Your job contains 1 sequence.
>014276
MLIYRGLSRISRISKKTSFGRRWLPSHPLLSGASHSAAAAAADSSVKVLGCREAYSWSLP
ALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEY
FFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVA
SLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATV
VEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFD
YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGF
EDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTH
RVITRNK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014276
(427 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 1323 4.7e-135 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 590 2.2e-57 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 584 9.6e-57 1
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 311 1.8e-56 3
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 496 2.3e-56 2
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 574 1.1e-55 1
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 299 1.9e-55 3
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 571 2.3e-55 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 568 4.8e-55 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 561 2.6e-54 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 556 8.9e-54 1
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 520 5.8e-50 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 518 9.5e-50 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 518 9.5e-50 1
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 510 6.7e-49 1
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 507 1.4e-48 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 474 4.4e-45 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 337 9.0e-34 2
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 311 1.1e-33 2
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 302 6.2e-33 2
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 319 1.3e-32 2
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 319 1.3e-32 2
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 324 1.1e-31 2
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 315 4.8e-31 2
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 314 9.7e-31 2
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 314 9.7e-31 2
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 280 9.9e-31 2
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 308 1.6e-30 2
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 294 8.6e-30 2
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 293 8.6e-30 2
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 273 8.6e-30 2
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 279 9.6e-29 2
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 279 9.6e-29 2
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 271 3.6e-27 2
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 297 2.5e-26 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 291 1.1e-25 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 291 1.1e-25 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 278 2.6e-24 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 275 5.3e-24 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 273 8.7e-24 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 261 1.6e-22 1
ZFIN|ZDB-GENE-040718-43 - symbol:pdss2 "prenyl (decapreny... 264 7.6e-22 1
UNIPROTKB|F1NMS4 - symbol:PDSS2 "Uncharacterized protein"... 256 6.7e-21 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 240 4.8e-20 1
UNIPROTKB|Q86YH6 - symbol:PDSS2 "Decaprenyl-diphosphate s... 247 4.7e-19 1
UNIPROTKB|A6QR05 - symbol:PDSS2 "PDSS2 protein" species:9... 242 1.9e-18 1
UNIPROTKB|J9NVK1 - symbol:PDSS2 "Uncharacterized protein"... 235 1.5e-17 1
RGD|1359372 - symbol:Pdss2 "prenyl (decaprenyl) diphospha... 234 2.0e-17 1
UNIPROTKB|Q5U2R1 - symbol:Pdss2 "Decaprenyl-diphosphate s... 234 2.0e-17 1
MGI|MGI:1918615 - symbol:Pdss2 "prenyl (solanesyl) diphos... 228 1.0e-16 1
UNIPROTKB|I3LGK0 - symbol:PDSS2 "Uncharacterized protein"... 209 1.6e-16 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 213 4.6e-16 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 213 4.6e-16 1
UNIPROTKB|I3LJ49 - symbol:I3LJ49 "Uncharacterized protein... 203 7.4e-16 1
FB|FBgn0037044 - symbol:CG10585 species:7227 "Drosophila ... 138 1.4e-15 2
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 208 2.7e-15 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 208 2.7e-15 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 199 1.0e-13 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 176 3.4e-13 2
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 188 3.9e-12 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 187 5.2e-12 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 182 8.4e-12 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 184 1.0e-11 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 183 1.4e-11 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 180 1.4e-11 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 181 2.3e-11 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 178 5.1e-11 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 174 7.2e-11 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 174 7.2e-11 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 176 7.8e-11 1
UNIPROTKB|B4DKU5 - symbol:PDSS2 "Decaprenyl-diphosphate s... 170 2.2e-10 1
ASPGD|ASPL0000062493 - symbol:AN0654 species:162425 "Emer... 169 7.0e-10 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 167 8.6e-10 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 158 4.4e-09 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 158 4.4e-09 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 159 8.5e-09 1
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 155 1.1e-08 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 155 1.1e-08 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 154 1.6e-08 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 152 2.3e-08 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 152 2.7e-08 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 149 6.0e-08 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 150 8.6e-08 1
UNIPROTKB|G4NEM8 - symbol:MGG_00758 "Geranylgeranyl pyrop... 150 1.1e-07 1
UNIPROTKB|Q9P885 - symbol:carG "Geranylgeranyl pyrophosph... 144 2.5e-07 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 143 3.0e-07 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 143 3.0e-07 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 142 5.4e-07 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 140 9.7e-07 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 137 1.1e-06 1
UNIPROTKB|P24322 - symbol:al-3 "Geranylgeranyl pyrophosph... 141 1.2e-06 1
UNIPROTKB|G4N8D6 - symbol:MGG_03432 "Geranylgeranyl pyrop... 134 1.5e-05 1
DICTYBASE|DDB_G0293588 - symbol:ggps1 "geranylgeranyl dip... 128 1.6e-05 1
ZFIN|ZDB-GENE-030131-8742 - symbol:ggps1 "geranylgeranyl ... 128 2.2e-05 1
UNIPROTKB|F1NHT9 - symbol:GGPS1 "Uncharacterized protein"... 126 2.5e-05 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 124 3.0e-05 1
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 124 3.0e-05 1
UNIPROTKB|P56966 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 125 3.5e-05 1
UNIPROTKB|E2R3P8 - symbol:GGPS1 "Uncharacterized protein"... 124 4.5e-05 1
UNIPROTKB|F1RGX0 - symbol:GGPS1 "Uncharacterized protein"... 124 4.5e-05 1
WARNING: Descriptions of 10 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 267/377 (70%), Positives = 307/377 (81%)
Query: 51 CREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAE 110
CR YS P G HQ++HQSSS++E E+LDPFSLVADELS+L+ +LR MV+AE
Sbjct: 52 CRTTYSLKSPVFGGFSHQLYHQSSSLVE-----EELDPFSLVADELSLLSNKLREMVLAE 106
Query: 111 VPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCI 170
VPKLASAAEYFFK GV+GK+FR T+LLLMATALNVRVPE L D + +ELR RQ+ I
Sbjct: 107 VPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGI 166
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKN 230
AEITEMIHVASLLHDDVLDDADTRRG+GSLN VMGNK ++VLAGDFLLSRAC ALA+LKN
Sbjct: 167 AEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNK-MSVLAGDFLLSRACGALAALKN 225
Query: 231 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 290
GETM++T+S++QR SMDYYMQKTYYKTASLISNSCKA+A+L GQ
Sbjct: 226 TEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQ 285
Query: 291 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFP 350
TAEVA+LAF+YG+NLGLA+QLIDD+LDFTGTSASLGKGSLSDIRHG+ITAPILFAMEEFP
Sbjct: 286 TAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFP 345
Query: 351 QLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTK 410
QLR VV+Q +D NVDIALEYLGKS+GIQ+ REL I SLPE ++EDV +
Sbjct: 346 QLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKR 405
Query: 411 SRRALLDLTHRVITRNK 427
SRRAL+DLTHRVITRNK
Sbjct: 406 SRRALIDLTHRVITRNK 422
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 131/341 (38%), Positives = 202/341 (59%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVR 146
DPFSLV +L + ++ ++ +L + +Y+F G +GK FRP +++LMA A NV
Sbjct: 90 DPFSLVQKDLQNIYDDIKQQLLVSKAELKALCDYYFD-G-KGKAFRPMIVILMARACNV- 146
Query: 147 VPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGN 206
H E L Q+ IA I+EMIH ASL+HDDV+DD+D RRG ++N V G
Sbjct: 147 -----HSNKEGVLLPA----QRSIAMISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGE 197
Query: 207 KVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYM 266
+ A+LAGDF+LS A +ALA + N GE MQ+ + ++ +Y+
Sbjct: 198 RK-AILAGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQLGSKENENERFKHYL 256
Query: 267 QKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLG 326
+KT+ KTASLI+NSCKA+++L EV +A+ YG+N+G+A+QL+DD+LDFT + LG
Sbjct: 257 EKTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLG 316
Query: 327 KGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELX 386
K S +D++ G+ T P+LFA ++FP+L +++ + F +VD A +Y+ KS G+++T L
Sbjct: 317 KPSAADLKLGLATGPVLFACQQFPELHSMIMRRFSSDGDVDRAWQYVLKSDGVEQTNYLA 376
Query: 387 XXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
I L +++ D AL+ LT V+ R+K
Sbjct: 377 QHYCQEAIRQISRLRPSSERD------ALIRLTELVLRRDK 411
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 136/375 (36%), Positives = 215/375 (57%)
Query: 57 WSLPALHGIRHQIHHQSSSVI---EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVP 112
W P L I + HH S++++ T S E+ DPF L +L L + ++ ++
Sbjct: 11 WPFPKLCSIPWRFHHTSTALMCSCSKTVSDEKYQDPFQLGRKDLKNLYEDIKKELLVSTA 70
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
+L EY+F G +GK FRP +++LMA A N+ H + E++ Q+ +A
Sbjct: 71 ELREMCEYYFD-G-KGKAFRPMIVVLMARACNIH-----HSN-----SREVQASQRSVAI 118
Query: 173 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXX 232
I EMIH ASL+HDDV+DDA++RRG ++N + G + AVLAGDF+LS A +ALA + N
Sbjct: 119 IAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERK-AVLAGDFILSAASLALARIGNTT 177
Query: 233 XXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTA 292
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L
Sbjct: 178 IISVLTQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDP 237
Query: 293 EVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQL 352
+V +A+ YGKN+G+A+QLIDDVLDFT + LGK + +D++ G+ T P+LFA +FP++
Sbjct: 238 KVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVLFACRQFPEM 297
Query: 353 RTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSR 412
++ + F +V+ A +Y+ +S G+Q+T L I L + + R
Sbjct: 298 NAMIMRRFSKPGDVERARKYVLQSDGVQQTTYLAQRYCHEATREISKLRPSPE------R 351
Query: 413 RALLDLTHRVITRNK 427
AL+ LT V+ R+K
Sbjct: 352 EALIQLTEMVLMRDK 366
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 311 (114.5 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 69/176 (39%), Positives = 107/176 (60%)
Query: 255 SSDQ--RCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLI 312
S DQ + +YY+ KTY KTA+LIS SC+ A+L+G + V +D+G+NLG+ +QL+
Sbjct: 304 SHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFGRNLGICFQLV 363
Query: 313 DDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEY 372
DD+LDFT + LGK S +D++ GI TAP+LFA +E P L ++ + F + +V+ ++
Sbjct: 364 DDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSERGDVEKTIDS 423
Query: 373 LGKSRGIQKTRELXXXXXXXXXXXI-DSLPENNDEDVTKSRRALLDLTHRVITRNK 427
+ GI KT+ L + DSLPE++ +R AL LT+ ++TR K
Sbjct: 424 VRLHNGIAKTKILAEEYRDKALQNLRDSLPESD------ARSALEFLTNSILTRRK 473
Score = 204 (76.9 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 51/109 (46%), Positives = 63/109 (57%)
Query: 148 PEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 207
PEPL + D L +Q+ +AEI EMIH ASLLHDDV+D +DTRRG S N NK
Sbjct: 157 PEPLPEETFDKQRGIL-PKQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNK 215
Query: 208 VLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSS 256
+AVLAGDFLL RA V+++ L N GE MQ+ +S
Sbjct: 216 -MAVLAGDFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNTS 263
Score = 101 (40.6 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVR 146
+P SLV+ E++ LAK + +++ + P L Y+F+ EGK+ RP ++LL++ AL+
Sbjct: 44 NPISLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFE--TEGKKVRPLLVLLLSRALS-E 100
Query: 147 VP 148
+P
Sbjct: 101 IP 102
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 496 (179.7 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 111/268 (41%), Positives = 163/268 (60%)
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALA 226
Q+ +AEITE+IH ASLLHDDV+D+A TRR S N GNK +AVLAGDFLL RA VALA
Sbjct: 196 QRRLAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNK-MAVLAGDFLLGRASVALA 254
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQM-TTSSDQRC------SMDYYMQKTYYKTASLISN 279
L++ GE MQ+ T+ D++ ++ YY+QKTY KTASLIS
Sbjct: 255 RLRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLISK 314
Query: 280 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIIT 339
SC+A ALL T +V A+ YG+NLGLA+QL+DD+LD+T + LGK + +D+ G+ T
Sbjct: 315 SCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPAGADLELGLAT 374
Query: 340 APILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDS 399
AP+LFA ++ P+L +V + F +V+ A E + ++ G+++TR L I
Sbjct: 375 APLLFAWKQHPELGPLVGRKFCREGDVEKARELVYRANGVEQTRALAQEYADKAIAAISP 434
Query: 400 LPENNDEDVTKSRRALLDLTHRVITRNK 427
P++ +++ L+++ + + R K
Sbjct: 435 FPDS------EAKAGLIEMCRKTMNRRK 456
Score = 102 (41.0 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNV 145
+DP +V EL L K +R ++ + P L A+Y+ + EGK RP ++LLM+ A +
Sbjct: 78 VDPLRIVGKELKFLTKNIRQLLGSGHPTLDKVAKYYTRS--EGKHMRPLLVLLMSQATAL 135
Query: 146 RVPEPLHDGVEDALAT 161
P + AL++
Sbjct: 136 TTPRSNRSTSDAALSS 151
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 138/371 (37%), Positives = 213/371 (57%)
Query: 60 PALHGIRHQIHHQSSSVIE--DTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLAS 116
P +H I Q H ++ ++ T S E+ DPF L +L L + +R + +L
Sbjct: 59 PTMHSIS-QFHQRTPAMCSCRQTQSGEKYSDPFKLGWRDLKGLYEDIRKELHISTRELKD 117
Query: 117 AAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEM 176
+EY+F G +GK FRP +++LMA A N+ H+ A E++ Q+ IA + EM
Sbjct: 118 MSEYYFD-G-KGKAFRPIIVVLMARACNIH-----HNN-----AREMQASQRSIALVAEM 165
Query: 177 IHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXX 236
IH A+L+HDDV+DDA +RRG ++N + G K AVLAGD +LS A VALA + N
Sbjct: 166 IHTATLVHDDVIDDASSRRGKHTVNKIWGEKK-AVLAGDLILSAASVALARIGNTAVVSM 224
Query: 237 XXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAI 296
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V
Sbjct: 225 LAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHE 284
Query: 297 LAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVV 356
+A+ YGKN+G+A+QLIDDVLDFT S +GK + +D++ GI T P+LFA ++FP++ ++
Sbjct: 285 IAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMI 344
Query: 357 EQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALL 416
+ F +VD A +Y+ +S G+Q+T L I L + + D AL+
Sbjct: 345 MRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTERD------ALI 398
Query: 417 DLTHRVITRNK 427
L+ V+TR+K
Sbjct: 399 QLSESVLTRDK 409
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 299 (110.3 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 61/165 (36%), Positives = 104/165 (63%)
Query: 261 SMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTG 320
+ +YY+ KTY KTASL+S SC+A A+L+G ++ + +G+NLGL +Q++DD+LD+T
Sbjct: 350 AFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTS 409
Query: 321 TSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQ 380
+ ++GK S +D++ G+ TAPILFA ++ P+L ++ + F +V+IA + K G+
Sbjct: 410 SDKTIGKPSQADLKLGLATAPILFAWKQEPKLGDLIARKFNQPGDVEIARRAVEKYDGVA 469
Query: 381 KTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITR 425
+T+E+ + LPE+ ++R AL LT+ V+TR
Sbjct: 470 QTKEMATMYCHQALKNLRVLPES------EARSALELLTNSVLTR 508
Score = 198 (74.8 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 47/102 (46%), Positives = 61/102 (59%)
Query: 162 ELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA 221
++ +Q+ +AEI EMIH ASLLHDDV+D +D+RRG S N NK +AVLAGDFLL RA
Sbjct: 192 DILPKQRRLAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNK-MAVLAGDFLLGRA 250
Query: 222 CVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD 263
