.5E-39 268.7 20.6 185 173-367 2-193 (261)
22 3b7b_A Euchromatic histone-lys 100.0 2.2E-34 7.6E-39 261.1 22.2 211 169-402 6-225 (237)
23 1oy3_D Transcription factor in 100.0 1E-34 3.4E-39 270.0 19.3 189 171-368 6-253 (282)
24 3kea_A K1L; tropism, ANK repea 100.0 8.5E-35 2.9E-39 271.9 18.1 205 148-368 9-223 (285)
25 1s70_B 130 kDa myosin-binding 100.0 3.7E-35 1.3E-39 275.7 14.4 199 140-349 41-274 (299)
26 3eu9_A Huntingtin-interacting 100.0 4.5E-34 1.5E-38 258.9 19.2 216 140-366 10-236 (240)
27 3aji_A 26S proteasome non-ATPa 100.0 1.3E-33 4.5E-38 255.0 21.8 217 174-424 6-231 (231)
28 3utm_A Tankyrase-1; tankyrase, 100.0 7.1E-34 2.4E-38 272.4 21.1 211 140-362 59-331 (351)
29 2fo1_E LIN-12 protein; beta-ba 100.0 6.9E-35 2.4E-39 283.0 13.9 246 140-423 95-371 (373)
30 1k1a_A B-cell lymphoma 3-encod 100.0 7.7E-34 2.6E-38 257.9 20.0 208 171-401 6-230 (241)
31 4g8k_A 2-5A-dependent ribonucl 100.0 8.6E-34 2.9E-38 271.3 21.2 221 140-368 60-301 (337)
32 3kea_A K1L; tropism, ANK repea 100.0 2.6E-34 9E-39 268.5 12.9 206 140-365 32-246 (285)
33 3ljn_A Hypothetical protein; a 100.0 5.9E-34 2E-38 275.4 15.7 219 170-424 16-270 (364)
34 2rfa_A Transient receptor pote 100.0 1.9E-33 6.6E-38 254.1 17.6 188 174-367 3-224 (232)
35 2dzn_A Probable 26S proteasome 100.0 1E-32 3.5E-37 248.5 21.4 203 174-396 2-217 (228)
36 4gpm_A Engineered protein OR26 100.0 4.8E-33 1.7E-37 238.9 17.5 155 205-368 6-164 (169)
37 3hra_A Ankyrin repeat family p 100.0 7.4E-33 2.5E-37 244.5 19.2 182 174-363 5-201 (201)
38 4b93_B Ankyrin repeat domain-c 100.0 4.9E-33 1.7E-37 257.5 17.4 186 173-367 10-212 (269)
39 1ikn_D Protein (I-kappa-B-alph 100.0 5.3E-34 1.8E-38 258.7 10.2 188 171-367 5-211 (236)
40 2etb_A Transient receptor pote 100.0 2.2E-33 7.6E-38 257.8 13.1 187 174-366 2-247 (256)
41 4gpm_A Engineered protein OR26 100.0 2.9E-32 9.9E-37 234.1 17.2 151 176-335 6-164 (169)
42 1s70_B 130 kDa myosin-binding 100.0 3.5E-32 1.2E-36 255.4 17.9 187 173-367 39-259 (299)
43 2pnn_A Transient receptor pote 100.0 2.7E-32 9.3E-37 253.0 13.1 189 171-365 10-258 (273)
44 2f8y_A Notch homolog 1, transl 100.0 6.9E-31 2.4E-35 235.8 20.2 184 140-334 26-218 (223)
45 1sw6_A Regulatory protein SWI6 100.0 1.3E-32 4.6E-37 262.1 8.9 193 141-351 99-327 (327)
46 3eu9_A Huntingtin-interacting 100.0 5E-31 1.7E-35 238.8 18.7 221 171-424 6-236 (240)
47 2rfa_A Transient receptor pote 100.0 2.9E-31 1E-35 239.8 16.7 189 141-337 5-227 (232)
48 3jxi_A Vanilloid receptor-rela 100.0 1.3E-31 4.5E-36 246.5 13.4 188 174-367 5-252 (260)
49 1ikn_D Protein (I-kappa-B-alph 100.0 2.2E-32 7.4E-37 248.1 6.9 201 141-349 10-228 (236)
50 3hra_A Ankyrin repeat family p 100.0 3.2E-30 1.1E-34 227.6 18.4 182 139-330 5-201 (201)
51 2rfm_A Putative ankyrin repeat 100.0 8.3E-31 2.8E-35 230.0 14.2 160 196-364 28-191 (192)
52 4hbd_A KN motif and ankyrin re 100.0 4.1E-31 1.4E-35 245.7 12.9 180 175-363 77-273 (276)
53 2etb_A Transient receptor pote 100.0 6E-31 2E-35 241.6 13.5 188 139-334 2-248 (256)
54 2pnn_A Transient receptor pote 100.0 5.1E-31 1.7E-35 244.5 12.2 201 139-345 13-272 (273)
55 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.7E-29 6E-34 216.9 17.1 155 200-363 11-169 (169)
56 3v31_A Ankyrin repeat family A 100.0 1.2E-29 4.2E-34 217.2 15.8 155 202-365 2-160 (167)
57 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.6E-29 8.8E-34 214.0 14.6 153 202-364 4-161 (162)
58 3jxi_A Vanilloid receptor-rela 100.0 8.3E-30 2.9E-34 234.4 11.5 190 139-334 5-252 (260)
59 3v30_A DNA-binding protein rfx 100.0 2.1E-29 7E-34 216.9 13.2 154 203-365 2-160 (172)
60 3v30_A DNA-binding protein rfx 100.0 6.3E-29 2.1E-33 213.9 15.5 161 174-343 2-171 (172)
61 1awc_B Protein (GA binding pro 100.0 7.3E-29 2.5E-33 209.3 15.5 147 203-359 2-152 (153)
62 1sw6_A Regulatory protein SWI6 100.0 5.1E-30 1.7E-34 244.2 9.1 217 150-396 58-325 (327)
63 1ihb_A P18-INK4C(INK6), cyclin 100.0 2E-28 6.9E-33 208.4 16.7 149 174-332 5-162 (162)
64 3twr_A Tankyrase-2; ankyrin re 100.0 7.3E-29 2.5E-33 212.0 12.8 157 199-364 4-164 (165)
65 3f6q_A Integrin-linked protein 100.0 9.6E-29 3.3E-33 214.3 13.2 160 201-368 3-166 (179)
66 4hbd_A KN motif and ankyrin re 100.0 1.8E-28 6.2E-33 227.8 15.7 179 142-330 79-273 (276)
67 2rfm_A Putative ankyrin repeat 100.0 2.8E-28 9.7E-33 213.8 14.9 151 171-330 32-190 (192)
68 3v31_A Ankyrin repeat family A 100.0 3.6E-28 1.2E-32 208.1 13.4 153 173-334 2-162 (167)
69 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.5E-27 5.1E-32 204.8 17.0 149 173-330 13-169 (169)
70 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.2E-27 4E-32 202.4 15.3 149 203-361 2-154 (156)
71 2vge_A RELA-associated inhibit 100.0 6.2E-31 2.1E-35 237.6 -5.6 193 156-360 2-208 (229)
72 3f6q_A Integrin-linked protein 99.9 1.6E-27 5.5E-32 206.6 12.7 158 174-340 5-171 (179)
73 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.6E-28 5.3E-33 223.3 5.8 168 174-351 5-192 (239)
74 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.4E-27 4.9E-32 216.9 10.6 157 201-367 3-166 (239)
75 1awc_B Protein (GA binding pro 99.9 1.6E-26 5.3E-31 195.0 16.1 142 175-326 3-152 (153)
76 1d9s_A Cyclin-dependent kinase 99.9 4E-27 1.4E-31 194.6 11.4 129 231-364 2-135 (136)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4E-26 1.4E-30 192.9 17.5 145 174-329 2-155 (156)
78 2vge_A RELA-associated inhibit 99.9 1.6E-28 5.5E-33 221.7 2.0 173 188-369 3-194 (229)
79 1bi7_B P16INK4A, MTS1, multipl 99.9 2.8E-27 9.7E-32 200.3 9.5 140 198-347 7-151 (156)
80 3twr_A Tankyrase-2; ankyrin re 99.9 8.6E-27 3E-31 199.0 11.7 150 172-331 6-164 (165)
81 1d9s_A Cyclin-dependent kinase 99.9 9E-27 3.1E-31 192.5 9.4 130 193-332 2-136 (136)
82 3t8k_A Uncharacterized protein 99.9 5.3E-27 1.8E-31 204.5 6.7 150 203-362 6-176 (186)
83 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-25 5.8E-30 184.8 13.5 122 241-363 11-136 (136)
84 3c5r_A BARD-1, BRCA1-associate 99.9 3.1E-26 1.1E-30 189.4 8.0 127 231-362 1-131 (137)
85 2aja_A Ankyrin repeat family p 99.9 2.8E-27 9.4E-32 228.4 -1.7 188 142-356 68-270 (376)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.5E-24 5.3E-29 175.8 14.5 122 243-365 1-126 (126)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 2.7E-25 9.3E-30 188.1 9.7 126 241-368 9-139 (156)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.3E-24 7.8E-29 174.8 13.8 122 202-332 1-126 (126)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 3E-24 1E-28 177.2 13.2 122 200-330 11-136 (136)
90 3aaa_C Myotrophin, protein V-1 99.9 3.8E-24 1.3E-28 173.4 13.0 108 241-349 4-115 (123)
91 3t8k_A Uncharacterized protein 99.9 2.8E-25 9.6E-30 193.6 6.2 155 175-338 7-185 (186)
92 2b0o_E UPLC1; arfgap, structur 99.9 7.8E-24 2.7E-28 198.8 10.4 141 201-353 149-299 (301)
93 3c5r_A BARD-1, BRCA1-associate 99.9 2.6E-24 9E-29 177.7 6.1 130 193-332 1-134 (137)
94 3deo_A Signal recognition part 99.9 7.3E-24 2.5E-28 184.2 8.8 111 241-353 41-156 (183)
95 2aja_A Ankyrin repeat family p 99.9 8.5E-26 2.9E-30 217.9 -4.2 202 141-363 94-342 (376)
96 3ehr_A Osteoclast-stimulating 99.9 1.1E-23 3.7E-28 188.9 8.5 127 241-367 70-200 (222)
97 3ehr_A Osteoclast-stimulating 99.9 1.3E-23 4.3E-28 188.5 6.6 135 198-341 68-207 (222)
98 3ui2_A Signal recognition part 99.9 1.2E-22 4.1E-27 185.0 11.7 120 241-369 42-166 (244)
99 1dcq_A PYK2-associated protein 99.9 7.5E-22 2.6E-26 183.1 16.4 123 243-366 129-264 (278)
100 3deo_A Signal recognition part 99.9 7.8E-23 2.7E-27 177.7 8.7 136 200-362 41-181 (183)
101 3ui2_A Signal recognition part 99.9 1.4E-22 4.7E-27 184.6 10.2 136 201-363 43-183 (244)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.3E-22 1.8E-26 152.3 11.1 90 273-363 2-91 (93)
103 3aaa_C Myotrophin, protein V-1 99.9 3.1E-22 1.1E-26 162.0 8.7 110 200-318 4-117 (123)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.4E-21 4.9E-26 149.9 11.9 89 243-332 1-93 (93)
105 2l6b_A NR1C; ankyrin, consensu 99.9 3.7E-22 1.3E-26 159.5 7.1 104 240-344 5-112 (115)
106 3lvq_E ARF-GAP with SH3 domain 99.9 2.3E-21 7.9E-26 194.8 14.5 132 203-340 132-273 (497)
107 3jue_A Arfgap with coiled-coil 99.9 2E-21 6.9E-26 186.7 13.4 146 199-351 195-348 (368)
108 3lvq_E ARF-GAP with SH3 domain 99.9 3.1E-21 1.1E-25 193.8 13.9 124 244-368 132-268 (497)
109 2b0o_E UPLC1; arfgap, structur 99.9 1.9E-20 6.4E-25 175.7 18.3 120 243-363 150-282 (301)
110 1dcq_A PYK2-associated protein 99.8 6E-21 2E-25 177.1 13.9 125 203-333 130-264 (278)
111 3jue_A Arfgap with coiled-coil 99.8 4.5E-21 1.5E-25 184.3 13.1 123 241-364 196-325 (368)
112 2l6b_A NR1C; ankyrin, consensu 99.8 6.4E-20 2.2E-24 146.4 7.2 98 269-367 5-102 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.2E-19 7.4E-24 142.3 10.0 90 268-358 19-108 (110)
114 3htm_A Speckle-type POZ protei 99.7 1.8E-18 6.3E-23 148.5 7.2 147 21-200 17-163 (172)
115 2zgd_A 3 repeat synthetic anky 99.7 1E-17 3.6E-22 132.5 10.6 86 240-326 20-109 (110)
116 4eoz_A Speckle-type POZ protei 99.7 1.7E-18 5.8E-23 144.3 2.6 140 18-190 5-144 (145)
117 3hve_A Gigaxonin; ubiquitin, c 99.7 4.2E-17 1.4E-21 149.2 11.4 137 33-199 25-161 (256)
118 2vkp_A BTB/POZ domain-containi 99.7 4.1E-17 1.4E-21 128.8 9.5 99 33-161 2-104 (109)
119 2if5_A Zinc finger and BTB dom 99.7 2.1E-17 7.3E-22 132.9 7.6 100 33-161 19-118 (120)
120 3b84_A Zinc finger and BTB dom 99.7 1.9E-17 6.5E-22 132.8 7.0 97 33-162 18-114 (119)
121 2ppi_A Gigaxonin; BTB domain, 99.7 4.8E-17 1.7E-21 134.9 9.6 102 33-161 41-142 (144)
122 1buo_A POZ domain, protein (pr 99.7 2E-17 6.9E-22 133.1 6.0 96 33-162 22-117 (121)
123 2q81_A MIZ-1 protein; BTB/POZ 99.7 2.8E-17 9.6E-22 131.8 6.8 95 33-161 21-115 (119)
124 1r29_A B-cell lymphoma 6 prote 99.7 5.7E-17 1.9E-21 131.7 8.4 99 33-161 23-122 (127)
125 2vpk_A Myoneurin; transcriptio 99.7 5.5E-17 1.9E-21 129.6 7.7 98 33-161 16-113 (116)
126 2yy9_A Zinc finger and BTB dom 99.7 4E-17 1.4E-21 134.0 6.8 98 33-163 19-116 (135)
127 3hqi_A Speckle-type POZ protei 99.7 3.9E-17 1.3E-21 153.9 6.6 146 22-200 158-303 (312)
128 2z8h_A Transcription regulator 99.7 7.6E-17 2.6E-21 132.9 6.5 100 33-163 30-130 (138)
129 3i3n_A Kelch-like protein 11; 99.7 4.8E-17 1.6E-21 150.8 5.4 141 33-199 26-169 (279)
130 3fkc_A Transcriptional regulat 99.6 1.8E-16 6.2E-21 126.3 4.9 90 33-156 25-115 (116)
131 2ihc_A Transcription regulator 99.6 4.4E-17 1.5E-21 131.7 0.9 97 33-160 23-120 (124)
132 3m5b_A Zinc finger and BTB dom 99.6 1.8E-16 6.3E-21 126.7 3.8 94 31-162 22-115 (119)
133 3ohu_A Transcription regulator 99.6 6.7E-17 2.3E-21 130.9 1.1 94 33-157 26-120 (125)
134 3ga1_A Nucleus accumbens-assoc 99.6 1.4E-16 4.9E-21 129.6 2.8 96 33-161 27-123 (129)
135 2ast_A S-phase kinase-associat 98.5 3.3E-07 1.1E-11 76.6 7.4 115 42-165 3-125 (159)
136 4ajy_C Transcription elongatio 98.2 3.9E-06 1.3E-10 63.7 7.3 59 42-108 4-63 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 97.7 6.8E-05 2.3E-09 60.9 7.4 111 42-166 4-121 (141)
138 2p1m_A SKP1-like protein 1A; F 97.2 7.8E-05 2.7E-09 62.0 1.1 111 42-165 6-124 (160)
139 3drz_A BTB/POZ domain-containi 96.0 0.021 7.1E-07 43.7 7.4 95 41-161 7-103 (107)
140 1hv2_A Elongin C, ELC1; protei 96.0 0.011 3.7E-07 44.5 5.4 57 42-109 6-63 (99)
141 2fnj_C Transcription elongatio 95.8 0.01 3.5E-07 44.4 4.5 60 42-109 3-63 (96)
142 3v7d_A Suppressor of kinetocho 92.3 0.37 1.3E-05 40.0 7.2 119 41-165 8-132 (169)
143 3drx_A BTB/POZ domain-containi 91.3 1 3.5E-05 38.2 8.9 96 41-162 13-110 (202)
144 1vcb_B Protein (elongin C); tu 89.8 0.39 1.3E-05 36.8 4.5 60 42-109 19-79 (112)
145 3kvt_A Potassium channel prote 58.5 6.1 0.00021 30.1 2.7 66 42-116 7-73 (115)
146 1t1d_A Protein (potassium chan 38.3 17 0.00059 26.8 2.3 85 42-154 3-89 (100)
147 1s1g_A Potassium voltage-gated 36.6 33 0.0011 26.4 3.7 66 41-115 14-79 (124)
148 2b19_A Neuropeptide K, NPK; he 35.2 25 0.00086 19.4 2.0 17 406-422 5-21 (36)
149 2nz0_B Potassium voltage-gated 30.1 39 0.0013 26.6 3.3 66 41-115 36-101 (140)
150 1gp8_A Protein (scaffolding pr 23.1 66 0.0022 18.9 2.4 18 248-265 17-34 (40)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-37 Score=287.85 Aligned_cols=252 Identities=18% Similarity=0.062 Sum_probs=225.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++|+.|+..|..+++++|+++|.+++.+ ....+.||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS 84 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC
Confidence 46899999999999999999999999866 2344699999999999977 778889999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC-------------CCCCchHHHHHH
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV-------------TLDDAFALHYAA 281 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~-------------d~~g~t~Lh~A~ 281 (427)
.+++++|+ +.|++++.. +..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+
T Consensus 85 ~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 156 (285)
T 1wdy_A 85 VKLLKLFL-----SKGADVNEC---DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 156 (285)
T ss_dssp HHHHHHHH-----HTTCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHH
T ss_pred HHHHHHHH-----HcCCCCCcc---CcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHH
Confidence 99999999 789999988 889999999999999999999999998 33 556899999999
Q ss_pred HcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchh
Q 014273 282 AYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE----PAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYI 357 (427)
Q Consensus 282 ~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~----~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~ 357 (427)
..|+.+++++|++..+++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..++...++
T Consensus 157 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 236 (285)
T 1wdy_A 157 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 236 (285)
T ss_dssp HHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 99999999999998449999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHh-cCCCccchhhhHHHHHHHHhccCCCCCcchhhhhccchhhhhHhhhccchhHHHHHHhhhhhee
Q 014273 358 EASK-QGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEKKGDIYFLVLVHCLLIV 425 (427)
Q Consensus 358 ~~~~-~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~~~l~~~~~~~~ 425 (427)
.+.+ .|..+.. ....|.++++.+... ++.+++++|+++|+++-
T Consensus 237 ~Ll~~~g~~~~~--------------~~~~g~t~l~~A~~~-----------~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 237 RLLEQEHIEIND--------------TDSDGKTALLLAVEL-----------KLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHHSSSCCTTC--------------CCTTSCCHHHHHHHT-----------TCHHHHHHHHHHSSCSC
T ss_pred HHHhccCCCccc--------------cCCCCCcHHHHHHHc-----------CcHHHHHHHHHcCCCCC
Confidence 8888 6666442 224677888877654 46688999999999874
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-37 Score=308.00 Aligned_cols=200 Identities=20% Similarity=0.129 Sum_probs=102.9
Q ss_pred HHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcH
Q 014273 141 ELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVS 216 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~ 216 (427)
++||+|+..|..+++++|+++|++++..+..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++.
T Consensus 16 t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~ 93 (437)
T 1n11_A 16 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKV--ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHT 93 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCC--CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCC--CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCH
Confidence 45666666666666666666666555444333 56666666666544 4455555555555666666666666666
Q ss_pred HHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHH
Q 014273 217 SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEV 292 (427)
Q Consensus 217 ~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~L 292 (427)
+++++|+ ++|++++.. +..|.||||+|+..|+.+++++|++.+ + .+..|.||||+|+..|+.+++++|
T Consensus 94 ~~v~~Ll-----~~ga~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 165 (437)
T 1n11_A 94 NMVKLLL-----ENNANPNLA---TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELL 165 (437)
T ss_dssp HHHHHHH-----HHTCCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHH-----hCCCCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6666665 455555554 444555555555555555555555544 1 233444444444444444444444
Q ss_pred HHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhC
Q 014273 293 LNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMT 351 (427)
Q Consensus 293 l~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~ 351 (427)
++++ +++|..+..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..+
T Consensus 166 l~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 223 (437)
T 1n11_A 166 LERD-AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 223 (437)
T ss_dssp HHTT-CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTT
T ss_pred HhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC
Confidence 4444 444444444444444444444444444444444444444444444444444443
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.5e-37 Score=303.42 Aligned_cols=274 Identities=17% Similarity=0.111 Sum_probs=171.3
Q ss_pred HHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcH
Q 014273 141 ELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVS 216 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~ 216 (427)
++||+|+..|..+++++|+++|++++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++.
T Consensus 49 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~ 126 (437)
T 1n11_A 49 TPLHMAARAGHTEVAKYLLQNKAKVNAKAKDD--QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 126 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTS--CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC--CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 45777777777777777777777777655444 77777777777765 5666677777777777777777777777
Q ss_pred HHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHH
Q 014273 217 SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEV 292 (427)
Q Consensus 217 ~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~L 292 (427)
++++.|+ +.+++++.. +..|.||||+|+..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|
T Consensus 127 ~~v~~Ll-----~~~~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 198 (437)
T 1n11_A 127 ETVLALL-----EKEASQACM---TKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198 (437)
T ss_dssp HHHHHHH-----HTTCCSCCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHH-----hCCCCCcCC---CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 7777776 556666555 556666777777666666666666666 2 244566666666666666666666
Q ss_pred HHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHh----------c
Q 014273 293 LNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASK----------Q 362 (427)
Q Consensus 293 l~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~----------~ 362 (427)
++++ ++++..+.+|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+...++.+.+ .
T Consensus 199 l~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 277 (437)
T 1n11_A 199 LPRG-GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKS 277 (437)
T ss_dssp GGGT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCC
Confidence 6666 6666666666666666666666666666666666666666666666666666664444443333 3
Q ss_pred CCCccchh---hhHHHHHHHHhc------cCCCCCcchhhhhccchhhhhHhhhc----------------------cch
Q 014273 363 GQETNKDW---LCIAFLEREIRR------NSMSGNLAMSADVMGDAFQMKLDYLE----------------------KKG 411 (427)
Q Consensus 363 g~~~~~~~---~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~e----------------------~r~ 411 (427)
|.||++.. ...++++..+.. ....|.++++.++..++..+..++++ ++.
T Consensus 278 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~ 357 (437)
T 1n11_A 278 GLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 357 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChH
Confidence 33444331 123333332221 11345556666655555544444333 356
Q ss_pred hHHHHHHhhhhhee
Q 014273 412 DIYFLVLVHCLLIV 425 (427)
Q Consensus 412 ~~~~~l~~~~~~~~ 425 (427)
+++++|+++|+++-
T Consensus 358 ~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 358 DIVTLLLKNGASPN 371 (437)
T ss_dssp HHHHHHHHTTCCSC
T ss_pred HHHHHHHHCcCCCC
Confidence 78888999888763
No 4
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.5e-37 Score=282.98 Aligned_cols=234 Identities=15% Similarity=0.019 Sum_probs=202.6
Q ss_pred HHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcH
Q 014273 141 ELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVS 216 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~ 216 (427)
++||+|+..|..+++++|+++|++++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++.
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWAVNIITADH--VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSW 82 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTC--CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 57999999999999999999999999776655 99999999999977 7888999999999999999999999999
Q ss_pred HHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHH
Q 014273 217 SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEV 292 (427)
Q Consensus 217 ~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~L 292 (427)
++++.|+ +.|++++.. ..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|
T Consensus 83 ~~v~~Ll-----~~g~~~~~~----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 83 DCVNLLL-----QHGASVQPE----SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp HHHHHHH-----HTTCCSSCS----CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHH-----HCCCCCCCC----CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 9999999 888988753 45999999999999999999999999 4 467899999999999999999999
Q ss_pred HHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccchhhh
Q 014273 293 LNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKDWLC 372 (427)
Q Consensus 293 l~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~ 372 (427)
++.| +++|. |..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+.. +..+..+.+.+..+.-...|
T Consensus 154 l~~g-~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~l~~~~ 229 (261)
T 2xai_A 154 LESG-ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPSLMQLC 229 (261)
T ss_dssp HHHT-CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCCHHHHH
T ss_pred HHcC-CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCccHHHHH
Confidence 9998 99995 89999999999999999999999999999999999999999999954 45777777777665533322
Q ss_pred HHHHHHHHhccCCCCCcchhhhh
Q 014273 373 IAFLEREIRRNSMSGNLAMSADV 395 (427)
Q Consensus 373 ~~~l~~~~~~~~~~~~~~~~~~~ 395 (427)
.-.+. ...|.++++.+.
T Consensus 230 ~~~~r------~~~g~t~l~~~~ 246 (261)
T 2xai_A 230 RLRIR------KCFGIQQHHKIT 246 (261)
T ss_dssp HHHHH------TTSCTTCGGGGG
T ss_pred HHHHH------HHhchhccccCc
Confidence 22221 245666666544
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.4e-36 Score=290.75 Aligned_cols=266 Identities=17% Similarity=0.065 Sum_probs=194.0
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++|+.|+..|..+++++|+++|+++|.++. ..|.||||+|+..|+.+ |+++|++++.++..+.++++.+...+.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~-~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEE-EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCC-CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 4679999999999999999999999997643 34699999999999977 778888888888888888888877777
Q ss_pred HHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC-------------CCCCchHHHHHH
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV-------------TLDDAFALHYAA 281 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~-------------d~~g~t~Lh~A~ 281 (427)
...+..++ ..+++++.. |..|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+
T Consensus 105 ~~~~~~~~-----~~~~~~~~~---d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 105 VKLLKLFL-----SKGADVNEC---DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp HHHHHHHH-----TTTCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred chhhHHhh-----hccchhhhh---ccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHH
Confidence 77777776 667777766 677788888888888888888888776 22 234677888888
Q ss_pred HcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCC-----
Q 014273 282 AYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE----PAVLETLLSKGACASETTSDGRTAVAICRRMTR----- 352 (427)
Q Consensus 282 ~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~----~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~----- 352 (427)
..|+.+++++||++.|+++|.+|..|+||||+++..+. .+++++|+++|+++|.+|..|+||||+|+..++
T Consensus 177 ~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~ 256 (337)
T 4g8k_A 177 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 256 (337)
T ss_dssp HHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH
T ss_pred HCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHH
Confidence 88888888888765447888888888888877765443 347777778888888777778888888777762
Q ss_pred ------CcchhHHHhcCCCccchh---hhHHHHHHHHhc--cCCCCCcchhhhhccchhhhhHhhhccchhHHHHHHhhh
Q 014273 353 ------RKDYIEASKQGQETNKDW---LCIAFLEREIRR--NSMSGNLAMSADVMGDAFQMKLDYLEKKGDIYFLVLVHC 421 (427)
Q Consensus 353 ------~~~i~~~~~~g~~~~~~~---~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~~~l~~~~ 421 (427)
+++++..+..|.||++.. ...++++..+.. ++.. ..+++.++. ..+.+++++|++||
T Consensus 257 ~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-~~~L~~A~~-----------~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 257 RLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-GDLVMTARR-----------NYDHSLVKVLLSHG 324 (337)
T ss_dssp HHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-CCHHHHHHH-----------TTCHHHHHHHHHTT
T ss_pred HHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCHHHHHHH-----------cCCHHHHHHHHHCc
Confidence 455555666667776552 235555553332 2222 224444433 34678899999999
Q ss_pred hheec
Q 014273 422 LLIVF 426 (427)
Q Consensus 422 ~~~~~ 426 (427)
+++-|
T Consensus 325 A~~d~ 329 (337)
T 4g8k_A 325 AKEDF 329 (337)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 98754
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.8e-37 Score=283.54 Aligned_cols=217 Identities=17% Similarity=0.100 Sum_probs=171.1
Q ss_pred hHHHHHHHHhcC-------------hHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCC
Q 014273 139 AVELIYACAAFQ-------------ITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSN 201 (427)
Q Consensus 139 ~~~lL~~A~~~~-------------~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~ 201 (427)
..++||+|+..| ..+++++|+++|.+++.. .+..|.||||+|+..|+.+ |+++|++++.++.
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 88 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEASADANIQDN 88 (253)
T ss_dssp ------------------------------------------C-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 346799998876 899999999999998754 2345699999999999977 7888999999999
Q ss_pred CCchHHhhhcChhcHHHHHHHHHhccccccc-CcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchH
Q 014273 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEA-NIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFA 276 (427)
Q Consensus 202 ~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga-~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~ 276 (427)
.|.||||+|+..++.+++++|+ +.|+ +++.. +..|.||||+|+..|+.+++++|++.| + .|..|+||
T Consensus 89 ~g~t~L~~A~~~~~~~~v~~Ll-----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 160 (253)
T 1yyh_A 89 MGRTPLHAAVSADAQGVFQILI-----RNRATDLDAR---MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA 160 (253)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHH-----HSTTSCTTCC---CTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBH
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-----HcCCCCcccc---CCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 9999999999999999999999 5565 77777 889999999999999999999999999 4 36789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcch
Q 014273 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDY 356 (427)
Q Consensus 277 Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i 356 (427)
||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.|+...+
T Consensus 161 L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhcCCC
Q 014273 357 IEASKQGQE 365 (427)
Q Consensus 357 ~~~~~~g~~ 365 (427)
..+......
