BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014276
(427 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5HZ00|SPS3_ARATH Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=SPS3 PE=1 SV=1
Length = 422
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 306/432 (70%), Positives = 356/432 (82%), Gaps = 15/432 (3%)
Query: 1 MLIYRGLSRIS-RISKKTSF--GRRWLPSH--PLLSGASHSAAAAAADSSVKVLGCREAY 55
ML R ++RIS + + SF + L SH ++ HS + DS K CR Y
Sbjct: 1 MLFTRSVARISSKFLRNRSFYGSSQSLASHRFAIIPDQGHSCS----DSPHKGYVCRTTY 56
Query: 56 SWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLA 115
S P G HQ++HQSSS++E E+LDPFSLVADELS+L+ +LR MV+AEVPKLA
Sbjct: 57 SLKSPVFGGFSHQLYHQSSSLVE-----EELDPFSLVADELSLLSNKLREMVLAEVPKLA 111
Query: 116 SAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITE 175
SAAEYFFK GV+GK+FR T+LLLMATALNVRVPE L D + +ELR RQ+ IAEITE
Sbjct: 112 SAAEYFFKRGVQGKQFRSTILLLMATALNVRVPEALIGESTDIVTSELRVRQRGIAEITE 171
Query: 176 MIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVT 235
MIHVASLLHDDVLDDADTRRG+GSLN VMGNK ++VLAGDFLLSRAC ALA+LKNTEVV
Sbjct: 172 MIHVASLLHDDVLDDADTRRGVGSLNVVMGNK-MSVLAGDFLLSRACGALAALKNTEVVA 230
Query: 236 LLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVA 295
LLAT VEHLVTGETM++T+S++QR SMDYYMQKTYYKTASLISNSCKA+A+L GQTAEVA
Sbjct: 231 LLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVA 290
Query: 296 ILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTV 355
+LAF+YG+NLGLA+QLIDD+LDFTGTSASLGKGSLSDIRHG+ITAPILFAMEEFPQLR V
Sbjct: 291 VLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQLREV 350
Query: 356 VEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRAL 415
V+Q +D NVDIALEYLGKS+GIQ+ RELA++HANLAAAAI SLPE ++EDV +SRRAL
Sbjct: 351 VDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRAL 410
Query: 416 LDLTHRVITRNK 427
+DLTHRVITRNK
Sbjct: 411 IDLTHRVITRNK 422
>sp|Q653T6|SPS1_ORYSJ Solanesyl-diphosphate synthase 1, mitochondrial OS=Oryza sativa
subsp. japonica GN=SPS1 PE=1 SV=1
Length = 430
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/381 (71%), Positives = 323/381 (84%), Gaps = 6/381 (1%)
Query: 47 KVLGCREAYSWSLPALHGIRHQIHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSM 106
KV+GCR A S LH ++Q+ S S+EQ DPF LVADELS+LA RLRSM
Sbjct: 56 KVVGCRGATFVSSRWLHDAQYQVRQDGLS-----RSEEQQDPFELVADELSLLANRLRSM 110
Query: 107 VVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTR 166
V AEVPKLASAAEYFFK+G EGKRFRPTVLLLMA+AL + + GV LA +LRTR
Sbjct: 111 VAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDSTEVGVLTILANKLRTR 170
Query: 167 QQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALA 226
QQ IAEITEMIHVASLLHDDVLDDADTRRG+ SLN +MGNK L+VLAGDFLLSRACVALA
Sbjct: 171 QQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNK-LSVLAGDFLLSRACVALA 229
Query: 227 SLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 286
+L NTEVV+L+AT VEHLVTGETMQ++TS +QR SMDYY+QKTYYKTASLISNSCKA+A+
Sbjct: 230 ALGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAVAI 289
Query: 287 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM 346
LAG TA+V++LA++YG+NLGLA+QLIDDVLDFTGTSASLGKGSL+DIRHGIITAP+L+AM
Sbjct: 290 LAGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLYAM 349
Query: 347 EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDE 406
EEFPQL VV++GF++ +NV++AL+YL KSRGI+KT+ELA +HAN A AI++LP+++DE
Sbjct: 350 EEFPQLHEVVDRGFDNPANVELALDYLQKSRGIEKTKELAREHANRAIKAIEALPDSDDE 409
Query: 407 DVTKSRRALLDLTHRVITRNK 427
DV SRRAL+D+T RVITR K
Sbjct: 410 DVLTSRRALIDITERVITRTK 430
>sp|Q7S565|COQ1_NEUCR Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU02305 PE=3 SV=1
Length = 449
Score = 265 bits (677), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/395 (40%), Positives = 232/395 (58%), Gaps = 45/395 (11%)
Query: 69 IHHQSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEG 128
+++ + I+ TD +DP LVA E+ L +R ++ + P L AA+Y+ + EG
Sbjct: 64 VNNAVTKAIKGTDGLPTIDPLRLVAGEMKFLTGNIRKLLGSGHPSLDRAAKYYTQ--AEG 121
Query: 129 KRFRPTVLLLM--ATALNVRVPEPLHDGVEDALA-------------------------- 160
K RP ++LLM ATAL + P+ ++ + A
Sbjct: 122 KHVRPLIVLLMSRATALCPKAPQRQQSTLQASAAIDTSISPLNILSDFNPSDATPVSIPA 181
Query: 161 -TELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLS 219
T++ Q+ +AEITE+IH ASLLHDDV+D +++RRG S N GNK +AVLAGDFLL
Sbjct: 182 DTDILPSQRRLAEITELIHTASLLHDDVIDHSESRRGAPSANLEFGNK-MAVLAGDFLLG 240
Query: 220 RACVALASLKNTEVVTLLATVVEHLVTGETMQM-TTSSDQRC------SMDYYMQKTYYK 272
RA VALA L++ EVV LLATV+ +LV GE MQ+ T+ D++ ++ YY+QKTY K
Sbjct: 241 RASVALARLRHAEVVELLATVIANLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLK 300
Query: 273 TASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSD 332
TASLIS SC+A ALL G A A+ YGKNLGLA+QL+DD+LD+T + LGK + +D
Sbjct: 301 TASLISKSCRASALLGGADAATVDAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGAD 360
Query: 333 IRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANL 392
+ G+ TAP+LFA + P+L +V + FE + A E + +S GI++TR LA +A
Sbjct: 361 LELGLATAPLLFAWKTMPELGPLVGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEK 420
Query: 393 AAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
A AI P++ +D L+++ + + RNK
Sbjct: 421 AIEAISGFPDSEAKD------GLIEMAVKTLKRNK 449
>sp|Q33DR2|DPS1_MOUSE Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1
PE=1 SV=1
Length = 409
Score = 258 bits (660), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 229/371 (61%), Gaps = 23/371 (6%)
Query: 60 PALHGIRHQIHHQSSSVI--EDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLAS 116
P +H I Q H ++ ++ T S E+ DPF L +L L + +R + +L
Sbjct: 59 PTMHSI-SQFHQRTPAMCSCRQTQSGEKYSDPFKLGWRDLKGLYEDIRKELHISTRELKD 117
Query: 117 AAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEM 176
+EY+F +GK FRP +++LMA A N+ H+ A E++ Q+ IA + EM
Sbjct: 118 MSEYYFDG--KGKAFRPIIVVLMARACNIH-----HNN-----AREMQASQRSIALVAEM 165
Query: 177 IHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTL 236
IH A+L+HDDV+DDA +RRG ++N + G K AVLAGD +LS A VALA + NT VV++
Sbjct: 166 IHTATLVHDDVIDDASSRRGKHTVNKIWGEKK-AVLAGDLILSAASVALARIGNTAVVSM 224
Query: 237 LATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAI 296
LA V+E LV GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V
Sbjct: 225 LAQVIEDLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHE 284
Query: 297 LAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVV 356
+A+ YGKN+G+A+QLIDDVLDFT S +GK + +D++ GI T P+LFA ++FP++ ++
Sbjct: 285 IAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMI 344
Query: 357 EQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALL 416
+ F +VD A +Y+ +S G+Q+T LA ++ + A I L + + D AL+
Sbjct: 345 MRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTERD------ALI 398
Query: 417 DLTHRVITRNK 427
L+ V+TR+K
Sbjct: 399 QLSESVLTRDK 409
>sp|Q6CBH3|COQ1_YARLI Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COQ1
PE=3 SV=1
Length = 452
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 243/410 (59%), Gaps = 66/410 (16%)
Query: 72 QSSSVIEDTDSQEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
Q+S ++E TD+ + DPFS+V+ E+S LA + S++ + P L A Y+F+ EGK
Sbjct: 55 QASRLVE-TDTPIR-DPFSIVSQEMSTLANNIGSLIGSGHPTLNKVATYYFQS--EGKHV 110
Query: 132 RPTVLLLMATAL--------------------NVRV--PEP-----------LHDGVE-- 156
RP ++LL++ AL NV PEP LH G+
Sbjct: 111 RPLIVLLLSRALSAIPESERDRGTFDASDVTENVGELNPEPSINDPLSPIEILH-GINPD 169
Query: 157 ----------DALATE---LRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFV 203
D L E + +Q+ +AEI EMIH ASLLHDDV+D++ TRRG + N
Sbjct: 170 IVLNPLSRPSDPLPYESNGILPKQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPTGNVA 229
Query: 204 MGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQM------TTSSD 257
GNK +A+LAGDFLL RA VA+A L+N EV+ LL+T + +LV GE MQ+ +
Sbjct: 230 FGNK-MAILAGDFLLGRASVAIARLRNAEVIELLSTTIANLVEGEFMQLKNTIVDNSEIA 288
Query: 258 QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLD 317
+ + +YY+ KTY KTASL+S SC+A A+L+G + ++ +GKNLGL +Q++DD+LD
Sbjct: 289 NKATFEYYIHKTYLKTASLMSKSCRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLD 348
Query: 318 FTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSR 377