VA+A L+N GE MQ+ + Q + D
Sbjct: 251 SVAIARLRNPEVIELLSTTIANLVEGEFMQLKNTVLQNNNND 292
Score = 118 (46.6 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 29/88 (32%), Positives = 52/88 (59%)
Query: 70 HHQSSSVIEDTDSQEQL---------DPFSLVADELSILAKRLRSMVVAEVPKLASAAEY 120
HH SS+ ++ E+L DPFS+V+ E+S LAK + +++ + P L + Y
Sbjct: 23 HHSSSTFKTAVETAEKLVTPPTSKFSDPFSIVSHEMSNLAKSIANLIGSGHPTLNRVSSY 82
Query: 121 FFKMGVEGKRFRPTVLLLMATALNVRVP 148
+F+ EGK RP ++L+++ AL+ ++P
Sbjct: 83 YFE--AEGKNVRPLIVLILSKALS-KIP 107
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 137/363 (37%), Positives = 210/363 (57%)
Query: 68 QIHHQSSSVI--EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKM 124
+ HH +S+V T S E+ DPF L +L+ L + +R ++ +L +EY+F
Sbjct: 22 RFHHTTSAVCCCSKTQSGEKYTDPFKLGWRDLNGLYEDIRKELLISTTELKEMSEYYFD- 80
Query: 125 GVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLH 184
G +GK FRP +++LMA A N+ H D A+ Q+ IA I EMIH ASL+H
Sbjct: 81 G-KGKAFRPIIVVLMARACNIH-----HSNSRDVQAS-----QRSIALIAEMIHTASLVH 129
Query: 185 DDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXX 244
DDV+DDA +RRG ++N + G K AVLAGD +LS A +ALA + N
Sbjct: 130 DDVIDDASSRRGKHTVNKIWGEKK-AVLAGDLILSAASMALARIGNTTVISILTQVIEDL 188
Query: 245 XXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKN 304
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN
Sbjct: 189 VRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKN 248
Query: 305 LGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSS 364
+G+A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ + F
Sbjct: 249 VGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPG 308
Query: 365 NVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVIT 424
+VD A +Y+ +S G+Q+T L I L + + D AL+ L+ V+T
Sbjct: 309 DVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSAERD------ALIQLSEIVLT 362
Query: 425 RNK 427
R+K
Sbjct: 363 RDK 365
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 134/369 (36%), Positives = 212/369 (57%)
Query: 62 LHGIRHQIHHQS--SSVIEDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAA 118
++G+ + HH + + +T S E+ DPF + +L L + +R + +L +
Sbjct: 70 MYGVS-RFHHTTPVACCFSETLSGEKYTDPFKIGWRDLKGLYEDIRKELFISTAELREMS 128
Query: 119 EYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIH 178
EY F G +GK FRP +++LMA A N+ H+ + A+ Q+ IA I EMIH
Sbjct: 129 EYHFD-G-KGKAFRPIIVVLMARACNIH-----HNNARNVQAS-----QRAIALIAEMIH 176
Query: 179 VASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXX 238
ASL+HDD++DDA +RRG ++N + G K AVLAGD +LS A +ALA + N
Sbjct: 177 TASLVHDDIIDDASSRRGKHTVNKIWGEKK-AVLAGDLILSAASIALARIGNTTVISILT 235
Query: 239 XXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILA 298
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A
Sbjct: 236 QVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIA 295
Query: 299 FDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQ 358
+ YGKN+G+A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ +
Sbjct: 296 YQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMR 355
Query: 359 GFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDL 418
F +VD AL+Y+ +S G+Q+T L I L + + D AL+ L
Sbjct: 356 RFGSPGDVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLRPSPERD------ALIQL 409
Query: 419 THRVITRNK 427
+ V+TR+K
Sbjct: 410 SEMVLTRDK 418
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 136/363 (37%), Positives = 209/363 (57%)
Query: 68 QIHHQSSSVI--EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKM 124
+ HH + ++ T S E+ DPF L +L L + +R + +L +EY+F
Sbjct: 67 RFHHMTPALCCCSKTRSGEKYTDPFKLGWRDLKGLYEDIRKELFISTTELKEMSEYYFD- 125
Query: 125 GVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLH 184
G +GK FRP +++LMA A N+ H+ D A++ RT IA I EMIH ASL+H
Sbjct: 126 G-KGKAFRPIIVVLMARACNIH-----HNNSRDMQASQ-RT----IALIAEMIHTASLVH 174
Query: 185 DDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXX 244
DDV+DDA +RRG ++N + G K AVLAGD +LS A +ALA + N
Sbjct: 175 DDVIDDASSRRGKHTVNKIWGEKK-AVLAGDLILSAASIALARIGNTTVISILTQVIEDL 233
Query: 245 XXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKN 304
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN
Sbjct: 234 VRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKN 293
Query: 305 LGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSS 364
+G+A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ + F
Sbjct: 294 VGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPG 353
Query: 365 NVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVIT 424
+VD A +Y+ +S G+Q+T L I L + + R AL+ L+ V+T
Sbjct: 354 DVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSPE------REALIQLSEIVLT 407
Query: 425 RNK 427
R+K
Sbjct: 408 RDK 410
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 133/361 (36%), Positives = 206/361 (57%)
Query: 68 QIHHQSSSVIEDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGV 126
+ HH + T S E+ DPF L +L L + +R ++ +L +EY+F G
Sbjct: 76 RFHHTTPD--SKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLISTSELKEMSEYYFD-G- 131
Query: 127 EGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDD 186
+GK FRP ++ LMA A N+ H+ + ++ Q+ IA I EMIH ASL+HDD
Sbjct: 132 KGKAFRPIIVALMARACNIH-----HNN-----SRHVQASQRAIALIAEMIHTASLVHDD 181
Query: 187 VLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXX 246
V+DDA +RRG ++N + G K AVLAGD +LS A +ALA + N
Sbjct: 182 VIDDASSRRGKHTVNKIWGEKK-AVLAGDLILSAASIALARIGNTTVISILTQVIEDLVR 240
Query: 247 GETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLG 306
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+G
Sbjct: 241 GEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVG 300
Query: 307 LAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNV 366
+A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ + F +V
Sbjct: 301 IAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDV 360
Query: 367 DIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
D A +Y+ +S G+Q+T L I L + + D AL+ L+ V+TR+
Sbjct: 361 DRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERD------ALIQLSEIVLTRD 414
Query: 427 K 427
K
Sbjct: 415 K 415
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 109/270 (40%), Positives = 168/270 (62%)
Query: 158 ALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFL 217
AL++ + Q +AEI EMIH ASL+HDDV+D+A TRR + S+N NK LA+L GD+L
Sbjct: 196 ALSSTVHGSQLKLAEIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNK-LAILCGDYL 254
Query: 218 LSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLI 277
L+RA V L++++N GE MQ S+ S D Y+QKTY KT SLI
Sbjct: 255 LARASVVLSTIRNPDVTECMSTALAELVEGEFMQ--AKSNGVVSFDNYLQKTYLKTGSLI 312
Query: 278 SNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGI 337
+NSC++ A+L+G + + ++ ++GKNLGLA+Q++DD+LD+TG++ GK + D+ G+
Sbjct: 313 TNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGL 372
Query: 338 ITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXI 397
TAP+L+A +EFPQL ++++ F + +V+ A + S+GI+KTR L +
Sbjct: 373 ATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSL 432
Query: 398 DSLPENNDEDVTKSRRALLDLTHRVITRNK 427
LP++ D+ L+ L+H V+TR K
Sbjct: 433 LKLPQSESRDL------LITLSHIVVTRTK 456
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 41/97 (42%), Positives = 62/97 (63%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P L+S + Y+F++ +GKR RPT++LL++ AL+ V H ++L+ +A
Sbjct: 168 PILSSISSYYFEL--KGKRIRPTIVLLLSKALSSTV----H-------GSQLK-----LA 209
Query: 172 EITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
EI EMIH ASL+HDDV+D+A TRR + S+N NK+
Sbjct: 210 EIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNKL 246
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 128/338 (37%), Positives = 192/338 (56%)
Query: 72 QSSSVIEDTDSQEQLDP------FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMG 125
QS +V D QE P F LVA +L L L S+V AE P L SAAE F G
Sbjct: 66 QSQTVSFDL-KQESKQPISLVTLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIF--G 122
Query: 126 VEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHD 185
GKR RP ++ L++ H E A EL T + +AEI EMIH ASL+HD
Sbjct: 123 AGGKRMRPGLVFLVS-----------HATAELAGLKELTTEHRRLAEIIEMIHTASLIHD 171
Query: 186 DVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXX 245
DVLD++D RRG +++ + G +V AVLAGDF+ ++A LA+L+N
Sbjct: 172 DVLDESDMRRGKETVHELFGTRV-AVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFA 230
Query: 246 XGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNL 305
GE Q ++ D +D Y+ K++YKTASL++ S K A+ + +V +++GKNL
Sbjct: 231 SGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNL 290
Query: 306 GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSN 365
GL++Q++DD+LDFT ++ LGK + SD+ G +TAP++FA+E P+LR ++E F ++ +
Sbjct: 291 GLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLREIIESEFCEAGS 350
Query: 366 VDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPEN 403
++ A+E + K GI++ +EL + LP +
Sbjct: 351 LEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRS 388
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 122/315 (38%), Positives = 183/315 (58%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F +VAD+L L L S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 99 FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAG--GKRMRPGLVFLVSRAT----- 151
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
E A EL + + EI EMIH ASL+HDDVLD++D RRG +++ + G +V
Sbjct: 152 ------AELAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRV 205
Query: 209 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQK 268
AVLAGDF+ ++A LA+L+N GE Q ++ D +D YM K
Sbjct: 206 -AVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLK 264
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
+YYKTASL++ S K A+ + ++VA + +GKNLGL++Q++DD+LDFT ++ LGK
Sbjct: 265 SYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKP 324
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXX 388
+ +D+ G ITAP++FA+E P+LR ++E F + +++ A+E + GI+K +EL
Sbjct: 325 AANDLAKGNITAPVIFALENEPRLREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELAKE 384
Query: 389 XXXXXXXXIDSLPEN 403
++ LP +
Sbjct: 385 KAELALKNLNCLPRS 399
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 119/339 (35%), Positives = 198/339 (58%)
Query: 51 CREAYSWSLPALHGIR-HQ-IHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVV 108
C ++ +S + +R H +H Q + + Q+DP+ ++ D+L +R ++
Sbjct: 77 CSQSLQYSQSSKANLRQHSSVHTQQPA---GPVREFQIDPYIILDDDLKYFYDDVRYLLK 133
Query: 109 AEV--PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTR 166
+ P+L + A Y+F G +GK RP V +LMA A+N + H +L +
Sbjct: 134 SGTSQPELDTIASYYFD-G-QGKALRPMVTMLMAKAINYHLNNESH---------QLVHK 182
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALA 226
Q+ IA +EM+H ASL+HDDV+D +D RRG S+N + +K + +AGD++LS A + +A
Sbjct: 183 QRQIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKKVT-MAGDYILSIASIMIA 241
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 286
L++ GE MQ+ + + +Y+ KTY KTASLI+N+ KA A+
Sbjct: 242 RLRSDDVTIVLSQILTDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALKATAV 301
Query: 287 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM 346
+A VA +AF YG+N+GLA+QL+DD+LDF ++ +GK + +D++ G+ TAP+LFA
Sbjct: 302 IAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFAC 361
Query: 347 EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTREL 385
E++P+L +V + F + +V+ A E + KS G+++TR L
Sbjct: 362 EKYPELNPMVMRRFSEPGDVERAFELVHKSHGLEQTRFL 400
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 125/347 (36%), Positives = 189/347 (54%)
Query: 73 SSSVIEDTDSQEQLDPF-SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
S++ +++ Q Q D L+ + S + L + V L Y+F+ G GK
Sbjct: 35 STAFVQEHVRQMQNDIMVQLIPQDESGAVENLADLNVTS--NLGRMTHYYFQQG--GKML 90
Query: 132 RPTVLLLMATALNVRVPEPLHDGVEDALATE---------LRTRQQCIAEITEMIHVASL 182
RPTV LLM A N + + L+TE + Q I I EMIH ASL
Sbjct: 91 RPTVSLLMGNACNSAANRSISEEYLAMLSTERSGIAAHLSVCQNQYKIGMIAEMIHTASL 150
Query: 183 LHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXX 242
+HDDV+D+A+TRRG S+N V GNK ++VL GDF+L+RA L S+
Sbjct: 151 VHDDVIDEANTRRGSASVNAVWGNK-MSVLVGDFILARATQILCSIGKPNIISVMASIIE 209
Query: 243 XXXXGETMQMTTSSDQRCSMDY---YMQKTYYKTASLISNSCKAIALLA-GQTAEVAILA 298
GE MQM+T+ +D Y++KT+ KTASL ++SC++ A+LA G ++ +A
Sbjct: 210 DLVLGEFMQMSTTPTDATPVDRMKAYIEKTHRKTASLFASSCRSAAILADGSDLKLHEIA 269
Query: 299 FDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQ 358
F+YG+NLG+A+QL DD+LDF T+ +GK +D++ G+ TAP+L+A E++P+L T++ +
Sbjct: 270 FEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLKLGLATAPVLYACEQYPELNTMLLR 329
Query: 359 GFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENND 405
F+ + + A E + S G+ KTR L SLP N+
Sbjct: 330 KFKHDGDAEKAREIVVNSDGMDKTRRLIDSYSQKAVEMASSLPNRNE 376
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 120/352 (34%), Positives = 199/352 (56%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLM--ATAL----- 143
L+ +EL ++ +R M+ + L ++Y+ +GK+ RP+++LLM AT+L
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEECSKYYTI--AQGKQMRPSLVLLMSKATSLCHGID 93
Query: 144 -NVRVPEPLHDGVEDALAT-ELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLN 201
+V + + D + +T ++ Q +A+ITEMIH+ASLLHDDV+D A+ RRG S N
Sbjct: 94 RSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSN 153
Query: 202 FVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSD---- 257
GN+ ++LAG+F+L+RA A+A L+N GE +Q+ + D
Sbjct: 154 VAFGNR-RSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSL 212
Query: 258 --QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDV 315
++ + DYY++K++ KTASLIS SCKA +L + VA A +YG+ +G A+QL+DDV
Sbjct: 213 EIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDV 272
Query: 316 LDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGK 375
LD+T +LGK + +D++ G+ TAP+LFA +++P+L ++ F S++ A +
Sbjct: 273 LDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNRFNHPSDIQRARSLVEC 332
Query: 376 SRGIQKTRELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
+ I++T + LP++ +R+AL L +VITR K
Sbjct: 333 TDAIEQTITWAKEYIKKAKDSLLCLPDS------PARKALFALADKVITRKK 378
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 337 (123.7 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 87/263 (33%), Positives = 128/263 (48%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
IA + E IH A+LLHDDV+D++D RRG + N GN +VL GDF+ +RA + SL
Sbjct: 69 IAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAA-SVLVGDFIYTRAFQMMTSLG 127
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
+ GE +Q+ +D + + YM+ Y KTA L + + +LAG
Sbjct: 128 SLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAG 187
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM--- 346
T E DYG+ LG A+QLIDD+LD+ LGK D+ G T P+L AM
Sbjct: 188 CTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHG 247
Query: 347 --EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENN 404
E+ +RT +EQG ++ LE + ++ TR+ + LP+
Sbjct: 248 TPEQAQMIRTAIEQG-NGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPD-- 304
Query: 405 DEDVTKSRRALLDLTHRVITRNK 427
T R AL+ L H + R++
Sbjct: 305 ----TPWREALIGLAHIAVQRDR 323
Score = 46 (21.3 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAL 143
L A +++ + + + ++V +L + Y+ G GKR RP + +L A A+
Sbjct: 9 LTAQDMAGVNAAILEQLNSDV-QLINQLGYYIVSG-GGKRIRPMIAVLAARAV 59
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 311 (114.5 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 78/263 (29%), Positives = 130/263 (49%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A + E IH A+LLHDDV+D+A RRG S N V GN+ +VL GDFL S++ +
Sbjct: 67 LASVIEFIHTATLLHDDVVDNATLRRGNASANEVWGNEA-SVLVGDFLFSKSFSLMVEAG 125
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
+ GE +Q+ +SD + + Y++ KTA L+S +C+A A+L
Sbjct: 126 DLRILKVISGATTIIAEGEVLQLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAGAILGT 185
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM--- 346
+AE D+G +LG+A+QL+DD LD+T + GK D+ G IT P++ +
Sbjct: 186 SSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLMKC 245
Query: 347 --EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENN 404
EE + VVE+ + + + + K GI+ T + + + ++
Sbjct: 246 SDEERETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCKAHLGAFVDSQ 305
Query: 405 DEDVTKSRRALLDLTHRVITRNK 427
+ + AL++L V+ R +
Sbjct: 306 E------KAALIELADYVVNRKR 322
Score = 71 (30.1 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
SLV D+L + + R + ++V + EY G GKR RP +LLL A
Sbjct: 6 SLVGDDLKNVELQFRKDLESDVYLIRKVGEYVLASG--GKRIRPMLLLLSA 54
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 302 (111.4 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 73/239 (30%), Positives = 121/239 (50%)
Query: 166 RQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVAL 225
R + +A E+IH+ASL+HDDV+DDAD RRG ++ N+ A+ GD+L +R+ +
Sbjct: 65 RMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNR-FAMYTGDYLFARSLERM 123
Query: 226 ASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 285
A L N GE Q+ + Y+++ KTA LI+ SC+ A
Sbjct: 124 AELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALLIAASCQLGA 183
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L AG + + +G +G+++Q+ DD+LDFTGT LGK + SD+ G +T P+L+A
Sbjct: 184 LAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYA 243
Query: 346 MEEFPQLRTVVEQGFE-DSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPEN 403