T Consensus 240 ~~l~~~~~~ 248 (253)
T 1yyh_A 240 RLLDLEHHH 248 (253)
T ss_dssp HHHHC----
T ss_pred HHHHHHhhh
Confidence 888776544
No 7
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.9e-38 Score=289.10 Aligned_cols=204 Identities=22% Similarity=0.212 Sum_probs=166.9
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccccccc------CCCCCchhHHHHHHHcCcHH-----HHHhhhhhhccCCCCchHHh
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAEN------APVEDVIPILVAALHCQLNR-----LHSCCIQRIARSNLDNVCLE 208 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~------~~~~~~~t~L~~A~~~~~~~-----Ll~~g~~~~~~~~~g~t~L~ 208 (427)
.++|+.|+..|..+++++|++.+.+.... ..+..+.|||+.|+..+..+ |++.|++++.+|..|.||||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh 91 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLH 91 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 46799999999999999999998754211 12334689999999877643 88899999999999999999
Q ss_pred hhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcC
Q 014273 209 KELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYC 284 (427)
Q Consensus 209 ~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g 284 (427)
+|+..|+.+++++|+ +.|++++.. +..|.||+|+|+..++.+++++|++.| + .|..|+||||+|+..|
T Consensus 92 ~A~~~g~~~~v~~Ll-----~~~a~~~~~---~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 92 VAALHGRADLIPLLL-----KHGANAGAR---NADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp HHHHTTCTTHHHHHH-----HTTCCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred HHHHcCcHHHHHHHH-----hcCCCcCcc---CCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 999999999999999 889999988 889999999999999999999999999 4 4678999999999999
Q ss_pred CHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCC
Q 014273 285 NPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTR 352 (427)
Q Consensus 285 ~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~ 352 (427)
+.+++++||++| +|+|.+|..|+||||+|+..|+.++|++|+++|||+|.+|.+|+||||+|+++++
T Consensus 164 ~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 164 HHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp CGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 999999999998 9999999999999999999999999999999999999999999999999987664
No 8
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=282.11 Aligned_cols=248 Identities=15% Similarity=0.024 Sum_probs=193.2
Q ss_pred hhHHHHHHHHhcChHHHHHHHHHhc-----------ccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCC
Q 014273 138 YAVELIYACAAFQITELVSYFQCLL-----------LILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNL 202 (427)
Q Consensus 138 ~~~~lL~~A~~~~~~~l~~~ll~~g-----------~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~ 202 (427)
+..+++|+|+..|..+.+..++..+ ..++. .+.+|.||||+|+..|+.+ |++.|++++.++..
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~ 91 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMG--DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD 91 (285)
T ss_dssp ----------------------------CCSEECCCCTTCS--SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTT
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccC--CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 3457799999998865555443332 11222 3445699999999999977 77888899999999
Q ss_pred CchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C--CCCCCchHHHH
Q 014273 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E--VTLDDAFALHY 279 (427)
Q Consensus 203 g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~--~d~~g~t~Lh~ 279 (427)
|.||||+|+..++.+++++|+ +.|++++.. +..|.||||+|+..|+.+++++|++.| + .+..|.||||+
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll-----~~ga~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~ 163 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILL-----KHGAQVNGV---TADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHE 163 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHH-----HTTCCSSCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHH
T ss_pred CCCHHHHHHHCCcHHHHHHHH-----HCCCCCCCC---CCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHH
Confidence 999999999999999999999 789999988 889999999999999999999999999 3 35679999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHH
Q 014273 280 AAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEA 359 (427)
Q Consensus 280 A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~ 359 (427)
|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++. |..|+||||+|+..++...++.+
T Consensus 164 A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~L 241 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLL 241 (285)
T ss_dssp HHHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999998 99999999999999999999999999999999999995 89999999999999999999999
Q ss_pred HhcCCCccchhhhHHHHHHHHhccCCCCCcchhhhhccchhhhhHhhhccchhHHHHHHhh-hhhe
Q 014273 360 SKQGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEKKGDIYFLVLVH-CLLI 424 (427)
Q Consensus 360 ~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~~~l~~~-~~~~ 424 (427)
.+.|.++.. ....|.++++.+. .+.+++++|+++ |+++
T Consensus 242 l~~gad~~~--------------~d~~g~t~l~~A~-------------~~~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 242 MDFGADTQA--------------KNAEGKRPVELVP-------------PESPLAQLFLEREGASL 280 (285)
T ss_dssp HHTTCCTTC--------------CCTTSCCGGGGSC-------------TTSHHHHHHHHHC----
T ss_pred HHCCCCCCC--------------cCCCCCCHHHHhc-------------CccHHHHHHHHhhccCC
Confidence 998877542 2246777887775 235778888888 7765
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4.1e-36 Score=279.46 Aligned_cols=201 Identities=16% Similarity=0.093 Sum_probs=170.1
Q ss_pred HHHHHHHHhcChHHHHHHHHHhccc---ccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcC
Q 014273 140 VELIYACAAFQITELVSYFQCLLLI---LAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELP 212 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~---i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~ 212 (427)
.++||+|+..+..+++++|+++|.+ ++.++. .|.||||+|+..|+.+ |+++|++++.++..|.||||+|+.
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQND--LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACR 87 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCT--TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTT
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCC--CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3679999999999999999999988 665554 4599999999999977 888999999999999999999999
Q ss_pred hhcHHHHHHHHHhcccccccC-----------------------------------------------cccCCCCCccCc
Q 014273 213 DEVSSEIKSLRVKSNQESEAN-----------------------------------------------IKEVDPMHEKRV 245 (427)
Q Consensus 213 ~~~~~~~~~L~~~~~~~~ga~-----------------------------------------------~~~~~~~~~~g~ 245 (427)
.++.+++++|+ +.|++ ++.. +..|.
T Consensus 88 ~~~~~~v~~Ll-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~ 159 (282)
T 1oy3_D 88 VRAHTCACVLL-----QPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE---NYDGH 159 (282)
T ss_dssp TTCHHHHHHHS-----SSCCSSCCCC-----------------------------------CCCGGGGTTCC---CTTSC
T ss_pred cCCcchhHhhh-----ccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCc---CCCCc
Confidence 99999999998 44443 4444 88999
Q ss_pred hHHHHHHhcCCHHHHHHHHHcC-CC---C-CCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCH
Q 014273 246 RRIHKALDSDDFELLNLLLNEY-EV---T-LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEP 320 (427)
Q Consensus 246 t~Lh~A~~~~~~~~v~~Ll~~g-~~---d-~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~ 320 (427)
||||+|+..|+.+++++|+++| ++ + ..|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCc
Confidence 9999999999999999999999 44 3 34999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHhhC
Q 014273 321 AVLETLLSKGACASETTSDGRTAVAICRRMT 351 (427)
Q Consensus 321 ~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~ 351 (427)
+++++|+++||+++.+|..|.|||++|....
T Consensus 239 ~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 239 ILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHHHTTCCCCCCC--------------
T ss_pred HHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 9999999999999999999999999998765
No 10
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.6e-36 Score=272.22 Aligned_cols=203 Identities=15% Similarity=0.131 Sum_probs=188.5
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++||+|+..|..+++++|+++|++++..+..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 89 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ--RTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGH 89 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCC--CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 367999999999999999999999998776555 99999999999977 777888889999999999999999999
Q ss_pred HHHHHHHHHhcccccc-cCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHH
Q 014273 216 SSEIKSLRVKSNQESE-ANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFK 290 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~g-a~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~ 290 (427)
.+++++|+ +.| ++++.. +..|.||||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.++++
T Consensus 90 ~~~~~~Ll-----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 90 YEVVQYLL-----SNGQMDVNCQ---DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HHHHHHHH-----TTTCCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHHHHH-----hCCCCCcccC---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence 99999999 666 777777 789999999999999999999999999 4 3678999999999999999999
Q ss_pred HHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCC
Q 014273 291 EVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRR 353 (427)
Q Consensus 291 ~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~ 353 (427)
+|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.
T Consensus 162 ~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 162 ILLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp HHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHH
T ss_pred HHHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHH
Confidence 999998 99999999999999999999999999999999999999999999999999988754
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.9e-36 Score=271.62 Aligned_cols=213 Identities=19% Similarity=0.113 Sum_probs=193.9
Q ss_pred HHHHHHHhcChHHHHHHHHHhcccc-cccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 141 ELIYACAAFQITELVSYFQCLLLIL-AENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~~i-~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
++|+.|+..|..+.++++++.+... +.. +..+.||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLATRT--DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhhcC--CCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 4699999999999999999887553 433 345699999999999977 778888999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHH
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKE 291 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~ 291 (427)
.+++++|+ +.|++++.. +..|.||||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++
T Consensus 86 ~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 86 DEIVKALL-----VKGAHVNAV---NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp HHHHHHHH-----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHH-----HcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 99999999 889999888 889999999999999999999999999 3 46789999999999999999999
Q ss_pred HHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCC
Q 014273 292 VLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (427)
Q Consensus 292 Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~ 364 (427)
|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|.
T Consensus 158 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 158 LLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp HHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 99998 9999999999999999999999999999999999999999999999999998888777777776654
No 12
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.5e-36 Score=275.90 Aligned_cols=213 Identities=16% Similarity=0.111 Sum_probs=190.4
Q ss_pred HHHHHHHHhcChHHHHHHHHH----hcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhc
Q 014273 140 VELIYACAAFQITELVSYFQC----LLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKEL 211 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~----~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~ 211 (427)
.++||+|+..|..+++++|++ .+.+++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLR--QTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 87 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTS--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccC--CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 367999999999999999987 678888766555 99999999999977 77888999999999999999999
Q ss_pred ChhcHHHHHHHHHhccccccc----CcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---C-CCCchHHHHHHH
Q 014273 212 PDEVSSEIKSLRVKSNQESEA----NIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDAFALHYAAA 282 (427)
Q Consensus 212 ~~~~~~~~~~L~~~~~~~~ga----~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d-~~g~t~Lh~A~~ 282 (427)
..++.++++.|+ +.++ +++.. +..|.||||+|+..|+.+++++|++.| ++ + ..|.||||+|+.
T Consensus 88 ~~~~~~~~~~Ll-----~~~~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 88 EHRSPTCLRALL-----DSAAPGTLDLEAR---NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp HTTCHHHHHHHH-----HHSCTTSCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred HcCCHHHHHHHH-----HcCCCcccccccc---CcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHH
Confidence 999999999999 5555 66666 889999999999999999999999999 43 4 679999999999
Q ss_pred cCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhc
Q 014273 283 YCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQ 362 (427)
Q Consensus 283 ~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~ 362 (427)
.|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+..+
T Consensus 160 ~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 160 NNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp TTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred cCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 99999999999998 99999999999999999999999999999999999999999999999999998887777766655
Q ss_pred C
Q 014273 363 G 363 (427)
Q Consensus 363 g 363 (427)
+
T Consensus 239 ~ 239 (241)
T 1k1a_A 239 P 239 (241)
T ss_dssp -
T ss_pred C
Confidence 4
No 13
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-35 Score=275.39 Aligned_cols=221 Identities=18% Similarity=0.136 Sum_probs=204.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++||+|+..+..+++++|+++|++++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 40 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 117 (285)
T 1wdy_A 40 WTPLHNAVQMSREDIVELLLRHGADPVLRKKNG--ATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 117 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC
Confidence 357999999999999999999999998776555 99999999999977 778889999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCCCC-------CccCchHHHHHHhcCCHHHHHHHHHc-C-C---CCCCCchHHHHHHHc
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDPM-------HEKRVRRIHKALDSDDFELLNLLLNE-Y-E---VTLDDAFALHYAAAY 283 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~~-------~~~g~t~Lh~A~~~~~~~~v~~Ll~~-g-~---~d~~g~t~Lh~A~~~ 283 (427)
.+++++|+ +.|++++..... +..|.||||+|+..|+.+++++|++. | + .|..|+||||+|+..
T Consensus 118 ~~~~~~Ll-----~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 118 VKALKFLY-----KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp HHHHHHHH-----HTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred HHHHHHHH-----HhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 99999999 788888876432 67799999999999999999999997 6 3 467899999999999
Q ss_pred CC----HHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHhhCCCcchhH
Q 014273 284 CN----PKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLS-KGACASETTSDGRTAVAICRRMTRRKDYIE 358 (427)
Q Consensus 284 g~----~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~ 358 (427)
++ .+++++|++.| +++|.+|..|+||||+|+..|+.+++++|++ +|++++.+|..|+||||+|++.++...++.
T Consensus 193 ~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~ 271 (285)
T 1wdy_A 193 SDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271 (285)
T ss_dssp SCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHH
Confidence 99 89999999998 9999999999999999999999999999999 899999999999999999999999999999
Q ss_pred HHhcCCCccc
Q 014273 359 ASKQGQETNK 368 (427)
Q Consensus 359 ~~~~g~~~~~ 368 (427)
+.+.|.++..
T Consensus 272 Ll~~Ga~~~~ 281 (285)
T 1wdy_A 272 LCKRGASTDC 281 (285)
T ss_dssp HHHHSSCSCC
T ss_pred HHHcCCCCCc
Confidence 9999998764
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1e-35 Score=285.21 Aligned_cols=219 Identities=21% Similarity=0.126 Sum_probs=194.5
Q ss_pred hhHHHHHHHHhcChHHHHHHHHHh-cccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcC
Q 014273 138 YAVELIYACAAFQITELVSYFQCL-LLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELP 212 (427)
Q Consensus 138 ~~~~lL~~A~~~~~~~l~~~ll~~-g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~ 212 (427)
+..++|+.|+..|..+.++.++.. +.+++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+.
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 100 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRK--STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACS 100 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH
Confidence 345779999999999988777765 78887665554 99999999999977 778889999999999999999999
Q ss_pred hhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC----------------------
Q 014273 213 DEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---------------------- 269 (427)
Q Consensus 213 ~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---------------------- 269 (427)
.++.+++++|+ +.|++++.. +..|.||||+|+..|+.+++++|+++| ++
T Consensus 101 ~g~~~iv~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 101 YGHYEVTELLL-----KHGACVNAM---DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp TTCHHHHHHHH-----HTTCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHH
T ss_pred CCCHHHHHHHH-----HCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHH
Confidence 99999999999 889999988 789999999999999999999999988 32
Q ss_pred -----------------------------------CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCcHH
Q 014273 270 -----------------------------------TLDDAFALHYAAAY---CNPKVFKEVLNMGLADLNLKDARGRTVL 311 (427)
Q Consensus 270 -----------------------------------d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~advn~~d~~g~TpL 311 (427)
+..|.||||+|+.. +..+++++|++.| +++|.+|..|+|||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L 251 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTPL 251 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTCCCHH
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCCCCHH
Confidence 24578999999999 5589999999998 99999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 312 HVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 312 h~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
|+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+...++.+.+.|.++.
T Consensus 252 ~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 252 HVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999997777777777766544
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.2e-36 Score=288.83 Aligned_cols=222 Identities=13% Similarity=0.026 Sum_probs=196.0
Q ss_pred hHHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChh
Q 014273 139 AVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDE 214 (427)
Q Consensus 139 ~~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~ 214 (427)
..++||+|+..|..+++++|+++|++++.++..+ .||||+|+..|+.+ |+++|+++ .+..|.||||+|+..+
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFG--CTALHLACKFGCVDTAKYLASVGEVH--SLWHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHHCCHHHHHHHHHHCCCC--CCBTTBCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC--CcHHHHHHHcCCHHHHHHHHHCCCCc--cccCCCCHHHHHHHcC
Confidence 4588999999999999999999999999776655 99999999999988 55666644 3357999999999999
Q ss_pred cHHHHHHHHHhcccccccCccc--------------CCCCCccCchHHHHHHhcC--CHHHHHHHHHcC-C---CCCCCc
Q 014273 215 VSSEIKSLRVKSNQESEANIKE--------------VDPMHEKRVRRIHKALDSD--DFELLNLLLNEY-E---VTLDDA 274 (427)
Q Consensus 215 ~~~~~~~L~~~~~~~~ga~~~~--------------~~~~~~~g~t~Lh~A~~~~--~~~~v~~Ll~~g-~---~d~~g~ 274 (427)
+.+++++|+... .+.|++++. .+..+..|.||||+|+..| +.+++++|++.| + .|..|+
T Consensus 96 ~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 96 KTDLVVALVEGA-KERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp CHHHHHHHHHHH-HHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred CHHHHHHHHHhc-cccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 999999999431 011666665 0012778999999999999 999999999999 4 467899
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCC-----CcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHh
Q 014273 275 FALHYAAAYCNPKVFKEVLNMGLAD-----LNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRR 349 (427)
Q Consensus 275 t~Lh~A~~~g~~~~v~~Ll~~~~ad-----vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~ 349 (427)
||||+|+..|+.+++++|++.| ++ +|.+|..|+||||+|+..|+.+++++|+++|+|+|.+|..|+||||+|+.
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 253 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVR 253 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 9999999999999999999998 88 99999999999999999999999999999999999999999999999999
Q ss_pred hCCCcchhHHHhcCCCc
Q 014273 350 MTRRKDYIEASKQGQET 366 (427)
Q Consensus 350 ~~~~~~i~~~~~~g~~~ 366 (427)
.|+...++.+.+.|..+
T Consensus 254 ~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 254 AAMVLLTKELLQKTDVF 270 (364)
T ss_dssp TCCHHHHHHHHHHSCHH
T ss_pred hChHHHHHHHHHcCCch
Confidence 99999999999988764
No 16
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-36 Score=293.15 Aligned_cols=217 Identities=16% Similarity=0.125 Sum_probs=197.7
Q ss_pred hHHHHHHHHhcChHHHHHHHH--------HhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchH
Q 014273 139 AVELIYACAAFQITELVSYFQ--------CLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVC 206 (427)
Q Consensus 139 ~~~lL~~A~~~~~~~l~~~ll--------~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~ 206 (427)
..++||+|+..+..+++++|+ +.|+++|.++..+ .||||+|+..|+.+ |+++|++++.++..|.||
T Consensus 125 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g--~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDE--NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCC--CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 447899999999887766665 7899999776655 99999999999977 888899999999999999
Q ss_pred HhhhcChhcHHHHHHHHHhcccccc---cCcccCCCCCccCchHHHHHHhcC---CHHHHHHHHHcC-CCC---------
Q 014273 207 LEKELPDEVSSEIKSLRVKSNQESE---ANIKEVDPMHEKRVRRIHKALDSD---DFELLNLLLNEY-EVT--------- 270 (427)
Q Consensus 207 L~~a~~~~~~~~~~~L~~~~~~~~g---a~~~~~~~~~~~g~t~Lh~A~~~~---~~~~v~~Ll~~g-~~d--------- 270 (427)
||+|+..++.+++++|+ +.+ ++++.. +..|.||||+|+..+ +.+++++|+++| +++
T Consensus 203 L~~A~~~g~~~~v~~Ll-----~~~~~~~~~~~~---d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYML-----NSTKLKGDIEEL---DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp HHHHHHTTCHHHHHHHT-----TSHHHHHTTSCC---CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred HHHHHHCCCHHHHHHHH-----hcCccccChhhc---CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 99999999999999999 555 788887 889999999999998 899999999999 443
Q ss_pred --CCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 014273 271 --LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICR 348 (427)
Q Consensus 271 --~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~ 348 (427)
..|+||||+|+..|+.+++++|++.+++++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~ 354 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQ 354 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHH
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHH
Confidence 479999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCcchhHHHhcCCC
Q 014273 349 RMTRRKDYIEASKQGQE 365 (427)
Q Consensus 349 ~~~~~~~i~~~~~~g~~ 365 (427)
..|+...++.+.++|..
T Consensus 355 ~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 355 ANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HTTCHHHHHHHHTTC--
T ss_pred HcCCHHHHHHHHhcCcc
Confidence 99999999999988754
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=277.38 Aligned_cols=208 Identities=14% Similarity=0.026 Sum_probs=191.3
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++||+|+..|..+++++|+++|++++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~ 137 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADH--VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTC--CCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC--CCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCH
Confidence 367999999999999999999999999877665 99999999999977 778889999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHH
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKE 291 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~ 291 (427)
.+++++|+ +.|++++.. ..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++
T Consensus 138 ~~~v~~Ll-----~~g~~~~~~----~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 138 WDCVNLLL-----QHGASVQPE----SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHHHHH-----HTTCCSSCS----CTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHH-----HCCCCCCCC----CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99999999 778888754 35999999999999999999999999 4 46789999999999999999999
Q ss_pred HHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhc
Q 014273 292 VLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQ 362 (427)
Q Consensus 292 Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~ 362 (427)
|++.| +++|. |..|+||||+|+..|+.+++++|+++|+|++.+|..|+||||+|+ ++...++.+.+.
T Consensus 209 Ll~~g-a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 209 LLESG-ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp HHHTT-CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred HHHCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 99998 99995 899999999999999999999999999999999999999999999 456777777766
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.7e-35 Score=271.61 Aligned_cols=218 Identities=16% Similarity=0.094 Sum_probs=166.1
Q ss_pred cccccCCCCCchhHHHHHHHcC-------------cHH----HHHhhhhhhc-cCCCCchHHhhhcChhcHHHHHHHHHh
Q 014273 164 ILAENAPVEDVIPILVAALHCQ-------------LNR----LHSCCIQRIA-RSNLDNVCLEKELPDEVSSEIKSLRVK 225 (427)
Q Consensus 164 ~i~~~~~~~~~~t~L~~A~~~~-------------~~~----Ll~~g~~~~~-~~~~g~t~L~~a~~~~~~~~~~~L~~~ 225 (427)
|+|.++.. |.||||+|+..| ..+ |++.|.+++. .+..|.||||+|+..++.++++.|+
T Consensus 2 dvn~~d~~--g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-- 77 (253)
T 1yyh_A 2 DVNVRGPD--GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-- 77 (253)
T ss_dssp ----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH--
T ss_pred CCCCCCCC--CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHH--
Confidence 45655554 499999999987 444 7788888865 4889999999999999999999999
Q ss_pred cccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC--C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 014273 226 SNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADL 300 (427)
Q Consensus 226 ~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g--~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~adv 300 (427)
+.|++++.. +..|.||||+|+..|+.+++++|++.+ + .+..|.||||+|+..|+.+++++|++.| +++
T Consensus 78 ---~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~ 150 (253)
T 1yyh_A 78 ---EASADANIQ---DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADV 150 (253)
T ss_dssp ---HTTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCT
T ss_pred ---HcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCC
Confidence 889999988 889999999999999999999999998 2 3678999999999999999999999998 999
Q ss_pred cCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccchhhhHHHHHHHH
Q 014273 301 NLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKDWLCIAFLEREI 380 (427)
Q Consensus 301 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~~~~l~~~~ 380 (427)
|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|.++...
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~----------- 219 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT----------- 219 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-----------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc-----------
Confidence 999999999999999999999999999999999999999999999999999999999999988765421
Q ss_pred hccCCCCCcchhhhhccchhhhhHhh
Q 014273 381 RRNSMSGNLAMSADVMGDAFQMKLDY 406 (427)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (427)
...|.++++.+...+...+..++
T Consensus 220 ---d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 220 ---DHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp ---CTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ---ccCCCCHHHHHHHcCCHHHHHHH
Confidence 24577788877766655554433
No 19
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.5e-35 Score=266.26 Aligned_cols=208 Identities=18% Similarity=0.104 Sum_probs=188.0
Q ss_pred ChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHh
Q 014273 150 QITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVK 225 (427)
Q Consensus 150 ~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~ 225 (427)
|..+++++|+++|.+++.. .+.++.||||+|+..|+.+ |+++|++++.++..|.||||+|+..++.++++.|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-- 78 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI-- 78 (223)
T ss_dssp ---CCEETTEETTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH--
T ss_pred CcHHHHHHHHHcCCCcccc-cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH--
Confidence 4567788899999998765 2345699999999999977 77888999999999999999999999999999999
Q ss_pred ccccccc-CcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 014273 226 SNQESEA-NIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADL 300 (427)
Q Consensus 226 ~~~~~ga-~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~adv 300 (427)
+.++ +++.. +..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|+++| +++
T Consensus 79 ---~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~ 151 (223)
T 2f8y_A 79 ---RNRATDLDAR---MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANK 151 (223)
T ss_dssp ---HBTTSCTTCC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred ---HcCCCCcccC---CCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCC
Confidence 5555 67766 889999999999999999999999998 4 3678999999999999999999999998 999
Q ss_pred cCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 301 NLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 301 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.++...++.+.+.|....
T Consensus 152 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 152 DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999987543
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.9e-35 Score=264.38 Aligned_cols=201 Identities=16% Similarity=0.075 Sum_probs=182.6
Q ss_pred HHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhh--hhhhc-cCCCCchHHhhhcCh
Q 014273 141 ELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCC--IQRIA-RSNLDNVCLEKELPD 213 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g--~~~~~-~~~~g~t~L~~a~~~ 213 (427)
++||.|+..+..+++++|++.+.+.+.. .+..|.||||+|+..|+.+ |+++| .+++. ++..|.||||+|+..
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSLLLQ-KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCcccccc-CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 5799999999999999999999887652 3445699999999999977 66777 55555 788999999999999
Q ss_pred hcHHHHHHHHHhcccccc--cCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHH
Q 014273 214 EVSSEIKSLRVKSNQESE--ANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPK 287 (427)
Q Consensus 214 ~~~~~~~~L~~~~~~~~g--a~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~ 287 (427)
++.++++.|+ +.| ++++.. +..|.||||+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+
T Consensus 83 ~~~~~~~~Ll-----~~g~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 83 GNLEVVKSLY-----DRPLKPDLNKI---TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp CCHHHHHHHH-----SSSSCCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHH-----hCCCCcccccC---CcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 9999999999 777 777777 889999999999999999999999999 3 4678999999999999999
Q ss_pred HHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHhh
Q 014273 288 VFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLL-SKGACASETTSDGRTAVAICRRM 350 (427)
Q Consensus 288 ~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~Gadvn~~d~~g~tpL~~A~~~ 350 (427)
++++|++.|.+++|.+|..|+||||+|+..|+.+++++|+ ++|+|++.+|..|+||||+|+..
T Consensus 155 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 155 LIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 9999999988999999999999999999999999999999 89999999999999999999753
No 21
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=268.68 Aligned_cols=185 Identities=18% Similarity=0.097 Sum_probs=170.9
Q ss_pred CchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 173 DVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 173 ~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
+|.||||+|+..|+.+ |+++|++++.++..|.||||+|+..++.++++.|+ +.|++++.. +..|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L 73 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL-----KHGAQVNGV---TADWHTPL 73 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-----HTTCCTTCC---CTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-----HCCCCCCCC---CCCCCCHH
Confidence 3589999999999977 77888999999999999999999999999999999 889999988 88999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C--CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHH
Q 014273 249 HKALDSDDFELLNLLLNEY-E--VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLET 325 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~--~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~ 325 (427)
|+|+..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (261)
T 2xai_A 74 FNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKK 152 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHH
Confidence 9999999999999999999 3 4567999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 326 LLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 326 Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
|+++|+++|. +..|+||||+|+..++...++.+.+.|.++.
T Consensus 153 Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 153 LLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp HHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999995 8999999999999998777777777776644
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.2e-34 Score=261.10 Aligned_cols=211 Identities=16% Similarity=0.149 Sum_probs=190.5
Q ss_pred CCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccC
Q 014273 169 APVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKR 244 (427)
Q Consensus 169 ~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g 244 (427)
..+.+|.||||+|+..|+.+ |+++|++++..+..|.||||+|+..++.+++++|+ +.|++++.. +..|
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g 77 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI-----KAGALVDPK---DAEG 77 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-----TTTCCCCCC---CTTS
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHH-----hCCCCCCCC---CCCC
Confidence 34455699999999999977 77888999999999999999999999999999999 889999888 7899
Q ss_pred chHHHHHHhcCCHHHHHHHHHcC--C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCC
Q 014273 245 VRRIHKALDSDDFELLNLLLNEY--E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE 319 (427)
Q Consensus 245 ~t~Lh~A~~~~~~~~v~~Ll~~g--~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~ 319 (427)
.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..|+
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWAAFSGC 156 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCC
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHCCC
Confidence 99999999999999999999998 2 3678999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccchhhhHHHHHHHHhccCCCCCcchhhhhccch
Q 014273 320 PAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVMGDA 399 (427)
Q Consensus 320 ~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 399 (427)
.+++++|+++|++++.+|..|.||||+|++.++...++.+.+.|.++.. ....|.++++.+...++
T Consensus 157 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~--------------~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 157 VDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTL--------------KNKEGETPLQCASLNSQ 222 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC--------------CCTTSCCHHHHSCTTCH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc--------------cCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888876542 22567888888877766
Q ss_pred hhh
Q 014273 400 FQM 402 (427)
Q Consensus 400 ~~~ 402 (427)
...
T Consensus 223 ~~~ 225 (237)
T 3b7b_A 223 VWS 225 (237)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1e-34 Score=270.04 Aligned_cols=189 Identities=22% Similarity=0.180 Sum_probs=173.0
Q ss_pred CCCchhHHHHHHHcCcHH----HHHhhhh---hhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCcc
Q 014273 171 VEDVIPILVAALHCQLNR----LHSCCIQ---RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEK 243 (427)
Q Consensus 171 ~~~~~t~L~~A~~~~~~~----Ll~~g~~---~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~ 243 (427)
+.+|.||||+|+..|+.+ |+++|++ ++.++..|.||||+|+..++.+++++|+ +.|++++.. +..
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-----~~ga~~~~~---~~~ 77 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY-----AAGAGVLVA---ERG 77 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH-----HTTCCSSCC---CTT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHH-----HcCCCCCCC---CCC
Confidence 345699999999999977 6667776 7889999999999999999999999999 889999988 889
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcC-C--------------------------------------------------CCCC
Q 014273 244 RVRRIHKALDSDDFELLNLLLNEY-E--------------------------------------------------VTLD 272 (427)
Q Consensus 244 g~t~Lh~A~~~~~~~~v~~Ll~~g-~--------------------------------------------------~d~~ 272 (427)
|.||||+|+..|+.+++++|+++| . .|..
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 999999999999999999999876 1 2557
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhC
Q 014273 273 DAFALHYAAAYCNPKVFKEVLNMGLADLNLKDAR-GRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMT 351 (427)
Q Consensus 273 g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~-g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~ 351 (427)
|.||||+|+..|+.+++++|+++| +++|.++.. |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 158 g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236 (282)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSS
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcC
Confidence 999999999999999999999999 999999865 999999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHhcCCCccc
Q 014273 352 RRKDYIEASKQGQETNK 368 (427)
Q Consensus 352 ~~~~i~~~~~~g~~~~~ 368 (427)
+...++.+.+.|.++..
