Query 014285
Match_columns 427
No_of_seqs 265 out of 1588
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 08:50:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014285.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014285hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u9i_A Mandelate racemase/muco 100.0 2.3E-76 7.8E-81 599.5 37.1 357 61-426 23-393 (393)
2 3q45_A Mandelate racemase/muco 100.0 2.2E-75 7.4E-80 588.4 41.9 354 65-426 1-359 (368)
3 3s5s_A Mandelate racemase/muco 100.0 7.7E-76 2.6E-80 595.2 36.5 355 64-426 4-364 (389)
4 3r0u_A Enzyme of enolase super 100.0 2.6E-75 9E-80 589.1 37.7 354 65-427 3-363 (379)
5 3ik4_A Mandelate racemase/muco 100.0 1.8E-74 6E-79 581.0 40.1 349 65-422 5-358 (365)
6 3i4k_A Muconate lactonizing en 100.0 1.3E-73 4.3E-78 578.4 41.9 354 65-426 6-369 (383)
7 3ro6_B Putative chloromuconate 100.0 2.1E-74 7.3E-79 578.8 34.8 351 65-424 1-356 (356)
8 3dgb_A Muconate cycloisomerase 100.0 1.1E-73 3.9E-78 578.4 39.4 354 65-426 6-369 (382)
9 3fcp_A L-Ala-D/L-Glu epimerase 100.0 1.3E-73 4.4E-78 577.9 39.7 354 64-426 4-367 (381)
10 3my9_A Muconate cycloisomerase 100.0 8.2E-74 2.8E-78 578.8 36.2 356 62-426 3-367 (377)
11 3i6e_A Muconate cycloisomerase 100.0 2E-73 6.8E-78 577.2 37.6 353 65-426 8-368 (385)
12 3dg3_A Muconate cycloisomerase 100.0 5.3E-73 1.8E-77 570.9 35.8 353 65-426 1-360 (367)
13 3fv9_G Mandelate racemase/muco 100.0 4.8E-72 1.6E-76 567.1 40.3 351 65-426 3-367 (386)
14 3jva_A Dipeptide epimerase; en 100.0 2.5E-72 8.6E-77 563.4 37.6 344 65-419 1-352 (354)
15 4e8g_A Enolase, mandelate race 100.0 9.5E-72 3.2E-76 565.3 41.5 351 65-426 23-383 (391)
16 3eez_A Putative mandelate race 100.0 9.8E-72 3.4E-76 563.5 41.5 352 65-427 3-363 (378)
17 2chr_A Chloromuconate cycloiso 100.0 2.2E-72 7.5E-77 567.2 35.9 353 65-426 1-363 (370)
18 1chr_A Chloromuconate cycloiso 100.0 3E-72 1E-76 566.0 31.1 353 65-426 1-363 (370)
19 3gd6_A Muconate cycloisomerase 100.0 5.6E-71 1.9E-75 560.3 39.2 345 65-426 1-364 (391)
20 1tkk_A Similar to chloromucona 100.0 9.7E-71 3.3E-75 554.4 40.6 353 65-425 1-360 (366)
21 3ozy_A Putative mandelate race 100.0 1.2E-70 4.1E-75 557.5 37.9 352 65-426 3-370 (389)
22 3qld_A Mandelate racemase/muco 100.0 1.1E-70 3.7E-75 557.3 36.3 349 65-426 1-365 (388)
23 4hpn_A Putative uncharacterize 100.0 7.9E-70 2.7E-74 550.0 39.4 349 65-426 1-370 (378)
24 2p8b_A Mandelate racemase/muco 100.0 6.5E-70 2.2E-74 549.0 37.7 352 65-426 1-358 (369)
25 4h2h_A Mandelate racemase/muco 100.0 2.1E-69 7.3E-74 546.3 41.2 354 61-426 6-369 (376)