+ + + G E D + + + + ++ I+++ L +D LP N
Sbjct: 244 LSDERVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSDRYLDKALHLLDGLPMN 302
Score = 73 (30.8 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
+S ++D+L+ + + L V +E L AA + + G GKR RP +LL A
Sbjct: 7 YSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAG--GKRIRPVFVLLAA 56
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 319 (117.4 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 81/261 (31%), Positives = 127/261 (48%)
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKN 230
A E IH A+LLHDDV+D++D RRG + N GN +VL GDF+ +R+ + L +
Sbjct: 95 AAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAA-SVLVGDFIYTRSFQMMTELGS 153
Query: 231 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 290
GE Q+ +D + YMQ Y KTA L + + A+L
Sbjct: 154 MKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDA 213
Query: 291 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEF- 349
+ EV + +YGK LG A+QLIDDV+D+T +GK D+ G T P+L+AM+
Sbjct: 214 SPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGN 273
Query: 350 PQLRTVVEQGFEDSSNVDIALEYLG---KSRGIQKTRELXXXXXXXXXXXIDSLPENNDE 406
P+ ++ + E ++ + E L ++ +Q T E + LPE+
Sbjct: 274 PEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAILPES--- 330
Query: 407 DVTKSRRALLDLTHRVITRNK 427
+ ++AL+ L H + R+K
Sbjct: 331 ---EYKQALITLAHMAVNRSK 348
Score = 53 (23.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAL 143
+L A++++ + + + + + ++V + Y G GKR RP + +L A AL
Sbjct: 33 ALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGG--GKRLRPLLAVLSAKAL 84
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 319 (117.4 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 81/261 (31%), Positives = 127/261 (48%)
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKN 230
A E IH A+LLHDDV+D++D RRG + N GN +VL GDF+ +R+ + L +
Sbjct: 95 AAFIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAA-SVLVGDFIYTRSFQMMTELGS 153
Query: 231 XXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 290
GE Q+ +D + YMQ Y KTA L + + A+L
Sbjct: 154 MKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAATQIGAILCDA 213
Query: 291 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEF- 349
+ EV + +YGK LG A+QLIDDV+D+T +GK D+ G T P+L+AM+
Sbjct: 214 SPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGN 273
Query: 350 PQLRTVVEQGFEDSSNVDIALEYLG---KSRGIQKTRELXXXXXXXXXXXIDSLPENNDE 406
P+ ++ + E ++ + E L ++ +Q T E + LPE+
Sbjct: 274 PEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAILPES--- 330
Query: 407 DVTKSRRALLDLTHRVITRNK 427
+ ++AL+ L H + R+K
Sbjct: 331 ---EYKQALITLAHMAVNRSK 348
Score = 53 (23.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATAL 143
+L A++++ + + + + + ++V + Y G GKR RP + +L A AL
Sbjct: 33 ALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGG--GKRLRPLLAVLSAKAL 84
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 324 (119.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 78/224 (34%), Positives = 120/224 (53%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
IA I E IH A+LLHDDV+D+++ RRG + N + GN +VL GDFL +R+ + L
Sbjct: 73 IAAIIEFIHTATLLHDDVVDESNMRRGRETANALFGNSA-SVLVGDFLYTRSFQMMTKLG 131
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
+ GE +Q+ +D + + YMQ Y KTA L + + A++A
Sbjct: 132 DMRIMDILSEATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAK 191
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAME-- 347
Q A++ DYGK LG A+QL+DD++D+T + +GK D+ G T P+L+AM+
Sbjct: 192 QDAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHG 251
Query: 348 -EFPQ--LRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTREL 385
E Q ++ +E G N+++ A+E G R QK E+
Sbjct: 252 NEAQQKLIKEAIELG-NGMDNLELILQAMEETGSLRYTQKQAEI 294
Score = 39 (18.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATA 142
+L +++ + + + ++V + Y G GKR RP + +L A A
Sbjct: 12 ALAQSDMAAVNDLIYDQLQSDVALINQLGIYIVNGG--GKRMRPMLTVLAARA 62
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 315 (115.9 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 86/262 (32%), Positives = 127/262 (48%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A I E IH ASLLHDDV+D++ RRG + N + GN +VL GDFL +R+ + L
Sbjct: 77 LAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSA-SVLVGDFLYTRSFQMMTELD 135
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
+ GE +Q+ +D + + YM+ Y KTA L + A+LAG
Sbjct: 136 SMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAG 195
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM--- 346
+ E DYGK LG A+QL DD+LD+T S LGK D+ G T P+++A+
Sbjct: 196 ASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHG 255
Query: 347 -EEFPQL-RTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENN 404
EE QL R +EQG + + ++ + L + T++ + LP
Sbjct: 256 TEEEKQLIRQAIEQG-DGTHAIEKIVAALHHCGALNYTQQKAIEESNKAIAALSVLP--- 311
Query: 405 DEDVTKSRRALLDLTHRVITRN 426
D D + AL+ L + RN
Sbjct: 312 DSDF---KTALISLAKISVDRN 330
Score = 42 (19.8 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 81 DSQEQLDPFSLVAD-ELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLM 139
+S L+ +AD ++ + + + + ++V + Y G GKR RP + +L
Sbjct: 6 ESIMDLNAIRQLADTDMQAVNQLIYKQLESDVALINQLGFYIINGG--GKRLRPLLSVLA 63
Query: 140 ATALN 144
A A++
Sbjct: 64 ARAVD 68
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 314 (115.6 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 83/273 (30%), Positives = 145/273 (53%)
Query: 168 QC-IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALA 226
QC I +E+IH+ SLLHDDV+DD++ RRG+ +L+ GNK+ ++L+GD+LL+RA A
Sbjct: 266 QCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKI-SILSGDYLLARASSIFA 324
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTS-SDQRCSMDYYMQKTYYKTASLISNSCKAIA 285
+ GE +Q ++ ++ Y+ K+Y+KTASL S+ IA
Sbjct: 325 GTGSPKICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIA 384
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
+L+ + + L F+ G ++G+A+QL DD LD+ + K L+D+++ I TAP+LF+
Sbjct: 385 ILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYK-IDDNTNKPILNDLKNNIKTAPLLFS 443
Query: 346 MEEFPQ-LRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSL---- 400
PQ + ++ + +++++ L Y+ S ++K + SL
Sbjct: 444 YNYNPQVILQLINKNSYTNNDIENILYYIQHSNSMKKNELCSLLHIKKASDILYSLISHC 503
Query: 401 --PENND-----EDVTKSRRALLDLTHRVITRN 426
P N +D+ +S AL++L V++RN
Sbjct: 504 NKPSTNKNNTKHDDIKQSSEALINLILNVLSRN 536
Score = 50 (22.7 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 18/98 (18%), Positives = 44/98 (44%)
Query: 47 KVLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSM 106
+VL C + + ++ H +H + E T+ +DP++L ++ + + + ++
Sbjct: 119 EVLLCMDVLQYEEDKVNRELHLLHSYFNK--ERTN----IDPYTLCESKIKNIDEYIYNI 172
Query: 107 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
+ + Y + +GKRFR + +L+ L+
Sbjct: 173 IKTNYKNIDEFITYIYLY--KGKRFRVILSILLKNILH 208
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 314 (115.6 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 83/273 (30%), Positives = 145/273 (53%)
Query: 168 QC-IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALA 226
QC I +E+IH+ SLLHDDV+DD++ RRG+ +L+ GNK+ ++L+GD+LL+RA A
Sbjct: 266 QCKIIAASEIIHMGSLLHDDVIDDSNKRRGVIALHKKFGNKI-SILSGDYLLARASSIFA 324
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTS-SDQRCSMDYYMQKTYYKTASLISNSCKAIA 285
+ GE +Q ++ ++ Y+ K+Y+KTASL S+ IA
Sbjct: 325 GTGSPKICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACIA 384
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
+L+ + + L F+ G ++G+A+QL DD LD+ + K L+D+++ I TAP+LF+
Sbjct: 385 ILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYK-IDDNTNKPILNDLKNNIKTAPLLFS 443
Query: 346 MEEFPQ-LRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSL---- 400
PQ + ++ + +++++ L Y+ S ++K + SL
Sbjct: 444 YNYNPQVILQLINKNSYTNNDIENILYYIQHSNSMKKNELCSLLHIKKASDILYSLISHC 503
Query: 401 --PENND-----EDVTKSRRALLDLTHRVITRN 426
P N +D+ +S AL++L V++RN
Sbjct: 504 NKPSTNKNNTKHDDIKQSSEALINLILNVLSRN 536
Score = 50 (22.7 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 18/98 (18%), Positives = 44/98 (44%)
Query: 47 KVLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSM 106
+VL C + + ++ H +H + E T+ +DP++L ++ + + + ++
Sbjct: 119 EVLLCMDVLQYEEDKVNRELHLLHSYFNK--ERTN----IDPYTLCESKIKNIDEYIYNI 172
Query: 107 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
+ + Y + +GKRFR + +L+ L+
Sbjct: 173 IKTNYKNIDEFITYIYLY--KGKRFRVILSILLKNILH 208
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 280 (103.6 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 70/215 (32%), Positives = 115/215 (53%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A E+IH+ASL+HDDV+D A RRG ++N G+++ A+ GD+L +++ + +++
Sbjct: 69 VAVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDRI-AMYTGDYLFAKSLECITNIE 127
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
GE Q+ + ++ Y+++ KTA LI+ SC+ A+ AG
Sbjct: 128 IPEAHQALSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKRKTALLIAASCQLGAIAAG 187
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE- 348
+ F YG +G++YQ+IDD+LDF T LGK + D+ G IT P L+AME+
Sbjct: 188 ANRDTVSRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAMEDP 247
Query: 349 --FPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQK 381
++R+V E D +I +E + S I K
Sbjct: 248 ILCKKIRSVHENTTADEMK-EI-IEAVKNSAAIDK 280
Score = 74 (31.1 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLL 138
+S + +++++ K L+ V +E P + AA + G GKR RP +LL
Sbjct: 7 YSFLRSDINVIEKELKKTVASEQPLVEEAALQLIEAG--GKRIRPVFVLL 54
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 308 (113.5 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 79/258 (30%), Positives = 128/258 (49%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A +EM+H+A+L+HDD +D ADTRR ++N V G + A+L GDFL + A A
Sbjct: 72 LATSSEMLHIATLVHDDAIDKADTRRSRRTVNSVWGLEK-AILLGDFLFAHAAEVAAETD 130
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
N GE Q S + S + Y+++ KTA+L + K A+LA
Sbjct: 131 NMRIVTLFAQTLQIIASGELKQAYASFNPDQSYENYLERISGKTAALFVMATKGGAILAD 190
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEF 349
+ + YG NLGL++Q++DD+LDF G + +GK SD+ +G +T P L M+ +
Sbjct: 191 ASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNGTVTLPALLLMDRY 250
Query: 350 PQLRTVVEQ-GFED-SSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDED 407
P+ + + G D S++V A+E + S I + + + LP+
Sbjct: 251 PENNPIKDMLGATDRSAHVARAVEMINSSDIIDLSYKEAKRYADLACQDLSKLPK----- 305
Query: 408 VTKSRRALLDLTHRVITR 425
T +R +L L ++ R
Sbjct: 306 -TAARESLYQLAEFIVER 322
Score = 44 (20.5 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 137 LLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMI 177
+L +++ + E L GVED +R+Q E+ EM+
Sbjct: 1 MLKLSSIYAPINEGLK-GVEDEFKLVSESRKQSFPEMAEML 40
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 294 (108.6 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 69/235 (29%), Positives = 117/235 (49%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
IA E+IH A+LLHDDV+D+++ RRG + N + GNK ++L GDFLL+ + L K
Sbjct: 75 IAAAIELIHNATLLHDDVIDESELRRGEKTSNVIWGNKA-SILVGDFLLAISFQWLIKCK 133
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
N GE QM +S + S + Y++ KTA+L S +C++ A LA
Sbjct: 134 NLNILSILSQASKDVIVGEVQQMISSHNINISKEKYIEIISAKTAALFSATCESAANLAQ 193
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEF 349
+ E ++G N G+++Q++DD+LD+T + GK +D+ G T P++ A +
Sbjct: 194 TSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQNA 253
Query: 350 PQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENN 404
+ N++ A+ Y+ I+K+ + ++ E+N
Sbjct: 254 TSKEKKFWDQISVNPNLEQAISYIKVHNAIEKSISIATTYINQAKSCLNIFAESN 308
Score = 51 (23.0 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 90 SLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
SLV +L + + + + ++ K G GKR RP + ++ LN
Sbjct: 14 SLVQQDLDSMESLILHQNNKHITLITEIVQHLIKSG--GKRIRPIIFFIICKMLN 66
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 293 (108.2 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 72/242 (29%), Positives = 118/242 (48%)
Query: 166 RQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVAL 225
R+ +A E +H A+LLHDDV+D +D RRG+ + N + GNK ++L GDFL + A +
Sbjct: 60 RRIVVAAAIEFLHSATLLHDDVVDKSDMRRGVETANSIWGNKA-SILVGDFLFATAFQWI 118
Query: 226 ASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 285
S + GE Q+ SS S Y++ KTA L S +C++ A
Sbjct: 119 VSCNSIQLLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESAA 178
Query: 286 LL--AGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPIL 343
+L G A+ D+G N G+ +Q++DD+LD+T LGK + +DI G +T P++
Sbjct: 179 VLHDVGTLQRNALR--DWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLI 236
Query: 344 FAMEEFPQLRTVVEQGF--EDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLP 401
A E + + +G + + D+A Y+ I+K+ L + P
Sbjct: 237 IAYEGASEKDRIGLRGALSRERPDPDLAFSYIMAQNAIEKSVGLAKEYIAIAEKQLSHFP 296
Query: 402 EN 403
++
Sbjct: 297 DS 298
Score = 52 (23.4 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLL 137
LVA EL + + +EV +A ++ G GKR RP +LL
Sbjct: 4 LVASELQEMESLIVKQRHSEVQLIADIIQHLILSG--GKRTRPVMLL 48
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 273 (101.2 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 64/234 (27%), Positives = 122/234 (52%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A EMIH+ASL+HDDV+DDA+ RRG ++ N++ A+ GD++L+ + + +
Sbjct: 97 VAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRI-AMYTGDYMLAGSLEMMTRIN 155
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
GE Q+ + ++ Y+++ KTA LI+ SC+ A+ +G
Sbjct: 156 EPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQLGAIASG 215
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEF 349
++ + +G +G++YQ+IDD+LDFT T LGK D+ G +T P+L+A++
Sbjct: 216 ADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKN- 274
Query: 350 PQLRTVVEQGFEDSSNVDIA--LEYLGKSRGIQKTRELXXXXXXXXXXXIDSLP 401
P L+ ++ +++ + +E + K+ I+ + + +++LP
Sbjct: 275 PALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTLP 328
Score = 72 (30.4 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLL 138
+S + D++ ++ + L V ++ P L+ A + + G GKR RP +LL
Sbjct: 35 YSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAG--GKRIRPVFVLL 82
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 279 (103.3 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 70/259 (27%), Positives = 133/259 (51%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A E+IH+A+L+HDDV+D++ RRG+ ++ GNK +++ GD + +++ + + S K
Sbjct: 74 LAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNK-MSIHIGDRIFAKSLLLIDSCK 132
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
N GE Q+ + + S+ Y+ K KTA L+S SC+ ++A
Sbjct: 133 NNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMAN 192
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM--E 347
+ V YG +G+A+Q+IDD+LDFT LGK SD+R G+IT P+L A+ +
Sbjct: 193 VSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRD 252
Query: 348 EFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDED 407
+ +L ++ ++++N++ ++ + GI + + +P++ +D
Sbjct: 253 KKHELWRELQNLPQNNANIEQIIKEIKYLGGISEAYAWAKNYIEKAISAFELVPKSPVKD 312
Query: 408 VTKSRRALLDLTHRVITRN 426
L++ ++ RN
Sbjct: 313 T------FLEIAQFIVQRN 325
Score = 56 (24.8 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 81 DSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
D +++L F LV ++L + + L V L A + K G GKR RP LL A
Sbjct: 6 DQEKKL--FELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAG--GKRLRPAFALLAA 61
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 279 (103.3 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 70/259 (27%), Positives = 133/259 (51%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A E+IH+A+L+HDDV+D++ RRG+ ++ GNK +++ GD + +++ + + S K
Sbjct: 74 LAVALELIHMATLVHDDVVDNSMLRRGLPTVKANWGNK-MSIHIGDRIFAKSLLLIDSCK 132
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
N GE Q+ + + S+ Y+ K KTA L+S SC+ ++A
Sbjct: 133 NNYVAKVLAEVSVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMAN 192
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM--E 347
+ V YG +G+A+Q+IDD+LDFT LGK SD+R G+IT P+L A+ +
Sbjct: 193 VSPRVVNALKQYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRD 252
Query: 348 EFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDED 407
+ +L ++ ++++N++ ++ + GI + + +P++ +D
Sbjct: 253 KKHELWRELQNLPQNNANIEQIIKEIKYLGGISEAYAWAKNYIEKAISAFELVPKSPVKD 312
Query: 408 VTKSRRALLDLTHRVITRN 426
L++ ++ RN
Sbjct: 313 T------FLEIAQFIVQRN 325
Score = 56 (24.8 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 81 DSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
D +++L F LV ++L + + L V L A + K G GKR RP LL A
Sbjct: 6 DQEKKL--FELVKEDLRKIEQELIKEVSERNEFLHDPAMHLLKAG--GKRLRPAFALLAA 61
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 271 (100.5 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 76/242 (31%), Positives = 123/242 (50%)
Query: 175 EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXX 234
E++H+ASL+HDD +D++D RRG S++ +K A+ G FLL+RA +A++ N
Sbjct: 74 ELVHMASLVHDDYIDNSDMRRGNTSVHIAF-DKDTAIRTGHFLLARALQNIATINNSKFH 132
Query: 235 XXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEV 294
GE QM + S Y+++ KTA LI SC + L+ Q E
Sbjct: 133 QIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCH-LGALSSQLDEQ 191
