Query 014279
Match_columns 427
No_of_seqs 276 out of 2150
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:35:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014279.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014279hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 1.1E-39 2.4E-44 317.1 32.1 293 109-401 2-297 (302)
2 PTZ00343 triose or hexose phos 100.0 7.5E-39 1.6E-43 316.5 36.8 292 106-398 46-349 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 6.7E-38 1.5E-42 298.9 14.9 293 106-404 14-314 (316)
4 PLN00411 nodulin MtN21 family 100.0 3.1E-28 6.8E-33 240.2 34.2 286 111-403 15-334 (358)
5 PF08449 UAA: UAA transporter 100.0 2E-28 4.3E-33 238.1 30.7 283 114-402 5-302 (303)
6 KOG1443 Predicted integral mem 100.0 7E-28 1.5E-32 221.8 19.7 288 107-396 14-314 (349)
7 KOG1444 Nucleotide-sugar trans 100.0 9.4E-27 2E-31 217.6 26.2 292 111-406 14-309 (314)
8 PRK11689 aromatic amino acid e 100.0 8.6E-26 1.9E-30 218.8 32.9 268 107-398 6-288 (295)
9 PRK11272 putative DMT superfam 100.0 6.1E-25 1.3E-29 212.6 35.3 271 115-400 14-288 (292)
10 KOG1581 UDP-galactose transpor 99.9 1.4E-25 3.1E-30 206.9 24.2 287 106-401 11-317 (327)
11 PRK10532 threonine and homoser 99.9 1.8E-24 3.8E-29 209.4 32.4 255 122-399 25-283 (293)
12 PF06027 DUF914: Eukaryotic pr 99.9 2.9E-25 6.3E-30 214.9 26.2 273 126-406 30-314 (334)
13 PRK11453 O-acetylserine/cystei 99.9 2.4E-24 5.3E-29 209.1 32.2 275 108-400 7-290 (299)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 3E-24 6.5E-29 204.0 30.4 252 123-392 3-259 (260)
15 KOG1442 GDP-fucose transporter 99.9 3.9E-27 8.4E-32 213.4 6.8 294 110-409 29-339 (347)
16 PRK15430 putative chlorampheni 99.9 1.8E-23 3.9E-28 202.7 33.0 273 107-400 10-288 (296)
17 KOG1580 UDP-galactose transpor 99.9 4.8E-25 1E-29 195.7 13.1 266 122-396 26-312 (337)
18 KOG4510 Permease of the drug/m 99.9 4.3E-26 9.2E-31 206.0 2.3 279 105-399 35-327 (346)
19 TIGR03340 phn_DUF6 phosphonate 99.9 2.3E-21 5E-26 186.6 26.1 260 122-394 14-280 (281)
20 KOG1582 UDP-galactose transpor 99.9 1.3E-20 2.9E-25 170.8 21.6 289 103-399 37-334 (367)
21 COG0697 RhaT Permeases of the 99.9 1.3E-18 2.9E-23 167.1 33.5 263 122-398 20-288 (292)
22 TIGR00688 rarD rarD protein. T 99.8 1.5E-18 3.2E-23 164.8 29.4 244 108-372 5-255 (256)
23 COG5070 VRG4 Nucleotide-sugar 99.8 9E-20 2E-24 161.0 19.3 282 112-403 9-302 (309)
24 COG5006 rhtA Threonine/homoser 99.8 5.7E-17 1.2E-21 146.3 24.7 251 126-398 29-283 (292)
25 TIGR00776 RhaT RhaT L-rhamnose 99.8 7.4E-16 1.6E-20 148.7 27.3 261 110-397 6-288 (290)
26 KOG1583 UDP-N-acetylglucosamin 99.8 4.2E-18 9.1E-23 155.2 10.7 269 126-403 20-320 (330)
27 KOG2765 Predicted membrane pro 99.7 3.7E-17 8E-22 155.2 16.0 223 172-400 159-393 (416)
28 COG2962 RarD Predicted permeas 99.7 1.7E-14 3.7E-19 133.8 32.0 277 112-404 10-290 (293)
29 KOG3912 Predicted integral mem 99.7 1.1E-15 2.3E-20 139.8 22.0 279 122-400 15-337 (372)
30 PF03151 TPT: Triose-phosphate 99.7 2.5E-16 5.4E-21 137.4 15.3 145 253-397 1-153 (153)
31 PF04142 Nuc_sug_transp: Nucle 99.7 1.7E-15 3.7E-20 142.0 21.8 212 169-388 14-244 (244)
32 KOG2234 Predicted UDP-galactos 99.7 3.3E-14 7.1E-19 135.5 27.0 224 171-402 91-327 (345)
33 KOG2766 Predicted membrane pro 99.5 4.7E-15 1E-19 133.9 1.8 256 126-397 35-299 (336)
34 TIGR00803 nst UDP-galactose tr 99.3 2.3E-11 4.9E-16 113.0 11.8 189 196-395 2-222 (222)
35 PF00892 EamA: EamA-like trans 99.2 6E-11 1.3E-15 99.1 10.7 120 122-243 4-125 (126)
36 COG2510 Predicted membrane pro 99.2 1.1E-10 2.5E-15 95.0 9.9 135 253-396 4-138 (140)
37 COG2510 Predicted membrane pro 99.1 4.2E-10 9.1E-15 91.7 10.7 121 122-243 16-138 (140)
38 PF00892 EamA: EamA-like trans 99.1 7.3E-10 1.6E-14 92.4 10.6 124 262-396 1-125 (126)
39 KOG4314 Predicted carbohydrate 99.1 2.9E-10 6.3E-15 99.3 8.1 218 171-397 52-276 (290)
40 PF13536 EmrE: Multidrug resis 99.0 1.6E-09 3.4E-14 89.6 9.2 105 143-248 2-110 (113)
41 PF06800 Sugar_transport: Suga 99.0 1.5E-07 3.3E-12 88.3 22.0 210 169-394 42-268 (269)
42 PRK15430 putative chlorampheni 98.9 1E-07 2.3E-12 92.4 18.4 141 248-396 4-144 (296)
43 TIGR00688 rarD rarD protein. T 98.8 1.4E-07 3E-12 89.5 16.7 140 252-396 2-141 (256)
44 TIGR00950 2A78 Carboxylate/Ami 98.7 7.4E-07 1.6E-11 84.5 17.5 118 122-240 141-260 (260)
45 TIGR03340 phn_DUF6 phosphonate 98.7 3.6E-07 7.9E-12 87.9 15.5 133 254-397 3-135 (281)
46 PLN00411 nodulin MtN21 family 98.6 2.9E-06 6.3E-11 84.3 16.8 136 253-397 14-156 (358)
47 PRK10532 threonine and homoser 98.5 7.8E-06 1.7E-10 79.2 17.0 120 122-244 161-281 (293)
48 PRK11272 putative DMT superfam 98.4 1E-05 2.2E-10 78.4 16.3 122 122-245 163-286 (292)
49 PF05653 Mg_trans_NIPA: Magnes 98.4 1E-06 2.2E-11 85.3 9.2 63 181-243 59-121 (300)
50 PRK11689 aromatic amino acid e 98.4 1E-05 2.2E-10 78.4 15.7 119 122-244 169-287 (295)
51 PRK13499 rhamnose-proton sympo 98.4 0.00035 7.5E-09 68.5 25.8 281 108-397 6-341 (345)
52 PTZ00343 triose or hexose phos 98.3 2.2E-05 4.8E-10 78.0 17.2 138 250-396 47-185 (350)
53 PRK15051 4-amino-4-deoxy-L-ara 98.3 1.6E-05 3.4E-10 65.3 13.2 64 180-243 45-108 (111)
54 PRK02971 4-amino-4-deoxy-L-ara 98.3 1.6E-05 3.6E-10 66.9 13.0 119 252-398 2-123 (129)
55 COG2962 RarD Predicted permeas 98.3 2.7E-05 5.8E-10 73.1 15.5 139 250-396 5-143 (293)
56 PRK11453 O-acetylserine/cystei 98.2 5.9E-05 1.3E-09 73.2 17.3 124 122-245 156-288 (299)
57 PF03151 TPT: Triose-phosphate 98.2 9.1E-05 2E-09 64.2 14.9 128 116-243 7-152 (153)
58 TIGR00817 tpt Tpt phosphate/ph 98.1 0.00012 2.7E-09 71.0 15.8 123 262-395 12-135 (302)
59 PF13536 EmrE: Multidrug resis 98.0 0.0002 4.4E-09 58.9 12.5 71 328-399 37-108 (113)
60 COG0697 RhaT Permeases of the 97.9 0.00092 2E-08 63.8 17.1 120 122-245 167-288 (292)
61 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00051 1.1E-08 66.4 13.4 113 123-243 166-287 (290)
62 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.00023 4.9E-09 60.0 9.1 72 175-246 51-124 (129)
63 PRK10452 multidrug efflux syst 97.6 0.0009 2E-08 55.4 10.5 71 175-245 33-104 (120)
64 PRK15051 4-amino-4-deoxy-L-ara 97.6 0.00086 1.9E-08 55.0 10.1 57 340-396 52-108 (111)
65 KOG2922 Uncharacterized conser 97.6 0.00016 3.6E-09 68.7 6.5 215 177-399 69-308 (335)
66 PRK10650 multidrug efflux syst 97.5 0.0016 3.4E-08 53.1 11.2 71 173-243 36-107 (109)
67 PRK09541 emrE multidrug efflux 97.5 0.0013 2.9E-08 53.7 10.5 72 174-245 32-104 (110)
68 PF08449 UAA: UAA transporter 97.5 0.0031 6.8E-08 61.3 15.1 135 110-244 155-297 (303)
69 COG2076 EmrE Membrane transpor 97.5 0.00095 2.1E-08 53.6 9.0 72 174-245 32-104 (106)
70 PRK11431 multidrug efflux syst 97.5 0.0017 3.7E-08 52.6 10.5 72 173-244 30-102 (105)
71 COG4975 GlcU Putative glucose 97.4 3.3E-05 7E-10 70.5 0.2 242 137-397 27-285 (288)
72 PF06027 DUF914: Eukaryotic pr 97.3 0.0026 5.7E-08 62.3 12.2 69 331-399 85-153 (334)
73 COG5006 rhtA Threonine/homoser 97.3 0.008 1.7E-07 55.5 14.1 122 119-242 158-280 (292)
74 PF04657 DUF606: Protein of un 97.2 0.014 3.1E-07 49.7 13.8 130 254-394 3-138 (138)
75 PRK10650 multidrug efflux syst 97.2 0.014 3E-07 47.5 12.9 53 344-396 54-107 (109)
76 PRK10452 multidrug efflux syst 97.2 0.0047 1E-07 51.2 10.0 55 344-398 49-104 (120)
77 PF06800 Sugar_transport: Suga 97.1 0.0064 1.4E-07 57.5 12.1 112 123-240 152-267 (269)
78 PF04142 Nuc_sug_transp: Nucle 97.1 0.0013 2.8E-08 61.9 7.3 75 326-400 18-92 (244)
79 PRK13499 rhamnose-proton sympo 97.1 0.014 3.1E-07 57.3 14.2 139 251-399 6-155 (345)
80 PF04657 DUF606: Protein of un 97.0 0.028 6E-07 48.0 13.4 115 126-241 18-138 (138)
81 PRK09541 emrE multidrug efflux 96.9 0.0078 1.7E-07 49.2 8.7 56 343-398 48-104 (110)
82 PF00893 Multi_Drug_Res: Small 96.6 0.014 3.1E-07 46.2 8.4 60 176-235 33-93 (93)
83 COG2076 EmrE Membrane transpor 96.4 0.023 4.9E-07 45.7 8.5 54 344-397 49-103 (106)
84 PRK11431 multidrug efflux syst 96.4 0.035 7.6E-07 44.9 9.7 53 344-396 48-101 (105)
85 KOG1581 UDP-galactose transpor 96.4 0.064 1.4E-06 51.0 12.5 135 107-241 170-310 (327)
86 TIGR00803 nst UDP-galactose tr 96.4 0.036 7.8E-07 51.2 11.0 66 176-241 156-221 (222)
87 PF07857 DUF1632: CEO family ( 96.1 0.0078 1.7E-07 56.6 5.0 132 253-402 1-139 (254)
88 KOG2234 Predicted UDP-galactos 96.0 0.38 8.3E-06 46.9 15.9 117 277-396 44-163 (345)
89 KOG4510 Permease of the drug/m 95.9 0.0089 1.9E-07 55.6 4.2 117 125-242 207-323 (346)
90 PF05653 Mg_trans_NIPA: Magnes 95.7 0.065 1.4E-06 52.0 9.6 117 250-396 5-121 (300)
91 COG3238 Uncharacterized protei 95.6 0.42 9.1E-06 41.1 12.9 136 251-396 4-145 (150)
92 KOG1441 Glucose-6-phosphate/ph 95.4 0.053 1.2E-06 52.7 7.7 137 107-244 161-307 (316)
93 PF00893 Multi_Drug_Res: Small 95.3 0.23 4.9E-06 39.2 9.8 46 343-388 47-93 (93)
94 PF10639 UPF0546: Uncharacteri 95.2 0.05 1.1E-06 44.5 5.8 70 172-242 42-112 (113)
95 COG3238 Uncharacterized protei 95.2 0.75 1.6E-05 39.6 13.0 118 125-243 21-145 (150)
96 PF10639 UPF0546: Uncharacteri 93.1 0.59 1.3E-05 38.2 7.9 52 343-394 59-111 (113)
97 KOG2765 Predicted membrane pro 92.7 0.072 1.6E-06 52.0 2.4 74 328-401 162-235 (416)
98 PF06379 RhaT: L-rhamnose-prot 92.3 5.9 0.00013 38.8 14.8 141 251-400 6-156 (344)
99 KOG1580 UDP-galactose transpor 90.9 0.33 7.3E-06 44.5 4.4 73 170-242 239-311 (337)
100 COG4975 GlcU Putative glucose 89.5 0.12 2.7E-06 47.7 0.4 132 253-400 3-139 (288)
101 PF04342 DUF486: Protein of un 88.5 2.8 6.1E-05 33.5 7.3 31 364-394 75-105 (108)
102 KOG1444 Nucleotide-sugar trans 86.5 22 0.00048 34.4 13.5 131 253-396 13-148 (314)
103 KOG4314 Predicted carbohydrate 85.7 0.41 8.8E-06 42.8 1.4 62 338-399 66-127 (290)
104 COG3169 Uncharacterized protei 84.3 15 0.00033 28.9 9.2 31 364-394 82-112 (116)
105 COG5070 VRG4 Nucleotide-sugar 83.0 28 0.00061 32.1 11.8 74 168-241 220-293 (309)
106 KOG1582 UDP-galactose transpor 79.2 16 0.00035 34.6 9.2 121 126-246 207-334 (367)
107 PF07168 Ureide_permease: Urei 77.8 1.8 3.9E-05 41.4 2.7 137 258-396 2-145 (336)
108 KOG1583 UDP-N-acetylglucosamin 75.6 21 0.00045 34.0 8.8 138 107-244 162-314 (330)
109 KOG2922 Uncharacterized conser 75.4 1.9 4.2E-05 41.6 2.2 119 248-396 17-135 (335)
110 KOG3912 Predicted integral mem 66.5 15 0.00033 35.0 5.9 55 342-396 103-157 (372)
111 PF06379 RhaT: L-rhamnose-prot 65.1 1.5E+02 0.0032 29.3 26.9 224 168-396 69-339 (344)
112 COG5373 Predicted membrane pro 64.4 2.3E+02 0.005 31.3 20.5 27 191-217 219-245 (931)
113 PRK02237 hypothetical protein; 64.2 12 0.00026 30.2 4.1 39 207-245 68-106 (109)
114 PRK02237 hypothetical protein; 63.8 13 0.00027 30.1 4.1 44 354-397 62-105 (109)
115 PF02694 UPF0060: Uncharacteri 61.1 13 0.00028 29.9 3.8 39 207-245 66-104 (107)
116 KOG2766 Predicted membrane pro 61.1 2.3 5.1E-05 39.7 -0.4 66 332-397 85-150 (336)
117 KOG4831 Unnamed protein [Funct 59.1 15 0.00032 29.5 3.7 70 172-242 53-123 (125)
118 PF02694 UPF0060: Uncharacteri 58.9 13 0.00029 29.9 3.5 44 354-397 60-103 (107)
119 KOG1443 Predicted integral mem 58.8 1.8E+02 0.0039 28.3 13.0 50 193-242 264-313 (349)
120 PF05977 MFS_3: Transmembrane 55.9 2.7E+02 0.0058 29.3 17.3 27 346-372 341-367 (524)
121 PF05884 ZYG-11_interact: Inte 55.7 2E+02 0.0043 27.8 17.3 119 107-233 102-224 (299)
122 PRK10263 DNA translocase FtsK; 53.9 4.3E+02 0.0094 31.1 15.5 17 183-199 34-50 (1355)
123 COG2271 UhpC Sugar phosphate p 53.6 1.4E+02 0.003 30.6 10.5 124 260-401 73-209 (448)
124 PF05545 FixQ: Cbb3-type cytoc 52.9 20 0.00044 24.4 3.3 27 383-409 16-42 (49)
125 PF05961 Chordopox_A13L: Chord 48.7 16 0.00035 26.6 2.3 23 380-402 5-27 (68)
126 PRK10655 potE putrescine trans 47.4 3.2E+02 0.0069 27.7 18.6 25 380-404 409-433 (438)
127 COG1742 Uncharacterized conser 45.7 26 0.00057 28.0 3.2 38 208-245 68-105 (109)
128 PHA03049 IMV membrane protein; 45.2 18 0.00038 26.3 2.0 24 380-403 5-28 (68)
129 PF11044 TMEMspv1-c74-12: Plec 43.2 56 0.0012 21.7 3.9 11 390-400 21-31 (49)
130 TIGR00910 2A0307_GadC glutamat 43.1 4.1E+02 0.0089 27.7 16.5 17 279-295 330-346 (507)
131 PF05297 Herpes_LMP1: Herpesvi 41.2 8.9 0.00019 36.3 0.0 63 196-258 47-113 (381)
132 PF04342 DUF486: Protein of un 41.1 1.9E+02 0.0041 23.3 9.3 34 209-242 73-106 (108)
133 KOG1442 GDP-fucose transporter 39.1 75 0.0016 30.4 5.7 131 113-243 188-326 (347)
134 PRK06638 NADH:ubiquinone oxido 38.3 3E+02 0.0065 24.8 11.8 34 367-400 134-167 (198)
135 PF07444 Ycf66_N: Ycf66 protei 35.7 51 0.0011 25.4 3.4 25 376-400 4-28 (84)
136 PRK13108 prolipoprotein diacyl 35.1 5.3E+02 0.011 26.7 20.9 23 377-399 254-276 (460)
137 COG5336 Uncharacterized protei 34.3 2.3E+02 0.0049 23.0 6.8 39 362-400 56-95 (116)
138 TIGR02185 Trep_Strep conserved 32.9 3.6E+02 0.0078 24.1 15.1 40 207-246 37-79 (189)
139 PF13038 DUF3899: Domain of un 32.8 58 0.0012 25.3 3.4 17 379-395 4-20 (92)
140 cd01324 cbb3_Oxidase_CcoQ Cyto 32.2 47 0.001 22.6 2.4 25 384-408 18-42 (48)
141 TIGR02865 spore_II_E stage II 32.1 7.4E+02 0.016 27.5 16.3 45 199-243 11-55 (764)
142 PF06570 DUF1129: Protein of u 30.8 4E+02 0.0087 24.0 11.4 54 221-274 141-201 (206)
143 COG4736 CcoQ Cbb3-type cytochr 30.8 71 0.0015 22.9 3.2 29 382-410 15-43 (60)
144 COG4657 RnfA Predicted NADH:ub 30.3 1.6E+02 0.0035 25.7 5.8 58 217-274 90-154 (193)
145 COG2211 MelB Na+/melibiose sym 29.2 6.7E+02 0.014 26.0 22.8 70 206-275 281-352 (467)
146 PF04246 RseC_MucC: Positive r 28.2 1.6E+02 0.0035 24.5 5.7 17 354-370 70-86 (135)
147 COG3086 RseC Positive regulato 28.0 2.6E+02 0.0056 24.0 6.6 29 349-377 72-105 (150)
148 COG2215 ABC-type uncharacteriz 27.9 2.5E+02 0.0055 27.1 7.3 18 372-389 125-142 (303)
149 COG4858 Uncharacterized membra 27.6 4.5E+02 0.0099 23.6 9.4 55 221-275 156-217 (226)
150 PF08627 CRT-like: CRT-like; 26.9 1.5E+02 0.0033 24.7 4.9 39 107-145 55-94 (130)
151 COG4147 DhlC Predicted symport 26.3 3.4E+02 0.0075 28.2 8.3 65 341-405 438-514 (529)
152 KOG1289 Amino acid transporter 24.6 7.2E+02 0.016 26.3 10.4 50 349-398 446-509 (550)
153 PF12868 DUF3824: Domain of un 24.5 1.6E+02 0.0034 25.1 4.8 13 381-393 8-20 (137)
154 PRK02935 hypothetical protein; 24.5 2.7E+02 0.006 22.4 5.8 24 377-400 40-63 (110)
155 TIGR00905 2A0302 transporter, 24.3 7.8E+02 0.017 25.2 17.5 22 380-401 417-438 (473)
156 PF07857 DUF1632: CEO family ( 24.1 6.1E+02 0.013 23.9 13.3 101 137-243 26-133 (254)
157 KOG3762 Predicted transporter 23.5 1.1E+02 0.0024 32.4 4.3 30 257-286 409-441 (618)
158 COG1575 MenA 1,4-dihydroxy-2-n 23.5 6.9E+02 0.015 24.3 14.0 45 226-270 18-62 (303)
159 KOG4812 Golgi-associated prote 22.8 3.3E+02 0.0073 25.4 6.8 18 377-394 219-236 (262)
160 COG0387 ChaA Ca2+/H+ antiporte 20.9 8.5E+02 0.018 24.4 17.6 20 375-394 161-180 (368)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.1e-39 Score=317.09 Aligned_cols=293 Identities=61% Similarity=0.998 Sum_probs=249.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014279 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (427)
Q Consensus 109 ~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 188 (427)
+..+.+++||++|.+.+++||++++++++|++++++|+.++.+++.+.+..+.+++.+.++++++.+++.|+++.+++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999887766654444455567889999999999999999999
Q ss_pred hhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHHHHHHHHH
Q 014279 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRS 268 (427)
Q Consensus 189 ~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l~~a~~~ 268 (427)
.|++++|+++++++++++++|+++++++++++|||++++++++++++++|+++...++.+++..|++++++++++|++++
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777788889999999999999999
Q ss_pred HHHHHhhc--CCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHH-HHHHHHHHHHHH
Q 014279 269 IYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM-FYHLYNQLATNT 345 (427)
Q Consensus 269 v~~kk~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv-~~~~~~~~~~~~ 345 (427)
++.||..+ ++|+.+++.|++.++.+.++|+....|++......+.+..........+...+..+. +.+.+|...+..
