BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014282
(427 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1
Length = 436
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/447 (58%), Positives = 326/447 (72%), Gaps = 35/447 (7%)
Query: 1 MENLNMALVSSTSPKLVLNYTNFKHPTRGITGPRRSSSLALPFKLSTSRISASV-RAGP- 58
MENLN+ALVSS P L+L +++ K+ G R+S + F++S + S+ V RA
Sbjct: 1 MENLNLALVSSPKP-LLLGHSSSKNVFSG----RKSFTFGT-FRVSANSSSSHVTRAASK 54
Query: 59 -HQN-----GQVGAGGFASLTSSGGQQTSSVGVNPNLPMPPPSSNVGSPLFWVGVGVGLS 112
HQN G+V A FAS++SS GQ+T+SVGV+P L PPPS+ VGSPLFW+G+GVG S
Sbjct: 55 SHQNLKSVQGKVNAHDFASISSSNGQETTSVGVSPQLSPPPPST-VGSPLFWIGIGVGFS 113
Query: 113 ALFSFVASRLKQYAMQQALKGMMNQMNTQNKPFGNAAFPQGSPFPFPNPPASGPTTP--- 169
ALFS VASR+K+YAMQQA K MM QMNTQN PF + AF G PFPFP P ASGP TP
Sbjct: 114 ALFSVVASRVKKYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFPFPMPSASGPATPAGF 173
Query: 170 ---------YPAASQPRFTMDIPATKVEAAT-ATDVEGKKEVKGETEVKEEPKKYAFVDV 219
+ASQ T+DIPATKVEAA A D+ VK E EVK EPKK AFVDV
Sbjct: 174 AGNQSQATSTRSASQSTVTVDIPATKVEAAAPAPDIN----VKEEVEVKNEPKKSAFVDV 229
Query: 220 SPEETLQKSSFDNFEDVKETSSSKDAQPPKD-SQNGAAFNYNAGSPFGGQSAKKEGRFLT 278
SPEET+QK++F+ F+DV E+SS K+A+ P + SQNG F G S +K L+
Sbjct: 230 SPEETVQKNAFERFKDVDESSSFKEARAPAEASQNGTPFKQGFGDSPSSPSERKSA--LS 287
Query: 279 VDTLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMCESGEFDGR 338
VD LEK+MEDP VQ+MVYP LPEEMRNP++FK M+QNPEYR+QL+ ML+ M E+D R
Sbjct: 288 VDALEKMMEDPTVQQMVYPYLPEEMRNPSTFKWMMQNPEYRQQLEAMLNNMGGGTEWDSR 347
Query: 339 VLDSLKNFDLNSAEVKQQFEQIGLTPEEVITKMMANPEIALGFQSPRVQAAIMECSQNPM 398
++D+LKNFDLNS +VKQQF+QIGL+P+EVI+K+MANP++A+ FQ+PRVQAAIM+CSQNPM
Sbjct: 348 MMDTLKNFDLNSPDVKQQFDQIGLSPQEVISKIMANPDVAMAFQNPRVQAAIMDCSQNPM 407
Query: 399 NIIKYQNDKEVMSVITKIAELFPGVTG 425
+I+KYQNDKEVM V KI+ELFPGV+G
Sbjct: 408 SIVKYQNDKEVMDVFNKISELFPGVSG 434
>sp|Q9FMD5|TIC40_ARATH Protein TIC 40, chloroplastic OS=Arabidopsis thaliana GN=TIC40 PE=1
SV=1
Length = 447
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 237/448 (52%), Positives = 302/448 (67%), Gaps = 24/448 (5%)
Query: 1 MENLNMALVSSTSPKLVLNYTNFKHPTRGITG-PRRSSSLALPF-KLSTSRISASVRAGP 58
MENL + S++SPKL++ NF + TG RR+ ++ L K+S S S S + P
Sbjct: 1 MENLTLVSCSASSPKLLIG-CNFTSSLKNPTGFSRRTPNIVLRCSKISASAQSQSPSSRP 59
Query: 59 HQNGQV-----GAGGFASL-TSSGGQQTSSVGVNPNLPMPPPSSNVGSPLFWVGVGVGLS 112
G++ + FAS+ +SS QQT+SV PP SS +GSPLFW+GVGVGLS
Sbjct: 60 ENTGEIVVVKQRSKAFASIFSSSRDQQTTSVASPSVPVPPPSSSTIGSPLFWIGVGVGLS 119
Query: 113 ALFSFVASRLKQYAMQQALKGMMNQMNTQNKPFGNAAFPQGSPFPFPNPPASGPTTPYPA 172
ALFS+V S LK+YAMQ A+K MMNQMNTQN F N+ FP GSPFPFP PP + P +
Sbjct: 120 ALFSYVTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQ 179
Query: 173 ASQPRF--TMDIPATKVEAAT--------ATDVEGKK--EVKGETEVKEEPKKYAFVDVS 220
+ T+D+ ATKVE A D+E K V ++ K+E K YAF D+S
Sbjct: 180 SQSQSSGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDIS 239
Query: 221 PEETLQKSSFDNFEDVKETSSSKDAQPPKDS-QNGA--AFNYNAGSPFGGQSAKKEGRFL 277
PEET ++S F N+ +V ET+S K+ + +D QNGA A A F K G L
Sbjct: 240 PEETTKESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGL 299
Query: 278 TVDTLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMCESGEFDG 337
+V+ LEK+MEDP VQKMVYP LPEEMRNP +FK ML+NP+YR+QLQ+ML+ M SGE+D
Sbjct: 300 SVEALEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDK 359
Query: 338 RVLDSLKNFDLNSAEVKQQFEQIGLTPEEVITKMMANPEIALGFQSPRVQAAIMECSQNP 397
R+ D+LKNFDLNS EVKQQF QIGLTPEEVI+K+M NP++A+ FQ+PRVQAA+MECS+NP
Sbjct: 360 RMTDTLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENP 419
Query: 398 MNIIKYQNDKEVMSVITKIAELFPGVTG 425
MNI+KYQNDKEVM V KI++LFPG+TG
Sbjct: 420 MNIMKYQNDKEVMDVFNKISQLFPGMTG 447
>sp|Q5ZLF0|F10A1_CHICK Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1