Query: 295 AILAF-DYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM-----EE 348
+ +G +G++YQ+IDD+LD+T A+LGK SDIR+G IT P++ A+ ++
Sbjct: 192 STYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQD 251
Query: 349 FPQLRTVVEQGFEDSSNVDIALEYLG---KSRGIQKTRELXXXXXXXXXXXIDSLPENND 405
+L VV+ S++ D +Y+ K GI+ L + L ++N
Sbjct: 252 DDKLEAVVKH--LTSTSDDEVYQYIVSQVKQYGIEPAELLSRKYGDKAKYHLSQLQDSNI 309
Query: 406 ED 407
+D
Sbjct: 310 KD 311
Score = 49 (22.3 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 101 KRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLL 138
KRL + ++ + AA + G GKR RP +LL
Sbjct: 19 KRLYECIQSDSETINKAAHHILSSG--GKRVRPMFVLL 54
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 59/139 (42%), Positives = 89/139 (64%)
Query: 210 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKT 269
AVLAGD +LS A +ALA + N GE +Q+ + ++ +Y++KT
Sbjct: 7 AVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKT 66
Query: 270 YYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGS 329
+ KTASLI+NSCKA+++L V +A+ YGKN+G+A+QLIDDVLDFT S +GK +
Sbjct: 67 FKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPT 126
Query: 330 LSDIRHGIITAPILFAMEE 348
+D++ G+ T P+LFA ++
Sbjct: 127 SADLKLGLATGPVLFACQQ 145
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 82/263 (31%), Positives = 129/263 (49%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A E IH A+LLHDDV+D++ RRG + N + NK +VL GD+L +R+ +
Sbjct: 77 LAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKS-SVLVGDYLFARSFQLMVETG 135
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
+ GE +QMT +SD R Y+Q KTA+L S + + ++AG
Sbjct: 136 SLRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGVIAG 195
Query: 290 -QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
A+V L F+YG LG+A+Q+ DD+LD+ G + + GK D R +T P++ A+ +
Sbjct: 196 VPEAQVRAL-FEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAVAQ 254
Query: 349 FPQ------LRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPE 402
+RT+ E+G + +++ AL + K + TR ++ LP
Sbjct: 255 ATDEERAFWVRTI-EKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTALELLP- 312
Query: 403 NNDEDVTKSRRALLDLTHRVITR 425
N E R L DL V+ R
Sbjct: 313 -NHE----IRTMLSDLADYVVAR 330
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 82/263 (31%), Positives = 129/263 (49%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
+A E IH A+LLHDDV+D++ RRG + N + NK +VL GD+L +R+ +
Sbjct: 77 LAATVEFIHTATLLHDDVVDESGQRRGRPTANLLWDNKS-SVLVGDYLFARSFQLMVETG 135
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
+ GE +QMT +SD R Y+Q KTA+L S + + ++AG
Sbjct: 136 SLRVLDILANAAATIAEGEVLQMTAASDLRTDESVYLQVVRGKTAALFSAATEVGGVIAG 195
Query: 290 -QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
A+V L F+YG LG+A+Q+ DD+LD+ G + + GK D R +T P++ A+ +
Sbjct: 196 VPEAQVRAL-FEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAVAQ 254
Query: 349 FPQ------LRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPE 402
+RT+ E+G + +++ AL + K + TR ++ LP
Sbjct: 255 ATDEERAFWVRTI-EKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTALELLP- 312
Query: 403 NNDEDVTKSRRALLDLTHRVITR 425
N E R L DL V+ R
Sbjct: 313 -NHE----IRTMLSDLADYVVAR 330
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 80/258 (31%), Positives = 126/258 (48%)
Query: 173 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXX 232
+ EMIH+A+L HDDV+D+A RRG S N GN V A+LAGD+LL+ A +A L
Sbjct: 85 VIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNV-AILAGDYLLATASRLVARL-GPE 142
Query: 233 XXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTA 292
G+ + +S+ S++ Y++ KT SLI + + + +G T
Sbjct: 143 AVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATD 202
Query: 293 EVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEF-P- 350
E G +G A+Q+ DD++D S GK +D+R G+ T P+L+A+ E P
Sbjct: 203 EQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPD 262
Query: 351 --QLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENNDEDV 408
+LR ++ +D + V AL L S G+ + +++ + LP DV
Sbjct: 263 CARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLP-----DV 317
Query: 409 TKSRRALLDLTHRVITRN 426
RRAL L ++R+
Sbjct: 318 P-GRRALAALVDYTVSRH 334
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 35/90 (38%), Positives = 47/90 (52%)
Query: 120 YFFKMGVEGKRFRPTVLLLMATALNVRV-PEPLHDGVEDALATELRTRQQCIAEITEMIH 178
+ F G GKRFRP + T L+ ++ P+P DA A + + EMIH
Sbjct: 50 HLFNAG--GKRFRP-----LFTVLSAQIGPQP------DAAAVTVA------GAVIEMIH 90
Query: 179 VASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
+A+L HDDV+D+A RRG S N GN V
Sbjct: 91 LATLYHDDVMDEAQVRRGAPSANAQWGNNV 120
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 74/224 (33%), Positives = 114/224 (50%)
Query: 144 NVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFV 203
NV+ + L + +A E + A I E+IH+ASLLHDD++D+++ RRG S+N
Sbjct: 26 NVKSGKKLRSKLLLTIADESEIAFKICAAI-ELIHLASLLHDDIIDESELRRGARSVNAE 84
Query: 204 MGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD 263
G K A++ GD L S+A L+ + + GE M + + +
Sbjct: 85 FGTKN-ALMLGDILYSKAFYELSKM-DARFASIISDAVVKLAIGELMDVDLGEKFNINKE 142
Query: 264 YYMQKTYYKTASLISNSCKAIALLAG-QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTS 322
Y++ Y KTA LI S + A+LAG + A +YGKNLGLA+Q+IDD+LD
Sbjct: 143 AYLKMIYNKTAVLIEASARCGAILAGLYEKDFA----EYGKNLGLAFQMIDDILDIKSDE 198
Query: 323 ASLGKGSLSDIRHGIITAPILFAMEEFP-QLRTVVEQGFEDSSN 365
LGK +++D + G T P ++ E Q R ++ F+ N
Sbjct: 199 KILGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQTLFKKDLN 242
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 81/276 (29%), Positives = 133/276 (48%)
Query: 158 ALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFL 217
A E Q +A + E IH A+LLHDDV+D + RRG + N + GN +VL GDFL
Sbjct: 67 ACGYEQDVEHQELATVIEFIHTATLLHDDVVDKSTQRRGQKTANALWGNSA-SVLVGDFL 125
Query: 218 LSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLI 277
SRA LA N GE Q+ +D Y + KTA L
Sbjct: 126 YSRAFQILARRSNVPIMKILATTTNQISEGEVWQLMNQNDPDIDEVTYYEVIRRKTAQLF 185
Query: 278 SNSCKAIALLA--GQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH 335
S + + A++A +T + ++ AF G +LG+AYQ+IDD+LD++ +++L K D+
Sbjct: 186 SAAAEIGAIVATKNETWQKSMAAF--GFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAE 243
Query: 336 GIITAPILFAMEEF-P----QLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXX 390
G T P+++A ++ P +R ++ G D ++ ++ + ++R + T++
Sbjct: 244 GKATLPLIYAKQQAQPAQAEHIREAIKNG--DLDDLQSIMKLMDETRAREYTQQCALKQA 301
Query: 391 XXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
+ LP + D AL LT V++R+
Sbjct: 302 EKAHTYLQQLPPSPYRD------ALNALTQFVVSRH 331
Score = 114 (45.2 bits), Expect = 0.00075, P = 0.00075
Identities = 40/130 (30%), Positives = 61/130 (46%)
Query: 80 TDSQEQLDPFSL---VADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVL 136
TD Q + SL V +++ + + + + VP + + + + G GKR RP V+
Sbjct: 4 TDKQATFEIESLRQPVQNDIEAVDALIVKELSSHVPLIETITHHIIQSG--GKRLRPLVV 61
Query: 137 LLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRG 196
LL A A G E + Q +A + E IH A+LLHDDV+D + RRG
Sbjct: 62 LLTARAC----------GYEQDV------EHQELATVIEFIHTATLLHDDVVDKSTQRRG 105
Query: 197 IGSLNFVMGN 206
+ N + GN
Sbjct: 106 QKTANALWGN 115
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 90/344 (26%), Positives = 156/344 (45%)
Query: 90 SLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
S +A+ I+ + + + + P +L SA+ Y G GKR RPT+LLL A +L V
Sbjct: 9 SAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAG--GKRLRPTILLLAAESL-ADV- 64
Query: 149 EPLHDGVEDALATELRTRQQCIAEIT-EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNK 207
EPL + A ++ E+I +L+HDD++DD D RRG+ +++ +
Sbjct: 65 EPLSADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLE 124
Query: 208 VLAVLAGDFLLSRACVALASL-----KNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSM 262
A+LAGD L S+A + ++ G+ + + + +
Sbjct: 125 T-AILAGDTLYSKAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDVDFENRSDVTT 183
Query: 263 DYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTS 322
+ Y++ +KTA L + + A+L G E YG ++G A+Q+ DD+LD T S
Sbjct: 184 EEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPS 243
Query: 323 ASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKT 382
LGK SD+ T L A ++ + +V D+ ++ A++ L + I
Sbjct: 244 DELGKQRGSDLVENKRTVITLHARDQGIDVEGLVSDDPSDAE-IEAAVQTLEDAGSIDFA 302
Query: 383 RELXXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
RE+ +D LPEN ++R+ L D+ ++ R+
Sbjct: 303 REMALDLVTSGKERLDVLPEN------EARQLLEDIADFLVERS 340
>ZFIN|ZDB-GENE-040718-43 [details] [associations]
symbol:pdss2 "prenyl (decaprenyl) diphosphate
synthase, subunit 2" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000092 Pfam:PF00348
ZFIN:ZDB-GENE-040718-43 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:57107 HOVERGEN:HBG058860 KO:K12505 EMBL:BC075908
IPI:IPI00489656 RefSeq:NP_001002351.1 UniGene:Dr.88524
ProteinModelPortal:Q6DHQ9 STRING:Q6DHQ9 PRIDE:Q6DHQ9 GeneID:436624
KEGG:dre:436624 InParanoid:Q6DHQ9 NextBio:20831069 Bgee:Q6DHQ9
Uniprot:Q6DHQ9
Length = 370
Score = 264 (98.0 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 82/293 (27%), Positives = 146/293 (49%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A +R +V + P L +A + + + R V+LLM+ A +P
Sbjct: 49 LLSDELSNVAMHVRKLVGTKHPLLNTARGFVYDSR-NNLQMRGLVVLLMSKAAGPSSSDP 107
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKVL 209
+HD ++ + + Q+ +AEITE+IH A L+H +++ + G L + GNK +
Sbjct: 108 IHD----SMVSGIYPSQRNLAEITELIHTAFLVHRGIVNLKEWTNSDGPLKDMQFGNK-M 162
Query: 210 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQ-RCSMDYYMQK 268
AVL+GDFLL+ AC LA L + G + + S+++ ++ + +
Sbjct: 163 AVLSGDFLLANACTGLAQLNDTKVVELISSAIGDVVQGIYHESSGSAEEDSLTVASWEDQ 222
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
+ +L++ SC+A LA E LAF YGK+L L ++L ++ F + G
Sbjct: 223 AFLSHGALLAKSCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNSELQPFVKS------G 276
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQK 381
S + H + +AP++F + R +Q + + N+ ++Y K RG+ K
Sbjct: 277 SEGAVFH-LDSAPVVFHRQIVGPERW--QQQLKQAQNMSRQIDYT-KLRGLIK 325
>UNIPROTKB|F1NMS4 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 OMA:QIGEAQE GO:GO:0050347
EMBL:AADN02002114 EMBL:AADN02002115 EMBL:AADN02002116
EMBL:AADN02002117 EMBL:AADN02002118 IPI:IPI00590994
Ensembl:ENSGALT00000024716 Uniprot:F1NMS4
Length = 359
Score = 256 (95.2 bits), Expect = 6.7e-21, P = 6.7e-21
Identities = 86/340 (25%), Positives = 161/340 (47%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A + + + R V+LL++ A P
Sbjct: 33 LLSDELSNIAMQVRKLVGTKHPLLDTARGFVYDSR-NNLQMRGLVVLLISKAAG---PST 88
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKVL 209
+ + + + + Q+ +AEITE+IH A L+H +++ + + G L + GNK +
Sbjct: 89 AELSFQHNMVSGIYSSQRSLAEITELIHTAFLVHRGIVNIGELKSCDGPLKDMQFGNK-M 147
Query: 210 AVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY----Y 265
AVL+GDFLL+ AC +LA L+N G + + SS+ + D +
Sbjct: 148 AVLSGDFLLANACTSLAQLQNTKVVELISSAIGDLVQGIYYENSRSSENCLTDDIGISTW 207
Query: 266 MQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 325
++ + ++L++ SC+A LA +AE+ +AF YGK++ ++++L D+ F S+S
Sbjct: 208 KEQVFLSHSALLAKSCQAAMELAKHSAEMQDMAFRYGKHMSMSHKLHSDLQPFVKESSSD 267
Query: 326 GKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTREL 385
+ ++ L Q+R EQ + + E + +G+ +L
Sbjct: 268 AMAFSLNCAPAVLHQEFLGRDAWIKQIRE--EQSLHACVSQQLQ-EAIKAGKGVTSAIDL 324
Query: 386 XXXXXXXXXXXIDSLPENNDEDVTKSRRALLDLTHRVITR 425
++S P + ++R AL ++ H V TR
Sbjct: 325 CRCHGNRALAALESFPPS------EARAALANIVHAV-TR 357
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 240 (89.5 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 66/192 (34%), Positives = 97/192 (50%)
Query: 158 ALATELRTRQQCIAEIT-EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDF 216
AL T + A T E+IH A+L+HDDV+D+ RRG ++ + GNK+ +VL GDF
Sbjct: 58 ALCKNADTNAEIRAAATIELIHNATLMHDDVVDENSIRRGKPNIKSIHGNKI-SVLTGDF 116
Query: 217 LLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASL 276
LLS A + KN GE +Q+ S + S Y++ KTA L
Sbjct: 117 LLSVAFEIILECKNLSVVLLLSKTAKQLSEGEMLQLQ-SIGEIVSESEYLEVIARKTAVL 175
Query: 277 ISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHG 336
S + + A+L G+ V IL + G +G+A+Q+ DDVLD+ G +GK +D R
Sbjct: 176 FSAAAEIAAILTGKQEYVVILR-EIGFLIGMAFQITDDVLDY-GEPQEVGKSVGNDFREC 233
Query: 337 IITAPILFAMEE 348
T P + A +
Sbjct: 234 KFTLPCVIAYRD 245
>UNIPROTKB|Q86YH6 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
GO:GO:0005739 GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0006744 GO:GO:0046982 Orphanet:139485
GO:GO:0051290 GO:GO:0050878 Orphanet:255249 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AB210839 EMBL:AF254956 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 EMBL:BC029491 EMBL:BC039906
IPI:IPI00384708 IPI:IPI00643460 RefSeq:NP_065114.3
UniGene:Hs.486095 ProteinModelPortal:Q86YH6 SMR:Q86YH6
STRING:Q86YH6 PhosphoSite:Q86YH6 DMDM:73620006 PaxDb:Q86YH6
PRIDE:Q86YH6 Ensembl:ENST00000369031 Ensembl:ENST00000369037
GeneID:57107 KEGG:hsa:57107 UCSC:uc003prt.2 UCSC:uc003prv.3
CTD:57107 GeneCards:GC06M107473 HGNC:HGNC:23041 HPA:HPA029685
HPA:HPA029686 MIM:610564 MIM:614652 neXtProt:NX_Q86YH6
PharmGKB:PA134957167 HOGENOM:HOG000294216 HOVERGEN:HBG058860
InParanoid:Q86YH6 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
PhylomeDB:Q86YH6 BioCyc:MetaCyc:HS15203-MONOMER GenomeRNAi:57107
NextBio:62953 ArrayExpress:Q86YH6 Bgee:Q86YH6 CleanEx:HS_PDSS2
Genevestigator:Q86YH6 GermOnline:ENSG00000164494 GO:GO:0050347
Uniprot:Q86YH6
Length = 399
Score = 247 (92.0 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 80/320 (25%), Positives = 153/320 (47%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A + R V+LL++ A P
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSW-NSLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
++ ++ + + + + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+
Sbjct: 128 VNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY---- 264
A+L+GDFLL+ AC LA L+N G + +TS + + D
Sbjct: 188 -AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGIST 246
Query: 265 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 324
+ ++T+ +L++ SC+A LA AEV +AF YGK++ +++++ DV F S
Sbjct: 247 WKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTS 306
Query: 325 LGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQG-FEDSSNVDIAL--EYLGKSRGIQK 381
+ + +AP++ E + + + G ++ +D A E + +G+
Sbjct: 307 ------DSMTFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGRLDYAKLRERIKAGKGVTS 360
Query: 382 TRELXXXXXXXXXXXIDSLP 401
+L ++S P
Sbjct: 361 AIDLCRYHGNKALEALESFP 380
>UNIPROTKB|A6QR05 [details] [associations]
symbol:PDSS2 "PDSS2 protein" species:9913 "Bos taurus"
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
eggNOG:COG0142 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE
OrthoDB:EOG44QT18 GO:GO:0050347 EMBL:DAAA02025951 EMBL:DAAA02025952
EMBL:DAAA02025953 EMBL:DAAA02025954 EMBL:BC150063 IPI:IPI00704753
RefSeq:NP_001093855.1 UniGene:Bt.18477 STRING:A6QR05
Ensembl:ENSBTAT00000029142 GeneID:521115 KEGG:bta:521115
InParanoid:A6QR05 NextBio:20873244 Uniprot:A6QR05
Length = 395
Score = 242 (90.2 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 92/365 (25%), Positives = 169/365 (46%)
Query: 48 VLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMV 107
V+ CR S S PA +Q+ ++ ++ S L L++DEL +A ++R +V
Sbjct: 30 VISCRGQSSRS-PAQW---NQVVSEAEKIVGYPTSFMSLR--CLLSDELCNIAMQVRKLV 83
Query: 108 VAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDA-LATELRTR 166
+ P L + + R V+LL++ A P ++ ++ + + + +
Sbjct: 84 GTQHPLLTTVRGLIHDRQ-NNLQLRGLVVLLISKAAG---PNSVNASCQNYDMVSGIYSC 139
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKVLAVLAGDFLLSRACVAL 225
Q+ +AEITE+IH A L+H +++ + + G L + GNK+ A+L+GDFLL+ AC L
Sbjct: 140 QRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKI-AILSGDFLLANACNGL 198
Query: 226 ASLKNXXXXXXXXXXXXXXXXGETMQMTT-SSDQRCSMDY----YMQKTYYKTASLISNS 280
A L+N G + +T + + R + D + ++T+ +L++ S
Sbjct: 199 ALLQNTKVVELLASALMDLVQGVYYENSTLAKENRITDDIGISTWKEQTFLSHGALLAKS 258
Query: 281 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF----TGTSASLGKGSLSDIRHG 336
C+A LA AEV +AF YGK++ +++++ D+L F TG S + S + H
Sbjct: 259 CQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLLPFIKEKTGDSLTFNLNSAPVVLHQ 318
Query: 337 IITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXX 396
L+ Q+R E+G D + + E + +G+ +L
Sbjct: 319 EFLGRDLW----IKQIREAQEKGRLDYAKLR---ETIKAGKGVTSAIDLCRYHGNKALEA 371
Query: 397 IDSLP 401
++S P
Sbjct: 372 LESFP 376
>UNIPROTKB|J9NVK1 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GeneTree:ENSGT00530000063378
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
KO:K12505 OMA:QIGEAQE EMBL:AAEX03008588 EMBL:AAEX03008589
EMBL:AAEX03008590 RefSeq:XP_539071.2 Ensembl:ENSCAFT00000043165
GeneID:481950 KEGG:cfa:481950 Uniprot:J9NVK1
Length = 400
Score = 235 (87.8 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 77/321 (23%), Positives = 153/321 (47%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A+ + R V+LL++ A P
Sbjct: 72 LLSDELSNIALQVRKLVGTQHPLLTTASGLVHDSR-HNLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
++ ++ + + + + Q+ +AEITE+IH A L+H +++ + + G L + GNK+