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988 899999999999999999999988777544322211111000111122332333333 455666788889
Q ss_pred hhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014279 346 LERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (427)
Q Consensus 346 l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~ 401 (427)
+++++|.++++.++++|++++++|++++||++|+.+++|.+++++|+.+|++.|++
T Consensus 242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999976543
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=7.5e-39 Score=316.46 Aligned_cols=292 Identities=36% Similarity=0.625 Sum_probs=252.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHHHHH
Q 014279 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI--DSKLLKLLIPVAVCHA 183 (427)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 183 (427)
..++...+++.||++|+..++.||++++++++|++++++|++++.+++.+++..+.++.++. .++.++.+++.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999887776665554443434 3458899999999999
Q ss_pred HHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHHHH
Q 014279 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIS 263 (427)
Q Consensus 184 l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l~ 263 (427)
..+...+.|++++++++++++++++|+++++++++++|||++++++++++++++|+++.+.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHhhcC-------CChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchh---hhhhhchHHHHHHHHHHHH
Q 014279 264 FTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSD---AISKVGMVKFISDLFWVGM 333 (427)
Q Consensus 264 ~a~~~v~~kk~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~gv 333 (427)
+++++++.||.+++ +++.++..++.+++.++++|+....|++.... .+.+ .........++..++.+++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHH
Confidence 99999999998864 45667888889999999999988777543211 1100 0011122234445677899
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHH
Q 014279 334 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
+++++|...|..+++++|+++++.+++||++++++|+++|||++|+.+++|.+++++|+++|++.
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999875
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-38 Score=298.88 Aligned_cols=293 Identities=38% Similarity=0.552 Sum_probs=261.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHc--cCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHH
Q 014279 106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI-DSKLLKLLIPVAVCH 182 (427)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~--~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 182 (427)
+.+....++..||++|++.+++||++++ +|++|++++.+|+.++.+...+.+..+..+..+. ++..++.+++.|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 4667888899999999999999999999 8999999999999999998888887777665554 556899999999999
Q ss_pred HHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHHH
Q 014279 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 262 (427)
Q Consensus 183 ~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l 262 (427)
.+++++.|.|+.+++++++|++|+++|++++++++++.+|+++...+++++.++.||.+.+.+|.++|+.|++.++++.+
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc----CCChhhHHHHHHHHHHHHHH-HHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHH
Q 014279 263 SFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL 337 (427)
Q Consensus 263 ~~a~~~v~~kk~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~ 337 (427)
..++++++.|+.++ ++|+++++.|+.+++.+.++ |+....|+... . .+.. ...... .+..++ ..+++++
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~--~~~~~~-~~~~~~-~sv~~f~ 247 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLT--APWFVT-FLILLL-NSVLAFL 247 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeec--cccchh-hHHHHH-HHHHHHH
Confidence 99999999999884 48999999999999999999 87777776554 1 1111 112222 333333 3499999
Q ss_pred HHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhH
Q 014279 338 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE 404 (427)
Q Consensus 338 ~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~~ 404 (427)
+|+..|.+++++||+++++.+.+|.++.++.|+++|++++|+.|..|+++.++|+.+|++.|.++++
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999998876654
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=3.1e-28 Score=240.17 Aligned_cols=286 Identities=13% Similarity=0.086 Sum_probs=219.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHh-CC-CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014279 111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GL-PKRAPIDSKLLKLLIPVAVCHALGHVT 188 (427)
Q Consensus 111 ~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l 188 (427)
...++.--....+...+.|..++.--.|+.+.++|+.++++++.++... ++ ++.++.+++.+..+...|+++.+.+.+
T Consensus 15 ~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~ 94 (358)
T PLN00411 15 LTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVIT 94 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3444444556678888889999876568999999999998887765432 22 222333566778888888888667779
Q ss_pred hhhhhcccchhHHHHHHhhhHHHHHHHHHHH------hCcccChhhHHHHHHHHhhhhhhccC-Cc--------------
Q 014279 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFI------LGQQLPLTLWLSLAPVVIGVSMASLT-EL-------------- 247 (427)
Q Consensus 189 ~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~------l~er~~~~~~l~l~l~~~Gv~l~~~~-~~-------------- 247 (427)
.+++++|++++.+.++.++.|++++++++++ ++||+++++++|++++++|+.++... +.
T Consensus 95 ~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~ 174 (358)
T PLN00411 95 GYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFR 174 (358)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccc
Confidence 9999999999999999999999999999999 69999999999999999999986531 10
Q ss_pred ---------cch-HHHHHHHHHHHHHHHHHHHHHHHhhcCCChh-hHHHHHHHHHHHHHHHHHHHhccchhhhccchhhh
Q 014279 248 ---------SFN-WTGFISAMISNISFTYRSIYSKKAMTDMDST-NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAI 316 (427)
Q Consensus 248 ---------~~~-~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
..+ ..|.+++++++++|+++++++||..+++++. ...+++..++.+.+.++....+...... |.
T Consensus 175 ~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~--~~--- 249 (358)
T PLN00411 175 QLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV--WI--- 249 (358)
T ss_pred ccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc--ce---
Confidence 112 4599999999999999999999998888664 5566777777777776666655322110 10
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 317 SKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 317 ~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
...+. ..+ .++..+++..+...++++++++.+|...++..++.|++++++|++++||++++.+++|++++++|+++.+
T Consensus 250 ~~~~~-~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 250 IHFDI-TLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred eccch-HHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 01111 112 2333444444445577789999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhh
Q 014279 397 YIKAQME 403 (427)
Q Consensus 397 ~~~~~~~ 403 (427)
+.+++|.
T Consensus 328 ~~~~~~~ 334 (358)
T PLN00411 328 WGKANEE 334 (358)
T ss_pred hhhhhhh
Confidence 7666553
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=2e-28 Score=238.06 Aligned_cols=283 Identities=17% Similarity=0.249 Sum_probs=233.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcc--CC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 014279 114 FFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (427)
Q Consensus 114 ~~~w~~~~~~~~~~~K~~~~~--f~-~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 190 (427)
+...++......++++++.+. .. +|+++++.|+++..+...+...... ..+.++..++.+++.++++.+++.++|
T Consensus 5 ~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
T PF08449_consen 5 VAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSN 82 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHH
Confidence 344445555666888888876 22 6999999999999887776554333 223345567888999999999999999
Q ss_pred hhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc----cc------hHHHHHHHHHH
Q 014279 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----SF------NWTGFISAMIS 260 (427)
Q Consensus 191 ~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~----~~------~~~G~~l~l~a 260 (427)
.|++|+|+++.+++|++.|+++++++++++|||++.+++++++++++|++++..+|. .. ...|+++.+++
T Consensus 83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s 162 (303)
T PF08449_consen 83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS 162 (303)
T ss_pred HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999876542 11 12399999999
Q ss_pred HHHHHHHHHHHHHhhc--CCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHH
Q 014279 261 NISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLY 338 (427)
Q Consensus 261 ~l~~a~~~v~~kk~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~ 338 (427)
.++++++.+++||..+ +.++.++++|.+.++++..++....++..+... .+. -....+..+..++..+++++.+
T Consensus 163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~-~~~---f~~~~p~~~~~l~~~s~~~~~g 238 (303)
T PF08449_consen 163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRS-AIR---FISAHPSVLLYLLLFSLTGALG 238 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhH-HHH---HHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 467889999999999999988777732111110 010 1223445677888889999999
Q ss_pred HHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHh
Q 014279 339 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 402 (427)
Q Consensus 339 ~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~ 402 (427)
+...+.++++.+|++.+++.++|+++++++|+++||+++++.+|+|.+++++|..+|++.|+|+
T Consensus 239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 9988999999999999999999999999999999999999999999999999999999987654
No 6
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=7e-28 Score=221.82 Aligned_cols=288 Identities=20% Similarity=0.289 Sum_probs=246.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHH-hCCCC---CCCC-CHHHHHHHHHHHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGLPK---RAPI-DSKLLKLLIPVAVC 181 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~-~~~~~---~~~~-~~~~~~~~~~~~~~ 181 (427)
+...+.+++.||++|++..+++|+...+|++|++++.+|+++-.++...... ...+. +... .++.+++..|.+++
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 4556667799999999999999999999999999999999888877654432 22111 1223 34578889999999
Q ss_pred HHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHH
Q 014279 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 261 (427)
Q Consensus 182 ~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~ 261 (427)
.++..++.|+|++|++++.+++.|+..++|+.+++.++.-||+++.-.+.+.++.+|+.+.+..+.++|..|++++++++
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS 173 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS 173 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence 99999999999999999999999999999999999988889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcC-----CChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhc---hHHHHHHHHHHHH
Q 014279 262 ISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG---MVKFISDLFWVGM 333 (427)
Q Consensus 262 l~~a~~~v~~kk~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~gv 333 (427)
++.+++..+.++++.+ -+|+.++++..+...+.++|..+.+|++..... ...+...+ .......+.+.|.
T Consensus 174 ~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~--s~~f~~~d~~~~~rv~g~i~l~g~ 251 (349)
T KOG1443|consen 174 LLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITS--SSIFRFQDTGLILRVIGLISLGGL 251 (349)
T ss_pred HhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchh--hhHHHhcCccHHHHHHHHHHHHHH
Confidence 9999999999888854 468899999999999999999999999876422 11111122 2233345566688
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 334 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
.+++.-...|..+.+++.++.++++..|.+.+.+++.++.+|.++..+|.|..+.+.|+.+|.
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 888888899999999999999999999999999999999999999999999999999999983
No 7
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=9.4e-27 Score=217.60 Aligned_cols=292 Identities=17% Similarity=0.233 Sum_probs=255.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCChHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014279 111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (427)
Q Consensus 111 ~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 188 (427)
....+.+..+|+.+.++||++++.+++|..+.. .|.+.+.+.+.++...+.-+.++++++..|.++|..+++.+....
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 455567777788899999999999999966666 999999998888777777777888999999999999999999999
Q ss_pred hhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHHHHHHHHH
Q 014279 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRS 268 (427)
Q Consensus 189 ~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l~~a~~~ 268 (427)
+..+++|++++.++++|...|+++++.+.+++|+|++...|.++....+|.......|.++|..|+.|++.+.++.+.+.
T Consensus 94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~ 173 (314)
T KOG1444|consen 94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV 173 (314)
T ss_pred ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh--cCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014279 269 IYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTL 346 (427)
Q Consensus 269 v~~kk~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l 346 (427)
++.|+.. .+.+.+.+++|.++++++.+....++.++.. . .....+.+....++..+.++|+++++.++..+++.
T Consensus 174 v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~--~--l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct 249 (314)
T KOG1444|consen 174 VYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD--A--LSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCT 249 (314)
T ss_pred HHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH--H--HHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999877 4577889999999999999988888876544 1 11111233345677889999999999999999999
Q ss_pred hccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhHHh
Q 014279 347 ERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEK 406 (427)
Q Consensus 347 ~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~~~~ 406 (427)
+..|+++.++++..+...+.+...+++|++.++..++|..+-+.|..+|++.+.++++.+
T Consensus 250 ~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 250 RVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred hhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 999999999999666666667777777889999999999999999999999887655433
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=8.6e-26 Score=218.79 Aligned_cols=268 Identities=12% Similarity=0.089 Sum_probs=199.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGH 186 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 186 (427)
.+.....+++| .+.....|...++++ |..+.++|+.++.+++.+.. .+++ .+++.++.++..++.+..++
T Consensus 6 ~l~~l~a~~~W----g~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~ 75 (295)
T PRK11689 6 TLIGLIAILLW----STMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPR---LRQFPKRYLLAGGLLFVSYE 75 (295)
T ss_pred hHHHHHHHHHH----HHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccc---cccccHHHHHHHhHHHHHHH
Confidence 44566677777 555578899999887 99999999999988766442 2222 12223344455555555677
Q ss_pred HHhhhhhc----ccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc-----------cchH
Q 014279 187 VTSNVSFA----AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----------SFNW 251 (427)
Q Consensus 187 ~l~~~al~----~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~-----------~~~~ 251 (427)
.+.+.+++ +++++.+.++.++.|+++++++++++|||++++++++++++++|++++..++. +.+.
T Consensus 76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK11689 76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNP 155 (295)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccCh
Confidence 77777775 46778889999999999999999999999999999999999999998875432 1235
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHH
Q 014279 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (427)
Q Consensus 252 ~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (427)
.|+++++++++|||.++++.||..++.++..... ..+.+.+.+.....+.+.. .... ..|..+++.
T Consensus 156 ~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~----------~~~~-~~~~~l~~~ 221 (295)
T PRK11689 156 LSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAM----------VFSL-PAIIKLLLA 221 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccc----------cCCH-HHHHHHHHH
Confidence 6999999999999999999999988888765422 2233333333333221110 1111 223344455
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHH
Q 014279 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 332 gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
++...+.++++++++++.++...++..+++|+++++++++++||++++.+++|+++++.|+.+....
T Consensus 222 ~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 222 AAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 5555556667889999999999999999999999999999999999999999999999999876543
No 9
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=6.1e-25 Score=212.58 Aligned_cols=271 Identities=15% Similarity=0.112 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHhhhhh
Q 014279 115 FMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSF 193 (427)
Q Consensus 115 ~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~al 193 (427)
++-.+.+.+.....|...++.+ |..++++|++++.+++++....++.+ ..++++++.....|.+. ..++.+.+++.
T Consensus 14 ~~~~~iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 90 (292)
T PRK11272 14 FALYIIWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAE 90 (292)
T ss_pred HHHHHHHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344666678899888776 99999999999988776654433222 23466677777777765 46778889998
Q ss_pred -cccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC-CccchHHHHHHHHHHHHHHHHHHHHH
Q 014279 194 -AAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISFTYRSIYS 271 (427)
Q Consensus 194 -~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~-~~~~~~~G~~l~l~a~l~~a~~~v~~ 271 (427)
++++++.+.++.++.|+++++++++ +|||++++++++++++++|+.+...+ +.+.+..|++++++++++||.+.++.
T Consensus 91 ~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~ 169 (292)
T PRK11272 91 HQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWS 169 (292)
T ss_pred HccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986 69999999999999999999988644 33456789999999999999999999
Q ss_pred HHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHH-HHHHHHHHHhhccC
Q 014279 272 KKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYH-LYNQLATNTLERVA 350 (427)
Q Consensus 272 kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-~~~~~~~~~l~~~s 350 (427)
||..++ ++.....++..++.+.+.+.....+.+.... .....|..+++.++++. ......++++++.+
T Consensus 170 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~ 238 (292)
T PRK11272 170 SRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTAL----------PTLSGFLALGYLAVFGSIIAISAYMYLLRNVR 238 (292)
T ss_pred HhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCccccc----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 997543 4556677888888888877665443221100 01122444444455443 34446678999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 351 PLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 351 a~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
+.+.++..+++|+++++++++++||++++.+++|+++++.|+.+.+..++
T Consensus 239 ~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 239 PALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998765433
No 10
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.4e-25 Score=206.88 Aligned_cols=287 Identities=15% Similarity=0.148 Sum_probs=244.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHcc--------CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 014279 106 PALVTGFFFFMWYFLNVIFNILNKRIYNY--------FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIP 177 (427)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~~--------f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~ 177 (427)
..+.+++++...|...+.+.++++.+.+. |.+|.++.+.|-+++.++...+... .+.....++.|+.+..
T Consensus 11 ~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~--~k~~~~~~apl~~y~~ 88 (327)
T KOG1581|consen 11 KIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKW--WKKELSGVAPLYKYSL 88 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhc--ccccCCCCCchhHHhH
Confidence 35677777788888889999999988774 7899999999999988877554422 2333445567888889
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc---------c
Q 014279 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------S 248 (427)
Q Consensus 178 ~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~---------~ 248 (427)
.++...+...+.+.||+|++.++..+.|++..+.+++.+.++.++|++..+++..+++.+|+.++...+. .
T Consensus 89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ 168 (327)
T KOG1581|consen 89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRE 168 (327)
T ss_pred HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998865321 2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhc--CCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhh-hhchHHHH
Q 014279 249 FNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS-KVGMVKFI 325 (427)
Q Consensus 249 ~~~~G~~l~l~a~l~~a~~~v~~kk~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 325 (427)
++++|+.++..+.+++++.+..++++.+ ++++++++++.++++++......+ ..+ . +.+.++ ...++.++
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li-~qg-~-----~~~av~F~~~hp~~~ 241 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI-LQG-H-----LLPAVSFIKEHPDVA 241 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh-cCC-C-----CchHHHHHHcChhHH
Confidence 4589999999999999999999999985 478999999999999998876522 222 1 111111 23456788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014279 326 SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (427)
Q Consensus 326 ~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~ 401 (427)
.++++.+.++.+.|.+.|..+++.++++..+.+++|+++++++|.++||+++++.||+|..++++|+.+-.+.|++
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999999999999999999998877766
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.94 E-value=1.8e-24 Score=209.43 Aligned_cols=255 Identities=13% Similarity=0.087 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~ 201 (427)
.......|+.+++++ |..+.++|++++.+++.+....++ .+.++++++..+..|++....+.+.++++++++++.+
T Consensus 25 ~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a 100 (293)
T PRK10532 25 QSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIA 100 (293)
T ss_pred HhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 455567899998877 999999999999887765542211 2345677778888888888888999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC--C-ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014279 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNISFTYRSIYSKKAMTDM 278 (427)
Q Consensus 202 ~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~--~-~~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~ 278 (427)
.++..+.|+++.+++ +|++.. ..++.++++|+.++... + .+.+..|++++++++++|+.+.++.||..++.
T Consensus 101 ~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~ 174 (293)
T PRK10532 101 VALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEH 174 (293)
T ss_pred HHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999887 366544 45567789999876532 2 23467899999999999999999999998888
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHH-HHHHHhhccChhHHHHH
Q 014279 279 DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ-LATNTLERVAPLTHAVG 357 (427)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~-~~~~~l~~~sa~~~sv~ 357 (427)
++... .++..++.+.+.|+....+.... .+ ...|..++..|++.....+ ..++.+++.++.+.++.
T Consensus 175 ~~~~~-~~~~~~~~~~l~~~~~~~~~~~~-----------~~-~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~ 241 (293)
T PRK10532 175 GPATV-AIGSLIAALIFVPIGALQAGEAL-----------WH-WSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTL 241 (293)
T ss_pred CchHH-HHHHHHHHHHHHHHHHHccCccc-----------CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHH
Confidence 88765 56667777777776654332100 01 1123333345555544444 66789999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 014279 358 NVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 358 ~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
.+++|+++++++++++||++++.+++|++++++|+..+....
T Consensus 242 ~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 242 MSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999987543
No 12
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=2.9e-25 Score=214.88 Aligned_cols=273 Identities=13% Similarity=0.142 Sum_probs=215.9
Q ss_pred HHHHHHHcc-CCChHHHHHHHHHHHHHHHHHHHHhCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 014279 126 ILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLP--KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (427)
Q Consensus 126 ~~~K~~~~~-f~~P~~l~~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ 202 (427)
..+..+-++ ++.|.+-+++-++.-.++.......+.. +.....++.++++++.+++...++++.+.|++|++++.++
T Consensus 30 ~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~ 109 (334)
T PF06027_consen 30 TFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQ 109 (334)
T ss_pred HHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHH
Confidence 444444443 6679888888876655443333222221 1222234566677778999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc---------cchHHHHHHHHHHHHHHHHHHHHHHH
Q 014279 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNISFTYRSIYSKK 273 (427)
Q Consensus 203 ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~---------~~~~~G~~l~l~a~l~~a~~~v~~kk 273 (427)
++.++..+++++++++++|+|+++.+++|++++++|+.+....|. +....|++++++++++||++++++|+
T Consensus 110 lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~ 189 (334)
T PF06027_consen 110 LLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEK 189 (334)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998766442 23478999999999999999999999
Q ss_pred hhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhH
Q 014279 274 AMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLT 353 (427)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~ 353 (427)
..++.+..+.+.+..+++.++..+...++|..++....|. . ..+..++..+++.+......-..++..+|+.
T Consensus 190 ~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~-------~-~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~ 261 (334)
T PF06027_consen 190 LVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT-------S-QVIGLLVGYALCLFLFYSLVPIVLRMSSATF 261 (334)
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC-------h-hhHHHHHHHHHHHHHHHHHHHHHHHhCccce
Confidence 9999999999999999999999988888887665433222 1 2233344445554555555556789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhHHh
Q 014279 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEK 406 (427)
Q Consensus 354 ~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~~~~ 406 (427)
.++...+..+.++++++++||++++|..++|.++++.|+.+|+...+++++++
T Consensus 262 ~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~ 314 (334)
T PF06027_consen 262 FNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR 314 (334)
T ss_pred eehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence 99999999999999999999999999999999999999999998766554433
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.94 E-value=2.4e-24 Score=209.06 Aligned_cols=275 Identities=15% Similarity=0.259 Sum_probs=199.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHH
Q 014279 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGH 186 (427)
Q Consensus 108 l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~ 186 (427)
+......++| .+.....|..+++++ |..+.++|+.++++.+.+.. .+++ .+ ++..+..+++.. ...
T Consensus 7 l~~l~~~~~W----g~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~--~~~~---~~---~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 7 VLALLVVVVW----GLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV--ARPK---VP---LNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHH----hhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh--cCCC---Cc---hHHHHHHHHHHHHHHH
Confidence 4455566677 555577799888876 99999999998776554433 1122 12 233444455433 444
Q ss_pred HHhhhhhcc-cchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC---ccchHHHHHHHHHHHH
Q 014279 187 VTSNVSFAA-VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNI 262 (427)
Q Consensus 187 ~l~~~al~~-~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~---~~~~~~G~~l~l~a~l 262 (427)
.+.+.++++ ++++.+.++.++.|+++.+++++++|||++++++++++++++|+.++...+ .+.++.|+++++++++
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal 153 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF 153 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence 567788887 688999999999999999999999999999999999999999999887532 2345679999999999
Q ss_pred HHHHHHHHHHHhhcCCChh---hHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHH
Q 014279 263 SFTYRSIYSKKAMTDMDST---NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN 339 (427)
Q Consensus 263 ~~a~~~v~~kk~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~ 339 (427)
+|+.+.+++||..++.++. ....++...+.+.+.......|++......+ ...+ ...|..+++.+++.....
T Consensus 154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~l~~l~i~~t~~~ 228 (299)
T PRK11453 154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL----VTID-MTTILSLMYLAFVATIVG 228 (299)
T ss_pred HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh----ccCC-HHHHHHHHHHHHHHHHHH
Confidence 9999999999986554433 3344455554444443334444432111000 0111 233555666666665555
Q ss_pred H-HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 340 Q-LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 340 ~-~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
+ .+++.+++.++.+.++..+++|+++++++++++||++++.+++|.++++.|+++..+.++
T Consensus 229 ~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 229 YGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 4 566889999999999999999999999999999999999999999999999988665443
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.94 E-value=3e-24 Score=204.04 Aligned_cols=252 Identities=16% Similarity=0.172 Sum_probs=201.3
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHhhhhhcccchhHH
Q 014279 123 IFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAV-CHALGHVTSNVSFAAVAVSFT 201 (427)
Q Consensus 123 ~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~al~~~~~s~~ 201 (427)
...+..|+.+++...|..+.+.|++++.+++.+....+ .++++++..+..+. +..+++.+.++|+++++++.+
T Consensus 3 ~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~ 76 (260)
T TIGR00950 3 TTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA 76 (260)
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence 34467799888766689999999999888776654332 23444445555554 567888999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC-ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh
Q 014279 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDS 280 (427)
Q Consensus 202 ~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~-~~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~ 280 (427)
.++.++.|+++++++.+++|||++++++.+++++++|+.++..++ .+.+..|++++++++++|+.++++.||..++.++
T Consensus 77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~ 156 (260)
T TIGR00950 77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP 156 (260)
T ss_pred HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCc
Confidence 999999999999999999999999999999999999999876543 4556789999999999999999999999888775
Q ss_pred h--hHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHHHH
Q 014279 281 T--NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYH-LYNQLATNTLERVAPLTHAVG 357 (427)
Q Consensus 281 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-~~~~~~~~~l~~~sa~~~sv~ 357 (427)
. ....+.+.++.+.+.|.....+.+... ....|..++..++++. ..+...++++++.++.+.++.
T Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~ 224 (260)
T TIGR00950 157 ELLQFTGWVLLLGALLLLPFAWFLGPNPQA------------LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASIL 224 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCCc------------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 4 455567888888888776654422110 1122444444555543 444567789999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHH
Q 014279 358 NVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGV 392 (427)
Q Consensus 358 ~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv 392 (427)
.+++|+++++++++++||++++.+++|.++++.|+
T Consensus 225 ~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 225 ALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999986
No 15
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=3.9e-27 Score=213.38 Aligned_cols=294 Identities=18% Similarity=0.298 Sum_probs=251.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc----CCChHHHHHHHHHHHHHHHHHHHH--hC------CCCCCCCCHHHHHHHHH
Q 014279 110 TGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVSWA--VG------LPKRAPIDSKLLKLLIP 177 (427)
Q Consensus 110 ~~~~~~~w~~~~~~~~~~~K~~~~~----f~~P~~l~~~r~~~~~l~l~~~~~--~~------~~~~~~~~~~~~~~~~~ 177 (427)
.......++.++++..+.||+++.. .+.|.++++.|+++...+|..+-. .+ .++. +++-+..+.+.+
T Consensus 29 v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~-~ldl~t~r~vlp 107 (347)
T KOG1442|consen 29 VDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSL-QLDLATARQVLP 107 (347)
T ss_pred hhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcc-cccHHHHHhhcc
Confidence 3344555667888999999999985 568999999999999887765422 12 1222 256677889999
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC---ccchHHHH
Q 014279 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGF 254 (427)
Q Consensus 178 ~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~---~~~~~~G~ 254 (427)
.++.+.+++.++|++|+|++++++.+-+++.-+|+++++++++|||-+..-..++.+++.|-.+-..+| ...++.|.
T Consensus 108 lsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gv 187 (347)
T KOG1442|consen 108 LSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGV 187 (347)
T ss_pred hhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999988776 46789999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC--hhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHH
Q 014279 255 ISAMISNISFTYRSIYSKKAMTDMD--STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (427)
Q Consensus 255 ~l~l~a~l~~a~~~v~~kk~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (427)
++++.|+++-|+..++.||....++ -+.+.+|+++.++++.+|...+.++.+-... + ++.....+|..+.++|
T Consensus 188 ifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~-~----~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 188 IFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG-F----PHLPAIKFWILMTLSG 262 (347)
T ss_pred HHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC-c----ccchHHHHHHHHHHHH
Confidence 9999999999999999999886654 4589999999999999998877654322111 0 2444557899999999
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhHHhhhh
Q 014279 333 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRVS 409 (427)
Q Consensus 333 v~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~~~~~~~ 409 (427)
+++|.+++...+-++-+||+++++.++.|.....++++.+++|..+..-|-|-.+++.|..+|.+.|++|.+++.++
T Consensus 263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~ 339 (347)
T KOG1442|consen 263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ 339 (347)
T ss_pred HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876655444
No 16
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.94 E-value=1.8e-23 Score=202.67 Aligned_cols=273 Identities=14% Similarity=0.109 Sum_probs=191.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCC----CCCHHHHHHHHHHHHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA----PIDSKLLKLLIPVAVCH 182 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 182 (427)
.+......++| .......|.. .+.+ |..+.++|+.++.+++.+.....+++.. ..+++.+......++..
T Consensus 10 ~~~~l~a~~~w----g~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (296)
T PRK15430 10 VLLALAAYFIW----GIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLI 83 (296)
T ss_pred HHHHHHHHHHH----HHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 34444445555 4444566875 4566 9999999999998766554432211110 01233333344555666
Q ss_pred HHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHHH
Q 014279 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 262 (427)
Q Consensus 183 ~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l 262 (427)
..++.+.++++++++++.+.++.++.|+++++++++++|||++++++++++++++|+.++...+.+.. .+++++++
T Consensus 84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~ 159 (296)
T PRK15430 84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAF 159 (296)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999998764332222 46788999
Q ss_pred HHHHHHHHHHHhhcCC--ChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHH
Q 014279 263 SFTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (427)
Q Consensus 263 ~~a~~~v~~kk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 340 (427)
+||.+.++.||...+. +......++..++.+...+. .+.+ ... + ..... ..+..++..++.+...+.
T Consensus 160 ~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~--~----~~~~~-~~~~~~~~~g~~t~i~~~ 228 (296)
T PRK15430 160 SFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSS-TSH--M----GQNPM-SLNLLLIAAGIVTTVPLL 228 (296)
T ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCC-ccc--c----cCCcH-HHHHHHHHHHHHHHHHHH
Confidence 9999999999875322 22333344444443332211 1111 000 0 00011 112334444555556666
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
+.++++++.++...++..+++|+++++++++++||++++.+++|+++++.|+.+......
T Consensus 229 ~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~ 288 (296)
T PRK15430 229 CFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI 288 (296)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999999999999999999999999999999999999887665443
No 17
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.8e-25 Score=195.69 Aligned_cols=266 Identities=17% Similarity=0.181 Sum_probs=219.2
Q ss_pred HHHHHHHHHHHcc-----------CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 014279 122 VIFNILNKRIYNY-----------FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (427)
Q Consensus 122 ~~~~~~~K~~~~~-----------f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 190 (427)
....+.++++... |.+...+.++|+.+..++.-++... ++..+.++..-+.+...++-+.++++-.|
T Consensus 26 F~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~i--r~~~~~D~t~~~~YaAcs~sYLlAMVssN 103 (337)
T KOG1580|consen 26 FVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLI--RKKTEIDNTPTKMYAACSASYLLAMVSSN 103 (337)
T ss_pred hhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheee--cccccccCCcchHHHHHHHHHHHHHHhcc
Confidence 3455677776552 6678889999999988876554422 23344555555677888999999999999
Q ss_pred hhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc-------cchHHHHHHHHHHHHH
Q 014279 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMISNIS 263 (427)
Q Consensus 191 ~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~-------~~~~~G~~l~l~a~l~ 263 (427)
.+++++|+++..+-|++.|+.+|++++++.+++++++++++++++++||+++...+. ..-..|-++.+++.-.
T Consensus 104 ~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~m 183 (337)
T KOG1580|consen 104 QALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAM 183 (337)
T ss_pred chhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999987542 1224788999999999
Q ss_pred HHHHHHHHHHhhcCC--ChhhHHHHHHHHHHHHHHHHHHHh-ccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHH
Q 014279 264 FTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIV-EGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (427)
Q Consensus 264 ~a~~~v~~kk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 340 (427)
+++....++|+-..+ +...|+.|+++.+.+.+....++. |.++++.. ...++..|..+.+.++++.+.|.
T Consensus 184 DGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF-------~~RhP~~~~~l~l~ai~s~LGQ~ 256 (337)
T KOG1580|consen 184 DGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYF-------VQRHPYVFWDLTLLAIASCLGQW 256 (337)
T ss_pred cccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHH-------HHhccHHHHHHHHHHHHHHhhhH
Confidence 999999999987554 456899999999998776554444 33333221 23345677888888999999999
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
+.|+.+...+|++.+++++.++.++++.|+++|+++++..||+|..+++.+...=.
T Consensus 257 fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 257 FIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 99999999999999999999999999999999999999999999999999987644
No 18
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.92 E-value=4.3e-26 Score=206.02 Aligned_cols=279 Identities=17% Similarity=0.136 Sum_probs=225.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHH
Q 014279 105 YPALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHAL 184 (427)
Q Consensus 105 ~~~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 184 (427)
++.+.+.+..+. |++|.++.+..|.+.+ .|....-.|+++-++..+++....+.. .--++...+++++.|+.+..
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~-v~gp~g~R~~LiLRg~mG~t 109 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQP-VIGPEGKRKWLILRGFMGFT 109 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeee-eecCCCcEEEEEeehhhhhh
Confidence 344445555555 7777777777776665 699999999888888776654332211 11233445678889999999
Q ss_pred HHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhcc-----CC---------ccch
Q 014279 185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL-----TE---------LSFN 250 (427)
Q Consensus 185 ~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~-----~~---------~~~~ 250 (427)
+..+.|+|++|++.+.+.+|..+.|+|+.+++|.++||++++.+.++..+.+.||+++.- +| .+.+
T Consensus 110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~ 189 (346)
T KOG4510|consen 110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYD 189 (346)
T ss_pred HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999743 11 1335
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHH
Q 014279 251 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFW 330 (427)
Q Consensus 251 ~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 330 (427)
..|.+.++.+.++.+...++.|++.++.|.+..+.|..+++++..+.........++ +.++.+ |+.++.
T Consensus 190 ~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l---------P~cgkd--r~l~~~ 258 (346)
T KOG4510|consen 190 IPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQL---------PHCGKD--RWLFVN 258 (346)
T ss_pred CCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceec---------Cccccc--eEEEEE
Confidence 678999999999999999999999999999999999999999888776665554443 222222 333455
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 014279 331 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 331 ~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
.|++++..|++..+.+++..+...++..+.+.++++++.+++|+|.+|+++|+|+++++.+..+....|
T Consensus 259 lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 259 LGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred ehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999999999988766544
No 19
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.90 E-value=2.3e-21 Score=186.59 Aligned_cols=260 Identities=14% Similarity=0.128 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchh
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s 199 (427)
...+...|+..++ .++. .++++.+..+++.++...+ .++.++.+++.+...+..++....++.+.+.++++.+++
T Consensus 14 a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 90 (281)
T TIGR03340 14 AGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVG 90 (281)
T ss_pred HHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 5667778876665 2232 3556656655555443322 222223344555566666667778999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC-ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014279 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDM 278 (427)
Q Consensus 200 ~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~-~~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~ 278 (427)
....+.++.|+++.+++++++|||+++++++|++++++|+.++...+ ...+..|+.++++++++|+.++++.|+..++.
T Consensus 91 ~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~ 170 (281)
T TIGR03340 91 LVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGV 170 (281)
T ss_pred hhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccch
Confidence 99999999999999999999999999999999999999999876543 23456788899999999999999998876555
Q ss_pred ChhhHHHHHHHHHHHHH-HHHHHH---hccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH
Q 014279 279 DSTNIYAYISIIALFVC-IPPAII---VEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTH 354 (427)
Q Consensus 279 ~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~ 354 (427)
++.....+....+.+.. .|.... .+..... ......+..+...++.....+...++.+++.++...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~ 240 (281)
T TIGR03340 171 PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF----------PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATV 240 (281)
T ss_pred hcccccHHHHHHHHHHHHHHHHHHHHHHhccchh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEE
Confidence 54321111111222211 222221 1111100 001122333444455555566677899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHH
Q 014279 355 AVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 394 (427)
Q Consensus 355 sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~l 394 (427)
+...++.|+++++++++++||++++.+++|+++++.|+.+
T Consensus 241 ~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 241 VALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999875
No 20
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.3e-20 Score=170.81 Aligned_cols=289 Identities=16% Similarity=0.150 Sum_probs=235.9
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHcc--CC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 014279 103 DRYPALVTGFFFFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVA 179 (427)
Q Consensus 103 ~~~~~l~~~~~~~~w~~~~~~~~~~~K~~~~~--f~-~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (427)
++.++.+..+++...++......++++++++. |. +.|.+++.|+.+-..+.++.+.....++.. ..|+.+..++
T Consensus 37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~---iP~rtY~~la 113 (367)
T KOG1582|consen 37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRV---IPWRTYVILA 113 (367)
T ss_pred cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccccee---cchhHhhhhH
Confidence 44556778888888877778888999999986 54 779999999987765544433211122222 2357778888
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC----ccchHHHHH
Q 014279 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTGFI 255 (427)
Q Consensus 180 ~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~----~~~~~~G~~ 255 (427)
++....+.++|-|+.|+++++..+.|+|..+.+++-+.++-|+|+++.++.+..+..+|.++++..| .+||..|+.
T Consensus 114 ~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~ 193 (367)
T KOG1582|consen 114 FLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVM 193 (367)
T ss_pred hhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHH
Confidence 8888999999999999999999999999999999999999999999999999999999999998866 468899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC--CChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHH
Q 014279 256 SAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 333 (427)
Q Consensus 256 l~l~a~l~~a~~~v~~kk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv 333 (427)
+.-+|.+++|+-...++|.++. -+..++++|...++.++++.+..+..+..- +|.- -.......+...++.+.
T Consensus 194 mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~---a~~f--caehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 194 MISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFS---AWTF--CAEHPVRTYGYAFLFSL 268 (367)
T ss_pred HHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchh---hhHH--HHhCcHhHHHHHHHHHH
Confidence 9999999999998899988854 456799999999999998887776543211 1110 01112234566777788
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 014279 334 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
.+++.+.+....++..++.+++.+++.++.+++++|.++|.+++|.+..-|..+++.|+++-.+.|
T Consensus 269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 888888888889999999999999999999999999999999999999999999999999866665
No 21
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.86 E-value=1.3e-18 Score=167.10 Aligned_cols=263 Identities=18% Similarity=0.192 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~ 201 (427)
.......|...++...+....+.|+.++.+........+.....+..+..++..+..++.......+.+.++++++++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (292)
T COG0697 20 GLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVA 99 (292)
T ss_pred HHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHH
Confidence 44445666666653335666677998888773333322211111112223345555566667888999999999999999
Q ss_pred HHHHhhhHHHHHHHHH-HHhCcccChhhHHHHHHHHhhhhhhccCCccc---hHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014279 202 HTIKALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLTELSF---NWTGFISAMISNISFTYRSIYSKKAMTD 277 (427)
Q Consensus 202 ~ii~s~~Pv~~~il~~-l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~---~~~G~~l~l~a~l~~a~~~v~~kk~~~~ 277 (427)
+++.++.|+++.++++ ++++||++++++.++++++.|+.++...+... +..|.++++.++++++++.++.|+.. +
T Consensus 100 ~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~ 178 (292)
T COG0697 100 SLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R 178 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9999999999999997 77799999999999999999999998766543 35899999999999999999999988 7
Q ss_pred CChhhHHH-HHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHH-HHHHHHHHHhhccChhHHH
Q 014279 278 MDSTNIYA-YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYH-LYNQLATNTLERVAPLTHA 355 (427)
Q Consensus 278 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~-~~~~~~~~~l~~~sa~~~s 355 (427)
.++..... ++.... .++.......... .. .....+..+...++++. ..+...++.+++.++...+
T Consensus 179 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 245 (292)
T COG0697 179 LGPVTLALLLQLLLA--LLLLLLFFLSGFG-AP----------ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA 245 (292)
T ss_pred CChHHHHHHHHHHHH--HHHHHHHHhcccc-cc----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 67766666 444412 2221111111111 00 01122444455555555 4666778899999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHH
Q 014279 356 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 356 v~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
+..++.|+.+++++++++||+++..+++|..+++.|+.+.+..
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999987754
No 22
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.85 E-value=1.5e-18 Score=164.81 Aligned_cols=244 Identities=11% Similarity=0.034 Sum_probs=167.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHH-HhCCCC-----CCCCCHH-HHHHHHHHHH
Q 014279 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPK-----RAPIDSK-LLKLLIPVAV 180 (427)
Q Consensus 108 l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~-~~~~~~-----~~~~~~~-~~~~~~~~~~ 180 (427)
+......++| .......|. ..+.+ |..+.++|++++.+++.+.. ..++++ .++.+++ .+..+...++
T Consensus 5 ~~~i~a~~~w----g~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 5 IVSLLASFLF----GYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred HHHHHHHHHH----HHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 3444555566 555567787 44555 99999999999987765443 222211 0111122 2445667777
Q ss_pred HHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHH
Q 014279 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS 260 (427)
Q Consensus 181 ~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a 260 (427)
+...+..+.++++++++++.++++.++.|+++++++++++|||++++++++++++++|+.++..++.+.+ .+++++
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~a 154 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVL 154 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHH
Confidence 7888999999999999999999999999999999999999999999999999999999998754332222 357889
Q ss_pred HHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHH
Q 014279 261 NISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (427)
Q Consensus 261 ~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 340 (427)
++||+.+.++.||..++ +..+.... .....+...+.....+.+... .......|..++..|+++...+.
T Consensus 155 a~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~g~~t~i~~~ 223 (256)
T TIGR00688 155 AFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQTDFATVQ---------QTNPFPIWLLLVLAGLITGTPLL 223 (256)
T ss_pred HHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHHhccCccc---------ccCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999997543 33332221 112212222111111111000 00011124445555666666677
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHh
Q 014279 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILA 372 (427)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~ 372 (427)
+.++.+++.++...++..+++|++++++++++
T Consensus 224 l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 224 AFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999999865
No 23
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.85 E-value=9e-20 Score=161.01 Aligned_cols=282 Identities=15% Similarity=0.189 Sum_probs=235.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcc--CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 014279 112 FFFFMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTS 189 (427)
Q Consensus 112 ~~~~~w~~~~~~~~~~~K~~~~~--f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 189 (427)
...+.+.+.++.+.+.||++++. |+.-+.+.+.|.+++.+.+.+..+.+.-+ .+.++.|.+++.+++....++..
T Consensus 9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~---fR~t~aK~WfpiSfLLv~MIyt~ 85 (309)
T COG5070 9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFLLVVMIYTS 85 (309)
T ss_pred hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh---eehhhhhhhcCHHHHHHHHHHhc
Confidence 34567777888999999999986 66568888999888877766655443322 22455678899999999999999
Q ss_pred hhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc--------cchHHHHHHHHHHH
Q 014279 190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISN 261 (427)
Q Consensus 190 ~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~--------~~~~~G~~l~l~a~ 261 (427)
.-+++|.+++.+++.|.++.+.++....+++|.|.+-....+.++.++.-+...++|. ..| .|.+|+..++
T Consensus 86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nc 164 (309)
T COG5070 86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNC 164 (309)
T ss_pred ccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhh
Confidence 9999999999999999999999999999999999999999999999999999988875 334 5999999999
Q ss_pred HHHHHHHHHHHHhh--cCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHH
Q 014279 262 ISFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN 339 (427)
Q Consensus 262 l~~a~~~v~~kk~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~ 339 (427)
+..+.+-...||.. ++....+.++|.++++.+.++.+.+++|.+.... .. .... ...+..++.+|++.+...
T Consensus 165 lssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n--~a---nnl~-~d~l~am~ISgl~svgiS 238 (309)
T COG5070 165 LSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN--LA---NNLS-VDSLMAMFISGLCSVGIS 238 (309)
T ss_pred HhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch--hh---cCCC-hHHHHHHHHHHHHHhhhh
Confidence 99999988777654 4556778899999999999999999988765421 11 0111 122456777899999999
Q ss_pred HHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014279 340 QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQME 403 (427)
Q Consensus 340 ~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~ 403 (427)
+..-|+++.+++.++++++.+++....+.|.++|||+.+...+....+-+.+-.+|...|.+++
T Consensus 239 y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 239 YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998899998876543
No 24
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.79 E-value=5.7e-17 Score=146.30 Aligned_cols=251 Identities=15% Similarity=0.155 Sum_probs=202.6
Q ss_pred HHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHH
Q 014279 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (427)
Q Consensus 126 ~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~ 205 (427)
-+.|.++..+. |.-+++.|..+++++++..+ +|.+.+.++++++.++..|++....|.++|.+++.+|.+++..+.
T Consensus 29 s~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~---RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiE 104 (292)
T COG5006 29 SFAKSLFPLVG-AAGVTALRLAIAALILLALF---RPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIE 104 (292)
T ss_pred HHHHHHccccC-hhhHHHHHHHHHHHHHHHHh---hHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhh
Confidence 45688887776 89999999999988766554 245556788899999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC---ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh
Q 014279 206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN 282 (427)
Q Consensus 206 s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~---~~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~ 282 (427)
++.|+.+.+++ .+| .++..-+.+.+.|+.+..-.. .+.|..|..+++.+..||+.|.+..||.....+...
T Consensus 105 F~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~ 178 (292)
T COG5006 105 FTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTA 178 (292)
T ss_pred hccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCch
Confidence 99999988765 344 445555666777877665322 467899999999999999999999999987777778
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHH-HHHHHhhccChhHHHHHHHHH
Q 014279 283 IYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ-LATNTLERVAPLTHAVGNVLK 361 (427)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~-~~~~~l~~~sa~~~sv~~~l~ 361 (427)
-+.+-+.++.++.+|+.....++.++. +..+..-+..++++...-| .-..++++.++-++++...++
T Consensus 179 g~a~gm~vAaviv~Pig~~~ag~~l~~------------p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLe 246 (292)
T COG5006 179 GVAVGMLVAALIVLPIGAAQAGPALFS------------PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLE 246 (292)
T ss_pred HHHHHHHHHHHHHhhhhhhhcchhhcC------------hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhh
Confidence 889999999999999987665554432 2233334444566554444 455788999999999999999
Q ss_pred HHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHH
Q 014279 362 RVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 362 ~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
|.++.+.+++++||.+|+.||.|++++++++.-....
T Consensus 247 Pa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt 283 (292)
T COG5006 247 PALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLT 283 (292)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999888754443
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.75 E-value=7.4e-16 Score=148.73 Aligned_cols=261 Identities=17% Similarity=0.197 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014279 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (427)
Q Consensus 110 ~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 188 (427)
..+.+++| .+.....|++. .++.++.+ |..++.+++..+. ..+.++ ...++.+..-+..|++...++.+
T Consensus 6 ~lia~~~w----Gs~g~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~ 75 (290)
T TIGR00776 6 ALIPALFW----GSFVLINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQIN 75 (290)
T ss_pred HHHHHHHH----hhhHHHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhh
Confidence 33445555 45556667765 44433332 6666666554332 222222 12355566667777778899999
Q ss_pred hhhhhcccchhHHHHHHh-hhHHHHHHHHHHHhCcccChhh----HHHHHHHHhhhhhhccCCcc-------ch-HHHHH
Q 014279 189 SNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSMASLTELS-------FN-WTGFI 255 (427)
Q Consensus 189 ~~~al~~~~~s~~~ii~s-~~Pv~~~il~~l~l~er~~~~~----~l~l~l~~~Gv~l~~~~~~~-------~~-~~G~~ 255 (427)
++.+.++++++.+..+.+ +.++++.+++.+++||+.++++ +++++++++|+.+....+.+ .+ ..|++
T Consensus 76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~ 155 (290)
T TIGR00776 76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL 155 (290)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence 999999999999988888 8899999999999999999999 99999999999987643211 33 68999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHH---HHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHH
Q 014279 256 SAMISNISFTYRSIYSKKAMTDMDSTNIYAYISI---IALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (427)
Q Consensus 256 l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (427)
++++++++|+++.+..|+. ++||.+..+.+.. ++.+...+.. .+.... .....+..++ .|
T Consensus 156 ~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~------------~~~~~~~~~~-~G 218 (290)
T TIGR00776 156 LLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH--ILAKPL------------KKYAILLNIL-PG 218 (290)
T ss_pred HHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH--hcccch------------HHHHHHHHHH-HH
Confidence 9999999999999999976 4788877444443 3333332222 110000 1112233333 67
Q ss_pred HHHHHHHHHHHHHhh-ccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhH----HHHHHHHHHHHHHHH
Q 014279 333 MFYHLYNQLATNTLE-RVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTG----IGTVIAIAGVAAYSY 397 (427)
Q Consensus 333 v~~~~~~~~~~~~l~-~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~----iG~~lvl~Gv~ly~~ 397 (427)
++....+.+.+...+ +.++.+.++...++|+.++++++++++|+.++.|+ +|.++++.|+.+...
