Query 014282
Match_columns 427
No_of_seqs 127 out of 215
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 08:46:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014282hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lnm_A Protein TIC 40, chlorop 99.8 8.3E-20 2.8E-24 140.2 8.2 62 364-425 1-62 (62)
2 2llw_A Heat shock protein STI1 99.7 1.1E-18 3.9E-23 138.5 6.3 60 359-418 4-63 (71)
3 2llv_A Heat shock protein STI1 99.3 4.9E-13 1.7E-17 105.3 1.7 53 366-418 14-67 (71)
4 2lnm_A Protein TIC 40, chlorop 97.1 0.00051 1.7E-08 52.5 4.9 48 282-333 14-61 (62)
5 2llw_A Heat shock protein STI1 96.5 0.0019 6.5E-08 51.2 3.8 43 282-328 22-64 (71)
6 2kqz_A Proteasomal ubiquitin r 95.4 0.0045 1.5E-07 55.4 1.3 51 275-325 38-91 (155)
7 2kr0_A Proteasomal ubiquitin r 94.0 0.037 1.3E-06 56.3 4.2 55 274-328 293-350 (411)
8 2qsf_X RAD23, UV excision repa 92.3 0.04 1.4E-06 50.3 1.3 45 282-330 25-79 (171)
9 2llv_A Heat shock protein STI1 85.4 0.2 7E-06 39.1 0.6 23 305-328 22-44 (71)
10 3fse_A Two-domain protein cont 63.8 14 0.00047 36.6 6.9 99 279-403 229-336 (365)
11 3pkr_A FLIG, flagellar motor s 51.5 34 0.0012 32.9 7.2 52 276-328 60-129 (279)
12 2qsf_X RAD23, UV excision repa 50.7 9.5 0.00032 34.7 3.0 38 368-408 39-82 (171)
13 3ltm_A Alpha-REP4; protein eng 50.6 90 0.0031 25.9 8.9 15 316-330 64-78 (211)
14 2fv2_A RCD1 required for cell 46.8 13 0.00044 36.2 3.4 50 281-330 218-267 (268)
15 2zs0_B Extracellular giant hem 44.9 25 0.00085 29.1 4.5 54 366-419 30-93 (142)
16 2zs0_C Extracellular giant hem 44.7 25 0.00085 29.3 4.5 54 366-419 34-97 (147)
17 3hjl_A Flagellar motor switch 41.9 44 0.0015 32.8 6.4 51 277-328 116-184 (329)
18 1x46_A Globin chain, hemoglobi 41.7 95 0.0033 25.6 7.6 54 365-418 27-97 (150)
19 2zs0_A Extracellular giant hem 41.5 30 0.001 28.6 4.5 53 366-418 30-92 (140)
20 1oqy_A HHR23A, UV excision rep 40.7 21 0.00072 35.5 4.0 39 281-323 236-279 (368)
21 1x9f_D Globin C, hemoglobin ch 40.5 32 0.0011 28.2 4.5 53 366-418 30-92 (140)
22 1pve_A HHR23B, UV excision rep 40.4 14 0.00049 29.4 2.2 11 282-292 6-16 (72)
23 1ith_A Hemoglobin (cyano Met); 38.8 20 0.0007 29.5 3.1 52 366-418 28-92 (141)
24 1yhu_D Hemoglobin B2 chain; gl 38.1 36 0.0012 28.4 4.5 54 366-419 34-97 (149)
25 1x9f_C Erythrocruorin, globin 38.0 45 0.0015 27.9 5.1 53 366-418 38-100 (153)
26 2nrl_A Myoglobin; transport pr 37.6 55 0.0019 27.3 5.6 51 366-418 24-87 (147)
27 4fhr_B Flagellar motor switch 37.4 72 0.0025 29.4 6.8 52 277-329 3-72 (216)
28 2f4m_B UV excision repair prot 37.1 44 0.0015 25.7 4.5 6 374-379 23-28 (61)
29 1sct_B Hemoglobin II (carbonmo 36.2 73 0.0025 26.4 6.1 53 366-418 37-101 (151)
30 1h97_A Globin-3; HET: HEM; 1.1 34.4 36 0.0012 28.6 4.0 54 366-419 30-97 (147)
31 1yhu_B Giant hemoglobins B cha 34.4 41 0.0014 27.6 4.2 54 366-419 32-95 (144)
32 1x9f_B Erythrocruorin, globin 34.1 46 0.0016 27.5 4.5 54 366-419 32-95 (145)
33 3g46_A Globin-1; oxygen transp 34.0 47 0.0016 27.6 4.6 53 366-418 35-99 (146)
34 1jf3_A Monomer hemoglobin comp 32.8 49 0.0017 27.1 4.4 54 366-419 29-89 (147)
35 1it2_A Hemoglobin; hagfish, de 31.8 47 0.0016 27.7 4.2 53 366-418 36-101 (146)
36 1x9f_A Globin IV, extracellula 31.4 41 0.0014 28.3 3.8 53 366-418 37-99 (151)
37 1yhu_C Hemoglobin B1A chain; g 30.5 59 0.002 27.0 4.6 53 366-418 35-97 (148)
38 2vyw_A Hemoglobin; trematode, 29.8 45 0.0015 28.1 3.8 54 366-419 31-98 (148)
39 4hrt_B Hemoglobin B chain; oxy 29.6 94 0.0032 26.0 5.7 53 366-418 38-102 (152)
40 1b0b_A Hemoglobin; hemoprotein 28.7 1.1E+02 0.0039 24.9 6.0 53 366-418 27-94 (142)
41 1x3k_A Hemoglobin component V; 28.2 66 0.0023 27.0 4.5 53 366-418 30-96 (152)
42 1sct_A Hemoglobin II (carbonmo 27.5 69 0.0024 26.6 4.5 53 366-418 36-100 (150)
43 1mba_A Myoglobin; oxygen stora 26.9 52 0.0018 27.0 3.6 53 366-418 28-94 (147)
44 1o9i_A Pseudocatalase; oxidore 26.8 51 0.0017 31.8 4.0 19 400-418 158-176 (266)
45 2k7r_A Primosomal protein DNAI 26.4 26 0.0009 28.6 1.7 17 366-382 23-39 (106)
46 1lhs_A Myoglobin; oxygen stora 26.1 90 0.0031 26.1 5.0 51 366-418 27-91 (153)
47 2f4m_B UV excision repair prot 25.4 34 0.0011 26.4 2.0 31 282-329 4-34 (61)
48 1pve_A HHR23B, UV excision rep 25.1 35 0.0012 27.2 2.1 33 370-405 21-59 (72)
49 1v54_M VIIIB, IX, cytochrome C 24.8 56 0.0019 24.2 3.0 28 98-125 10-40 (46)
50 2wy4_A Single domain haemoglob 24.7 35 0.0012 27.6 2.1 53 366-418 26-82 (140)
51 2k7r_A Primosomal protein DNAI 24.7 63 0.0021 26.3 3.6 16 377-392 25-40 (106)
52 1hlm_A Hemoglobin (cyano Met); 24.4 67 0.0023 26.7 3.9 53 366-418 38-103 (159)
53 1a6m_A Myoglobin; heme protein 24.3 1E+02 0.0035 25.7 5.0 51 366-418 27-91 (151)
54 3l4h_A E3 ubiquitin-protein li 23.9 97 0.0033 26.4 4.7 51 366-416 15-66 (109)
55 2lhb_A Hemoglobin V (cyano Met 23.5 96 0.0033 25.7 4.6 53 366-418 36-103 (149)
56 2dc3_A Cytoglobin; myoglobin, 23.5 89 0.003 27.4 4.6 53 366-418 47-114 (193)
57 1hlb_A Hemoglobin (deoxy); oxy 22.8 81 0.0028 26.3 4.1 54 365-418 37-103 (158)
58 4e17_B Catenin alpha-1; four h 21.3 48 0.0016 24.1 2.0 17 385-407 23-39 (40)
No 1
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=99.80 E-value=8.3e-20 Score=140.18 Aligned_cols=62 Identities=73% Similarity=1.238 Sum_probs=60.1
Q ss_pred hHHHHHHhcCCHHHHhhcCCHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHHHCCCCCC
Q 014282 364 PEEVITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAELFPGVTG 425 (427)
Q Consensus 364 pEE~~skaM~DPEI~aamQDPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a~FgG~~~ 425 (427)
||++++|+++|||++++|+||+|+++|+||++||+++++|++||+|+.+|+||.++|||.+|
T Consensus 1 ~~e~~~kl~~dPe~~~~m~dP~~~~~lq~i~~NP~~~~~~~~dP~v~~~~~~L~~~~~g~~~ 62 (62)
T 2lnm_A 1 PEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGMTG 62 (62)
T ss_dssp CHHHHHHHTTSHHHHHHTTSHHHHHHHHHHTTCGGGHHHHTTCHHHHHHHHHHHHHSSSCCC
T ss_pred CHHHHHHHHcChHHHHHcCCHHHHHHHHHHHHCHHHHHHHHhChHHHHHHHHHHHHhCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999876
No 2
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.1e-18 Score=138.54 Aligned_cols=60 Identities=28% Similarity=0.436 Sum_probs=58.0
Q ss_pred hcCCChHHHHHHhcCCHHHHhhcCCHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHH
Q 014282 359 QIGLTPEEVITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 359 ~~G~tpEE~~skaM~DPEI~aamQDPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a 418 (427)
..|+++||++.++|+||||+++|+||+|+++|+||++||++++||++||+|+++|+||++
T Consensus 4 ~~~e~~ee~~~~~m~dPEi~~im~DP~~~~~lq~~~~NP~~~~k~~~nP~v~~~i~kl~~ 63 (71)
T 2llw_A 4 TSNETPEETYQRAMKDPEVAAIMQDPVMQSILQQAQQNPAALQEHMKNPEVFKKIQTLIA 63 (71)
T ss_dssp TCCSCHHHHHHHHHHSHHHHHHHTCTHHHHHHHHHHHCHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHhcCHHHHHHhCCHHHHHHHHHHHHCHHHHHHHHhCHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999999976
No 3
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=99.29 E-value=4.9e-13 Score=105.26 Aligned_cols=53 Identities=21% Similarity=0.414 Sum_probs=50.1
Q ss_pred HHHHHhcCCHHHHhhcCCHHHHHHHHHHhhChHHHHH-hhcCHHHHHHHHHHHH
Q 014282 366 EVITKMMANPEIALGFQSPRVQAAIMECSQNPMNIIK-YQNDKEVMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~DPEI~aamQDPeV~aALqDI~sNPaai~K-YmsNPkVm~~IqKL~a 418 (427)
+.++++++|||++++|+||+|+++|+||++||++|++ |++||+|+++|.||..