Sbjct: 128 MNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQR-----CSMD 263
A+L+GDFLL+ AC LA L+N G + +TS+ + +
Sbjct: 188 -AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSAKENHITEDIGIS 246
Query: 264 YYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSA 323
+ ++T+ +L++ SC+A LA A+V +AF YGK++ +++++ D+ F
Sbjct: 247 TWKEQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHMAMSHKINSDLQPFIKEKT 306
Query: 324 SLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQG-FEDSSNVDIAL--EYLGKSRGIQ 380
S + + +AP++ E + + + G ++ +D A E + +G+
Sbjct: 307 S------DSVTFNLNSAPVVLHQEFLGRDLWMKQIGEAQEKGRLDYAKLRETIKAGKGVT 360
Query: 381 KTRELXXXXXXXXXXXIDSLP 401
+L ++S P
Sbjct: 361 SAIDLCRYHGNKALEALESFP 381
>RGD|1359372 [details] [associations]
symbol:Pdss2 "prenyl (decaprenyl) diphosphate synthase, subunit
2" species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA;ISO] [GO:0050878 "regulation of body fluid
levels" evidence=IEA;ISO] [GO:0051290 "protein
heterotetramerization" evidence=IEA;ISO] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
RGD:1359372 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0006744 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OrthoDB:EOG44QT18
EMBL:BC085898 IPI:IPI00367901 RefSeq:NP_001014271.1
UniGene:Rn.20063 ProteinModelPortal:Q5U2R1 PRIDE:Q5U2R1
GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372 NextBio:687727
ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1 Uniprot:Q5U2R1
Length = 401
Score = 234 (87.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 71/244 (29%), Positives = 124/244 (50%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A F + R V+LL++ A P
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHP-LLTTARGFVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKI 188
Query: 209 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD----- 263
AVL+GDFLL+ AC LA L+N G + + S+ D
Sbjct: 189 -AVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRIS 247
Query: 264 YYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSA 323
+ ++T+ +L++ SCKA LA A V +AF YGK++ +++++ D+ F A
Sbjct: 248 TWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKDKA 307
Query: 324 SLGK 327
S K
Sbjct: 308 SDSK 311
>UNIPROTKB|Q5U2R1 [details] [associations]
symbol:Pdss2 "Decaprenyl-diphosphate synthase subunit 2"
species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0050878 "regulation of body fluid levels"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 RGD:1359372 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0006744 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216 HOVERGEN:HBG058860
KO:K12505 OrthoDB:EOG44QT18 EMBL:BC085898 IPI:IPI00367901
RefSeq:NP_001014271.1 UniGene:Rn.20063 ProteinModelPortal:Q5U2R1
PRIDE:Q5U2R1 GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372
NextBio:687727 ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1
Uniprot:Q5U2R1
Length = 401
Score = 234 (87.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 71/244 (29%), Positives = 124/244 (50%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A F + R V+LL++ A P
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHP-LLTTARGFVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKI 188
Query: 209 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD----- 263
AVL+GDFLL+ AC LA L+N G + + S+ D
Sbjct: 189 -AVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRIS 247
Query: 264 YYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSA 323
+ ++T+ +L++ SCKA LA A V +AF YGK++ +++++ D+ F A
Sbjct: 248 TWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKDKA 307
Query: 324 SLGK 327
S K
Sbjct: 308 SDSK 311
>MGI|MGI:1918615 [details] [associations]
symbol:Pdss2 "prenyl (solanesyl) diphosphate synthase,
subunit 2" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IDA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IDA]
[GO:0050878 "regulation of body fluid levels" evidence=IMP]
[GO:0051290 "protein heterotetramerization" evidence=IPI]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 MGI:MGI:1918615 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006744
GO:GO:0046982 GO:GO:0051290 GO:GO:0050878 eggNOG:COG0142
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216
HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
EMBL:AB210840 EMBL:AK017329 EMBL:AK140091 EMBL:BC147693
EMBL:BC147694 EMBL:BC147752 EMBL:BC147753 IPI:IPI00316693
IPI:IPI00659599 IPI:IPI00672429 RefSeq:NP_001161761.1
RefSeq:NP_082048.2 UniGene:Mm.490430 ProteinModelPortal:Q33DR3
SMR:Q33DR3 STRING:Q33DR3 PhosphoSite:Q33DR3 PRIDE:Q33DR3
Ensembl:ENSMUST00000095725 Ensembl:ENSMUST00000159139 GeneID:71365
KEGG:mmu:71365 UCSC:uc007ezh.2 UCSC:uc007ezi.2 UCSC:uc011xdk.1
InParanoid:B2RWA7 ChiTaRS:PDSS2 NextBio:333637 Bgee:Q33DR3
Genevestigator:Q33DR3 GermOnline:ENSMUSG00000038240 Uniprot:Q33DR3
Length = 401
Score = 228 (85.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 79/321 (24%), Positives = 149/321 (46%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V P L +A + R V+LL++ A P
Sbjct: 73 LLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSR-HNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKI 188
Query: 209 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMD----- 263
A+L+GDFLL+ AC LA L+N G + + S+ + D
Sbjct: 189 -AILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGIS 247
Query: 264 YYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSA 323
+ ++T+ +L++ SC+A LA A V +AF YGK++ +++++ D+ F A
Sbjct: 248 TWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFIKDKA 307
Query: 324 SLGKGSLSDIRHGIITAPILFAMEEFPQ---LRTVVEQGFEDSSNVDIALEYLGKSRGIQ 380
S K + +AP++ E + ++ + E + S N E + +G+
Sbjct: 308 SDSK------TFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGSLNYSKLRETIKAGKGVT 361
Query: 381 KTRELXXXXXXXXXXXIDSLP 401
+L ++S P
Sbjct: 362 SAIDLCRYHGNKALEALESFP 382
>UNIPROTKB|I3LGK0 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
Ensembl:ENSSSCT00000024393 OMA:DIVELMS Uniprot:I3LGK0
Length = 241
Score = 209 (78.6 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 61/205 (29%), Positives = 110/205 (53%)
Query: 130 RFRPTVLLLMATALNVRVPEPLHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVL 188
+ R V+LL++ A P ++ ++ + + + + Q+ +AEITE+IH A L+H ++
Sbjct: 12 QLRGLVVLLISKAAG---PSSVNASCQNYDMVSGIYSCQRSLAEITELIHTALLVHRGIV 68
Query: 189 DDADTRRGIGSL-NFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXG 247
+ + + G L + GNK+ A+L+GDFLL+ AC LA L+N G
Sbjct: 69 NLNELQSSDGPLKDMQFGNKI-AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQG 127
Query: 248 ETMQMTTSS-DQRCSMDY----YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYG 302
+ +TS+ + R + D + ++T+ +L++ SC+A LA AEV +AF YG
Sbjct: 128 VYHENSTSAKENRITDDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYG 187
Query: 303 KNLGLAYQLIDDVLDFTG--TSASL 325
K++ +++++ D+ F TS SL
Sbjct: 188 KHMAMSHKINSDLQPFIKEKTSDSL 212
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 213 (80.0 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 60/187 (32%), Positives = 91/187 (48%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS----- 227
EMIH SL+HDD+ +DD D RRG + + V G + +A+LAGD LL+ A + ++S
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFG-EAIAILAGDALLTEAFILISSPSYAA 132
Query: 228 ------LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSC 281
L G+ + M + ++ + KT +LI S
Sbjct: 133 AVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASI 192
Query: 282 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAP 341
KA A+L G A+ YG+ +GLA+Q+ DD+LD GT+ +GK + SD G T P
Sbjct: 193 KAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYP 252
Query: 342 ILFAMEE 348
+ + E
Sbjct: 253 AVLGLAE 259
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 213 (80.0 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 60/187 (32%), Positives = 91/187 (48%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS----- 227
EMIH SL+HDD+ +DD D RRG + + V G + +A+LAGD LL+ A + ++S
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFG-EAIAILAGDALLTEAFILISSPSYAA 132
Query: 228 ------LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSC 281
L G+ + M + ++ + KT +LI S
Sbjct: 133 AVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASI 192
Query: 282 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAP 341
KA A+L G A+ YG+ +GLA+Q+ DD+LD GT+ +GK + SD G T P
Sbjct: 193 KAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYP 252
Query: 342 ILFAMEE 348
+ + E
Sbjct: 253 AVLGLAE 259
>UNIPROTKB|I3LJ49 [details] [associations]
symbol:I3LJ49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Ensembl:ENSSSCT00000027318 OMA:NNCISEQ
Uniprot:I3LJ49
Length = 145
Score = 203 (76.5 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 51/151 (33%), Positives = 83/151 (54%)
Query: 279 NSC--KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHG 336
N+C + +++L V +A+ YGKN+G+A+QLIDDVLDFT S +GK
Sbjct: 9 NNCISEQVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKX-------- 60
Query: 337 IITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXX 396
+ T P+LFA ++FP++ ++ + F +VD A +Y+ +S G+Q+T L
Sbjct: 61 LATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRYCHEAIRE 120
Query: 397 IDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
I L + + R AL+ L+ V+TR+K
Sbjct: 121 ISKLRPSPE------REALIQLSEIVLTRDK 145
>FB|FBgn0037044 [details] [associations]
symbol:CG10585 species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] EMBL:AE014296 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 eggNOG:COG0142 GeneTree:ENSGT00530000063378
GO:GO:0000010 InterPro:IPR017446 PANTHER:PTHR12001 KO:K12505
EMBL:AY051597 RefSeq:NP_649277.1 UniGene:Dm.1022 SMR:Q9VP87
MINT:MINT-762100 EnsemblMetazoa:FBtr0078287 GeneID:40323
KEGG:dme:Dmel_CG10585 UCSC:CG10585-RA FlyBase:FBgn0037044
InParanoid:Q9VP87 OMA:IILAMQD OrthoDB:EOG4CFXQJ GenomeRNAi:40323
NextBio:818180 Uniprot:Q9VP87
Length = 448
Score = 138 (53.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 43/144 (29%), Positives = 81/144 (56%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DE++ +A LR +V + P L A++ G + ++LL++ A P
Sbjct: 90 LLSDEIANVALHLRKLVGSAHP-LMKTAKHLLYNGKNTMQAWGLIVLLVSKAAG-HAPS- 146
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLD-DADTRRG--IGSLNFV-MGN 206
+ D +D A L + Q+ +AE+TEMI ++ L+H+ V++ + T+ G + + + + GN
Sbjct: 147 VPDVEQDKSAGVLHS-QRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDDMSFGN 205
Query: 207 KVLAVLAGDFLLSRACVALASLKN 230
K+ +L GD+LL + LA+L+N
Sbjct: 206 KI-GLLTGDYLLGHSSAELANLRN 228
Score = 131 (51.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 275 SLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIR 334
SL+ SC+A LAGQ+ E+ A+ +GK+L LA+Q D F L D+
Sbjct: 308 SLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPL------DVT 361
Query: 335 HGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRG--IQKTRELXXXXXXX 392
+++AP+LF +E P + + +E G + N+D + G + KT+EL
Sbjct: 362 FSLVSAPVLFHLEHDPGMYSQLEAGKQSVDNIDYDKIHKAILAGPALAKTKELQRKHTAA 421
Query: 393 XXXXIDSLP 401
+ P
Sbjct: 422 ALAVLQHFP 430
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 208 (78.3 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 79/249 (31%), Positives = 117/249 (46%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P + A Y K G GKR RP VL+L A + PE L + A+ E C+
Sbjct: 30 PVIHQAMNYSLKAG--GKRLRP-VLMLAAGEWSGIAPEKL---LPAAVGVE------CL- 76
Query: 172 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS-- 227
H SL+HDD+ +D+ D RRG + + V G + +A+LAGD LL++A A
Sbjct: 77 ------HTYSLIHDDLPAMDNDDFRRGKPTNHKVFG-EAIAILAGDALLTKAFELTAKTL 129
Query: 228 --------LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISN 279
+ G+ + ++ SS+ + + + KTA LI
Sbjct: 130 EQGIPAERVVRVIQELAVASGSEGLIAGQVVDLS-SSEAKKDPEVLLYIHLNKTARLIRY 188
Query: 280 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIIT 339
S A +LAG T E DYG++LGLA+Q++DD+LD G +GK SD ++ +T
Sbjct: 189 SLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLT 248
Query: 340 APILFAMEE 348
LF +EE
Sbjct: 249 YVSLFGIEE 257
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 208 (78.3 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 79/249 (31%), Positives = 117/249 (46%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P + A Y K G GKR RP VL+L A + PE L + A+ E C+
Sbjct: 30 PVIHQAMNYSLKAG--GKRLRP-VLMLAAGEWSGIAPEKL---LPAAVGVE------CL- 76
Query: 172 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS-- 227
H SL+HDD+ +D+ D RRG + + V G + +A+LAGD LL++A A
Sbjct: 77 ------HTYSLIHDDLPAMDNDDFRRGKPTNHKVFG-EAIAILAGDALLTKAFELTAKTL 129
Query: 228 --------LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISN 279
+ G+ + ++ SS+ + + + KTA LI
Sbjct: 130 EQGIPAERVVRVIQELAVASGSEGLIAGQVVDLS-SSEAKKDPEVLLYIHLNKTARLIRY 188
Query: 280 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIIT 339
S A +LAG T E DYG++LGLA+Q++DD+LD G +GK SD ++ +T
Sbjct: 189 SLIAGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLT 248
Query: 340 APILFAMEE 348
LF +EE
Sbjct: 249 YVSLFGIEE 257
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 68/253 (26%), Positives = 117/253 (46%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
+L+ A+ + K G GKR RP + LL A L G+E E R +A
Sbjct: 17 RLSGASLHLIKAG--GKRLRPLITLLTARMLG---------GLE----AEARAIP--LAA 59
Query: 173 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXX 232
E H SL+HDD++D + RRG+ + + V G+ A+LAGD L + A +A +
Sbjct: 60 SIETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDD-WAILAGDTLHAAAFKMIADSREWG 118
Query: 233 XXXXXXXXXXXXXXGETMQMTTSS------DQRCSMDY--YMQKTYYKTASLISNSCKAI 284
+Q++ ++ +D Y+ KT +LI + +
Sbjct: 119 MSHEQAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIG 178
Query: 285 ALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 344
A+ AG +E+ + + G N G+A+Q+ DD+L G GK +D+R G T +++
Sbjct: 179 AVAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIY 238
Query: 345 AMEEFPQLRTVVE 357
A+++ + R +V+
Sbjct: 239 AVKKAGR-REIVD 250
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 176 (67.0 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 47/144 (32%), Positives = 70/144 (48%)
Query: 175 EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXX 234
EM+H ASL+HDD+LD RR + S G A+L GD+L++++ +A S
Sbjct: 80 EMMHSASLIHDDLLDQGLVRRNLPSAPEKFGPSG-ALLCGDYLIAKS-IAFISPYGEKVI 137
Query: 235 XXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEV 294
GE + + + DY+ + Y KTASL + S A G E+
Sbjct: 138 QDFGKAGMDMAEGEVLDLKLEDESFGENDYF-KCIYKKTASLFAISASIGAYTGGAEEEL 196
Query: 295 AILAFDYGKNLGLAYQLIDDVLDF 318
A +G LG AYQ++DD+L+F
Sbjct: 197 AERFSHFGNALGTAYQIVDDILEF 220
Score = 55 (24.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 105 SMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMA 140
S+ + E P L E+ G GKR RP +LLL++
Sbjct: 29 SITLIEDPGLKKMVEHVCHSG--GKRIRPIILLLVS 62
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 188 (71.2 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 82/286 (28%), Positives = 129/286 (45%)
Query: 77 IEDTDSQEQLDPFSLVADELSI-LAKRLRSMVVAEVPKLA-SAAEYFFKMGVEGKRFRPT 134
IE ++E + F + E +I + K L ++ + P + A Y G GKR RP
Sbjct: 67 IEAAQTEEPFN-FKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAG--GKRVRP- 122
Query: 135 VLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDAD 192
+L +A E + E+A+A C E MIH SL+HDD+ +D+ D
Sbjct: 123 -MLCLAAC------ELVGGNQENAMAAA------CAVE---MIHTMSLIHDDLPCMDNDD 166
Query: 193 TRRGIGSLNFVMGNKVLAVLAGDFLL---------SRACVALASLKNXXXXXXXXXXXXX 243
RRG + + + G V AVLAGD LL S A V + +
Sbjct: 167 LRRGKPTNHKIYGEDV-AVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEG 225
Query: 244 XXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT-AEVAILAFDYG 302
G+ + + + S++ +KTA+L+ +S A+L G T EV L +
Sbjct: 226 LVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLR-RFA 284
Query: 303 KNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
+ +GL +Q++DD+LD T +S LGK + D+ T P L +E+
Sbjct: 285 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEK 330
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 187 (70.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 85/297 (28%), Positives = 134/297 (45%)
Query: 73 SSSVIEDTDSQEQLDP-----FSLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGV 126
SSSV+ D+ Q +P S + + ++ K L S V P K+ A Y G
Sbjct: 56 SSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAG- 114
Query: 127 EGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDD 186
GKR RP VL + A L G E++ A C E MIH SL+HDD
Sbjct: 115 -GKRVRP-VLCIAACELV---------GGEESTAMPAA----CAVE---MIHTMSLIHDD 156
Query: 187 V--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXX 244
+ +D+ D RRG + + V G V AVLAGD LLS A LAS +
Sbjct: 157 LPCMDNDDLRRGKPTNHKVFGEDV-AVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVG 215
Query: 245 XXGETM--------QMTTSSDQRCSMD----YYMQKTY-YKTASLISNSCKAIALLAGQT 291
+ + Q+ S + ++ +++ + +KTA+L+ S A++ G +
Sbjct: 216 ELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGS 275
Query: 292 AEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
+ + + +GL +Q++DD+LD T +S LGK + D+ +T P + +E+