T Consensus 219 i~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 219 LMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 775444555557788 99999999999999999999999999999999999 999999999987654
No 26
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=4.2e-18 Score=155.23 Aligned_cols=269 Identities=14% Similarity=0.157 Sum_probs=205.7
Q ss_pred HHHHHHHccCC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcc-cchhHHHH
Q 014279 126 ILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTHT 203 (427)
Q Consensus 126 ~~~K~~~~~f~-~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~-~~~s~~~i 203 (427)
+.-+.+.++.| .-..+++.||++.++-.+++.-.-...+++.+ +|.+...-..+...+.++|+++++ ++.+...+
T Consensus 20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiI 96 (330)
T KOG1583|consen 20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHII 96 (330)
T ss_pred HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCc---hhhhheehheeeeeeeeccceeeecccceEEEE
Confidence 44466666555 34899999999888766554311011112233 455556666777889999999998 99999999
Q ss_pred HHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC---Cc--------------cch--HHHHHHHHHHHHHH
Q 014279 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---EL--------------SFN--WTGFISAMISNISF 264 (427)
Q Consensus 204 i~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~---~~--------------~~~--~~G~~l~l~a~l~~ 264 (427)
+++-.++-+|+++++++|+|++.+|+.+++++.+|+++.+.. |. .+- ..|+.+..++.+..
T Consensus 97 fRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~s 176 (330)
T KOG1583|consen 97 FRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLS 176 (330)
T ss_pred EecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987542 11 011 36888889999999
Q ss_pred HHHHHHHHHhhcCC--ChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhh-------hh--hhchHHHHHHHHHHHH
Q 014279 265 TYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDA-------IS--KVGMVKFISDLFWVGM 333 (427)
Q Consensus 265 a~~~v~~kk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~l~~~gv 333 (427)
|.-.++++...+++ ++-+.++|....++++.+.. .. ++.. .|... ++ ....+..|.+++.+.+
T Consensus 177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~----~~-div~-~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L 250 (330)
T KOG1583|consen 177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM----GD-DIVS-HWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL 250 (330)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh----cc-hHHH-HHHHHhcCcceeccccCccccHHHHHHHHHHH
Confidence 99999999888765 57799999999887755432 11 1111 01100 01 1124567888888888
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014279 334 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQME 403 (427)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~ 403 (427)
..+.+--..|.+-.++++++.+++-++++.++.++|+++|++++|++.|+|..+++.|..+|.....+.+
T Consensus 251 ~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~ 320 (330)
T KOG1583|consen 251 TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK 320 (330)
T ss_pred HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 8888877777888999999999999999999999999999999999999999999999999987665443
No 27
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.74 E-value=3.7e-17 Score=155.20 Aligned_cols=223 Identities=18% Similarity=0.231 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc----
Q 014279 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---- 247 (427)
Q Consensus 172 ~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~---- 247 (427)
.+..+..+.+..++++++|.||.+++++..+++.+++-+|+.+++.++.+||+++.+.+++++.++||++++.+|.
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~ 238 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS 238 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc
Confidence 3455566666779999999999999999999999999999999999999999999999999999999999987642
Q ss_pred ----cchHHHHHHHHHHHHHHHHHHHHHHHhhcC----CChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhh
Q 014279 248 ----SFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKV 319 (427)
Q Consensus 248 ----~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
+....|.++++++++.||.|.++.||...+ +|--.+..|..++.++++.|..++++......+.+.
T Consensus 239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP------ 312 (416)
T KOG2765|consen 239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELP------ 312 (416)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCC------
Confidence 334789999999999999999999998744 566677888888888888887776642211111110
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 014279 320 GMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 320 ~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
....+...++.+.+..++--+++.++.-.++|++..+..++...++++...++-|+++|+.+++|.+.|++|.+..++..
T Consensus 313 ~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 313 SSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred CCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 01111122222333344555788899999999999999999999999999999999999999999999999999988765
Q ss_pred H
Q 014279 400 A 400 (427)
Q Consensus 400 ~ 400 (427)
+
T Consensus 393 ~ 393 (416)
T KOG2765|consen 393 E 393 (416)
T ss_pred c
Confidence 4
No 28
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.74 E-value=1.7e-14 Score=133.80 Aligned_cols=277 Identities=14% Similarity=0.133 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCC--C--CCCHHHHHHHHHHHHHHHHHHH
Q 014279 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKR--A--PIDSKLLKLLIPVAVCHALGHV 187 (427)
Q Consensus 112 ~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~l~~~ 187 (427)
++.+.-|+.++..-++.|.+.. .+ +..+...|.+.+..++.......++++ . ..+++.+..+...+++-..+..
T Consensus 10 l~~l~Ay~lwG~lp~y~kll~~-~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~ 87 (293)
T COG2962 10 LLALLAYLLWGLLPLYFKLLEP-LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW 87 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3334444444666667676654 44 799999999988887664432221111 1 1123445556666666677888
Q ss_pred HhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHHHHHHHH
Q 014279 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR 267 (427)
Q Consensus 188 l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l~~a~~ 267 (427)
.+.||.++-.+-.+++-....|++.++++.+++|||+++.|+++++++.+||..-.....+++|..+.+ +++|++|
T Consensus 88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Y 163 (293)
T COG2962 88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLY 163 (293)
T ss_pred HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHH
Confidence 999999999988999999999999999999999999999999999999999999887777788765544 4688889
Q ss_pred HHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014279 268 SIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLE 347 (427)
Q Consensus 268 ~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~ 347 (427)
...-|+. ++|+.+-.+...+.-++..+.+.+..+...-. ...+....+..++..|+....--......-+
T Consensus 164 gl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~--------~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~ 233 (293)
T COG2962 164 GLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQF--------LQQNANSLWLLLVLAGLVTAVPLLLFAAAAK 233 (293)
T ss_pred HHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchh--------hhcCCchHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 8887766 67777766666666656555555544332200 0111223355566667766544444456778
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHHhhH
Q 014279 348 RVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEE 404 (427)
Q Consensus 348 ~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~~ 404 (427)
+.+=.+.++..++.|....++++++|||+++..+++..+++-.|+.+|....-++++
T Consensus 234 ~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r 290 (293)
T COG2962 234 RLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTAR 290 (293)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999987654433
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.73 E-value=1.1e-15 Score=139.77 Aligned_cols=279 Identities=17% Similarity=0.212 Sum_probs=204.5
Q ss_pred HHHH-HHHHHHHcc-------CCChHHHHHHHHHHHHHHHHHHHHhCCCCC-C---C-----CC----HHHHHHHHHHHH
Q 014279 122 VIFN-ILNKRIYNY-------FPYPYFVSVIHLLVGVVYCLVSWAVGLPKR-A---P-----ID----SKLLKLLIPVAV 180 (427)
Q Consensus 122 ~~~~-~~~K~~~~~-------f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~-~---~-----~~----~~~~~~~~~~~~ 180 (427)
.+.| +..||.-+. |.+|+..+..-|+.-++++.++...+.+.. + . .+ .-.-+..++.++
T Consensus 15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal 94 (372)
T KOG3912|consen 15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPAL 94 (372)
T ss_pred ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHH
Confidence 3444 567887663 779988888777766666555433221110 0 0 00 001234567899
Q ss_pred HHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC----------ccch
Q 014279 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----------LSFN 250 (427)
Q Consensus 181 ~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~----------~~~~ 250 (427)
|...+..+.|.+|.+++++.+++++....+|+.+++..+++++++.++|+++..+.+|++++...| .+.-
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~i 174 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSI 174 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999876543 2333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC--CChhhHHHHHHHHHHHHHHHHHHH----hccchhh--hcc----chhhhhh
Q 014279 251 WTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAII----VEGPQLI--KHG----LSDAISK 318 (427)
Q Consensus 251 ~~G~~l~l~a~l~~a~~~v~~kk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~----~~~~~~~ 318 (427)
..|+++.+++-+.-|.+.++.+|..++ ++|.+...|..+++.+.+...... ..+.... ..+ |.+.+..
T Consensus 175 itGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~ 254 (372)
T KOG3912|consen 175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAA 254 (372)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHH
Confidence 689999999999999999999998854 789999999999996655433332 2221111 111 2222222
Q ss_pred hc-hHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 319 VG-MVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 319 ~~-~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
.+ .+.....+....+--.++|+......+..|+.+-.+...++..+..+++.....|.+...|+.|.++.+.|+.+|+.
T Consensus 255 ~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 255 LQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred hcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22222222222222345666677778899999999999999999999999999999999999999999999999986
Q ss_pred HHH
Q 014279 398 IKA 400 (427)
Q Consensus 398 ~~~ 400 (427)
.-+
T Consensus 335 il~ 337 (372)
T KOG3912|consen 335 ILF 337 (372)
T ss_pred HHh
Confidence 543
No 30
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.71 E-value=2.5e-16 Score=137.41 Aligned_cols=145 Identities=32% Similarity=0.465 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-------CCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhc-hHHH
Q 014279 253 GFISAMISNISFTYRSIYSKKAMT-------DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKF 324 (427)
Q Consensus 253 G~~l~l~a~l~~a~~~v~~kk~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 324 (427)
|++++++|+++.++++++.|+.++ +.|+.+++.|+++.+.+.++|.+++.|+++.............. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 789999999999999999999774 46899999999999999999999999887754322111000111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 325 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 325 ~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
+..++.+|++++++|+..+.+++++||+++++.+.+|.++.+++|+++|||++|+.+++|.++.+.|+++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 7778889999999999999999999999999999999999999999999999999999999999999999974
No 31
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.71 E-value=1.7e-15 Score=141.95 Aligned_cols=212 Identities=16% Similarity=0.180 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc-
Q 014279 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL- 247 (427)
Q Consensus 169 ~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~- 247 (427)
+++...+...++++.+.+.+.+.++++++++++++++.+..+++++++++++|+|++.+||+++++.++|+.+...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 3455566777999999999999999999999999999999999999999999999999999999999999998754211
Q ss_pred ----------------cchHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhhHHHHHHHHHHHHHHHHHHHhccchhhh
Q 014279 248 ----------------SFNWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIK 309 (427)
Q Consensus 248 ----------------~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (427)
.....|+++.++++++.++..++.+|.+++- +.+.........|.++.++...+.++.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~ 173 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE 173 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1135899999999999999999999999764 4445555666677666666555555544444
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHH
Q 014279 310 HGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 388 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lv 388 (427)
.++.+ ..+. ..|..++..++.|.... ..+|+.+...-.....+..+++.++++++||.++|...++|..++
T Consensus 174 ~g~f~---G~~~-~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 174 SGFFH---GYSW-WVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred CCchh---hcch-HHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 44332 2222 23444555555554444 567999999999999999999999999999999999999998764
No 32
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.68 E-value=3.3e-14 Score=135.52 Aligned_cols=224 Identities=13% Similarity=0.154 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC----
Q 014279 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---- 246 (427)
Q Consensus 171 ~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~---- 246 (427)
+...+...++++.+.+-+.+.++.+.+++++++...+..+.++++..++++||.+++||.++++.++|+.+.-.+.
T Consensus 91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 3445566688899888899999999999999999999999999999999999999999999999999999986211
Q ss_pred -------ccchHHHHHHHHHHHHHHHHHHHHHHHhhcC--CChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhh
Q 014279 247 -------LSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS 317 (427)
Q Consensus 247 -------~~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
....+.|+...+.+++..++..+|.+|++++ .+-+........+|.++.+...+..|+....+.++. .
T Consensus 171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff---~ 247 (345)
T KOG2234|consen 171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFF---Y 247 (345)
T ss_pred CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcc---c
Confidence 1234789999999999999999999999954 555555555566666666655555555444322222 1
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 318 KVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 318 ~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
.+. ...|..++..++-|.+.. ..+++.+...-.....+..+++.+.|+.+||.++|....+|..+++.++.+|+.
T Consensus 248 G~s-~~vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~ 322 (345)
T KOG2234|consen 248 GYS-SIVWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL 322 (345)
T ss_pred ccc-HHHHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence 222 234566666666665555 455778888888888888899999999999999999999999999999999995
Q ss_pred HHHHh
Q 014279 398 IKAQM 402 (427)
Q Consensus 398 ~~~~~ 402 (427)
.+.++
T Consensus 323 ~P~~~ 327 (345)
T KOG2234|consen 323 YPARD 327 (345)
T ss_pred CCccc
Confidence 55543
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.50 E-value=4.7e-15 Score=133.93 Aligned_cols=256 Identities=9% Similarity=0.079 Sum_probs=197.1
Q ss_pred HHHHHHHcc-CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH
Q 014279 126 ILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (427)
Q Consensus 126 ~~~K~~~~~-f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii 204 (427)
+.+.++-.. .+.|..-+++.++.-+++--++..+++ +.-+..|+++++.++...-++++.-.|.||++..-..++
T Consensus 35 ~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lL 110 (336)
T KOG2766|consen 35 FTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLL 110 (336)
T ss_pred hhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHH
Confidence 334444333 557988888887665554444433322 233456777889899998899999999999999999999
Q ss_pred HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc--------cchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014279 205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMT 276 (427)
Q Consensus 205 ~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~--------~~~~~G~~l~l~a~l~~a~~~v~~kk~~~ 276 (427)
-.-..+.+++++|+|+|.|+.+.++.|+++++.|+.+....|. +....|+++.++++-+||..|+..+.+.+
T Consensus 111 Dcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk 190 (336)
T KOG2766|consen 111 DCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK 190 (336)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence 9999999999999999999999999999999999998866442 33468999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHH
Q 014279 277 DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAV 356 (427)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv 356 (427)
+.|..+++....+++++....- ++.|..+...-.|. + . ....+...++.|+...+.-..++..|+...++
T Consensus 191 n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~-------~-~-i~~yl~f~L~MFllYsl~pil~k~~~aT~~nl 260 (336)
T KOG2766|consen 191 NADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWD-------S-A-IFLYLRFALTMFLLYSLAPILIKTNSATMFNL 260 (336)
T ss_pred cCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeeh-------H-H-HHHHHHHHHHHHHHHHhhHHheecCCceEEEh
Confidence 9999999999999999988776 44554433221111 1 1 11122234444555445556778888888888
Q ss_pred HHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 357 GNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 357 ~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
.-....++++++ ..||-++.|...+..+.+..|..+|.-
T Consensus 261 slLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 261 SLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred hHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 888888888888 778888999999999999999999954
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.29 E-value=2.3e-11 Score=113.01 Aligned_cols=189 Identities=16% Similarity=0.156 Sum_probs=133.8
Q ss_pred cchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC---------------------------cc
Q 014279 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---------------------------LS 248 (427)
Q Consensus 196 ~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~---------------------------~~ 248 (427)
++++.....++..++++++..+.+.+||++..++++.++...|+......| .+
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 567888899999999999999999999999999999999999988532211 02
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHH-HH---h-ccchhhhccchhhhhhhchHH
Q 014279 249 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA-II---V-EGPQLIKHGLSDAISKVGMVK 323 (427)
Q Consensus 249 ~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~-~~~~~~~~~~~~~~~~~~~~~ 323 (427)
..+.|....+.+.++.++..+++++..++.+. +.|...++..+..+.. .. . +.......++ ..+++.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 153 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDT---MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF-----FIGYPT 153 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCC---chHHHHHHHHHHHHHHHHHHHhhcccchhhccCc-----ccCCch
Confidence 34678888889999999999999998765432 2444444443333322 11 1 1111111110 111222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHH
Q 014279 324 FISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (427)
Q Consensus 324 ~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly 395 (427)
..+.++ +.....+.+..+.+++.++.+.++...++++++.++|+++|||+++..+++|..+++.|+.+|
T Consensus 154 ~~~~~~---~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWIVG---LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHH---HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 222222 222233344567889999999999999999999999999999999999999999999998765
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.24 E-value=6e-11 Score=99.06 Aligned_cols=120 Identities=17% Similarity=0.316 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHhhhhhcccchh
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVS 199 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~al~~~~~s 199 (427)
....+++|+..++++ |...+++|+.++.+ +.+... ....+....+++.+...+..+++ ..++..+.++++++++++
T Consensus 4 a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 81 (126)
T PF00892_consen 4 AIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS 81 (126)
T ss_pred eeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence 455678899998876 99999999999987 443332 22222244566667777777777 478999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 200 ~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
..+++..++|+++.++++++++|+++++++.+++++++|+.++.
T Consensus 82 ~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 82 IVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998764
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.20 E-value=1.1e-10 Score=95.04 Aligned_cols=135 Identities=20% Similarity=0.136 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHH
Q 014279 253 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (427)
Q Consensus 253 G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (427)
-.++++++++++++..++.|--.+++||...+...++...+++..+.+....++... .-.++.|..++.+|
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~---------~~~~k~~lflilSG 74 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGG---------EIGPKSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceeccc---------ccCcceehhhhHHH
Confidence 357899999999999999999999999999999999999888887777665443211 11234577888899
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 333 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 333 v~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
+.+.+..++.|++++.-.+.......-+.+++++++|++++||++|..+++|++++.+|..+.+
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9888888999999999999888888999999999999999999999999999999999987643
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.15 E-value=4.2e-10 Score=91.74 Aligned_cols=121 Identities=21% Similarity=0.248 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchh
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA--PIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s 199 (427)
....++.|..+++.+ |.+-++.|-++..+.+........+... ..+++.|.++.+-|+...++..+++.+++...++
T Consensus 16 ~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as 94 (140)
T COG2510 16 GLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKAS 94 (140)
T ss_pred HHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcc
Confidence 455588899998776 9999999998888877655443332222 2577888899999988899999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 200 ~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
...-+-.++|+++++++++++|||++..+|+|++++++|+.+.+
T Consensus 95 ~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 95 RVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred eEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999998765
No 38
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.10 E-value=7.3e-10 Score=92.44 Aligned_cols=124 Identities=21% Similarity=0.247 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHH-HHHHHH
Q 014279 262 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF-YHLYNQ 340 (427)
Q Consensus 262 l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~-~~~~~~ 340 (427)
++||.+.++.|+..++.|+....++....+.+ +++.....+..+.. .... ..+..++..+++ ....+.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFK---------NLSP-RQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcccccc---------CCCh-hhhhhhhHhhccceehHHH
Confidence 47899999999999999999999999999998 66666665443211 1111 112333334444 455666
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
..++++++.++...++...+.|+++.++++++++|++++.+++|.++++.|+.+.+
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999998754
No 39
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.09 E-value=2.9e-10 Score=99.34 Aligned_cols=218 Identities=13% Similarity=0.094 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC--cc
Q 014279 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--LS 248 (427)
Q Consensus 171 ~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~--~~ 248 (427)
.+++..|.+++..+.++.+..+++.++++.++-+.+|.--|+.+++++.+|+|+...++++.++.+.|++++...| ..
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 4556678888889999999999999999999999999999999999999999999999999999999999998655 35
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHH----HHH-HHhccchhhhccchhhhhhhchHH
Q 014279 249 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCI----PPA-IIVEGPQLIKHGLSDAISKVGMVK 323 (427)
Q Consensus 249 ~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 323 (427)
..+.|+.++++++...|+|.+..|+...+.+--+...+++..+..-+. |.. +.+.+-+.+++ + +. .
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qs-F----A~----~ 202 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQS-F----AA----A 202 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHH-H----hh----C
Confidence 578999999999999999999999998665543344444443332221 111 11122111110 0 01 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 324 FISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 324 ~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
.|..++..+.+....|+.....+....|...++..............++-+-..+...+.|.+++..|..+.-.
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiii 276 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIII 276 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheec
Confidence 24555555555556666655677888999999988888888888888777778999999999999999887543
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.02 E-value=1.6e-09 Score=89.59 Aligned_cols=105 Identities=19% Similarity=0.330 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCC--CCCCHHHHHHHHHHHHHHH-HHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHH
Q 014279 143 VIHLLVGVVYCLVSWAV-GLPKR--APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF 218 (427)
Q Consensus 143 ~~r~~~~~l~l~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~-l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l 218 (427)
.+|+.++.+++.+.... ++.+. +..+++.+...+..|++.. .+..+.++|+++.+ +....+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 47888887776654333 21111 1122344556667677765 88999999999999 58889999999999999999
Q ss_pred HhCcccChhhHHHHHHHHhhhhhhccCCcc
Q 014279 219 ILGQQLPLTLWLSLAPVVIGVSMASLTELS 248 (427)
Q Consensus 219 ~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~ 248 (427)
++|||++++++++++++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999887654
No 41
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.98 E-value=1.5e-07 Score=88.33 Aligned_cols=210 Identities=18% Similarity=0.182 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhhHHHHHHHHHHHhCcccChhhH----HHHHHHHhhhhhhc
Q 014279 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS 243 (427)
Q Consensus 169 ~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii-~s~~Pv~~~il~~l~l~er~~~~~~----l~l~l~~~Gv~l~~ 243 (427)
.+.+..-+..|++..+++.+.+.|++++.+|.+.-+ ..++.+.+.++++++++|--+..++ ++++++++|+++.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 477788889999999999999999999998875544 5888899999999999997766654 48899999999987
Q ss_pred cCCcc--------chHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhh
Q 014279 244 LTELS--------FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDA 315 (427)
Q Consensus 244 ~~~~~--------~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (427)
..|.+ ....|++..+++.+.|..|.++.|. .++|++....=+++--.+..+.+....+ ....
T Consensus 122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~~~~-~~~~------- 191 (269)
T PF06800_consen 122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNLFSK-KPFF------- 191 (269)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhhccc-cccc-------
Confidence 65421 2256999999999999999999775 4678887766655444333333333221 1111
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchh----hHHHHHHHHHH
Q 014279 316 ISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQ----TGIGTVIAIAG 391 (427)
Q Consensus 316 ~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~----~~iG~~lvl~G 391 (427)
+... |.. +..|++.-..|.+.+...++.+..+.=...-+..+++.+.+.++++|+-+.. .++|.++++.|
T Consensus 192 -~k~~----~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G 265 (269)
T PF06800_consen 192 -EKKS----WKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG 265 (269)
T ss_pred -ccch----HHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence 1111 222 3346666667777777888888888888888999999999999999997765 56788888877
Q ss_pred HHH
Q 014279 392 VAA 394 (427)
Q Consensus 392 v~l 394 (427)
..+
T Consensus 266 ~il 268 (269)
T PF06800_consen 266 AIL 268 (269)
T ss_pred hhc
Confidence 653
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.90 E-value=1e-07 Score=92.38 Aligned_cols=141 Identities=14% Similarity=0.126 Sum_probs=107.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHH
Q 014279 248 SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISD 327 (427)
Q Consensus 248 ~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
.....|.++.++++++|+...++.|.. .+++|.++.++...++.+++++............ ........+..