26 1nu5_A Chloromuconate cycloiso 100.0 1.8E-69 6E-74 546.0 40.3 353 65-426 1-363 (370)
27 4dye_A Isomerase; enolase fami 100.0 6.3E-70 2.1E-74 552.9 36.3 347 63-426 22-383 (398)
28 2qde_A Mandelate racemase/muco 100.0 3.7E-69 1.3E-73 548.4 38.9 354 65-426 3-374 (397)
29 3ddm_A Putative mandelate race 100.0 6.3E-70 2.2E-74 552.4 32.6 352 64-426 9-377 (392)
30 3toy_A Mandelate racemase/muco 100.0 6.3E-69 2.1E-73 543.5 38.4 342 65-426 27-377 (383)
31 3mwc_A Mandelate racemase/muco 100.0 2.7E-69 9.4E-74 549.0 35.4 348 64-426 6-379 (400)
32 1wue_A Mandelate racemase/muco 100.0 1.4E-68 4.6E-73 542.3 38.9 350 64-426 19-376 (386)
33 3tj4_A Mandelate racemase; eno 100.0 9E-69 3.1E-73 540.9 36.6 346 65-426 1-364 (372)
34 3ugv_A Enolase; enzyme functio 100.0 9.3E-69 3.2E-73 543.5 36.4 344 64-426 27-384 (390)
35 1wuf_A Hypothetical protein LI 100.0 2.1E-68 7.3E-73 542.0 36.6 349 65-426 20-376 (393)
36 2ps2_A Putative mandelate race 100.0 6.7E-68 2.3E-72 534.7 39.3 351 65-426 4-363 (371)
37 4dwd_A Mandelate racemase/muco 100.0 4.3E-68 1.5E-72 538.8 37.5 338 65-426 3-364 (393)
38 2qdd_A Mandelate racemase/muco 100.0 1.5E-67 5.2E-72 533.3 41.4 349 65-427 3-363 (378)
39 3vdg_A Probable glucarate dehy 100.0 8.2E-68 2.8E-72 543.3 38.7 345 64-426 27-410 (445)
40 4h83_A Mandelate racemase/muco 100.0 2.9E-68 9.9E-73 539.9 34.2 349 63-426 18-380 (388)
41 3vc5_A Mandelate racemase/muco 100.0 1E-67 3.5E-72 542.4 38.0 345 65-426 23-406 (441)
42 4h1z_A Enolase Q92ZS5; dehydra 100.0 2.2E-68 7.7E-73 544.5 33.0 351 65-426 26-406 (412)
43 4e4u_A Mandalate racemase/muco 100.0 1.9E-67 6.5E-72 537.2 37.6 344 65-426 1-375 (412)
44 3sjn_A Mandelate racemase/muco 100.0 5.4E-68 1.9E-72 535.6 33.3 344 65-426 3-368 (374)
45 2rdx_A Mandelate racemase/muco 100.0 9.2E-67 3.1E-71 527.8 41.1 350 65-426 3-361 (379)
46 3rcy_A Mandelate racemase/muco 100.0 1.1E-67 3.7E-72 541.7 34.1 343 65-426 2-375 (433)
47 4e5t_A Mandelate racemase / mu 100.0 3.3E-67 1.1E-71 534.6 36.6 344 65-426 2-382 (404)
48 2zad_A Muconate cycloisomerase 100.0 1.3E-66 4.3E-71 520.5 39.5 340 65-414 2-345 (345)
49 3sbf_A Mandelate racemase / mu 100.0 4.6E-67 1.6E-71 533.3 36.0 340 64-426 5-376 (401)
50 3v3w_A Starvation sensing prot 100.0 5.3E-67 1.8E-71 535.8 36.5 339 64-426 22-401 (424)
51 3mkc_A Racemase; metabolic pro 100.0 1.7E-67 6E-72 535.0 32.6 342 63-426 8-383 (394)
52 3r4e_A Mandelate racemase/muco 100.0 8.7E-67 3E-71 533.5 37.7 340 63-426 15-395 (418)
53 3mqt_A Mandelate racemase/muco 100.0 2.1E-67 7.1E-72 534.6 32.3 341 64-426 4-378 (394)