T Consensus 237 ~~~~v~~Ll~~ga~~~~ 253 (282)
T 1oy3_D 237 NPILARLLRAHGAPEPE 253 (282)
T ss_dssp CHHHHHHHHHTTCCCCC
T ss_pred CcHHHHHHHHcCCCcCc
Confidence 88888888888877653
No 24
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=8.5e-35 Score=271.87 Aligned_cols=205 Identities=11% Similarity=-0.004 Sum_probs=181.1
Q ss_pred hcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHH
Q 014273 148 AFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLR 223 (427)
Q Consensus 148 ~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~ 223 (427)
..+..++.++|.+. +++.++. .|.||||+|+..|+.+ |+++|++++.+ .|.||||+|+..++.+++++|+
T Consensus 9 ~~~~~~v~~lL~~~--~~~~~d~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll 82 (285)
T 3kea_A 9 TWKSKQLKSFLSSK--DTFKADV--HGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILL 82 (285)
T ss_dssp GCCHHHHHHHHHST--TTTCCCT--TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHH
T ss_pred hcCHHHHHHHHHhC--CCCccCC--CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHH
Confidence 34667788888776 4555544 4599999999999977 77888888887 4899999999999999999999
Q ss_pred HhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCC-chHHHHHHHcCCHHHHHHHHHcCCC
Q 014273 224 VKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDD-AFALHYAAAYCNPKVFKEVLNMGLA 298 (427)
Q Consensus 224 ~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g-~t~Lh~A~~~g~~~~v~~Ll~~~~a 298 (427)
+.|++++.. +..|.||||+|+..|+.+++++|+++| + .|..| .||||+|+..|+.+++++|+++| +
T Consensus 83 -----~~ga~~~~~---d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~ 153 (285)
T 3kea_A 83 -----FSGLDDSQF---DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-P 153 (285)
T ss_dssp -----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS-C
T ss_pred -----HCCCCCCCc---CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC-C
Confidence 889999988 889999999999999999999999999 3 46678 79999999999999999999998 7
Q ss_pred CCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH-HHHHHhhCCCcchhHHHhcCCCccc
Q 014273 299 DLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTA-VAICRRMTRRKDYIEASKQGQETNK 368 (427)
Q Consensus 299 dvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tp-L~~A~~~~~~~~i~~~~~~g~~~~~ 368 (427)
++... ..|+||||+|+..|+.+++++|+++|+++|.+|..|+|| ||+|+..++...++.+.+.|.++..
T Consensus 154 ~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 154 STFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp TTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred ccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 66322 289999999999999999999999999999999999998 9999999999999999999988764
No 25
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-35 Score=275.73 Aligned_cols=199 Identities=20% Similarity=0.069 Sum_probs=184.4
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++|+.|+..|..+++++|+++|++++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~ 118 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDG--LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTC--CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Confidence 467999999999999999999999999776655 99999999999977 788899999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC--C-------------------------
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--E------------------------- 268 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g--~------------------------- 268 (427)
.+++++|+ +.|++++.. +..|.||||+|+..++.++++.++... +
T Consensus 119 ~~~v~~Ll-----~~g~~~~~~---~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 119 LDIAEYLI-----SQGAHVGAV---NSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHHH-----HTTCCTTCC---CTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHH-----hCCCCCCCc---CCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 99999999 889999988 889999999999999999998877542 1
Q ss_pred ----CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Q 014273 269 ----VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAV 344 (427)
Q Consensus 269 ----~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL 344 (427)
.+..|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|+|||
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 269 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 2467999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 014273 345 AICRR 349 (427)
Q Consensus 345 ~~A~~ 349 (427)
|+|+.
T Consensus 270 ~~A~~ 274 (299)
T 1s70_B 270 DVADE 274 (299)
T ss_dssp TSCCS
T ss_pred HHHHH
Confidence 99965
No 26
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=258.88 Aligned_cols=216 Identities=16% Similarity=0.078 Sum_probs=194.3
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccC-CCCchHHhhhcChh
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARS-NLDNVCLEKELPDE 214 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~-~~g~t~L~~a~~~~ 214 (427)
.++|+.|+..|..+++++|++.|++++.++.. +.||||+|+..|+.+ |++++.+++... ..|.||||+|+..+
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVRQPDKE--NVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTT--SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcCCCCCC--CCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 35699999999999999999999999877655 499999999999987 666777766544 45999999999999
Q ss_pred cHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCC-HHHH
Q 014273 215 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCN-PKVF 289 (427)
Q Consensus 215 ~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~-~~~v 289 (427)
+.++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|+++| + .+..|.||||+|+..++ .+++
T Consensus 88 ~~~~v~~Ll-----~~g~~~~~~---~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 88 HLSMVVQLM-----KYGADPSLI---DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp CHHHHHHHH-----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred CHHHHHHHH-----HcCCCCccc---CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHH
Confidence 999999999 789999988 889999999999999999999999998 3 46789999999997766 8899
Q ss_pred HHHHHcCCCCCcCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCc
Q 014273 290 KEVLNMGLADLNLKDA-RGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (427)
Q Consensus 290 ~~Ll~~~~advn~~d~-~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~ 366 (427)
++|++.+ ++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.++...++.+.+.|...
T Consensus 160 ~~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 160 RLLLTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 9999998 99999997 9999999999999999999999999999999999999999999999999999999887653
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-33 Score=254.96 Aligned_cols=217 Identities=15% Similarity=0.079 Sum_probs=192.6
Q ss_pred chhHHHHHHHcCcHHHHH----hh-hhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 174 VIPILVAALHCQLNRLHS----CC-IQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~Ll~----~g-~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
+.+||+.|+..|+.+.++ .+ ..++.++..|.||||+|+..++.++++.|+ +.|++++.. +..|.|||
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L 77 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL-----QLGVPVNDK---DDAGWSPL 77 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH-----HTTCCSCCC---CTTSCCHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHH-----HhCCCCCCc---CCCCCCHH
Confidence 479999999999987443 33 335677899999999999999999999999 789999888 88999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHH
Q 014273 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~ 324 (427)
|+|+..|+.+++++|+++| + .|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 9999999999999999999 3 4678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccchhhhHHHHHHHHhccCCCCCcchhhhhccchhhhhH
Q 014273 325 TLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKL 404 (427)
Q Consensus 325 ~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (427)
+|+++|++++.+|..|+||||+|+..++...++.+.+.|.++... ...|.++++.+...
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~--------------~~~g~t~l~~A~~~------- 215 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIE--------------NKEEKTPLQVAKGG------- 215 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC--------------CTTSCCHHHHSCHH-------
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC--------------CCCCCCHHHHHHhh-------
Confidence 999999999999999999999999999999999999999876532 24577788777443
Q ss_pred hhhccchhHHHHHHhhhhhe
Q 014273 405 DYLEKKGDIYFLVLVHCLLI 424 (427)
Q Consensus 405 ~~~e~r~~~~~~l~~~~~~~ 424 (427)
+..++.++|.++|++|
T Consensus 216 ----~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 216 ----LGLILKRLAEGEEASM 231 (231)
T ss_dssp ----HHHHHHHHHHHHHHCC
T ss_pred ----HHHHHHHHHccccccC
Confidence 3567788999998875
No 28
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7.1e-34 Score=272.44 Aligned_cols=211 Identities=19% Similarity=0.087 Sum_probs=188.8
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++||+|+..+..+++++|+++|++++.++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGG--LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC--CcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 467999999999999999999999999776655 99999999999977 788899999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCC---------------------------------------------------CCCccC
Q 014273 216 SSEIKSLRVKSNQESEANIKEVD---------------------------------------------------PMHEKR 244 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~---------------------------------------------------~~~~~g 244 (427)
.+++++|+ +.|++++..+ ..+..|
T Consensus 137 ~~~v~~Ll-----~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 211 (351)
T 3utm_A 137 VEVCSLLL-----SHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSH 211 (351)
T ss_dssp HHHHHHHH-----HTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTC
T ss_pred HHHHHHHH-----HcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCC
Confidence 99999999 7788887653 124668
Q ss_pred chHHHHHHhc---CCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHc
Q 014273 245 VRRIHKALDS---DDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARR 317 (427)
Q Consensus 245 ~t~Lh~A~~~---~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~ 317 (427)
.||||+|+.. ++.+++++|++.| + .|..|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..
T Consensus 212 ~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~~~ 290 (351)
T 3utm_A 212 ETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALHRAALA 290 (351)
T ss_dssp CCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHc
Confidence 8999999999 5589999999999 4 4678999999999999999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhc
Q 014273 318 KEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQ 362 (427)
Q Consensus 318 g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~ 362 (427)
|+.+++++|+++|+|++.+|..|+||+++|. ...++.+.+.
T Consensus 291 ~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~----~~~~~~l~~~ 331 (351)
T 3utm_A 291 GHLQTCRLLLSYGSDPSIISLQGFTAAQMGN----EAVQQILSES 331 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC----HHHHHHHHHC
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCChhhhhh----HHHHHHHHhc
Confidence 9999999999999999999999999999983 3344444443
No 29
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.9e-35 Score=283.03 Aligned_cols=246 Identities=15% Similarity=0.095 Sum_probs=209.8
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----H--------HHhhhhhhccCCCCchHH
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----L--------HSCCIQRIARSNLDNVCL 207 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----L--------l~~g~~~~~~~~~g~t~L 207 (427)
.++||+|+..+. +++++++. .+++.++ ...|.||||+|+..|+.+ | ++.|++++.+|..|.|||
T Consensus 95 ~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d-~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL 170 (373)
T 2fo1_E 95 PIKLHTEAAGSY-AITEPITR--ESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPL 170 (373)
T ss_dssp CCHHHHHHHSSS-CCCSCCST--TTTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHH
T ss_pred ccHHHHHhcCCc-hHHHHhcc--ccccccC-CcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHH
Confidence 357999999664 67777655 3555444 134699999999999854 3 478999999999999999
Q ss_pred hhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-------CCCCCCchHHHHH
Q 014273 208 EKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-------EVTLDDAFALHYA 280 (427)
Q Consensus 208 ~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-------~~d~~g~t~Lh~A 280 (427)
|+|+..++.+++++|+ +.|++++.. +..|.||||+|+..|+.+++++|++++ ..|..|.||||+|
T Consensus 171 ~~A~~~g~~~iv~~Ll-----~~ga~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 171 MLAVLARRRRLVAYLM-----KAGADPTIY---NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 242 (373)
T ss_dssp HHHHHHTCHHHHHHHH-----HTTCCSCCC---CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred HHHHHcChHHHHHHHH-----HCCCCCccc---CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH
Confidence 9999999999999999 889999988 889999999999999999999999876 2478899999999
Q ss_pred HHcC---CHHHHHHHHHcCCCCCcC--------CCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHH
Q 014273 281 AAYC---NPKVFKEVLNMGLADLNL--------KDARGRTVLHVAARRKEPAVLETLLSKG-ACASETTSDGRTAVAICR 348 (427)
Q Consensus 281 ~~~g---~~~~v~~Ll~~~~advn~--------~d~~g~TpLh~A~~~g~~~~v~~Ll~~G-advn~~d~~g~tpL~~A~ 348 (427)
+..+ +.+++++|++.| ++++. .|..|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~ 321 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred HHhCCcchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHH
Confidence 9998 899999999999 99986 6779999999999999999999999875 999999999999999999
Q ss_pred hhCCCcchhHHHhcCCCccchhhhHHHHHHHHhccCCCCCcchhhhhccchhhhhHhhhccchhHHHHHHhhhhh
Q 014273 349 RMTRRKDYIEASKQGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEKKGDIYFLVLVHCLL 423 (427)
Q Consensus 349 ~~~~~~~i~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~~~l~~~~~~ 423 (427)
..|+...++.+.+.|..+... ...|.++++.+...+ +.+++++|+++|.+
T Consensus 322 ~~g~~~iv~~Ll~~gad~~~~--------------d~~g~t~l~~A~~~g-----------~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 322 QEGRIEVVMYLIQQGASVEAV--------------DATDHTARQLAQANN-----------HHNIVDIFDRCRPE 371 (373)
T ss_dssp HHTCHHHHHHHHHTTCCSSCC--------------CSSSCCHHHHHHHTT-----------CHHHHHHHHTTC--
T ss_pred HcCCHHHHHHHHHcCCCccCC--------------CCCCCCHHHHHHHcC-----------CHHHHHHHHhcCcc
Confidence 999999999999999876532 245778888876554 55667777777754
No 30
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.7e-34 Score=257.95 Aligned_cols=208 Identities=18% Similarity=0.121 Sum_probs=184.6
Q ss_pred CCCchhHHHHHHHcCcHH----HHH----hhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCc
Q 014273 171 VEDVIPILVAALHCQLNR----LHS----CCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHE 242 (427)
Q Consensus 171 ~~~~~t~L~~A~~~~~~~----Ll~----~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~ 242 (427)
+.+|.||||+|+..|+.+ |++ .+.+++.++..|.||||+|+..++.+++++|+ +.|++++.. +.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~ 77 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV-----TAGASPMAL---DR 77 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHH-----HcCCCcccc---CC
Confidence 345699999999999977 443 56788899999999999999999999999999 889999988 88
Q ss_pred cCchHHHHHHhcCCHHHHHHHHHcCC--------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCcHHHH
Q 014273 243 KRVRRIHKALDSDDFELLNLLLNEYE--------VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKD-ARGRTVLHV 313 (427)
Q Consensus 243 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~--------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d-~~g~TpLh~ 313 (427)
.|.||||+|+..|+.+++++|++.+. .|..|.||||+|+..|+.+++++|++.| ++++..+ ..|+||||+
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHH
Confidence 99999999999999999999999872 2568999999999999999999999998 9999999 899999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccchhhhHHHHHHHHhccCCCCCcchhh
Q 014273 314 AARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKDWLCIAFLEREIRRNSMSGNLAMSA 393 (427)
Q Consensus 314 A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 393 (427)
|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|.++.. ....|.++++.
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--------------~~~~g~tpl~~ 222 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL--------------KNCHNDTPLMV 222 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC--------------CCTTSCCTTTT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC--------------cCCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999998877542 22457778887
Q ss_pred hhccchhh
Q 014273 394 DVMGDAFQ 401 (427)
Q Consensus 394 ~~~~~~~~ 401 (427)
+...+...
T Consensus 223 A~~~~~~~ 230 (241)
T 1k1a_A 223 ARSRRVID 230 (241)
T ss_dssp CSSHHHHH
T ss_pred HHhcCcHH
Confidence 76554333
No 31
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.6e-34 Score=271.34 Aligned_cols=221 Identities=18% Similarity=0.143 Sum_probs=197.5
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++||+|+..+..+++++|+++|++++.++..+ .++++.+...+... +++.+.+++.++..|.||||+|+..+.
T Consensus 60 ~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~ 137 (337)
T 4g8k_A 60 WTPLHNAVQMSREDIVELLLRHGADPVLRKKNG--ATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 137 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCchhhhccCC--CchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCc
Confidence 468999999999999999999999999776655 99999999999866 777889999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCCC-------CCccCchHHHHHHhcCCHHHHHHHHHc-C-C---CCCCCchHHHHHHHc
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDP-------MHEKRVRRIHKALDSDDFELLNLLLNE-Y-E---VTLDDAFALHYAAAY 283 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~-------~~~~g~t~Lh~A~~~~~~~~v~~Ll~~-g-~---~d~~g~t~Lh~A~~~ 283 (427)
.++++.++ +.|++++.... .+..|.||||+|++.|+.+++++|+++ | + .|..|.||||+++..
T Consensus 138 ~~~~~~ll-----~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~ 212 (337)
T 4g8k_A 138 VKALKFLY-----KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 212 (337)
T ss_dssp HHHHHHHH-----HTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHH-----HcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHH
Confidence 99999999 78888876432 356799999999999999999999975 6 4 467899999988775
Q ss_pred CC----HHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHhhCCCcchhH
Q 014273 284 CN----PKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSK-GACASETTSDGRTAVAICRRMTRRKDYIE 358 (427)
Q Consensus 284 g~----~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-Gadvn~~d~~g~tpL~~A~~~~~~~~i~~ 358 (427)
+. ..++++|+++| +++|.+|..|+||||+|+..|+.+++++|++. |+++|.+|.+|+||||+|++.|+...++.
T Consensus 213 ~~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~ 291 (337)
T 4g8k_A 213 SDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 291 (337)
T ss_dssp SCTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred cCcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 54 35788999998 99999999999999999999999999999985 89999999999999999999999999999
Q ss_pred HHhcCCCccc
Q 014273 359 ASKQGQETNK 368 (427)
Q Consensus 359 ~~~~g~~~~~ 368 (427)
+.+.|.++..
T Consensus 292 Ll~~GAd~n~ 301 (337)
T 4g8k_A 292 LCKRGASTDC 301 (337)
T ss_dssp HHTTSCSSTT
T ss_pred HHHCCCCCCC
Confidence 9999987653
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.6e-34 Score=268.53 Aligned_cols=206 Identities=11% Similarity=-0.011 Sum_probs=187.6
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
.++||+|+..+..+++++|+++|++++.+ +|.||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN 107 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC
Confidence 36799999999999999999999999866 2599999999999866 888999999999999999999999999
Q ss_pred HHHHHHHHHhcccccccCcccCCCCCccC-chHHHHHHhcCCHHHHHHHHHcC-CC-CC-CCchHHHHHHHcCCHHHHHH
Q 014273 216 SSEIKSLRVKSNQESEANIKEVDPMHEKR-VRRIHKALDSDDFELLNLLLNEY-EV-TL-DDAFALHYAAAYCNPKVFKE 291 (427)
Q Consensus 216 ~~~~~~L~~~~~~~~ga~~~~~~~~~~~g-~t~Lh~A~~~~~~~~v~~Ll~~g-~~-d~-~g~t~Lh~A~~~g~~~~v~~ 291 (427)
.+++++|+ +.|++++.. +..| .||||+|+..|+.+++++|+++| +. +. .|+||||+|+..|+.+++++
T Consensus 108 ~~~v~~Ll-----~~ga~~~~~---~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 108 MQTVKLFV-----KKNWRLMFY---GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp HHHHHHHH-----HHCGGGGGC---SSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHH-----hcCCCCCcc---CCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHH
Confidence 99999999 889999988 7788 89999999999999999999999 32 44 89999999999999999999
Q ss_pred HHHcCCCCCcCCCCCCCcH-HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCC
Q 014273 292 VLNMGLADLNLKDARGRTV-LHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQE 365 (427)
Q Consensus 292 Ll~~~~advn~~d~~g~Tp-Lh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~ 365 (427)
|+++| +++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..++...++.+.+.|.+
T Consensus 180 Ll~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 180 LLDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp HHHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHH
T ss_pred HHHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCC
Confidence 99998 9999999999998 9999999999999999999999999883 55667777777777776643
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.9e-34 Score=275.37 Aligned_cols=219 Identities=12% Similarity=0.076 Sum_probs=193.4
Q ss_pred CCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCc
Q 014273 170 PVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRV 245 (427)
Q Consensus 170 ~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~ 245 (427)
.+.+|.||||+|+..|+.+ |+++|++++.++..|.||||+|+..++.+++++|+ +.|++++. ..|.
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-----~~g~~~~~-----~~g~ 85 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLA-----SVGEVHSL-----WHGQ 85 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHH-----HHCCCCCC-----BTTB
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHH-----HCCCCccc-----cCCC
Confidence 3445699999999999977 77888999999999999999999999999999999 77875553 4799
Q ss_pred hHHHHHHhcCCHHHHHHHHHc----C-C--------------------CCCCCchHHHHHHHcC--CHHHHHHHHHcCCC
Q 014273 246 RRIHKALDSDDFELLNLLLNE----Y-E--------------------VTLDDAFALHYAAAYC--NPKVFKEVLNMGLA 298 (427)
Q Consensus 246 t~Lh~A~~~~~~~~v~~Ll~~----g-~--------------------~d~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~a 298 (427)
||||+|+..|+.+++++|++. | + .|..|.||||+|+..| +.+++++|++.| +
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a 164 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-A 164 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-C
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-C
Confidence 999999999999999999998 4 2 3457999999999999 999999999998 9
Q ss_pred CCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccchhhhH
Q 014273 299 DLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC-----ASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKDWLCI 373 (427)
Q Consensus 299 dvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gad-----vn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~~ 373 (427)
++|.+|..|+||||+|+..|+.+++++|+++|++ +|.+|..|+||||+|+..|+...++.+.+.|..+...
T Consensus 165 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~---- 240 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNME---- 240 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCC----
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC----
Confidence 9999999999999999999999999999999999 9999999999999999999999999999999876532
Q ss_pred HHHHHHHhccCCCCCcchhhhhccchhhhhHhhhccchhHHHHHHhhhhhe
Q 014273 374 AFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEKKGDIYFLVLVHCLLI 424 (427)
Q Consensus 374 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~~~l~~~~~~~ 424 (427)
...|.++++.++..+ +.+++++|+++|.++
T Consensus 241 ----------d~~g~tpL~~A~~~g-----------~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 241 ----------DNEHTVPLYLSVRAA-----------MVLLTKELLQKTDVF 270 (364)
T ss_dssp ----------CTTSCCHHHHHHHTC-----------CHHHHHHHHHHSCHH
T ss_pred ----------CCCCCCHHHHHHHhC-----------hHHHHHHHHHcCCch
Confidence 256788888887654 556677777777653
No 34
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.9e-33 Score=254.14 Aligned_cols=188 Identities=16% Similarity=0.134 Sum_probs=167.5
Q ss_pred chhHHHHHHHcCcHH----HHHh-hhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccC--CCCCccCch
Q 014273 174 VIPILVAALHCQLNR----LHSC-CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEV--DPMHEKRVR 246 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll~~-g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~--~~~~~~g~t 246 (427)
|.||||+|+..|+.+ |++. |++++.++..|.||||+|+..++.+++++|+ +.|+++... +..+..|.|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-----~~~~~~~~~~~~~~~~~g~t 77 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLM-----EAAPELVFEPMTSELYEGQT 77 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HHCGGGGGCCCCSTTTTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH-----HcCchhccccccccCCCCcC
Confidence 589999999999877 5555 8888999999999999999999999999999 667776322 223778999
Q ss_pred HHHHHHhcCCHHHHHHHHHcC-CCCC----------------CCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCc
Q 014273 247 RIHKALDSDDFELLNLLLNEY-EVTL----------------DDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRT 309 (427)
Q Consensus 247 ~Lh~A~~~~~~~~v~~Ll~~g-~~d~----------------~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~T 309 (427)
|||+|+..|+.+++++|+++| +++. .|+||||+|+..|+.+++++|+++| +++|.+|..|+|
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t 156 (232)
T 2rfa_A 78 ALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSLGNT 156 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCC
Confidence 999999999999999999999 4332 6999999999999999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHH----HHHHhCCCCC------CCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 310 VLHVAARRKEPAVL----ETLLSKGACA------SETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 310 pLh~A~~~g~~~~v----~~Ll~~Gadv------n~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
|||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|++.|+...++.+.++|..+.
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccch
Confidence 99999999999988 9999999998 6899999999999999999999999998875543
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1e-32 Score=248.50 Aligned_cols=203 Identities=17% Similarity=0.063 Sum_probs=177.3
Q ss_pred chhHHHHHHHcCcHH----HHHhhhhhhc-cCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 174 VIPILVAALHCQLNR----LHSCCIQRIA-RSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll~~g~~~~~-~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
|.||||+|+..|+.+ |++.+.+... ++..|.||||+|+..++.++++.|+ +.|++++.....+..|.|||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~~~~~~~~~~~~~~g~t~L 76 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLL-----SKMENVNLDDYPDDSGWTPF 76 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTCTTCCGGGCCCTTSCCHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHH-----hccccccccccCCCCCCCHH
Confidence 479999999999977 5666666554 8899999999999999999999999 77855544332488999999
Q ss_pred HHHHhcCCHHHHHHHHHcC---C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHH
Q 014273 249 HKALDSDDFELLNLLLNEY---E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAV 322 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g---~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~ 322 (427)
|+|+..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (228)
T 2dzn_A 77 HIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKL 155 (228)
T ss_dssp HHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999987 2 3678999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHhCC-CCCCCCCCCCCCHHHHHHhhCCCcchhHHH-hcCCCccchhhhHHHHHHHHhccCCCCCcchhhhhc
Q 014273 323 LETLLSKG-ACASETTSDGRTAVAICRRMTRRKDYIEAS-KQGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVM 396 (427)
Q Consensus 323 v~~Ll~~G-advn~~d~~g~tpL~~A~~~~~~~~i~~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 396 (427)
+++|+++| +++|.+|..|+||||+|+..++...++.+. +.|.++.... ..|.++++.+..
T Consensus 156 v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~--------------~~g~t~l~~A~~ 217 (228)
T 2dzn_A 156 IELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD--------------NKGAKAEDVALN 217 (228)
T ss_dssp HHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC--------------TTSCBGGGGCSS
T ss_pred HHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccC--------------CCCCcHHHHHHH
Confidence 99999999 999999999999999999999999999888 7787765322 456777777743
No 36
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.8e-33 Score=238.95 Aligned_cols=155 Identities=29% Similarity=0.360 Sum_probs=143.9
Q ss_pred hHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHH
Q 014273 205 VCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYA 280 (427)
Q Consensus 205 t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A 280 (427)
++|+.|+..|+.++++.|+ +.|+++|.. |..|.||||+|+..++.+++++|++.| + .|..|+||||+|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll-----~~Gadvn~~---d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A 77 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI-----ENGADVNAS---DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA 77 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHH-----HCCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHH
Confidence 4799999999999999999 889999988 889999999999999999999999999 4 467899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHH
Q 014273 281 AAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEAS 360 (427)
Q Consensus 281 ~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~ 360 (427)
+..|+.+++++|+++| +|+|.+|.+|+||||+|+..|+.+++++|+++|+|++.+|.+|+||||+|++.|+...++.+.
T Consensus 78 ~~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 78 AENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccc
Q 014273 361 KQGQETNK 368 (427)
Q Consensus 361 ~~g~~~~~ 368 (427)
+.|...-+
T Consensus 157 ~~GA~ie~ 164 (169)
T 4gpm_A 157 KQGGWLEH 164 (169)
T ss_dssp TC------
T ss_pred HCCCCcCC
Confidence 99987543
No 37
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.4e-33 Score=244.53 Aligned_cols=182 Identities=19% Similarity=0.107 Sum_probs=168.1
Q ss_pred chhHHHHHHHcCcHH----HHHhhh-hhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 174 VIPILVAALHCQLNR----LHSCCI-QRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll~~g~-~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
+.|||+.|+..|..+ |++.+. +++.++..|.||||+|+..++.+++++|+ +.|++++.. +..|.|||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~l 76 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALI-----DRGADINLQ---NSISDSPY 76 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-----HTTCCTTCC---CTTSCCHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-----HcCCCCCCC---CCCCCCHH
Confidence 489999999999977 444444 88889999999999999999999999999 889999988 88999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-----CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCC----
Q 014273 249 HKALDSDDFELLNLLLNEY-----EVTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE---- 319 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-----~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~---- 319 (427)
|+|+..|+.+++++|++.+ ..|..|.||||+|+..|+.+++++|++.+++++|.+|..|+||||+|+..++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 9999999999999999655 2467899999999999999999999999989999999999999999999998
Q ss_pred -HHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcC
Q 014273 320 -PAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQG 363 (427)
Q Consensus 320 -~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g 363 (427)
.+++++|+++|++++.+|..|+||||+|+..|+...++.+.++|
T Consensus 157 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 157 YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999999999999988876
No 38
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-33 Score=257.52 Aligned_cols=186 Identities=19% Similarity=0.099 Sum_probs=141.7
Q ss_pred CchhHHHHHHHcCcHHHHHhh----hh--------hhccCCCCchHHhhhcChhcHH-HHHHHHHhcccccccCcccCCC
Q 014273 173 DVIPILVAALHCQLNRLHSCC----IQ--------RIARSNLDNVCLEKELPDEVSS-EIKSLRVKSNQESEANIKEVDP 239 (427)
Q Consensus 173 ~~~t~L~~A~~~~~~~Ll~~g----~~--------~~~~~~~g~t~L~~a~~~~~~~-~~~~L~~~~~~~~ga~~~~~~~ 239 (427)
.+.++|+.|+..|+.++++.. .+ ++..+..+.|||+.|+..+..+ +++.|+ +.|+++|..
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll-----~~Gadvn~~-- 82 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVP-----ASGLGVNVT-- 82 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------CCCCTTCC--
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHH-----HCCCCCCCc--
Confidence 358999999999998855444 32 4556678999999999877654 667777 889999988
Q ss_pred CCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHH
Q 014273 240 MHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAA 315 (427)
Q Consensus 240 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~ 315 (427)
|.+|.||||+|+..|+.+++++|++.| + .+..|.||+|+|+..++.+++++|++.| +++|.+|..|+||||+|+
T Consensus 83 -d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~ 160 (269)
T 4b93_B 83 -SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYAC 160 (269)
T ss_dssp -CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHHH
T ss_pred -CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHHH
Confidence 889999999999999999999999999 3 4678999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 316 RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 316 ~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
..|+.+++++|+++|+|+|.+|..|+||||+|+..|+...++.+.+.|.++.
T Consensus 161 ~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 161 SGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp HTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999999999999999999999999999999997777777777766544
No 39
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.3e-34 Score=258.72 Aligned_cols=188 Identities=17% Similarity=0.162 Sum_probs=171.1
Q ss_pred CCCchhHHHHHHHcCcHH----HHHhhh----hhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCc
Q 014273 171 VEDVIPILVAALHCQLNR----LHSCCI----QRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHE 242 (427)
Q Consensus 171 ~~~~~t~L~~A~~~~~~~----Ll~~g~----~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~ 242 (427)
+.+|.||||+|+..|+.+ |++.+. +++.++..|.||||+|+..++.+++++|+ +.|++++.. +.