Sbjct: 276 DDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 182 (69.1 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 78/266 (29%), Positives = 117/266 (43%)
Query: 99 LAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDA 158
LA +L + + + PKL A Y +G GKR RP + + A++ L+D DA
Sbjct: 18 LAAKLEGLTIND-PKLIEAMRYGLLIG--GKRMRPYLAYITGEAVSA----DLND--IDA 68
Query: 159 LATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDF 216
+A L E IH SLLHDD+ +DD D RRG + + ++ A+LAGD
Sbjct: 69 VAGAL-----------ECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAF-DEATAILAGDA 116
Query: 217 LLSRACVALA----SLKNXXXXX----------XXXXXXXXXXXGETMQMTTSSDQRCSM 262
L + A LA S+ G+ + + + + S+
Sbjct: 117 LQTLAFDILANHTFSMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATG-KNISL 175
Query: 263 DYYMQKTYYKTASLISNSCKAIALLAGQ-TAEVAILAFDYGKNLGLAYQLIDDVLDFTGT 321
KT +L+ S A+ +GQ T E I+ +Y + +GLAYQ+ DD++D T T
Sbjct: 176 GELEVLHSLKTGALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTST 235
Query: 322 SASLGKGSLSDIRHGIITAPILFAME 347
LGK SDI T P L ++
Sbjct: 236 EEELGKPVGSDIAANKSTYPALLGLQ 261
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 184 (69.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 62/222 (27%), Positives = 101/222 (45%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GK RP ++ + A A +P H + A++ EL +H SL+HDD+
Sbjct: 72 GKAIRPALVFVAAEAAGA---DP-HSAIPGAVSVEL-------------VHNFSLVHDDL 114
Query: 188 LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKN---XXXXXXXXXXXXXX 244
+D + RR ++ + G+ +A+LAGD +LS A L +
Sbjct: 115 MDRDEHRRHRPTVWALWGD-AMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL 173
Query: 245 XXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKN 304
G+ S ++D ++ KTA+L++ S + ALLAG V YG++
Sbjct: 174 IRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRH 233
Query: 305 LGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM 346
+GLA+QL+DD+L G GK SD+R T P+ + +
Sbjct: 234 IGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTV 275
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 64/213 (30%), Positives = 101/213 (47%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXX 232
EMIH +SL+HDD+ +DDAD RRG + + V G +AVLAGD LL+ A + + +
Sbjct: 135 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEH-MAVLAGDALLALAFEHMTVVSSGL 193
Query: 233 XX---XXXXXXXXXXXXGETMQMTTSSDQRCSM-----DYYMQKTYY----KTASLISNS 280
G + CS D +++ + KTA+L+ +
Sbjct: 194 VAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKTAALLEAA 253
Query: 281 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITA 340
A++ G T E YG+ +GL +Q++DD++D T ++ LGK + D+ +T
Sbjct: 254 AVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTY 313
Query: 341 PILFAMEEFPQL-----RTVVEQ--GFEDSSNV 366
P L +E ++ R EQ GF DS+ V
Sbjct: 314 PRLIGLERSREVAEKLRREAAEQLLGF-DSNKV 345
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 180 (68.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/191 (30%), Positives = 92/191 (48%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFL-------LSRA 221
A E IH SL+HDD+ +DD D RRG+ + + G + A+LAGD L LS A
Sbjct: 70 AAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFG-EANAILAGDALQTLAFSILSDA 128
Query: 222 CVALASLKNXXXXXXXXXXXXXXXX---GETMQMTTSSDQRCSMDYYMQKTYYKTASLIS 278
+ S ++ G+ + + + +D + +KT +LI
Sbjct: 129 DMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEG-KHVPLDALERIHRHKTGALIR 187
Query: 279 NSCKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGI 337
+ + AL AG A+ D Y +++GLA+Q+ DD+LD G +A+LGK +D + G
Sbjct: 188 AAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGK 247
Query: 338 ITAPILFAMEE 348
T P L +E+
Sbjct: 248 STYPALLGLEQ 258
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXX 232
EMIH +SL+HDD+ +DDAD RRG + + G +AVLAGD LL+ A + + N
Sbjct: 132 EMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGED-MAVLAGDALLALAFEHMTFVSNGL 190
Query: 233 XX---XXXXXXXXXXXXGETMQMTTSSDQRCSM-----DYYMQKTYY----KTASLISNS 280
G + CS D +++ + KTA+L+ +
Sbjct: 191 VAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAA 250
Query: 281 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITA 340
A++ G T E Y + +GL +Q++DD+LD T ++ LGK + D+ G +T
Sbjct: 251 AVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTY 310
Query: 341 PILFAME 347
P L +E
Sbjct: 311 PRLIGLE 317
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA----------C 222
EMIH +SL+HDD+ +D+AD RRG + + V G +AVLAGD LL+ A
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGED-MAVLAGDALLALAFEHMTVVSSGL 193
Query: 223 VALASLKNXXXXXXXXXXXXXXXXGETMQMTTS--SDQRCSMDYYMQKTYYKTASLISNS 280
VA + G+ + + + + + +++ +KTA+L+ +
Sbjct: 194 VAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAA 253
Query: 281 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITA 340
++ G T + Y + +GL +Q++DD+LD T ++ LGK + D+ G +T
Sbjct: 254 AVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTY 313
Query: 341 PILFAME 347
P L +E
Sbjct: 314 PRLIGLE 320
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 174 (66.3 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 79/274 (28%), Positives = 119/274 (43%)
Query: 114 LASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEI 173
L A Y + G GKR RP LLL AT L G AL
Sbjct: 33 LREAMAYSLEAG--GKRLRP--LLLFATLQAFDKERNLGVGAACAL-------------- 74
Query: 174 TEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVAL------ 225
EMIH SL+HDD+ +DD D RRG + + V G + +AVLAGD LL+ A +
Sbjct: 75 -EMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFG-EAMAVLAGDGLLTYAFQVIMAYGQK 132
Query: 226 ---ASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY--YMQKTYYKTASLISNS 280
A K G + + ++ ++D Y+ K +KT L+ +
Sbjct: 133 EISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHK--HKTGKLLEFA 190
Query: 281 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITA 340
A ++L+ T E ++ K +GLA+Q+ DD+LD GT +GK SD+ + T
Sbjct: 191 VLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTY 250
Query: 341 PILFAMEEFPQ-LRTVVEQGFEDSSNVDIALEYL 373
LF ++ L + + + ++ + EYL
Sbjct: 251 TTLFTVDRAKDILDETIAKAKDAIGSLQLQDEYL 284
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 174 (66.3 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 79/274 (28%), Positives = 119/274 (43%)
Query: 114 LASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEI 173
L A Y + G GKR RP LLL AT L G AL
Sbjct: 33 LREAMAYSLEAG--GKRLRP--LLLFATLQAFDKERNLGVGAACAL-------------- 74
Query: 174 TEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVAL------ 225
EMIH SL+HDD+ +DD D RRG + + V G + +AVLAGD LL+ A +
Sbjct: 75 -EMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFG-EAMAVLAGDGLLTYAFQVIMAYGQK 132
Query: 226 ---ASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY--YMQKTYYKTASLISNS 280
A K G + + ++ ++D Y+ K +KT L+ +
Sbjct: 133 EISAEKKVRLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHK--HKTGKLLEFA 190
Query: 281 CKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITA 340
A ++L+ T E ++ K +GLA+Q+ DD+LD GT +GK SD+ + T
Sbjct: 191 VLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTY 250
Query: 341 PILFAMEEFPQ-LRTVVEQGFEDSSNVDIALEYL 373
LF ++ L + + + ++ + EYL
Sbjct: 251 TTLFTVDRAKDILDETIAKAKDAIGSLQLQDEYL 284
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 176 (67.0 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 100/349 (28%), Positives = 154/349 (44%)
Query: 56 SWSLPALHGIR-HQIHHQSSSVIEDTDSQEQL-----DPFSLVADELSILAKRLRSMVVA 109
S S+P I+ + + S+V+ T E + D S + + + + + L S V
Sbjct: 17 SASIPGFIKIQPFLLRRKLSTVLSVTARDEGIIHNHFDFTSYMIGKANAVNEALDSAVSL 76
Query: 110 EVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQ 168
P K+ A Y + GKR RP VL + A L G E+++A
Sbjct: 77 REPIKIHEAIRY--SLLARGKRVRP-VLCIAACELV---------GGEESVALPAA---- 120
Query: 169 CIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA----- 221
C E MIH SL+HDD+ +D+ D RRG + + V G V AVLAGD L+S A
Sbjct: 121 CAVE---MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDV-AVLAGDALISFAFEHLA 176
Query: 222 ---CVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSS-DQR-CSMDYYMQKTYYKTASL 276
V+ A + G+ + +T+ DQ ++ +KTA L
Sbjct: 177 TSTAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVL 236
Query: 277 ISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHG 336
+ + A++ G + E + + +GL +Q++DD+LD T +S LGK + D+
Sbjct: 237 LEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIAD 296
Query: 337 IITAPILFAME---EFPQ--LRTVVEQ--GFEDSSNVD--IAL-EYLGK 375
+T P L +E +F L EQ GF DSS V +AL Y+ K
Sbjct: 297 KLTYPKLMGLEKSKDFADKLLSDAHEQLHGF-DSSRVKPLLALANYIAK 344
>UNIPROTKB|B4DKU5 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 UniGene:Hs.486095 HGNC:HGNC:23041
HOGENOM:HOG000294216 HOVERGEN:HBG058860 EMBL:AK296717
IPI:IPI00908713 SMR:B4DKU5 STRING:B4DKU5 Ensembl:ENST00000453874
UCSC:uc011eal.1 Uniprot:B4DKU5
Length = 297
Score = 170 (64.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 52/177 (29%), Positives = 92/177 (51%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L +A + R V+LL++ A P
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSW-NSLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
++ ++ + + + + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+
Sbjct: 128 VNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 LAVLAGDFLLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQ-RCSMDY 264
A+L+GDFLL+ AC LA L+N G + +TS Q + +DY
Sbjct: 188 -AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKAQEKGRLDY 243
>ASPGD|ASPL0000062493 [details] [associations]
symbol:AN0654 species:162425 "Emericella nidulans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA] [GO:0016114
"terpenoid biosynthetic process" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:BN001308 GO:GO:0016740
EMBL:AACD01000010 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 KO:K00804 OrthoDB:EOG4QVGMM
RefSeq:XP_658258.1 ProteinModelPortal:Q5BFM6 SMR:Q5BFM6
STRING:Q5BFM6 EnsemblFungi:CADANIAT00002021 GeneID:2876433
KEGG:ani:AN0654.2 OMA:ICDDYLN Uniprot:Q5BFM6
Length = 396
Score = 169 (64.5 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 56/240 (23%), Positives = 103/240 (42%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
I ++ M+H ASLL DDV D++ RRGI + + G + + +++ A + LK
Sbjct: 120 ITKVVAMLHTASLLIDDVEDNSLLRRGIPVAHSIYGT-AQTINSANYVYFLALQEVQKLK 178
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIALLA 288
+ G+ M + C S D Y++ KT L + K + +
Sbjct: 179 SPAAIDIYVQELLNLHRGQGMDLFWRDTLTCPSEDEYLEMVGNKTGGLFRLAVKLMQAES 238
Query: 289 GQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
+ L LGL +Q+ DD L+ + T+ + KG D+ G + PI+ ++
Sbjct: 239 STGKDCVALV----NVLGLVFQICDDYLNLSDTTYTQNKGLCEDLTEGKFSFPIIHSIRS 294
Query: 349 FP---QLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPENND 405
P QL ++ Q +D AL+Y+ + + T+++ I+ + EN++
Sbjct: 295 NPGNHQLINILRQRTKDEEVKRYALQYMESTGSFKHTQDVVRQLRARALQLIEEI-ENSE 353
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 167 (63.8 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
++ E++H +LLHDDV+D TRRG ++ V G V A+L GD L + A L L
Sbjct: 94 VSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGV-AILLGDALHATAVRILTGLT 152
Query: 230 NXXXXXXXXXXXXXXXX----GETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 285
+ G+ ++D Y++ KTA+L + C A+
Sbjct: 153 DECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTAAL-TGCCCALG 211
Query: 286 LLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 344
L + I A + +G LGLA+Q +DD++ G GK +D+ T P++
Sbjct: 212 ALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVA 271
Query: 345 AMEEFPQLRT 354
A+ + T
Sbjct: 272 ALNSRSEAAT 281
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 158 (60.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 56/169 (33%), Positives = 80/169 (47%)
Query: 164 RTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA 221
RT C+A E++H SL+HDD+ +D+A TRRG S + G + LA+L GD LL+
Sbjct: 70 RTLPLCLA--IEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHG-EALALLTGDALLTLT 126
Query: 222 CVALASLKNXXXXXXXXXXXXXXXXGET-M---QMTTSSDQRCSMDYYMQKTYYKTASLI 277
L+S+ G M Q + S++ Q KTA L
Sbjct: 127 FELLSSMDESCTVKCAIIRVISDACGHRGMVAGQALDMGNLEPSLEAVKQIHKLKTARLF 186
Query: 278 SNSCKAIALLAG-QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 325
S +C++ A+LA TA LA YG+ LG A+Q DD+ D + L
Sbjct: 187 SAACESGAILAEVSTANQQALA-SYGETLGCAFQAKDDLCDINEDDSCL 234
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 158 (60.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 56/169 (33%), Positives = 80/169 (47%)
Query: 164 RTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA 221
RT C+A E++H SL+HDD+ +D+A TRRG S + G + LA+L GD LL+
Sbjct: 70 RTLPLCLA--IEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHG-EALALLTGDALLTLT 126
Query: 222 CVALASLKNXXXXXXXXXXXXXXXXGET-M---QMTTSSDQRCSMDYYMQKTYYKTASLI 277
L+S+ G M Q + S++ Q KTA L
Sbjct: 127 FELLSSMDESCTVKCAIIRVISDACGHRGMVAGQALDMGNLEPSLEAVKQIHKLKTARLF 186
Query: 278 SNSCKAIALLAG-QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 325
S +C++ A+LA TA LA YG+ LG A+Q DD+ D + L
Sbjct: 187 SAACESGAILAEVSTANQQALA-SYGETLGCAFQAKDDLCDINEDDSCL 234
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 159 (61.0 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 73/288 (25%), Positives = 125/288 (43%)
Query: 72 QSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
+ ++ + + + DP+ + E S+ ++ V E K+ A Y GKR
Sbjct: 71 EEGGIVSNANFTFEFDPYMMSKAE-SVNKALEEAIPVGEPLKIHEAMRYAILAA--GKRV 127
Query: 132 RPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LD 189
RP +L +A+ L G E+A C E MIH SL+ DD+ +D
Sbjct: 128 RP--ILCLASC-------ELVGGQENAAMPAA-----CAVE---MIHTMSLIKDDLPCMD 170
Query: 190 DADTRRGIGSLNFVMGNKVLAVLAGDFLLSRAC--VALASLKN-----XXXXXXXXXXXX 242
+ D RRG + + V G V A+L+G LLS A + A + +
Sbjct: 171 NDDLRRGKPTTHKVYGEGV-AILSGGALLSLAFEHMTTAEISSERMVWAVRELARSIGTR 229
Query: 243 XXXXGETMQMTTSS-D-QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFD 300
G+ M +++ D +++ +KTA L+ + A++ G + E
Sbjct: 230 GLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRK 289
Query: 301 YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
+ + +GL +Q++DD+LD T +S LGK + D G +T P L +E+
Sbjct: 290 FARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEK 337
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/201 (30%), Positives = 92/201 (45%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA---C--- 222
A E +H SL+HDD+ +DD D RRG + + V ++ AVLAGD L S A C
Sbjct: 66 ATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAH-VKWDEGTAVLAGDALHSLAFELCTRP 124
Query: 223 -VALASLK-NXXXXXXXXXXXXXXXXGETMQMTTSSDQR-CSMDYYMQKTYYKTASLISN 279
V A + G+ + + + + ++D + KT +LI
Sbjct: 125 EVGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEW 184
Query: 280 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIIT 339
+ A A+LAG A+ L Y + LGLA+Q+ DD+LD G + GK D G T
Sbjct: 185 AAAAGAVLAG--ADPDPLR-QYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKAT 241
Query: 340 APILFAMEEFP-QLRTVVEQG 359
L ++ + R +V+QG
Sbjct: 242 FVSLLGLDAAKARARDLVDQG 262
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/201 (30%), Positives = 92/201 (45%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA---C--- 222
A E +H SL+HDD+ +DD D RRG + + V ++ AVLAGD L S A C
Sbjct: 66 ATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAH-VKWDEGTAVLAGDALHSLAFELCTRP 124
Query: 223 -VALASLK-NXXXXXXXXXXXXXXXXGETMQMTTSSDQR-CSMDYYMQKTYYKTASLISN 279
V A + G+ + + + + ++D + KT +LI
Sbjct: 125 EVGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEW 184
Query: 280 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIIT 339
+ A A+LAG A+ L Y + LGLA+Q+ DD+LD G + GK D G T
Sbjct: 185 AAAAGAVLAG--ADPDPLR-QYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKAT 241
Query: 340 APILFAMEEFP-QLRTVVEQG 359
L ++ + R +V+QG
Sbjct: 242 FVSLLGLDAAKARARDLVDQG 262
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 74/253 (29%), Positives = 113/253 (44%)
Query: 110 EVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQC 169
E+ +L A Y G GKR RP + AL + PE + A A EL
Sbjct: 27 ELARLYEAMRYSVMNG--GKRVRPLLAYAACEALGGK-PEQANGA---ACAVEL------ 74
Query: 170 IAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVAL-- 225
IH SL+HDD+ +DD D RRG + + ++ A+LAGD L S A AL
Sbjct: 75 -------IHAYSLVHDDLPAMDDDDLRRGQPTTHKAF-DEACAILAGDGLQSLAFSALLD 126
Query: 226 -------ASLK-NXXXXXXXXXXXXXXXXGETMQMTTSS---DQRCSMDYYMQKTYYKTA 274
A ++ G+ + + + DQ+ +++Y M + +KT
Sbjct: 127 PALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQ-ALEY-MHR--HKTG 182
Query: 275 SLISNSCKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 333
+LI S AL +G+ + + A Y + +GLA+Q+ DD+LD +A+LGK +DI
Sbjct: 183 ALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADI 242
Query: 334 RHGIITAPILFAM 346
T P L +
Sbjct: 243 ARDKPTYPALLGL 255
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 152 (58.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 66/230 (28%), Positives = 101/230 (43%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P A K G GK FR +LL + + PE L+ ++ ALA E
Sbjct: 23 PFFNEALALMLKAG--GKHFRAQLLL---SVVQSNKPELLNQALDVALALEF-------- 69
Query: 172 EITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVAL--AS 227
IH SL+HDD+ +D+AD RRGI +L+ ++ A+L GD L + A + L A
Sbjct: 70 -----IHTYSLIHDDLPAMDNADFRRGIPTLHKSY-DETTAILVGDALNTEAFLVLSHAH 123