54 3ijl_A Muconate cycloisomerase 100.0 2E-67 6.7E-72 524.5 30.2 331 69-421 2-337 (338)
55 3va8_A Probable dehydratase; e 100.0 1.3E-66 4.4E-71 534.4 36.8 346 63-426 25-410 (445)
56 3vcn_A Mannonate dehydratase; 100.0 1.1E-66 3.8E-71 533.5 35.4 339 64-426 23-402 (425)
57 3tji_A Mandelate racemase/muco 100.0 7.3E-67 2.5E-71 534.2 33.9 340 64-426 26-397 (422)
58 2zc8_A N-acylamino acid racema 100.0 4.6E-66 1.6E-70 520.9 37.0 348 65-426 1-356 (369)
59 1sjd_A N-acylamino acid racema 100.0 1.1E-65 3.6E-70 518.1 39.0 347 65-426 1-356 (368)
60 2pgw_A Muconate cycloisomerase 100.0 6.3E-66 2.2E-70 522.5 37.4 348 65-426 4-365 (384)
61 2gdq_A YITF; mandelate racemas 100.0 1.3E-65 4.4E-70 519.8 39.1 342 65-426 4-364 (382)
62 3t6c_A RSPA, putative MAND fam 100.0 5.1E-66 1.7E-70 530.3 36.1 340 64-426 26-415 (440)
63 1r0m_A N-acylamino acid racema 100.0 6.7E-66 2.3E-70 520.8 36.1 348 65-426 8-363 (375)
64 4hnl_A Mandelate racemase/muco 100.0 2.8E-66 9.6E-71 530.9 32.7 340 65-427 26-397 (421)
65 1mdl_A Mandelate racemase; iso 100.0 2.7E-65 9.4E-70 513.4 39.2 343 65-426 4-354 (359)
66 3cyj_A Mandelate racemase/muco 100.0 6.4E-66 2.2E-70 520.3 34.5 341 64-426 5-359 (372)
67 2ovl_A Putative racemase; stru 100.0 5.6E-65 1.9E-69 513.3 39.1 345 65-426 2-357 (371)
68 3bjs_A Mandelate racemase/muco 100.0 4.7E-65 1.6E-69 522.4 39.1 349 64-426 38-405 (428)
69 3rr1_A GALD, putative D-galact 100.0 2.9E-65 9.9E-70 519.8 36.6 334 65-426 2-358 (405)
70 2nql_A AGR_PAT_674P, isomerase 100.0 4.1E-65 1.4E-69 517.2 35.7 347 65-426 3-382 (388)
71 2qgy_A Enolase from the enviro 100.0 1.2E-64 4.1E-69 514.2 38.9 353 59-426 5-369 (391)
72 3v5c_A Mandelate racemase/muco 100.0 2.2E-65 7.4E-70 518.9 32.3 333 64-426 11-374 (392)
73 4e4f_A Mannonate dehydratase; 100.0 8.2E-65 2.8E-69 519.6 36.9 339 64-426 22-403 (426)
74 3p0w_A Mandelate racemase/muco 100.0 7.7E-65 2.6E-69 524.6 34.7 346 64-426 7-423 (470)
75 1rvk_A Isomerase/lactonizing e 100.0 3.8E-64 1.3E-68 509.2 38.6 340 65-426 1-376 (382)
76 3mzn_A Glucarate dehydratase; 100.0 1.2E-64 4.2E-69 521.1 34.8 346 64-426 4-404 (450)
77 4dxk_A Mandelate racemase / mu 100.0 2E-64 6.9E-69 513.4 35.0 335 65-426 1-385 (400)
78 3stp_A Galactonate dehydratase 100.0 1.3E-64 4.6E-69 515.7 33.4 345 64-426 22-405 (412)
79 3go2_A Putative L-alanine-DL-g 100.0 4.2E-64 1.4E-68 512.5 36.3 336 64-426 2-384 (409)
80 3pfr_A Mandelate racemase/muco 100.0 3.3E-64 1.1E-68 518.6 35.5 346 64-426 8-408 (455)
81 2og9_A Mandelate racemase/muco 100.0 1.4E-63 4.9E-68 506.6 37.4 344 64-425 12-371 (393)