T Consensus 14 ~~~~kl~~dP~t~~~~~DP~~~~~lq~i~~NP~~i~~~~~~dPrv~~~l~~L~g 67 (71)
T 2llv_A 14 NLIENLKKNPKTSEMMKDPQLVAKLIGYKQNPQAIGQDLFTDPRLMTIMATLMG 67 (71)
T ss_dssp SCHHHHHHSSTTHHHHHSCTHHHHHHHHHHSCTTHHHHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHHcChHHHHHhcCHHHHHHHHHHHHCHHHHHHHHhhCcHHHHHHHHHHc
Confidence 3478999999999999999999999999999999999 9999999999999964
No 4
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=97.14 E-value=0.00051 Score=52.45 Aligned_cols=48 Identities=13% Similarity=0.150 Sum_probs=40.9
Q ss_pred HHHhhcCHHHHHhhcCCCccccCCHHHHHHHhhChHHHHHHHHHHHhccCCC
Q 014282 282 LEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMCESG 333 (427)
Q Consensus 282 l~~Mm~nPq~QqM~ypyLPe~MRNp~tfk~MlqNPq~rqqL~~Ml~~mgg~g 333 (427)
+..+|+||+|++++.- .++||..+..+++||.+++.|+.+++-+||-+
T Consensus 14 ~~~~m~dP~~~~~lq~----i~~NP~~~~~~~~dP~v~~~~~~L~~~~~g~~ 61 (62)
T 2lnm_A 14 VAMAFQNPRVQAALME----CSENPMNIMKYQNDKEVMDVFNKISQLFPGMT 61 (62)
T ss_dssp HHHHTTSHHHHHHHHH----HTTCGGGHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHcCCHHHHHHHHH----HHHCHHHHHHHHhChHHHHHHHHHHHHhCCCC
Confidence 5566777777777665 88999999999999999999999999998854
No 5
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.0019 Score=51.21 Aligned_cols=43 Identities=28% Similarity=0.570 Sum_probs=34.1
Q ss_pred HHHhhcCHHHHHhhcCCCccccCCHHHHHHHhhChHHHHHHHHHHHh
Q 014282 282 LEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDG 328 (427)
Q Consensus 282 l~~Mm~nPq~QqM~ypyLPe~MRNp~tfk~MlqNPq~rqqL~~Ml~~ 328 (427)
|..+|+||+|++++.- .|+||+.+..+|+||.+++.|+.+.+.
T Consensus 22 i~~im~DP~~~~~lq~----~~~NP~~~~k~~~nP~v~~~i~kl~~a 64 (71)
T 2llw_A 22 VAAIMQDPVMQSILQQ----AQQNPAALQEHMKNPEVFKKIQTLIAA 64 (71)
T ss_dssp HHHHHTCTHHHHHHHH----HHHCHHHHHHHHHSHHHHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHH----HHHCHHHHHHHHhCHHHHHHHHHHHHc
Confidence 4456667777766665 788999999999999999999988764
No 6
>2kqz_A Proteasomal ubiquitin receptor ADRM1; proteasome, UCH37-binding domain, protein binding; NMR {Homo sapiens} PDB: 2l5v_A
Probab=95.36 E-value=0.0045 Score=55.39 Aligned_cols=51 Identities=20% Similarity=0.420 Sum_probs=44.5
Q ss_pred ccccHHHHHHhhcCHHHHHhhcCCCccccC---CHHHHHHHhhChHHHHHHHHH
Q 014282 275 RFLTVDTLEKLMEDPQVQKMVYPSLPEEMR---NPASFKLMLQNPEYRKQLQEM 325 (427)
Q Consensus 275 ~~~~~~~l~~Mm~nPq~QqM~ypyLPe~MR---Np~tfk~MlqNPq~rqqL~~M 325 (427)
..++.+.|..+++||.+++-+++|||+.-+ +.+-++..++.|||+|.|.-+
T Consensus 38 dvLt~e~l~~ll~d~~~~~~L~~~LP~~~~~~~~~e~L~~~l~SPQF~Qal~~f 91 (155)
T 2kqz_A 38 SVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMF 91 (155)
T ss_dssp HHTCTTTSHHHHHSHHHHHHHHHHSCSSCCCCSSHHHHHSSCCSHHHHHHHHHH
T ss_pred HHhCHHHHHHHHcCHHHHHHHHhhCCCCCCCCCCHHHHHHHHcCHHHHHHHHHH
Confidence 346677888999999999999999999865 889999999999999998654
No 7
>2kr0_A Proteasomal ubiquitin receptor ADRM1; proteasome, 19S regulator, protein binding; NMR {Homo sapiens}
Probab=93.96 E-value=0.037 Score=56.30 Aligned_cols=55 Identities=18% Similarity=0.392 Sum_probs=45.8
Q ss_pred CccccHHHHHHhhcCHHHHHhhcCCCcccc---CCHHHHHHHhhChHHHHHHHHHHHh
Q 014282 274 GRFLTVDTLEKLMEDPQVQKMVYPSLPEEM---RNPASFKLMLQNPEYRKQLQEMLDG 328 (427)
Q Consensus 274 ~~~~~~~~l~~Mm~nPq~QqM~ypyLPe~M---RNp~tfk~MlqNPq~rqqL~~Ml~~ 328 (427)
...|+.|.|..+++||++++-+.+||||.= +..+-++..|+.|||+|.|+-+=..