Length = 361
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELF 420
+ +++++PE+ Q P V AA + +QNP N+ KYQN+ +VMS+ITK++ F
Sbjct: 305 LNEILSDPEVLAAMQDPEVMAAFQDVAQNPANMSKYQNNPKVMSLITKLSAKF 357
>sp|P50503|F10A1_RAT Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1
Length = 368
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPG 422
+ +++++PE+ Q P V A + +QNP N+ KYQN+ +VM++I+K++ F G
Sbjct: 312 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQNNPKVMNLISKLSAKFGG 366
>sp|P50502|F10A1_HUMAN Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2
Length = 369
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPG 422
+ +++++PE+ Q P V A + +QNP N+ KYQ++ +VM++I+K++ F G
Sbjct: 313 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>sp|Q5RF31|F10A1_PONAB Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1
Length = 369
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPG 422
+ +++++PE+ Q P V A + +QNP N+ KYQ++ +VM++I+K++ F G
Sbjct: 313 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>sp|Q99L47|F10A1_MOUSE Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1
Length = 371
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPG 422
+ +++++PE+ Q P V A + +QNP N+ KYQ++ +VM++I+K++ F G
Sbjct: 315 LNEILSDPEVLAAMQDPEVMVAFQDVAQNPSNMSKYQSNPKVMNLISKLSAKFGG 369
>sp|Q8NFI4|F10A5_HUMAN Putative protein FAM10A5 OS=Homo sapiens GN=ST13P5 PE=5 SV=1
Length = 369
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 368 ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPG 422
+ +++++PE Q P V A + +QNP N+ KYQ++ +VM++I+K++ F G
Sbjct: 313 LNEILSDPEALAAMQDPEVMVAFQDVAQNPANMSKYQSNPKVMNLISKLSAKFGG 367
>sp|Q93YR3|F10AL_ARATH FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670
PE=1 SV=1
Length = 441
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 369 TKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPG 422
+K++ +PE+ F P V AA+ + +NP N+ K+Q + +V VI K+ F G
Sbjct: 386 SKILNDPELMTAFSDPEVMAALQDVMKNPANLAKHQANPKVAPVIAKMMGKFAG 439
>sp|O94489|EF3_SCHPO Elongation factor 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=tef3 PE=1 SV=1
Length = 1047
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 277 LTVDTLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMCESGE-F 335
+ +D + KL+EDPQV V P LP+ + K + +PE R +Q + + G
Sbjct: 273 VIIDNMSKLVEDPQV---VAPFLPKLLPGLYHIKDTIGDPECRSVVQRAITTLERVGNVV 329
Query: 336 DGRV--LDSLKNFDLNSAEVKQQFEQIGL-TPEEVITKMMAN 374
DG++ + + N ++ +K +I + T EEVI K +AN
Sbjct: 330 DGKIPEVSTAANPEVCLETLKAVLGEIKVPTNEEVIAKYVAN 371
>sp|Q5XIR9|UBAC1_RAT Ubiquitin-associated domain-containing protein 1 OS=Rattus
norvegicus GN=Ubac1 PE=2 SV=1
Length = 409
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 301 EEMRNPAS--FKLMLQNPEYRKQLQEMLDGMCESGEFDGRVLDSLK-NFDLNSAEVKQQF 357
EE R+ + FK + + E+R + ++ M E G + V+D+L+ N + +A +
Sbjct: 272 EESRDELTEIFKKIRRKKEFRADARAVISLM-EMGFDEKEVIDALRVNNNQQNAACEWLL 330
Query: 358 EQIGLTPEEV----------ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDK 407
+PEE+ ++ NP + LG +P+ A + +NP+N ++ ND
Sbjct: 331 GDRKPSPEELDQGIDPNSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDP 390
Query: 408 EVMSVITKIAELFPGVTGT 426
E V+ +I+ +F + T
Sbjct: 391 ETGPVMLQISRIFQTLNRT 409
>sp|Q8VDI7|UBAC1_MOUSE Ubiquitin-associated domain-containing protein 1 OS=Mus musculus
GN=Ubac1 PE=2 SV=2
Length = 409
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 301 EEMRNPAS--FKLMLQNPEYRKQLQEMLDGMCESGEFDGRVLDSLK-NFDLNSAEVKQQF 357
EE R+ + FK + + E+R + ++ M E G + V+D+L+ N + +A +
Sbjct: 272 EESRDELTEIFKKIRRKKEFRADARAVISLM-EMGFDEKEVIDALRVNNNQQNAACEWLL 330
Query: 358 EQIGLTPEEV----------ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDK 407
+PEE+ ++ NP + LG +P+ A + +NP+N ++ ND