82 4a35_A Mitochondrial enolase s 100.0 5.6E-64 1.9E-68 515.0 33.0 350 65-426 5-424 (441)
83 2pp0_A L-talarate/galactarate 100.0 1.9E-63 6.6E-68 506.4 36.4 342 65-424 26-383 (398)
84 3dip_A Enolase; structural gen 100.0 2.9E-63 1E-67 506.2 37.6 334 65-426 4-388 (410)
85 2pge_A MENC; OSBS, NYSGXRC, PS 100.0 8.1E-64 2.8E-68 505.8 32.0 340 66-414 4-371 (377)
86 3tcs_A Racemase, putative; PSI 100.0 3E-63 1E-67 502.3 35.3 333 65-426 23-378 (388)
87 2o56_A Putative mandelate race 100.0 3.9E-63 1.3E-67 505.7 35.4 346 65-426 4-390 (407)
88 4g8t_A Glucarate dehydratase; 100.0 9.1E-63 3.1E-67 509.6 34.3 346 65-426 26-425 (464)
89 2gl5_A Putative dehydratase pr 100.0 1.9E-62 6.5E-67 501.1 35.6 347 65-426 3-393 (410)
90 2poz_A Putative dehydratase; o 100.0 2.5E-62 8.5E-67 497.4 35.5 340 65-426 3-375 (392)
91 3p3b_A Mandelate racemase/muco 100.0 2E-63 6.7E-68 505.4 26.2 330 64-426 11-374 (392)
92 2ox4_A Putative mandelate race 100.0 3.9E-62 1.3E-66 497.7 35.8 343 65-426 3-384 (403)
93 2okt_A OSB synthetase, O-succi 100.0 1.3E-62 4.3E-67 490.9 30.6 322 65-422 2-331 (342)
94 2oz8_A MLL7089 protein; struct 100.0 1.1E-61 3.7E-66 492.2 33.9 339 65-426 3-355 (389)
95 2qq6_A Mandelate racemase/muco 100.0 3.2E-61 1.1E-65 491.9 34.3 336 65-426 6-386 (410)
96 2hzg_A Mandelate racemase/muco 100.0 3.9E-62 1.3E-66 497.3 24.8 348 65-426 3-371 (401)
97 1tzz_A Hypothetical protein L1 100.0 1.7E-60 5.9E-65 483.9 35.4 340 65-426 6-384 (392)
98 3ekg_A Mandelate racemase/muco 100.0 2.4E-60 8.4E-65 481.6 36.0 316 83-425 49-388 (404)
99 3fxg_A Rhamnonate dehydratase; 100.0 1.6E-60 5.4E-65 487.7 33.1 340 52-426 23-394 (455)
100 3caw_A O-succinylbenzoate synt 100.0 1.8E-60 6.1E-65 473.1 26.3 302 65-420 2-316 (330)
101 4gfi_A Mandelate racemase/muco 100.0 7.3E-60 2.5E-64 468.6 27.4 319 68-417 5-327 (329)
102 1jpd_X L-Ala-D/L-Glu epimerase 100.0 5E-59 1.7E-63 461.6 29.0 319 66-411 3-324 (324)
103 2hxt_A L-fuconate dehydratase; 100.0 9E-58 3.1E-62 470.5 32.4 347 65-426 2-419 (441)
104 2p3z_A L-rhamnonate dehydratas 100.0 3.4E-56 1.2E-60 454.0 33.8 307 91-426 67-400 (415)
105 1r6w_A OSB synthase, O-succiny 100.0 3.6E-55 1.2E-59 433.6 24.2 298 66-402 2-306 (322)
106 1kko_A 3-methylaspartate ammon 100.0 4.2E-55 1.4E-59 446.5 22.5 307 88-423 45-395 (413)
107 1kcz_A Beta-methylaspartase; b 100.0 4.4E-54 1.5E-58 439.4 25.8 302 80-386 36-385 (413)
108 2ozt_A TLR1174 protein; struct 100.0 1E-52 3.5E-57 417.6 25.1 288 69-389 4-300 (332)