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~ 76 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALL-----GAGCDPELR---DF 76 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCC-----SCCCCSCCC---CT
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHH-----HcCCCCCCc---CC
Confidence 345699999999999876 444443 68889999999999999999999999998 889999988 88
Q ss_pred cCchHHHHHHhcCCHHHHHHHHHcC-C---------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCcHH
Q 014273 243 KRVRRIHKALDSDDFELLNLLLNEY-E---------VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDA-RGRTVL 311 (427)
Q Consensus 243 ~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---------~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~-~g~TpL 311 (427)
.|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|+++| +++|.++. .|+|||
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~tpL 155 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVNAQEPCNGRTAL 155 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCHH
Confidence 9999999999999999999999987 2 3567999999999999999999999999 99999998 999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 312 HVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 312 h~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|..+.
T Consensus 156 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 156 HLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 99999999999999999999999999999999999999999999999999998765
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.2e-33 Score=257.81 Aligned_cols=187 Identities=18% Similarity=0.196 Sum_probs=166.5
Q ss_pred chhHHHHHHHcCcHH----HH----Hhhhhhhc----cCCCCchHHhhhcCh---hcHHHHHHHHHhcccccccCcccCC
Q 014273 174 VIPILVAALHCQLNR----LH----SCCIQRIA----RSNLDNVCLEKELPD---EVSSEIKSLRVKSNQESEANIKEVD 238 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll----~~g~~~~~----~~~~g~t~L~~a~~~---~~~~~~~~L~~~~~~~~ga~~~~~~ 238 (427)
|.||||.|+..|+.+ ++ +.|++++. ++..|.||||+|+.. ++.+++++|+ +.|++++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll-----~~g~~~~~~~ 76 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLL-----QIDKDSGNPK 76 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHH-----HHHHHTTCSS
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHH-----hcCCcccchh
Confidence 589999999999875 33 47888887 889999999999998 9999999999 6777776442
Q ss_pred --------CCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---CCC-------------CchHHHHHHHcCCHHHHHHHH
Q 014273 239 --------PMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLD-------------DAFALHYAAAYCNPKVFKEVL 293 (427)
Q Consensus 239 --------~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d~~-------------g~t~Lh~A~~~g~~~~v~~Ll 293 (427)
..|..|.||||+|+..|+.+++++|+++| ++ |.. |+||||+|+..|+.+++++|+
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 156 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLL 156 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 23578999999999999999999999999 44 333 999999999999999999999
Q ss_pred H---cCCCCCcCCCCCCCcHHHHHHH--cCCHH-------HHHHHHhCCCCC-------CCCCCCCCCHHHHHHhhCCCc
Q 014273 294 N---MGLADLNLKDARGRTVLHVAAR--RKEPA-------VLETLLSKGACA-------SETTSDGRTAVAICRRMTRRK 354 (427)
Q Consensus 294 ~---~~~advn~~d~~g~TpLh~A~~--~g~~~-------~v~~Ll~~Gadv-------n~~d~~g~tpL~~A~~~~~~~ 354 (427)
+ .| +++|.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+..
T Consensus 157 ~~~~~g-a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 157 ENPHQP-ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp HCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred hccccC-CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHH
Confidence 9 77 9999999999999999999 88888 999999999999 999999999999999999999
Q ss_pred chhHHHhcCCCc
Q 014273 355 DYIEASKQGQET 366 (427)
Q Consensus 355 ~i~~~~~~g~~~ 366 (427)
.++.+.++|..+
T Consensus 236 ~v~~Ll~~g~~~ 247 (256)
T 2etb_A 236 IFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhCCCCC
Confidence 999999987654
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.9e-32 Score=234.09 Aligned_cols=151 Identities=22% Similarity=0.238 Sum_probs=132.4
Q ss_pred hHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHH
Q 014273 176 PILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKA 251 (427)
Q Consensus 176 t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A 251 (427)
+.|+.|+..|+.+ |+++|++++.+|..|.||||+|+..+..++++.|+ +.|++++.. |..|.||||+|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll-----~~gad~~~~---d~~g~TpLh~A 77 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-----SKGADVNAK---DSDGRTPLHHA 77 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTSCCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-----hcccchhhh---ccCCCCHHHHH
Confidence 4567777777755 66777777788888999999999999999999998 889999988 88999999999
Q ss_pred HhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 014273 252 LDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLL 327 (427)
Q Consensus 252 ~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll 327 (427)
+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|+++| +|++.+|.+|+||||+|+..|+.+++++|+
T Consensus 78 ~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 78 AENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 4 4678999999999999999999999998 999999999999999999999999999999
Q ss_pred hCCCCCCC
Q 014273 328 SKGACASE 335 (427)
Q Consensus 328 ~~Gadvn~ 335 (427)
++||+++.
T Consensus 157 ~~GA~ie~ 164 (169)
T 4gpm_A 157 KQGGWLEH 164 (169)
T ss_dssp TC------
T ss_pred HCCCCcCC
Confidence 99999874
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-32 Score=255.38 Aligned_cols=187 Identities=18% Similarity=0.135 Sum_probs=168.9
Q ss_pred CchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 173 DVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 173 ~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
.+.|||+.|+..|+.+ |+++|++++.++..|.||||+|+..++.+++++|+ +.|++++.. +..|.|||
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-----~~ga~~~~~---~~~g~tpL 110 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLV-----ENGANINQP---DNEGWIPL 110 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTSCCHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-----HCCCCCCCC---CCCCCcHH
Confidence 4689999999999977 77889999999999999999999999999999999 889999988 88999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCc-----------------------
Q 014273 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLN----------------------- 301 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn----------------------- 301 (427)
|+|+..|+.+++++|+++| + .|..|.||||+|+..++.++++.++...+++++
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 9999999999999999999 3 477899999999999999999888776545544
Q ss_pred ---CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 302 ---LKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 302 ---~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
..+..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+...++.+.+.|.++.
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME 259 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 367889999999999999999999999999999999999999999999998777777777776543
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.7e-32 Score=253.04 Aligned_cols=189 Identities=18% Similarity=0.165 Sum_probs=162.6
Q ss_pred CCCchhHHHHHHHcCcHH----HHHhhh----hhh----ccCCCCchHHhhhcCh---hcHHHHHHHHHhcccccccCcc
Q 014273 171 VEDVIPILVAALHCQLNR----LHSCCI----QRI----ARSNLDNVCLEKELPD---EVSSEIKSLRVKSNQESEANIK 235 (427)
Q Consensus 171 ~~~~~t~L~~A~~~~~~~----Ll~~g~----~~~----~~~~~g~t~L~~a~~~---~~~~~~~~L~~~~~~~~ga~~~ 235 (427)
+..+.||||.|+..|+.+ |++.+. +++ .++..|.||||+|+.. ++.+++++|+ +.|++++
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll-----~~ga~~~ 84 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLL-----DVARKTD 84 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHH-----HHHHHTT
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHH-----Hhhcccc
Confidence 344599999999999976 665543 333 3478999999999975 9999999999 6665532
Q ss_pred -------cC-CCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---CC--------------CCchHHHHHHHcCCHHHH
Q 014273 236 -------EV-DPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TL--------------DDAFALHYAAAYCNPKVF 289 (427)
Q Consensus 236 -------~~-~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d~--------------~g~t~Lh~A~~~g~~~~v 289 (427)
.. ...|..|.||||+|+..|+.+++++|+++| ++ +. .|+||||+|+..|+.+++
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 21 113678999999999999999999999999 44 33 699999999999999999
Q ss_pred HHHHH---cCCCCCcCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCC-------CCCCCCCCHHHHHHhh
Q 014273 290 KEVLN---MGLADLNLKDARGRTVLHVAARRKE---------PAVLETLLSKGACAS-------ETTSDGRTAVAICRRM 350 (427)
Q Consensus 290 ~~Ll~---~~~advn~~d~~g~TpLh~A~~~g~---------~~~v~~Ll~~Gadvn-------~~d~~g~tpL~~A~~~ 350 (427)
++|++ .| +++|.+|..|+||||+|+..|+ .+++++|+++|+++| .+|..|+||||+|+..
T Consensus 165 ~~Ll~~~~~g-ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 165 KFLLQNSWQP-ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHhcccCC-CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 99999 77 9999999999999999999998 899999999999997 4899999999999999
Q ss_pred CCCcchhHHHhcCCC
Q 014273 351 TRRKDYIEASKQGQE 365 (427)
Q Consensus 351 ~~~~~i~~~~~~g~~ 365 (427)
|+...++.+.+.|.+
T Consensus 244 g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 244 GKIGVLAYILQREIH 258 (273)
T ss_dssp TCHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHCCCC
Confidence 999999999999983
No 44
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=6.9e-31 Score=235.77 Aligned_cols=184 Identities=16% Similarity=0.063 Sum_probs=169.8
Q ss_pred HHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHH----HHHhhh-hhhccCCCCchHHhhhcChh
Q 014273 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNR----LHSCCI-QRIARSNLDNVCLEKELPDE 214 (427)
Q Consensus 140 ~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~-~~~~~~~~g~t~L~~a~~~~ 214 (427)
.++||+|+..+..+++++|+++|++++.++..+ .||||+|+..++.+ |++++. +++.++..|.||||+|+..+
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 103 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASADANIQDNMG--RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA 103 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHT
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhC
Confidence 467999999999999999999999998776555 99999999999987 555555 77888899999999999999
Q ss_pred cHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHH
Q 014273 215 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFK 290 (427)
Q Consensus 215 ~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~ 290 (427)
+.++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|+++| + .|..|.||||+|+..|+.++++
T Consensus 104 ~~~~~~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 175 (223)
T 2f8y_A 104 VEGMLEDLI-----NSHADVNAV---DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 175 (223)
T ss_dssp CHHHHHHHH-----HTTCCTTCB---CTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred cHHHHHHHH-----HcCCCCcCc---CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence 999999999 789999988 789999999999999999999999999 3 4678999999999999999999
Q ss_pred HHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 014273 291 EVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACAS 334 (427)
Q Consensus 291 ~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn 334 (427)
+|+++| ++++.+|..|+||||+|+..|+.+++++|+++|+...
T Consensus 176 ~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 176 VLLDHF-ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHHHcC-CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 999998 9999999999999999999999999999999999754
No 45
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.3e-32 Score=262.09 Aligned_cols=193 Identities=16% Similarity=0.077 Sum_probs=161.0
Q ss_pred HHHHHHHhcChHHHHHHHHHhcccccc-cCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhc
Q 014273 141 ELIYACAAFQITELVSYFQCLLLILAE-NAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEV 215 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~~i~~-~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~ 215 (427)
..+|.|+.....+++++|++.|+++|. ++..+ .||||+|+..|+.+ |+++|++++.++..|.||||+|+..++
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g--~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHG--NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCSTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccCCCC--CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence 346777888888999999999999997 55555 99999999999977 888999999999999999999999888
Q ss_pred ---HHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHh----cCCHHHHHHHHHc--------------------C-
Q 014273 216 ---SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALD----SDDFELLNLLLNE--------------------Y- 267 (427)
Q Consensus 216 ---~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~----~~~~~~v~~Ll~~--------------------g- 267 (427)
.+.++.|+... +++++.. |..|.||||+|+. .|+.+++++|++. |
T Consensus 177 ~~~~~~~~~ll~~~----~~~~~~~---d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~ 249 (327)
T 1sw6_A 177 NYDSGTFEALLDYL----YPCLILE---DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 249 (327)
T ss_dssp HHHTTCHHHHHHHH----GGGGGEE---CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------
T ss_pred cccHHHHHHHHHhh----hccccCC---CCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccC
Confidence 67777777322 2577777 8899999999999 8999999999987 5
Q ss_pred ---CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Q 014273 268 ---EVTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAV 344 (427)
Q Consensus 268 ---~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL 344 (427)
..+..|+||||+|+. +++|++. ++|.+|..|+||||+|+..|+.+++++|+++|||++.+|..|+|||
T Consensus 250 ~~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL 320 (327)
T 1sw6_A 250 KPNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPV 320 (327)
T ss_dssp ----------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGG
T ss_pred CcccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 236789999999985 8999987 5899999999999999999999999999999999999999999999
Q ss_pred HHHHhhC
Q 014273 345 AICRRMT 351 (427)
Q Consensus 345 ~~A~~~~ 351 (427)
|+|+++|
T Consensus 321 ~~A~~~g 327 (327)
T 1sw6_A 321 DFGAGLE 327 (327)
T ss_dssp GGTCC--
T ss_pred HHHHhcC
Confidence 9998764
No 46
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=5e-31 Score=238.80 Aligned_cols=221 Identities=13% Similarity=0.060 Sum_probs=191.8
Q ss_pred CCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCch
Q 014273 171 VEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVR 246 (427)
Q Consensus 171 ~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t 246 (427)
+..+.++|+.|+..|..+ |++.|++++.++..|.||||+|+..++.+++++|+ +.|++++.. .+..|.|
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~~~~~~~~--~~~~~~t 78 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYI-----SKGAIVDQL--GGDLNST 78 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC--BTTTTBC
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHH-----HcCCcchhh--cCCcCCC
Confidence 344599999999999977 77888899999999999999999999999999999 778888766 2556999
Q ss_pred HHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCC-HH
Q 014273 247 RIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE-PA 321 (427)
Q Consensus 247 ~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~-~~ 321 (427)
|||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHH
Confidence 999999999999999999998 3 4678999999999999999999999998 9999999999999999997776 89
Q ss_pred HHHHHHhCCCCCCCCCC-CCCCHHHHHHhhCCCcchhHHHhcCCCccchhhhHHHHHHHHhccCCCCCcchhhhhccchh
Q 014273 322 VLETLLSKGACASETTS-DGRTAVAICRRMTRRKDYIEASKQGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVMGDAF 400 (427)
Q Consensus 322 ~v~~Ll~~Gadvn~~d~-~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 400 (427)
++++|++.|++++..+. .|.||||+|+..++...++.+.+.|..+... ...|.++++.+...+
T Consensus 158 ~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--------------~~~g~t~l~~A~~~~-- 221 (240)
T 3eu9_A 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQ--------------NIKGESALDLAKQRK-- 221 (240)
T ss_dssp THHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCB--------------CTTSCBHHHHHHHTT--
T ss_pred HHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc--------------CCCCCCHHHHHHHcC--
Confidence 99999999999999997 9999999999999999999999998776532 245677888776554
Q ss_pred hhhHhhhccchhHHHHHHhhhhhe
Q 014273 401 QMKLDYLEKKGDIYFLVLVHCLLI 424 (427)
Q Consensus 401 ~~~~~~~e~r~~~~~~l~~~~~~~ 424 (427)
+.+++++|+++|.+.
T Consensus 222 ---------~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 222 ---------NVWMINHLQEARQAK 236 (240)
T ss_dssp ---------CHHHHHHHHHHC---
T ss_pred ---------cHHHHHHHHHhhhcc
Confidence 556677777777654
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.9e-31 Score=239.79 Aligned_cols=189 Identities=11% Similarity=0.029 Sum_probs=166.7
Q ss_pred HHHHHHHhcChHHHHHHHHHh-cccccccCCCCCchhHHHHHHHcCcHH----HHHhhhhh-----hccCCCCchHHhhh
Q 014273 141 ELIYACAAFQITELVSYFQCL-LLILAENAPVEDVIPILVAALHCQLNR----LHSCCIQR-----IARSNLDNVCLEKE 210 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~-g~~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~-----~~~~~~g~t~L~~a 210 (427)
++||.|+..+..+++++|++. |++++.++..+ .||||+|+..|+.+ |+++|+++ +.++..|.||||+|
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 5 SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMG--ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCC--CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 579999999999999999998 99999776555 99999999999977 67777776 56677999999999
Q ss_pred cChhcHHHHHHHHHhcccccccCcccCCC----------CCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchH
Q 014273 211 LPDEVSSEIKSLRVKSNQESEANIKEVDP----------MHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFA 276 (427)
Q Consensus 211 ~~~~~~~~~~~L~~~~~~~~ga~~~~~~~----------~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~ 276 (427)
+..++.+++++|+ +.|++++..+. .+..|.||||+|+..|+.+++++|+++| + .|..|+||
T Consensus 83 ~~~~~~~~v~~Ll-----~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~ 157 (232)
T 2rfa_A 83 VINQNVNLVRALL-----ARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTV 157 (232)
T ss_dssp HHTTCHHHHHHHH-----HTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHcCCHHHHHHHH-----hCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 9999999999999 88999988732 1347999999999999999999999999 4 47889999
Q ss_pred HHHHHHcCCHHHH----HHHHHcCCCCC------cCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 014273 277 LHYAAAYCNPKVF----KEVLNMGLADL------NLKDARGRTVLHVAARRKEPAVLETLLSKGACASETT 337 (427)
Q Consensus 277 Lh~A~~~g~~~~v----~~Ll~~~~adv------n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d 337 (427)
||+|+..|+.+++ ++|++.| +++ +.+|..|+||||+|+..|+.+++++|+++|++.....
T Consensus 158 L~~A~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 158 LHILILQPNKTFACQMYNLLLSYD-GGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHTT-CSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHcCChHHHHHHHHHHHhcC-CchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 9999999999988 9999998 888 6899999999999999999999999999998776544
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.3e-31 Score=246.49 Aligned_cols=188 Identities=19% Similarity=0.220 Sum_probs=162.5
Q ss_pred chhHHHHHHHcCcHH----HHH----hhhhhhccC----CCCchHHhhhc---ChhcHHHHHHHHHhcccccccCccc--
Q 014273 174 VIPILVAALHCQLNR----LHS----CCIQRIARS----NLDNVCLEKEL---PDEVSSEIKSLRVKSNQESEANIKE-- 236 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll~----~g~~~~~~~----~~g~t~L~~a~---~~~~~~~~~~L~~~~~~~~ga~~~~-- 236 (427)
+.++||.|+..|+.+ |++ .+.+++.++ ..|.||||+|+ ..++.+++++|+ +.|++++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll-----~~g~~~~~~~ 79 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILL-----DIAEKTGNMR 79 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHH-----HHHHHTTCHH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHH-----HhcccccchH
Confidence 489999999999876 555 777777665 66999999888 779999999999 55544322
Q ss_pred ------CCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---C--------------CCCchHHHHHHHcCCHHHHHHH
Q 014273 237 ------VDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T--------------LDDAFALHYAAAYCNPKVFKEV 292 (427)
Q Consensus 237 ------~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d--------------~~g~t~Lh~A~~~g~~~~v~~L 292 (427)
.+..|..|.||||+|+..|+.+++++|+++| ++ + ..|+||||+|+..|+.+++++|
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 1223669999999999999999999999999 44 3 4699999999999999999999
Q ss_pred HH---cCCCCCcCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCC-------CCCCCCCCCHHHHHHhhCCC
Q 014273 293 LN---MGLADLNLKDARGRTVLHVAARRKE---------PAVLETLLSKGACA-------SETTSDGRTAVAICRRMTRR 353 (427)
Q Consensus 293 l~---~~~advn~~d~~g~TpLh~A~~~g~---------~~~v~~Ll~~Gadv-------n~~d~~g~tpL~~A~~~~~~ 353 (427)
++ .| +++|.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|+||||+|++.|+.
T Consensus 160 l~~~~~g-a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 160 TENGHKQ-ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhccccC-CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 99 77 9999999999999999999888 79999999999999 78999999999999999999
Q ss_pred cchhHHHhcCCCcc
Q 014273 354 KDYIEASKQGQETN 367 (427)
Q Consensus 354 ~~i~~~~~~g~~~~ 367 (427)
..++.+.++|..+.
T Consensus 239 ~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 239 GIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcc
Confidence 99999999886543
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.2e-32 Score=248.06 Aligned_cols=201 Identities=15% Similarity=0.072 Sum_probs=173.3
Q ss_pred HHHHHHHhcChHHHHHHHHHhcc----cccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcC
Q 014273 141 ELIYACAAFQITELVSYFQCLLL----ILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELP 212 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~----~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~ 212 (427)
++||+|+..+..+++++|++.+. +++.++.. |.||||+|+..|+.+ |+++|++++.++..|.||||+|+.
T Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 87 (236)
T 1ikn_D 10 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL--QQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACE 87 (236)
T ss_dssp CTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTT--CCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHH
T ss_pred chhHHHHHcCChhHHHHHHHHhhccHHHhhccCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 56999999999999999988775 56755554 599999999999988 556778899999999999999999
Q ss_pred hhcHHHHHHHHHhcccccccCccc---CCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---CC-CCchHHHHHHHcC
Q 014273 213 DEVSSEIKSLRVKSNQESEANIKE---VDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TL-DDAFALHYAAAYC 284 (427)
Q Consensus 213 ~~~~~~~~~L~~~~~~~~ga~~~~---~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d~-~g~t~Lh~A~~~g 284 (427)
.++.++++.|+ +.|++++. .+..+..|.||||+|+..|+.+++++|+++| ++ +. .|+||||+|+..|
T Consensus 88 ~~~~~~v~~Ll-----~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 88 QGCLASVGVLT-----QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HTCHHHHHHHH-----HSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred cCCHHHHHHHH-----hcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 99999999999 66665322 2334788999999999999999999999999 43 44 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC--CCCCCCCCHHHHHHh
Q 014273 285 NPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACAS--ETTSDGRTAVAICRR 349 (427)
Q Consensus 285 ~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn--~~d~~g~tpL~~A~~ 349 (427)
+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++.. ..+..|.||.+.+..
T Consensus 163 ~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 163 NPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred CHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 999999999998 9999999999999999999999999999999999876 788889988765543
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=3.2e-30 Score=227.62 Aligned_cols=182 Identities=15% Similarity=0.072 Sum_probs=165.3
Q ss_pred hHHHHHHHHhcChHHHHHHHHHhcc-cccccCCCCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcCh
Q 014273 139 AVELIYACAAFQITELVSYFQCLLL-ILAENAPVEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPD 213 (427)
Q Consensus 139 ~~~lL~~A~~~~~~~l~~~ll~~g~-~i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~ 213 (427)
..++|+.|+..+..+.++.+++.+. +++..+.. +.||||+|+..|+.+ |+++|++++.++..|.||||+|+..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTE--GNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTT--SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 3467999999999999999998875 88876655 499999999999977 7888999999999999999999999
Q ss_pred hcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC--C---CCCCCchHHHHHHHcCC---
Q 014273 214 EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--E---VTLDDAFALHYAAAYCN--- 285 (427)
Q Consensus 214 ~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g--~---~d~~g~t~Lh~A~~~g~--- 285 (427)
++.++++.|+... +++++.. +..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..++
T Consensus 83 ~~~~~~~~Ll~~~----~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 83 GRTEILAYMLKHA----TPDLNKH---NRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp TCHHHHHHHHHHS----CCCTTCC---CTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred CCHHHHHHHHhcc----Ccccccc---cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh
Confidence 9999999999433 6678777 889999999999999999999999998 2 36789999999999998
Q ss_pred --HHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 014273 286 --PKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG 330 (427)
Q Consensus 286 --~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~G 330 (427)
.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 156 ~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 156 LYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999998 999999999999999999999999999999987
No 51
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=8.3e-31 Score=229.96 Aligned_cols=160 Identities=19% Similarity=0.187 Sum_probs=149.9
Q ss_pred hhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCC
Q 014273 196 RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTL 271 (427)
Q Consensus 196 ~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~ 271 (427)
++.+|..|.||||+|+..++.++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|++.| + .|.
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll-----~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLV-----ENFDKLEDK---DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF 99 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHH-----HHHCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHH-----Hhccccccc---cccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 5678899999999999999999999999 778898887 788999999999999999999999999 3 467
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhC
Q 014273 272 DDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMT 351 (427)
Q Consensus 272 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~ 351 (427)
.|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC
Confidence 8999999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHhcCC
Q 014273 352 RRKDYIEASKQGQ 364 (427)
Q Consensus 352 ~~~~i~~~~~~g~ 364 (427)
+...++.+.+.|+
T Consensus 179 ~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 179 RQEVIKIFTEVRR 191 (192)
T ss_dssp CHHHHHHHHHHHH
T ss_pred cHHHHHHHHhccC
Confidence 9999998887653
No 52
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=4.1e-31 Score=245.69 Aligned_cols=180 Identities=18% Similarity=0.123 Sum_probs=161.8
Q ss_pred hhHHHHHHHcCcHH----HHHhhhh--hhccCCCCchHHhhhcChhcHHHHHHHHHhccccccc-CcccCCCCCccCchH
Q 014273 175 IPILVAALHCQLNR----LHSCCIQ--RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEA-NIKEVDPMHEKRVRR 247 (427)
Q Consensus 175 ~t~L~~A~~~~~~~----Ll~~g~~--~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga-~~~~~~~~~~~g~t~ 247 (427)
.+++|.|+..+..+ +++.+.+ ++.+|..|.||||+|+..++.++++.|+ +.|+ +++.. +..|.||
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll-----~~g~~~~~~~---~~~g~tp 148 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLL-----DSGVCKVDKQ---NRAGYSP 148 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTSCCCTTCC---CTTSCCH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHH-----HCCCCcCCCC---CCCCCCH
Confidence 45567777777765 4444444 7889999999999999999999999999 7787 88887 8899999
Q ss_pred HHHHH-----hcCCHHHHHHHHHcC----CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcC
Q 014273 248 IHKAL-----DSDDFELLNLLLNEY----EVTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (427)
Q Consensus 248 Lh~A~-----~~~~~~~v~~Ll~~g----~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g 318 (427)
||+|+ ..++.+++++|++.| ..+..|+||||+|+..|+.+++++|++.| +|+|.+|.+|+||||+|+..|
T Consensus 149 L~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g 227 (276)
T 4hbd_A 149 IMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTALMCACEHG 227 (276)
T ss_dssp HHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCC
Confidence 99999 668899999999999 23567999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcC
Q 014273 319 EPAVLETLLS-KGACASETTSDGRTAVAICRRMTRRKDYIEASKQG 363 (427)
Q Consensus 319 ~~~~v~~Ll~-~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g 363 (427)
+.+++++|++ .|+|++.+|..|+||||+|+..|+...++.+.+++
T Consensus 228 ~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 228 HKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999 89999999999999999999999999999888765
No 53
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=6e-31 Score=241.56 Aligned_cols=188 Identities=16% Similarity=0.181 Sum_probs=163.8
Q ss_pred hHHHHHHHHhcChHH----HHHHHHHhcccccc----cCCCCCchhHHHHHHHc---CcHH----HHHhhhhhhcc----
Q 014273 139 AVELIYACAAFQITE----LVSYFQCLLLILAE----NAPVEDVIPILVAALHC---QLNR----LHSCCIQRIAR---- 199 (427)
Q Consensus 139 ~~~lL~~A~~~~~~~----l~~~ll~~g~~i~~----~~~~~~~~t~L~~A~~~---~~~~----Ll~~g~~~~~~---- 199 (427)
..++||.|+..|..+ +++++++.|++++. ++.. |.||||+|+.. |+.+ |++.|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~--g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGST--GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTT--TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCC--CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 347899999999886 77888889999986 4544 49999999999 8855 78888887633
Q ss_pred -------CCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCC----------CccCchHHHHHHhcCCHHHHHH
Q 014273 200 -------SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPM----------HEKRVRRIHKALDSDDFELLNL 262 (427)
Q Consensus 200 -------~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~----------~~~g~t~Lh~A~~~~~~~~v~~ 262 (427)
+..|.||||+|+..++.+++++|+ +.|++++..+.. +..|.||||+|+..|+.+++++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-----~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLV-----ENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHH-----HcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 367999999999999999999999 889999988321 1139999999999999999999
Q ss_pred HHH---cC-C---CCCCCchHHHHHHH--cCCHH-------HHHHHHHcCCCCC-------cCCCCCCCcHHHHHHHcCC
Q 014273 263 LLN---EY-E---VTLDDAFALHYAAA--YCNPK-------VFKEVLNMGLADL-------NLKDARGRTVLHVAARRKE 319 (427)
Q Consensus 263 Ll~---~g-~---~d~~g~t~Lh~A~~--~g~~~-------~v~~Ll~~~~adv-------n~~d~~g~TpLh~A~~~g~ 319 (427)
|++ .| + .|..|+||||+|+. .++.+ ++++|+++| +++ |.+|..|+||||+|+..|+
T Consensus 155 Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 155 LLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHHHHHHhCC
Confidence 999 78 3 47789999999999 78888 999999999 999 9999999999999999999
Q ss_pred HHHHHHHHhCCCCCC
Q 014273 320 PAVLETLLSKGACAS 334 (427)
Q Consensus 320 ~~~v~~Ll~~Gadvn 334 (427)
.+++++|+++|++..
T Consensus 234 ~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 234 IEIFRHILQREFSGA 248 (256)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCC
Confidence 999999999987653
No 54
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=5.1e-31 Score=244.47 Aligned_cols=201 Identities=16% Similarity=0.142 Sum_probs=158.2
Q ss_pred hHHHHHHHHhcChHHHHHHHHHhc----cccccc--CCCCCchhHHHHHHHc---CcHH----HHHhhhh-------hhc
Q 014273 139 AVELIYACAAFQITELVSYFQCLL----LILAEN--APVEDVIPILVAALHC---QLNR----LHSCCIQ-------RIA 198 (427)
Q Consensus 139 ~~~lL~~A~~~~~~~l~~~ll~~g----~~i~~~--~~~~~~~t~L~~A~~~---~~~~----Ll~~g~~-------~~~ 198 (427)
..++||.|+..|..++++.|++.+ .+++.. ..+..|.||||+|+.. |+.+ |+++|++ ++.
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 457899999999999888888754 444321 1244569999999987 7755 6777765 333
Q ss_pred ----cCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCC-----------CCccCchHHHHHHhcCCHHHHHHH
Q 014273 199 ----RSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP-----------MHEKRVRRIHKALDSDDFELLNLL 263 (427)
Q Consensus 199 ----~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~-----------~~~~g~t~Lh~A~~~~~~~~v~~L 263 (427)
++..|.||||+|+..++.+++++|+ +.|++++..+. .+..|.||||+|+..|+.+++++|
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll-----~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERRNMTLVTLLV-----ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred ccccccCCCCCHHHHHHHcCCHHHHHHHH-----HCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 5668999999999999999999999 88999998831 012799999999999999999999
Q ss_pred HH---cC-C---CCCCCchHHHHHHHcCC---------HHHHHHHHHcCCCCCc-------CCCCCCCcHHHHHHHcCCH
Q 014273 264 LN---EY-E---VTLDDAFALHYAAAYCN---------PKVFKEVLNMGLADLN-------LKDARGRTVLHVAARRKEP 320 (427)
Q Consensus 264 l~---~g-~---~d~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~advn-------~~d~~g~TpLh~A~~~g~~ 320 (427)
++ .| + .|..|+||||+|+..|+ .+++++|+++| +++| .+|..|+||||+|+..|+.