T Consensus 293 ~dvLt~e~l~pll~d~e~~erL~~~LP~~~~~~~t~e~L~e~l~SPQF~QaL~~fs~A 350 (411)
T 2kr0_A 293 ASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAA 350 (411)
T ss_dssp GGTSCHHHHHHHHTSHHHHHHHGGGCCSSCCCCCSHHHHTTSCCSHHHHHHHHHHHHH
T ss_pred HHhhCHHHHHHHhcCHHHHHHHHhhCCCCcCcCCCHHHHHHHhcCHHHHHHHHHHHHH
Confidence 345778999999999999999999999853 3778888889999999999655433
No 8
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=92.27 E-value=0.04 Score=50.29 Aligned_cols=45 Identities=11% Similarity=0.199 Sum_probs=31.1
Q ss_pred HHHhh-cCHHHHHhhcCCCccccCCHHHHHHHhh-----ChHHHHHH----HHHHHhcc
Q 014282 282 LEKLM-EDPQVQKMVYPSLPEEMRNPASFKLMLQ-----NPEYRKQL----QEMLDGMC 330 (427)
Q Consensus 282 l~~Mm-~nPq~QqM~ypyLPe~MRNp~tfk~Mlq-----NPq~rqqL----~~Ml~~mg 330 (427)
|+-|+ ++|+||+|..= -.+||+.+.-||| ||++.++| +++|+-++
T Consensus 25 l~~L~~~~Pqf~qlRq~----vqqNPqlL~~lLqqig~~NPqL~qlI~qNqe~Fl~mLn 79 (171)
T 2qsf_X 25 PGSIGLTVEDLLSLRQV----VSGNPEALAPLLENISARYPQLREHIMANPEVFVSMLL 79 (171)
T ss_dssp ---CCCCHHHHHHHHHH----HHTCGGGHHHHHHHHHHHCTTHHHHHHHCHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHH----HHHCHHHHHHHHHHHHhhCHHHHHHHHHCHHHHHHHHh
Confidence 88899 99999887543 3469999998887 89988887 34444443
No 9
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=85.41 E-value=0.2 Score=39.06 Aligned_cols=23 Identities=17% Similarity=0.420 Sum_probs=13.5
Q ss_pred CHHHHHHHhhChHHHHHHHHHHHh
Q 014282 305 NPASFKLMLQNPEYRKQLQEMLDG 328 (427)
Q Consensus 305 Np~tfk~MlqNPq~rqqL~~Ml~~ 328 (427)
||+|.++ |++|+|++.|+++.++
T Consensus 22 dP~t~~~-~~DP~~~~~lq~i~~N 44 (71)
T 2llv_A 22 NPKTSEM-MKDPQLVAKLIGYKQN 44 (71)
T ss_dssp SSTTHHH-HHSCTHHHHHHHHHHS
T ss_pred ChHHHHH-hcCHHHHHHHHHHHHC
Confidence 4444443 3667777666666655
No 10
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=63.81 E-value=14 Score=36.61 Aligned_cols=99 Identities=15% Similarity=0.255 Sum_probs=60.6
Q ss_pred HHHHHHhhcCHHHHHhhcCCCccccCCHHHHHHHhhChHH-HHHHHHHHHhccCCCCCchhHhhhhhcCCCChHHHHHHH
Q 014282 279 VDTLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEY-RKQLQEMLDGMCESGEFDGRVLDSLKNFDLNSAEVKQQF 357 (427)
Q Consensus 279 ~~~l~~Mm~nPq~QqM~ypyLPe~MRNp~tfk~MlqNPq~-rqqL~~Ml~~mgg~g~~~~~m~d~l~e~D~Nn~Ev~q~f 357 (427)
+++.+.-.+||.++ ..|+-|.+|-+. -++|++-|.++|+-..|+..+.+.+.+.-....
T Consensus 229 ~e~~a~~~~d~~~~--------------~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~~~~~a~~~~~~~------ 288 (365)
T 3fse_A 229 LEKYTEKESDVEAK--------------ALFQEMITNKQRHIEYLETYLTRLGEKPSLSANIANQYAKVKTALT------ 288 (365)
T ss_dssp HHHHHHHCCCHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC-------------------
T ss_pred HHHHHHhcCCHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcchhHHHHHHHHHhc------
Confidence 45555667899999 788989988766 467899999999988887766554444320000
Q ss_pred HhcCCChHHHHHHhcCC--------HHHHhhcCCHHHHHHHHHHhhChHHHHHh
Q 014282 358 EQIGLTPEEVITKMMAN--------PEIALGFQSPRVQAAIMECSQNPMNIIKY 403 (427)
Q Consensus 358 ~~~G~tpEE~~skaM~D--------PEI~aamQDPeV~aALqDI~sNPaai~KY 403 (427)
+-++-+.++++++| -++..-+.||+=.++|.+|.. .+.||
T Consensus 289 ---~~~~~~~l~~al~~~~~gi~~~~~l~~~~~dp~~~~i~~~i~~---~l~~~ 336 (365)
T 3fse_A 289 ---GSDDIYQIRSALGDIQTGIGDIGNLCAMYTDPIATAIFKEIYK---DLVKY 336 (365)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHH---HHHHH
T ss_pred ---CCChHHHHHHHhcchhhhHHHHHHHHHhcCCHHHHHHHHHHHH---HHHHH
Confidence 11112334444433 356667789999999999988 44444
No 11
>3pkr_A FLIG, flagellar motor switch protein; FLIF, FLIM, MOTA, motor prote; 2.60A {Helicobacter pylori} PDB: 3usw_A 3pl4_A 3usy_A
Probab=51.47 E-value=34 Score=32.94 Aligned_cols=52 Identities=19% Similarity=0.386 Sum_probs=37.4
Q ss_pred cccHHHHHHhhc--CHHHHHhhcCCC------------ccccCCHHHHHHHhh----ChHHHHHHHHHHHh
Q 014282 276 FLTVDTLEKLME--DPQVQKMVYPSL------------PEEMRNPASFKLMLQ----NPEYRKQLQEMLDG 328 (427)
Q Consensus 276 ~~~~~~l~~Mm~--nPq~QqM~ypyL------------Pe~MRNp~tfk~Mlq----NPq~rqqL~~Ml~~ 328 (427)
.++.++|+++++ .||.+-++..|| |+++|+ +.+.+|.. .|+.-+.|++.|.+
T Consensus 60 ~~dp~~La~~l~~EhPQtiAlILs~L~~~~AA~VL~~Lp~~~r~-dV~~Ria~l~~v~p~~l~~le~~L~~ 129 (279)
T 3pkr_A 60 KIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKA-EISIRMANLGEISPQVVKRVSTVLEN 129 (279)
T ss_dssp GSCHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHHTTSCHHHHH-HHHHHHHTCCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHHHHCCHHHHH-HHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 377899999986 599998887765 566665 45555543 57777777777765
No 12
>2qsf_X RAD23, UV excision repair protein RAD23; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_X* 2qsh_X* 1x3z_B* 1x3w_B* 3esw_B*
Probab=50.66 E-value=9.5 Score=34.73 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=23.6
Q ss_pred HHHhcCCHHHHhhc------CCHHHHHHHHHHhhChHHHHHhhcCHH
Q 014282 368 ITKMMANPEIALGF------QSPRVQAAIMECSQNPMNIIKYQNDKE 408 (427)
Q Consensus 368 ~skaM~DPEI~aam------QDPeV~aALqDI~sNPaai~KYmsNPk 408 (427)
..-+.+||+++..| +||.+.+ -|++||..+...+++|.
T Consensus 39 Rq~vqqNPqlL~~lLqqig~~NPqL~q---lI~qNqe~Fl~mLnep~ 82 (171)
T 2qsf_X 39 RQVVSGNPEALAPLLENISARYPQLRE---HIMANPEVFVSMLLEAV 82 (171)
T ss_dssp HHHHHTCGGGHHHHHHHHHHHCTTHHH---HHHHCHHHHHHHHHHCC
T ss_pred HHHHHHCHHHHHHHHHHHHhhCHHHHH---HHHHCHHHHHHHHhCcc
Confidence 44566677766555 5666543 45567777777776663
No 13
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=50.64 E-value=90 Score=25.87 Aligned_cols=15 Identities=13% Similarity=0.142 Sum_probs=6.9
Q ss_pred hHHHHHHHHHHHhcc
Q 014282 316 PEYRKQLQEMLDGMC 330 (427)
Q Consensus 316 Pq~rqqL~~Ml~~mg 330 (427)
+.+|......|.+++
T Consensus 64 ~~vr~~a~~aL~~~~ 78 (211)
T 3ltm_A 64 AWVRRAAADALGQIG 78 (211)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhC
Confidence 344444444444443
No 14
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=46.78 E-value=13 Score=36.22 Aligned_cols=50 Identities=10% Similarity=0.379 Sum_probs=43.4
Q ss_pred HHHHhhcCHHHHHhhcCCCccccCCHHHHHHHhhChHHHHHHHHHHHhcc
Q 014282 281 TLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGMC 330 (427)
Q Consensus 281 ~l~~Mm~nPq~QqM~ypyLPe~MRNp~tfk~MlqNPq~rqqL~~Ml~~mg 330 (427)
--..+-+||.-..++-.+||+..||.+--.-+-.||..|+.+.+++.+.+
T Consensus 218 cYlRLsdn~rar~aL~~~LP~~Lrd~tf~~~l~~D~~~k~~l~qLl~n~~ 267 (268)
T 2fv2_A 218 CYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQ 267 (268)
T ss_dssp HHHHHTTSHHHHHHHHHHSCGGGTSSTTHHHHTSCHHHHHHHHHHHHHSC
T ss_pred HHHHHhcCHHHHHHHHHhCcHHhhChHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 34567889999999999999999998777777789999999999998865
No 15
>2zs0_B Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_B* 2d2m_B* 2zfo_B* 2zs1_B*
Probab=44.90 E-value=25 Score=29.08 Aligned_cols=54 Identities=13% Similarity=0.157 Sum_probs=40.4
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++. +||++..|. +|+|++--..+..==..+.++++|++ +...+.+|..+
T Consensus 30 ~~~~rlF~~~P~~k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~ 93 (142)
T 2zs0_B 30 RIWEDLFANMPDARGLFSRVNGNDIDSSEFQAHSLRVLGGLDMCVASLDDVPVLNALLARLNSQ 93 (142)
T ss_dssp HHHHHHHHHCGGGGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 66888886 899999885 57877666666665566778888876 77788888764