++ + LGK + +D++ G+ TAP+LFA E++P+L ++++ F+ +V+ A + ++
Sbjct: 349 YSEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQAD 408
Query: 378 GIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
G+ +TRELA K+ + A A +D LP ++SR AL +LT +++ R+K
Sbjct: 409 GLSRTRELAQKYCDEAVANLDLLP------YSESREALRNLTMKMMNRSK 452
>sp|Q54VJ9|DPS1_DICDI Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1
PE=3 SV=1
Length = 456
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 207/316 (65%), Gaps = 27/316 (8%)
Query: 112 PKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIA 171
P L+S + Y+F++ +GKR RPT++LL++ AL++ + Q +A
Sbjct: 168 PILSSISSYYFEL--KGKRIRPTIVLLLS----------------KALSSTVHGSQLKLA 209
Query: 172 EITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNT 231
EI EMIH ASL+HDDV+D+A TRR + S+N NK LA+L GD+LL+RA V L++++N
Sbjct: 210 EIVEMIHTASLVHDDVIDEASTRRDVISINHSYTNK-LAILCGDYLLARASVVLSTIRNP 268
Query: 232 EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT 291
+V ++T + LV GE MQ S+ S D Y+QKTY KT SLI+NSC++ A+L+G
Sbjct: 269 DVTECMSTALAELVEGEFMQ--AKSNGVVSFDNYLQKTYLKTGSLITNSCRSAAILSGAD 326
Query: 292 AEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQ 351
+ + ++ ++GKNLGLA+Q++DD+LD+TG++ GK + D+ G+ TAP+L+A +EFPQ
Sbjct: 327 SNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYATQEFPQ 386
Query: 352 LRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKS 411
L ++++ F + +V+ A + S+GI+KTR LA+++ N A ++ LP+ ++S
Sbjct: 387 LEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQ------SES 440
Query: 412 RRALLDLTHRVITRNK 427
R L+ L+H V+TR K
Sbjct: 441 RDLLITLSHIVVTRTK 456
>sp|Q5T2R2|DPS1_HUMAN Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1
PE=1 SV=1
Length = 415
Score = 248 bits (632), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 219/361 (60%), Gaps = 22/361 (6%)
Query: 68 QIHHQSSSVIEDTDSQEQL-DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGV 126
+ HH + T S E+ DPF L +L L + +R ++ +L +EY+F
Sbjct: 76 RFHHTTPD--SKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLISTSELKEMSEYYFDG-- 131
Query: 127 EGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDD 186
+GK FRP ++ LMA A N+ H ++ Q+ IA I EMIH ASL+HDD
Sbjct: 132 KGKAFRPIIVALMARACNIHHNNSRH----------VQASQRAIALIAEMIHTASLVHDD 181
Query: 187 VLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVT 246
V+DDA +RRG ++N + G K AVLAGD +LS A +ALA + NT V+++L V+E LV
Sbjct: 182 VIDDASSRRGKHTVNKIWGEKK-AVLAGDLILSAASIALARIGNTTVISILTQVIEDLVR 240
Query: 247 GETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLG 306
GE +Q+ + ++ +Y++KT+ KTASLI+NSCKA+++L V +A+ YGKN+G
Sbjct: 241 GEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVG 300
Query: 307 LAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNV 366
+A+QLIDDVLDFT S +GK + +D++ G+ T P+LFA ++FP++ ++ + F +V
Sbjct: 301 IAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDV 360
Query: 367 DIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
D A +Y+ +S G+Q+T LA ++ + A I L + + D AL+ L+ V+TR+
Sbjct: 361 DRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPERD------ALIQLSEIVLTRD 414
Query: 427 K 427
K
Sbjct: 415 K 415
>sp|P72580|PREA_SYNY3 Prenyl transferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=preA PE=3 SV=2
Length = 323
Score = 241 bits (616), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 208/337 (61%), Gaps = 23/337 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F+ V +L +L L+ +V A P L +AAE+ F+ G GKR RP ++LL++ A
Sbjct: 8 FAPVDQDLRLLTDNLKRLVGARHPILGAAAEHLFEAG--GKRVRPAIVLLVSRA------ 59
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
L EL R + +AEITEMIH ASL+HDDV+D+AD RR + ++N + N+V
Sbjct: 60 --------TLLDQELTARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNRV 111
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQK 268
AVLAGDFL +++ LA+L N EVV LL+ V+ GE +Q D ++ Y++K
Sbjct: 112 -AVLAGDFLFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEK 170
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
+Y+KTASLI+NS KA +L+ +V ++YGK+LGLA+Q++DD+LDFT + LGK
Sbjct: 171 SYFKTASLIANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKP 230
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVK 388
+ SD+ G ITAP LFAME++P L ++E+ F + +++ ALE + + GI+++RELA
Sbjct: 231 AGSDLISGNITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAAN 290
Query: 389 HANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 425
A LA + L +++ R +LL+L V+ R
Sbjct: 291 QAQLARQHLSVL------EMSAPRESLLELVDYVLGR 321
>sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment)
OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1
Length = 372
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 202/313 (64%), Gaps = 14/313 (4%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
+VAD+L L L+S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 54 LEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAG--GKRLRPALVFLVSRAT----- 106
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
E A EL T Q +AEI EMIH ASL+HDDV+DD+ RRG +++ + G +V
Sbjct: 107 ------AELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRV 160
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQK 268
AVLAGDF+ +++ LA+L+N EV+ L++ V++ +GE Q +T D ++D Y+ K
Sbjct: 161 -AVLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLK 219
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
+YYKTASLI+ S ++ A+ +G + + ++YG+NLGL++Q++DD+LDFT ++ LGK
Sbjct: 220 SYYKTASLIAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKP 279
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVK 388
+ SD+ G +TAP++FA+++ PQLR +++ F +++++ A+E + +S GI++ ELA +
Sbjct: 280 AGSDLAKGNLTAPVIFALQDEPQLREIIDSEFSETNSLATAIELVHRSGGIKRAHELARE 339
Query: 389 HANLAAAAIDSLP 401
+A ++ LP
Sbjct: 340 KGEIAIQSLQCLP 352
>sp|Q75HZ9|SPS2_ORYSJ Solanesyl-diphosphate synthase 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=SPS2 PE=1 SV=2
Length = 403
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 205/314 (65%), Gaps = 14/314 (4%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
+V+D+L L L+S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 87 VVSDDLLKLNNNLKSLVGAENPVLVSAAEQIFGAG--GKRLRPALVFLVSRAT------- 137
Query: 151 LHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLA 210
E A EL T Q +AEI EMIH ASL+HDDV+DD+ RRG +++ + G +V A
Sbjct: 138 ----AELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRV-A 192
Query: 211 VLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTY 270
VLAGDF+ +++ LA+L+N EV+ L++ V++ +GE Q +T D ++D Y+ K+Y
Sbjct: 193 VLAGDFMFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDVTLDDYLLKSY 252
Query: 271 YKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSL 330
YKTASL+++S ++ A+ +G + + ++YG+NLGL++Q++DD+LDFT ++ LGK +
Sbjct: 253 YKTASLLASSTRSAAIFSGVSTTICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAG 312
Query: 331 SDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHA 390
SD+ G +TAP++FA+++ P+LR +++ F +S ++ A++ + +S GI++ +ELA +
Sbjct: 313 SDLAKGNLTAPVIFALQDEPKLREIIDSEFSESDSLATAIDLVHRSGGIRRAQELAKEKG 372
Query: 391 NLAAAAIDSLPENN 404
+LA + LP++
Sbjct: 373 DLALQNLQCLPKSQ 386
>sp|Q76FS5|SPS2_ARATH Solanesyl diphosphate synthase 2, chloroplastic OS=Arabidopsis
thaliana GN=SPS2 PE=1 SV=1
Length = 417
Score = 232 bits (591), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 197/313 (62%), Gaps = 14/313 (4%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F +VAD+L L L S+V AE P L SAAE F G GKR RP ++ L++ A
Sbjct: 99 FEVVADDLQRLNDNLLSIVGAENPVLISAAEQIFSAG--GKRMRPGLVFLVSRAT----- 151
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
E A EL + + EI EMIH ASL+HDDVLD++D RRG +++ + G +V
Sbjct: 152 ------AELAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMRRGRETVHELFGTRV 205
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQK 268
AVLAGDF+ ++A LA+L+N EV+ L++ V++ +GE Q ++ D +D YM K
Sbjct: 206 -AVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLK 264
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
+YYKTASL++ S K A+ + ++VA + +GKNLGL++Q++DD+LDFT ++ LGK
Sbjct: 265 SYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKP 324