T Consensus 168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-AKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-hhcccccccccccCCCCCCHHHHHHHhChH
Confidence 99 77 3 47789999999999988 79999999999 9997 4899999999999999999
Q ss_pred HHHHHHHhCCC-CCCCCCCCCCCHHH
Q 014273 321 AVLETLLSKGA-CASETTSDGRTAVA 345 (427)
Q Consensus 321 ~~v~~Ll~~Ga-dvn~~d~~g~tpL~ 345 (427)
+++++|+++|| |+......+.+|-+
T Consensus 247 ~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 247 GVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHTC--------------
T ss_pred HHHHHHHHCCCCCchhhhhhhhhccC
Confidence 99999999999 89888887777643
No 55
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.7e-29 Score=216.92 Aligned_cols=155 Identities=23% Similarity=0.228 Sum_probs=143.6
Q ss_pred CCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCch
Q 014273 200 SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAF 275 (427)
Q Consensus 200 ~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t 275 (427)
...+.++|+.|+..|+.++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|+++| + .|..|+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 82 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILM-----ANGADVNAE---DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMT 82 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHH-----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCcccchHHHHHHcCCHHHHHHHH-----HCCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence 356789999999999999999999 789999888 789999999999999999999999998 3 4678999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcc
Q 014273 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKD 355 (427)
Q Consensus 276 ~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~ 355 (427)
|||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++...
T Consensus 83 ~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 83 PLRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHH
Confidence 999999999999999999998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhcC
Q 014273 356 YIEASKQG 363 (427)
Q Consensus 356 i~~~~~~g 363 (427)
++.+.+.|
T Consensus 162 ~~~L~~~G 169 (169)
T 2y1l_E 162 AEILQKLN 169 (169)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHcC
Confidence 98888765
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.2e-29 Score=217.25 Aligned_cols=155 Identities=17% Similarity=0.169 Sum_probs=145.8
Q ss_pred CCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHH
Q 014273 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFAL 277 (427)
Q Consensus 202 ~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~L 277 (427)
.|.||||.|+..|+.++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|++.| + .|..|.|||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll-----~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRI-----EQENVINHT---DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHH-----HHSSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCcchHHHHHHCCCHHHHHHHH-----HcCCCcCCC---CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 5889999999999999999999 778888887 889999999999999999999999999 3 467899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchh
Q 014273 278 HYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYI 357 (427)
Q Consensus 278 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~ 357 (427)
|+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhcCCC
Q 014273 358 EASKQGQE 365 (427)
Q Consensus 358 ~~~~~g~~ 365 (427)
.+.+++..
T Consensus 153 ~L~~~~~~ 160 (167)
T 3v31_A 153 VIESHLLK 160 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876543
No 57
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2.6e-29 Score=213.96 Aligned_cols=153 Identities=20% Similarity=0.168 Sum_probs=142.8
Q ss_pred CCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHH
Q 014273 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFAL 277 (427)
Q Consensus 202 ~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~L 277 (427)
...||||.|+..++.++++.|+ +.|++++.. +..|.||||+|+. |+.+++++|++.| + .|..|+|||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll-----~~~~~~~~~---~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L 74 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLL-----QNNVNVNAQ---NGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVI 74 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHT-----TSCCCTTCC---CTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHH-----hCCCCcccc---CccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 4679999999999999999999 789999888 8899999999999 9999999999999 4 367899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHhhCCCcch
Q 014273 278 HYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC-ASETTSDGRTAVAICRRMTRRKDY 356 (427)
Q Consensus 278 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gad-vn~~d~~g~tpL~~A~~~~~~~~i 356 (427)
|+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++...+
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 9999999999999999998 99999999999999999999999999999999998 699999999999999999999999
Q ss_pred hHHHhcCC
Q 014273 357 IEASKQGQ 364 (427)
Q Consensus 357 ~~~~~~g~ 364 (427)
+.+.+.|.
T Consensus 154 ~~Ll~~GA 161 (162)
T 1ihb_A 154 SLMQANGA 161 (162)
T ss_dssp HHHHHTC-
T ss_pred HHHHHhCC
Confidence 99999886
No 58
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=8.3e-30 Score=234.39 Aligned_cols=190 Identities=14% Similarity=0.119 Sum_probs=160.7
Q ss_pred hHHHHHHHHhcChHH----HHHHHHHhcccccccCCC--CCchhHHHHHH---HcCcHH----HHHhhhh----------
Q 014273 139 AVELIYACAAFQITE----LVSYFQCLLLILAENAPV--EDVIPILVAAL---HCQLNR----LHSCCIQ---------- 195 (427)
Q Consensus 139 ~~~lL~~A~~~~~~~----l~~~ll~~g~~i~~~~~~--~~~~t~L~~A~---~~~~~~----Ll~~g~~---------- 195 (427)
..++|+.|+..|..+ +++++++.+.+++..+.. ..|.||||+|+ ..|+.+ |++.|++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 446799999999888 566666699998866532 55799999999 567755 6666654
Q ss_pred -hhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCC-----------CCccCchHHHHHHhcCCHHHHHHH
Q 014273 196 -RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP-----------MHEKRVRRIHKALDSDDFELLNLL 263 (427)
Q Consensus 196 -~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~-----------~~~~g~t~Lh~A~~~~~~~~v~~L 263 (427)
++.++..|.||||+|+..++.+++++|+ +.|++++..+. .+..|.||||+|+..|+.+++++|
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-----~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLV-----EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHH-----HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHH-----hCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 2334458999999999999999999999 88999998831 015799999999999999999999
Q ss_pred HH---cC-C---CCCCCchHHHHHHHcCC---------HHHHHHHHHcCCCCC-------cCCCCCCCcHHHHHHHcCCH
Q 014273 264 LN---EY-E---VTLDDAFALHYAAAYCN---------PKVFKEVLNMGLADL-------NLKDARGRTVLHVAARRKEP 320 (427)
Q Consensus 264 l~---~g-~---~d~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~adv-------n~~d~~g~TpLh~A~~~g~~ 320 (427)
++ .| + .|..|+||||+|+..|+ .+++++|+++| +++ +.+|..|+||||+|+..|+.
T Consensus 160 l~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 160 TENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-cccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 99 77 3 47789999999999887 79999999999 999 77999999999999999999
Q ss_pred HHHHHHHhCCCCCC
Q 014273 321 AVLETLLSKGACAS 334 (427)
Q Consensus 321 ~~v~~Ll~~Gadvn 334 (427)
+++++|+++|++..
T Consensus 239 ~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 239 GIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcc
Confidence 99999999997654
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.1e-29 Score=216.94 Aligned_cols=154 Identities=19% Similarity=0.202 Sum_probs=102.6
Q ss_pred CchHHhhhcChhcHHHHHHHHHhcccccccC-cccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHH
Q 014273 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEAN-IKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFAL 277 (427)
Q Consensus 203 g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~-~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~L 277 (427)
+.||||.|+..++.+.++.|+ +.+.+ ++.. +..|.||||+|+..|+.+++++|+++| + .|..|+|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll-----~~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHL-----RKGDNLVNKP---DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESAL 73 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHH-----TTCSGGGGCC---CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHH
T ss_pred chhhHHHHHHcCCHHHHHHHH-----HcCcccccCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHH
Confidence 356677777777777777666 33433 4444 566677777777777777777777766 2 245667777
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchh
Q 014273 278 HYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYI 357 (427)
Q Consensus 278 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~ 357 (427)
|+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 7777777777777777666 777777777777777777777777777777777777777777777777777777666666
Q ss_pred HHHhcCCC
Q 014273 358 EASKQGQE 365 (427)
Q Consensus 358 ~~~~~g~~ 365 (427)
.+.+.|..
T Consensus 153 ~L~~~~~~ 160 (172)
T 3v30_A 153 VIENHILK 160 (172)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=6.3e-29 Score=213.90 Aligned_cols=161 Identities=14% Similarity=0.014 Sum_probs=137.0
Q ss_pred chhHHHHHHHcCcHHHHHhhhhhhcc----CCCC-chHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 174 VIPILVAALHCQLNRLHSCCIQRIAR----SNLD-NVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~Ll~~g~~~~~~----~~~g-~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
..||||.|+..|+.+.++..++.... .... .||||+|+..++.+++++|+ +.|++++.. +..|.|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L 73 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-----EWGADPHIL---AKERESAL 73 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH-----HHTCCTTCC---CTTCCCHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH-----HcCCCchhh---cccCCCHH
Confidence 37899999999998866555443221 1222 48999999999999999999 789999988 78999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHH
Q 014273 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~ 324 (427)
|+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 9999999999999999999 4 4678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCCCCH
Q 014273 325 TLLSKGACASETTSDGRTA 343 (427)
Q Consensus 325 ~Ll~~Gadvn~~d~~g~tp 343 (427)
+|+++|+++..++..|.||
T Consensus 153 ~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 153 VIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHSCC-------
T ss_pred HHHHHHHHHhcccCCCCCC
Confidence 9999999999999999987
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=7.3e-29 Score=209.34 Aligned_cols=147 Identities=23% Similarity=0.173 Sum_probs=136.2
Q ss_pred CchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHH
Q 014273 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALH 278 (427)
Q Consensus 203 g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh 278 (427)
..|+|+.|+..|+.++++.|+ +.|++++ . +..|.||||+|+..|+.+++++|++.| + .|..|+||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll-----~~g~~~~-~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 72 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILM-----ANGAPFT-T---DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLH 72 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHH-----HHTCCCC-C---CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHH-----HcCCCCC-c---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 468999999999999999999 6777765 3 778999999999999999999999998 3 4678999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhH
Q 014273 279 YAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIE 358 (427)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~ 358 (427)
+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+...++.
T Consensus 73 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 73 MAASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999998 9999999999999999999999999999999999999999999999999999998777665
Q ss_pred H
Q 014273 359 A 359 (427)
Q Consensus 359 ~ 359 (427)
+
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 3
No 62
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=5.1e-30 Score=244.22 Aligned_cols=217 Identities=14% Similarity=0.009 Sum_probs=161.6
Q ss_pred ChHHHHHHHHHhcccccccCC------------CCC---chhHHHHHHHcCcHH----HHHhhhhhhc-cCCCCchHHhh
Q 014273 150 QITELVSYFQCLLLILAENAP------------VED---VIPILVAALHCQLNR----LHSCCIQRIA-RSNLDNVCLEK 209 (427)
Q Consensus 150 ~~~~l~~~ll~~g~~i~~~~~------------~~~---~~t~L~~A~~~~~~~----Ll~~g~~~~~-~~~~g~t~L~~ 209 (427)
|..+++++|+++|++.+.... .+. ..+.+|+|+..+..+ |++.|++++. ++..|.||||+
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~ 137 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHW 137 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHH
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHH
Confidence 889999999999988764111 001 122346666666555 4457788999 89999999999
Q ss_pred hcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCC---HHHHHHHHHcC-----CCCCCCchHHHHHH
Q 014273 210 ELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDD---FELLNLLLNEY-----EVTLDDAFALHYAA 281 (427)
Q Consensus 210 a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~---~~~v~~Ll~~g-----~~d~~g~t~Lh~A~ 281 (427)
|+..++.+++++|+ +.|++++.. |..|.||||+|+..|+ .++++.|++.+ ..|..|+||||+|+
T Consensus 138 Aa~~g~~~~v~~Ll-----~~Gad~n~~---d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 209 (327)
T 1sw6_A 138 LTSIANLELVKHLV-----KHGSNRLYG---DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHII 209 (327)
T ss_dssp HHHTTCHHHHHHHH-----HTTCCTTBC---CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHH-----HcCCCCCCc---CCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHH
Confidence 99999999999999 889999988 8899999999999998 56777777765 34789999999999
Q ss_pred H----cCCHHHHHHHHHcC-------------------CCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 014273 282 A----YCNPKVFKEVLNMG-------------------LADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTS 338 (427)
Q Consensus 282 ~----~g~~~~v~~Ll~~~-------------------~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~ 338 (427)
. .|+.+++++|++.+ ++++|.+|..|+||||+|+. +++|+++ ++|.+|.
T Consensus 210 ~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~ 281 (327)
T 1sw6_A 210 ITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--MLNAQDS 281 (327)
T ss_dssp HHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TTTCCCT
T ss_pred HHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CCCCCCC
Confidence 9 89999999999873 49999999999999999985 8999998 6999999
Q ss_pred CCCCHHHHHHhhCCCcchhHHHhcCCCccchhhhHHHHHHHHhccCCCCCcchhhhhc
Q 014273 339 DGRTAVAICRRMTRRKDYIEASKQGQETNKDWLCIAFLEREIRRNSMSGNLAMSADVM 396 (427)
Q Consensus 339 ~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 396 (427)
.|+||||+|++.|+...++.+.+.|..+... ...|.++++.++.
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~--------------d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYGADPFIA--------------NKSGLRPVDFGAG 325 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCC--------------CTTSCCGGGGTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCccc--------------CCCCCCHHHHHHh
Confidence 9999999999999888888888888765432 2356667766643
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=2e-28 Score=208.40 Aligned_cols=149 Identities=17% Similarity=0.103 Sum_probs=136.9
Q ss_pred chhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHH
Q 014273 174 VIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh 249 (427)
..|||+.|+..|+.+ |+++|++++.++..|.||||+|+. ++.+++++|+ +.|++++.. +..|.||||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~ 75 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLL-----LRGANPDLK---DRTGFAVIH 75 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHH-----HTTCCTTCC---CTTSCCHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHH-----HcCCCCCCC---CCCCCCHHH
Confidence 478999999999877 666778888899999999999999 9999999999 789999988 889999999
Q ss_pred HHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCcHHHHHHHcCCHHHHH
Q 014273 250 KALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLAD-LNLKDARGRTVLHVAARRKEPAVLE 324 (427)
Q Consensus 250 ~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ad-vn~~d~~g~TpLh~A~~~g~~~~v~ 324 (427)
+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|+++| ++ ++.+|..|+||||+|+..|+.++++
T Consensus 76 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT-ASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc-CCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 999999999999999999 3 4678999999999999999999999999 76 7999999999999999999999999
Q ss_pred HHHhCCCC
Q 014273 325 TLLSKGAC 332 (427)
Q Consensus 325 ~Ll~~Gad 332 (427)
+|+++|||
T Consensus 155 ~Ll~~GAd 162 (162)
T 1ihb_A 155 LMQANGAG 162 (162)
T ss_dssp HHHHTC--
T ss_pred HHHHhCCC
Confidence 99999986
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=7.3e-29 Score=211.96 Aligned_cols=157 Identities=18% Similarity=0.205 Sum_probs=138.8
Q ss_pred cCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCc
Q 014273 199 RSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDA 274 (427)
Q Consensus 199 ~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~ 274 (427)
.+..|.|||+.|+..++.++++.|+.. .+.+++.. +..|.||||+|+..|+.+++++|+++| + .|..|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~----~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 76 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTV----QSVNCRDI---EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGL 76 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCT----TTTTCCCT---TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHc----CCCCcccc---ccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCC
Confidence 456789999999999999999999832 34455555 778999999999999999999999999 3 467899
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCc
Q 014273 275 FALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRK 354 (427)
Q Consensus 275 t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~ 354 (427)
||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. ++..
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~ 154 (165)
T 3twr_A 77 VPLHNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTD 154 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHH
T ss_pred CHHHHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChH
Confidence 9999999999999999999998 9999999999999999999999999999999999999999999999999877 7778
Q ss_pred chhHHHhcCC
Q 014273 355 DYIEASKQGQ 364 (427)
Q Consensus 355 ~i~~~~~~g~ 364 (427)
.++.+.+.|.
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 8888877764
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=9.6e-29 Score=214.31 Aligned_cols=160 Identities=19% Similarity=0.198 Sum_probs=140.6
Q ss_pred CCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchH
Q 014273 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFA 276 (427)
Q Consensus 201 ~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~ 276 (427)
..+.++|+.|+..++.++++.|+... +.+++.. +..|.||||+|+..|+.+++++|++.| + .|..|+||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 75 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNT----ENDLNQG---DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 75 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCT----TSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcC----ccccccc---CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 35788999999999999999998322 5667766 788999999999999999999999998 3 46789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcch
Q 014273 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDY 356 (427)
Q Consensus 277 Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i 356 (427)
||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 76 LHLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999998 99999999999999999999999999999999999999999999999999999888889
Q ss_pred hHHHhcCCCccc
Q 014273 357 IEASKQGQETNK 368 (427)
Q Consensus 357 ~~~~~~g~~~~~ 368 (427)
+.+.+.|..+..
T Consensus 155 ~~L~~~g~~~~~ 166 (179)
T 3f6q_A 155 ERAEKMGQNLNR 166 (179)
T ss_dssp HHHHHTTCCCSC
T ss_pred HHHHHhhcCccc
Confidence 888888887663
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.8e-28 Score=227.80 Aligned_cols=179 Identities=13% Similarity=0.026 Sum_probs=159.3
Q ss_pred HHHHHHhcChHHHHHHHHHhccc--ccccCCCCCchhHHHHHHHcCcHH----HHHhhh-hhhccCCCCchHHhhhc---
Q 014273 142 LIYACAAFQITELVSYFQCLLLI--LAENAPVEDVIPILVAALHCQLNR----LHSCCI-QRIARSNLDNVCLEKEL--- 211 (427)
Q Consensus 142 lL~~A~~~~~~~l~~~ll~~g~~--i~~~~~~~~~~t~L~~A~~~~~~~----Ll~~g~-~~~~~~~~g~t~L~~a~--- 211 (427)
.+|.|+..+..+.++.+++.+.+ +|.++ .+|.||||+|+..|+.+ |++.|+ +++.++..|.||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d--~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVVNIAD--SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHHTCCC--TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCcCCC--CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 36777778888888988888777 55444 45599999999999977 777887 89999999999999999
Q ss_pred --ChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCC
Q 014273 212 --PDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCN 285 (427)
Q Consensus 212 --~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~ 285 (427)
..+..++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+
T Consensus 157 ~~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~ 228 (276)
T 4hbd_A 157 LKTQDDIETVLQLF-----RLGNINAKA---SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGH 228 (276)
T ss_dssp CCSHHHHHHHHHHH-----HHSCTTCCC---TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hhhhhhHHHHHHHH-----HcCCCcccc---CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 789999999999 778777776 788999999999999999999999999 4 47789999999999999
Q ss_pred HHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 014273 286 PKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG 330 (427)
Q Consensus 286 ~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~G 330 (427)
.+++++|++..|+++|.+|..|+||||+|+..|+.+++++|++++
T Consensus 229 ~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999434999999999999999999999999999999874
No 67
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=2.8e-28 Score=213.75 Aligned_cols=151 Identities=15% Similarity=0.092 Sum_probs=141.3
Q ss_pred CCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCch
Q 014273 171 VEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVR 246 (427)
Q Consensus 171 ~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t 246 (427)
+..|.||||+|+..|+.+ |++.+++++.++..|.||||+|+..++.+++++|+ +.|++++.. +..|.|
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t 103 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL-----SKGSNVNTK---DFSGKT 103 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HHTCCTTCC---CTTSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHH-----HCCCCCCCC---CCCCCc
Confidence 344599999999999866 88889999999999999999999999999999999 789999888 889999
Q ss_pred HHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHH
Q 014273 247 RIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAV 322 (427)
Q Consensus 247 ~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~ 322 (427)
|||+|+..|+.+++++|+++| + .|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 999999999999999999999 4 4678999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHhCC
Q 014273 323 LETLLSKG 330 (427)
Q Consensus 323 v~~Ll~~G 330 (427)
+++|+++|
T Consensus 183 v~~Ll~~~ 190 (192)
T 2rfm_A 183 IKIFTEVR 190 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999875
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=3.6e-28 Score=208.05 Aligned_cols=153 Identities=13% Similarity=-0.009 Sum_probs=142.2
Q ss_pred CchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 173 DVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 173 ~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
.+.||||.|+..|+.+ |++.+.+++.++..|.||||+|+..++.++++.|+ +.|++++.. +..|.|||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L 73 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-----QNGADPQLL---GKGRESAL 73 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTCCCHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHH-----HcCCCCCCc---CCCCCcHH
Confidence 4689999999999977 67778889999999999999999999999999999 789999988 78999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHH
Q 014273 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~ 324 (427)
|+|+..|+.+++++|+++| + .|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999998 3 4678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCC
Q 014273 325 TLLSKGACAS 334 (427)
Q Consensus 325 ~Ll~~Gadvn 334 (427)
+|+++++++.
T Consensus 153 ~L~~~~~~~~ 162 (167)
T 3v31_A 153 VIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999987644
No 69
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.5e-27 Score=204.80 Aligned_cols=149 Identities=18% Similarity=0.204 Sum_probs=135.2
Q ss_pred CchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 173 DVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 173 ~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
.+.++|+.|+..|+.+ |+++|++++.++..|.||||+|+..++.+++++|+ +.|++++.. +..|.|||
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L 84 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLL-----KNGADVNAV---DHAGMTPL 84 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTSCCHH
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-----HcCCCCCcc---CCCCCCHH
Confidence 3477888888888766 66777778888888999999999999999999999 789999888 88999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHH
Q 014273 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~ 324 (427)
|+|+..|+.+++++|+++| + .|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++
T Consensus 85 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~ 163 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDNGNEDLAE 163 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHHHHH
Confidence 9999999999999999999 3 4678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCC
Q 014273 325 TLLSKG 330 (427)
Q Consensus 325 ~Ll~~G 330 (427)
+|+++|
T Consensus 164 ~L~~~G 169 (169)
T 2y1l_E 164 ILQKLN 169 (169)
T ss_dssp HHHTC-
T ss_pred HHHHcC
Confidence 999987
No 70
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.2e-27 Score=202.39 Aligned_cols=149 Identities=15% Similarity=0.109 Sum_probs=137.3
Q ss_pred CchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHH
Q 014273 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALH 278 (427)
Q Consensus 203 g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh 278 (427)
+.||||.|+..|+.+.++.|+.. .+.+++.. +..|.||||+ +..|+.+++++|++.| + .|..|+||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~----~~~~~~~~---~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 73 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR----ELVHPDAL---NRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVH 73 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT----TCCCTTCC---CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHh----hCcCcccc---CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 57899999999999999999932 14577777 8889999999 9999999999999999 3 4678999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhH
Q 014273 279 YAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIE 358 (427)
Q Consensus 279 ~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~ 358 (427)
+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+...++.
T Consensus 74 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999998 99999999999999999999999999999999 9999999999999999999999888887
Q ss_pred HHh
Q 014273 359 ASK 361 (427)
Q Consensus 359 ~~~ 361 (427)
+.+
T Consensus 152 Ll~ 154 (156)
T 1bd8_A 152 LQG 154 (156)
T ss_dssp HHT
T ss_pred HHh
Confidence 765
No 71
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=6.2e-31 Score=237.56 Aligned_cols=193 Identities=10% Similarity=-0.050 Sum_probs=144.8
Q ss_pred HHHHHhcccccccCC-CCCchhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhccccc
Q 014273 156 SYFQCLLLILAENAP-VEDVIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQES 230 (427)
Q Consensus 156 ~~ll~~g~~i~~~~~-~~~~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ 230 (427)
+.|+++|.+.+..+. ..++.||||+|+..|+.+ |++.|++++.++..|.||||+|+..++.+++++|+ +.
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll-----~~ 76 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLI-----TA 76 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-----HC
Confidence 456777777765443 335688888888888866 66777888888888888888888888888888888 77
Q ss_pred ccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---C-CCCchHHHHH--HHcCCHHHHHHHHHcCCCCCcCC
Q 014273 231 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDAFALHYA--AAYCNPKVFKEVLNMGLADLNLK 303 (427)
Q Consensus 231 ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d-~~g~t~Lh~A--~~~g~~~~v~~Ll~~~~advn~~ 303 (427)
|++++.. |..|.||||+|+..|+.+++++|++.| ++ + ..|+||||+| +..|+.+++++|++.| +++|.+
T Consensus 77 ga~~n~~---d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~~~~~ 152 (229)
T 2vge_A 77 GANVNSP---DSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE-QSMGLM 152 (229)
T ss_dssp TCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HHTTTS
T ss_pred CCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CCcccc
Confidence 8888877 678888888888888888888888888 33 2 5788888888 8888888888888888 888888
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHhhCCCcchhHHH
Q 014273 304 DARGRTVLHVAARRKEPAVLETLLSKGAC--ASETTSDGRTAVAICRRMTRRKDYIEAS 360 (427)
Q Consensus 304 d~~g~TpLh~A~~~g~~~~v~~Ll~~Gad--vn~~d~~g~tpL~~A~~~~~~~~i~~~~ 360 (427)
|..|.||+|.++..+. .++|++.|++ ++.+|..|+||||+|+..|+...+....
T Consensus 153 ~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 153 NSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp GGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred cCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 8888888886554432 3567788887 6778888888888888888777665433
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.6e-27 Score=206.57 Aligned_cols=158 Identities=13% Similarity=0.072 Sum_probs=143.0
Q ss_pred chhHHHHHHHcCcHH----HHHh-hhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 174 VIPILVAALHCQLNR----LHSC-CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll~~-g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
+.++|+.|+..|+.+ |++. +.+++.++..|.||||+|+..++.+++++|+ +.|++++.. +..|.|||
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L 76 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI-----MRGARINVM---NRGDDTPL 76 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTCCCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHH-----HcCCCCCCc---CCCCCCHH
Confidence 478889999999877 3343 4567888899999999999999999999999 889999988 88999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHH
Q 014273 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~ 324 (427)
|+|+..|+.+++++|+++| + .|..|.||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++.++++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~ 155 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAPLRELLRE 155 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999 3 4678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCC
Q 014273 325 TLLSKGACASETTSDG 340 (427)
Q Consensus 325 ~Ll~~Gadvn~~d~~g 340 (427)
+|+++|++++..+..+
T Consensus 156 ~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 156 RAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHHTTCCCSCBCCCC
T ss_pred HHHHhhcCcccCCccc
Confidence 9999999999877654
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.6e-28 Score=223.32 Aligned_cols=168 Identities=12% Similarity=0.019 Sum_probs=108.1
Q ss_pred chhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHH
Q 014273 174 VIPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh 249 (427)
|.||||.|+..+..+ |+++|++++.. ..|.||||.|+..++.++++.|+ +.|++++.. |..|.||||
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll-----~~g~~~~~~---d~~g~t~L~ 75 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRII-----YEVDDPSLP---NDEGITALH 75 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHT-----STTSSCCCC---CTTSCCHHH
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHH-----HcCCCCCCc---CCCCCCHHH
Confidence 477788777777654 66777777654 56778888888888888888887 777777777 677888888
Q ss_pred HHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC-cHHHHH--HHcCCHHH
Q 014273 250 KALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGR-TVLHVA--ARRKEPAV 322 (427)
Q Consensus 250 ~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~-TpLh~A--~~~g~~~~ 322 (427)
+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|+++| ++++.++..|. ||||+| +..|+.++
T Consensus 76 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~ 154 (239)
T 1ycs_B 76 NAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQC 154 (239)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHHHhhhccHHH
Confidence 888888888888888877 3 3567788888888888888888888877 88888877766 888887 67777888
Q ss_pred HHHHHhCCCCCCCC---------CCCCCCHHHHHHhhC
Q 014273 323 LETLLSKGACASET---------TSDGRTAVAICRRMT 351 (427)
Q Consensus 323 v~~Ll~~Gadvn~~---------d~~g~tpL~~A~~~~ 351 (427)
+++|+++|++++.. +..+.+|++++.+.|
T Consensus 155 ~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 155 SQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp HHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred HHHHHHhhhcccccccceEEEEeccCCCCCCcccccCC
Confidence 88888888777765 455777777776654
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.4e-27 Score=216.92 Aligned_cols=157 Identities=18% Similarity=0.155 Sum_probs=115.0
Q ss_pred CCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchH
Q 014273 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFA 276 (427)
Q Consensus 201 ~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~ 276 (427)
..|.||||.|+..+..+.++.|+ ++|++++. +..|.||||.|+..|+.+++++|++.| + .|..|+||
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll-----~~g~~~~~----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~ 73 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERI-----AHGMRVKF----NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITA 73 (239)
T ss_dssp -------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCH
T ss_pred ccccccCchhhhhhhHHHHHHHh-----ccCCCccc----CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 46899999999999999999999 88999985 357899999999999999999999998 4 36789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC-CHHHHH--HhhCCC
Q 014273 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGR-TAVAIC--RRMTRR 353 (427)
Q Consensus 277 Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~-tpL~~A--~~~~~~ 353 (427)
||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+.
T Consensus 74 L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccH
Confidence 99999999999999999998 99999999999999999999999999999999999999998887 999999 778889
Q ss_pred cchhHHHhcCCCcc
Q 014273 354 KDYIEASKQGQETN 367 (427)
Q Consensus 354 ~~i~~~~~~g~~~~ 367 (427)
..++.+...|..+.
T Consensus 153 ~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 153 QCSQFLYGVQEKMG 166 (239)
T ss_dssp CHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhccc
Confidence 99999888776544
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=1.6e-26 Score=194.99 Aligned_cols=142 Identities=15% Similarity=0.131 Sum_probs=127.7
Q ss_pred hhHHHHHHHcCcHH----HHHhhhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHH
Q 014273 175 IPILVAALHCQLNR----LHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHK 250 (427)
Q Consensus 175 ~t~L~~A~~~~~~~----Ll~~g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~ 250 (427)
.++|+.|+..|+.+ |++.|.+++ .+..|.||||+|+..++.+++++|+ +.|++++.. +..|.||||+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~ 73 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-----RAGVSRDAR---TKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHH-----TTTCCTTCC---CTTCCCHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH-----HcCCCCCCC---CCCCCCHHHH
Confidence 67788888888766 555666554 4678999999999999999999999 889999888 8899999999
Q ss_pred HHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHH
Q 014273 251 ALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETL 326 (427)
Q Consensus 251 A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~L 326 (427)
|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 74 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 74 AASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999 4 4678999999999999999999999998 99999999999999999999999999987
No 76
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=4e-27 Score=194.61 Aligned_cols=129 Identities=18% Similarity=0.088 Sum_probs=121.5
Q ss_pred ccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC
Q 014273 231 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDAR 306 (427)
Q Consensus 231 ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~ 306 (427)
+++++.. +..|.||||+|+..|+.+++++|+++| + .|..|+||||+|+. |+.+++++|+++| +++|.+|..