No 16
>2zs0_C Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_C* 2d2m_C* 2zfo_C* 2zs1_C*
Probab=44.66 E-value=25 Score=29.32 Aligned_cols=54 Identities=13% Similarity=0.151 Sum_probs=38.9
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++. +||++..|. +|++.+--..+..==..+.++++|++ +...+.+|..+
T Consensus 34 ~~~~rlF~~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~ 97 (147)
T 2zs0_C 34 AVFASLFSRDAAAQGLFSGVSADNPDSADFRAHCVRVVNGLDVAINMLNDPAVLNEQLAHLSAQ 97 (147)
T ss_dssp HHHHHHHHHCGGGGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHhccccCccCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 66888886 899999984 67887755555555556677888876 66777777653
No 17
>3hjl_A Flagellar motor switch protein FLIG; armadillo repeat motif, superhelix, conformational plasticit repeat, torque generation; 2.40A {Aquifex aeolicus}
Probab=41.92 E-value=44 Score=32.78 Aligned_cols=51 Identities=27% Similarity=0.472 Sum_probs=32.6
Q ss_pred ccHHHHHHhhc--CHHHHHhhcCCC------------ccccCCHHHHHHHhh----ChHHHHHHHHHHHh
Q 014282 277 LTVDTLEKLME--DPQVQKMVYPSL------------PEEMRNPASFKLMLQ----NPEYRKQLQEMLDG 328 (427)
Q Consensus 277 ~~~~~l~~Mm~--nPq~QqM~ypyL------------Pe~MRNp~tfk~Mlq----NPq~rqqL~~Ml~~ 328 (427)
++.++|+.+++ .||.+-++..|| |+.+|+ +++.+|.. +|+.-+.|++.|.+
T Consensus 116 ~dp~~la~~i~~EhPQtiAlILs~L~p~~AA~vL~~Lp~~~r~-ev~~Ria~l~~v~p~~l~~le~~L~~ 184 (329)
T 3hjl_A 116 VDSRILASLLKNEHPQTIALFLSQLSPKKSAEIIQNLPEELKK-EVVKRIATLENVNVQYVKELAQILLE 184 (329)
T ss_dssp SCHHHHHHHHTTSCHHHHHHHHTTSCHHHHHHHHHTSCHHHHH-HHHHHHHHCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHHhCCHHHHH-HHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 56778888875 599999988876 455554 34444443 56666655555543
No 18
>1x46_A Globin chain, hemoglobin component VII; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.50A {Tokunagayusurika akamusi}
Probab=41.70 E-value=95 Score=25.59 Aligned_cols=54 Identities=7% Similarity=0.087 Sum_probs=34.9
Q ss_pred HHHHHHhcC-CHHHHhhcC------------CHHHHHHHHHHhhChHHHHHhhcC---HH-HHHHHHHHHH
Q 014282 365 EEVITKMMA-NPEIALGFQ------------SPRVQAAIMECSQNPMNIIKYQND---KE-VMSVITKIAE 418 (427)
Q Consensus 365 EE~~skaM~-DPEI~aamQ------------DPeV~aALqDI~sNPaai~KYmsN---Pk-Vm~~IqKL~a 418 (427)
.+.+.+++. +||++..|. +|++++--.-+..==..+.++++| ++ +...+.+|..
T Consensus 27 ~~~~~rlF~~~P~~k~~F~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~l~~~l~~L~~ 97 (150)
T 1x46_A 27 VDILYNFFKSYPASQAKFSAFAGKDLESLKDTAPFALHATRIVSVINEAIALMGVAENRPALKNVLKQQGI 97 (150)
T ss_dssp HHHHHHHHHHCHHHHTTCTTTTTSCHHHHTTSHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCHHHHHhhHhccCCCHHHHhhChHHHHHHHHHHHHHHHHHHHccCcCcHHHHHHHHHHHHH
Confidence 567888886 788888885 555555444444444455667777 55 5667777765
No 19
>2zs0_A Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_A* 2d2m_A* 2zfo_A* 2zs1_A*
Probab=41.47 E-value=30 Score=28.56 Aligned_cols=53 Identities=9% Similarity=0.179 Sum_probs=37.7
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. +|++++--..+..==..+.++++|++ +...+.+|..
T Consensus 30 ~~y~rlF~~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~al~~~v~~ld~~~~l~~~l~~L~~ 92 (140)
T 2zs0_A 30 DLFSELFNIQGSSRALFSGVGVDDMNSAAFTAHCLRVTGALNRLISQLDQQATINADLAHLAG 92 (140)
T ss_dssp HHHHHHHHHCGGGGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56778886 788888884 57777655555555556677788866 6677777765
No 20
>1oqy_A HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens} SCOP: a.5.2.1 a.5.2.1 a.189.1.1 d.15.1.1 PDB: 1qze_A 1tp4_A
Probab=40.70 E-value=21 Score=35.45 Aligned_cols=39 Identities=38% Similarity=0.516 Sum_probs=28.7
Q ss_pred HHHHhhcCHHHHHhhcCCCccccCCHHHHHHHhh-----ChHHHHHHH
Q 014282 281 TLEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQ-----NPEYRKQLQ 323 (427)
Q Consensus 281 ~l~~Mm~nPq~QqM~ypyLPe~MRNp~tfk~Mlq-----NPq~rqqL~ 323 (427)
.|+-+.++||||+|-.= --+||+.++-||| ||++.++|.
T Consensus 236 ~l~~Lr~~pqf~~lR~~----vq~nP~~l~~~lq~l~~~nP~l~~~I~ 279 (368)
T 1oqy_A 236 PLEFLRDQPQFQNMRQV----IQQNPALLPALLQQLGQENPQLLQQIS 279 (368)
T ss_dssp TTHHHHHSHHHHHHHHS----TTTCTTHHHHHHTTTTTTCHHHHHHHH
T ss_pred hHHHHhcChHHHHHHHH----HHhChHHHHHHHHHHHhhCHHHHHHHH
Confidence 46888899999876543 2358888887775 888887774
No 21
>1x9f_D Globin C, hemoglobin chain D1, globin III, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_D*
Probab=40.54 E-value=32 Score=28.25 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=38.1
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. +|+|.+--.-+..==..+.++++|++ +...+.+|..
T Consensus 30 ~~~~~lF~~~P~~k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~ 92 (140)
T 1x9f_D 30 ELWRDIIDDHPEIKAPFSRVRGDNIYSPEFGAHSQRVLSGLDITISMLDTPDMLAAQLAHLKV 92 (140)
T ss_dssp HHHHHHHHHCGGGGGGGGGGTTTCTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChhHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 66888886 899999884 57777655555555556677888877 6677777765
No 22
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=40.37 E-value=14 Score=29.44 Aligned_cols=11 Identities=55% Similarity=0.652 Sum_probs=7.9
Q ss_pred HHHhhcCHHHH
Q 014282 282 LEKLMEDPQVQ 292 (427)
Q Consensus 282 l~~Mm~nPq~Q 292 (427)
|+-+.++|+|+
T Consensus 6 l~~Lr~~Pqf~ 16 (72)
T 1pve_A 6 LEFLRNQPQFQ 16 (72)
T ss_dssp TGGGTTCTTTT
T ss_pred HHHHHcChHHH
Confidence 46677888866
No 23
>1ith_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.50A {Urechis caupo} SCOP: a.1.1.2
Probab=38.85 E-value=20 Score=29.48 Aligned_cols=52 Identities=10% Similarity=0.128 Sum_probs=39.2
Q ss_pred HHHHHhcC-CHHHHhhcC------------CHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ------------SPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ------------DPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++.+--..+..==..+.++++|+ +...+.+|..
T Consensus 28 ~~~~rlF~~~P~~k~~F~~~~~~~~~~l~~~~~~~~h~~~v~~al~~~v~~ld~~-l~~~l~~L~~ 92 (141)
T 1ith_A 28 SIFFKYLTAYPGDLAFFHKFSSVPLYGLRSNPAYKAQTLTVINYLDKVVDALGGN-AGALMKAKVP 92 (141)
T ss_dssp HHHHHHHHHSGGGGGGCTTTTTSCGGGGGGCHHHHHHHHHHHHHHHHHHHTTTTT-HHHHHHTTHH
T ss_pred HHHHHHHHHChHHHHHhHhhcCCCHHHHhhCHHHHHHHHHHHHHHHHHHHHcccH-HHHHHHHHHH
Confidence 66888886 799998885 6777766666666566677888887 8788877765
No 24
>1yhu_D Hemoglobin B2 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=38.08 E-value=36 Score=28.39 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=38.4
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++. +||++..|. +|++++--..+..==..+.++++|++ +...+.+|..+
T Consensus 34 ~~y~rlF~~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~ 97 (149)
T 1yhu_D 34 AVFKDLFANVPDAVGLFGAVKGDEVNSNEFKAHCIRVVNGLDSSIGLLSDPATLNEQLSHLATQ 97 (149)
T ss_dssp HHHHHHHHHCGGGGGGGGGGTSSSTTSHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 66888886 899999884 57777655555555556677888876 66677777653
No 25
>1x9f_C Erythrocruorin, globin III, extracellular, globin C; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_C*
Probab=38.00 E-value=45 Score=27.90 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=34.5
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. +|++++--..+..==..+.++++|++ +...+.+|..