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~ 75 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLK-------TLIQTPQKIFM 75 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH-------HHHcCHHHHHH
Confidence 344689999999999999999999765 7799999999999999887776654432111100 00101111222
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 328 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 328 l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
.+..++.....+.+.++.+++.++...++..++.|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 223344444556688899999999999999999999999999999999999999999999999998654
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.84 E-value=1.4e-07 Score=89.45 Aligned_cols=140 Identities=17% Similarity=0.252 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHH
Q 014279 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (427)
Q Consensus 252 ~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (427)
.|.++.++++++|+...+..|. ..+++|.++.++..+++.+.+.+..............+ ........+..+...
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERL----KRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH----hCcccchHHHHHHHH
Confidence 4889999999999999999998 46799999999999999888776554432211000000 000111223345556
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 332 gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
|++....+.+.+..++++++...++..++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66666777788899999999999999999999999999999999999999999999999988653
No 44
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.72 E-value=7.4e-07 Score=84.47 Aligned_cols=118 Identities=20% Similarity=0.122 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHccCC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHhhhhhcccchh
Q 014279 122 VIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVS 199 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~-~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~al~~~~~s 199 (427)
....++.|+..++.+ .+..+..+++.++.+++.+......+. ...+.+.+..++..+++. .++..++++++++.+++
T Consensus 141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 219 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPS 219 (260)
T ss_pred HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 566677888887654 235566678888888776554433222 223555666666666664 57888999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhh
Q 014279 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 240 (427)
Q Consensus 200 ~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~ 240 (427)
.+.++..++|++++++++++++|+++..++.|++++++|+.
T Consensus 220 ~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 220 AASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999873
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.72 E-value=3.6e-07 Score=87.90 Aligned_cols=133 Identities=11% Similarity=0.064 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHH
Q 014279 254 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM 333 (427)
Q Consensus 254 ~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv 333 (427)
+++.++++++++..+++.||..++.++. ..+....+.+.+.|+........ .+. .. ....+..++..++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~----~~~----~~-~~~~~~~~~~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQV----GWS----RL-PATFWLLLAISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccC----CCC----Cc-chhhHHHHHHHHH
Confidence 5688999999999999999888775553 35555666666777655421110 011 00 1122334455566
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 334 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
....++.+.++.+++.++...++..+..|+++.+++++++||+++..+++|.++++.|+.+...
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 6667777778899999999999999999999999999999999999999999999999987653
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.56 E-value=2.9e-06 Score=84.25 Aligned_cols=136 Identities=13% Similarity=0.214 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-cCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHH
Q 014279 253 GFISAMISNISFTYRSIYSKKAM-TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (427)
Q Consensus 253 G~~l~l~a~l~~a~~~v~~kk~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (427)
=+..++..-++|+..+++.|..+ ..+++..+.+|...++.++++|+.+..+...... ...+ ..+..+...
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~--------~~~~-~~~~~l~l~ 84 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP--------PLSV-SILSKIGLL 84 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC--------cchH-HHHHHHHHH
Confidence 34566777889999999999877 4699999999999999999998877654321100 0011 123445556
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHh------cCCccchhhHHHHHHHHHHHHHHHH
Q 014279 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILA------FGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 332 gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~------fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
|+++..++.+.+..++++++...++..++.|++++++++++ ++|+++..+++|.++.++|+.+...
T Consensus 85 g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 85 GFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 77665666678889999999999999999999999999999 6999999999999999999987654
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.47 E-value=7.8e-06 Score=79.17 Aligned_cols=120 Identities=22% Similarity=0.279 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHhhhhhcccchhH
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSF 200 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~al~~~~~s~ 200 (427)
....++.|+..++.+ |..+. +...++.+.+.+......+ ....+...+...+..+++. .+++.++++++++++++.
T Consensus 161 a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~ 237 (293)
T PRK10532 161 AIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRT 237 (293)
T ss_pred HHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhH
Confidence 455566777765544 65554 4445555544443332211 1223444454455566654 477889999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhcc
Q 014279 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (427)
Q Consensus 201 ~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (427)
++++..++|++..++++++++|+++..+++|.+++++|++....
T Consensus 238 as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 238 FGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998753
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.42 E-value=1e-05 Score=78.36 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHH-HHHHHHhhhhhcccchh
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVS 199 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~al~~~~~s 199 (427)
....+.+|+... +++...+++++.++.+.+.++... +.+.....+.+.+..++..+++. .++..++++++++++++
T Consensus 163 a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~ 240 (292)
T PRK11272 163 AFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA 240 (292)
T ss_pred HHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 344455666543 235667788888887766554332 21111112445666667777764 47888999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 200 ~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
...++..++|++.+++++++++|+++..+++|.++++.|+.+....
T Consensus 241 ~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987653
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.41 E-value=1e-06 Score=85.26 Aligned_cols=63 Identities=24% Similarity=0.374 Sum_probs=58.8
Q ss_pred HHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 181 ~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
.+.++..+...|+.+.|.+..+-+.++..++.++++..++|||++++++.|++++++|..++.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 456778899999999999999999999999999999999999999999999999999998764
No 50
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.39 E-value=1e-05 Score=78.43 Aligned_cols=119 Identities=15% Similarity=0.210 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 014279 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~ 201 (427)
...++++|+..++.+ |.... ....+..+.........+ ....+.+.+..++..++...++..++++++++.+++.+
T Consensus 169 A~~~v~~k~~~~~~~-~~~~~--~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~ 244 (295)
T PRK11689 169 AAYCNVTRKYARGKN-GITLF--FILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLL 244 (295)
T ss_pred HHHHHHHhhccCCCC-chhHH--HHHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHH
Confidence 556677788665443 54432 222222222222222211 12345556666666666666789999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhcc
Q 014279 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (427)
Q Consensus 202 ~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (427)
+++..++|++..++++++++|+++..+++|.++++.|+.+...
T Consensus 245 s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 245 ATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999987654
No 51
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.38 E-value=0.00035 Score=68.48 Aligned_cols=281 Identities=11% Similarity=0.037 Sum_probs=163.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccCCChHHHHH-HHHHHHHHHHHH-HHHhCCCC----CCCCCHHHHHHHHHHHHH
Q 014279 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLV-SWAVGLPK----RAPIDSKLLKLLIPVAVC 181 (427)
Q Consensus 108 l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~-~r~~~~~l~l~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~ 181 (427)
+...+++++-.+++.++..-.|+ .++++.- ..+ ...+++.+++.. ......+. ....+...+..-++.|++
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE--~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~ 82 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKKWSWE--TMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGAL 82 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCCCchh--HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHH
Confidence 44556666666666777777777 5545522 221 112233332221 01111110 112345677778888999
Q ss_pred HHHHHHHhhhhhcccchhHHH-HHHhhhHHHHHHHHHHHhCccc---C----hhhHHHHHHHHhhhhhhcc----CCc--
Q 014279 182 HALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQL---P----LTLWLSLAPVVIGVSMASL----TEL-- 247 (427)
Q Consensus 182 ~~l~~~l~~~al~~~~~s~~~-ii~s~~Pv~~~il~~l~l~er~---~----~~~~l~l~l~~~Gv~l~~~----~~~-- 247 (427)
...++.+...+++++.++... +...++.++..++..++++|=. + ..-.++++++++|+++... .|.
T Consensus 83 W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~ 162 (345)
T PRK13499 83 WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKM 162 (345)
T ss_pred HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 999999999999999998855 4578889999999999988633 2 3357889999999998866 332
Q ss_pred ------cc-hHHHHHHHHHHHHHHHHHH-------HHHHHhh-cCCChhhHHHHHHH---HHHHHHHHH-HHHh--ccch
Q 014279 248 ------SF-NWTGFISAMISNISFTYRS-------IYSKKAM-TDMDSTNIYAYISI---IALFVCIPP-AIIV--EGPQ 306 (427)
Q Consensus 248 ------~~-~~~G~~l~l~a~l~~a~~~-------v~~kk~~-~~~~~~~~~~~~~~---~~~~~~~~~-~~~~--~~~~ 306 (427)
++ .-.|++.++++.+.+++++ ...+... .+.|+.....-+.+ .+.+..-+. .... ....
T Consensus 163 ~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~ 242 (345)
T PRK13499 163 GIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKD 242 (345)
T ss_pred ccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 12 3589999999999999999 3333211 23454433222222 333322211 1110 1111
Q ss_pred hhhccchhhhhhhch----HHHHHHHHHHHHHHHHHHHHHHHHhhccChh----HHHHHHHHHHHHHHHHHHHhcCCccc
Q 014279 307 LIKHGLSDAISKVGM----VKFISDLFWVGMFYHLYNQLATNTLERVAPL----THAVGNVLKRVFVIGFSILAFGNKIS 378 (427)
Q Consensus 307 ~~~~~~~~~~~~~~~----~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~----~~sv~~~l~~v~~i~ls~~~fge~ls 378 (427)
... .. +.... ..-...-.+.|+.-+..+.+....-++.+.. ...+...+..+++.+.+. +++|.-+
T Consensus 243 ~~~--~~---~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~ 316 (345)
T PRK13499 243 LSL--KA---DFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKG 316 (345)
T ss_pred ccc--ch---hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccC
Confidence 100 00 11110 1111122334555555555544555555332 233454677788899998 5999877
Q ss_pred ------hhhHHHHHHHHHHHHHHHH
Q 014279 379 ------TQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 379 ------~~~~iG~~lvl~Gv~ly~~ 397 (427)
...++|.++++.|..+...
T Consensus 317 a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 317 ASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred CCccchhHHHHHHHHHHHHHHHHhh
Confidence 6789999999999887654
No 52
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.35 E-value=2.2e-05 Score=77.96 Aligned_cols=138 Identities=13% Similarity=0.059 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHH
Q 014279 250 NWTGFISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 328 (427)
Q Consensus 250 ~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (427)
++.-.++++.--.+...++++.|..++.++ |+.+..++..++.+++...... ..... . .+ ......+..+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~-~-~~------~~~~~~~~~l 117 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWAT-GFRKI-P-RI------KSLKLFLKNF 117 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCC-C-CC------CCHHHHHHHH
Confidence 444444555555555667889999999999 9999999999998776544322 11000 0 00 0012234556
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 329 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 329 ~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
+..|+++...+...+..++.+++..+++...+.|++++++++++++|+++..+++|.+++++|+.+..
T Consensus 118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 66677776666666688899999999999999999999999999999999999999999999998654
No 53
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.34 E-value=1.6e-05 Score=65.32 Aligned_cols=64 Identities=16% Similarity=0.243 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 180 ~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
+++.+...+...+++++|.+.+..+-++.++++.+++++++|||++.++++|++++++|++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4566889999999999999999999999999999999999999999999999999999998765
No 54
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.31 E-value=1.6e-05 Score=66.92 Aligned_cols=119 Identities=14% Similarity=0.051 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHH
Q 014279 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (427)
Q Consensus 252 ~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (427)
.|+++.+.+.++.+...++.|+-+++.+..+.... .. . .+ .. ..+ | + ..++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~~-~---~~-~~-~~~-p-------------------~-~~i~l 53 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-FI-A---AL-LA-FGL-A-------------------L-RAVLL 53 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-HH-H---HH-HH-Hhc-c-------------------H-HHHHH
Confidence 47889999999999999999988876654432111 10 0 00 00 000 0 0 01122
Q ss_pred HHHHHHHH-HHHHHHhhccChhHHHHHHHHHHHHHHHHHHH--hcCCccchhhHHHHHHHHHHHHHHHHH
Q 014279 332 GMFYHLYN-QLATNTLERVAPLTHAVGNVLKRVFVIGFSIL--AFGNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 332 gv~~~~~~-~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~--~fge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
|++.+... +++..++++.+.........+..+...+.++. +|||++|+.+++|.+++++|+++.+..
T Consensus 54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 33333333 35567889999888877777777777777774 899999999999999999999997643
No 55
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.31 E-value=2.7e-05 Score=73.08 Aligned_cols=139 Identities=16% Similarity=0.146 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHH
Q 014279 250 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 329 (427)
Q Consensus 250 ~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (427)
+..|+++++.+-+.|++--.|.|-+ ++.++.++..+..+.+.++++....+...+.... +....+..+..+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~-------~~~~~p~~~~~~~ 76 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELK-------QLLKQPKTLLMLA 76 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHhCcHHHHHHH
Confidence 3479999999999999999988865 8889999999999999998887766654332211 2222334445555
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 330 WVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 330 ~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
..++.-..-.....++...-..+..|...+++|.+.++++.++++|+++..|++..++..+|+..-.
T Consensus 77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~ 143 (293)
T COG2962 77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT 143 (293)
T ss_pred HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 5554433333344578888899999999999999999999999999999999999999999998543
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.25 E-value=5.9e-05 Score=73.22 Aligned_cols=124 Identities=17% Similarity=0.189 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHccCCCh--HHHHHHHHHHHHHHHHHH-HHhCCCC-----CCCCCHHHHHHHHHHHHHHH-HHHHHhhhh
Q 014279 122 VIFNILNKRIYNYFPYP--YFVSVIHLLVGVVYCLVS-WAVGLPK-----RAPIDSKLLKLLIPVAVCHA-LGHVTSNVS 192 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P--~~l~~~r~~~~~l~l~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-l~~~l~~~a 192 (427)
...++++|+..++.+.| ..+..+.++.+.+..... .....+. ....+...+..++..+++.. +...+++.+
T Consensus 156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~ 235 (299)
T PRK11453 156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTL 235 (299)
T ss_pred HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55567777766554433 344555655554433222 1222111 11234556666666666554 778899999
Q ss_pred hcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 193 l~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
+++.++..+.++..++|++..++++++++|+++..+++|.+++++|+.+...+
T Consensus 236 l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 236 LGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999886543
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.16 E-value=9.1e-05 Score=64.16 Aligned_cols=128 Identities=13% Similarity=0.136 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHcc------CCChHHHHHHHHHHHHHHHHHHHH-hCCCCCCC---------C--CHHHHHHHHH
Q 014279 116 MWYFLNVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAP---------I--DSKLLKLLIP 177 (427)
Q Consensus 116 ~w~~~~~~~~~~~K~~~~~------f~~P~~l~~~r~~~~~l~l~~~~~-~~~~~~~~---------~--~~~~~~~~~~ 177 (427)
..-++...-.++.|+.+++ ...|+.+.......+.+.+.+.+. .+.++..+ . +.+.+..++.
T Consensus 7 ~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (153)
T PF03151_consen 7 ASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLIL 86 (153)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHH
Confidence 3334444555666777665 236788888877777777665433 23222100 0 2345666777
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 178 VAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 178 ~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
.+++..+.+...+..++++++-+.+++....-+++.++++++++|+++..++.|+++.++|+.+.+
T Consensus 87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 778888999999999999999999999999999999999999999999999999999999998653
No 58
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.08 E-value=0.00012 Score=71.05 Aligned_cols=123 Identities=15% Similarity=0.155 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHhhcC-CChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHH
Q 014279 262 ISFTYRSIYSKKAMTD-MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (427)
Q Consensus 262 l~~a~~~v~~kk~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~ 340 (427)
++....+++.|..+++ ..|..+.+++..++.+.+.+... ....... ... ..-+..++..|++....+.
T Consensus 12 ~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~-~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 12 FLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRL---------KIS-SALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred HHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCC---------CCC-HHHHHHHHHHHHHHHHHHH
Confidence 3444556788888887 55788888888877665544311 1111000 001 1124445556666666666
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHH
Q 014279 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (427)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly 395 (427)
+.+..++++++...++...+.|+++.++++++++|+++..+++|.+++++|+.+.
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~ 135 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA 135 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence 7889999999999999999999999999999999999999999999999999764
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.96 E-value=0.0002 Score=58.92 Aligned_cols=71 Identities=18% Similarity=0.211 Sum_probs=58.2
Q ss_pred HHHHHHHHH-HHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 014279 328 LFWVGMFYH-LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 328 l~~~gv~~~-~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
.++.|+++. ..+...+..++..++ ..++...+.|+++.++++++|+|+++..+++|.+++++|+.+..+.+
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 344455554 445566678888885 77788889999999999999999999999999999999999887654
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.86 E-value=0.00092 Score=63.78 Aligned_cols=120 Identities=28% Similarity=0.424 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHccCCChHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHhhhhhcccchh
Q 014279 122 VIFNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVS 199 (427)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~al~~~~~s 199 (427)
....+.+|+.. +.+ +..... +++...............+ .+.+...+......+++.. .++.+.+.+++..+++
T Consensus 167 a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~ 242 (292)
T COG0697 167 ALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFLSGFG--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGAS 242 (292)
T ss_pred HHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHhcccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 34556777766 322 445554 5554222222222221111 3345667777888888777 6899999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 200 ~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
....+..+.|++.+++++++++|+++..+++|.++++.|+.+....
T Consensus 243 ~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 243 LVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999987643
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.75 E-value=0.00051 Score=66.41 Aligned_cols=113 Identities=14% Similarity=0.222 Sum_probs=83.1
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHH----HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc-ccc
Q 014279 123 IFNILNKRIYNYFPYPYFVSVIHLL----VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFA-AVA 197 (427)
Q Consensus 123 ~~~~~~K~~~~~f~~P~~l~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~-~~~ 197 (427)
......|... . .|...++.|+. .+.++..++ . +.++.+.+.....+..|++...++.++..+++ +.+
T Consensus 166 ~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~ 237 (290)
T TIGR00776 166 VYVVVAKAFG--V-DGLSVLLPQAIGMVIGGIIFNLGH--I---LAKPLKKYAILLNILPGLMWGIGNFFYLFSAQPKVG 237 (290)
T ss_pred HHHHHHHHcC--C-CcceehhHHHHHHHHHHHHHHHHH--h---cccchHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 3345556542 3 37777666665 333333222 1 11222333444455588888888999999999 999
Q ss_pred hhHHHHHHhhhHHHHHHHHHHHhCcccChhhH----HHHHHHHhhhhhhc
Q 014279 198 VSFTHTIKALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS 243 (427)
Q Consensus 198 ~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~----l~l~l~~~Gv~l~~ 243 (427)
++.+.++.+..|+...+++++++||+.+++++ +|.++++.|+.+..
T Consensus 238 ~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 238 VATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999998764
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.72 E-value=0.00023 Score=60.02 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHH--HhCcccChhhHHHHHHHHhhhhhhccCC
Q 014279 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF--ILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (427)
Q Consensus 175 ~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l--~l~er~~~~~~l~l~l~~~Gv~l~~~~~ 246 (427)
+...-+++.++..+.++++++.+++.+.-+.+..++++.+.++. +++|+++..+++|++++++|+.++..++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 44445567788999999999999999999999999899888885 8999999999999999999999987543
No 63
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.58 E-value=0.0009 Score=55.45 Aligned_cols=71 Identities=15% Similarity=0.242 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 175 ~~~~~~~~~l~~~l~~~al~~~~~s~~~ii-~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
.+...+++.+..++...+++++|.+.+.-+ ....-+.+.+.++++++|+++..+++++.++++|++.+...
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 455566777889999999999999997766 57899999999999999999999999999999999987653
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.56 E-value=0.00086 Score=55.04 Aligned_cols=57 Identities=18% Similarity=0.093 Sum_probs=50.1
Q ss_pred HHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 340 QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 340 ~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
++...++++.+.......-.+.++.+.++|+++|||++|+.+++|.+++++|+.+..
T Consensus 52 ~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 52 VLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 345578888988888777779999999999999999999999999999999998754
No 65
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.55 E-value=0.00016 Score=68.66 Aligned_cols=215 Identities=17% Similarity=0.154 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCCc---c-----
Q 014279 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---S----- 248 (427)
Q Consensus 177 ~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~~---~----- 248 (427)
..-+.+.++...++.|+.+.|.+..+-+.+++.+..++++..+++||++....+|++++++|..++..... +
T Consensus 69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~ 148 (335)
T KOG2922|consen 69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVE 148 (335)
T ss_pred HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHH
Confidence 33455678899999999999999999999999999999999999999999999999999999987754211 0
Q ss_pred ------chHHHHHH-HHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHh---ccchhhhccchhhhhh
Q 014279 249 ------FNWTGFIS-AMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIV---EGPQLIKHGLSDAISK 318 (427)
Q Consensus 249 ------~~~~G~~l-~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 318 (427)
.+ .+++. ..+-.+...+-..+.| ++....+++.|..+.+.+-.+-....- +.-...-.+. ..
T Consensus 149 el~~~~~~-~~Fliy~~~iil~~~il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~----~q 220 (335)
T KOG2922|consen 149 EVWELATE-PGFLVYVIIIILIVLILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN----NQ 220 (335)
T ss_pred HHHHHhcC-ccHHHHHHHHHHHHHHHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC----cc
Confidence 01 12111 1111111111111111 223344556666666655322111000 0000000000 11
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHH-HHHHHHHHHHHHHHHHHhcCCc--cch----hhHHHHHHHHHH
Q 014279 319 VGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTH-AVGNVLKRVFVIGFSILAFGNK--IST----QTGIGTVIAIAG 391 (427)
Q Consensus 319 ~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~-sv~~~l~~v~~i~ls~~~fge~--ls~----~~~iG~~lvl~G 391 (427)
...+..|..++....+....-....++++..++... .+...+-..++++.|.++|+|- .+. ..+.|...++.|
T Consensus 221 l~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G 300 (335)
T KOG2922|consen 221 LFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLG 300 (335)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhhe
Confidence 222333443333333222211233466666665444 4455556678889999999874 333 366788889999
Q ss_pred HHHHHHHH
Q 014279 392 VAAYSYIK 399 (427)
Q Consensus 392 v~ly~~~~ 399 (427)
+.+.+..|
T Consensus 301 ~flL~~~k 308 (335)
T KOG2922|consen 301 IFLLHRTK 308 (335)
T ss_pred eeEeeeec
Confidence 98875433
No 66
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.54 E-value=0.0016 Score=53.06 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccchhHHH-HHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 173 ~~~~~~~~~~~l~~~l~~~al~~~~~s~~~-ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
...+...+++.+..++...+++++|.+.+. +-....-+.+.+.+++++||++++.+++++.+++.|+....
T Consensus 36 ~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 36 IYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 334455666778888999999999999855 44668889999999999999999999999999999998753
No 67
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.51 E-value=0.0013 Score=53.66 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 174 ~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii-~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
..+..-+++.+...+...+++++|.+.+.-+ ....-+.+.+.++++++|+++..+++++.++++|+++....