T Consensus 2 ~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHML---GGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPA 76 (136)
T ss_dssp CCCCSCC---CCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTT
T ss_pred CCCccCC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCC
Confidence 4577777 889999999999999999999999999 3 46789999999999 9999999999998 999999999
Q ss_pred -CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCC
Q 014273 307 -GRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (427)
Q Consensus 307 -g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~ 364 (427)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|.
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999888775
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=4e-26 Score=192.91 Aligned_cols=145 Identities=17% Similarity=0.129 Sum_probs=132.1
Q ss_pred chhHHHHHHHcCcHHHH----Hh-hhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHH
Q 014273 174 VIPILVAALHCQLNRLH----SC-CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (427)
Q Consensus 174 ~~t~L~~A~~~~~~~Ll----~~-g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~L 248 (427)
+.|||+.|+..|+.+.+ +. +.+++.++..|.||||+ +..++.++++.|+ +.|++++.. |..|.|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L 72 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELL-----KQGASPNVQ---DTSGTSPV 72 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH-----HTTCCTTCC---CTTSCCHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHH-----HCCCCCCCc---CCCCCCHH
Confidence 47899999999997744 44 23778889999999999 9999999999999 889999988 88999999
Q ss_pred HHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHH
Q 014273 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (427)
Q Consensus 249 h~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~ 324 (427)
|+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|++. ++++.+|..|+||||+|+..|+.++++
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 73 HDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999999 3 467899999999999999999999987 899999999999999999999999999
Q ss_pred HHHhC
Q 014273 325 TLLSK 329 (427)
Q Consensus 325 ~Ll~~ 329 (427)
+|+++
T Consensus 151 ~Ll~~ 155 (156)
T 1bd8_A 151 ILQGH 155 (156)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99975
No 78
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.6e-28 Score=221.71 Aligned_cols=173 Identities=10% Similarity=0.027 Sum_probs=141.9
Q ss_pred HHHHhhhhhhcc---CCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHH
Q 014273 188 RLHSCCIQRIAR---SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLL 264 (427)
Q Consensus 188 ~Ll~~g~~~~~~---~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll 264 (427)
.|++++++.+.. +..+.||||+|+..|+.++++.|+ +.|++++.. |..|.||||+|+..|+.+++++|+
T Consensus 3 ~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll-----~~g~~~~~~---d~~g~tpLh~A~~~g~~~~v~~Ll 74 (229)
T 2vge_A 3 SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAV-----KEMNDPSQP---NEEGITALHNAICGANYSIVDFLI 74 (229)
T ss_dssp -------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHH-----HHSSCTTCC---CTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHH-----hcCCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHH
Confidence 467788776654 346778899999999999999999 779999887 889999999999999999999999
Q ss_pred HcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCcHHHHH--HHcCCHHHHHHHHhCCCCCCCCC
Q 014273 265 NEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKD-ARGRTVLHVA--ARRKEPAVLETLLSKGACASETT 337 (427)
Q Consensus 265 ~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d-~~g~TpLh~A--~~~g~~~~v~~Ll~~Gadvn~~d 337 (427)
+.| + .|..|+||||+|+..|+.+++++|++.| ++++.++ ..|+||||+| +..|+.+++++|+++|++++.+|
T Consensus 75 ~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 75 TAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHG-AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 999 4 4678999999999999999999999998 9999997 5999999999 99999999999999999999999
Q ss_pred CCCCCHHHHHHhhC-------CCcc--hhHHHhcCCCccch
Q 014273 338 SDGRTAVAICRRMT-------RRKD--YIEASKQGQETNKD 369 (427)
Q Consensus 338 ~~g~tpL~~A~~~~-------~~~~--i~~~~~~g~~~~~~ 369 (427)
..|.||++.++..+ .+++ ++..+..|.||++.
T Consensus 154 ~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~ 194 (229)
T 2vge_A 154 SGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWW 194 (229)
T ss_dssp GGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEE
T ss_pred CCchHHHHHHhhccccccCccccccccccccCCCcccHHHH
Confidence 99999998655433 2333 44555556666544
No 79
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=2.8e-27 Score=200.32 Aligned_cols=140 Identities=19% Similarity=0.118 Sum_probs=112.8
Q ss_pred ccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCC
Q 014273 198 ARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDD 273 (427)
Q Consensus 198 ~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g 273 (427)
..+..|.||||+|+..++.++++.|+ +.|++++.. +..|.||||+|+ .|+.+++++|+++| + .|..|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g 77 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALL-----EAGANPNAP---NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPAT 77 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHH-----TTTCCTTCC---CSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTT
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHH-----HcCCCCCCC---CCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCC
Confidence 45678999999999999999999999 889999988 789999999985 89999999999999 4 46788
Q ss_pred ch-HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 014273 274 AF-ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAIC 347 (427)
Q Consensus 274 ~t-~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A 347 (427)
+| |||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 78 ~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 78 LTRPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CcHHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 98 999999999999999999998 99999999999999999999999999999999999999999999998754
No 80
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=8.6e-27 Score=199.04 Aligned_cols=150 Identities=19% Similarity=0.140 Sum_probs=134.1
Q ss_pred CCchhHHHHHHHcCcHHHHHhh-----hhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCch
Q 014273 172 EDVIPILVAALHCQLNRLHSCC-----IQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVR 246 (427)
Q Consensus 172 ~~~~t~L~~A~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t 246 (427)
..+.|+|+.|+..|+.+.++.. .+++..+..|.||||+|+..++.+++++|+ +.|++++.. +..|.|
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t 77 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-----QHGADVHAK---DKGGLV 77 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTSCC
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH-----hcCCCCCcc---CCCCCC
Confidence 3458999999999998865544 345567778899999999999999999999 889999988 789999
Q ss_pred HHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHH
Q 014273 247 RIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAV 322 (427)
Q Consensus 247 ~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~ 322 (427)
|||+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+. |+.++
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred HHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHhc-CChHH
Confidence 999999999999999999999 3 4678999999999999999999999998 9999999999999999877 99999
Q ss_pred HHHHHhCCC
Q 014273 323 LETLLSKGA 331 (427)
Q Consensus 323 v~~Ll~~Ga 331 (427)
+++|+++||
T Consensus 156 ~~~L~~~gA 164 (165)
T 3twr_A 156 QDLLRGDAA 164 (165)
T ss_dssp HHHHHTC--
T ss_pred HHHHhhccc
Confidence 999999986
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=9e-27 Score=192.50 Aligned_cols=130 Identities=17% Similarity=0.102 Sum_probs=122.3
Q ss_pred hhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---
Q 014273 193 CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E--- 268 (427)
Q Consensus 193 g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~--- 268 (427)
+++++.++..|.||||+|+..++.++++.|+ +.|++++.. +..|.||||+|+. |+.+++++|+++| +
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~ 72 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLL-----EAGADPNAL---NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC 72 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHH-----HTTCCTTCC---CTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHH-----HcCCCcCCc---CCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC
Confidence 3577889999999999999999999999999 789999988 8899999999999 9999999999999 4
Q ss_pred CCCC-CchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 014273 269 VTLD-DAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC 332 (427)
Q Consensus 269 ~d~~-g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gad 332 (427)
.|.. |+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3567 999999999999999999999998 99999999999999999999999999999999986
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=5.3e-27 Score=204.55 Aligned_cols=150 Identities=12% Similarity=0.061 Sum_probs=130.5
Q ss_pred CchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCH----HHHHHHHHcC-CC---CCCCc
Q 014273 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDF----ELLNLLLNEY-EV---TLDDA 274 (427)
Q Consensus 203 g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~----~~v~~Ll~~g-~~---d~~g~ 274 (427)
+.++|+.|+..|+.+.++.++ . .+++..+ +..|+||||+|+.+|+. +++++|+++| ++ |..|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~-----~--~~~~~~~--~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~ 76 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELF-----E--KGYEDKE--SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGT 76 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHH-----H--HSSSCHH--HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCC
T ss_pred cccHHHHHHHcCCHHHHHHHH-----h--cCccccc--ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCC
Confidence 467899999999999988887 2 3455541 36799999999999975 5999999999 44 67899
Q ss_pred hHHHHHHHcCC------HHHHHHHHHcCCCCCcCCCCCCC-cHHHHHHHcC-----CHHHHHHHHh-CCCCCCCCCCCCC
Q 014273 275 FALHYAAAYCN------PKVFKEVLNMGLADLNLKDARGR-TVLHVAARRK-----EPAVLETLLS-KGACASETTSDGR 341 (427)
Q Consensus 275 t~Lh~A~~~g~------~~~v~~Ll~~~~advn~~d~~g~-TpLh~A~~~g-----~~~~v~~Ll~-~Gadvn~~d~~g~ 341 (427)
||||+|+..|+ .+++++|+++| +|+|.+|..|+ ||||+|+..+ +.+++++|++ +|+|+|.+|..|+
T Consensus 77 TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~ 155 (186)
T 3t8k_A 77 TLFFPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL 155 (186)
T ss_dssp CTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSC
T ss_pred cHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCC
Confidence 99999999987 57899999998 99999999999 9999999954 4569999999 9999999999999
Q ss_pred CHHHHHHhhCCCcchhHHHhc
Q 014273 342 TAVAICRRMTRRKDYIEASKQ 362 (427)
Q Consensus 342 tpL~~A~~~~~~~~i~~~~~~ 362 (427)
||||+|++.++...++.+.+.
T Consensus 156 TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 156 TALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp CHHHHHHTTTCHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHH
Confidence 999999999998888877754
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.7e-25 Score=184.80 Aligned_cols=122 Identities=23% Similarity=0.172 Sum_probs=114.8
Q ss_pred CccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHH
Q 014273 241 HEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAAR 316 (427)
Q Consensus 241 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~ 316 (427)
...|.||||+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHH
Confidence 567899999999999999999999999 4 3678999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcC
Q 014273 317 RKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQG 363 (427)
Q Consensus 317 ~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g 363 (427)
.|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999888766
No 84
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.1e-26 Score=189.41 Aligned_cols=127 Identities=20% Similarity=0.140 Sum_probs=111.4
Q ss_pred ccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC
Q 014273 231 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDAR 306 (427)
Q Consensus 231 ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~ 306 (427)
|+|+ .. |..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|+++| ++++.+|..
T Consensus 1 G~d~-~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FT---NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQ 75 (137)
T ss_dssp ---C-CC---CTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGG
T ss_pred CCCC-Cc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCC
Confidence 4566 34 889999999999999999999999999 4 4678999999999999999999999998 999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhc
Q 014273 307 GRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQ 362 (427)
Q Consensus 307 g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~ 362 (427)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+....+..+.+.
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 99999999999999999999999999999999999999999877665555544443
No 85
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=2.8e-27 Score=228.37 Aligned_cols=188 Identities=11% Similarity=-0.046 Sum_probs=150.7
Q ss_pred HHHHHHh-cChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHHHHHhhhhhh-------ccCCCCchHHhhhcCh
Q 014273 142 LIYACAA-FQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRLHSCCIQRI-------ARSNLDNVCLEKELPD 213 (427)
Q Consensus 142 lL~~A~~-~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~Ll~~g~~~~-------~~~~~g~t~L~~a~~~ 213 (427)
.+++|.. ++.++++++++++|.+. .||||+|+..|+.++++..++.. ..+..|.||||+|+..
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~~---------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIKS---------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCCH---------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCc---------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc
Confidence 3555555 67889999999887654 69999999999988655554332 2345678999999999
Q ss_pred hcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C-----CCCCCchHHHHHH-HcCCH
Q 014273 214 EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E-----VTLDDAFALHYAA-AYCNP 286 (427)
Q Consensus 214 ~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~-----~d~~g~t~Lh~A~-~~g~~ 286 (427)
|+.+++++|+ ++|+++...+..+.. .||||+|+..|+.+++++|+++| + +|..|+||||+|+ ..|+.
T Consensus 139 G~~eiv~~Ll-----~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~ 212 (376)
T 2aja_A 139 GHLHVLNRLC-----ELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHH 212 (376)
T ss_dssp TCHHHHHHHH-----HSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred CCHHHHHHHH-----hCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCH
Confidence 9999999999 778763322211223 89999999999999999999999 5 5677999999999 99999
Q ss_pred HHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcch
Q 014273 287 KVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDY 356 (427)
Q Consensus 287 ~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i 356 (427)
+++++|++.| + .|.||||+|+..|+.+++++|+++|++++.++ ++++.|+..|+...+
T Consensus 213 eiv~~Ll~~g-a-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 213 NVINFLLDCP-V-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLV 270 (376)
T ss_dssp HHHHHHTTSH-H-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCS
T ss_pred HHHHHHHhCC-C-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhh
Confidence 9999999966 4 28899999999999999999999999988665 478888888877654
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.5e-24 Score=175.77 Aligned_cols=122 Identities=30% Similarity=0.367 Sum_probs=116.1
Q ss_pred cCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcC
Q 014273 243 KRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (427)
Q Consensus 243 ~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g 318 (427)
+|.||||+|+..|+.+++++|+++| + .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Confidence 4899999999999999999999998 3 4678999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCC
Q 014273 319 EPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQE 365 (427)
Q Consensus 319 ~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~ 365 (427)
+.+++++|+++|++++.+|..|.||||+|+..++...++.+.+.|..
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999988863
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=2.7e-25 Score=188.08 Aligned_cols=126 Identities=20% Similarity=0.112 Sum_probs=114.2
Q ss_pred CccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCc-HHHHHH
Q 014273 241 HEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRT-VLHVAA 315 (427)
Q Consensus 241 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~T-pLh~A~ 315 (427)
+..|.||||+|+..|+.+++++|+++| + .|..|+||||+|+ .|+.+++++|+++| +++|.+|..|+| |||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHH
Confidence 778999999999999999999999999 3 4678999999985 89999999999998 999999999999 999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccc
Q 014273 316 RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNK 368 (427)
Q Consensus 316 ~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~ 368 (427)
..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|..+..
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999988888888888877653
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.3e-24 Score=174.77 Aligned_cols=122 Identities=30% Similarity=0.358 Sum_probs=115.6
Q ss_pred CCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHH
Q 014273 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFAL 277 (427)
Q Consensus 202 ~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~L 277 (427)
+|.||||.|+..++.++++.|+ +.|++++.. +..|.||||+|+..++.+++++|++.| + .|..|.|||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-----~~~~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l 72 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLL-----EAGADVNAK---DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHH-----HHTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCccHHHHHHHcCcHHHHHHHH-----HcCCCCCCc---CCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHH
Confidence 4899999999999999999999 778899888 789999999999999999999999999 3 467899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 014273 278 HYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC 332 (427)
Q Consensus 278 h~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gad 332 (427)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 73 ~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 73 HLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999998 99999999999999999999999999999999986
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=3e-24 Score=177.24 Aligned_cols=122 Identities=20% Similarity=0.215 Sum_probs=114.0
Q ss_pred CCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCch
Q 014273 200 SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAF 275 (427)
Q Consensus 200 ~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t 275 (427)
...+.||||+|+..++.++++.|+ +.|++++.. |..|.||||+|+..|+.+++++|+++| + .|..|.|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 82 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILM-----ANGADVNAK---DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFT 82 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHH-----HTTCCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred cccccHHHHHHHHhCCHHHHHHHH-----HcCCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 456899999999999999999999 789999888 889999999999999999999999999 4 4678999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 014273 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG 330 (427)
Q Consensus 276 ~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~G 330 (427)
|||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999998 999999999999999999999999999999987
No 90
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=3.8e-24 Score=173.36 Aligned_cols=108 Identities=25% Similarity=0.234 Sum_probs=100.6
Q ss_pred CccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHH
Q 014273 241 HEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAAR 316 (427)
Q Consensus 241 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~ 316 (427)
+..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHH
Confidence 567899999999999999999999998 3 4678999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHh
Q 014273 317 RKEPAVLETLLSKGACASETTSDGRTAVAICRR 349 (427)
Q Consensus 317 ~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~ 349 (427)
.|+.+++++|+++|++++.+|..|+||||+|..
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999999953
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=2.8e-25 Score=193.61 Aligned_cols=155 Identities=15% Similarity=0.092 Sum_probs=129.4
Q ss_pred hhHHHHHHHcCcHHHHHhh--hhhhccC-CCCchHHhhhcChhcH----HHHHHHHHhcccccccCcccCCCCCccCchH
Q 014273 175 IPILVAALHCQLNRLHSCC--IQRIARS-NLDNVCLEKELPDEVS----SEIKSLRVKSNQESEANIKEVDPMHEKRVRR 247 (427)
Q Consensus 175 ~t~L~~A~~~~~~~Ll~~g--~~~~~~~-~~g~t~L~~a~~~~~~----~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~ 247 (427)
.++|+.|+..|..+.+... .+++.++ ..|.||||+|+..++. +++++|+ +.|+++|.. +..|+||
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-----~~Gadvn~~---d~~g~Tp 78 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLI-----NKGADIKSR---TKEGTTL 78 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHH-----HTTCCSSCC---CTTCCCT
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHH-----HCCCCCCCC---CCCCCcH
Confidence 5678888888887733332 2334444 6799999999998864 5899998 889999999 8899999
Q ss_pred HHHHHhcCC------HHHHHHHHHcC-CC---CCCCc-hHHHHHHHcC-----CHHHHHHHHH-cCCCCCcCCCCCCCcH
Q 014273 248 IHKALDSDD------FELLNLLLNEY-EV---TLDDA-FALHYAAAYC-----NPKVFKEVLN-MGLADLNLKDARGRTV 310 (427)
Q Consensus 248 Lh~A~~~~~------~~~v~~Ll~~g-~~---d~~g~-t~Lh~A~~~g-----~~~~v~~Ll~-~~~advn~~d~~g~Tp 310 (427)
||+|+..++ .+++++|+++| ++ |..|+ ||||+|+..+ +.+++++|++ +| +|+|.+|..|+||
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-ad~~~~d~~G~Tp 157 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-LQLLIKDKWGLTA 157 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-CCTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-CCCcccCCCCCCH
Confidence 999999987 68899999999 44 56788 9999999954 3569999999 77 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 014273 311 LHVAARRKEPAVLETLLSKGACASETTS 338 (427)
Q Consensus 311 Lh~A~~~g~~~~v~~Ll~~Gadvn~~d~ 338 (427)
||+|+..|+.+++++|.++..+.+.++.
T Consensus 158 L~~A~~~~~~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999988777766653
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=7.8e-24 Score=198.77 Aligned_cols=141 Identities=16% Similarity=0.144 Sum_probs=120.0
Q ss_pred CCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCC---CCCccCchHHHHHHhc---CCHHHHHHHHHcC-C---CC
Q 014273 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVD---PMHEKRVRRIHKALDS---DDFELLNLLLNEY-E---VT 270 (427)
Q Consensus 201 ~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~---~~~~~g~t~Lh~A~~~---~~~~~v~~Ll~~g-~---~d 270 (427)
..+.++|+.|+..+..+.++.|+ +.|++++... ..+..|.||||+|+.. |+.+++++|+++| + .|
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll-----~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d 223 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAF-----ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA 223 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHH-----HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCC
T ss_pred CchHHHHhhhhhccCHHHHHHHH-----hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCC
Confidence 34567899999999999999998 7788988720 0278899999999997 8999999999999 4 46
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhh
Q 014273 271 LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRM 350 (427)
Q Consensus 271 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~ 350 (427)
..|+||||+|+..|+.+++++||++| ++++.+|..|+||||+|+..|+.+++++|+++|++ .|.||||+|++.
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSW 296 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhc
Confidence 78999999999999999999999998 99999999999999999999999999999999987 589999999998
Q ss_pred CCC
Q 014273 351 TRR 353 (427)
Q Consensus 351 ~~~ 353 (427)
|+.
T Consensus 297 g~~ 299 (301)
T 2b0o_E 297 VIS 299 (301)
T ss_dssp ---
T ss_pred CCc
Confidence 864
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=2.6e-24 Score=177.74 Aligned_cols=130 Identities=15% Similarity=0.118 Sum_probs=114.0
Q ss_pred hhhhhccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---
Q 014273 193 CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E--- 268 (427)
Q Consensus 193 g~~~~~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~--- 268 (427)
|+|+ .++..|.||||+|+..++.++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|+++| +
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 71 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLL-----QNGSDPNVK---DHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHH-----HTTCCSCCC---CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHH-----HcCCCCCcC---CCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC
Confidence 5666 68899999999999999999999999 789999888 889999999999999999999999999 3
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 014273 269 VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC 332 (427)
Q Consensus 269 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gad 332 (427)
.|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..+..+++++|.+.+..
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 3667999999999999999999999998 99999999999999999999999999888876543
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=7.3e-24 Score=184.25 Aligned_cols=111 Identities=28% Similarity=0.336 Sum_probs=104.5
Q ss_pred CccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCcHHHHHH
Q 014273 241 HEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKD-ARGRTVLHVAA 315 (427)
Q Consensus 241 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d-~~g~TpLh~A~ 315 (427)
+..|.||||+|+..|+.+++++|++ | + .|..|+||||+|+..|+.+++++|+++| +++|.+| ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 5688999999999999999999999 6 3 4678999999999999999999999998 9999998 89999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCC
Q 014273 316 RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRR 353 (427)
Q Consensus 316 ~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~ 353 (427)
..|+.+++++|+++|++++.+|..|+||||+|++.++.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 99999999999999999999999999999999987644
No 95
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=8.5e-26 Score=217.95 Aligned_cols=202 Identities=10% Similarity=-0.004 Sum_probs=157.9
Q ss_pred HHHHHHHhcChHHHHHHHHHhccccccc-CCCCCchhHHHHHHHcCcHH----HHHhhhh---hhccCCCCchHHhhhcC
Q 014273 141 ELIYACAAFQITELVSYFQCLLLILAEN-APVEDVIPILVAALHCQLNR----LHSCCIQ---RIARSNLDNVCLEKELP 212 (427)
Q Consensus 141 ~lL~~A~~~~~~~l~~~ll~~g~~i~~~-~~~~~~~t~L~~A~~~~~~~----Ll~~g~~---~~~~~~~g~t~L~~a~~ 212 (427)
++||+|+..|..+++++|+++|...... ..+..+.||||+|+..|+.+ |+++|++ .+..+.. .||||+|+.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~ 172 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE 172 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH
Confidence 7899999999999999999998732111 12234589999999999988 6667753 2222223 999999999
Q ss_pred hhcHHHHHHHHHhcccccccCccc--CCCCCccCchHHHHHH-hcCCHHHHHHHHHcCCCCCCCchHHHHHHHcCCHHHH
Q 014273 213 DEVSSEIKSLRVKSNQESEANIKE--VDPMHEKRVRRIHKAL-DSDDFELLNLLLNEYEVTLDDAFALHYAAAYCNPKVF 289 (427)
Q Consensus 213 ~~~~~~~~~L~~~~~~~~ga~~~~--~~~~~~~g~t~Lh~A~-~~~~~~~v~~Ll~~g~~d~~g~t~Lh~A~~~g~~~~v 289 (427)
.|+.+++++|+ ++|++++. . |..|.||||+|+ ..|+.+++++|++.|. .|.||||+|+.+|+.+++
T Consensus 173 ~G~~eiv~~Ll-----~~ga~~~~~~~---d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga---~~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 173 NGHLHVLNRLC-----ELAPTEATAMI---QAENYYAFRWAAVGRGHHNVINFLLDCPV---MLAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp TTCHHHHHHHH-----HSCGGGHHHHH---HHHHHHHHHHHHSTTCCHHHHHHHTTSHH---HHHHHHHCTTTTTTTTHH
T ss_pred CCCHHHHHHHH-----HcCCccchhcc---CCCCCCHHHHHHHHCCCHHHHHHHHhCCC---ccchHHHHHHHCCCHHHH
Confidence 99999999999 88999887 6 778999999999 9999999999999772 389999999999999999
Q ss_pred HHHHHcCCCCCcCCCCCCCcHHHHHHHcCC---------------------------HHHHHHHHhC---------CCCC
Q 014273 290 KEVLNMGLADLNLKDARGRTVLHVAARRKE---------------------------PAVLETLLSK---------GACA 333 (427)
Q Consensus 290 ~~Ll~~~~advn~~d~~g~TpLh~A~~~g~---------------------------~~~v~~Ll~~---------Gadv 333 (427)
++|++.| ++++..|. ++++|+..|+ .+.+++|++. |+++
T Consensus 242 ~lL~~~g-a~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~ 316 (376)
T 2aja_A 242 PFIARHV-NRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIP 316 (376)
T ss_dssp HHHHHHH-HHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSST
T ss_pred HHHHhcC-cccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCC
Confidence 9999998 88766543 3334443333 4456666653 4444
Q ss_pred CCCCCCCCCHHHHHHhhCCCcchhHHHhcC
Q 014273 334 SETTSDGRTAVAICRRMTRRKDYIEASKQG 363 (427)
Q Consensus 334 n~~d~~g~tpL~~A~~~~~~~~i~~~~~~g 363 (427)
| .+.||||+|++.|+...++.+.+.|
T Consensus 317 n----~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 317 G----DANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp T----CCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred C----CccHHHHHHHHcCcHHHHHHHHcCh
Confidence 3 5668999999999999999998754
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.1e-23 Score=188.91 Aligned_cols=127 Identities=17% Similarity=0.188 Sum_probs=110.9
Q ss_pred CccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHH
Q 014273 241 HEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAAR 316 (427)
Q Consensus 241 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~ 316 (427)
+..|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|++.+|+++|.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 668999999999999999999999999 3 467899999999999999999999999449999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCcc
Q 014273 317 RKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 317 ~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~ 367 (427)
.|+.+++++|+++|++++.+|..|+||||+|+..++...+..+...|....
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 999999999999999999999999999999999888888888777776544
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.3e-23 Score=188.48 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=110.8
Q ss_pred ccCCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHc-C-C---CCCC
Q 014273 198 ARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNE-Y-E---VTLD 272 (427)
Q Consensus 198 ~~~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~-g-~---~d~~ 272 (427)
..+..|.||||+|+..++.++++.|+ +.|++++.. |..|.||||+|+..|+.+++++|++. | + .|..
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-----~~g~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~ 139 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECL-----DNRVGVNGL---DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL 139 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHH-----HTTCCTTCC---CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT
T ss_pred ccccccccccccccccCcHHHHHHHH-----hCCCCcccc---CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC
Confidence 34677899999999999999999999 789999988 78999999999999999999999998 6 3 4778
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Q 014273 273 DAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGR 341 (427)
Q Consensus 273 g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~ 341 (427)
|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.++++.|++.|++.+.++..|+
T Consensus 140 g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 140 GDTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 999999999999999999999998 99999999999999999999999999999999999988776554
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1.2e-22 Score=184.97 Aligned_cols=120 Identities=26% Similarity=0.293 Sum_probs=108.7
Q ss_pred CccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-CCCCcHHHHHH
Q 014273 241 HEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKD-ARGRTVLHVAA 315 (427)
Q Consensus 241 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d-~~g~TpLh~A~ 315 (427)
+..|.||||+|+..|+.+++++|++ | + .|..|+||||+|+..|+.+++++|+++| +++|.+| ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 4579999999999999999999999 6 3 4678999999999999999999999998 9999998 88999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccch
Q 014273 316 RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKD 369 (427)
Q Consensus 316 ~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~~ 369 (427)
..|+.+++++|+++|++++.+|..|+||||+|+..++. ..+.+|++.
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~-------~~~~~~l~~ 166 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-------TPKGNPMQF 166 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT-------CCCSSHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc-------cCCCCHHHH
Confidence 99999999999999999999999999999999975433 345666654
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=7.5e-22 Score=183.12 Aligned_cols=123 Identities=17% Similarity=0.209 Sum_probs=114.9
Q ss_pred cCchHHHHHHhcCCHHHHHHHHHcC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCc
Q 014273 243 KRVRRIHKALDSDDFELLNLLLNEY-EV---------TLDDAFALHYAAAY---CNPKVFKEVLNMGLADLNLKDARGRT 309 (427)
Q Consensus 243 ~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---------d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~advn~~d~~g~T 309 (427)
...++|+.|+..|+.+.++.+++.| ++ |..|+||||+|+.. |+.+++++|+++| +++|.+|..|+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCC
Confidence 4568999999999999999999998 42 56799999999999 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCc
Q 014273 310 VLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (427)
Q Consensus 310 pLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~ 366 (427)
|||+|+..|+.+++++|+++|||++.+|..|+||||+|+..|+...++.+.+.|...
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999999887643
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=7.8e-23 Score=177.69 Aligned_cols=136 Identities=20% Similarity=0.227 Sum_probs=120.6
Q ss_pred CCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---C-CCCc
Q 014273 200 SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDA 274 (427)
Q Consensus 200 ~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d-~~g~ 274 (427)
+..|.||||+|+..++.++++.|+ + |++++.. |..|.||||+|+..|+.+++++|+++| ++ + ..|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll-----~-~~~~~~~---d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~ 111 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLL-----E-DRDVDAV---DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGL 111 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHT-----T-TSCTTCC---CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH-----h-cCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 356899999999999999999999 6 8888887 889999999999999999999999999 44 4 6799
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCc
Q 014273 275 FALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRK 354 (427)
Q Consensus 275 t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~ 354 (427)
||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++. ..+.|||++|+..|+..