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVK 388
+ +D+ G ITAP++FA+E P+LR ++E F + +++ A+E + GI+K +ELA +
Sbjct: 325 AANDLAKGNITAPVIFALENEPRLREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELAKE 384
Query: 389 HANLAAAAIDSLP 401
A LA ++ LP
Sbjct: 385 KAELALKNLNCLP 397
>sp|Q8S948|SPS1_ARATH Solanesyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1
PE=1 SV=1
Length = 406
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 225/390 (57%), Gaps = 31/390 (7%)
Query: 20 GRRWLPS--HPLLSGASHSAAAAAADSSVKVLGCREAYSWSLPALHGIRHQIHHQSSSVI 77
GRR PS + S + + S K + + S + L+GI QS +V
Sbjct: 20 GRRQFPSLAKTVCKFTSSNRSYGGLVGSCKAVPTK---SKEISLLNGI-----GQSQTVS 71
Query: 78 EDTDSQEQLDP------FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRF 131
D QE P F LVA +L L L S+V AE P L SAAE F G GKR
Sbjct: 72 FDL-KQESKQPISLVTLFELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAG--GKRM 128
Query: 132 RPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDA 191
RP ++ L++ H E A EL T + +AEI EMIH ASL+HDDVLD++
Sbjct: 129 RPGLVFLVS-----------HATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDVLDES 177
Query: 192 DTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQ 251
D RRG +++ + G +V AVLAGDF+ ++A LA+L+N EV+ L++ V++ +GE Q
Sbjct: 178 DMRRGKETVHELFGTRV-AVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQ 236
Query: 252 MTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQL 311
++ D +D Y+ K++YKTASL++ S K A+ + +V +++GKNLGL++Q+
Sbjct: 237 ASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQI 296
Query: 312 IDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALE 371
+DD+LDFT ++ LGK + SD+ G +TAP++FA+E P+LR ++E F ++ +++ A+E
Sbjct: 297 VDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLREIIESEFCEAGSLEEAIE 356
Query: 372 YLGKSRGIQKTRELAVKHANLAAAAIDSLP 401
+ K GI++ +ELA + A+ A + LP
Sbjct: 357 AVTKGGGIKRAQELAREKADDAIKNLQCLP 386
>sp|Q9TLS1|PREA_CYACA Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1
Length = 323
Score = 216 bits (549), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 208/336 (61%), Gaps = 23/336 (6%)
Query: 92 VADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPL 151
V ++L + + L ++ P L++AA++ + VE K+ RP ++LL+A A++
Sbjct: 11 VKEDLLNIEQTLNKLIKVNNPILSAAAKHL--LIVESKKIRPAIVLLVAKAIDKN----- 63
Query: 152 HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAV 211
+++T QQ +AE+TE+IH A+LLHDDV+D++ RRG S+N GNK+ AV
Sbjct: 64 ---------KKIKTSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKI-AV 113
Query: 212 LAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYY 271
AGDFL +++ LA++ N EVV ++ V+ L GE Q T + S+ Y++K++
Sbjct: 114 FAGDFLFAQSSWYLANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFN 173
Query: 272 KTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLS 331
KTASLI+ SCK+ LL+ + ++YGKNLGLA+Q+IDD+LD T +S +LGK + S
Sbjct: 174 KTASLIAASCKSCCLLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTS 233
Query: 332 DIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHAN 391
D++ G +TAP+LFA+ + +L ++E+ F + S++ A+ + ++ I+++ +LA +H
Sbjct: 234 DLKLGNLTAPVLFALTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIE 293
Query: 392 LAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
A +I LP ++++D +L+++ + ++ R K
Sbjct: 294 AAINSIKDLPTSSEKD------SLIEIAYDLLNRYK 323
>sp|O43091|DPS1_SCHPO Decaprenyl-diphosphate synthase subunit 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dps1 PE=1 SV=1
Length = 378
Score = 215 bits (547), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/352 (36%), Positives = 210/352 (59%), Gaps = 24/352 (6%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLM--ATALNVRVP 148
L+ +EL ++ +R M+ + L ++Y+ +GK+ RP+++LLM AT+L +
Sbjct: 36 LIKNELEQISPGIRQMLNSNSEFLEECSKYY--TIAQGKQMRPSLVLLMSKATSLCHGID 93
Query: 149 EPL-------HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLN 201
+ D + ++ Q +A+ITEMIH+ASLLHDDV+D A+ RRG S N
Sbjct: 94 RSVVGDKYIDDDDLRSFSTGQILPSQLRLAQITEMIHIASLLHDDVIDHANVRRGSPSSN 153
Query: 202 FVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSD---- 257
GN+ ++LAG+F+L+RA A+A L+N +V LLATV+ LV GE +Q+ + D
Sbjct: 154 VAFGNR-RSILAGNFILARASTAMARLRNPQVTELLATVIADLVRGEFLQLKNTMDPSSL 212
Query: 258 --QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDV 315
++ + DYY++K++ KTASLIS SCKA +L + VA A +YG+ +G A+QL+DDV
Sbjct: 213 EIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDV 272
Query: 316 LDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGK 375
LD+T +LGK + +D++ G+ TAP+LFA +++P+L ++ F S++ A +
Sbjct: 273 LDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVNRFNHPSDIQRARSLVEC 332
Query: 376 SRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
+ I++T A ++ A ++ LP+ + +R+AL L +VITR K
Sbjct: 333 TDAIEQTITWAKEYIKKAKDSLLCLPD------SPARKALFALADKVITRKK 378
>sp|P18900|COQ1_YEAST Hexaprenyl pyrophosphate synthase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COQ1 PE=1
SV=1
Length = 473
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 227/439 (51%), Gaps = 107/439 (24%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN-- 144
+P SLV+ E++ LAK + +++ + P L Y+F+ EGK+ RP ++LL++ AL+
Sbjct: 44 NPISLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFE--TEGKKVRPLLVLLLSRALSEI 101
Query: 145 ------------VRVPE---------------------PLH--DGVE---------DALA 160
VPE PLH G++ + L
Sbjct: 102 PMTERNHLKIDKSDVPEDPIYSKPSQNQLFQRPASSISPLHILHGIKPLNPLTKGPEPLP 161
Query: 161 TELRTRQQCI-------AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLA 213
E +Q+ I AEI EMIH ASLLHDDV+D +DTRRG S N NK +AVLA
Sbjct: 162 EETFDKQRGILPKQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNK-MAVLA 220
Query: 214 GDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSS----------------- 256
GDFLL RA V+++ L N EVV L++ + +LV GE MQ+ +S
Sbjct: 221 GDFLLGRATVSISRLHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPV 280
Query: 257 -------------------------DQ--RCSMDYYMQKTYYKTASLISNSCKAIALLAG 289
DQ + +YY+ KTY KTA+LIS SC+ A+L+G
Sbjct: 281 PSKKLEVKEHDFRVPSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSG 340
Query: 290 QTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEF 349
+ V +D+G+NLG+ +QL+DD+LDFT + LGK S +D++ GI TAP+LFA +E
Sbjct: 341 ASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKED 400
Query: 350 PQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAI-DSLPENNDEDV 408
P L ++ + F + +V+ ++ + GI KT+ LA ++ + A + DSLPE++
Sbjct: 401 PSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESD---- 456
Query: 409 TKSRRALLDLTHRVITRNK 427
+R AL LT+ ++TR K
Sbjct: 457 --ARSALEFLTNSILTRRK 473
>sp|P51268|PREA_PORPU Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1
Length = 323
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 201/337 (59%), Gaps = 23/337 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F + EL + L+S+ P L +AA++ F+ G GKR RP ++LL+A + + +
Sbjct: 8 FHPIEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAG--GKRLRPAIVLLVAKSTSEQ-- 63
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
E++ Q+ +AEITE+IH ASL+HDDV+D+ TRRG +++ + K+
Sbjct: 64 ------------QEIKPGQRRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTKI 111
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQK 268
AVLAGDFL +++ LA++ N EVV ++ V+ GE Q D S+D Y++K
Sbjct: 112 -AVLAGDFLFAQSSWYLANIGNLEVVKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEK 170
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
++YKTASL++ SC+ A+L +++ + YGK++GLA+Q++DDVLD G++ SLGK
Sbjct: 171 SFYKTASLVAASCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKP 230
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVK 388
S +D +G +TAPILFA+ + +L ++++ F D ++ +AL + KS GI K ++LA +
Sbjct: 231 SGADFMNGNLTAPILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKE 290
Query: 389 HANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 425
A + LP+ + +L +LTH +ITR
Sbjct: 291 QVQAALCCLQFLPK------SAPVSSLKELTHFIITR 321
>sp|Q1XDL8|PREA_PORYE Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1
Length = 323