Sbjct: 331 GDRKPSPEELDQGIDPNSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDP 390
Query: 408 EVMSVITKIAELFPGVTGT 426
E V+ +I+ +F + T
Sbjct: 391 ETGPVMLQISRIFQTLNRT 409
>sp|Q9BSL1|UBAC1_HUMAN Ubiquitin-associated domain-containing protein 1 OS=Homo sapiens
GN=UBAC1 PE=1 SV=1
Length = 405
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 301 EEMRNPAS--FKLMLQNPEYRKQLQEMLDGMCESGEFDGRVLDSLK-NFDLNSAEVKQQF 357
EE R+ + FK + + E+R + ++ M E G + V+D+L+ N + +A +
Sbjct: 268 EEARDELTEIFKKIRRKREFRADARAVISLM-EMGFDEKEVIDALRVNNNQQNAACEWLL 326
Query: 358 EQIGLTPEEV----------ITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDK 407
+PEE+ ++ NP + LG +P+ A + +NP+N ++ ND
Sbjct: 327 GDRKPSPEELDKGIDPDSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDP 386
Query: 408 EVMSVITKIAELFPGVTGT 426
E V+ +I+ +F + T
Sbjct: 387 ETGPVMLQISRIFQTLNRT 405
>sp|Q28DG7|UBAC1_XENTR Ubiquitin-associated domain-containing protein 1 OS=Xenopus
tropicalis GN=ubac1 PE=2 SV=1
Length = 406
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 371 MMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPGVTGT 426
++ NP + LG +P+ A + +NP+N ++ ND E V+ +I+ +F + T
Sbjct: 351 ILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDPETGPVMLQISRIFQTLNRT 406
>sp|P15705|STI1_YEAST Heat shock protein STI1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STI1 PE=1 SV=1
Length = 589
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 363 TPEEVITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVI 413
TPEE + M +PE+A Q P +Q+ + + QNP + ++ + EV I
Sbjct: 526 TPEETYQRAMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKI 576
>sp|Q5ZJI9|UBAC1_CHICK Ubiquitin-associated domain-containing protein 1 OS=Gallus gallus
GN=UBAC1 PE=2 SV=1
Length = 408
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 371 MMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPGVTGT 426
++ NP + LG +P+ A + +NP+N ++ ND E V+ +I+ +F + T
Sbjct: 353 ILENPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDPETGPVMLQISRIFQTLNRT 408
>sp|Q9USI5|STI1_SCHPO Heat shock protein sti1 homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sti1 PE=3 SV=1
Length = 591
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 320 KQLQEMLDGMCESGEFDGRVLDSLKNFDLNSAEVKQQFEQI---------GLTPEEVITK 370
K + +D E+ E D R ++ KN E++ Q + T EE + +
Sbjct: 481 KDYNKCIDACNEASEVDRREPNTGKNL----REIESQLSKCMSAMASQRQNETEEETMAR 536
Query: 371 MMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKI 416
+ +PE+ Q P +QA + + +NP ++++ + V S I K+
Sbjct: 537 IQKDPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKL 582
>sp|Q9UPQ0|LIMC1_HUMAN LIM and calponin homology domains-containing protein 1 OS=Homo
sapiens GN=LIMCH1 PE=1 SV=4
Length = 1083
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 153 GSPFPFPNPPASGPTTPYPAASQPRFTMDIPATKVEAATATDVEGKKEVKGETEVKEEPK 212
GSP P A TP P SQP+ + D+ T V+GK V GET +EE K
Sbjct: 522 GSPSKTVTPKAVPMLTPKPY-SQPKNSQDVLKT-------FKVDGKVSVNGETVHREEEK 573
Query: 213 KYAFVDVSPEETLQKSSFDNFEDVKETSSSKDAQPPKDSQNGAAFNYNAGSP 264
+ V+P +L KS FE V S P + Q+ + N P
Sbjct: 574 ERECPTVAPAHSLTKSQM--FEGVARVHGS----PLELKQDNGSIEINIKKP 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,681,707
Number of Sequences: 539616
Number of extensions: 7264041
Number of successful extensions: 25788
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 25485
Number of HSP's gapped (non-prelim): 408
length of query: 427
length of database: 191,569,459
effective HSP length: 120
effective length of query: 307
effective length of database: 126,815,539
effective search space: 38932370473
effective search space used: 38932370473
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)