Query: 228 LKNXXXXXXXXXXXXXXXX-GETMQMTTS---SDQRCSMDYYMQKTYYKTASLISNSCKA 283
LK+ G + D+R S++ +KTA LI+ + K
Sbjct: 124 LKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKM 183
Query: 284 IALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDI 333
+ E + + G LGL +Q+ DD++D T + GK + +DI
Sbjct: 184 GCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDI 233
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 152 (58.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 54/174 (31%), Positives = 81/174 (46%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASL 228
A E IH SL+HDD+ +DD D RRG +++ ++ AVLAGD LL+ A LAS
Sbjct: 71 AAALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAF-DEATAVLAGDALLTLAFKILASS 129
Query: 229 KNXXXXX---------XXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISN 279
+ G+ + M R ++ + KT +LIS
Sbjct: 130 ETHDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPR-DLNTITRMQRLKTGALISY 188
Query: 280 SCKAIALLA-GQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 332
+ +A ++ + AE LA + +LGLAYQ+ DD+LD G + +GK D
Sbjct: 189 ALEAGGIIGHAREAERNALA-GFANDLGLAYQIADDILDAEGDESIVGKAVSKD 241
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 149 (57.5 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 51/190 (26%), Positives = 85/190 (44%)
Query: 169 CIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFL-------LS 219
C A I E IH SL+HDD+ +DD RRG +++ ++ A+LAGD L ++
Sbjct: 68 CAAAI-ECIHAYSLIHDDLPAMDDDALRRGQPTVHIAF-DEATAILAGDALQTLAFEIVT 125
Query: 220 RACVALASLKNXXXXXXXXXXXXXXXX--GETMQMTTSSDQRCSMDYYMQKTYYKTASLI 277
A + S ++ G+ + + S+D+ + Q KT +LI
Sbjct: 126 EAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLA-STDKHIDLKALTQLHNMKTGALI 184
Query: 278 SNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGI 337
S + + + A + ++ +GLA+Q+ DD+LD T+ LGK SD
Sbjct: 185 SCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNK 244
Query: 338 ITAPILFAME 347
T P L ++
Sbjct: 245 STFPQLLGLQ 254
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 150 (57.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 74/257 (28%), Positives = 114/257 (44%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP +L L A L G E+ LA + C E MIH SL+ DD+
Sbjct: 120 GKRVRP-ILCLAACELV---------GGEERLAIQAA----CAVE---MIHTMSLIKDDL 162
Query: 188 --LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLS-------RACVALASLKNXXXXXXXX 238
+D+ D RRG + + V G V A+L+G LL+ A V+ +
Sbjct: 163 PCMDNDDLRRGKPTTHKVFGESV-AILSGGALLALAFEHLTEADVSSKKMVRAVKELAKS 221
Query: 239 XXXXXXXXGETMQMTTSS-DQR-CSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAI 296
G+ +++ +Q ++ +KT SL+ S A++ G T +
Sbjct: 222 IGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIE 281
Query: 297 LAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAME---EFPQL- 352
++ + +GL +Q++DD+LD T +S LGK + D G +T P + +E EF +
Sbjct: 282 KVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKL 341
Query: 353 -RTVVE--QGFEDSSNV 366
R E QGF DS V
Sbjct: 342 KRDAREHLQGF-DSDKV 357
>UNIPROTKB|G4NEM8 [details] [associations]
symbol:MGG_00758 "Geranylgeranyl pyrophosphate synthase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CM001235 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00804
RefSeq:XP_003718242.1 ProteinModelPortal:G4NEM8 SMR:G4NEM8
EnsemblFungi:MGG_00758T0 GeneID:2674748 KEGG:mgr:MGG_00758
Uniprot:G4NEM8
Length = 412
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/223 (23%), Positives = 93/223 (41%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS 227
+ I + M+H ASLL DDV D++ RRG+ + + G + + +++ A L
Sbjct: 161 ELITHVVGMLHTASLLVDDVEDNSSLRRGLPVAHSIFGVPQ-TINSANYIYFAALQELKK 219
Query: 228 LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIAL 286
L N G+ M + C + D Y++ KT L K +
Sbjct: 220 LSNPEAVSIFAEELIHLHRGQGMDLFWRDTLTCPTEDDYLEMVGNKTGGLFRLGIKLMQA 279
Query: 287 LAGQTAEVAILAFDYGKNL-GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
+ + LA NL GL +Q+ DD + S KG D+ G + P++ +
Sbjct: 280 ESAFPTDCIPLA-----NLIGLIFQIRDDYQNLFSREYSNNKGMCEDLTEGKFSFPVIHS 334
Query: 346 MEEFP---QLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTREL 385
+ P QL +++Q D + A+ Y+ K+ + T+++
Sbjct: 335 IRSNPANLQLLNILKQKTTDEGVKNYAVSYMEKTGSFEYTKKV 377
>UNIPROTKB|Q9P885 [details] [associations]
symbol:carG "Geranylgeranyl pyrophosphate synthase"
species:29924 "Mucor circinelloides f. lusitanicus" [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 EMBL:AJ276129 ProteinModelPortal:Q9P885 SMR:Q9P885
Uniprot:Q9P885
Length = 303
Score = 144 (55.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 51/220 (23%), Positives = 101/220 (45%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
I +I M+H ASL+ DDV DD+D RRG+ + + G + ++++ A + L
Sbjct: 54 INKIIGMLHNASLMIDDVQDDSDLRRGVPVAHHIYGVPQ-TINTANYVIFLALQEVMKLN 112
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIALLA 288
G+ +++ C + + Y+ KT+ L+ A+ L+
Sbjct: 113 IPSMMQVCTEELINLHRGQGIELYWRDSLTCPTEEEYIDMVNNKTSGLLR---LAVRLM- 168
Query: 289 GQTAEVAILAFDYGKNL-GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAME 347
Q A + + + N+ G+ +Q+ DD ++ TS + KG D+ G + PI+ A+
Sbjct: 169 -QAASESDIDYTPLVNIIGIHFQVRDDYMNLQSTSYTNNKGFCEDLTEGKFSFPIIHAIR 227
Query: 348 EFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTRE 384
+ P R ++ + +++++ ALE + K+ + RE
Sbjct: 228 KDPSNRQLLNIISQKPTSIEVKKYALEVIRKAGSFEYVRE 267
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALA-- 226
A E IH SL+HDD+ +DD + RRG + + + ++ A+L GD L + A LA
Sbjct: 68 ASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH-IQFDEATAILTGDALQTLAFTILAEG 126
Query: 227 --SLKNXXXXXXXXXXXXXXXXGETM----QMTTSSDQRC-SMDYYMQKTYYKTASLISN 279
S + M + +++ R S++ KT +L+
Sbjct: 127 DLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRC 186
Query: 280 SCKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGII 338
+ + AL AG+ + D Y + +GLA+Q+ DD+LD + +LGK SD
Sbjct: 187 AIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKS 246
Query: 339 TAPILFAMEEFPQ-LRTVVEQ 358
T P L +E Q T++++
Sbjct: 247 TYPALLGLEGAQQKAHTLLQE 267
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 54/201 (26%), Positives = 90/201 (44%)
Query: 171 AEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALA-- 226
A E IH SL+HDD+ +DD + RRG + + + ++ A+L GD L + A LA
Sbjct: 68 ASAVECIHAYSLIHDDLPAMDDDELRRGKPTCH-IQFDEATAILTGDALQTLAFTILAEG 126
Query: 227 --SLKNXXXXXXXXXXXXXXXXGETM----QMTTSSDQRC-SMDYYMQKTYYKTASLISN 279
S + M + +++ R S++ KT +L+
Sbjct: 127 DLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRC 186
Query: 280 SCKAIALLAGQTAEVAILAFD-YGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGII 338
+ + AL AG+ + D Y + +GLA+Q+ DD+LD + +LGK SD
Sbjct: 187 AIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKS 246
Query: 339 TAPILFAMEEFPQ-LRTVVEQ 358
T P L +E Q T++++
Sbjct: 247 TYPALLGLEGAQQKAHTLLQE 267
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 142 (55.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 56/189 (29%), Positives = 90/189 (47%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRAC---VALASLK 229
EMIH ASL+ DD+ +DD RRG + + V G K ++LA + L S A +A SL
Sbjct: 109 EMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKT-SILASNALRSLAVKQTLASTSLG 167
Query: 230 NXXXXXXXXXXXXXXXXG-ETMQMTTSSD---QRCSMDY------YMQKTY-YKTASLIS 278
G E + ++D +R S Y++ + +KTA L+
Sbjct: 168 VTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVE 227
Query: 279 NSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGII 338
+ A++ G + E Y + +GL +Q++DDVLD T +S LGK + D+ G +
Sbjct: 228 AAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKL 287
Query: 339 TAPILFAME 347
T P + ++
Sbjct: 288 TYPKVMGVD 296
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 140 (54.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS----- 227
EM+H +SL+ DD+ +D+ RRG + + V G + A+LA L++ A S
Sbjct: 120 EMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESI-AILASQALIALAVQKTTSSTFAD 178
Query: 228 ------LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSC 281
LK + D +++ +KTA+L+ +
Sbjct: 179 VPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAA 238
Query: 282 KAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAP 341
A++ G + E Y + +GL +Q++DDVLD T +S LGK + D+ G +T P
Sbjct: 239 VMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYP 298
Query: 342 ILFAMEE 348
L +E+
Sbjct: 299 RLMGVEK 305
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/228 (26%), Positives = 100/228 (43%)
Query: 97 SILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVE 156
S+L K+L S ++ E + + M GK RP ++ A NV V L
Sbjct: 6 SLLVKQLES-ILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILP---- 60
Query: 157 DALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAG 214
++ E+IHV SL+HDD+ +D+ + RRG S + N+ +A+L G
Sbjct: 61 -------------VSAAVEIIHVYSLIHDDLPGIDNENIRRGQASSHKKF-NEAIAILTG 106
Query: 215 DFLLSRACVALASLKNXXXXXXXXXXXXXXXXGET--MQMTTSSDQRCSMDYY-MQKTYY 271
D LL+ A L+++ G +Q + + D +Q +
Sbjct: 107 DALLTLAFEILSTIDESPFIRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHV 166
Query: 272 -KTASLISNSCKAIALLAGQTAEVAILAF-DYGKNLGLAYQLIDDVLD 317
KTA S +C+ +L G + + + A +YG NLG A+Q+ DD+ D
Sbjct: 167 LKTAQFFSVACELGGIL-GNASNIELNALANYGLNLGHAFQVKDDIAD 213
>UNIPROTKB|P24322 [details] [associations]
symbol:al-3 "Geranylgeranyl pyrophosphate synthase"
species:367110 "Neurospora crassa OR74A" [GO:0004311
"farnesyltranstransferase activity" evidence=ISS] [GO:0006720
"isoprenoid metabolic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 HOGENOM:HOG000169461 KO:K00804
GO:GO:0006720 EMBL:U20940 EMBL:BX294018 EMBL:AABX02000014
EMBL:S74011 PIR:S15662 RefSeq:XP_960695.2 ProteinModelPortal:P24322
SMR:P24322 STRING:P24322 EnsemblFungi:EFNCRT00000004018
GeneID:3876842 KEGG:ncr:NCU01427 OMA:VAYMEST OrthoDB:EOG4QVGMM
Uniprot:P24322
Length = 433
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/222 (22%), Positives = 89/222 (40%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS 227
+ I ++ M+H ASLL DDV D++ RRG + + G + +++ A L
Sbjct: 169 EVITKVISMLHTASLLVDDVEDNSVLRRGFPVAHSIFGIPQ-TINTSNYVYFYALQELQK 227
Query: 228 LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIAL 286
LKN G+ M + C + D Y++ KT L K +
Sbjct: 228 LKNPKAVSIFSEELLNLHRGQGMDLFWRDTLTCPTEDDYLEMVSNKTGGLFRLGIKLMQA 287
Query: 287 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM 346
+ + L +GL +Q+ DD + + KG D+ G + P++ ++
Sbjct: 288 ESRSPVDCVPLV----NIIGLIFQIADDYHNLWNREYTANKGMCEDLTEGKFSFPVIHSI 343
Query: 347 EEFP---QLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTREL 385
P QL +++Q D A+ Y+ + + TR++
Sbjct: 344 RSNPSNMQLLNILKQKTGDEEVKRYAVAYMESTGSFEYTRKV 385
>UNIPROTKB|G4N8D6 [details] [associations]
symbol:MGG_03432 "Geranylgeranyl pyrophosphate synthetase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000092 InterPro:IPR005630 Pfam:PF00348 Pfam:PF03936
PROSITE:PS00723 GO:GO:0000287 GO:GO:0010333 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CM001234
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
RefSeq:XP_003716502.1 ProteinModelPortal:G4N8D6
EnsemblFungi:MGG_03432T0 GeneID:2676530 KEGG:mgr:MGG_03432
Uniprot:G4N8D6
Length = 711
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 59/244 (24%), Positives = 102/244 (41%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS 227
+ I + +H +SL+ DD+ D++ RRG + + V G A+ + +L +A A+ S
Sbjct: 448 ESIKSVINCLHDSSLILDDIEDNSRLRRGFPATHVVYGAGP-AINSATYLYVQAVAAINS 506
Query: 228 LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKA-IA 285
L N G+++ + +++++C + D Y+ KT + IS + IA
Sbjct: 507 LDNREMMDVLLRQLQNLFLGQSLDLHWTANRQCPTRDEYLGMVGQKTGAFISMVAELMIA 566
Query: 286 LLAGQTAEVAILAFDYGKNL-GLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 344
+ E AF +L GL YQ+ DD L+ T + KG D+ + ++
Sbjct: 567 ASNVNSPEKTRAAFAAFSHLSGLYYQVRDDYLNITSAEYADKKGFAEDLDEQKFSYMLVH 626
Query: 345 AMEEFPQLRTVVEQGFED--SSNVDIA--LEYL-GKSRG---IQKTRELXXXXXXXXXXX 396
P + VE F ++A YL G R + TR+L
Sbjct: 627 LARARPDMMVQVEGVFRSMRDGKAEVAESKRYLVGLLRASGTVDATRKLLLGWQDAIVRE 686
Query: 397 IDSL 400
ID+L
Sbjct: 687 IDAL 690
>DICTYBASE|DDB_G0293588 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase 1"
species:44689 "Dictyostelium discoideum" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISS] [GO:0004311
"farnesyltranstransferase activity" evidence=IEA;ISS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0033386
"geranylgeranyl diphosphate biosynthetic process" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 dictyBase:DDB_G0293588 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AAFI02000218 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K00804
OMA:MLAIRLM RefSeq:XP_629028.1 HSSP:O95749
ProteinModelPortal:Q54BK1 SMR:Q54BK1 STRING:Q54BK1
EnsemblProtists:DDB0233098 GeneID:8629314 KEGG:ddi:DDB_G0293588
ProtClustDB:CLSZ2429239 Uniprot:Q54BK1
Length = 303
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 52/216 (24%), Positives = 88/216 (40%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMG--NKVLAVLAGDFLLSRACVAL 225
Q I+++ + +H ASLL DD+ D++ RRG + + G + + FL+ C L
Sbjct: 54 QDISKVIQGLHGASLLIDDIEDNSKLRRGKPVAHSIYGIPQTINSANFVYFLIMDQCNKL 113
Query: 226 ASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 285
K + T++ S YM KT L + +
Sbjct: 114 GDPKATTIFIEELIRLHRGQGYDIFWRDTNTSP--SEQEYMNMVNEKTGGLFRLGLRLLQ 171
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
+ D ++LG+ YQ+ DD+++ K DI G + PI+ A
Sbjct: 172 AFSDNNTNY----IDLVEDLGMYYQIRDDLINLVSVDYQQNKSFCEDISEGKFSFPIIHA 227
Query: 346 MEEFP---QLRTVVEQGFEDSSNVDIALEYLGKSRG 378
+ +L +++Q ED S + ALEY+ KS+G
Sbjct: 228 INADSNDNRLLRILKQKTEDRSVKEHALEYI-KSKG 262
>ZFIN|ZDB-GENE-030131-8742 [details] [associations]
symbol:ggps1 "geranylgeranyl diphosphate synthase
1" species:7955 "Danio rerio" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 ZFIN:ZDB-GENE-030131-8742 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GeneTree:ENSGT00390000010417
EMBL:CU639409 EMBL:CU914439 EMBL:FP017283 IPI:IPI00481673
Ensembl:ENSDART00000097845 ArrayExpress:F1QX12 Bgee:F1QX12
Uniprot:F1QX12
Length = 350
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/222 (22%), Positives = 90/222 (40%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D + RRG + + G + +V+ + +++ +
Sbjct: 89 QVIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYG--IPSVINSANYVYFLGLEKVL 146
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY-YMQKTYYKTASLISNSCKAIA 285
L++ G+ + + C + Y KT L + +
Sbjct: 147 MLEHPEAVRVFTRQLLELHRGQGLDIHWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQ 206
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L D LGL +Q+ DD + S K D+ G + P + A
Sbjct: 207 LFSDWKRDLKPL-LD---TLGLYFQIRDDYANLNSKEYSANKSFCEDLTEGKFSFPTIHA 262
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTRE 384
+ P+ V + + N+DI ++YL K TR+
Sbjct: 263 IWSHPESTQVQNILRQRTENLDIKRYCVDYLEKVGSFAYTRQ 304
>UNIPROTKB|F1NHT9 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IEA]
[GO:0004337 "geranyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004337
GeneTree:ENSGT00390000010417 OMA:MLAIRLM EMBL:AADN02051945
EMBL:AADN02051946 IPI:IPI00589936 Ensembl:ENSGALT00000004102
Uniprot:F1NHT9
Length = 292
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 53/241 (21%), Positives = 92/241 (38%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D++ RRG + + G + +V+ +++ +
Sbjct: 42 QVIIEVTEMLHNASLLVDDIEDNSKLRRGFPVAHSIYG--IPSVINCANYVYFLGLEKVL 99
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDY-YMQKTYYKTASLISNSCKAIA 285
+L + G+ + + C + Y KT L + +
Sbjct: 100 TLDHPDAVKVFTRQLLELHKGQGLDIYWRDTYTCPTEAEYKAMVLQKTGGLFGLAVGLMQ 159
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L LGL +Q+ DD + S K D+ G + P + A
Sbjct: 160 LFSNYKKDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 215
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPE 402
+ P+ V + + N+DI + YL + TR I+SL
Sbjct: 216 IWSKPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRNTLKELESEAYKQIESLGG 275
Query: 403 N 403
N
Sbjct: 276 N 276
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 47/152 (30%), Positives = 70/152 (46%)
Query: 170 IAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS 227
+A EMIH SL+HDD+ LD++D RR + + A+LAGD LL A L S
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQEST-AILAGDALLVLAYQML-S 125
Query: 228 LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 287
G+ + SS + D + K K+ SL + SC ++ L
Sbjct: 126 RYGTPLVQCTSKYVLEMITGQVHDVIGSST--LTADE-INKM--KSGSLFALSCSSVGHL 180
Query: 288 A--GQTAEVAILAFDYGKNLGLAYQLIDDVLD 317
A GQ+ + AF Y +G+ +Q +DD+ D
Sbjct: 181 ANSGQSELTVLEAFGY--EIGIIFQAVDDIKD 210
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 124 (48.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 47/152 (30%), Positives = 70/152 (46%)
Query: 170 IAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS 227
+A EMIH SL+HDD+ LD++D RR + + A+LAGD LL A L S
Sbjct: 68 VAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQEST-AILAGDALLVLAYQML-S 125
Query: 228 LKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALL 287
G+ + SS + D + K K+ SL + SC ++ L
Sbjct: 126 RYGTPLVQCTSKYVLEMITGQVHDVIGSST--LTADE-INKM--KSGSLFALSCSSVGHL 180