T Consensus 38 ~~y~rlF~~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~ 100 (153)
T 1x9f_C 38 LLLTKLAKDIPEVNDLFKRVDIEHAEGPKFSAHALRILNGLDLAINLLDDPPALDAALDHLAH 100 (153)
T ss_dssp HHHHHHHHHSTTHHHHTGGGTGGGTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHChHHHHhhhhcCccCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56777775 788888883 56666444444443445667777876 6667777765
No 26
>2nrl_A Myoglobin; transport protein; HET: HEM; 0.91A {Thunnus atlanticus} PDB: 2nx0_A* 3qm5_A* 3qm6_A* 3qm7_A* 3qm8_A* 3qm9_A* 3qma_A* 1myt_A* 2nrm_A*
Probab=37.63 E-value=55 Score=27.26 Aligned_cols=51 Identities=18% Similarity=0.274 Sum_probs=35.8
Q ss_pred HHHHHhcC-CHHHHhhc------------CCHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGF------------QSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aam------------QDPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a 418 (427)
+.+.+++. +||++..| .||++.+--..+..==..+.++++|++ ..+.+|..
T Consensus 24 ~~~~rlF~~~P~~k~~F~~f~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~--~~l~~L~~ 87 (147)
T 2nrl_A 24 LVLTRLFKEHPETQKLFPKFAGIAQADIAGNAAVSAHGATVLKKLGELLKAKGSHA--AILKPLAN 87 (147)
T ss_dssp HHHHHHHHHCHHHHTTCTTTTTCCGGGTTTCHHHHHHHHHHHHHHHHHHHCSSCHH--HHHHHHHH
T ss_pred HHHHHHHHHCHhHHHHhhhhcCCCHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCHH--HHHHHHHH
Confidence 66778876 78888888 466766555555555556677788877 67777765
No 27
>4fhr_B Flagellar motor switch protein FLIG; motor protein; 1.93A {Thermotoga maritima} PDB: 1lkv_X 3ajc_A 1qc7_A 3soh_B
Probab=37.37 E-value=72 Score=29.35 Aligned_cols=52 Identities=25% Similarity=0.421 Sum_probs=34.9
Q ss_pred ccHHHHHHhhc--CHHHHHhhcCCC------------ccccCCHHHHHHHhh----ChHHHHHHHHHHHhc
Q 014282 277 LTVDTLEKLME--DPQVQKMVYPSL------------PEEMRNPASFKLMLQ----NPEYRKQLQEMLDGM 329 (427)
Q Consensus 277 ~~~~~l~~Mm~--nPq~QqM~ypyL------------Pe~MRNp~tfk~Mlq----NPq~rqqL~~Ml~~m 329 (427)
.+-.+|..+++ .||++-+++.|| |+++|+ +.+.+|-. +|+.-+.|++.|.+.
T Consensus 3 mdp~~la~~l~~EhPQ~iA~iLs~L~~~~AA~VL~~Lp~~~~~-ev~~Ria~l~~v~p~~~~~l~~~L~~~ 72 (216)
T 4fhr_B 3 MDPVQLVNFLQSEHPQTIAVVLSYLDPPVAAQILGALPEELQT-EVLKRIALLERTSPEVVKEIERNLEKK 72 (216)
T ss_dssp CCHHHHHHHHTTSCHHHHHHHHHTSCHHHHHHHHHTSCGGGHH-HHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHhCCHHHHHHHHHHCCHHHHH-HHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 45677888875 589988887765 666665 44455443 677777777766654
No 28
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=37.05 E-value=44 Score=25.73 Aligned_cols=6 Identities=33% Similarity=0.606 Sum_probs=2.5
Q ss_pred CHHHHh
Q 014282 374 NPEIAL 379 (427)
Q Consensus 374 DPEI~a 379 (427)
||+++.
T Consensus 23 NP~~L~ 28 (61)
T 2f4m_B 23 NPSLLP 28 (61)
T ss_dssp CGGGHH
T ss_pred CHHHHH
Confidence 444433
No 29
>1sct_B Hemoglobin II (carbonmonoxy) (beta chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=36.18 E-value=73 Score=26.42 Aligned_cols=53 Identities=15% Similarity=0.266 Sum_probs=31.6
Q ss_pred HHHHHhcC-CHHHHhhc----------CCHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGF----------QSPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aam----------QDPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..| .||++..--.-+..==..+.++++|++ +...+.+|..
T Consensus 37 ~~y~rlF~~~P~~k~~F~~f~~~~~~~~n~~~~~h~~~v~~al~~~v~~ld~~~~l~~~l~~L~~ 101 (151)
T 1sct_B 37 MLMANLFKTSPSAKGKFARLGDVSAGKDNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFAV 101 (151)
T ss_dssp HHHHHHHHHCHHHHHHTGGGCCGGGGGGCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHHhCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 55666665 67777777 345554444444444445566777755 5566777655
No 30
>1h97_A Globin-3; HET: HEM; 1.17A {Paramphistomum epiclitum} SCOP: a.1.1.2 PDB: 1kfr_A*
Probab=34.42 E-value=36 Score=28.60 Aligned_cols=54 Identities=9% Similarity=0.174 Sum_probs=40.1
Q ss_pred HHHHHhcC-CHHHHhhcC------------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ------------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ------------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++. +||++..|. +|++.+=-..+..==..+.++++|++ +...+.+|..+
T Consensus 30 ~~~~rlF~~~P~~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~ 97 (147)
T 1h97_A 30 GAYHALFTAHPQYISHFSRLEGHTIENVMQSEGIKHYARTLTEAIVHMLKEISNDAEVKKIAAQYGKD 97 (147)
T ss_dssp HHHHHHHHHCGGGGGGSGGGTTCCTTTGGGSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCchHHHhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 66788886 788888884 67776666666666666788888876 67888888764
No 31
>1yhu_B Giant hemoglobins B chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=34.37 E-value=41 Score=27.57 Aligned_cols=54 Identities=13% Similarity=0.175 Sum_probs=39.6
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++. +||++..|. ||++..--..+..==..+.++++|++ +...+.+|..+
T Consensus 32 ~~~~~lF~~~P~~k~~F~~~~~~~~~s~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~ 95 (144)
T 1yhu_B 32 FIWSHVFQHSPAARDMFKRVRGDNIHTPAFRAHATRVLGGLDMCIALLDDEPVLNTQLAHLAKQ 95 (144)
T ss_dssp HHHHHHHHHCGGGGGGGGGGTTTCSSSHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHChHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 56778776 888888885 37777666666666666788888876 66788888663
No 32
>1x9f_B Erythrocruorin, globin II, extracellular, globin AIII, globin B; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_B*
Probab=34.11 E-value=46 Score=27.52 Aligned_cols=54 Identities=13% Similarity=0.055 Sum_probs=39.1
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++. +||++..|. ||+|.+--.-+..==..+.++++|++ +...+.+|..+
T Consensus 32 ~~y~rlF~~~P~~k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~~ 95 (145)
T 1x9f_B 32 AIWRATFAQVPESRSLFKRVHGDDTSHPAFIAHADRVLGGLDIAISTLDQPATLKEELDHLQVQ 95 (145)
T ss_dssp HHHHHHHHHCGGGGGGGGGGTTTCTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHHhHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 66888886 899998884 57777665556555566777888877 66777777663
No 33
>3g46_A Globin-1; oxygen transport, allostery, oxygen affinity, cytoplasm, heme, iron, metal-binding, oxygen storage/transport, oxygen binding; HET: HEM; 0.91A {Scapharca inaequivalvis} SCOP: a.1.1.2 PDB: 1nxf_A* 3g4q_A* 3g4r_A* 3g4u_A* 3g4v_A* 3g4w_A* 3g4y_A* 3g52_A* 3g53_A* 3uhg_A* 3uhs_A* 3uhk_A* 3uhi_A* 3uhn_A* 3ugy_A* 2auo_A* 2aup_A* 3uhr_A* 3uh5_A* 3uh3_A* ...