T Consensus 32 ~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3344556677888889999999999997777 56889999999999999999999999999999999988653
No 68
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.50 E-value=0.0031 Score=61.30 Aligned_cols=135 Identities=16% Similarity=0.280 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCC-ChHHHHHHHHHHHHHHHHHHHHh---CC-CCCCC---CCHHHHHHHHHHHHH
Q 014279 110 TGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAV---GL-PKRAP---IDSKLLKLLIPVAVC 181 (427)
Q Consensus 110 ~~~~~~~w~~~~~~~~~~~K~~~~~f~-~P~~l~~~r~~~~~l~l~~~~~~---~~-~~~~~---~~~~~~~~~~~~~~~ 181 (427)
..+++++..++......++|+++++.+ .|+...+..-.++.++..+.... +. .+..+ ..++.+..++..+++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 555666666677777788899988755 56788877777777665544332 11 11000 123456777888888
Q ss_pred HHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhcc
Q 014279 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (427)
Q Consensus 182 ~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (427)
..+++.+.+...+..++-+.+++..+.-+++.+++.++++++++..+|.|+++++.|..+-..
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 888888888889999999999999999999999999999999999999999999999987654
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.00095 Score=53.59 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhHH-HHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 174 LLIPVAVCHALGHVTSNVSFAAVAVSFT-HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 174 ~~~~~~~~~~l~~~l~~~al~~~~~s~~-~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
..+..-+++.....+.-.+++++|.+.+ .+-.....+.+.+.++++++|+.+..+++++.++++|++.....
T Consensus 32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 3445556677888899999999999984 55578889999999999999999999999999999999987543
No 70
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.47 E-value=0.0017 Score=52.57 Aligned_cols=72 Identities=17% Similarity=0.146 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhcc
Q 014279 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (427)
Q Consensus 173 ~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii-~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (427)
...+..-+++....++...+++++|.+.+.-+ ....-+.+.+.+++++||++++.+++++.++++|++....
T Consensus 30 ~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 30 TPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 34445566677888999999999999985544 6688999999999999999999999999999999998753
No 71
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.44 E-value=3.3e-05 Score=70.54 Aligned_cols=242 Identities=14% Similarity=0.146 Sum_probs=159.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhhHHHHHHH
Q 014279 137 YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAA 215 (427)
Q Consensus 137 ~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii-~s~~Pv~~~il 215 (427)
.|..-+.---+.+.++.++.++. ..+..+...+..-+..|++...++...+-|+++++++.+.-+ ..++.+-+.++
T Consensus 27 ~p~qQ~lGtT~GALifaiiv~~~---~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~ 103 (288)
T COG4975 27 KPYQQTLGTTLGALIFAIIVFLF---VSPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLF 103 (288)
T ss_pred ChhHhhhhccHHHHHHHHHHhee---ecCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceee
Confidence 46555544444444444444433 234456777777888888999999999999999988876544 57788899999
Q ss_pred HHHHhCcccChhh----HHHHHHHHhhhhhhccCCc--------cchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhH
Q 014279 216 SQFILGQQLPLTL----WLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNI 283 (427)
Q Consensus 216 ~~l~l~er~~~~~----~l~l~l~~~Gv~l~~~~~~--------~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~ 283 (427)
+++.++|-.+..+ ..+++++++|+.+.+..|. ++.-.|+...+.+.+.|-.|.+..+.. ++|.+..
T Consensus 104 gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f--~v~g~sa 181 (288)
T COG4975 104 GVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF--DVDGLSA 181 (288)
T ss_pred eEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc--cccchhh
Confidence 9999999766555 3678889999999887653 122468888889999999998887755 3555554
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHH
Q 014279 284 YAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRV 363 (427)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v 363 (427)
..-+.+-..+.-+.+....++.... ...|. -+..|+.-...|.+.+.+-++.+-.+.=...-+-.+
T Consensus 182 iLPqAiGMv~~ali~~~~~~~~~~~-------------K~t~~-nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgVi 247 (288)
T COG4975 182 ILPQAIGMVIGALILGFFKMEKRFN-------------KYTWL-NIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVI 247 (288)
T ss_pred hhHHHHHHHHHHHHHhhcccccchH-------------HHHHH-HHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheee
Confidence 4444333222222222222211111 12222 223466666677777777777766655444556678
Q ss_pred HHHHHHHHhcCCccchhh----HHHHHHHHHHHHHHHH
Q 014279 364 FVIGFSILAFGNKISTQT----GIGTVIAIAGVAAYSY 397 (427)
Q Consensus 364 ~~i~ls~~~fge~ls~~~----~iG~~lvl~Gv~ly~~ 397 (427)
++.+-+.++++|+-|..+ ++|.++++.|..+...
T Consensus 248 isTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 248 ISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred eeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 888999999999988765 5677888877765443
No 72
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.35 E-value=0.0026 Score=62.31 Aligned_cols=69 Identities=17% Similarity=0.135 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 014279 331 VGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 331 ~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
.+++=...|++...+.++++.....+......++++++|+++++++.++.+++|++++++|+.+.....
T Consensus 85 la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 85 LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 477888899999999999999999999999999999999999999999999999999999998866554
No 73
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.32 E-value=0.008 Score=55.48 Aligned_cols=122 Identities=22% Similarity=0.236 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHhhhhhcccc
Q 014279 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVA 197 (427)
Q Consensus 119 ~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~al~~~~ 197 (427)
.++..+.+..|++-..-+-+ .=...-+.+++++.++.....- .....++..+..-+..+++.. +-..+...++...|
T Consensus 158 ~~Wa~YIv~G~r~g~~~~g~-~g~a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp 235 (292)
T COG5006 158 ACWALYIVLGQRAGRAEHGT-AGVAVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLP 235 (292)
T ss_pred HHHHHHHHHcchhcccCCCc-hHHHHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCC
Confidence 33367777777777533333 3334556666666555543221 112235555555666666665 66779999999999
Q ss_pred hhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhh
Q 014279 198 VSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (427)
Q Consensus 198 ~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~ 242 (427)
..++.++.+++|.+.++.++++++|+++..||++++.++++.+=.
T Consensus 236 ~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 236 ARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred hhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999998887733
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.20 E-value=0.014 Score=49.75 Aligned_cols=130 Identities=12% Similarity=0.145 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC-hhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHH
Q 014279 254 FISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (427)
Q Consensus 254 ~~l~l~a~l~~a~~~v~~kk~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (427)
.++++.+.++-+++..+.-++.++.+ |+.........+++.+....++.+.+... .......|..+ .|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~---------~~~~~p~w~~l--GG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLA---------SLSSVPWWAYL--GG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccc---------hhccCChHHhc--cH
Confidence 46778888888888888888887776 99999999999999888877776654211 11111223222 57
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHH-HHHHHHHHH-hc---CCccchhhHHHHHHHHHHHHH
Q 014279 333 MFYHLYNQLATNTLERVAPLTHAVGNVLKR-VFVIGFSIL-AF---GNKISTQTGIGTVIAIAGVAA 394 (427)
Q Consensus 333 v~~~~~~~~~~~~l~~~sa~~~sv~~~l~~-v~~i~ls~~-~f---ge~ls~~~~iG~~lvl~Gv~l 394 (427)
+++..+-......+.+.++.........-. +.+.+++.+ +| ++++++.+++|.+++++|+.+
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 777777777777889999988866554443 445556654 33 367999999999999999863
No 75
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.20 E-value=0.014 Score=47.54 Aligned_cols=53 Identities=15% Similarity=0.243 Sum_probs=45.0
Q ss_pred HHhhccChh-HHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 344 NTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 344 ~~l~~~sa~-~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
.++++.+-. .+++-.-+-.+.+.+.++++|||++++.+++|.++++.|+...+
T Consensus 54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 566666654 45787888889999999999999999999999999999998753
No 76
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.15 E-value=0.0047 Score=51.22 Aligned_cols=55 Identities=20% Similarity=0.214 Sum_probs=45.3
Q ss_pred HHhhccChhH-HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHH
Q 014279 344 NTLERVAPLT-HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 344 ~~l~~~sa~~-~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
.++++.+-.. +++..-+..+.+.+.++++|||++|+.+++|..++++|+...+..
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 5566665533 466666788899999999999999999999999999999887543
No 77
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.15 E-value=0.0064 Score=57.46 Aligned_cols=112 Identities=16% Similarity=0.174 Sum_probs=77.1
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 014279 123 IFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (427)
Q Consensus 123 ~~~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ 202 (427)
.+....|.... .|+...+-|.+...+...++.... +.....|+.++ -+..|+++..++.++..|.+...++..-
T Consensus 152 ~Y~~~~~~~~~---~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af 225 (269)
T PF06800_consen 152 IYSVIPKAFHV---SGWSAFLPQAIGMLIGAFIFNLFS--KKPFFEKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAF 225 (269)
T ss_pred HHHHHHHhcCC---ChhHhHHHHHHHHHHHHHHHhhcc--cccccccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhh
Confidence 34444555222 477776666554444434443322 22223344444 4566999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhCcccChhhHH----HHHHHHhhhh
Q 014279 203 TIKALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGVS 240 (427)
Q Consensus 203 ii~s~~Pv~~~il~~l~l~er~~~~~~l----~l~l~~~Gv~ 240 (427)
.+..+.++...+.+.+++||+-+++++. +++++++|.+
T Consensus 226 ~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 226 TLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred hHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 9999999999999999999998888664 4555555544
No 78
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.13 E-value=0.0013 Score=61.91 Aligned_cols=75 Identities=23% Similarity=0.285 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 326 SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 326 ~~l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
..+..-+++..+.|...|..++..+|.++.+....|.+++.++++++++++++..||++..+.+.|+.+.+....
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 344556788888889999999999999999999999999999999999999999999999999999998766543
No 79
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.08 E-value=0.014 Score=57.28 Aligned_cols=139 Identities=17% Similarity=0.091 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHH--HHHHHHHH-hccchhhhccchhhhhhhchHHHHHH
Q 014279 251 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALF--VCIPPAII-VEGPQLIKHGLSDAISKVGMVKFISD 327 (427)
Q Consensus 251 ~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
..|+++++++++|++...+-+||. ++ -++|.. |- ..+.+ ++.|+..- ...+. +.+.+.... ...+..
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k~-w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~-----f~~~~~~~~-~~~~~~ 75 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-KK-WSWETM-WS-VGGIFSWLILPWLIAALLLPD-----FWAYYSSFS-GSTLLP 75 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-CC-CchhHH-HH-HHHHHHHHHHHHHHHHHHhhh-----HHHHHHhcC-HHHHHH
Confidence 579999999999999999999883 43 334443 22 22221 12221111 11111 111112122 334555
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhH-HHHHHHHHHHHHHHHHHHhcCCcc-------chhhHHHHHHHHHHHHHHHHHH
Q 014279 328 LFWVGMFYHLYNQLATNTLERVAPLT-HAVGNVLKRVFVIGFSILAFGNKI-------STQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 328 l~~~gv~~~~~~~~~~~~l~~~sa~~-~sv~~~l~~v~~i~ls~~~fge~l-------s~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
-+++|++--..|...+..+++.+-.. ..+..-+.-+.+.+++.+++||-. ....++|.+++++|+.+..+.-
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 66678887788888888888877644 466667788899999999998643 2347889999999999988743
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.97 E-value=0.028 Score=47.98 Aligned_cols=115 Identities=16% Similarity=0.139 Sum_probs=83.8
Q ss_pred HHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH
Q 014279 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPK-RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (427)
Q Consensus 126 ~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii 204 (427)
.+|-++-+....|+.-+++-+..+.+.+.+++....++ ....++..| +....|++......+.++....++++.+.++
T Consensus 18 ~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l 96 (138)
T PF04657_consen 18 AFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLGVFFVLSNIILVPRLGAALTTIL 96 (138)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 45555555555699999999999988877665443332 222222233 4445899999999999999999988876655
Q ss_pred -HhhhHHHHHHHHHH----HhCcccChhhHHHHHHHHhhhhh
Q 014279 205 -KALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM 241 (427)
Q Consensus 205 -~s~~Pv~~~il~~l----~l~er~~~~~~l~l~l~~~Gv~l 241 (427)
..-+.+..+++..+ ..+++++.++++++++.++|+.+
T Consensus 97 ~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 97 IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 56677778888875 35678999999999999999864
No 81
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.86 E-value=0.0078 Score=49.18 Aligned_cols=56 Identities=21% Similarity=0.236 Sum_probs=46.9
Q ss_pred HHHhhccChhH-HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHH
Q 014279 343 TNTLERVAPLT-HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 343 ~~~l~~~sa~~-~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
..++++.+-.. +++-.-+..+.+.+.++++|||++++.+++|..++++|+...+..
T Consensus 48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 35667766544 477777888999999999999999999999999999999987543
No 82
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.62 E-value=0.014 Score=46.16 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHH
Q 014279 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPV 235 (427)
Q Consensus 176 ~~~~~~~~l~~~l~~~al~~~~~s~~~ii-~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~ 235 (427)
.....++.....+...+++++|.+.+.-+ ..+..+.+.+.+.+++||+++..+++++.++
T Consensus 33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33444677888999999999999997554 6799999999999999999999999998764
No 83
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.45 E-value=0.023 Score=45.73 Aligned_cols=54 Identities=20% Similarity=0.202 Sum_probs=47.1
Q ss_pred HHhhccChh-HHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 344 NTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 344 ~~l~~~sa~-~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
.++++.+-. .+++-.-+-.+.+.+.++++|||++++.+++|..++++|+...+.
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 566776654 458888899999999999999999999999999999999988664
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.44 E-value=0.035 Score=44.92 Aligned_cols=53 Identities=15% Similarity=0.124 Sum_probs=46.1
Q ss_pred HHhhccCh-hHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 344 NTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 344 ~~l~~~sa-~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
.++++.+- ..+++-.-+-.+.+.+.++++|||++++.+++|..+++.|+...+
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 56677665 446888888999999999999999999999999999999998764
No 85
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.40 E-value=0.064 Score=50.95 Aligned_cols=135 Identities=11% Similarity=0.132 Sum_probs=99.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHccCC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CCCHHHHHHHHHHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRA-----PIDSKLLKLLIPVAV 180 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~-~P~~l~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 180 (427)
.....++++.+.++=..-+-.++.++..+. .++.+.+.--++.+++...+......... ...++.++.+++.+.
T Consensus 170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 345666677776666666677788887644 34555544444444444433322111111 123567889999999
Q ss_pred HHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhh
Q 014279 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (427)
Q Consensus 181 ~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l 241 (427)
|.+.++.+.++-++.-++-+.++|..+-=++.++++.+.++.+.+..+|+++.+++.|+.+
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 9999999999999998888888999999999999999999999999999999999998875
No 86
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.39 E-value=0.036 Score=51.21 Aligned_cols=66 Identities=14% Similarity=0.116 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhh
Q 014279 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (427)
Q Consensus 176 ~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l 241 (427)
....++......+..+.+++.+..+..++..+.++++.+++.++++++++..+++|+.+++.|+.+
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344556667778899999999999999999999999999999999999999999999999999764
No 87
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.14 E-value=0.0078 Score=56.57 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHH
Q 014279 253 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (427)
Q Consensus 253 G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (427)
|++.+++|+++++...+=.||. +.-|++-..++++....+......++.+.+.+ +...++.|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f-----------------~p~amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DTGDGFFFQWVMCSGIFLVGLVVNLILGFPPF-----------------YPWAMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cCCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc-----------------eeHHHhhh
Confidence 5778899999999888888877 45588766666666555555544444443332 11122234
Q ss_pred HHHHHHHHHHHHHhhccChhH-HHHHHHHHHHHHHHHHHH-hcCCc-----cchhhHHHHHHHHHHHHHHHHHHHHh
Q 014279 333 MFYHLYNQLATNTLERVAPLT-HAVGNVLKRVFVIGFSIL-AFGNK-----ISTQTGIGTVIAIAGVAAYSYIKAQM 402 (427)
Q Consensus 333 v~~~~~~~~~~~~l~~~sa~~-~sv~~~l~~v~~i~ls~~-~fge~-----ls~~~~iG~~lvl~Gv~ly~~~~~~~ 402 (427)
.+-...|.+..-.++.++-.. ..+-+..+-+.....|-+ +||++ -.+.+++|.++++.|..+|...|..+
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 444444444444445444322 233444455555555543 66643 35679999999999999998877654
No 88
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.01 E-value=0.38 Score=46.85 Aligned_cols=117 Identities=24% Similarity=0.242 Sum_probs=83.7
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhccc---hhhhccchhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccChhH
Q 014279 277 DMDSTNIYAYISIIALFVCIPPAIIVEGP---QLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLT 353 (427)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~l~~~sa~~ 353 (427)
++.|....+..-++-.++++...+.-+.. .... ++.+.+ ...+.-..-+..-++++.+-|-+.|..+...+|.+
T Consensus 44 ~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~-~l~~~i--~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaat 120 (345)
T KOG2234|consen 44 MFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLK-SLSKEI--LAAPRETLKVSVPALIYALQNNLQYVALSNLDAAT 120 (345)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhh-hcCHHH--HhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchh
Confidence 35677788888888777777655543322 1110 111110 11110112233345667777778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 354 ~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
+.+...+|...+.+++++++++++++.||...++.++|+.+.+
T Consensus 121 yqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 121 YQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999877
No 89
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.92 E-value=0.0089 Score=55.59 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=81.7
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH
Q 014279 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (427)
Q Consensus 125 ~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii 204 (427)
.+.-+++-++-++-+.++.+-.+....-+..+...+.. ..+-.+++|....-+|++..+++.+...++|.--++-.++.
T Consensus 207 yIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~-~lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim 285 (346)
T KOG4510|consen 207 YIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAV-QLPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIM 285 (346)
T ss_pred HHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccce-ecCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehh
Confidence 35567776654433333333332222222223322221 22334566667778899999999999999999888889999
Q ss_pred HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhh
Q 014279 205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (427)
Q Consensus 205 ~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~ 242 (427)
+.+..+|..++..+++++-++.+.|.|.++++...+..
T Consensus 286 ~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 286 TYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred hHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 99999999999999999999999999988776655543
No 90
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.74 E-value=0.065 Score=51.98 Aligned_cols=117 Identities=16% Similarity=0.139 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHH
Q 014279 250 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 329 (427)
Q Consensus 250 ~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (427)
...|.++++.++++.+...+++||-..+.+....-.-.. +.. ....+.+|..++
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~--------~~~------------------~l~~~~W~~G~~ 58 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSG--------GRS------------------YLRRPLWWIGLL 58 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccch--------hhH------------------HHhhHHHHHHHH
Confidence 467999999999999999999998754322200000000 000 011112233332
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 330 WVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 330 ~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
.. +.+-..+ +.++...++...+..+.+.-++..+++..+++|+++..+++|+++++.|..+..
T Consensus 59 ~~-~~g~~~~---~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LM-VLGEILN---FVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HH-hcchHHH---HHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 22 2233344 345577788888888889999999999999999999999999999999987643
No 91
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.62 E-value=0.42 Score=41.10 Aligned_cols=136 Identities=7% Similarity=0.092 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCC-hhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHH
Q 014279 251 WTGFISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 329 (427)
Q Consensus 251 ~~G~~l~l~a~l~~a~~~v~~kk~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (427)
+..+++++.+..+-..++-+.-++.+..+ |..........+++.+..+..+.++..... ......+|..+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a--------~~~~~pwW~~~- 74 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA--------AVASAPWWAWI- 74 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh--------hccCCchHHHH-
Confidence 45677888888888888888888876665 777777777788887777666654332211 11111122211
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHH-HHHHHHHHHHHhcC----CccchhhHHHHHHHHHHHHHHH
Q 014279 330 WVGMFYHLYNQLATNTLERVAPLTHAVGNVL-KRVFVIGFSILAFG----NKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 330 ~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l-~~v~~i~ls~~~fg----e~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
.|+++..+-........+.++.+....... +-+.+.+++-+=+. .++++..++|.+++++|+++.+
T Consensus 75 -GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 75 -GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred -ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 245555554455566788888777554433 33444555544332 5699999999999999966644
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.43 E-value=0.053 Score=52.66 Aligned_cols=137 Identities=13% Similarity=0.070 Sum_probs=103.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHcc--C-CChHHHHHHHHHHHHHHHH-HHHHhCCCCCC------CCCHHHHHHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKLLI 176 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~--f-~~P~~l~~~r~~~~~l~l~-~~~~~~~~~~~------~~~~~~~~~~~ 176 (427)
.+........+.+....-+++.|.+++. . -+++.+...+--++.+.++ +++....+... ..+.. .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 5567777777777777888888988852 1 1477777777777777666 55443222111 12222 33444
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhcc
Q 014279 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (427)
Q Consensus 177 ~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (427)
..+++..+.+...++.+.++++-++++.....=+++.+.++++++++.+..+.+|.+++++|+.+...
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 55577888899999999999999999999999999999999999999999999999999999998764
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.32 E-value=0.23 Score=39.24 Aligned_cols=46 Identities=22% Similarity=0.176 Sum_probs=25.3
Q ss_pred HHHhhccChhH-HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHH
Q 014279 343 TNTLERVAPLT-HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 388 (427)
Q Consensus 343 ~~~l~~~sa~~-~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lv 388 (427)
.+++++.+... +++..-+..+...+.|+++|||++|+.+++|.+++
T Consensus 47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 35667766544 36666678889999999999999999999999875
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.22 E-value=0.05 Score=44.46 Aligned_cols=70 Identities=21% Similarity=0.356 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhh
Q 014279 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (427)
Q Consensus 172 ~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii-~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~ 242 (427)
+++.++.. ++-.+...+++.+...+.|.+.-+ +++.=+||++.++++.+|..+++.++|++++++|+.+.
T Consensus 42 ~~y~ipf~-lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFL-LNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 45555543 355677788999999999997777 69999999999988888888999999999999999763
No 95
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.16 E-value=0.75 Score=39.55 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=78.7
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH-
Q 014279 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT- 201 (427)
Q Consensus 125 ~~~~K~~~~~f~~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~- 201 (427)
+-.|-++-+....|+.-+++-+.++.+++.+....+ .+.++.. ++.-++....|++.+.....+......+.+..+
T Consensus 21 ~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t~ 99 (150)
T COG3238 21 AAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATTI 99 (150)
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHHH
Confidence 345566665566799999999999888776544332 2222221 222234445567777777777777777766554
Q ss_pred HHHHhhhHHHHHHHHHHHh----CcccChhhHHHHHHHHhhhhhhc
Q 014279 202 HTIKALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 202 ~ii~s~~Pv~~~il~~l~l----~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
.++.+-+.+..+++..+=+ +++++..+++++++.++|+.++.
T Consensus 100 ~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 100 ALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 4556777888888876543 36889999999999999965543
No 96
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.12 E-value=0.59 Score=38.23 Aligned_cols=52 Identities=27% Similarity=0.172 Sum_probs=40.5
Q ss_pred HHHhhccChhH-HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHH
Q 014279 343 TNTLERVAPLT-HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 394 (427)
Q Consensus 343 ~~~l~~~sa~~-~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~l 394 (427)
+..+++.+-.. .-+.|.+.-+++++.++++.+|..+...++|+++++.|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34555555433 34457788899999999888888999999999999999864
No 97
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.72 E-value=0.072 Score=52.04 Aligned_cols=74 Identities=11% Similarity=0.137 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014279 328 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (427)
Q Consensus 328 l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~~ 401 (427)
-+..+.+-|+.|+....+++.++.....++.....+++..++.++-+|++|+..+++..+.++|+++.+..+.+
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~ 235 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSK 235 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccc
Confidence 34456777788888889999999999999999999999999999999999999999999999999987765443
No 98
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.34 E-value=5.9 Score=38.76 Aligned_cols=141 Identities=14% Similarity=0.119 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHH-HHHHHHHHHHHHHHH-hccchhhhccchhhhhhhchHHHHHHH
Q 014279 251 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAY-ISIIALFVCIPPAII-VEGPQLIKHGLSDAISKVGMVKFISDL 328 (427)
Q Consensus 251 ~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (427)
..|+++..++++|.+.+.+=.||. ++. .+|.++. +.+++ -+.+|.... +.-|++. +.+.......+ ...