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 203/337 (60%), Gaps = 23/337 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
F V EL L K L+++ P L +AA++ F G GKR RP ++ L+A A + +
Sbjct: 8 FYPVEQELCSLEKNLKAVAGTRHPILYAAAKHLFDAG--GKRVRPALVFLVAKATSEK-- 63
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
++ T Q+ +AEITE+IH ASL+HDD++D+ TRRG+ +++ + K+
Sbjct: 64 ------------QDINTGQKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHNLFNTKI 111
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQK 268
AVLAGDFL +++ LA+++N VV ++ V+ GE Q D S+D Y++K
Sbjct: 112 -AVLAGDFLFAQSSWYLANIENLAVVKAISKVITDFAEGEIRQGLVHFDPSISIDAYIEK 170
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
++YKTASLI+ SC+ A+L G ++ + YGK++GLA+Q++DDVLD TG++ SLGK
Sbjct: 171 SFYKTASLIAASCRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGKP 230
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVK 388
+ +D+ +G +T+P+LF++ + L ++++ F +S+++ L + +S GI K ++LA +
Sbjct: 231 AGADLINGNLTSPLLFSLTQEASLNDLIDREFCNSTDIASTLFLIKRSGGITKAKDLAKE 290
Query: 389 HANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 425
A + + LP+ + +L +LTH +ITR
Sbjct: 291 QVQAALSCLQFLPQ------STPVSSLKELTHFIITR 321
>sp|P31171|PREA_CYAPA Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1
Length = 323
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 216/334 (64%), Gaps = 23/334 (6%)
Query: 92 VADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPL 151
V +EL +L K L+ +V + P L++A+E+ F GKR RP ++LL++ A
Sbjct: 11 VENELDLLTKNLKKLVGSGHPILSAASEHLF--SASGKRPRPAIVLLISKA--------- 59
Query: 152 HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAV 211
+E+ + T +R + +AEITE+IH ASL+HDD+LD++D RRGI +++ G K+ A+
Sbjct: 60 --TMENEIIT---SRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKI-AI 113
Query: 212 LAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYY 271
LAGDFL +++ LA+L++ EVV L++ V+ GE + +++ Y++K++Y
Sbjct: 114 LAGDFLFAQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFY 173
Query: 272 KTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLS 331
KTASL++ S KA ALL+ VA ++YG++LGLA+Q++DD+LDFT ++ LGK S S
Sbjct: 174 KTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCS 233
Query: 332 DIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHAN 391
D++ G +TAP+LFA+E+ +L ++++ F + + + L+ + +++ I+KTRELA++HA
Sbjct: 234 DLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQ 293
Query: 392 LAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 425
+A +++LP ++ S+ AL +T V+ R
Sbjct: 294 VAIQCLENLPPSS------SKEALKLITKYVLER 321
>sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3
SV=1
Length = 323
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 157/305 (51%), Gaps = 30/305 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP + +L A A+ ++G IA + E IH A+LLHDDV
Sbjct: 44 GKRIRPMIAVLAARAVG-------YEG----------NAHVTIAALIEFIHTATLLHDDV 86
Query: 188 LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTG 247
+D++D RRG + N GN +VL GDF+ +RA + SL + +V+ +++ V + G
Sbjct: 87 VDESDMRRGKATANAAFGNAA-SVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEG 145
Query: 248 ETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGL 307
E +Q+ +D + + YM+ Y KTA L + + +LAG T E DYG+ LG
Sbjct: 146 EVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGT 205
Query: 308 AYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFED 362
A+QLIDD+LD+ LGK D+ G T P+L AM E+ +RT +EQG
Sbjct: 206 AFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQG-NG 264
Query: 363 SSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRV 422
++ LE + ++ TR+ A + A+ A AA+ LP+ T R AL+ L H
Sbjct: 265 RHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPD------TPWREALIGLAHIA 318
Query: 423 ITRNK 427
+ R++
Sbjct: 319 VQRDR 323
>sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispB PE=1 SV=1
Length = 323
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 157/305 (51%), Gaps = 30/305 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP + +L A A+ ++G IA + E IH A+LLHDDV
Sbjct: 44 GKRIRPMIAVLAARAVG-------YEG----------NAHVTIAALIEFIHTATLLHDDV 86
Query: 188 LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTG 247
+D++D RRG + N GN +VL GDF+ +RA + SL + +V+ +++ V + G
Sbjct: 87 VDESDMRRGKATANAAFGNAA-SVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEG 145
Query: 248 ETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGL 307
E +Q+ +D + + YM+ Y KTA L + + +LAG T E DYG+ LG
Sbjct: 146 EVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGT 205
Query: 308 AYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFED 362
A+QLIDD+LD+ LGK D+ G T P+L AM E+ +RT +EQG
Sbjct: 206 AFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQG-NG 264
Query: 363 SSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRV 422
++ LE + ++ TR+ A + A+ A AA+ LP+ T R AL+ L H
Sbjct: 265 RHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPD------TPWREALIGLAHIA 318
Query: 423 ITRNK 427
+ R++
Sbjct: 319 VQRDR 323
>sp|P44916|ISPB_HAEIN Octaprenyl-diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispB PE=1 SV=1
Length = 329
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 174/347 (50%), Gaps = 33/347 (9%)
Query: 86 LDPFSLVAD-ELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
+D +AD ++ + + + + + ++VP + Y + G GKR RP + +L A +L
Sbjct: 9 IDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGG--GKRIRPLIAVLAARSLG 66
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
+ A E IH ASLLHDDV+D++D RRG + N
Sbjct: 67 FEGSNSI-----------------TCATFVEFIHTASLLHDDVVDESDMRRGRATANAEF 109
Query: 205 GNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDY 264
GN +VL GDF+ +RA +A L++ ++++++A L GE Q+ +D S
Sbjct: 110 GNAA-SVLVGDFIYTRAFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEAN 168
Query: 265 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 324
YM+ Y KTA L + +A A++AG T DYG+ LG A+QL+DDVLD++ + +
Sbjct: 169 YMRVIYSKTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQA 228
Query: 325 LGKGSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGI 379
LGK D+ G T P+L AM ++ +R +EQG + + +D L + + + +
Sbjct: 229 LGKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREAIEQGGKREA-IDEVLAIMTEHKSL 287
Query: 380 QKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
A + A A AI+ LPE ++ ++AL+ L + + RN
Sbjct: 288 DYAMNRAKEEAQKAVDAIEILPE------SEYKQALISLAYLSVDRN 328
>sp|P55785|HEPS2_GEOSE Heptaprenyl diphosphate synthase component 2 OS=Geobacillus
stearothermophilus GN=hepT PE=3 SV=1
Length = 320
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 162/317 (51%), Gaps = 21/317 (6%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
+S ++D+L+ + + L V +E L AA + + G GKR RP +LL A
Sbjct: 7 YSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAG--GKRIRPVFVLLAARF------ 58
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
G D R + +A E+IH+ASL+HDDV+DDAD RRG ++ N+
Sbjct: 59 -----GQYDL------ERMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNR- 106
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQK 268
A+ GD+L +R+ +A L N +LA + + GE Q+ + Y+++
Sbjct: 107 FAMYTGDYLFARSLERMAELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRR 166
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
KTA LI+ SC+ AL AG + + +G +G+++Q+ DD+LDFTGT LGK
Sbjct: 167 IRRKTALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKP 226
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFE-DSSNVDIALEYLGKSRGIQKTRELAV 387
+ SD+ G +T P+L+A+ + + G E D + + + + ++ I+++ L+
Sbjct: 227 AGSDLLQGNVTLPVLYALSDERVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSD 286
Query: 388 KHANLAAAAIDSLPENN 404
++ + A +D LP N
Sbjct: 287 RYLDKALHLLDGLPMNE 303
>sp|P31114|HEPS2_BACSU Heptaprenyl diphosphate synthase component 2 OS=Bacillus subtilis
(strain 168) GN=hepT PE=1 SV=1
Length = 348
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 164/315 (52%), Gaps = 23/315 (7%)
Query: 89 FSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVP 148
+S + D++ ++ + L V ++ P L+ A + + G GKR RP +LL + +
Sbjct: 35 YSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAG--GKRIRPVFVLLSGMFGDYDI- 91