Query: 288 A--GQTAEVAILAFDYGKNLGLAYQLIDDVLD 317
A GQ+ + AF Y +G+ +Q +DD+ D
Sbjct: 181 ANSGQSELTVLEAFGY--EIGIIFQAVDDIKD 210
>UNIPROTKB|P56966 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9913 "Bos taurus" [GO:0004311 "farnesyltranstransferase
activity" evidence=IDA] [GO:0006720 "isoprenoid metabolic process"
evidence=IDA] [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] [GO:0004161 "dimethylallyltranstransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
EMBL:BC120313 IPI:IPI00690042 RefSeq:NP_001073269.1
UniGene:Bt.71777 ProteinModelPortal:P56966 SMR:P56966 STRING:P56966
Ensembl:ENSBTAT00000017376 GeneID:780882 KEGG:bta:780882 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 InParanoid:P56966 KO:K00804 OMA:MLAIRLM
OrthoDB:EOG4CG08P NextBio:20924524 GO:GO:0006720 Uniprot:P56966
Length = 300
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 52/237 (21%), Positives = 94/237 (39%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D++ RRG + + G + +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYG--IPSVINSANYVYFLGLEKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + + C + + Y KT L + +
Sbjct: 105 TLNHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L D LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPL-LD---TLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTRELXXXXXXXXXXXIDS 399
+ P+ V + + N+DI + YL + TR ID+
Sbjct: 221 IWSRPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRNTLKELESKAYKQIDA 277
>UNIPROTKB|E2R3P8 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:9453
GeneTree:ENSGT00390000010417 KO:K00804 OMA:LLEPYRY
EMBL:AAEX03002683 RefSeq:XP_003639028.1 RefSeq:XP_536340.2
Ensembl:ENSCAFT00000017968 GeneID:479198 KEGG:cfa:479198
Uniprot:E2R3P8
Length = 300
Score = 124 (48.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 51/237 (21%), Positives = 93/237 (39%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D++ RRG + + G + +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYG--IPSVINSANYVYFLGLQKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + + C + + Y KT L + +
Sbjct: 105 TLDHPDAVKLFTHQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTRELXXXXXXXXXXXIDS 399
+ P+ V + + N+DI + YL + TR ID+
Sbjct: 221 IWSRPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRSTLKELESKAYKQIDA 277
>UNIPROTKB|F1RGX0 [details] [associations]
symbol:GGPS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004337 GeneTree:ENSGT00390000010417 KO:K00804
OMA:LLEPYRY EMBL:CU468332 RefSeq:XP_003483520.1
ProteinModelPortal:F1RGX0 Ensembl:ENSSSCT00000011119
GeneID:100739526 KEGG:ssc:100739526 Uniprot:F1RGX0
Length = 300
Score = 124 (48.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 51/237 (21%), Positives = 93/237 (39%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D++ RRG + + G + +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYG--IPSVINSANYVYFLGLEKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + + C + + Y KT L + +
Sbjct: 105 TLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTRELXXXXXXXXXXXIDS 399
+ P+ V + + N+DI + YL + TR ID+
Sbjct: 221 IWSRPESTQVQNILRQRTENIDIKKYCVHYLENVGSFEYTRNTLKELESKAYKQIDA 277
>UNIPROTKB|O95749 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IEA] [GO:0004337 "geranyltranstransferase activity"
evidence=IEA] [GO:0033384 "geranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate
biosynthetic process" evidence=IEA] [GO:0045337 "farnesyl
diphosphate biosynthetic process" evidence=IEA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005829
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006695 EMBL:AL391994 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB017971 EMBL:AB019036 EMBL:AF125394
EMBL:AB016043 EMBL:AF057698 EMBL:BC005252 EMBL:BC067768
IPI:IPI00032892 RefSeq:NP_001032354.1 UniGene:Hs.730768 PDB:2Q80
PDBsum:2Q80 ProteinModelPortal:O95749 SMR:O95749 STRING:O95749
PhosphoSite:O95749 PaxDb:O95749 PRIDE:O95749 DNASU:9453
Ensembl:ENST00000282841 Ensembl:ENST00000358966
Ensembl:ENST00000476121 Ensembl:ENST00000488594 GeneID:9453
KEGG:hsa:9453 UCSC:uc001hwv.3 GeneCards:GC01P235490 HGNC:HGNC:4249
HPA:HPA029472 MIM:606982 neXtProt:NX_O95749 PharmGKB:PA28661
InParanoid:O95749 OMA:LLEPYRY PhylomeDB:O95749
BioCyc:MetaCyc:HS07859-MONOMER SABIO-RK:O95749 BindingDB:O95749
ChEMBL:CHEMBL4769 ChiTaRS:GGPS1 EvolutionaryTrace:O95749
GenomeRNAi:9453 NextBio:35412 ArrayExpress:O95749 Bgee:O95749
CleanEx:HS_GGPS1 Genevestigator:O95749 GermOnline:ENSG00000152904
Uniprot:O95749
Length = 300
Score = 123 (48.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 51/237 (21%), Positives = 93/237 (39%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D++ RRG + + G + +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYG--IPSVINSANYVYFLGLEKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + + C + + Y KT L + +
Sbjct: 105 TLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTRELXXXXXXXXXXXIDS 399
+ P+ V + + N+DI + YL + TR ID+
Sbjct: 221 IWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDA 277
>RGD|1359680 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10116 "Rattus norvegicus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO;ISS] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO;ISS] [GO:0008152 "metabolic process"
evidence=ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0033384 "geranyl diphosphate biosynthetic process"
evidence=IEA] [GO:0033386 "geranylgeranyl diphosphate biosynthetic
process" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 RGD:1359680 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 CTD:9453
GeneTree:ENSGT00390000010417 HOGENOM:HOG000169461
HOVERGEN:HBG051729 KO:K00804 OMA:MLAIRLM OrthoDB:EOG4CG08P
GO:GO:0006720 EMBL:AB118237 EMBL:AB118238 EMBL:AB118239
EMBL:AB118240 EMBL:BC090327 IPI:IPI00363014 RefSeq:NP_001007627.1
UniGene:Rn.54975 ProteinModelPortal:Q6F596 SMR:Q6F596 STRING:Q6F596
Ensembl:ENSRNOT00000022483 GeneID:291211 KEGG:rno:291211
UCSC:RGD:1359680 InParanoid:Q6F596 NextBio:632273
ArrayExpress:Q6F596 Genevestigator:Q6F596
GermOnline:ENSRNOG00000016767 Uniprot:Q6F596
Length = 300
Score = 122 (48.0 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 51/221 (23%), Positives = 90/221 (40%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D + RRG + + G V +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYG--VPSVINSANYVYFLGLEKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + C + + Y KT L + +
Sbjct: 105 TLDHPDAVKLFTRQLLELHQGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L D LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPL-LD---TLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYLGKSRGIQKTR 383
+ P+ V + + N+DI ++YL + TR
Sbjct: 221 IWSRPESTQVQNILRQRTENIDIKKYCVQYLEDVGSFEYTR 261
>UNIPROTKB|Q97W92 [details] [associations]
symbol:gdS-2 "Hexaprenyl pyrophosphate synthase"
species:273057 "Sulfolobus solfataricus P2" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IDA] [GO:0052922 "hexaprenyl
diphosphate synthase (geranylgeranyl-diphosphate specific)
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 EMBL:AE006641
GenomeReviews:AE006641_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 PIR:A99405 RefSeq:NP_343706.1
PDB:2AZJ PDB:2AZK PDBsum:2AZJ PDBsum:2AZK ProteinModelPortal:Q97W92
SMR:Q97W92 GeneID:1453823 KEGG:sso:SSO2345 HOGENOM:HOG000232204
OMA:KDTAVGA ProtClustDB:CLSK803315 BioCyc:MetaCyc:MONOMER-15679
EvolutionaryTrace:Q97W92 GO:GO:0052922 Uniprot:Q97W92
Length = 281
Score = 113 (44.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 39/144 (27%), Positives = 62/144 (43%)
Query: 175 EMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXXXX 234
E++H ASL DD++D TRRG + V GN+ + + ++L+ A + +
Sbjct: 71 EILHSASLALDDIVDLDATRRGDKAAWVVYGNRKVIFIT-NYLIPTALRIIQTSYGDDAL 129
Query: 235 XXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEV 294
G M +SD Y++ KT SL S ++ A +
Sbjct: 130 NTSIELWKDTSVGALRDMYDNSD-------YIRTIELKTGSLFKLST-VLSAYASKHYNT 181
Query: 295 AILAFDYGKNLGLAYQLIDDVLDF 318
D GK LG+ YQ+IDD +D+
Sbjct: 182 KQQMLDVGKYLGIIYQVIDDFVDY 205
Score = 47 (21.6 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 114 LASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATE-LRTRQQCIAE 172
L + Y K +GKRFR T+ + AL + D ALA E L + + +
Sbjct: 30 LVDISSYILK---DGKRFRGTLNMFFTVALG----GDIKDSYGGALAIEILHSASLALDD 82
Query: 173 ITEM 176
I ++
Sbjct: 83 IVDL 86
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 42/151 (27%), Positives = 68/151 (45%)
Query: 175 EMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNXX 232
EM+H ASL+HDD+ +DD RRG S + V G+ +A+LAGD L A + S
Sbjct: 117 EMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSG-MAILAGDALFPLAFQHIVSHTPPD 175
Query: 233 XXXXXXXXXXXXXXGETMQMT-TSSDQRCSMD---YYMQKTYYKTASLISNSCKAIA--L 286
T+ T ++ Q ++ + + K + C A+ L
Sbjct: 176 LVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGE-CSAVCGGL 234
Query: 287 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLD 317
L G T + YG+ +G+ YQ++DD+ +
Sbjct: 235 LGGATEDELQSLRRYGRAVGMLYQVVDDITE 265
>MGI|MGI:1341724 [details] [associations]
symbol:Ggps1 "geranylgeranyl diphosphate synthase 1"
species:10090 "Mus musculus" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IEA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISO] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006720 "isoprenoid metabolic
process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 MGI:MGI:1341724
GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 CTD:9453 GeneTree:ENSGT00390000010417
HOGENOM:HOG000169461 HOVERGEN:HBG051729 KO:K00804 OrthoDB:EOG4CG08P
GO:GO:0006720 OMA:LLEPYRY EMBL:AB016044 EMBL:BC069913
IPI:IPI00123594 RefSeq:NP_034412.1 UniGene:Mm.148039
ProteinModelPortal:Q9WTN0 SMR:Q9WTN0 STRING:Q9WTN0
PhosphoSite:Q9WTN0 PaxDb:Q9WTN0 PRIDE:Q9WTN0
Ensembl:ENSMUST00000170957 GeneID:14593 KEGG:mmu:14593
InParanoid:Q9WTN0 NextBio:286348 Bgee:Q9WTN0 CleanEx:MM_GGPS1
Genevestigator:Q9WTN0 GermOnline:ENSMUSG00000021302 Uniprot:Q9WTN0
Length = 300
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 49/211 (23%), Positives = 87/211 (41%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D + RRG + + G V +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDSSKLRRGFPVAHSIYG--VPSVINSANYVYFLGLEKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + C + + Y KT L + +
Sbjct: 105 TLDHPDAVKLFTRQLLELHQGQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L D LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPL-LD---TLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQLRTVVEQGFEDSSNVDI---ALEYL 373
+ P+ V + + N+DI ++YL
Sbjct: 221 IWSRPESTQVQNILRQRTENIDIKKYCVQYL 251
>ASPGD|ASPL0000044272 [details] [associations]
symbol:AN1592 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0019748 "secondary
metabolic process" evidence=IEP;IGC] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001307
EMBL:AACD01000025 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000169461 OrthoDB:EOG4QVGMM
RefSeq:XP_659196.1 ProteinModelPortal:Q5BCY8
EnsemblFungi:CADANIAT00008225 GeneID:2875291 KEGG:ani:AN1592.2
OMA:CAAIANE Uniprot:Q5BCY8
Length = 397
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 50/191 (26%), Positives = 80/191 (41%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS 227
Q IA M H ASLL DD+ D + RRG+ + V G + + +++ A L
Sbjct: 142 QAIATTVGMAHNASLLIDDIQDSSKLRRGVPCAHEVFGI-AQTINSANYVYFLAQNQLFR 200
Query: 228 LKNX-XXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
L++ G+ M++ + SMD Y+Q KT L + +
Sbjct: 201 LRSWPQAISVFNEEMVNLHRGQGMELFWRDNLLPPSMDDYLQMIANKTGGLFRMIVRLLQ 260
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
+ Q +V L D LGL +Q++DD + + KG D+ G + PI A
Sbjct: 261 TSSRQVIDVEQLV-DV---LGLYFQILDDYKNIREEKMAAQKGFFEDLTEGKFSFPICHA 316
Query: 346 MEEFPQLRTVV 356
+ E + RT +
Sbjct: 317 IGEGAKNRTAL 327
>UNIPROTKB|C9J7M1 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00945938
ProteinModelPortal:C9J7M1 SMR:C9J7M1 STRING:C9J7M1
Ensembl:ENST00000471812 ArrayExpress:C9J7M1 Bgee:C9J7M1
Uniprot:C9J7M1
Length = 242
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 44/202 (21%), Positives = 83/202 (41%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D++ RRG + + G + +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYG--IPSVINSANYVYFLGLEKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + + C + + Y KT L + +
Sbjct: 105 TLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQLRTVVEQGFEDSSNVD 367
+ P+ V + + N+D
Sbjct: 221 IWSRPESTQVQNILRQRTENID 242
>POMBASE|SPAC19G12.12 [details] [associations]
symbol:dlp1 "decaprenyl diphosphate synthase subunit 2
Dlp1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0070219 "cellular
sulfide ion homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IDA]
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
PomBase:SPAC19G12.12 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 GO:GO:0016209 GO:GO:0019646 GO:GO:0070219
GO:GO:0006119 GO:GO:0019418 GO:GO:0006744 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AB118853
PIR:T37999 RefSeq:NP_594427.1 ProteinModelPortal:O13851
EnsemblFungi:SPAC19G12.12.1 GeneID:2542608 KEGG:spo:SPAC19G12.12
OrthoDB:EOG4D82GS NextBio:20803657 GO:GO:0032476 Uniprot:O13851
Length = 294
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 40/156 (25%), Positives = 71/156 (45%)
Query: 157 DALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDF 216
D + +L R + +A +TE+IH A+++H ++ ++ + LA L GD+
Sbjct: 104 DPPSQQLFQRYKQLARVTELIHAANIIHINIGEEQSNEQ-----------IKLATLVGDY 152
Query: 217 LLSRACVALASLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRCSMDYYMQKTYY-KTAS 275
LL +A V LA L+N G S Q S+ ++T ++A
Sbjct: 153 LLGKASVDLAHLENNAITEIMASVIANLVEGHF-----GSRQNGSVGLSNERTILLQSAF 207
Query: 276 LISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQL 311
+ + +C ++L + + F+YGK LGL+ QL
Sbjct: 208 MPAKACLCASILNNSSQYINDACFNYGKFLGLSLQL 243
>FB|FBgn0019662 [details] [associations]
symbol:qm "quemao" species:7227 "Drosophila melanogaster"
[GO:0004337 "geranyltranstransferase activity" evidence=ISS]
[GO:0004161 "dimethylallyltranstransferase activity" evidence=ISS]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS;NAS]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035050
"embryonic heart tube development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0022008 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0035050 GO:GO:0008354
ChiTaRS:RPL10 FlyBase:FBgn0019662 EMBL:AF049659
ProteinModelPortal:O61539 SMR:O61539 STRING:O61539 PRIDE:O61539
InParanoid:O61539 ArrayExpress:O61539 Bgee:O61539 Uniprot:O61539
Length = 338
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 50/238 (21%), Positives = 92/238 (38%)
Query: 170 IAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLK 229
I +I +M+H +SLL DD+ D++ RRG+ + + G + A ++ L A + L
Sbjct: 61 IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYG-VASTINAANYALFLALEKVQQLD 119
Query: 230 NXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIALLA 288
+ G+ M++ C S Y T KT L + + + L +
Sbjct: 120 HPEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFS 179
Query: 289 GQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM-- 346
+ + L LGL +Q+ DD + + + K D+ G P++ A+
Sbjct: 180 SNKEDYSKLT----AILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVRT 235
Query: 347 -EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELXXXXXXXXXXXIDSLPEN 403
++ Q+ ++ Q D + L K Q TR++ + L N
Sbjct: 236 QKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLESLDAEARSEVARLGSN 293
>UNIPROTKB|C9J6G3 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0004337 "geranyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AL391994 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004337
HOGENOM:HOG000169461 HGNC:HGNC:4249 ChiTaRS:GGPS1 IPI:IPI00946064
ProteinModelPortal:C9J6G3 SMR:C9J6G3 STRING:C9J6G3
Ensembl:ENST00000497327 ArrayExpress:C9J6G3 Bgee:C9J6G3
Uniprot:C9J6G3
Length = 230
Score = 112 (44.5 bits), Expect = 0.00054, P = 0.00054
Identities = 41/186 (22%), Positives = 77/186 (41%)
Query: 168 QCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVL-AGDFLLSRACVALA 226
Q I E+TEM+H ASLL DD+ D++ RRG + + G + +V+ + +++ +
Sbjct: 47 QIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYG--IPSVINSANYVYFLGLEKVL 104
Query: 227 SLKNXXXXXXXXXXXXXXXXGETMQMTTSSDQRC-SMDYYMQKTYYKTASLISNSCKAIA 285
+L + G+ + + + C + + Y KT L + +
Sbjct: 105 TLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQ 164
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
L + ++ L LGL +Q+ DD + S K D+ G + P + A
Sbjct: 165 LFSDYKEDLKPLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHA 220
Query: 346 MEEFPQ 351
+ P+
Sbjct: 221 IWSRPE 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 427 385 0.00092 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 110
No. of states in DFA: 602 (64 KB)
Total size of DFA: 218 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.07u 0.11s 27.18t Elapsed: 00:00:02
Total cpu time: 27.08u 0.11s 27.19t Elapsed: 00:00:02
Start: Fri May 10 11:34:21 2013 End: Fri May 10 11:34:23 2013
WARNINGS ISSUED: 1