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~ 173 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEK 173 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHH
T ss_pred CHHHHHHhcCcHHHHHHHHHcC-CCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHH
Confidence 9999999999999999999998 99999999999999999975432 45789999999998888
Q ss_pred chhHHHhc
Q 014273 355 DYIEASKQ 362 (427)
Q Consensus 355 ~i~~~~~~ 362 (427)
.++.+.++
T Consensus 174 i~~~L~~~ 181 (183)
T 3deo_A 174 VINVLEGQ 181 (183)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 77776543
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=1.4e-22 Score=184.61 Aligned_cols=136 Identities=21% Similarity=0.227 Sum_probs=122.9
Q ss_pred CCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---C-CCCch
Q 014273 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDAF 275 (427)
Q Consensus 201 ~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d-~~g~t 275 (427)
..|.||||+|+..++.++++.|+ + |+++|.. |..|.||||+|+..|+.+++++|+++| ++ + ..|+|
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll-----~-~~~~~~~---d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t 113 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLL-----E-DRDVDAV---DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTT-----T-TCCTTCB---CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHH-----c-CCCCCCc---CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCC
Confidence 46899999999999999999998 6 8899888 889999999999999999999999999 44 4 67999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcc
Q 014273 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKD 355 (427)
Q Consensus 276 ~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~ 355 (427)
|||+|+..|+.+++++|+++| +++|.+|..|+||||+|+..++ +..+.||||+|+..|+...
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~i 175 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKV 175 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHH
Confidence 999999999999999999998 9999999999999999986432 2578999999999999888
Q ss_pred hhHHHhcC
Q 014273 356 YIEASKQG 363 (427)
Q Consensus 356 i~~~~~~g 363 (427)
++.+...+
T Consensus 176 v~~L~~~~ 183 (244)
T 3ui2_A 176 INVLEGQV 183 (244)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 88887753
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=5.3e-22 Score=152.34 Aligned_cols=90 Identities=34% Similarity=0.413 Sum_probs=50.9
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCC
Q 014273 273 DAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTR 352 (427)
Q Consensus 273 g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~ 352 (427)
|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 455555555555555555555555 5555555555555555555555555555555555555555555555555555555
Q ss_pred CcchhHHHhcC
Q 014273 353 RKDYIEASKQG 363 (427)
Q Consensus 353 ~~~i~~~~~~g 363 (427)
...++.+.+.|
T Consensus 81 ~~~~~~Ll~~g 91 (93)
T 1n0q_A 81 LEVVKLLLEAG 91 (93)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 55555555544
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=3.1e-22 Score=162.02 Aligned_cols=110 Identities=19% Similarity=0.203 Sum_probs=99.5
Q ss_pred CCCCchHHhhhcChhcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCch
Q 014273 200 SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAF 275 (427)
Q Consensus 200 ~~~g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t 275 (427)
+..|.||||+|+..++.++++.|+ +.|++++.. +..|.||||+|+..|+.+++++|++.| + .|..|+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll-----~~~~~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 75 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYV-----AKGEDVNRT---LEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHIT 75 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHH-----HTTCCTTSC---CTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHH-----HcCCCcCcc---CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 457899999999999999999999 788999888 889999999999999999999999999 4 4778999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcC
Q 014273 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (427)
Q Consensus 276 ~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g 318 (427)
|||+|+..|+.+++++|+++| ++++.+|.+|+||||+|+..+
T Consensus 76 pL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 76 PLLSAVYEGHVSCVKLLLSKG-ADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHhCCHH
Confidence 999999999999999999998 999999999999999994433
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.4e-21 Score=149.88 Aligned_cols=89 Identities=36% Similarity=0.458 Sum_probs=83.7
Q ss_pred cCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcC
Q 014273 243 KRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (427)
Q Consensus 243 ~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g 318 (427)
+|+||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999 4 4678999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q 014273 319 EPAVLETLLSKGAC 332 (427)
Q Consensus 319 ~~~~v~~Ll~~Gad 332 (427)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=3.7e-22 Score=159.53 Aligned_cols=104 Identities=23% Similarity=0.268 Sum_probs=96.4
Q ss_pred CCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHH
Q 014273 240 MHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAA 315 (427)
Q Consensus 240 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~ 315 (427)
.|..|.||||+|+..|+.+++++|+++| + .|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHH
Confidence 3889999999999999999999999998 3 4678999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCCCCCCHH
Q 014273 316 RRKEPAVLETLLSKGACASETTSDGRTAV 344 (427)
Q Consensus 316 ~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL 344 (427)
..|+.+++++|+++|+++|.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999884
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=2.3e-21 Score=194.77 Aligned_cols=132 Identities=17% Similarity=0.177 Sum_probs=112.7
Q ss_pred CchHHhhhcChhcHHHHHHHHHhcccccccCcccC---CCCCccCchHHHHHHh---cCCHHHHHHHHHcC-C---CCCC
Q 014273 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEV---DPMHEKRVRRIHKALD---SDDFELLNLLLNEY-E---VTLD 272 (427)
Q Consensus 203 g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~---~~~~~~g~t~Lh~A~~---~~~~~~v~~Ll~~g-~---~d~~ 272 (427)
..+.||.|+..++.+.++.|+ +.|+++|.. ...+..|.||||+|+. .|+.+++++|+++| + .|..
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll-----~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~ 206 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAF-----ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD 206 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHH-----HTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSS
T ss_pred cHHHHHHHHhccCHHHHHHHH-----hhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCC
Confidence 447899999999999999999 889998865 1236789999999976 89999999999999 4 4678
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 014273 273 DAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDG 340 (427)
Q Consensus 273 g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g 340 (427)
|+||||+|+..|+.+++++||++| +|+|.+|.+|+||||+|+..|+.+++++|+++||+++.....+
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~ 273 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHV 273 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCccee
Confidence 999999999999999999999998 9999999999999999999999999999999999999743333
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=2e-21 Score=186.71 Aligned_cols=146 Identities=18% Similarity=0.173 Sum_probs=95.9
Q ss_pred cCCCCchHHhhhcCh-hcHHHHHHHHHhcccccccCcccCCCCCccCchHHHHHHhcCCHHHHHHHHHcC-CC---CCCC
Q 014273 199 RSNLDNVCLEKELPD-EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDD 273 (427)
Q Consensus 199 ~~~~g~t~L~~a~~~-~~~~~~~~L~~~~~~~~ga~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---d~~g 273 (427)
....+.|+||.|+.. ++.++++.|+ +.|+++|..+. +..|.||||+|+..|+.+++++|+++| ++ |..|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL-----~~Gadvn~~~~-~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G 268 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADAL-----AHGADVNWVNG-GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAG 268 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHH-----HTTCCTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHH-----HcCCCCCcccc-ccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 334566788888887 8888888887 67788877631 267788888888888888888888887 33 5677
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCCCCCCCCCCCHHHHHHhh
Q 014273 274 AFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG---ACASETTSDGRTAVAICRRM 350 (427)
Q Consensus 274 ~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~G---advn~~d~~g~tpL~~A~~~ 350 (427)
+||||+|+..|+.+++++||++| ++++.+|.+|+||||+|+..|+.+++++|+++| ++....+..+.|+++++...
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 88888888888888888888877 888888888888888888888888888888665 33445556677777777654
Q ss_pred C
Q 014273 351 T 351 (427)
Q Consensus 351 ~ 351 (427)
.
T Consensus 348 ~ 348 (368)
T 3jue_A 348 S 348 (368)
T ss_dssp -
T ss_pred H
Confidence 4
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=3.1e-21 Score=193.81 Aligned_cols=124 Identities=22% Similarity=0.255 Sum_probs=114.0
Q ss_pred CchHHHHHHhcCCHHHHHHHHHcC-CC---------CCCCchHHHHHHH---cCCHHHHHHHHHcCCCCCcCCCCCCCcH
Q 014273 244 RVRRIHKALDSDDFELLNLLLNEY-EV---------TLDDAFALHYAAA---YCNPKVFKEVLNMGLADLNLKDARGRTV 310 (427)
Q Consensus 244 g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---------d~~g~t~Lh~A~~---~g~~~~v~~Ll~~~~advn~~d~~g~Tp 310 (427)
..+.||.|+..|+.+.++.|++.| ++ |..|+||||+|+. .|+.+++++||++| +|+|.+|.+|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 347899999999999999999999 43 5679999999976 89999999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCCCccc
Q 014273 311 LHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNK 368 (427)
Q Consensus 311 Lh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~~~~~ 368 (427)
||+|+..|+.+++++|+++|||+|.+|..|+||||+|+..|+...++.+.+.|..+..
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999977654
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=1.9e-20 Score=175.71 Aligned_cols=120 Identities=22% Similarity=0.269 Sum_probs=110.9
Q ss_pred cCchHHHHHHhcCCHHHHHHHHHcC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCc
Q 014273 243 KRVRRIHKALDSDDFELLNLLLNEY-EV---------TLDDAFALHYAAAY---CNPKVFKEVLNMGLADLNLKDARGRT 309 (427)
Q Consensus 243 ~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~---------d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~advn~~d~~g~T 309 (427)
.+.++|+.|+..|+.+.++.|++.| ++ +..|+||||+|+.. |+.+++++|++.| +++|.+|.+|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCC
Confidence 3568899999999999999999998 43 56899999999997 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcC
Q 014273 310 VLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQG 363 (427)
Q Consensus 310 pLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g 363 (427)
|||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...++.+.+.|
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g 282 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQ 282 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999988888877643
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=6e-21 Score=177.05 Aligned_cols=125 Identities=20% Similarity=0.208 Sum_probs=112.8
Q ss_pred CchHHhhhcChhcHHHHHHHHHhcccccccCcccC---CCCCccCchHHHHHHhc---CCHHHHHHHHHcC-C---CCCC
Q 014273 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEV---DPMHEKRVRRIHKALDS---DDFELLNLLLNEY-E---VTLD 272 (427)
Q Consensus 203 g~t~L~~a~~~~~~~~~~~L~~~~~~~~ga~~~~~---~~~~~~g~t~Lh~A~~~---~~~~~v~~Ll~~g-~---~d~~ 272 (427)
..++|+.|+..+..+.+..++ ..|++++.. +..+..|.||||+|+.. |+.+++++|+++| + .|..
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll-----~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~ 204 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAY-----ADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGK 204 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH-----HTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTT
T ss_pred hhhhhhhHhhhcccHHHHHHH-----HhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCC
Confidence 457899999999999999888 778886542 23478899999999999 8999999999999 4 4678
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 014273 273 DAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACA 333 (427)
Q Consensus 273 g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadv 333 (427)
|+||||+|+..|+.+++++|+++| +|+|.+|.+|+||||+|+..|+.+++++|+++|++.
T Consensus 205 g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 205 GSTALHYCCLTDNAECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999988 999999999999999999999999999999999863
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=4.5e-21 Score=184.29 Aligned_cols=123 Identities=20% Similarity=0.158 Sum_probs=114.6
Q ss_pred CccCchHHHHHHhc-CCHHHHHHHHHcC-CC---C--CCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHH
Q 014273 241 HEKRVRRIHKALDS-DDFELLNLLLNEY-EV---T--LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHV 313 (427)
Q Consensus 241 ~~~g~t~Lh~A~~~-~~~~~v~~Ll~~g-~~---d--~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~ 313 (427)
+..+.|+||.|+.. |+.+++++|+++| ++ + ..|.||||+|+..|+.+++++|+++| +++|.+|..|+||||+
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh~ 274 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHH 274 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHH
Confidence 34567999999999 9999999999999 44 3 67999999999999999999999998 9999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHhhCCCcchhHHHhcCC
Q 014273 314 AARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (427)
Q Consensus 314 A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~~~~~~~~i~~~~~~g~ 364 (427)
|+..|+.+++++|+++|++++.+|..|.||||+|+..++...+..+...|.
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999998887663
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=6.4e-20 Score=146.39 Aligned_cols=98 Identities=28% Similarity=0.391 Sum_probs=92.5
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHH
Q 014273 269 VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICR 348 (427)
Q Consensus 269 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A~ 348 (427)
.|.+|+||||+|+..|+.+++++|++.+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 5788999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCcchhHHHhcCCCcc
Q 014273 349 RMTRRKDYIEASKQGQETN 367 (427)
Q Consensus 349 ~~~~~~~i~~~~~~g~~~~ 367 (427)
..++...++.+.+.|..+.
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHH
T ss_pred HCCCHHHHHHHHHcCCCCC
Confidence 9998888888888887655
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=2.2e-19 Score=142.27 Aligned_cols=90 Identities=28% Similarity=0.227 Sum_probs=75.4
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 014273 268 EVTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAIC 347 (427)
Q Consensus 268 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~Gadvn~~d~~g~tpL~~A 347 (427)
..|.+|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 35677888888888888888888888887 88888888889999999988899999999988999888888889999999
Q ss_pred HhhCCCcchhH
Q 014273 348 RRMTRRKDYIE 358 (427)
Q Consensus 348 ~~~~~~~~i~~ 358 (427)
+..++...++.
T Consensus 98 ~~~~~~~~~~~ 108 (110)
T 2zgd_A 98 IDNGNEDLAEI 108 (110)
T ss_dssp HHHTCHHHHHH
T ss_pred HHcCCHHHHHH
Confidence 88887666654
No 114
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.74 E-value=1.8e-18 Score=148.47 Aligned_cols=147 Identities=20% Similarity=0.254 Sum_probs=113.2
Q ss_pred CCCCCCCCCcccCCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHH
Q 014273 21 WSTNQSTGPEICSDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAF 100 (427)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~ 100 (427)
|++.+..++..++.. +.+|||+|.|+|++|+|||+||++||+||++||.+.+.+ .. ...+...++.++.+
T Consensus 17 p~~~l~~~l~~l~~~-~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e----~~-----~~~i~l~~~~~~~f 86 (172)
T 3htm_A 17 PECRLADELGGLWEN-SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE----SK-----KNRVEINDVEPEVF 86 (172)
T ss_dssp CCCCHHHHHHHHHHH-TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCG----GG-----TTEEEECSSCHHHH
T ss_pred CHHHHHHHHHHHHhC-CCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccc----cC-----CCeEEecCCCHHHH
Confidence 334444455444544 899999999999999999999999999999999987543 21 11244456788999
Q ss_pred HHHHHHHhcCccCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHH
Q 014273 101 NDILLYLYTGMTKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVA 180 (427)
Q Consensus 101 ~~~l~~lytg~~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~ 180 (427)
..+++|+|+|.+...+.. +.+++..|..++++.+.+.+.+...... ...+....+.+
T Consensus 87 ~~~l~~~Yt~~~~~~~~~--------------------~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~~~~ 143 (172)
T 3htm_A 87 KEMMCFIYTGKAPNLDKM--------------------ADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILIL 143 (172)
T ss_dssp HHHHHHHHHSCCTTGGGT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHHTC---CTTTHHHHHHH
T ss_pred HHHHHHHhCCCCCCcHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence 999999999987643322 5578999999999999888877654322 44566889999
Q ss_pred HHHcCcHHHHHhhhhhhccC
Q 014273 181 ALHCQLNRLHSCCIQRIARS 200 (427)
Q Consensus 181 A~~~~~~~Ll~~g~~~~~~~ 200 (427)
|..++..+|.+.+.++..++
T Consensus 144 A~~~~~~~L~~~~~~~i~~~ 163 (172)
T 3htm_A 144 ADLHSADQLKTQAVDFINYH 163 (172)
T ss_dssp HHHTTCHHHHHHHHHHHHHT
T ss_pred HHHhCcHHHHHHHHHHHHHH
Confidence 99999999999998876654
No 115
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=1e-17 Score=132.49 Aligned_cols=86 Identities=21% Similarity=0.290 Sum_probs=80.4
Q ss_pred CCccCchHHHHHHhcCCHHHHHHHHHcC-C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCcHHHHHH
Q 014273 240 MHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAA 315 (427)
Q Consensus 240 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~---~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~advn~~d~~g~TpLh~A~ 315 (427)
.+.+|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHHHHH
Confidence 3789999999999999999999999999 4 4678999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHH
Q 014273 316 RRKEPAVLETL 326 (427)
Q Consensus 316 ~~g~~~~v~~L 326 (427)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 116
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.71 E-value=1.7e-18 Score=144.28 Aligned_cols=140 Identities=20% Similarity=0.257 Sum_probs=88.7
Q ss_pred CCCCCCCCCCCCcccCCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCH
Q 014273 18 PTCWSTNQSTGPEICSDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGF 97 (427)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~ 97 (427)
...|++.+..++..++.. +.+|||+|.|+|++|+|||+||++||+||++||.+.+.+ +. ...+...++.+
T Consensus 5 v~~p~~~l~~~l~~l~~~-~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e----~~-----~~~i~l~~~~~ 74 (145)
T 4eoz_A 5 VKVPECRLADELGGLWEN-SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE----SK-----KNRVEINDVEP 74 (145)
T ss_dssp CCCCCCCHHHHHHHHHHH-TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHH----HH-----HTEEEECSSCH
T ss_pred ccCChHHHHHHHHHHHhC-CCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcC----CC-----CceEEecCCCH
Confidence 344455555566555555 889999999999999999999999999999999976432 11 11244556788
Q ss_pred HHHHHHHHHHhcCccCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhH
Q 014273 98 EAFNDILLYLYTGMTKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPI 177 (427)
Q Consensus 98 ~~~~~~l~~lytg~~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~ 177 (427)
+.+..+++|+|+|.+...+.. +.+++..|..++++.+.+.+.+...... ..++....
T Consensus 75 ~~~~~~l~~~Y~~~~~~~~~~--------------------~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~ 131 (145)
T 4eoz_A 75 EVFKEMMCFIYTGKAPNLDKM--------------------ADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEI 131 (145)
T ss_dssp HHHHHHHHHHHHSCCTTGGGT--------------------HHHHHHHHHHTTCHHHHHHHHCC----------------
T ss_pred HHHHHHHHhhccCccCCcHHH--------------------HHHHHHHHHHhCHHHHHHHHHHHHHHhC---CHHHHHHH
Confidence 999999999999987643322 5578999999999999998887754332 33456778
Q ss_pred HHHHHHcCcHHHH
Q 014273 178 LVAALHCQLNRLH 190 (427)
Q Consensus 178 L~~A~~~~~~~Ll 190 (427)
+.+|..++..+|.
T Consensus 132 l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 132 LILADLHSADQLK 144 (145)
T ss_dssp -------------
T ss_pred HHHHHHhCHHHhc
Confidence 8888888876653
No 117
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.70 E-value=4.2e-17 Score=149.22 Aligned_cols=137 Identities=20% Similarity=0.302 Sum_probs=102.9
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|++|+|||+|||+|||||++||.+++.+. +.. ...++..++.++++..+++|+|||.+
T Consensus 25 l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~--e~~-----~~~i~l~~v~~~~f~~ll~~~Yt~~~ 97 (256)
T 3hve_A 25 FREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD--DGS-----TYKIELEGISVMVMREILDYIFSGQI 97 (256)
T ss_dssp CCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------------CEEECSSCCHHHHHHHHHHHHHSCC
T ss_pred HHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcc--cCC-----CCeEEeCCCCHHHHHHHHhhccCCCC
Confidence 56669999999999999999999999999999999999764310 111 11245556888999999999999998
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHHHHHh
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRLHSC 192 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~Ll~~ 192 (427)
...+.. +.+++.+|..++++++.+.+.+...... ..++....+.+|..++..+|.+.
T Consensus 98 ~i~~~~--------------------v~~ll~~A~~l~i~~l~~~c~~~L~~~l---~~~n~~~i~~~A~~~~~~~L~~~ 154 (256)
T 3hve_A 98 RLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFLEGCI---AAENCIGIRDFALHYCLHHVHYL 154 (256)
T ss_dssp CCC-CC--------------------HHHHHHHHHHHTCHHHHHHHHHHHHHTC---CSSTTHHHHHHHHHTTCHHHHHH
T ss_pred cccHhH--------------------HHHHHHHHHHHChHHHHHHHHHHHHhhC---CHhhHHHHHHHHHHcCcHHHHHH
Confidence 764433 5678999999999999888877754432 44567899999999999998888
Q ss_pred hhhhhcc
Q 014273 193 CIQRIAR 199 (427)
Q Consensus 193 g~~~~~~ 199 (427)
+.++..+
T Consensus 155 ~~~~i~~ 161 (256)
T 3hve_A 155 ATEYLET 161 (256)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8776543
No 118
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.70 E-value=4.1e-17 Score=128.82 Aligned_cols=99 Identities=19% Similarity=0.216 Sum_probs=77.8
Q ss_pred CCCCCCccceEEEEcC----eEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHh
Q 014273 33 SDPGEPWLDAEIVVEG----KSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLY 108 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~----~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~ly 108 (427)
++.++.+|||+|.|++ ++|+|||+|||+|||||++||.+.+.+ +... +...++.++.+..+++|+|
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e----~~~~------i~l~~~~~~~f~~~l~~iY 71 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAE----VKSE------IHIPDVEPAAFLILLKYMY 71 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC----------CCE------EEETTSCHHHHHHHHHHHH
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCccc----CCCe------EEeCCCCHHHHHHHHHHHc
Confidence 3455899999999997 999999999999999999999987544 2222 4445678889999999999
Q ss_pred cCccCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 109 TGMTKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 109 tg~~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
+|.+...+.. +.+++.+|..++.+.+.+.+.+.
T Consensus 72 t~~~~~~~~~--------------------~~~ll~~A~~~~~~~L~~~c~~~ 104 (109)
T 2vkp_A 72 SDEIDLEADT--------------------VLATLYAAKKYIVPALAKACVNF 104 (109)
T ss_dssp HCCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCccCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHH
Confidence 9988765433 56789999999999998887665
No 119
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.70 E-value=2.1e-17 Score=132.86 Aligned_cols=100 Identities=22% Similarity=0.275 Sum_probs=78.8
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|++|+|||+|||+|||||++||.+.+.++ .... +...++.++.+..+++|+|+|.+
T Consensus 19 l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~---~~~~------i~l~~~~~~~f~~ll~~~Yt~~~ 89 (120)
T 2if5_A 19 QRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD---QQNV------YEIDFVSAEALTALMDFAYTATL 89 (120)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC--------CCSE------EECCSSCHHHHHHHHHHHHHSCC
T ss_pred HHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc---CCce------EEeCCCCHHHHHHHHHHHcCCCC
Confidence 34458999999999999999999999999999999999875431 1122 44456788999999999999988
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
...+.. +.+++.+|..++++.+.+.+.+.
T Consensus 90 ~~~~~~--------------------~~~ll~~A~~~~i~~L~~~C~~~ 118 (120)
T 2if5_A 90 TVSTAN--------------------VGDILSAARLLEIPAVSHVCADL 118 (120)
T ss_dssp CCCGGG--------------------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHH
Confidence 764332 56789999999999998887654
No 120
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.70 E-value=1.9e-17 Score=132.81 Aligned_cols=97 Identities=22% Similarity=0.255 Sum_probs=80.6
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|++|+|||+|||+|||||++||.+++. .. +...++.++.+..+++|+|+|.+
T Consensus 18 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-------~~------i~l~~~~~~~f~~ll~~iYtg~~ 84 (119)
T 3b84_A 18 QREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGSG-------GS------VVLPAGFAEIFGLLLDFFYTGHL 84 (119)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTTC-------CC------EEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCCC-------Ce------EEeCCCCHHHHHHHHHHHcCCCC
Confidence 345589999999999999999999999999999999987631 12 34456778899999999999988
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhc
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g 162 (427)
...+.. +.+++.+|..++++++.+.+.+..
T Consensus 85 ~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l 114 (119)
T 3b84_A 85 ALTSGN--------------------RDQVLLAARELRVPEAVELCQSFK 114 (119)
T ss_dssp CCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred ccCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHH
Confidence 764433 457899999999999999887764
No 121
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.70 E-value=4.8e-17 Score=134.89 Aligned_cols=102 Identities=17% Similarity=0.301 Sum_probs=79.5
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|+.|+|||+|||+||+||++||.+.+.+.. ..... +...++.++.+..+++|+|+|.+
T Consensus 41 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e-~~~~~------I~l~~v~~~~f~~lL~fiYtg~~ 113 (144)
T 2ppi_A 41 FREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDD-GSTYK------IELEGISVMVMREILDYIFSGQI 113 (144)
T ss_dssp TTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------CCCE------EECCSSCHHHHHHHHHHHTTSCC
T ss_pred HHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCcccc-CCCcE------EEeCCCCHHHHHHHHHHHhCCCC
Confidence 556699999999999999999999999999999999998643210 01122 44556788999999999999998
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
...+.. +.+++.+|..++++.+.+.+.+.
T Consensus 114 ~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~ 142 (144)
T 2ppi_A 114 RLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEF 142 (144)
T ss_dssp CCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHH
Confidence 764333 56789999999999999888764
No 122
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.69 E-value=2e-17 Score=133.12 Aligned_cols=96 Identities=22% Similarity=0.323 Sum_probs=79.6
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|++|+|||+|||+|||||++||.+.. .. +...++.++.+..+++|+|+|.+
T Consensus 22 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~--------~~------i~l~~~~~~~f~~ll~~~Ytg~~ 87 (121)
T 1buo_A 22 MRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNS--------QH------YTLDFLSPKTFQQILEYAYTATL 87 (121)
T ss_dssp HHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSCC--------SE------EEECSSCHHHHHHHHHHHHHSCC
T ss_pred HHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCCC--------cE------EEeCCCCHHHHHHHHHhhcCCCc
Confidence 44558999999999999999999999999999999998641 12 34456788999999999999988
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhc
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g 162 (427)
...+.. +.+++.+|..++.+.+.+.+.+..
T Consensus 88 ~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~l 117 (121)
T 1buo_A 88 QAKAED--------------------LDDLLYAAEILEIEYLEEQCLKML 117 (121)
T ss_dssp CCCGGG--------------------HHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCHHH--------------------HHHHHHHHHHHCCHHHHHHHHHHH
Confidence 764433 567899999999999988876653
No 123
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.69 E-value=2.8e-17 Score=131.84 Aligned_cols=95 Identities=18% Similarity=0.321 Sum_probs=79.1
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|++|+|||+|||+||+||++||.+.. . .+....+.++.+..+++|+|||++
T Consensus 21 l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~--------~------~i~l~~~~~~~f~~ll~~~Ytg~~ 86 (119)
T 2q81_A 21 QRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK--------D------VVHLDISNAAGLGQVLEFMYTAKL 86 (119)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC--------S------GGGGGGCCHHHHHHHHHHHHHSCC
T ss_pred HHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------C------EEEeCCCCHHHHHHHHHHHcCCCC
Confidence 34558999999999999999999999999999999998741 1 234445788899999999999998
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
...+.+ +.+++.+|..++++++.+.+.+.
T Consensus 87 ~i~~~~--------------------~~~ll~~A~~l~i~~L~~~C~~~ 115 (119)
T 2q81_A 87 SLSPEN--------------------VDDVLAVATFLQMQDIITACHAL 115 (119)
T ss_dssp CCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHH
Confidence 765433 56789999999999999887664
No 124
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.68 E-value=5.7e-17 Score=131.72 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=81.5
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccC-CccCHHHHHHHHHHHhcCc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPH-GKVGFEAFNDILLYLYTGM 111 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~-~~v~~~~~~~~l~~lytg~ 111 (427)
++.++.+|||+|.|+|++|+|||+|||+|||||++||.+.+.+ .... +.. .++.++.+..+++|+|+|.
T Consensus 23 l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~------i~l~~~~~~~~f~~ll~~~Ytg~ 92 (127)
T 1r29_A 23 LRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR----NLSV------INLDPEINPEGFNILLDFMYTSR 92 (127)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT----TCSE------EECCTTSCHHHHHHHHHHHHHSC
T ss_pred HHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC----CCCE------EEeCCCCCHHHHHHHHHHHcCCC
Confidence 3445999999999999999999999999999999999987543 2223 344 5688899999999999998
Q ss_pred cCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 112 TKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 112 ~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
+...+.. +.+++.+|..+++..+.+.+.+.
T Consensus 93 ~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~ 122 (127)
T 1r29_A 93 LNLREGN--------------------IMAVMATAMYLQMEHVVDTCRKF 122 (127)
T ss_dssp CCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHH
Confidence 8764433 56789999999999998887665
No 125
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.68 E-value=5.5e-17 Score=129.56 Aligned_cols=98 Identities=17% Similarity=0.301 Sum_probs=79.3
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|++|+|||+|||+|||||++||.+.. ...+. ++..++.++.+..+++|+|+|.+
T Consensus 16 l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-------~~~i~----l~~~~~~~~~f~~ll~~~Yt~~~ 84 (116)
T 2vpk_A 16 QREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-------ENNVF----LDQSQVKADGFQKLLEFIYTGTL 84 (116)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-------CSCEE----CCTTTCCHHHHHHHHHHHHHSCC
T ss_pred HHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-------CCeEE----eecCCCCHHHHHHHHHHHcCCCc
Confidence 34458999999999999999999999999999999998761 11222 22236888999999999999988
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
...+.. +.+++.+|..++++.+.+.+.+.
T Consensus 85 ~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~ 113 (116)
T 2vpk_A 85 NLDSWN--------------------VKEIHQAADYLKVEEVVTKCKIK 113 (116)
T ss_dssp CCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHH
Confidence 764433 56789999999999998887765
No 126
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.68 E-value=4e-17 Score=133.96 Aligned_cols=98 Identities=21% Similarity=0.258 Sum_probs=79.7
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.||||+|.|+|++|+|||+|||+||+||++||.+.+. .. +...++.++.+..+++|+|+|++
T Consensus 19 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~-------~~------i~l~~~~~~~f~~lL~fiYtg~~ 85 (135)
T 2yy9_A 19 QREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGTG-------GS------VVLPAGFAEIFGLLLDFFYTGHL 85 (135)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------CC------EEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCCC-------Ce------EEeCCCCHHHHHHHHHHHhCCCC
Confidence 455589999999999999999999999999999999987631 12 44455778899999999999988
Q ss_pred CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhcc
Q 014273 113 KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLL 163 (427)
Q Consensus 113 ~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~ 163 (427)
...+.. +.+++.+|..+++..+.+.+.+...
T Consensus 86 ~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~l~ 116 (135)
T 2yy9_A 86 ALTSGN--------------------RDQVLLAAKELRVPEAVELCQSFQP 116 (135)
T ss_dssp CCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCCC
T ss_pred CCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 764433 5678999999999999999888753
No 127
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.67 E-value=3.9e-17 Score=153.93 Aligned_cols=146 Identities=21% Similarity=0.279 Sum_probs=110.8
Q ss_pred CCCCCCCCcccCCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHH
Q 014273 22 STNQSTGPEICSDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFN 101 (427)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~ 101 (427)
++.+..++..++.. +.+|||+|.|+|++|+|||+|||+|||||++||.+...++ .... +...++.++.|.