Query: 149 EPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKV 208
+ + +A EMIH+ASL+HDDV+DDA+ RRG ++ N++
Sbjct: 92 ----------------NKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRI 135
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQK 268
A+ GD++L+ + + + + +L+ + + GE Q+ + ++ Y+++
Sbjct: 136 -AMYTGDYMLAGSLEMMTRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRR 194
Query: 269 TYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKG 328
KTA LI+ SC+ A+ +G ++ + +G +G++YQ+IDD+LDFT T LGK
Sbjct: 195 IKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKP 254
Query: 329 SLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSS--NVDIALEYLGKSRGIQKTRELA 386
D+ G +T P+L+A++ P L+ ++ +++ ++ +E + K+ I+ + ++
Sbjct: 255 VGGDLLQGNVTLPVLYALKN-PALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVS 313
Query: 387 VKHANLAAAAIDSLP 401
+ A +++LP
Sbjct: 314 EMYLQKAFQKLNTLP 328
>sp|O66129|HEXB_MICLU Hexaprenyl-diphosphate synthase large subunit
((2E,6E)-farnesyl-diphosphate specific) OS=Micrococcus
luteus GN=hexs-b PE=1 SV=1
Length = 325
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 162/317 (51%), Gaps = 30/317 (9%)
Query: 99 LAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDA 158
+ KRL + ++ + AA + G GKR RP +LL L+D +D
Sbjct: 17 VEKRLYECIQSDSETINKAAHHILSSG--GKRVRPMFVLLSGF---------LNDTQKDD 65
Query: 159 LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLL 218
L +RT A E++H+ASL+HDD +D++D RRG S++ +K A+ G FLL
Sbjct: 66 L---IRT-----AVSLELVHMASLVHDDYIDNSDMRRGNTSVHIAF-DKDTAIRTGHFLL 116
Query: 219 SRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLIS 278
+RA +A++ N++ + + + + GE QM + S Y+++ KTA LI
Sbjct: 117 ARALQNIATINNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIE 176
Query: 279 NSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGII 338
SC AL + + +G +G++YQ+IDD+LD+T A+LGK SDIR+G I
Sbjct: 177 ASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHI 236
Query: 339 TAPILFAM-----EEFPQLRTVVEQGFEDSSNVDIALEYL---GKSRGIQKTRELAVKHA 390
T P++ A+ ++ +L VV+ S++ D +Y+ K GI+ L+ K+
Sbjct: 237 TYPLMAAIANLKEQDDDKLEAVVKH--LTSTSDDEVYQYIVSQVKQYGIEPAELLSRKYG 294
Query: 391 NLAAAAIDSLPENNDED 407
+ A + L ++N +D
Sbjct: 295 DKAKYHLSQLQDSNIKD 311
>sp|Q86YH6|DLP1_HUMAN Decaprenyl-diphosphate synthase subunit 2 OS=Homo sapiens GN=PDSS2
PE=1 SV=2
Length = 399
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 167/323 (51%), Gaps = 26/323 (8%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A + R V+LL++ A P
Sbjct: 72 LLSDELSNIAMQVRKLVGTQHP-LLTTARGLVHDSWNSLQLRGLVVLLISKAAG---PSS 127
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
++ ++ + + + + Q+ +AEITE+IH+A L+H +++ + + G L + GNK+
Sbjct: 128 VNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQFGNKI 187
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDY---- 264
A+L+GDFLL+ AC LA L+NT+VV LLA+ + LV G + +TS + + D
Sbjct: 188 -AILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDIGIST 246
Query: 265 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 324
+ ++T+ +L++ SC+A LA AEV +AF YGK++ +++++ DV F S
Sbjct: 247 WKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTS 306
Query: 325 LGKGSLSDIRHGIITAPILFAME------EFPQLRTVVEQGFEDSSNVDIALEYLGKSRG 378
+ + +AP++ E Q+ E+G D + + E + +G
Sbjct: 307 ------DSMTFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGRLDYAKLR---ERIKAGKG 357
Query: 379 IQKTRELAVKHANLAAAAIDSLP 401
+ +L H N A A++S P
Sbjct: 358 VTSAIDLCRYHGNKALEALESFP 380
>sp|O24743|SDSA_RHOCA All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate
specific) OS=Rhodobacter capsulatus GN=sdsA PE=1 SV=1
Length = 325
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 168/344 (48%), Gaps = 33/344 (9%)
Query: 87 DPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVR 146
D + VA + + + + + + ++V + S +++ + G GKR RP + LL A A
Sbjct: 8 DILAPVAQDFAAMDQFINEGISSKVALVMSVSKHVVEAG--GKRMRPIMCLLAAYACG-- 63
Query: 147 VPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGN 206
T L+ Q+ +A I EM+H A+L+HDDV+D++ RRG + N N
Sbjct: 64 -------------ETNLKHAQK-LAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNN 109
Query: 207 KVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYM 266
+ AVL GDFL++RA L L N ++ +T + GE +Q+ + D Y+
Sbjct: 110 QT-AVLVGDFLIARAFDLLVDLDNMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEDIYL 168
Query: 267 QKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLG 326
Q + KT+ L + + A+LAG+ L + + G A+Q+IDD+LD+T + +LG
Sbjct: 169 QIIHGKTSRLFELATEGAAILAGKPEYREPLR-RFAGHFGNAFQIIDDILDYTSDADTLG 227
Query: 327 KGSLSDIRHGIITAPILFAM-----EEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQK 381
K D+ G T P++ AM E+ +R + G +S ++ + + S +
Sbjct: 228 KNIGDDLMEGKPTLPLIAAMQNTQGEQRDLIRRSIATG--GTSQLEQVIAIVQNSGALDY 285
Query: 382 TRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITR 425
+ A + A A++ LPE + R+AL++LT + R
Sbjct: 286 CHKRATEETERALQALEILPE------STYRQALVNLTRLALDR 323
>sp|Q5U2R1|DLP1_RAT Decaprenyl-diphosphate synthase subunit 2 OS=Rattus norvegicus
GN=Pdss2 PE=2 SV=1
Length = 401
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 166/323 (51%), Gaps = 25/323 (7%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V + P L + A F + R V+LL++ A P
Sbjct: 73 LLSDELSNVAMQVRKLVGTQHP-LLTTARGFVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMKFGNKI 188
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSS-------DQRCS 261
AVL+GDFLL+ AC LA L+NT+VV LLA+ + LV G + + S+ D R S
Sbjct: 189 -AVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPDDIRIS 247
Query: 262 MDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGT 321
+ ++T+ +L++ SCKA LA A V +AF YGK++ +++++ D+ F
Sbjct: 248 T--WKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPFIKD 305
Query: 322 SASLGKGSLSDIRHGIITAPILFAMEEFPQ---LRTVVEQGFEDSSNVDIALEYLGKSRG 378
AS K + +AP++ E + ++ + E + N E + +G
Sbjct: 306 KASDSK------TFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGRLNYTKLRETIKAGKG 359
Query: 379 IQKTRELAVKHANLAAAAIDSLP 401
+ +L H N A A++S P
Sbjct: 360 VTSAIDLCRYHGNKALEALESFP 382
>sp|Q33DR3|DLP1_MOUSE Decaprenyl-diphosphate synthase subunit 2 OS=Mus musculus GN=Pdss2
PE=1 SV=2
Length = 401
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 164/321 (51%), Gaps = 21/321 (6%)
Query: 91 LVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEP 150
L++DELS +A ++R +V P L + A + R V+LL++ A P
Sbjct: 73 LLSDELSNIAMQVRKLVGTGHP-LLTTARALVHDSRHNLQLRGLVVLLISKAAG---PST 128
Query: 151 LHDGVEDA-LATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSL-NFVMGNKV 208
+ ++ + + + + Q+ +AEITE+IH A L+H +++ ++ + G L + GNK+
Sbjct: 129 RNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQFGNKI 188
Query: 209 LAVLAGDFLLSRACVALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMD----- 263
A+L+GDFLL+ AC LA L+NT+VV LL++ + LV G + + S+ + D
Sbjct: 189 -AILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPDDIGIS 247
Query: 264 YYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSA 323
+ ++T+ +L++ SC+A LA A V +AF YGK++ +++++ D+ F A
Sbjct: 248 TWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPFIKDKA 307
Query: 324 SLGKGSLSDIRHGIITAPILFAMEEFPQ---LRTVVEQGFEDSSNVDIALEYLGKSRGIQ 380
S K + +AP++ E + ++ + E + S N E + +G+
Sbjct: 308 SDSK------TFNLNSAPVVLHQEFLGRDLWIKQIGEAQEKGSLNYSKLRETIKAGKGVT 361
Query: 381 KTRELAVKHANLAAAAIDSLP 401
+L H N A A++S P
Sbjct: 362 SAIDLCRYHGNKALEALESFP 382
>sp|Q53479|IDSA_METTM Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=idsA PE=1 SV=3
Length = 325
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 40/349 (11%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVPK-LASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
L +S VAD KR+ + P L A+E+ G GK+ RP++ LL A+
Sbjct: 8 LRKYSEVAD------KRIMECISDITPDTLLKASEHLITAG--GKKIRPSLALLSCEAVG 59
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
P EDA +A E+IH SL+HDD++DD + RRG S++ +
Sbjct: 60 ---GNP-----EDAAG---------VAAAIELIHTFSLIHDDIMDDDEMRRGEPSVHVIW 102
Query: 205 GNKVLAVLAGDFLLSRACVALASLKNTE-VVTLLATVVEHLVT---GETMQMTTSSDQRC 260
G +A+LAGD L S+A A+ ++E V LA VV+ V G+ + M