Probab=33.95 E-value=47 Score=27.65 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=38.9
Q ss_pred HHHHHhcC-CHHHHhhcC----------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ----------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ----------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++.+--..+..==..+.++++|++ +...+.+|..
T Consensus 35 ~~~~rlF~~~P~~k~~F~~~~~~~~~~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~l~~ 99 (146)
T 3g46_A 35 ALMTTLFADNQETIGYFKRLGDVSQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAV 99 (146)
T ss_dssp HHHHHHHHHCGGGGGGGGGGCCGGGGGGCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHHHcCCCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67888888 799998885 57776665566655567788888887 6666677655
No 34
>1jf3_A Monomer hemoglobin component III; oxygen storage/transport complex; HET: HEM; 1.40A {Glycera dibranchiata} SCOP: a.1.1.2 PDB: 1jl7_A* 1jf4_A* 1jl6_A* 1vre_A* 1vrf_A* 1hbg_A* 2hbg_A*
Probab=32.76 E-value=49 Score=27.11 Aligned_cols=54 Identities=19% Similarity=0.247 Sum_probs=37.4
Q ss_pred HHHHHhc-CCHHHHhhcC-----CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMM-ANPEIALGFQ-----SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM-~DPEI~aamQ-----DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++ .+||++..|. ||+++.--..+..==..+.++++|++ +...+.+|..+
T Consensus 29 ~~y~rlf~~~P~~~~~F~~~~~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~~ 89 (147)
T 1jf3_A 29 ECLSKFISAHPEMAAVFGFSGASDPGVAELGAKVLAQIGVAVSHLGDEGKMVAEMKAVGVR 89 (147)
T ss_dssp HHHHHHHHHCGGGTTTTTCSSTTCHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChhHHHHcCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 6788999 6999999996 48888644444444445667777764 45667777653
No 35
>1it2_A Hemoglobin; hagfish, deoxy form, oxygen storage/transport complex; HET: HEM; 1.60A {Eptatretus burgeri} SCOP: a.1.1.2 PDB: 1it3_A*
Probab=31.85 E-value=47 Score=27.71 Aligned_cols=53 Identities=15% Similarity=0.386 Sum_probs=39.4
Q ss_pred HHHHHhcC-CHHHHhhc-----------CCHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGF-----------QSPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aam-----------QDPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..| .||++.+--..+..==..+.++++|++ +...+.+|..
T Consensus 36 ~~~~rlF~~~P~~k~~F~~f~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~ 101 (146)
T 1it2_A 36 NILLRFLKCFPQAQASFPKFSTKKSNLEQDPEVKHQAVVIFNKVNEIINSMDNQEEIIKSLKDLSQ 101 (146)
T ss_dssp HHHHHHHHHCGGGGGGCTTTTTCCSCGGGCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHccccCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 67888886 89999988 467777666666666666778888876 6667777765
No 36
>1x9f_A Globin IV, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_A*
Probab=31.43 E-value=41 Score=28.28 Aligned_cols=53 Identities=15% Similarity=0.256 Sum_probs=38.1
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++.+--..+..==..+.++++|++ +...+.+|..
T Consensus 37 ~~~~rlF~~~P~~k~~F~~~~~~~~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~ 99 (151)
T 1x9f_A 37 AVFDDLFKHYPTSKALFERVKIDEPESGEFKSHLVRVANGLKLLINLLDDTLVLQSHLGHLAD 99 (151)
T ss_dssp HHHHHHHHHCGGGGGGGTTTTTTSTTSSHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 67888886 899999995 67766555555555556677788865 6677777765
No 37
>1yhu_C Hemoglobin B1A chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=30.46 E-value=59 Score=27.04 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=39.3
Q ss_pred HHHHHhcC-CHHHHhhcC--------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++..--..+..==..+.++++|++ +...+.+|..
T Consensus 35 ~~y~rlF~~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~ 97 (148)
T 1yhu_C 35 EVFAALFKMVPAAKNLFTRVNVADINSPEFQGHVVRVMGGLDILINALDDIPTLESMLDHLAG 97 (148)
T ss_dssp HHHHHHHHHCGGGGGGSGGGTGGGTTSHHHHHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHChhHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 66888886 899999884 67776666666666666788888866 5677777765
No 38
>2vyw_A Hemoglobin; trematode, oxygen binding; HET: HEM; 1.8A {Fasciola hepatica}
Probab=29.81 E-value=45 Score=28.09 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=37.1
Q ss_pred HHHHHhcC-CHHHHhhc------------CCHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGF------------QSPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAEL 419 (427)
Q Consensus 366 E~~skaM~-DPEI~aam------------QDPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a~ 419 (427)
+.+.+++. +||++..| .||+|.+--..+..==..+.++++|++ +...+.+|..+
T Consensus 31 ~~~~rlF~~~P~~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~~ 98 (148)
T 2vyw_A 31 SIYKTLFAAHPEYISYFSKLQGLTKDNVGQSEGIRYYGRTLGEELIRLLKAASNPSVLEERIVQGAKD 98 (148)
T ss_dssp HHHHHHHHHCGGGGGGSGGGTTCCTTTGGGCSHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchHHHhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 56777775 78888877 345555555555555556677888877 67888888764
No 39
>4hrt_B Hemoglobin B chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_B*
Probab=29.65 E-value=94 Score=25.97 Aligned_cols=53 Identities=15% Similarity=0.266 Sum_probs=29.1
Q ss_pred HHHHHhcC-CHHHHhhc----------CCHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGF----------QSPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aam----------QDPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..| ++|++++=-..+..==..+.++++|++ +...+.+|..
T Consensus 38 ~~y~rlF~~~P~~k~~F~~f~~~~~~~~~~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~ 102 (152)
T 4hrt_B 38 MLMANLFKTSPSAKGKFARLGDVSAGKDNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFAV 102 (152)
T ss_dssp HHHHHHHHHCTHHHHHTGGGCCCC---CCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHhHHHhhHHhCCCCccccCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 55777776 67777776 456533322222222234455667755 4555666654
No 40
>1b0b_A Hemoglobin; hemoprotein, sulfide carrier, globins, oxygen transport, oxygen storage/transport complex; HET: HEM; 1.43A {Lucina pectinata} SCOP: a.1.1.2 PDB: 1ebt_A* 1flp_A* 1moh_A*
Probab=28.69 E-value=1.1e+02 Score=24.88 Aligned_cols=53 Identities=11% Similarity=0.167 Sum_probs=32.1
Q ss_pred HHHHHhcC-CHHHHhhcCC-------------HHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQS-------------PRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQD-------------PeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|.. |++.+--..+..==..+.++++|++ +...+.+|..
T Consensus 27 ~~~~rlF~~~P~~~~~F~~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~ 94 (142)
T 1b0b_A 27 EFFMALFDAHDDVFAKFSGLFSGAAKGTVKNTPEMAAQAQSFKGLVSNWVDNLDNAGALEGQCKTFAA 94 (142)
T ss_dssp HHHHHHHHHCHHHHHTTTTTTTTCCGGGCTTSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchHHHHhHHhhCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 56777775 7888888743 4444443444433344556677765 5667777755
No 41
>1x3k_A Hemoglobin component V; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.64A {Tokunagayusurika akamusi} PDB: 2zwj_A* 3a5a_A* 3a5b_A* 3a5g_A* 3a9m_A* 3arj_A* 3ark_A* 3arl_A*
Probab=28.16 E-value=66 Score=27.00 Aligned_cols=53 Identities=13% Similarity=0.113 Sum_probs=36.1
Q ss_pred HHHHHhcC-CHHHHhhcC------------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ------------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ------------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. +|++++--..|..==..+.++++|++ +...+.+|..
T Consensus 30 ~~~~rlF~~~P~~k~~F~~f~~~~~~~l~~~~~~~ah~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~ 96 (152)
T 1x3k_A 30 TVFYNYLKKYPSNQDKFETLKGHPLDEVKDTANFKLIAGRIFTIFDNCVKNVGNDKGFQKVIADMSG 96 (152)
T ss_dssp HHHHHHHHHSGGGGGGSTTTTTSCHHHHTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHChhHHHHhHhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 56777775 788888885 56666665555554455677788865 5567777765
No 42
>1sct_A Hemoglobin II (carbonmonoxy) (alpha chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=27.51 E-value=69 Score=26.59 Aligned_cols=53 Identities=13% Similarity=0.291 Sum_probs=34.4
Q ss_pred HHHHHhcC-CHHHHhhcC----------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ----------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ----------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++..--..+..==..+.++++||+ +...+.+|..