T Consensus 158 ~~~l~~~l~~l~~~-~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~---~~~~------i~l~~~~~~~f~ 227 (312)
T 3hqi_A 158 ECRLADELGGLWEN-SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNR------VEINDVEPEVFK 227 (312)
T ss_dssp CCCHHHHHHHHHHT-TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC--------CCSE------EEECSSCHHHHH
T ss_pred CchHHHHHHHHHhC-CCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc---CCce------EEecCCCHHHHH
Confidence 34444445454544 8899999999999999999999999999999999875431 1123 444567788999
Q ss_pred HHHHHHhcCccCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHH
Q 014273 102 DILLYLYTGMTKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAA 181 (427)
Q Consensus 102 ~~l~~lytg~~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A 181 (427)
.+|+|+|+|.+.... +.+..+|.+|..++++.+.+.+.+...... ...+....|.+|
T Consensus 228 ~~L~~iYt~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~---~~~n~~~~l~~A 284 (312)
T 3hqi_A 228 EMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILILA 284 (312)
T ss_dssp HHHHHHHHSCCTTHH--------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---CTTTHHHHHHHH
T ss_pred HHHHhhcCCCCCChH--------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHccC---CHHHHHHHHHHH
Confidence 999999998765422 236688999999999999988887764332 345678899999
Q ss_pred HHcCcHHHHHhhhhhhccC
Q 014273 182 LHCQLNRLHSCCIQRIARS 200 (427)
Q Consensus 182 ~~~~~~~Ll~~g~~~~~~~ 200 (427)
..++..+|.+.+.++...+
T Consensus 285 ~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 285 DLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHTTCHHHHHHHHHHHHHT
T ss_pred HHhCCHHHHHHHHHHHHHH
Confidence 9999999999998876653
No 128
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.66 E-value=7.6e-17 Score=132.87 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=81.7
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccC-CccCHHHHHHHHHHHhcCc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPH-GKVGFEAFNDILLYLYTGM 111 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~-~~v~~~~~~~~l~~lytg~ 111 (427)
++.++.+|||+|.|+|++|+|||+|||+||+||++||.+.+.+ . .. +.. ..+.++.+..+++|+|+|.
T Consensus 30 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e----~-~~------i~l~~~v~~~~~~~lL~~~Ytg~ 98 (138)
T 2z8h_A 30 QRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA----E-LT------VTLPEEVTVKGFEPLIQFAYTAK 98 (138)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT----T-EE------EECCTTSCHHHHHHHHHHHHHSC
T ss_pred HHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC----C-ce------EEeCCCCCHHHHHHHHHHhcCCC
Confidence 4455899999999999999999999999999999999987532 1 12 233 3688899999999999998
Q ss_pred cCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhcc
Q 014273 112 TKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLL 163 (427)
Q Consensus 112 ~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~ 163 (427)
+...+.. +.+++.+|..+++..+.+.+.+...
T Consensus 99 ~~i~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~ 130 (138)
T 2z8h_A 99 LILSKDN--------------------VDEVCRCVEFLSVHNIEESCFQFLK 130 (138)
T ss_dssp CCCCTTT--------------------HHHHHHHHHHHTCGGGHHHHHHHTT
T ss_pred cccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 8765433 5678999999999999888877643
No 129
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.65 E-value=4.8e-17 Score=150.77 Aligned_cols=141 Identities=16% Similarity=0.226 Sum_probs=107.3
Q ss_pred CCCCCCccceEEEEc---CeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhc
Q 014273 33 SDPGEPWLDAEIVVE---GKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYT 109 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~---~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lyt 109 (427)
++.++.+|||+|.|+ |++|+|||+|||+||+||++||.+++.++ ....+.++++....++.++++..++.|+||
T Consensus 26 l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~---~~~~i~l~~~~~~~~v~~~~f~~ll~~~Yt 102 (279)
T 3i3n_A 26 QRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES---RSGRVEMRKWSSEPGPEPDTVEAVIEYMYT 102 (279)
T ss_dssp HHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------EEECCCCSSTTCSCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc---cCCeEEeccccccCCCCHHHHHHHHHhhCc
Confidence 456699999999998 99999999999999999999999875441 223455554444447899999999999999
Q ss_pred CccCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhcccccccCCCCCchhHHHHHHHcCcHHH
Q 014273 110 GMTKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRL 189 (427)
Q Consensus 110 g~~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i~~~~~~~~~~t~L~~A~~~~~~~L 189 (427)
|.+...+.. +.+++.+|..+++..+.+.+.+...... ..++....+.+|..++..+|
T Consensus 103 g~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~c~~~L~~~l---~~~n~~~i~~~A~~~~~~~L 159 (279)
T 3i3n_A 103 GRIRVSTGS--------------------VHEVLELADRFLLIRLKEFCGEFLKKKL---HLSNCVAIHSLAHMYTLSQL 159 (279)
T ss_dssp SEEEEETTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHC---CTTTHHHHHHHHHHTTCHHH
T ss_pred CCcccCHHH--------------------HHHHHHHHHHHCcHHHHHHHHHHHHHcC---CcchHHHHHHHHHHcCcHHH
Confidence 987654332 5678999999999999888877754432 44567889999999999998
Q ss_pred HHhhhhhhcc
Q 014273 190 HSCCIQRIAR 199 (427)
Q Consensus 190 l~~g~~~~~~ 199 (427)
.+.+.++..+
T Consensus 160 ~~~~~~~i~~ 169 (279)
T 3i3n_A 160 ALKAADMIRR 169 (279)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776544
No 130
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.62 E-value=1.8e-16 Score=126.32 Aligned_cols=90 Identities=23% Similarity=0.390 Sum_probs=72.5
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCcc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMT 112 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~ 112 (427)
++.++.+|||+|.|+|+.|+|||+|||+||+||++||.+.. . .+...++.++.+..+++|+|+|++
T Consensus 25 ~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~~--------~------~i~l~~~~~~~f~~~l~~~Ytg~~ 90 (116)
T 3fkc_A 25 QRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVAG--------Q------VVELSFIRAEIFAEILNYIYSSKI 90 (116)
T ss_dssp HHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSCC--------S------EEEECSSCHHHHHHHHHHHTTSCC
T ss_pred HHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------C------EEEeCCCCHHHHHHHHHhhcCCCc
Confidence 44558999999999999999999999999999999998751 1 244456888999999999999987
Q ss_pred -CCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHH
Q 014273 113 -KESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVS 156 (427)
Q Consensus 113 -~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~ 156 (427)
...+.. +.+++.+|..++++.+.+
T Consensus 91 ~~~~~~~--------------------~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 91 VRVRSDL--------------------LDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CSCCHHH--------------------HHHHHHHHHHHTCHHHHT
T ss_pred CCCCHHH--------------------HHHHHHHHHHhCccccCc
Confidence 333222 457789999998877653
No 131
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.62 E-value=4.4e-17 Score=131.67 Aligned_cols=97 Identities=20% Similarity=0.272 Sum_probs=75.3
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccC-CccCHHHHHHHHHHHhcCc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPH-GKVGFEAFNDILLYLYTGM 111 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~-~~v~~~~~~~~l~~lytg~ 111 (427)
++.++.+|||+|.|+|++|+|||+|||+|||||++||.+.+.+ . .. +.. ..+.++.+..+++|+|+|+
T Consensus 23 l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e----~-~~------i~l~~~v~~~~f~~lL~~iYtg~ 91 (124)
T 2ihc_A 23 QRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG----E-LN------ITLPEEVTVKGFEPLIQFAYTAK 91 (124)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC-------C-EE------EECCTTSCHHHHHHHHHHHHHSE
T ss_pred HHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC----C-ce------EeecCCcCHHHHHHHHHHhcCCC
Confidence 3445899999999999999999999999999999999987432 1 12 233 3688899999999999998
Q ss_pred cCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHH
Q 014273 112 TKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (427)
Q Consensus 112 ~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~ 160 (427)
+...+.. +.+++.+|..++++.+.+.+.+
T Consensus 92 ~~i~~~~--------------------v~~ll~~A~~~~~~~L~~~C~~ 120 (124)
T 2ihc_A 92 LILSKEN--------------------VDEVCKCVEFLSVHNIEESCFQ 120 (124)
T ss_dssp EEEETTT--------------------HHHHHHHHHHHTBSSCCGGGGG
T ss_pred cccCHHH--------------------HHHHHHHHHHHCCHHHHHHHHH
Confidence 7654332 5678999999998877665543
No 132
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.61 E-value=1.8e-16 Score=126.68 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=77.5
Q ss_pred ccCCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcC
Q 014273 31 ICSDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTG 110 (427)
Q Consensus 31 ~~~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg 110 (427)
.+.|.++.||||+|.|+|++|+|||+|||++|+||++ . . ..+...++.++.|..+++|+|||
T Consensus 22 ~l~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----~--------~------~~i~l~~v~~~~f~~ll~fiYtg 83 (119)
T 3m5b_A 22 LAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR----R--------G------QWALGEGISPSTFAQLLNFVYGE 83 (119)
T ss_dssp HHHHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC----C--------E------EEECCSSCCHHHHHHHHHHHTTC
T ss_pred HHHHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc----C--------C------CEEEeCCCCHHHHHHHHHHHcCC
Confidence 3356679999999999999999999999999999984 0 0 12455678899999999999999
Q ss_pred ccCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhc
Q 014273 111 MTKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (427)
Q Consensus 111 ~~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g 162 (427)
++...... +.+++.+|..+++..+.+.+.+..
T Consensus 84 ~~~i~~~~--------------------v~~ll~aA~~l~i~~l~~~C~~~~ 115 (119)
T 3m5b_A 84 SVELQPGE--------------------LRPLQEAARALGVQSLEEACWRAR 115 (119)
T ss_dssp CEEECGGG--------------------HHHHHHHHHHTTCHHHHHHHHHHC
T ss_pred CcCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 88764433 567899999999999999887763
No 133
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.61 E-value=6.7e-17 Score=130.91 Aligned_cols=94 Identities=19% Similarity=0.255 Sum_probs=74.5
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCc-cCHHHHHHHHHHHhcCc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGK-VGFEAFNDILLYLYTGM 111 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~-v~~~~~~~~l~~lytg~ 111 (427)
++.++.+|||+|.|+|++|+|||+|||+||+||++||.+.+.+ ... +...+ +.++.+..+++|+|+|+
T Consensus 26 l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~------i~l~~~~~~~~f~~~l~~iYtg~ 94 (125)
T 3ohu_A 26 QRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-----DLV------VSLPEEVTARGFGPLLQFAYTAK 94 (125)
T ss_dssp HHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-----SCE------EECCTTCCHHHHHHHHHHHTTSE
T ss_pred HHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-----CcE------EEeCCCCCHHHHHHHHHhHcCCc
Confidence 4455899999999999999999999999999999999987432 122 34444 88899999999999998
Q ss_pred cCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHH
Q 014273 112 TKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSY 157 (427)
Q Consensus 112 ~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ 157 (427)
+...+.. +.+++.+|..+++..+.+.
T Consensus 95 ~~~~~~~--------------------v~~ll~~A~~l~i~~L~~~ 120 (125)
T 3ohu_A 95 LLLSREN--------------------IREVIRCAEFLRMHNLEDS 120 (125)
T ss_dssp EEECTTT--------------------HHHHHHHHHHHTBSSCTTS
T ss_pred eEECHHH--------------------HHHHHHHHHHhCCHHHHHH
Confidence 7664433 4567888888887766543
No 134
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.61 E-value=1.4e-16 Score=129.62 Aligned_cols=96 Identities=25% Similarity=0.371 Sum_probs=75.4
Q ss_pred CCCCCCccceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCC-ccCHHHHHHHHHHHhcCc
Q 014273 33 SDPGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHG-KVGFEAFNDILLYLYTGM 111 (427)
Q Consensus 33 ~~~~~~~~Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~-~v~~~~~~~~l~~lytg~ 111 (427)
++.++.+|||+|.|+|++|+|||+|||+||+||++||.+.. ... +... ++.++.+..+++|+|+|.
T Consensus 27 l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~~-------~~~------i~l~~~~~~~~f~~ll~~iYtg~ 93 (129)
T 3ga1_A 27 QRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNSR-------SAV------VELPAAVQPQSFQQILSFCYTGR 93 (129)
T ss_dssp HHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHCC-------CSE------EECCTTCCHHHHHHHHHHHHHSE
T ss_pred HHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCCC-------CCE------EEECCCCCHHHHHHHHHHHhCCc
Confidence 44558999999999999999999999999999999998761 112 3443 688899999999999998
Q ss_pred cCCCcccccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 112 TKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 112 ~~~~~~~~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
+...+.. +.+++.+|..+++..+.+.+.+.
T Consensus 94 ~~i~~~~--------------------~~~ll~~A~~~~i~~l~~~C~~~ 123 (129)
T 3ga1_A 94 LSMNVGD--------------------QDLLMYTAGFLQIQEIMEKGTEF 123 (129)
T ss_dssp EECCTTT--------------------HHHHHHHHHHTTBTTSSCC----
T ss_pred cccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHH
Confidence 8765443 45679999999988876655444
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.46 E-value=3.3e-07 Score=76.56 Aligned_cols=115 Identities=20% Similarity=0.216 Sum_probs=73.4
Q ss_pred eEEEE-cCeEEeeeeeehhccCHHHHHHhcc-CCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCCcccc
Q 014273 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNL-RNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEV 119 (427)
Q Consensus 42 v~~~v-~~~~~~~Hr~vLaarS~~F~~~f~~-~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~~~~~ 119 (427)
|+++. ||+.|++||.| |+.|+||++||.+ +... ++. ...+|...|....+..++.|.|+.+-...+...
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~---e~~-----~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~ 73 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDD---EGD-----DDPVPLPNVNAAILKKVIQWCTHHKDDPPPPED 73 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS--------------CEECTTSCHHHHHHHHHHHHHTTTCCC----
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcc---ccc-----CCCcCCCCccHHHHHHHHHHHHHcCcCCCCccc
Confidence 66764 79999999999 9999999999987 3220 111 123788889999999999999998754422211
Q ss_pred ccc----cccccccc--CCchhHHhhHHHHHHHHhcChHHHHHHHHHhcccc
Q 014273 120 SAC----VDDACVHV--SCPPTINYAVELIYACAAFQITELVSYFQCLLLIL 165 (427)
Q Consensus 120 ~~~----~~~~c~~~--~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i 165 (427)
... .+....++ ...-......+++.+|..+++..++.++.+..++.
T Consensus 74 ~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~ 125 (159)
T 2ast_A 74 DENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 125 (159)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 000 00000000 00111234568899999999999988887775554
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.19 E-value=3.9e-06 Score=63.70 Aligned_cols=59 Identities=14% Similarity=0.273 Sum_probs=44.1
Q ss_pred eEEEE-cCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHh
Q 014273 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLY 108 (427)
Q Consensus 42 v~~~v-~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~ly 108 (427)
|+++- ||++|++||.| |+.|+||++||.+... ..+. -.+.+|...+....+..+++|.|
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~--~~E~-----~~~~I~l~~V~~~iL~kViey~~ 63 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ--FAEN-----ETNEVNFREIPSHVLSKVCMYFT 63 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------------CEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCC--cccc-----CCCceECCCCCHHHHHHHHHHHH
Confidence 45554 69999999999 9999999999986321 1111 12347888899999999999999
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=97.74 E-value=6.8e-05 Score=60.94 Aligned_cols=111 Identities=17% Similarity=0.167 Sum_probs=72.2
Q ss_pred eEEEE-cCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCCccccc
Q 014273 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVS 120 (427)
Q Consensus 42 v~~~v-~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~~~~~~ 120 (427)
|+++. ||+.|.+||.+ |..|++|++||.... .+.+|...|....+..+++|.|+.+-...+....
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-------------~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 69 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-------------MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDD 69 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-------------CSSEECTTCCHHHHHHHHHHHHHHTTCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-------------CCceecCCcCHHHHHHHHHHHHHhccCCCccccc
Confidence 66666 69999999998 899999999998642 1137888899999999999999865433221100
Q ss_pred cc----ccccc-ccc-CCchhHHhhHHHHHHHHhcChHHHHHHHHHhccccc
Q 014273 121 AC----VDDAC-VHV-SCPPTINYAVELIYACAAFQITELVSYFQCLLLILA 166 (427)
Q Consensus 121 ~~----~~~~c-~~~-~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i~ 166 (427)
.. .+... |.. ...-......+++.+|..+++..++.++.+..++..
T Consensus 70 ~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~i 121 (141)
T 1fs1_B 70 ENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 121 (141)
T ss_dssp -----------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 00 00000 000 000112345588999999999999888877765553
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=97.20 E-value=7.8e-05 Score=62.03 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=47.0
Q ss_pred eEEEE-cCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCCccccc
Q 014273 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVS 120 (427)
Q Consensus 42 v~~~v-~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~~~~~~ 120 (427)
|++.. ||+.|.+||.+ |..|++|+.||..... .+.+|...|....+..++.|.|+..-...+....
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~------------~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 72 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV------------DNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEA 72 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------------CCTTSCHHHHHHHHHC--------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC------------CCceeCCcCcHHHHHHHHHHHHHcccCCCccccc
Confidence 56664 79999999998 8999999999976421 1137888899999999999999976432111100
Q ss_pred -----ccccccccccC--CchhHHhhHHHHHHHHhcChHHHHHHHHHhcccc
Q 014273 121 -----ACVDDACVHVS--CPPTINYAVELIYACAAFQITELVSYFQCLLLIL 165 (427)
Q Consensus 121 -----~~~~~~c~~~~--c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i 165 (427)
...+....++. -.-......+++.+|..+++..++.++.+..++.
T Consensus 73 ~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ 124 (160)
T 2p1m_A 73 VEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADM 124 (160)
T ss_dssp ----------------------------CHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 00000000000 0011123457789999999999988877776554
No 139
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=96.04 E-value=0.021 Score=43.67 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=65.4
Q ss_pred ceEEEEcCeEEeeeeeehhccC-HHHHHHhccCCCCC-CCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCCccc
Q 014273 41 DAEIVVEGKSVVVNRSILSERS-QFFHRLFNLRNDGS-VSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPE 118 (427)
Q Consensus 41 Dv~~~v~~~~~~~Hr~vLaarS-~~F~~~f~~~~~~~-~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~~~~ 118 (427)
=|+|.|+|+.|...+..|+... .+|.+||.+...-. .++.... -..+-....|..+|.|+.+|++..++..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~-------~fiDRdp~~F~~IL~~lr~g~l~~p~~~ 79 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGA-------YLIDRDPTYFGPVLNYLRHGKLVINKDL 79 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSC-------EEECSCHHHHHHHHHHHHHSCCCCCTTS
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCce-------EEecCChHHHHHHHHHhCCCeeCCCCCC
Confidence 3689999999999999998765 47888987542110 0000000 1124567799999999999987653322
Q ss_pred ccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHh
Q 014273 119 VSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (427)
Q Consensus 119 ~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~ 161 (427)
| ...++.-|..+++.++++.|.++
T Consensus 80 --------~-----------~~~l~~Ea~fy~l~~L~~~l~~~ 103 (107)
T 3drz_A 80 --------A-----------EEGVLEEAEFYNITSLIKLVKDK 103 (107)
T ss_dssp --------C-----------HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred --------C-----------HHHHHHHHHHCCCHHHHHHHHHH
Confidence 1 23458888999999999988664
No 140
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=95.98 E-value=0.011 Score=44.54 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=46.1
Q ss_pred eEEEE-cCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhc
Q 014273 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYT 109 (427)
Q Consensus 42 v~~~v-~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lyt 109 (427)
|+++- ||+.|.++|.+ |..|++++.||..+. + .. .+-+|...|....+..+++|.+.
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e----~~-----~~~Iplp~V~~~iL~kVieyc~~ 63 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R----ES-----KGRIELKQFDSHILEKAVEYLNY 63 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T----TC-----TTEEEETTSCHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c----cC-----CCceecCCcCHHHHHHHHHHHHH
Confidence 66666 79999999996 999999999998742 1 11 11378888999999999999977
No 141
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=95.78 E-value=0.01 Score=44.38 Aligned_cols=60 Identities=13% Similarity=0.251 Sum_probs=44.7
Q ss_pred eEEEE-cCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhc
Q 014273 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYT 109 (427)
Q Consensus 42 v~~~v-~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lyt 109 (427)
|+++- ||+.|.++|.+ |..|++++.||...... .+.. .+-+|...|....+..+++|.+.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~--~e~~-----~~~Ipl~~V~~~iL~kVieyc~~ 63 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQF--AENE-----TNEVNFREIPSHVLSKVCMYFTY 63 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------------CEEECSSCCHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCc--cccc-----CCceeCCCCCHHHHHHHHHHHHH
Confidence 55665 69999999996 99999999999863210 1111 12478889999999999999976
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=92.30 E-value=0.37 Score=39.96 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=70.0
Q ss_pred ceEEEE-cCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCCcccc
Q 014273 41 DAEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEV 119 (427)
Q Consensus 41 Dv~~~v-~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~~~~~ 119 (427)
-|+++- ||+.|.++|.+ |..|..++.|+.....+...+. -...+|...|....+..++.|.+.-+-...+...
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~-----~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~ 81 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDD-----DEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDED 81 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC----------------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCccccccc-----CCCceeeCCCCHHHHHHHHHHHHHcccCCCcccc
Confidence 355554 59999999997 8899999999985422100000 0124788889999999999999875433322210
Q ss_pred c---ccccccc-ccc-CCchhHHhhHHHHHHHHhcChHHHHHHHHHhcccc
Q 014273 120 S---ACVDDAC-VHV-SCPPTINYAVELIYACAAFQITELVSYFQCLLLIL 165 (427)
Q Consensus 120 ~---~~~~~~c-~~~-~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g~~i 165 (427)
. ....... |.. .-.-.-....+++.+|.++++..++.+.-+.-++.
T Consensus 82 ~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ 132 (169)
T 3v7d_A 82 DDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEM 132 (169)
T ss_dssp ------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 0 0000000 000 00011234558899999999999888876665554
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=91.30 E-value=1 Score=38.15 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=63.6
Q ss_pred ceEEEEcCeEEeeeeeehhccC-HHHHHHhccCCCCC-CCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCCccc
Q 014273 41 DAEIVVEGKSVVVNRSILSERS-QFFHRLFNLRNDGS-VSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPE 118 (427)
Q Consensus 41 Dv~~~v~~~~~~~Hr~vLaarS-~~F~~~f~~~~~~~-~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~~~~ 118 (427)
=|+|.|+|+.|..-|..|.... .+|..||.+...-. .++....+ ..+-....|..+|.|+-+|++..++..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~gey-------FIDRDP~~F~~ILnyLRtG~L~lP~~~ 85 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAY-------LIDRDPTYFGPVLNYLRHGKLVINKDL 85 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCE-------EECSCSTTHHHHHHHHHHSCCCCCTTS
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccE-------EecCChHHHHHHHHHhcCCccCCCCCC
Confidence 4679999999999999998654 37888987542110 01111111 112234489999999999987654322
Q ss_pred ccccccccccccCCchhHHhhHHHHHHHHhcChHHHHHHHHHhc
Q 014273 119 VSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (427)
Q Consensus 119 ~~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l~~~ll~~g 162 (427)
| ...++.-|..|++.++++.|.++.
T Consensus 86 --------~-----------~~~l~eEA~FygL~~Lv~~l~~~i 110 (202)
T 3drx_A 86 --------A-----------EEGVLEEAEFYNITSLIKLVKDKI 110 (202)
T ss_dssp --------C-----------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --------C-----------HHHHHHHHHHCCcHHHHHHHHHHH
Confidence 2 124688899999999998887654
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=89.78 E-value=0.39 Score=36.77 Aligned_cols=60 Identities=13% Similarity=0.282 Sum_probs=44.1
Q ss_pred eEEE-EcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhc
Q 014273 42 AEIV-VEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYT 109 (427)
Q Consensus 42 v~~~-v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lyt 109 (427)
|+++ .||+.|.+.|. +|..|+.++.|+..... ..+.. ..-+|...|....+..++.|.+.
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~--~~e~~-----~~~IplpnV~s~iL~kVieyc~~ 79 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQ--FAENE-----TNEVNFREIPSHVLSKVCMYFTY 79 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC---------------CEEECSSCCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCC--ccccc-----CCceeCCCCCHHHHHHHHHHHHH
Confidence 5666 36999999999 58999999999985321 00111 12478889999999999999976
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=58.46 E-value=6.1 Score=30.15 Aligned_cols=66 Identities=17% Similarity=0.085 Sum_probs=40.1
Q ss_pred eEEEEcCeEEeeeeeehhccCH-HHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCCc
Q 014273 42 AEIVVEGKSVVVNRSILSERSQ-FFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (427)
Q Consensus 42 v~~~v~~~~~~~Hr~vLaarS~-~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~~ 116 (427)
|+|.|+|+.|..-+..|..-.. .+.+||..... .+.....+ ..+-....|..+|.|+-+|++..++
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~--~~~~~g~~-------FiDRdp~~F~~ILnylR~G~l~~p~ 73 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLN--YDPVLNEY-------FFDRHPGVFAQIINYYRSGKLHYPT 73 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTT--EETTTTEE-------EECSCTTTHHHHHHHHHHSCBCCCS
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCC--CCCCCCcE-------EEecChHHHHHHHHHhcCCCCCCCC
Confidence 7899999999999999975432 23344443210 00010011 1123445899999999999876544
No 146
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=38.28 E-value=17 Score=26.77 Aligned_cols=85 Identities=12% Similarity=0.060 Sum_probs=47.3
Q ss_pred eEEEEcCeEEeeeeeehhccCH-HHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhc-CccCCCcccc
Q 014273 42 AEIVVEGKSVVVNRSILSERSQ-FFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYT-GMTKESPPEV 119 (427)
Q Consensus 42 v~~~v~~~~~~~Hr~vLaarS~-~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lyt-g~~~~~~~~~ 119 (427)
|+|.|+|+.|-..+..|..--. .+.+|+.....- ......+ ..+-....|..+|.|+-+ |++..++..
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~--~~~~~ey-------FiDRdp~~F~~ILnflR~~G~l~~p~~~- 72 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYY--DPLRNEY-------FFDRNRPSFDAILYFYQSGGRLRRPVNV- 72 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGE--ETTTTEE-------EECSCSTTHHHHHHHHHTTSCCCCCTTS-
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhcccccc--CCCceeE-------EEcCChHHHHHHHHHHhcCCcccCCCCC-
Confidence 6899999999999999953211 122233211000 0000010 012234489999999998 887654332
Q ss_pred cccccccccccCCchhHHhhHHHHHHHHhcChHHH
Q 014273 120 SACVDDACVHVSCPPTINYAVELIYACAAFQITEL 154 (427)
Q Consensus 120 ~~~~~~~c~~~~c~~~~~~~~~lL~~A~~~~~~~l 154 (427)
| ...++.-|..+++.+.
T Consensus 73 -------~-----------~~~~~~Ea~fy~i~~~ 89 (100)
T 1t1d_A 73 -------P-----------LDVFSEEIKFYELGEN 89 (100)
T ss_dssp -------C-----------HHHHHHHHHHTTCCHH
T ss_pred -------C-----------HHHHHHHHHHcCCCHH
Confidence 2 2245677777777654
No 147
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=36.56 E-value=33 Score=26.40 Aligned_cols=66 Identities=15% Similarity=0.048 Sum_probs=39.3
Q ss_pred ceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCC
Q 014273 41 DAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKES 115 (427)
Q Consensus 41 Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~ 115 (427)
=|+|.|+|+.|-.-+..|..... .||... + ......-+.=.-..+-....|..+|.|+-+|++..+
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~--~----~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~p 79 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGST--E----KEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYP 79 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSS--G----GGGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCCC
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceeccc--C----CcccccCCCCcEEEcCChHHHHHHHHHHhcCCCCCC
Confidence 47899999999999999964321 233321 0 000000000011123467799999999999987643
No 148
>2b19_A Neuropeptide K, NPK; helix, 3 10 helix, lipid induced conformation, DPC micelles; NMR {Synthetic}
Probab=35.24 E-value=25 Score=19.43 Aligned_cols=17 Identities=18% Similarity=0.096 Sum_probs=15.0
Q ss_pred hhccchhHHHHHHhhhh
Q 014273 406 YLEKKGDIYFLVLVHCL 422 (427)
Q Consensus 406 ~~e~r~~~~~~l~~~~~ 422 (427)
.+|+.+++.+.||-||-
T Consensus 5 siekqvallkalyghgq 21 (36)
T 2b19_A 5 SIEKQVALLKALYGHGQ 21 (36)
T ss_dssp GGGGGHHHHHHHHGGGH
T ss_pred hHHHHHHHHHHHhccCc
Confidence 57899999999999984
No 149
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=30.15 E-value=39 Score=26.56 Aligned_cols=66 Identities=15% Similarity=0.045 Sum_probs=39.3
Q ss_pred ceEEEEcCeEEeeeeeehhccCHHHHHHhccCCCCCCCCCCccccccCcccCCccCHHHHHHHHHHHhcCccCCC
Q 014273 41 DAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKES 115 (427)
Q Consensus 41 Dv~~~v~~~~~~~Hr~vLaarS~~F~~~f~~~~~~~~~~~~~~~~~~~li~~~~v~~~~~~~~l~~lytg~~~~~ 115 (427)
=|+|.|+|+.|-.-+..|...- ..||... + ......-+.=.-..+-....|..+|.|+-+|++..+
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~--~----~~~~~~~~~g~yFiDRdp~~F~~ILnflR~G~l~~p 101 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGST--E----KEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYP 101 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSG--G----GGGSEETTTTEEEECSCHHHHHHHHHHHHHSSBCCC
T ss_pred EEEEEECCEEEEeeHHHHhcCC---Ceeeccc--C----CcccccCCCCeEEEeCCcHHHHHHHHHHhcCCcCCC
Confidence 4789999999999999997432 2233321 0 000000000001123467799999999999987643
No 150
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=23.07 E-value=66 Score=18.90 Aligned_cols=18 Identities=22% Similarity=0.211 Sum_probs=14.1
Q ss_pred HHHHHhcCCHHHHHHHHH
Q 014273 248 IHKALDSDDFELLNLLLN 265 (427)
Q Consensus 248 Lh~A~~~~~~~~v~~Ll~ 265 (427)
+..||..|+.+.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 667888899888887743
Done!