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~W-sWEs~Wlv~gi~s-wli~P~~~a~l~ip~~~-----~i~~~~~~~~l-~~~ 76 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KGW-SWESYWLVQGIFS-WLIVPWLWALLAIPDFF-----SIYSATPASTL-FWT 76 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CCc-cHHHHHHHHHHHH-HHHHHHHHHHHhCCcHH-----HHHHhCChhHH-HHH
Confidence 579999999999999998888877 333 2333333 33333 334444332 2333322 11222221111 122
Q ss_pred HHHHHHHHHHHHHHHHHhhccCh-hHHHHHHHHHHHHHHHHHHHh-------cCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 329 FWVGMFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSILA-------FGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 329 ~~~gv~~~~~~~~~~~~l~~~sa-~~~sv~~~l~~v~~i~ls~~~-------fge~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
++.|++--..+...=..+++.+- +..++.--+-.++..++--++ ++++-....++|.+++++|+.+..+...
T Consensus 77 ~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 77 FLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred HHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence 22222221112111123333332 222333223333333332223 2333456789999999999998876643
No 99
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.90 E-value=0.33 Score=44.50 Aligned_cols=73 Identities=15% Similarity=0.179 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhh
Q 014279 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (427)
Q Consensus 170 ~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~ 242 (427)
..+..+.+.+++..+++.+.+.-..+-++-+-+++..+--+|+.++++++++..++.+||++.++++.|...=
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 4567788899999999999999888888777788888899999999999999999999999999999987753
No 100
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=89.51 E-value=0.12 Score=47.69 Aligned_cols=132 Identities=10% Similarity=0.117 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHH
Q 014279 253 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (427)
Q Consensus 253 G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (427)
+++.+++=++.|+.-.....|... +|.+.+.=+.+ +++......+++..|.. . ...+..-+.+|
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG--~p~qQ~lGtT~-GALifaiiv~~~~~p~~------------T-~~~~iv~~isG 66 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG--KPYQQTLGTTL-GALIFAIIVFLFVSPEL------------T-LTIFIVGFISG 66 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC--ChhHhhhhccH-HHHHHHHHHheeecCcc------------c-hhhHHHHHHhh
Confidence 567788888999887766665532 33333222233 33333333333332222 1 12244455567
Q ss_pred HHHHHHHHHHHHHhhccChhHHHH-HHHHHHHHHHHHHHHhcCCccchhhH----HHHHHHHHHHHHHHHHHH
Q 014279 333 MFYHLYNQLATNTLERVAPLTHAV-GNVLKRVFVIGFSILAFGNKISTQTG----IGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 333 v~~~~~~~~~~~~l~~~sa~~~sv-~~~l~~v~~i~ls~~~fge~ls~~~~----iG~~lvl~Gv~ly~~~~~ 400 (427)
.+-...|..++++.+..+...+.. .+-++-|-+-++++++|||--++.++ +..++++.|+.+.++.++
T Consensus 67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 777778888888888776655543 34467788899999999999887764 456677788877666544
No 101
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=88.45 E-value=2.8 Score=33.54 Aligned_cols=31 Identities=13% Similarity=0.128 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCccchhhHHHHHHHHHHHHH
Q 014279 364 FVIGFSILAFGNKISTQTGIGTVIAIAGVAA 394 (427)
Q Consensus 364 ~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~l 394 (427)
+-+.+++++++|+++|.++.|.++++++++.
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 3356889999999999999999999988753
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.49 E-value=22 Score=34.42 Aligned_cols=131 Identities=16% Similarity=0.128 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-h--hhHHHHHHHHHHHHHHHHHHH--hccchhhhccchhhhhhhchHHHHHH
Q 014279 253 GFISAMISNISFTYRSIYSKKAMTDMD-S--TNIYAYISIIALFVCIPPAII--VEGPQLIKHGLSDAISKVGMVKFISD 327 (427)
Q Consensus 253 G~~l~l~a~l~~a~~~v~~kk~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
....++.-+++.-+-.+..|.....++ | ..++.+|++.+.+.....-.. .+.+.+ .+.. .+-|.
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l---~~~~-------~kk~~- 81 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL---DLRT-------AKKWF- 81 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc---ChHH-------HHHHc-
Confidence 344455555555566677787776654 3 344558888887766543322 122211 1111 11111
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 328 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 328 l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
-..++.++..+...+.+++.+--.+.++..+.++++.+...++|+..++...+.....+++|...+.
T Consensus 82 --P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 82 --PVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred --cHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 1123333344455578899999999999999999999999999999999999999999999877543
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=85.72 E-value=0.41 Score=42.76 Aligned_cols=62 Identities=18% Similarity=0.300 Sum_probs=54.1
Q ss_pred HHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHHHH
Q 014279 338 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 338 ~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
.||....++++.+|...+-....+..+..+++++++|+++....++..++.+.|+....+..
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 45666688899999999999999999999999999999999999999999999987655443
No 104
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.30 E-value=15 Score=28.95 Aligned_cols=31 Identities=10% Similarity=0.135 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCccchhhHHHHHHHHHHHHH
Q 014279 364 FVIGFSILAFGNKISTQTGIGTVIAIAGVAA 394 (427)
Q Consensus 364 ~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~l 394 (427)
+-+.+|+++++|++.|.++.|..++.+|+..
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 3355899999999999999999999998865
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=83.03 E-value=28 Score=32.07 Aligned_cols=74 Identities=11% Similarity=0.043 Sum_probs=63.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhh
Q 014279 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (427)
Q Consensus 168 ~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l 241 (427)
+.+.+..++.-|++..+-.++.-|++.-++..++.++.++.-....+.+.+++++..+...+.++++++...++
T Consensus 220 ~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 220 SVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred ChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 34556678888888888899999999999999999999999999999999999999999998888776654443
No 106
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.24 E-value=16 Score=34.60 Aligned_cols=121 Identities=12% Similarity=0.092 Sum_probs=73.6
Q ss_pred HHHHHHHccCCCh-HHHHHHHHHHHHHHHHHHH-HhCC--CCC---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccch
Q 014279 126 ILNKRIYNYFPYP-YFVSVIHLLVGVVYCLVSW-AVGL--PKR---APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV 198 (427)
Q Consensus 126 ~~~K~~~~~f~~P-~~l~~~r~~~~~l~l~~~~-~~~~--~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~ 198 (427)
-++++.++.++.+ ..+.++...++.++++... ..+. +.. ..-+.+.....+..+....++..+.-.=.+.-.+
T Consensus 207 NvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA 286 (367)
T KOG1582|consen 207 NVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGA 286 (367)
T ss_pred HHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhch
Confidence 3566777766644 5666666666666554322 2221 000 0112233444444444444444333333333456
Q ss_pred hHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccCC
Q 014279 199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (427)
Q Consensus 199 s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~ 246 (427)
.++.++...-=-.+.+++++++.+.++.....+..+++.|+.+=...+
T Consensus 287 ~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 287 LIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 666666666677889999999999999999999999999999866544
No 107
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=77.79 E-value=1.8 Score=41.41 Aligned_cols=137 Identities=12% Similarity=0.027 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHH-HHhc--cch-hhhccchhhhhhhchHHHHHHHHHHHH
Q 014279 258 MISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA-IIVE--GPQ-LIKHGLSDAISKVGMVKFISDLFWVGM 333 (427)
Q Consensus 258 l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gv 333 (427)
+++.+||+.....+|-.-++-...+..++=..++.++...+. +-++ ++. ....++.+.+.+..++.+ ...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv-~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSV-LFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHH-HHHHHhhH
Confidence 457788888777777554332222334444444443332222 2221 110 111223333334444443 44555677
Q ss_pred HHHHHHHHHHHHhhccChhHHHH-HHHHHHHHHHHHHHHhcCCccc--hhhHHHHHHHHHHHHHHH
Q 014279 334 FYHLYNQLATNTLERVAPLTHAV-GNVLKRVFVIGFSILAFGNKIS--TQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv-~~~l~~v~~i~ls~~~fge~ls--~~~~iG~~lvl~Gv~ly~ 396 (427)
+.-+.|+...+.+...+-...-+ ...+.-|+.+++-++ .+.+.+ ..-+.|.+++++.+++-.
T Consensus 81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 77777776555555444322211 111222333333332 244444 356678888888887644
No 108
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=75.63 E-value=21 Score=34.03 Aligned_cols=138 Identities=12% Similarity=0.071 Sum_probs=72.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHccCC-ChHHHHHHHHHHHHHHHHHH-------H--HhCCC-----CCCCCCHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVS-------W--AVGLP-----KRAPIDSKL 171 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~-~P~~l~~~r~~~~~l~l~~~-------~--~~~~~-----~~~~~~~~~ 171 (427)
++..+.+..+-.+.+..+.++++..++.+. +|=...++--+...-..+++ + ..+.+ .....-+..
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~ 241 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSM 241 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHH
Confidence 444444555556667777889999998743 56444444332222211111 0 00000 000001223
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhcc
Q 014279 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (427)
Q Consensus 172 ~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (427)
|.+++...+.+....--.|.=-..++.=+.++...+-=++..+++.+.++..++++.|+|.+++++|..+...
T Consensus 242 ~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 242 WVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3333333333322111111111112333344555566778888999999999999999999999999998753
No 109
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.35 E-value=1.9 Score=41.56 Aligned_cols=119 Identities=15% Similarity=0.120 Sum_probs=78.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHH
Q 014279 248 SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISD 327 (427)
Q Consensus 248 ~~~~~G~~l~l~a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
..+..|.++++.++++.+...++.||-..+......- .-+++ .. ....+.+|..
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r----------------a~~gg------~~----yl~~~~Ww~G 70 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR----------------AGEGG------YG----YLKEPLWWAG 70 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc----------------ccCCC------cc----hhhhHHHHHH
Confidence 3456899999999999998888888876443220000 00110 00 0011122332
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 328 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 328 l~~~gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
++ .-..|=..|+..| ...++...+..+.+..+...+++.++++|++++...+|++++++|..+..
T Consensus 71 ~l-tm~vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 71 ML-TMIVGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HH-HHHHHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 22 2233445555544 67777777788889999999999999999999999999999999987543
No 110
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=66.50 E-value=15 Score=34.97 Aligned_cols=55 Identities=15% Similarity=0.125 Sum_probs=45.8
Q ss_pred HHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHH
Q 014279 342 ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 342 ~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
.|..+..+++..+.+..-...+++-++|..+++.+++..||+|+..+..|+....
T Consensus 103 m~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 103 MYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 3445566777777777777888999999999999999999999999999988543
No 111
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=65.06 E-value=1.5e+02 Score=29.28 Aligned_cols=224 Identities=15% Similarity=0.167 Sum_probs=122.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhcccchhH-HHHHHhhhHHHHHHHHHHHhCc-------ccChhhHHHHHHHHhhh
Q 014279 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF-THTIKALEPFFNAAASQFILGQ-------QLPLTLWLSLAPVVIGV 239 (427)
Q Consensus 168 ~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~-~~ii~s~~Pv~~~il~~l~l~e-------r~~~~~~l~l~l~~~Gv 239 (427)
+.+.+....+.|++...+...+-.+.+|+.++. ..+...++-++-.++-.++.++ +-....++++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 345666777888888888888888999987776 3344555556666665555442 33456789999999999
Q ss_pred hhhccC----C-------ccchH-HHHHHHHHHHHHHHHHHHHHHHhh--------cCCChh----hHHHHHHHHHHHHH
Q 014279 240 SMASLT----E-------LSFNW-TGFISAMISNISFTYRSIYSKKAM--------TDMDST----NIYAYISIIALFVC 295 (427)
Q Consensus 240 ~l~~~~----~-------~~~~~-~G~~l~l~a~l~~a~~~v~~kk~~--------~~~~~~----~~~~~~~~~~~~~~ 295 (427)
++.... | .++|+ .|++.++++.+..|..++-.+.-. ...+++ ........-+.+.-
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN 228 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITN 228 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHH
Confidence 987431 1 13443 799999999998888877443221 123332 11122222233333
Q ss_pred HHHHHHhc-c-chhhhccchhhhhhhchHHHHHHHHHHHHHHHHHH-HHHHHH--hhc----cChhHHHHHHHHHHHHHH
Q 014279 296 IPPAIIVE-G-PQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN-QLATNT--LER----VAPLTHAVGNVLKRVFVI 366 (427)
Q Consensus 296 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~-~~~~~~--l~~----~sa~~~sv~~~l~~v~~i 366 (427)
+.+.++.. . .... ...|. ....+.+....+.+.+.+.++. ++.++. -.+ .+.....+.+.+..+++-
T Consensus 229 ~~yc~~~l~~~k~~s--~~~d~--~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~sn 304 (344)
T PF06379_consen 229 LIYCLILLAKNKNWS--WKGDY--SVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSN 304 (344)
T ss_pred HHHHHHHHhhcCCCc--ccccc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHH
Confidence 44433321 1 1110 00010 0001112223333333332222 122222 222 335566777888888888
Q ss_pred HHHHHhcCC------ccchhhHHHHHHHHHHHHHHH
Q 014279 367 GFSILAFGN------KISTQTGIGTVIAIAGVAAYS 396 (427)
Q Consensus 367 ~ls~~~fge------~ls~~~~iG~~lvl~Gv~ly~ 396 (427)
+.+. +++| +.-..-++|.++++.++.+..
T Consensus 305 vwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 305 VWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred HHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 8887 4544 222345788888888776654
No 112
>COG5373 Predicted membrane protein [Function unknown]
Probab=64.44 E-value=2.3e+02 Score=31.30 Aligned_cols=27 Identities=4% Similarity=0.005 Sum_probs=20.2
Q ss_pred hhhcccchhHHHHHHhhhHHHHHHHHH
Q 014279 191 VSFAAVAVSFTHTIKALEPFFNAAASQ 217 (427)
Q Consensus 191 ~al~~~~~s~~~ii~s~~Pv~~~il~~ 217 (427)
.=+.+++.+.+-.+..+.-+.++.++.
T Consensus 219 ~iyd~i~pgaAf~LL~lIs~~t~~LAl 245 (931)
T COG5373 219 GIYDLIGPGAAFALLVLISLATIGLAL 245 (931)
T ss_pred cccccCChhHHHHHHHHHHHHHHHHHH
Confidence 334568888888888888888888773
No 113
>PRK02237 hypothetical protein; Provisional
Probab=64.22 E-value=12 Score=30.17 Aligned_cols=39 Identities=10% Similarity=0.030 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 207 ~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
...+...+..+.+-|+|+++++++|..++++|+.++.+.
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 344555677888999999999999999999999987654
No 114
>PRK02237 hypothetical protein; Provisional
Probab=63.77 E-value=13 Score=30.07 Aligned_cols=44 Identities=18% Similarity=0.106 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 354 ~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
++..+-+-.+.+++..+.+-|++++...++|..++++|+.+..+
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 35556667788899999999999999999999999999976544
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=61.10 E-value=13 Score=29.92 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 207 ~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
...+...+..+.+-|++|+++++++..++++|+.++...
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 345566777888899999999999999999999987654
No 116
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=61.08 E-value=2.3 Score=39.70 Aligned_cols=66 Identities=14% Similarity=0.094 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 332 gv~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
+++-.-.|++..++.++++-+.......-..++..+++|++++.+-.+.++.|.+++++|+.....
T Consensus 85 a~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~ 150 (336)
T KOG2766|consen 85 AFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF 150 (336)
T ss_pred eEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence 444444566556677888888888888888999999999999999999999999999999876443
No 117
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=59.11 E-value=15 Score=29.55 Aligned_cols=70 Identities=17% Similarity=0.223 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchhHHH-HHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhh
Q 014279 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (427)
Q Consensus 172 ~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~-ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~ 242 (427)
|.+++|..+ .-.+..++++-+++.+.+.+. +-.++.-.|+.+++..+--|....+.++|..++++|+.+.
T Consensus 53 w~Y~iPFll-NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLL-NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHH-HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 344555443 345567888888888877654 4467788899999977655566788899999999998764
No 118
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=58.85 E-value=13 Score=29.86 Aligned_cols=44 Identities=23% Similarity=0.157 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHHH
Q 014279 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (427)
Q Consensus 354 ~sv~~~l~~v~~i~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~ 397 (427)
++..+-+-.+.+++.++.+-|++++...++|..+++.|+.+..+
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 35556667788999999999999999999999999999986543
No 119
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=58.84 E-value=1.8e+02 Score=28.28 Aligned_cols=50 Identities=20% Similarity=0.268 Sum_probs=40.2
Q ss_pred hcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhh
Q 014279 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (427)
Q Consensus 193 l~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~ 242 (427)
+..++.-+.++..--.-+.+.+++..+++++++...|+|+.+...|+..-
T Consensus 264 l~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 264 LSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred eeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 34455555555555667888999999999999999999999999999876
No 120
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=55.87 E-value=2.7e+02 Score=29.31 Aligned_cols=27 Identities=19% Similarity=-0.058 Sum_probs=14.8
Q ss_pred hhccChhHHHHHHHHHHHHHHHHHHHh
Q 014279 346 LERVAPLTHAVGNVLKRVFVIGFSILA 372 (427)
Q Consensus 346 l~~~sa~~~sv~~~l~~v~~i~ls~~~ 372 (427)
..|+.+....+.....++-..+.|.+.
T Consensus 341 ~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 341 RGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344545555555555666666666544
No 121
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=55.73 E-value=2e+02 Score=27.76 Aligned_cols=119 Identities=13% Similarity=0.042 Sum_probs=56.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHccCCChHH-HHHHHHHHH---HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYF-VSVIHLLVG---VVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH 182 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~-l~~~r~~~~---~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (427)
......+..+-......+.++.++++. |++ +.+.++..+ .+++........+++.....+.+..++..+++.
T Consensus 102 i~~tF~~ssIlLl~~Siss~iG~YiLa----pl~~~i~~~~gAaila~iviP~~~~y~ln~~~~s~~~~R~~ll~~a~~Q 177 (299)
T PF05884_consen 102 IVETFSWSSILLLGFSISSFIGGYILA----PLFGIIFGPFGAAILAYIVIPLIAYYYLNKEDGSLAESRLALLFFALFQ 177 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhcchhHHHHHHHHHHHHHHhhcccccCchHHHHHHHHHHHHHH
Confidence 444444444444444556677788874 532 222233222 111111222233332222233333455556666
Q ss_pred HHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHH
Q 014279 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233 (427)
Q Consensus 183 ~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~ 233 (427)
.+-.+ .+++|.... ..=+..++|+++.+.-.++.++.-++.+.++.+
T Consensus 178 GvL~G---a~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~~lLg~~ 224 (299)
T PF05884_consen 178 GVLVG---AGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQKLLGIV 224 (299)
T ss_pred HHHHH---HHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 53333 333333333 245566778888777777776644555555443
No 122
>PRK10263 DNA translocase FtsK; Provisional
Probab=53.89 E-value=4.3e+02 Score=31.13 Aligned_cols=17 Identities=24% Similarity=0.172 Sum_probs=8.1
Q ss_pred HHHHHHhhhhhcccchh
Q 014279 183 ALGHVTSNVSFAAVAVS 199 (427)
Q Consensus 183 ~l~~~l~~~al~~~~~s 199 (427)
++...+..+++...+.+
T Consensus 34 AlfL~lALiSYsPsDPS 50 (1355)
T PRK10263 34 AVWLMAALLSFNPSDPS 50 (1355)
T ss_pred HHHHHHHHHhCCccCCc
Confidence 34444455555555543
No 123
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=53.63 E-value=1.4e+02 Score=30.55 Aligned_cols=124 Identities=13% Similarity=0.088 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHhhcCCChhhHHHHHHHHHHHHHHHHHHHhccchhhhccchhhhhhhchHHHHHHHHHHHHHHHHHH
Q 014279 260 SNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN 339 (427)
Q Consensus 260 a~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~ 339 (427)
-.+.|++...+...+.++.+|-..+....+.+.+..+.+.+.. .+ ..+.....++|.+.-...
T Consensus 73 f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~---s~--------------~~~~~l~~lng~fQg~Gw 135 (448)
T COG2271 73 FSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP---SL--------------FLFAVLWVLNGWFQGMGW 135 (448)
T ss_pred HHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh---HH--------------HHHHHHHHHHHHHhcCCC
Confidence 3455666655666565677777776666666666555443211 00 111222333343322111
Q ss_pred H------HHHHHhhc------cChhHHHHHHHHHHHHHHHHHHHhcCC-ccchhhHHHHHHHHHHHHHHHHHHHH
Q 014279 340 Q------LATNTLER------VAPLTHAVGNVLKRVFVIGFSILAFGN-KISTQTGIGTVIAIAGVAAYSYIKAQ 401 (427)
Q Consensus 340 ~------~~~~~l~~------~sa~~~sv~~~l~~v~~i~ls~~~fge-~ls~~~~iG~~lvl~Gv~ly~~~~~~ 401 (427)
- ..++.-+. +=...+++.+.+-+.++.+ +++.++- --...-.-|++.++.|+.++...|.+
T Consensus 136 pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 136 PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1 11111111 1234567777777766655 5555543 23333556777777888877765543
No 124
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=52.88 E-value=20 Score=24.38 Aligned_cols=27 Identities=7% Similarity=0.197 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhhh
Q 014279 383 IGTVIAIAGVAAYSYIKAQMEEEKRVS 409 (427)
Q Consensus 383 iG~~lvl~Gv~ly~~~~~~~~~~~~~~ 409 (427)
+-..+++.|++++.+.++++++-++.+
T Consensus 16 v~~~~~F~gi~~w~~~~~~k~~~e~aa 42 (49)
T PF05545_consen 16 VLFFVFFIGIVIWAYRPRNKKRFEEAA 42 (49)
T ss_pred HHHHHHHHHHHHHHHcccchhhHHHHH
Confidence 344566778888888766544433333
No 125
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=48.69 E-value=16 Score=26.61 Aligned_cols=23 Identities=22% Similarity=0.197 Sum_probs=17.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Q 014279 380 QTGIGTVIAIAGVAAYSYIKAQM 402 (427)
Q Consensus 380 ~~~iG~~lvl~Gv~ly~~~~~~~ 402 (427)
.-++++++++.|..+|....++.
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 45688899999999998766543
No 126
>PRK10655 potE putrescine transporter; Provisional
Probab=47.41 E-value=3.2e+02 Score=27.66 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhH
Q 014279 380 QTGIGTVIAIAGVAAYSYIKAQMEE 404 (427)
Q Consensus 380 ~~~iG~~lvl~Gv~ly~~~~~~~~~ 404 (427)
....|..+.+.|..+|....+|.+.