T Consensus 36 ~~~~rlF~~~P~~k~~F~~~~d~~~~~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~ 100 (150)
T 1sct_A 36 MLMSNLFTLRPDTKTYFTRLGDVQKGKANSKLRGHAITLTYALNNFVDSLDDPSRLKCVVEKFAV 100 (150)
T ss_dssp HHHHHHHHHCGGGGGGGCTTCCGGGGGGSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHChhHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56777776 788888884 55555544444444455667777765 5567777755
No 43
>1mba_A Myoglobin; oxygen storage; HET: HEM; 1.60A {Aplysia limacina} SCOP: a.1.1.2 PDB: 2fal_A* 3mba_A* 4mba_A* 5mba_A* 2fam_A* 1dm1_A*
Probab=26.90 E-value=52 Score=27.05 Aligned_cols=53 Identities=11% Similarity=0.259 Sum_probs=31.2
Q ss_pred HHHHHhcC-CHHHHhhc------------CCHHHHHHHHHHhhChHHHHHhhcCH-HHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGF------------QSPRVQAAIMECSQNPMNIIKYQNDK-EVMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aam------------QDPeV~aALqDI~sNPaai~KYmsNP-kVm~~IqKL~a 418 (427)
+.+.+++. +||++..| ++|++++--..+..==..+.++++|+ ++...+.+|..
T Consensus 28 ~~~~rlF~~~P~~k~~F~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~ 94 (147)
T 1mba_A 28 DFLVALFEKFPDSANFFADFKGKSVADIKASPKLRDVSSRIFTRLNEFVNNAANAGKMSAMLSQFAK 94 (147)
T ss_dssp HHHHHHHHHCGGGGGGCTTTTTCCHHHHHTCTTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchHHHhhHhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 56777775 78888888 34556553333333333456666774 44566666654
No 44
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=26.83 E-value=51 Score=31.77 Aligned_cols=19 Identities=11% Similarity=0.230 Sum_probs=14.9
Q ss_pred HHHhhcCHHHHHHHHHHHH
Q 014282 400 IIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 400 i~KYmsNPkVm~~IqKL~a 418 (427)
+.+..+||.|.+.|..|+.
T Consensus 158 l~~~tdDp~vkd~L~fLi~ 176 (266)
T 1o9i_A 158 LYSMTEDEGVRDMLKFLLA 176 (266)
T ss_dssp HHTTCCCHHHHHHHHHHHH
T ss_pred HHHhcCChhHHHHHHHHHH
Confidence 3445579999999998876
No 45
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=26.43 E-value=26 Score=28.57 Aligned_cols=17 Identities=12% Similarity=0.286 Sum_probs=11.2
Q ss_pred HHHHHhcCCHHHHhhcC
Q 014282 366 EVITKMMANPEIALGFQ 382 (427)
Q Consensus 366 E~~skaM~DPEI~aamQ 382 (427)
+.++++++||+|++.++
T Consensus 23 ~~~~~vl~dP~V~~Fl~ 39 (106)
T 2k7r_A 23 QMKEKVMKDQDVQAFLK 39 (106)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHH
Confidence 45677777777766553
No 46
>1lhs_A Myoglobin; oxygen storage; HET: HEM; 2.00A {Caretta caretta} SCOP: a.1.1.2 PDB: 1lht_A*
Probab=26.14 E-value=90 Score=26.13 Aligned_cols=51 Identities=27% Similarity=0.354 Sum_probs=28.0
Q ss_pred HHHHHhcC-CHHHHhhcC-------------CHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ-------------SPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ-------------DPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++.+--..+..==..+.++++|++ ..+.+|..
T Consensus 27 ~~~~rlF~~~P~~k~~F~~f~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~--~~l~~L~~ 91 (153)
T 1lhs_A 27 EVIIRLFQLHPETQERFAKFKNLTTIDALKSSEEVKKHGTTVLTALGRILKQKNNHE--QELKPLAE 91 (153)
T ss_dssp HHHHHHHHHCHHHHTTCGGGTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHTTTTCCH--HHHHHHHH
T ss_pred HHHHHHHHHChhHHHHhHhhcCCCcHHHHcCCHHHHHHHHHHHHHHHHHHHhccCHH--HHHHHHHH
Confidence 55666665 677777663 34444333333333334556667766 66666654
No 47
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=25.39 E-value=34 Score=26.42 Aligned_cols=31 Identities=35% Similarity=0.530 Sum_probs=18.4
Q ss_pred HHHhhcCHHHHHhhcCCCccccCCHHHHHHHhhChHHHHHHHHHHHhc
Q 014282 282 LEKLMEDPQVQKMVYPSLPEEMRNPASFKLMLQNPEYRKQLQEMLDGM 329 (427)
Q Consensus 282 l~~Mm~nPq~QqM~ypyLPe~MRNp~tfk~MlqNPq~rqqL~~Ml~~m 329 (427)
|+-+.++|+|+ +.=+..-+||+. |..+|.+.
T Consensus 4 l~~Lr~~Pqf~--------------~lR~~vq~NP~~---L~~lLqql 34 (61)
T 2f4m_B 4 LEFLRNQPQFQ--------------QMRQIIQQNPSL---LPALLQQI 34 (61)
T ss_dssp GGGGTTCHHHH--------------HHHHHHHHCGGG---HHHHHHHH
T ss_pred HHHHHcChHHH--------------HHHHHHHHCHHH---HHHHHHHH
Confidence 46677888877 334445566666 44444443
No 48
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=25.07 E-value=35 Score=27.23 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=15.4
Q ss_pred HhcCCHHHHhhc------CCHHHHHHHHHHhhChHHHHHhhc
Q 014282 370 KMMANPEIALGF------QSPRVQAAIMECSQNPMNIIKYQN 405 (427)
Q Consensus 370 kaM~DPEI~aam------QDPeV~aALqDI~sNPaai~KYms 405 (427)
-+-+||+++..+ +||++.. -|++||..+...++
T Consensus 21 ~vqqNP~lL~~lLqqL~~~NPqL~q---~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 21 IIQQNPSLLPALLQQIGRENPQLLQ---QISQHQEHFIQMLN 59 (72)
T ss_dssp HHTTCGGGHHHHHHHHHTTCHHHHH---HHHTTHHHHHHHHH
T ss_pred HHHHCHHHHHHHHHHHHhHCHHHHH---HHHHCHHHHHHHHc
Confidence 344466655444 4454332 33445555444443
No 49
>1v54_M VIIIB, IX, cytochrome C oxidase polypeptide VIII-heart; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: f.23.7.1 PDB: 1oco_M* 1occ_M* 1ocz_M* 1ocr_M* 1v55_M* 2dyr_M* 2dys_M* 2eij_M* 2eik_M* 2eil_M* 2eim_M* 2ein_M* 2occ_M* 2ybb_X* 2zxw_M* 3abk_M* 3abl_M* 3abm_M* 3ag1_M* 3ag2_M* ...
Probab=24.82 E-value=56 Score=24.25 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=22.0
Q ss_pred CCCchhHHHHHHHHHHHH---HHHHHHHHHH
Q 014282 98 VGSPLFWVGVGVGLSALF---SFVASRLKQY 125 (427)
Q Consensus 98 iGsPl~wiGvGVgLsalf---s~va~~vK~y 125 (427)
+|.-=--||++|.+.++| +||.+.+++|
T Consensus 10 ~s~~E~aigl~v~f~~~L~PagWVLshL~~Y 40 (46)
T 1v54_M 10 TSPKEQAIGLSVTFLSFLLPAGWVLYHLDNY 40 (46)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 444445678999888887 7999999988
No 50
>2wy4_A Single domain haemoglobin; heme, transport, oxygen transport; HET: HEM; 1.35A {Campylobacter jejuni}
Probab=24.75 E-value=35 Score=27.61 Aligned_cols=53 Identities=19% Similarity=0.145 Sum_probs=29.6
Q ss_pred HHHHHhcC-CHHHHhhcC--CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ--SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ--DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
..+.+++. |||++..|. |..+..--..+..-=..+.++++|+. +...+.+|..
T Consensus 26 ~fy~rlf~~~P~~~~~F~~~~~~~~~q~~~~~~~l~~~v~~ld~~~~l~~~l~~l~~ 82 (140)
T 2wy4_A 26 EFYKIMFNDYPEVKPMFNMEKQISGEQPKALAMAILMAAKNIENLENMRSFVDKVAI 82 (140)
T ss_dssp HHHHHHHHHCGGGGGGSCHHHHHTSHHHHHHHHHHHHHHHTTTCGGGGHHHHHHHHH
T ss_pred HHHHHHHHHChHHHHhcCcCcccHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 67899996 999999996 33221111111111123344556654 5666666655
No 51
>2k7r_A Primosomal protein DNAI; DNAI N-terminal domain, helicase-loading protein, ATP- binding, DNA replication, nucleotide-binding, primosome; NMR {Bacillus subtilis}
Probab=24.66 E-value=63 Score=26.31 Aligned_cols=16 Identities=25% Similarity=0.144 Sum_probs=13.7
Q ss_pred HHhhcCCHHHHHHHHH
Q 014282 377 IALGFQSPRVQAAIME 392 (427)
Q Consensus 377 I~aamQDPeV~aALqD 392 (427)
+.++|+||+|++.|++
T Consensus 25 ~~~vl~dP~V~~Fl~~ 40 (106)
T 2k7r_A 25 KEKVMKDQDVQAFLKE 40 (106)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHHHHcCHHHHHHHHH
Confidence 7789999999998764
No 52
>1hlm_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.90A {Caudina arenicola} SCOP: a.1.1.2
Probab=24.37 E-value=67 Score=26.72 Aligned_cols=53 Identities=11% Similarity=0.249 Sum_probs=36.4
Q ss_pred HHHHHhc-CCHHHHhhcCC------------HHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHH
Q 014282 366 EVITKMM-ANPEIALGFQS------------PRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM-~DPEI~aamQD------------PeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a 418 (427)
+.+.+++ .+||++..|.. |++..--..+..==..+.++++|..+...+.+|..