Sbjct: 103 GEP-MAILAGDVLFSKAFEAVIRNGDSERVKDALAVVVDSCVKICEGQALDMGFEERLDV 161
Query: 261 SMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTG 320
+ D YM+ Y KTA+LI+ + KA A++ G + DYGK +GLA+Q+ DD LD
Sbjct: 162 TEDEYMEMIYKKTAALIAAATKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVS 221
Query: 321 TSASLGKGSLSDIRHGIITAPILFAMEEFPQ---LRTVVEQGFEDSSNVDIALEYLGKSR 377
SLGK SDI G +T ++ A+EE + R + G D +V A+E +
Sbjct: 222 DEESLGKPVGSDIAEGKMTLMVVKALEEASEEDRERLISILGSGDEGSVAEAIEIFERYG 281
Query: 378 GIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
Q E+A+ + +A ++ L +++ +R AL+ + V+ R
Sbjct: 282 ATQYAHEVALDYVRMAKERLEILEDSD------ARDALMRIADFVLERE 324
>sp|O26156|IDSA_METTH Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=idsA PE=3 SV=1
Length = 325
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 175/350 (50%), Gaps = 42/350 (12%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVPK-LASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
L +S +ADE R+R + P+ L A+E+ G GK+ RP++ LL + A+
Sbjct: 8 LRKYSEMADE------RIRESISDITPETLLRASEHLITAG--GKKIRPSLALLSSEAVG 59
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
+P DA +A E+IH SL+HDD++DD + RRG +++ +
Sbjct: 60 ---GDP-----GDAAG---------VAAAIELIHTFSLIHDDIMDDDEIRRGEPAVHVLW 102
Query: 205 GNKVLAVLAGDFLLSRACVALASLKNTEVVT-LLATVVEHLVT---GETMQMTTSSDQRC 260
G +A+LAGD L S+A A+ ++E+V LA VV+ V G+ + M
Sbjct: 103 GEP-MAILAGDVLFSKAFEAVIRNGDSEMVKEALAVVVDSCVKICEGQALDMGFEERLDV 161
Query: 261 SMDYYMQKTYYKTASLISNSCKAIALLAGQTA-EVAILAFDYGKNLGLAYQLIDDVLDFT 319
+ + YM+ Y KTA+LI+ + KA A++ G + E+A L DYG+ +GLA+Q+ DD LD
Sbjct: 162 TEEEYMEMIYKKTAALIAAATKAGAIMGGGSPQEIAALE-DYGRCIGLAFQIHDDYLDVV 220
Query: 320 GTSASLGKGSLSDIRHGIITAPILFAME---EFPQLRTVVEQGFEDSSNVDIALEYLGKS 376
SLGK SDI G +T ++ A+E E + R + G D V A+E +
Sbjct: 221 SDEESLGKPVGSDIAEGKMTLMVVKALERASEKDRERLISILGSGDEKLVAEAIEIFERY 280
Query: 377 RGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
+ +A+ H +A ++ L E++ +R AL + V+ R
Sbjct: 281 GATEYAHAVALDHVRMAKERLEVLEESD------AREALAMIADFVLERE 324
>sp|P95999|GGPS_SULSO Geranylgeranyl diphosphate synthase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=gds
PE=3 SV=2
Length = 332
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 170/354 (48%), Gaps = 38/354 (10%)
Query: 87 DPFSLVADEL-SILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNV 145
D SL +E+ + + R+++ V + L A+ + F G GKR RP VL+
Sbjct: 4 DDLSLYFNEIVNNVNFRIKNFVKSNFKTLEEASFHLFTAG--GKRLRPLVLV-------- 53
Query: 146 RVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMG 205
D + + R R A E++H +L+HDD++D+ RRG+ +++ G
Sbjct: 54 --------SSSDLIGGD-RERAYKAAAAVEILHNFTLVHDDIMDNDGLRRGLPTVHVKWG 104
Query: 206 NKVLAVLAGDFLLSRACVAL-ASLK----NT--EVVTLLATVVEHLVTGETMQMTTSSDQ 258
+ +A+LAGD+L ++A AL +LK NT + ++ T +E + G+ M M+ +
Sbjct: 105 -EPMAILAGDYLHAKAFEALNEALKGLDGNTFYKAFSIFITSIEIISEGQAMDMSFENRL 163
Query: 259 RCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF 318
+ + Y+Q KTA L S S ++ +V +YG NLG+++Q++DD+L
Sbjct: 164 DVTEEEYIQMIKGKTAMLFSCSAALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGI 223
Query: 319 TGTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRT---VVEQGFEDSSNVDI--ALEYL 373
G LGK SDIR G T ++ + E + V G +++ D+ A E +
Sbjct: 224 IGDEKELGKPIYSDIREGKKTILVIKTLSEATEDEKKILVSTLGNKEAKKEDLERASEII 283
Query: 374 GKSRGIQKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRNK 427
K +Q +LA K+++LA + +P +N + +AL L I R K
Sbjct: 284 RK-HSLQYAYDLAKKYSDLAIENLREIPVSN----KTAEKALKYLAQFTIQRRK 332
>sp|P39464|GGPS_SULAC Geranylgeranyl diphosphate synthase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=gds PE=1 SV=1
Length = 330
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 103 LRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATE 162
++S + +VPKL A+ + F G GKR RP +L + + +
Sbjct: 19 IKSYISGDVPKLYEASYHLFTSG--GKRLRPLILTISSDLFGGQ---------------- 60
Query: 163 LRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA- 221
R R E++H +L+HDD++D + RRG+ +++ G LA+LAGD L ++A
Sbjct: 61 -RERAYYAGAAIEVLHTFTLVHDDIMDQDNIRRGLPTVHVKYGLP-LAILAGDLLHAKAF 118
Query: 222 ---CVALASLKNTEVVTLLATVVEHLVT---GETMQMTTSSDQRCSMDYYMQKTYYKTAS 275
AL L + ++ ++ G+ + M Y+ KTA+
Sbjct: 119 QLLTQALRGLPSETIIKAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDMISRKTAA 178
Query: 276 LISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRH 335
L S S AL+AG L D+G NLG+A+Q++DD+L T LGK SDIR
Sbjct: 179 LFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKPVFSDIRE 238
Query: 336 GIITAPILFAME 347
G T ++ +E
Sbjct: 239 GKKTILVIKTLE 250
>sp|Q58270|IDSA_METJA Short chain isoprenyl diphosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=idsA PE=3 SV=1
Length = 327
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 29/241 (12%)
Query: 113 KLASAAEYFFKMGVEGKRFRP--TVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCI 170
KL +A+++ G GKR RP TV+ M D +E+ L
Sbjct: 34 KLYNASKHLLFAG--GKRIRPYLTVVTYMLKK----------DDIEEVLPA--------- 72
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKN 230
A E+IH +L+HDD++D+ D RRG +++ V G +A+LAGD L ++A A++ +K+
Sbjct: 73 AAAVELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEP-MAILAGDLLYAKAFEAVSRIKD 131
Query: 231 T----EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIAL 286
EV+ +L+ + G+ M M + +M+ Y+ KT +L+ S A+
Sbjct: 132 NKKAHEVLKILSKACVEVCEGQAMDMEFEN-YYPTMEEYLDMIRKKTGALLEASVGIGAV 190
Query: 287 LAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAM 346
+A E +Y K +GL +Q+ DDVLD G LGK SDIR G T ++ A+
Sbjct: 191 MADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHAL 250
Query: 347 E 347
+
Sbjct: 251 K 251
>sp|Q3IPL1|GFPS_NATPD Geranylfarnesyl diphosphate synthase OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=idsA3 PE=1 SV=1
Length = 341
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 166/347 (47%), Gaps = 25/347 (7%)
Query: 90 SLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATAL-NVRV 147
S +A+ I+ + + + + P +L SA+ Y G GKR RPT+LLL A +L +V
Sbjct: 9 SAIAERREIVNEAVSEQLPVQKPERLYSASRYLLDAG--GKRLRPTILLLAAESLADV-- 64
Query: 148 PEPL---HDGVEDALATELRTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVM 204
EPL + E+ ++ E+I +L+HDD++DD D RRG+ +++
Sbjct: 65 -EPLSADYRQFPSLPGDEVDVLSAAVS--IEVIQSFTLIHDDIMDDDDLRRGVPAVHREY 121
Query: 205 GNKVLAVLAGDFLLSRAC-----VALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQR 259
+ A+LAGD L S+A + ++ E + LAT + G+ + + +
Sbjct: 122 DLET-AILAGDTLYSKAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDVDFENRSD 180
Query: 260 CSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFT 319
+ + Y++ +KTA L + + A+L G E YG ++G A+Q+ DD+LD T
Sbjct: 181 VTTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLT 240
Query: 320 GTSASLGKGSLSDIRHGIITAPILFAMEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGI 379
S LGK SD+ T L A ++ + +V D + ++ A++ L + I
Sbjct: 241 APSDELGKQRGSDLVENKRTVITLHARDQGIDVEGLVSDDPSD-AEIEAAVQTLEDAGSI 299
Query: 380 QKTRELAVKHANLAAAAIDSLPENNDEDVTKSRRALLDLTHRVITRN 426
RE+A+ +D LPEN ++R+ L D+ ++ R+
Sbjct: 300 DFAREMALDLVTSGKERLDVLPEN------EARQLLEDIADFLVERS 340
>sp|Q94ID7|GGPPS_HEVBR Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea
brasiliensis GN=GGPS PE=1 SV=1
Length = 370
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP + L + G D++A A EMIH SL+HDD+
Sbjct: 118 GKRVRPALCLAACELV----------GGNDSMAMP-------AACAVEMIHTMSLIHDDL 160
Query: 188 --LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA-------CVALASLKNTEVVTLLA 238
+D+ D RRG + + V G V AVLAGD LL+ A + ++S + V LA
Sbjct: 161 PCMDNDDLRRGKPTNHIVFGEDV-AVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELA 219
Query: 239 TVV--EHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAI 296
+ E LV G+ + + + ++ +KTA L+ + A+L G T E
Sbjct: 220 KAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVE 279
Query: 297 LAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
Y +++GL +Q++DD+LD T +S LGK + D+ +T P L +E+
Sbjct: 280 KLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEK 331
>sp|P0A5H8|EFPP_MYCTU (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium tuberculosis