T Consensus 409 ~~~~~~~~~~~g~~~y~~~~~~~~~ 433 (438)
T PRK10655 409 AMLYGSIVTFLGWTLYGLISPRFEL 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4466889999999999775554443
No 127
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=45.72 E-value=26 Score=28.01 Aligned_cols=38 Identities=16% Similarity=0.057 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhccC
Q 014279 208 EPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (427)
Q Consensus 208 ~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (427)
..+...+..+++-|++++++++.+.++.++|+.++...
T Consensus 68 yI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 68 YIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 34455666777889999999999999999999887654
No 128
>PHA03049 IMV membrane protein; Provisional
Probab=45.15 E-value=18 Score=26.31 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Q 014279 380 QTGIGTVIAIAGVAAYSYIKAQME 403 (427)
Q Consensus 380 ~~~iG~~lvl~Gv~ly~~~~~~~~ 403 (427)
.-++++++++.|..+|...+++..
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk~~ 28 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKKTT 28 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc
Confidence 456788889999999987765543
No 129
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=43.24 E-value=56 Score=21.75 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=5.6
Q ss_pred HHHHHHHHHHH
Q 014279 390 AGVAAYSYIKA 400 (427)
Q Consensus 390 ~Gv~ly~~~~~ 400 (427)
.|..+|+..++
T Consensus 21 iGl~IyQkikq 31 (49)
T PF11044_consen 21 IGLSIYQKIKQ 31 (49)
T ss_pred HHHHHHHHHHH
Confidence 34455665543
No 130
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=43.06 E-value=4.1e+02 Score=27.71 Aligned_cols=17 Identities=12% Similarity=0.020 Sum_probs=10.1
Q ss_pred ChhhHHHHHHHHHHHHH
Q 014279 279 DSTNIYAYISIIALFVC 295 (427)
Q Consensus 279 ~~~~~~~~~~~~~~~~~ 295 (427)
.|...+..+.+++.++.
T Consensus 330 ~P~~a~~~~~~i~~l~~ 346 (507)
T TIGR00910 330 VPVPLVIIQGIITSIAG 346 (507)
T ss_pred CcHHHHHHHHHHHHHHH
Confidence 46666666666665543
No 131
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=41.16 E-value=8.9 Score=36.32 Aligned_cols=63 Identities=10% Similarity=0.085 Sum_probs=0.0
Q ss_pred cchhHHHHHHhhhHHHHHHHH-HHHhCcc-cChhhHHHHHHHHhhhhhhccCCc--cchHHHHHHHH
Q 014279 196 VAVSFTHTIKALEPFFNAAAS-QFILGQQ-LPLTLWLSLAPVVIGVSMASLTEL--SFNWTGFISAM 258 (427)
Q Consensus 196 ~~~s~~~ii~s~~Pv~~~il~-~l~l~er-~~~~~~l~l~l~~~Gv~l~~~~~~--~~~~~G~~l~l 258 (427)
.+-+..+++.+...+.++|+- .+++|+| +-..-.++++++++-..+...-.. +.-+.|+++.+
T Consensus 47 ~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~ 113 (381)
T PF05297_consen 47 LTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILF 113 (381)
T ss_dssp -------------------------------------------------------------------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 333444455555444444333 3334544 456667777777766666554332 22245654433
No 132
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=41.15 E-value=1.9e+02 Score=23.33 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhh
Q 014279 209 PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (427)
Q Consensus 209 Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~ 242 (427)
...-+.++.+++||++++....+.+.+++++.++
T Consensus 73 L~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 73 LVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3444667788999999999999998888877653
No 133
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.14 E-value=75 Score=30.37 Aligned_cols=131 Identities=10% Similarity=0.018 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHH-HHHHHHHccCC-ChHHHHHHHHHHHHHHHHHHHHhCC-----CCCCCC-CHHHHHHHHHHHHHHHH
Q 014279 113 FFFMWYFLNVIFN-ILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGL-----PKRAPI-DSKLLKLLIPVAVCHAL 184 (427)
Q Consensus 113 ~~~~w~~~~~~~~-~~~K~~~~~f~-~P~~l~~~r~~~~~l~l~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~l 184 (427)
...+|-.+....+ +..|+.+.... .=|.++++.-+.+.++.++...... ...+.. ..+.|..+.+.|++++.
T Consensus 188 ifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~ 267 (347)
T KOG1442|consen 188 IFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFA 267 (347)
T ss_pred HHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHH
Confidence 3344433333433 55565553322 2378888888888776665443221 111112 34456666667777666
Q ss_pred HHHHhhhhhcccchhHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 185 ~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
..+...+=.+.+++=+..+-....-..=.+++..+++|.-+...|-+.++++.|.....
T Consensus 268 mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 268 MGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred hhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 66666666677776666666666666777888899999888888888888777766554
No 134
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=38.32 E-value=3e+02 Score=24.81 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=21.7
Q ss_pred HHHHHhcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 367 GFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 367 ~ls~~~fge~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
.+|..+|++-.=+..++|..+.++=+......++
T Consensus 134 ~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~ 167 (198)
T PRK06638 134 AIGILLFTDYLLPFELASVLLLVAMVGAIVLARR 167 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4466677777778888888777655444444443
No 135
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=35.69 E-value=51 Score=25.43 Aligned_cols=25 Identities=16% Similarity=0.242 Sum_probs=20.9
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 376 KISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 376 ~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
.+++.+++|.+++++|..+|...+.
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~ 28 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFF 28 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999975443
No 136
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=35.12 E-value=5.3e+02 Score=26.70 Aligned_cols=23 Identities=17% Similarity=0.086 Sum_probs=19.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHH
Q 014279 377 ISTQTGIGTVIAIAGVAAYSYIK 399 (427)
Q Consensus 377 ls~~~~iG~~lvl~Gv~ly~~~~ 399 (427)
++..|++++.++++|++++.+.+
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999999999987765544
No 137
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.26 E-value=2.3e+02 Score=23.04 Aligned_cols=39 Identities=13% Similarity=-0.000 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhcC-CccchhhHHHHHHHHHHHHHHHHHHH
Q 014279 362 RVFVIGFSILAFG-NKISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 362 ~v~~i~ls~~~fg-e~ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
.++.++++|++=+ -.-+++.+|+..|+=.|....+..++
T Consensus 56 ilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~Rs 95 (116)
T COG5336 56 ILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVLRS 95 (116)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556664322 11345555555555444444454433
No 138
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=32.90 E-value=3.6e+02 Score=24.09 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=26.2
Q ss_pred hhHHHHHHHH---HHHhCcccChhhHHHHHHHHhhhhhhccCC
Q 014279 207 LEPFFNAAAS---QFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (427)
Q Consensus 207 ~~Pv~~~il~---~l~l~er~~~~~~l~l~l~~~Gv~l~~~~~ 246 (427)
..|....+++ ++++-.|.+++-.+.+.-.+.|+.....+.
T Consensus 37 ~~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G~ 79 (189)
T TIGR02185 37 FSPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGLLFFLMGM 79 (189)
T ss_pred HHHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHHHHHHHcc
Confidence 4455555554 234567888887788888888887665444
No 139
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=32.80 E-value=58 Score=25.28 Aligned_cols=17 Identities=18% Similarity=0.245 Sum_probs=11.1
Q ss_pred hhhHHHHHHHHHHHHHH
Q 014279 379 TQTGIGTVIAIAGVAAY 395 (427)
Q Consensus 379 ~~~~iG~~lvl~Gv~ly 395 (427)
...++|..+.+.|..++
T Consensus 4 ~~Fl~~l~lliig~~~~ 20 (92)
T PF13038_consen 4 ILFLVGLILLIIGGFLF 20 (92)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44567777777776644
No 140
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=32.18 E-value=47 Score=22.62 Aligned_cols=25 Identities=8% Similarity=0.155 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHhhh
Q 014279 384 GTVIAIAGVAAYSYIKAQMEEEKRV 408 (427)
Q Consensus 384 G~~lvl~Gv~ly~~~~~~~~~~~~~ 408 (427)
-..++++|+++|.+.++++++-.+.
T Consensus 18 ~~~~~Figiv~wa~~p~~k~~f~ea 42 (48)
T cd01324 18 YLALFFLGVVVWAFRPGRKKAFDEA 42 (48)
T ss_pred HHHHHHHHHHHHHhCCCcchhHHHH
Confidence 3578899999999887655544433
No 141
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=32.08 E-value=7.4e+02 Score=27.49 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=32.7
Q ss_pred hHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHhhhhhhc
Q 014279 199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 199 s~~~ii~s~~Pv~~~il~~l~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (427)
+-+.++..+.|+-.+.++.+...+|.+...+.+.+..++|.+.+.
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~~ 55 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISIQ 55 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhC
Confidence 344667888999999999888777765555667777777776543
No 142
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=30.81 E-value=4e+02 Score=24.01 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=30.0
Q ss_pred CcccChhhHHHHHHHHhhhhhhcc------C-CccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014279 221 GQQLPLTLWLSLAPVVIGVSMASL------T-ELSFNWTGFISAMISNISFTYRSIYSKKA 274 (427)
Q Consensus 221 ~er~~~~~~l~l~l~~~Gv~l~~~------~-~~~~~~~G~~l~l~a~l~~a~~~v~~kk~ 274 (427)
++|.+.++.+.+.++...+.++.. . .....+-+....+++++.++++..+.||+
T Consensus 141 ~~r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 141 KKRPSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKY 201 (206)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 356666665554444433333211 1 11112335667788888899887777765
No 143
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=30.75 E-value=71 Score=22.95 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 014279 382 GIGTVIAIAGVAAYSYIKAQMEEEKRVSI 410 (427)
Q Consensus 382 ~iG~~lvl~Gv~ly~~~~~~~~~~~~~~~ 410 (427)
.+-+.+++.|++++.+.+.++++..+++.
T Consensus 15 t~~~~l~fiavi~~ayr~~~K~~~d~aa~ 43 (60)
T COG4736 15 TIAFTLFFIAVIYFAYRPGKKGEFDEAAR 43 (60)
T ss_pred HHHHHHHHHHHHHHHhcccchhhHHHHhc
Confidence 34456777888888877766555444444
No 144
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=30.33 E-value=1.6e+02 Score=25.69 Aligned_cols=58 Identities=12% Similarity=0.123 Sum_probs=34.7
Q ss_pred HHHhCcccChhhHHHHHH-------HHhhhhhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 014279 217 QFILGQQLPLTLWLSLAP-------VVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKA 274 (427)
Q Consensus 217 ~l~l~er~~~~~~l~l~l-------~~~Gv~l~~~~~~~~~~~G~~l~l~a~l~~a~~~v~~kk~ 274 (427)
..+.|..|++++.+|+.+ ++.|+++....+...-.-..+.++.+++.+++-.++...+
T Consensus 90 m~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~i 154 (193)
T COG4657 90 MVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAI 154 (193)
T ss_pred HHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHH
Confidence 344455666666666654 5667777765543322345666777777777766654433
No 145
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=29.16 E-value=6.7e+02 Score=26.03 Aligned_cols=70 Identities=7% Similarity=-0.047 Sum_probs=34.0
Q ss_pred hhhHHHHHHHHHHHhCcccChhhHH--HHHHHHhhhhhhccCCccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014279 206 ALEPFFNAAASQFILGQQLPLTLWL--SLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAM 275 (427)
Q Consensus 206 s~~Pv~~~il~~l~l~er~~~~~~l--~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l~~a~~~v~~kk~~ 275 (427)
.......+++.+-.+.+|+.+++.. +.++.++|-.+.-....+.....+++.+++.+..+..+.+.-.++
T Consensus 281 ~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~ 352 (467)
T COG2211 281 SGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMV 352 (467)
T ss_pred HHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHh
Confidence 3333344355566677777766643 334444444433333333334455555555555555544444333
No 146
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=28.18 E-value=1.6e+02 Score=24.53 Aligned_cols=17 Identities=12% Similarity=-0.105 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014279 354 HAVGNVLKRVFVIGFSI 370 (427)
Q Consensus 354 ~sv~~~l~~v~~i~ls~ 370 (427)
.+...|+-|++.++++.
T Consensus 70 aa~l~Y~lPll~li~g~ 86 (135)
T PF04246_consen 70 AAFLVYLLPLLALIAGA 86 (135)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444455555555554
No 147
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=28.03 E-value=2.6e+02 Score=23.97 Aligned_cols=29 Identities=17% Similarity=0.070 Sum_probs=13.6
Q ss_pred cChhHHHHHHHHHHHHHHHHH-----HHhcCCcc
Q 014279 349 VAPLTHAVGNVLKRVFVIGFS-----ILAFGNKI 377 (427)
Q Consensus 349 ~sa~~~sv~~~l~~v~~i~ls-----~~~fge~l 377 (427)
-+.+..+..-|+-|.+.++++ .++++|.+
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~ 105 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAILAQYLFFSELI 105 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 344444444445554444444 44455543
No 148
>COG2215 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=27.90 E-value=2.5e+02 Score=27.14 Aligned_cols=18 Identities=17% Similarity=0.056 Sum_probs=9.6
Q ss_pred hcCCccchhhHHHHHHHH
Q 014279 372 AFGNKISTQTGIGTVIAI 389 (427)
Q Consensus 372 ~fge~ls~~~~iG~~lvl 389 (427)
-+...-.|.+.++.++++
T Consensus 125 ~~~~s~~~lE~~S~~Ll~ 142 (303)
T COG2215 125 TFALSEPWLELISFLLLI 142 (303)
T ss_pred HHhhhhHHHHHHHHHHHH
Confidence 344444566666655544
No 149
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=27.61 E-value=4.5e+02 Score=23.60 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=35.2
Q ss_pred CcccChhhHHHHHHHHhhhhhhcc-------CCccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 014279 221 GQQLPLTLWLSLAPVVIGVSMASL-------TELSFNWTGFISAMISNISFTYRSIYSKKAM 275 (427)
Q Consensus 221 ~er~~~~~~l~l~l~~~Gv~l~~~-------~~~~~~~~G~~l~l~a~l~~a~~~v~~kk~~ 275 (427)
++|+..++++.+.....-+.++.. .+.+..+--+.+.+++++..|++..+.||..
T Consensus 156 sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~N 217 (226)
T COG4858 156 SQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKN 217 (226)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 467777777766665555554432 1122223456788888999999988888763
No 150
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=26.87 E-value=1.5e+02 Score=24.68 Aligned_cols=39 Identities=21% Similarity=0.449 Sum_probs=25.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHccCC-ChHHHHHHH
Q 014279 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIH 145 (427)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~-~P~~l~~~r 145 (427)
.+.+.+++++..+.++.-.++-|.+...++ ||++++-+-
T Consensus 55 ~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlT 94 (130)
T PF08627_consen 55 NFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLT 94 (130)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhc
Confidence 455666666665555555577788777765 888877653
No 151
>COG4147 DhlC Predicted symporter [General function prediction only]
Probab=26.35 E-value=3.4e+02 Score=28.19 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=44.1
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHhc------------CCccchhhHHHHHHHHHHHHHHHHHHHHhhHH
Q 014279 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAF------------GNKISTQTGIGTVIAIAGVAAYSYIKAQMEEE 405 (427)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~i~ls~~~f------------ge~ls~~~~iG~~lvl~Gv~ly~~~~~~~~~~ 405 (427)
..++=..+.++..-.+.+....+.-++++-.++ +-+++...++|+.+-+.+.++.+...+..+++
T Consensus 438 lfWKr~n~~GAi~G~~~GL~~tlv~i~l~~~i~~~~~~~~~~~~~~~~~~~~g~~sipv~F~~~~ivSllt~~~~~~ 514 (529)
T COG4147 438 LFWKRLNTAGAIAGMLLGLIVTLVLIILSPTIWVVILGHPGFGWAGFPYEGPGLFSIPVGFLGAWIVSLLTKPPEED 514 (529)
T ss_pred HHHhhccHHhHHHHHHHHHHHHHHHHHhCccccccccCccccccccCCCCCcchhhhhHHHHHhHheeccCCCCchH
Confidence 334455566777777777766666666665333 34577789999999999999888765544443
No 152
>KOG1289 consensus Amino acid transporters [Amino acid transport and metabolism]
Probab=24.57 E-value=7.2e+02 Score=26.30 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=29.8
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhc--------------CCccchhhHHHHHHHHHHHHHHHHH
Q 014279 349 VAPLTHAVGNVLKRVFVIGFSILAF--------------GNKISTQTGIGTVIAIAGVAAYSYI 398 (427)
Q Consensus 349 ~sa~~~sv~~~l~~v~~i~ls~~~f--------------ge~ls~~~~iG~~lvl~Gv~ly~~~ 398 (427)
..+....+...-+|+..+.+.|.+| ++.+++.-++..++++..+..|-..
T Consensus 446 f~~gp~~lGk~s~p~~~i~v~w~lf~~vil~fP~~~pvT~~~MNya~VV~gg~~lf~li~~~~~ 509 (550)
T KOG1289|consen 446 FRPGPFNLGKFSKPIGIIAVLWVLFMIVILCFPSVYPVTADNMNYACVVYGGVMLFCLIYYFVS 509 (550)
T ss_pred cCCCCccccccccchHHHHHHHHHHHHHHHhCCcccCCCcccCceEEEeehhhhhhhhheeeee
Confidence 6666666666666666666666555 4556666555555555555554433
No 153
>PF12868 DUF3824: Domain of unknwon function (DUF3824); InterPro: IPR024436 This repeating domain is proline-rich but its function is unknown.
Probab=24.53 E-value=1.6e+02 Score=25.05 Aligned_cols=13 Identities=23% Similarity=0.225 Sum_probs=7.3
Q ss_pred hHHHHHHHHHHHH
Q 014279 381 TGIGTVIAIAGVA 393 (427)
Q Consensus 381 ~~iG~~lvl~Gv~ 393 (427)
.+.++.|..+|+.
T Consensus 8 ~la~~aLaAAG~G 20 (137)
T PF12868_consen 8 DLAEAALAAAGAG 20 (137)
T ss_pred HHhHHHHHHHHHH
Confidence 4556666665544
No 154
>PRK02935 hypothetical protein; Provisional
Probab=24.50 E-value=2.7e+02 Score=22.39 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=17.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHH
Q 014279 377 ISTQTGIGTVIAIAGVAAYSYIKA 400 (427)
Q Consensus 377 ls~~~~iG~~lvl~Gv~ly~~~~~ 400 (427)
.+...++|.+.++++..+|-+..-
T Consensus 40 m~ifm~~G~l~~l~S~vvYFwiGm 63 (110)
T PRK02935 40 MTIFMLLGFLAVIASTVVYFWIGM 63 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345567888889988888887654
No 155
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=24.29 E-value=7.8e+02 Score=25.18 Aligned_cols=22 Identities=14% Similarity=0.292 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 014279 380 QTGIGTVIAIAGVAAYSYIKAQ 401 (427)
Q Consensus 380 ~~~iG~~lvl~Gv~ly~~~~~~ 401 (427)
..+.|.++...|+.+|.+.+++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4667889999999888875543
No 156
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.09 E-value=6.1e+02 Score=23.92 Aligned_cols=101 Identities=16% Similarity=0.121 Sum_probs=66.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHhhhHHHHHHHH
Q 014279 137 YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAAS 216 (427)
Q Consensus 137 ~P~~l~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~al~~~~~s~~~ii~s~~Pv~~~il~ 216 (427)
+++++-++.+....+..++...... .+++ ...-++.|.+.+.++.+..-.++.+..+...++=++.-+.+--..
T Consensus 26 Dg~~fQw~~~~~i~~~g~~v~~~~~--~p~f----~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~ 99 (254)
T PF07857_consen 26 DGFFFQWVMCSGIFLVGLVVNLILG--FPPF----YPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWAS 99 (254)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhcC--CCcc----eeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 5777777766665555444333221 1112 223456678888999999999999999999988777555444333
Q ss_pred -HH-HhC---c--ccChhhHHHHHHHHhhhhhhc
Q 014279 217 -QF-ILG---Q--QLPLTLWLSLAPVVIGVSMAS 243 (427)
Q Consensus 217 -~l-~l~---e--r~~~~~~l~l~l~~~Gv~l~~ 243 (427)
.+ +++ | +-+...++|++++++|..+..
T Consensus 100 grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 100 GRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred hhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 22 232 2 345778899999999988763
No 157
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=23.53 E-value=1.1e+02 Score=32.39 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=15.3
Q ss_pred HHHHHHHHHHH---HHHHHHhhcCCChhhHHHH
Q 014279 257 AMISNISFTYR---SIYSKKAMTDMDSTNIYAY 286 (427)
Q Consensus 257 ~l~a~l~~a~~---~v~~kk~~~~~~~~~~~~~ 286 (427)
++.+++|++.. ..+.-|+.+++.-.+++++
T Consensus 409 Gv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~l 441 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSFKLIEKIGHVNVMYL 441 (618)
T ss_pred eehhhhhccchHHHHHHHHHHHHHhcccceeee
Confidence 35566666532 2344455566665554443
No 158
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=23.52 E-value=6.9e+02 Score=24.29 Aligned_cols=45 Identities=29% Similarity=0.295 Sum_probs=33.5
Q ss_pred hhhHHHHHHHHhhhhhhccCCccchHHHHHHHHHHHHHHHHHHHH
Q 014279 226 LTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIY 270 (427)
Q Consensus 226 ~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~a~l~~a~~~v~ 270 (427)
.....+++.+++|.+++.+.+..++++=.++++++++..-....+
T Consensus 18 ~Tl~aai~Pv~~G~a~A~~~~~~f~~~~~ll~Li~~~~iq~~vN~ 62 (303)
T COG1575 18 KTLPAAIAPVIVGTALAFWYGKSFNLLVALLALIAAILLQILVNL 62 (303)
T ss_pred cchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 445688999999999998877788887777777766665544333
No 159
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=22.78 E-value=3.3e+02 Score=25.39 Aligned_cols=18 Identities=11% Similarity=0.071 Sum_probs=11.2
Q ss_pred cchhhHHHHHHHHHHHHH
Q 014279 377 ISTQTGIGTVIAIAGVAA 394 (427)
Q Consensus 377 ls~~~~iG~~lvl~Gv~l 394 (427)
.+.+.|++-++++.|.++
T Consensus 219 ~n~q~wLwwi~~vlG~ll 236 (262)
T KOG4812|consen 219 FNGQYWLWWIFLVLGLLL 236 (262)
T ss_pred cccchHHHHHHHHHHHHH
Confidence 344567777777777664
No 160
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=20.86 E-value=8.5e+02 Score=24.36 Aligned_cols=20 Identities=5% Similarity=0.102 Sum_probs=13.8
Q ss_pred CccchhhHHHHHHHHHHHHH
Q 014279 375 NKISTQTGIGTVIAIAGVAA 394 (427)
Q Consensus 375 e~ls~~~~iG~~lvl~Gv~l 394 (427)
...+..+-+++++++.+++.
T Consensus 161 ~~~~~~~s~~~avv~i~~Y~ 180 (368)
T COG0387 161 GNFSLGQSLFVAVVLIALYG 180 (368)
T ss_pred CcchHhHHHHHHHHHHHHHH
Confidence 44557777788777777664
Done!