T Consensus 38 ~~y~rlf~~~P~~~~~F~~~~d~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~l~~~l~~L~~ 103 (159)
T 1hlm_A 38 DVFIRIFHNDPTAQRKFPQMAGLSPAELRTSRQMHAHAIRVSALMTTYIDEMDTEVLPELLATLTR 103 (159)
T ss_dssp HHHHHHTTTCSTTTTSSTTTTTSCSTTCSCCHHHHHHHHHHHHHHHHHHHTTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHhcccccCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 6688888 58999988843 66666555555444555666777667777777765
No 53
>1a6m_A Myoglobin; heme protein, model compounds, oxygen storage, ligand binding geometry, conformational substates, oxygen transpor; HET: HEM; 1.00A {Physeter catodon} SCOP: a.1.1.2 PDB: 1a6k_A* 1a6n_A* 2jho_A* 1ufp_A* 2eb9_A* 2eb8_A* 2w6w_A* 2ekt_A* 105m_A* 104m_A* 1ajh_A* 1ajg_A* 1bvc_A* 1bvd_A* 1bz6_A* 1bzr_A* 1cq2_A* 1duk_A* 1ebc_A* 1hjt_A* ...
Probab=24.29 E-value=1e+02 Score=25.72 Aligned_cols=51 Identities=16% Similarity=0.290 Sum_probs=28.2
Q ss_pred HHHHHhcC-CHHHHhhcC-------------CHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ-------------SPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ-------------DPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a 418 (427)
+.+.+++. +||++..|. +|++.+--..+..==..+.++++|++ ..+.+|..
T Consensus 27 ~~~~rlF~~~P~~k~~F~~~~~~~~~~~l~~~~~~~~h~~~v~~al~~~v~~ld~~~--~~l~~L~~ 91 (151)
T 1a6m_A 27 DILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKKGHHE--AELKPLAQ 91 (151)
T ss_dssp HHHHHHHHHCHHHHTTCTTTTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHTTTTCCH--HHHHHHHH
T ss_pred HHHHHHHHHChhHHHHhHhhcCCCcHHHhcCCHHHHHHHHHHHHHHHHHHHccCCHH--HHHHHHHH
Confidence 55666665 677777662 34444433333333334556667766 66666654
No 54
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=23.87 E-value=97 Score=26.41 Aligned_cols=51 Identities=22% Similarity=0.352 Sum_probs=42.0
Q ss_pred HHHHHhcCCHHHHhhc-CCHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHH
Q 014282 366 EVITKMMANPEIALGF-QSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKI 416 (427)
Q Consensus 366 E~~skaM~DPEI~aam-QDPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL 416 (427)
+.++-+=.|.|.+.++ +++-|..++..|..+|..+.+|+.+.+.-..|+..
T Consensus 15 df~~~l~~n~~a~~~y~~~~~~k~~i~~irr~p~~we~~~~~~~lV~~vn~~ 66 (109)
T 3l4h_A 15 EFFTVLHANYSAYRVFTSSTCLKHMILKVRRDARNFERYQHNRDLVNFINMF 66 (109)
T ss_dssp THHHHHHTSHHHHHHHHHCSHHHHHHHHHHHCTHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHhccHHHHHHHhcchHHHHHHHHHhcCCcChhhhcCcCCceEEeccC
Confidence 4566666677777776 89999999999999999999999998877776654
No 55
>2lhb_A Hemoglobin V (cyano Met); oxygen transport; HET: HEM; 2.00A {Petromyzon marinus} SCOP: a.1.1.2 PDB: 3lhb_A* 1f5o_A* 1f5p_A* 1uc3_A*
Probab=23.52 E-value=96 Score=25.69 Aligned_cols=53 Identities=13% Similarity=0.190 Sum_probs=32.7
Q ss_pred HHHHHhcC-CHHHHhhcC-------------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ-------------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ-------------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++.+--..+..==..+.++++|++ +...+.+|..
T Consensus 36 ~~~~rlF~~~P~~k~~F~~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L~~ 103 (149)
T 2lhb_A 36 DILVKFFTSTPAAQEFFPKFKGLTTADELKKSADVRWHAERIINAVDDAVASMDDTEKMSMKLRNLSG 103 (149)
T ss_dssp HHHHHHHHHCGGGGGGCGGGTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHhHHHHhhhhcCCCCHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 56777775 788887773 45555444444444444567777766 5566677654
No 56
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=23.45 E-value=89 Score=27.44 Aligned_cols=53 Identities=15% Similarity=0.307 Sum_probs=31.5
Q ss_pred HHHHHhcC-CHHHHhhcC-------------CHHHHHHHHHHhhChHHHHHhhcCHH-HHHHHHHHHH
Q 014282 366 EVITKMMA-NPEIALGFQ-------------SPRVQAAIMECSQNPMNIIKYQNDKE-VMSVITKIAE 418 (427)
Q Consensus 366 E~~skaM~-DPEI~aamQ-------------DPeV~aALqDI~sNPaai~KYmsNPk-Vm~~IqKL~a 418 (427)
+.+.+++. +||++..|. ||++.+--.-+..==..+.++++|++ +...+.+|..
T Consensus 47 ~~y~rlF~~~P~~k~~F~~f~d~~~~~~l~~n~~~~~h~~~v~~al~~~v~~Ldd~~~l~~~l~~L~~ 114 (193)
T 2dc3_A 47 AILVRFFVNFPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVVENLHDPDKVSSVLALVGK 114 (193)
T ss_dssp HHHHHHHHHCGGGGGGCTTTTTCCCHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHhccCCCcHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 55677775 777777773 44444443444444445566777765 5666666654
No 57
>1hlb_A Hemoglobin (deoxy); oxygen transport; HET: HEM; 2.50A {Caudina arenicola} SCOP: a.1.1.2
Probab=22.84 E-value=81 Score=26.25 Aligned_cols=54 Identities=17% Similarity=0.282 Sum_probs=30.6
Q ss_pred HHHHHHhcC-CHHHHhhc------------CCHHHHHHHHHHhhChHHHHHhhcCHHHHHHHHHHHH
Q 014282 365 EEVITKMMA-NPEIALGF------------QSPRVQAAIMECSQNPMNIIKYQNDKEVMSVITKIAE 418 (427)
Q Consensus 365 EE~~skaM~-DPEI~aam------------QDPeV~aALqDI~sNPaai~KYmsNPkVm~~IqKL~a 418 (427)
.+.+.+++. +||++..| .||++..--..+..==..+.++++|.++...+.+|..
T Consensus 37 ~~~~~rlF~~~P~~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ld~~~l~~~l~~L~~ 103 (158)
T 1hlb_A 37 TDVFIRIFAYDPSAQNKFPQMAGMSASQLRSSRQMQAHAIRVSSIMSEYVEELDSDILPELLATLAR 103 (158)
T ss_dssp HHHHHHHHHHCTHHHHTSGGGTTCCHHHHTTCHHHHHHHHHHHHHHHHHHTTCCTTSHHHHTHHHHH
T ss_pred HHHHHHHHHHCHHHHHHhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHH
Confidence 356666665 67777766 3344444333333333445566666556677777654
No 58
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=21.29 E-value=48 Score=24.13 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=11.6
Q ss_pred HHHHHHHHHhhChHHHHHhhcCH
Q 014282 385 RVQAAIMECSQNPMNIIKYQNDK 407 (427)
Q Consensus 385 eV~aALqDI~sNPaai~KYmsNP 407 (427)
-|++||||+ +.+||+|+
T Consensus 23 avrqALQdL------lseY~~~~ 39 (40)
T 4e17_B 23 AVRQALQDL------LSEYMGNA 39 (40)
T ss_dssp HHHHHHHHH------HHHHHC--
T ss_pred HHHHHHHHH------HHHHhccC
Confidence 478889887 46788764
Done!