GN=Rv3398c PE=1 SV=1
Length = 359
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GK RP ++ + A A +P H + A++ EL +H SL+HDD+
Sbjct: 72 GKAIRPALVFVAAEAAGA---DP-HSAIPGAVSVEL-------------VHNFSLVHDDL 114
Query: 188 LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVE---HL 244
+D + RR ++ + G+ +A+LAGD +LS A L + V L + E L
Sbjct: 115 MDRDEHRRHRPTVWALWGD-AMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL 173
Query: 245 VTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKN 304
+ G+ S ++D ++ KTA+L++ S + ALLAG V YG++
Sbjct: 174 IRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRH 233
Query: 305 LGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 344
+GLA+QL+DD+L G GK SD+R T P+ +
Sbjct: 234 IGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTW 273
>sp|P0A5H9|EFPP_MYCBO (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3431c PE=3 SV=1
Length = 359
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GK RP ++ + A A +P H + A++ EL +H SL+HDD+
Sbjct: 72 GKAIRPALVFVAAEAAGA---DP-HSAIPGAVSVEL-------------VHNFSLVHDDL 114
Query: 188 LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATVVE---HL 244
+D + RR ++ + G+ +A+LAGD +LS A L + V L + E L
Sbjct: 115 MDRDEHRRHRPTVWALWGD-AMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATREL 173
Query: 245 VTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKN 304
+ G+ S ++D ++ KTA+L++ S + ALLAG V YG++
Sbjct: 174 IRGQAADTAFESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRH 233
Query: 305 LGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 344
+GLA+QL+DD+L G GK SD+R T P+ +
Sbjct: 234 IGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTW 273
>sp|P48368|CRTE_CYAPA Geranylgeranyl pyrophosphate synthase homolog OS=Cyanophora
paradoxa GN=crtE PE=3 SV=1
Length = 300
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 30/253 (11%)
Query: 122 FKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVAS 181
+ + GKR RP +L +A+ E +E AL T A EMIH S
Sbjct: 43 YSLSAGGKRIRP--ILCLASC------ELAGGTMEMALPT---------ACALEMIHTMS 85
Query: 182 LLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALAS-LKNTE---VVT 235
L+HDD+ +D+ RRG + + + G LA+LAGD LL+ A +A+ KN +V
Sbjct: 86 LIHDDLPAMDNDSYRRGKPTNHIIYGED-LAILAGDALLAYAFEFIATQTKNVPADLIVK 144
Query: 236 LLATVVEH-----LVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQ 290
++A V LV G+ + +++ +++ +KT +L+ + + ALLAG
Sbjct: 145 VIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHKTGALLEAAVLSGALLAGA 204
Query: 291 TAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE-F 349
+ Y +N+GLA+Q+IDDVLD T LGK D++ T P + +EE
Sbjct: 205 KEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESI 264
Query: 350 PQLRTVVEQGFED 362
Q +VE+ E+
Sbjct: 265 KQAELLVEEAKEE 277
>sp|Q43133|GGPPS_SINAL Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
OS=Sinapis alba GN=GGPS1 PE=1 SV=1
Length = 366
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 126/263 (47%), Gaps = 35/263 (13%)
Query: 101 KRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDAL 159
K L S V P K+ A Y G GKR RP VL + A L G E++L
Sbjct: 85 KALDSAVPLREPLKIHEAMRYSLLAG--GKRVRP-VLCIAACELV---------GGEESL 132
Query: 160 ATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFL 217
A R EMIH SL+HDD+ +D+ D RRG + + V G V AVLAGD L
Sbjct: 133 AMPARC-------AVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDV-AVLAGDAL 184
Query: 218 LSRACVALASLKNTEV--------VTLLATVV--EHLVTGETMQMTTSSD--QRCSMDYY 265
LS A LAS ++EV V LA + E LV G+ + +++ +++
Sbjct: 185 LSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHL 244
Query: 266 MQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASL 325
+KTA+L+ S ++ G + E + + +GL +Q++DD+LD T +S L
Sbjct: 245 KFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQEL 304
Query: 326 GKGSLSDIRHGIITAPILFAMEE 348
GK + D+ +T P L +E+
Sbjct: 305 GKTAGKDLIADKLTYPKLMGLEK 327
>sp|Q8PYS1|GFPS_METMA Geranylfarnesyl diphosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0789 PE=1 SV=1
Length = 295
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 104 RSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATEL 163
S+ + E P L E+ G GKR RP +LLL++ + +
Sbjct: 28 ESITLIEDPGLKKMVEHVCHSG--GKRIRPIILLLVSE-----------------ICSGS 68
Query: 164 RTRQQCIAEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACV 223
+R A EM+H ASL+HDD+LD RR + S G A+L GD+L++++ +
Sbjct: 69 YSRSLNAALAVEMMHSASLIHDDLLDQGLVRRNLPSAPEKFGPSG-ALLCGDYLIAKS-I 126
Query: 224 ALASLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKA 283
A S +V+ + GE + + + DY+ + Y KTASL + S
Sbjct: 127 AFISPYGEKVIQDFGKAGMDMAEGEVLDLKLEDESFGENDYF-KCIYKKTASLFAISASI 185
Query: 284 IALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDF 318
A G E+A +G LG AYQ++DD+L+F
Sbjct: 186 GAYTGGAEEELAERFSHFGNALGTAYQIVDDILEF 220
>sp|Q8PW34|GGPP_METMA Geranylgeranyl diphosphate synthase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=MM_1767 PE=3 SV=1
Length = 324
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 33/302 (10%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATAL--NVRVPEPLHDGVEDALATELRTRQQCI 170
+L A+ Y G GKR RP VL+L A A+ N+R P A+A EL
Sbjct: 32 ELYKASRYLVDAG--GKRLRPAVLILAAEAVGSNLRSVLPA------AVAVEL------- 76
Query: 171 AEITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKN 230
+H +L+HDD++D D RRG+ +++ G + A+LAGD L S+A L+ ++N
Sbjct: 77 ------VHNFTLIHDDIMDRDDIRRGMPAVHVKWG-EAGAILAGDTLYSKAFEILSKVEN 129
Query: 231 TEVVTL-----LATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIA 285
V L L+ + G+ + M + ++ + Y++ KT+ L + + K A
Sbjct: 130 EPVRVLKCMDVLSKTCTEICEGQWLDMDFETRKKVTESEYLEMVEKKTSVLYAAAAKIGA 189
Query: 286 LLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFA 345
LL G + EVA +YG+ +G+ +Q+ DDVLD T LGK SD+ G T ++ A
Sbjct: 190 LLGGASDEVAEALSEYGRLIGIGFQMYDDVLDMTAPEEVLGKVRGSDLMEGKYTLIVINA 249
Query: 346 MEEFPQLRTVVEQGFEDSSNVDIALEYLGKSRGIQKTRELAVKHANLAAAAIDSL---PE 402
E+ +L + +G + A+ L + + + LA+ + +D L PE
Sbjct: 250 FEKGVKL-DIFGKGEATLEETEAAVRTLTECGSLDYVKNLAISYIEEGKEKLDVLRDCPE 308
Query: 403 NN 404
Sbjct: 309 KT 310
>sp|P34802|GGPP1_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit
1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1
SV=2
Length = 371
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 86 LDPFSLVADELSILAKRLRSMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMATALN 144
D S + + ++ K L S V P K+ A Y G GKR RP VL + A L
Sbjct: 74 FDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAG--GKRVRP-VLCIAACELV 130
Query: 145 VRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNF 202
G E++ A A EMIH SL+HDD+ +D+ D RRG + +
Sbjct: 131 ---------GGEESTAMP-------AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 174
Query: 203 VMGNKVLAVLAGDFLLSRACVALASLKNTEVVTLLATV-----------VEHLVTGETMQ 251
V G V AVLAGD LLS A LAS +++VV+ + V E LV G+ +
Sbjct: 175 VFGEDV-AVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVD 233
Query: 252 MTTSSD--QRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAY 309
+++ +++ +KTA+L+ S A++ G + + + + +GL +
Sbjct: 234 ISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLF 293
Query: 310 QLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
Q++DD+LD T +S LGK + D+ +T P + +E+
Sbjct: 294 QVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEK 332
>sp|P17060|CRTE_RHOCB Geranylgeranyl pyrophosphate synthase OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=crtE PE=3
SV=1
Length = 289
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 116/249 (46%), Gaps = 41/249 (16%)
Query: 97 SILAKRLRSMVVAEVPKLASAA-EYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGV 155
S L K L + E P L +AA Y G G R RPT+L+ +A A P V
Sbjct: 9 SALVKALSPEALGESPPLLAAALPYGVFPG--GARIRPTILVSVALACGDDCP-----AV 61
Query: 156 EDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLA 213
DA A L E++H ASL+HDD+ D+AD RRG SL+ N+ LAVLA
Sbjct: 62 TDAAAVAL-----------ELMHCASLVHDDLPAFDNADIRRGKPSLHKAY-NEPLAVLA 109
Query: 214 GDFLLSRACVALA---------SLKNTEVVTLLATVVEHLVTGETMQMTTSSDQRCSMDY 264
GD LL R LA +LK + L+ + G+ + S+ + +
Sbjct: 110 GDSLLIRGFEVLADVGAVNPDRALKLISKLGQLSGARGGICAGQAWE----SESKVDLAA 165
Query: 265 YMQKTYYKTASLISNSCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSAS 324
Y Q KT +L + + A+ AG AE FD G +G A+Q+ DD+ D ++ +
Sbjct: 166 YHQA---KTGALFIAATQMGAIAAGYEAEPW---FDLGMRIGSAFQIADDLKDALMSAEA 219
Query: 325 LGKGSLSDI 333
+GK + DI
Sbjct: 220 MGKPAGQDI 228
>sp|P80042|GGPPS_CAPAN Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum
annuum GN=GGPS1 PE=3 SV=1
Length = 369
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 137/286 (47%), Gaps = 36/286 (12%)
Query: 77 IEDTDSQEQLDPFSLVADELSILAKRL--RSMVVAEVPKLASAAEYFFKMGVEGKRFRPT 134
IE ++E + F + E +I + +++V E + A Y G GKR RP
Sbjct: 67 IEAAQTEEPFN-FKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAG--GKRVRP- 122
Query: 135 VLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDAD 192
+L L A L + E+A+A A EMIH SL+HDD+ +D+ D
Sbjct: 123 MLCLAACEL-------VGGNQENAMAA---------ACAVEMIHTMSLIHDDLPCMDNDD 166
Query: 193 TRRGIGSLNFVMGNKVLAVLAGDFLLSRA----CVALASLKNTEVVTLLATV-----VEH 243
RRG + + + G V AVLAGD LL+ A + A + + +V +A + E
Sbjct: 167 LRRGKPTNHKIYGEDV-AVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEG 225
Query: 244 LVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQT-AEVAILAFDYG 302
LV G+ + + + S++ +KTA+L+ +S A+L G T EV L +
Sbjct: 226 LVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLR-RFA 284
Query: 303 KNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
+ +GL +Q++DD+LD T +S LGK + D+ T P L +E+
Sbjct: 285 RCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEK 330
>sp|Q9UWR6|GFPS_AERPX Geranylfarnesyl diphosphate synthase OS=Aeropyrum pernix GN=fgs
PE=1 SV=1
Length = 318
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 26/244 (10%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
+L+ A+ + K G GKR RP + LL A L E R +A
Sbjct: 17 RLSGASLHLIKAG--GKRLRPLITLLTARMLG---------------GLEAEARAIPLAA 59
Query: 173 ITEMIHVASLLHDDVLDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKNT- 231
E H SL+HDD++D + RRG+ + + V G+ A+LAGD L + A +A +
Sbjct: 60 SIETAHTFSLIHDDIMDRDEVRRGVPTTHVVYGDD-WAILAGDTLHAAAFKMIADSREWG 118
Query: 232 -------EVVTLLATVVEHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAI 284
+L+ + G+ M + Y+ KT +LI + +
Sbjct: 119 MSHEQAYRAFKVLSEAAIQISRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIG 178
Query: 285 ALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILF 344
A+ AG +E+ + + G N G+A+Q+ DD+L G GK +D+R G T +++
Sbjct: 179 AVAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIY 238
Query: 345 AMEE 348
A+++
Sbjct: 239 AVKK 242
>sp|Q42698|GGPPS_CATRO Geranylgeranyl pyrophosphate synthase, chloroplastic
OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1
Length = 357
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 12/186 (6%)
Query: 174 TEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLS-------RACVA 224
EMIH SL+HDD+ +D+ D RRG + + V G V AVLAGD LL+ A
Sbjct: 134 VEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDV-AVLAGDALLAFAFEHIATATKG 192
Query: 225 LASLKNTEVVTLLATVV--EHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCK 282
++S + VV LA + E LV G+ + + + +++ +KTA+L+ S
Sbjct: 193 VSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVV 252
Query: 283 AIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPI 342
A++ G E + + +GL +Q++DD+LD T +S LGK + D+ +T P
Sbjct: 253 LGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPK 312
Query: 343 LFAMEE 348
L +++
Sbjct: 313 LLGIDK 318
>sp|Q08291|ISPA_GEOSE Farnesyl diphosphate synthase OS=Geobacillus stearothermophilus
PE=1 SV=1
Length = 297
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 113 KLASAAEYFFKMGVEGKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAE 172
KL A Y + G GKR RP +LL AL G + A+ +A
Sbjct: 33 KLKKAMAYSLEAG--GKRIRPLLLLSTVRAL----------GKDPAVGLP-------VAC 73
Query: 173 ITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRACVALASLKN 230
EMIH SL+HDD+ +D+ D RRG + + V G + +A+LAGD LL+ A + + +
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFG-EAMAILAGDGLLTYAFQLITEIDD 132
Query: 231 TEV--------VTLLATVV--EHLVTGETMQMTTSSDQ-RCSMDYYMQKTYYKTASLISN 279
+ + LA E +V G+ M S Y+ + +KT ++
Sbjct: 133 ERIPPSVRLRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHR--HKTGKMLQY 190
Query: 280 SCKAIALLAGQTAEVAILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIIT 339
S A AL+ G A ++ +LGLA+Q+ DD+LD G +GK SD + T
Sbjct: 191 SVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKAT 250
Query: 340 APILFAM 346
P L ++
Sbjct: 251 YPALLSL 257
>sp|Q9ZU77|GGPP7_ARATH Geranylgeranyl pyrophosphate synthase 7, chloroplastic
OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1
Length = 347
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 30/233 (12%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP VL + A L G E+++A A EMIH SL+HDD+
Sbjct: 94 GKRVRP-VLCIAACELV---------GGEESVALP-------AACAVEMIHTMSLIHDDL 136
Query: 188 --LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA------CVALASLKNTEVVTLLAT 239
+D+ D RRG + + V G V AVLAGD L+S A A++ + + LA
Sbjct: 137 PCMDNDDLRRGKPTNHKVFGEDV-AVLAGDALISFAFEHLATSTAVSPARVVRAIGELAK 195
Query: 240 VV--EHLVTGETMQMTTSS-DQR-CSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVA 295
+ + LV G+ + +T+ DQ ++ +KTA L+ + A++ G + E
Sbjct: 196 AIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEV 255
Query: 296 ILAFDYGKNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEE 348
+ + +GL +Q++DD+LD T +S LGK + D+ +T P L +E+
Sbjct: 256 EKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEK 308
>sp|P21684|CRTE_PANAN Geranylgeranyl pyrophosphate synthase OS=Pantoea ananas GN=crtE
PE=3 SV=1
Length = 302
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 128 GKRFRPTVLLLMATALNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV 187
GKR RP +LLL A L V HDG+ D +A EM+H ASL+ DD+
Sbjct: 52 GKRIRPMLLLLTARDLGCAVS---HDGLLD------------LACAVEMVHAASLILDDM 96
Query: 188 --LDDADTRRGIGSLNFVMGNKVLAVLAGDFLLSRA------CVALASLKNTEVVTLLAT 239
+DDA RRG +++ G V A+LA LLS+A L L V+ L+
Sbjct: 97 PCMDDAKLRRGRPTIHSHYGEHV-AILAAVALLSKAFGVIADADGLTPLAKNRAVSELSN 155
Query: 240 VV--EHLVTGETMQMTTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAIL 297
+ + LV G+ ++ R S + + ++KT++L S + +++A ++E
Sbjct: 156 AIGMQGLVQGQFKDLSEGDKPR-SAEAILMTNHFKTSTLFCASMQMASIVANASSEARDC 214
Query: 298 AFDYGKNLGLAYQLIDDVLD 317
+ +LG A+QL+DD+ D
Sbjct: 215 LHRFSLDLGQAFQLLDDLTD 234
>sp|O66126|ISPA_MICLU Farnesyl diphosphate synthase OS=Micrococcus luteus GN=fps PE=3
SV=1
Length = 291
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 37/281 (13%)
Query: 83 QEQLDPFSLVADELSILAKRLRSMVVAEVPKLASAAEYFFKMGVEGKRFRPTVLLLMATA 142
QE+L ++ D L+++ + L + +L A Y G GKR RP ++L +
Sbjct: 3 QEKL---TMNRDFLNLINESLLNKYHPAQSRLHEAINYSLSAG--GKRIRPLLVLTTLDS 57
Query: 143 LNVRVPEPLHDGVEDALATELRTRQQCIAEITEMIHVASLLHDDV--LDDADTRRGIGSL 200
L HDG+ +A E MIH SL+HDD+ +D+ D RRG +
Sbjct: 58 LGGNA----HDGLPFGIALE-------------MIHTYSLIHDDLPAMDNDDYRRGKLT- 99
Query: 201 NFVMGNKVLAVLAGDFLLSRA--CVALASLKNTEV----VTLLATVV--EHLVTGETMQM 252
N ++ A+LAGD LL+ A C+ L + N E+ + LL+T +V G+ + M
Sbjct: 100 NHKRFDEATAILAGDALLTDAFQCI-LNTQLNAEIKLSLINLLSTASGSNGMVYGQMLDM 158
Query: 253 TTSSDQRCSMDYYMQKTYYKTASLISNSCKAIALLAG-QTAEVAILAFDYGKNLGLAYQL 311
+ +++ + +KT LI + + ++ A++ L GKN+GL +Q+
Sbjct: 159 Q-GEHKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQLNI-IGKNVGLMFQI 216
Query: 312 IDDVLDFTGTSASLGKGSLSDIRHGIITAPILFAMEEFPQL 352
DD+LD G+ ++GK SD+ + T L +E QL
Sbjct: 217 KDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQL 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,779,970
Number of Sequences: 539616
Number of extensions: 5730185
Number of successful extensions: 16386
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 16137
Number of HSP's gapped (non-prelim): 116
length of query: 427
length of database: 191,569,459
effective HSP length: 120
effective length of query: 307
effective length of database: 126,815,539
effective search space: 38932370473
effective search space used: 38932370473
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)