109 2opj_A O-succinylbenzoate-COA 100.0 3.6E-50 1.2E-54 398.0 22.6 282 69-426 2-289 (327)
110 2pa6_A Enolase; glycolysis, ly 100.0 1.3E-48 4.5E-53 400.4 24.7 300 65-382 9-389 (427)
111 2fym_A Enolase; RNA degradosom 100.0 9.6E-49 3.3E-53 401.6 23.4 298 65-381 1-390 (431)
112 1w6t_A Enolase; bacterial infe 100.0 3.7E-46 1.3E-50 383.4 26.8 297 66-381 13-402 (444)
113 2ptz_A Enolase; lyase, glycoly 100.0 1E-44 3.5E-49 371.1 24.2 297 65-380 4-394 (432)
114 3uj2_A Enolase 1; enzyme funct 100.0 1.2E-42 3.9E-47 355.5 23.8 301 64-382 25-411 (449)
115 3qn3_A Enolase; structural gen 100.0 3.8E-42 1.3E-46 348.9 22.3 297 66-382 6-383 (417)
116 3tqp_A Enolase; energy metabol 100.0 4.9E-41 1.7E-45 341.8 27.9 283 93-381 19-384 (428)
117 2al1_A Enolase 1, 2-phospho-D- 100.0 5.2E-40 1.8E-44 335.8 24.8 281 93-380 16-393 (436)
118 2akz_A Gamma enolase, neural; 100.0 2.5E-39 8.6E-44 331.0 25.4 281 93-380 16-390 (439)
119 3qtp_A Enolase 1; glycolysis, 99.9 7.1E-25 2.4E-29 220.7 28.0 295 65-382 6-400 (441)
120 3otr_A Enolase; structural gen 99.9 8.4E-24 2.9E-28 212.9 25.1 279 93-382 18-403 (452)
121 3hgj_A Chromate reductase; TIM 98.3 1.6E-05 5.4E-10 78.7 15.7 120 209-334 155-318 (349)
122 1z41_A YQJM, probable NADH-dep 98.2 4.4E-05 1.5E-09 75.2 16.3 122 207-334 145-307 (338)
123 1ps9_A 2,4-dienoyl-COA reducta 98.0 5.2E-05 1.8E-09 81.4 14.9 121 207-333 142-309 (671)
124 3aty_A Tcoye, prostaglandin F2 98.0 5.5E-05 1.9E-09 75.6 13.8 119 208-334 176-336 (379)
125 1icp_A OPR1, 12-oxophytodienoa 98.0 4.1E-05 1.4E-09 76.5 11.9 121 206-333 167-329 (376)
126 1vyr_A Pentaerythritol tetrani 97.9 8.8E-05 3E-09 73.7 13.4 121 206-333 161-322 (364)
127 3kru_A NADH:flavin oxidoreduct 97.8 0.0003 1E-08 69.3 15.0 118 209-333 146-306 (343)
128 3l5l_A Xenobiotic reductase A; 97.7 0.00011 3.7E-09 73.1 10.4 119 209-333 161-324 (363)
129 2r14_A Morphinone reductase; H 97.5 0.00093 3.2E-08 66.6 13.9 121 206-333 166-327 (377)
130 2gou_A Oxidoreductase, FMN-bin 97.5 0.0016 5.4E-08 64.7 14.2 122 206-334 161-322 (365)
131 3gr7_A NADPH dehydrogenase; fl 97.3 0.0028 9.7E-08 62.2 14.0 119 209-333 147-306 (340)
132 3gka_A N-ethylmaleimide reduct 97.3 0.0029 9.9E-08 62.6 13.4 119 208-333 163-315 (361)
133 4ab4_A Xenobiotic reductase B; 97.2 0.0043 1.5E-07 61.5 13.3 118 209-333 156-307 (362)
134 2hsa_B 12-oxophytodienoate red 97.1 0.004 1.4E-07 62.5 12.4 122 206-334 171-348 (402)
135 1vhn_A Putative flavin oxidore 96.3 0.038 1.3E-06 53.5 12.6 134 193-336 58-215 (318)
136 3k30_A Histamine dehydrogenase 96.0 0.14 4.8E-06 54.8 16.6 122 207-333 157-323 (690)
137 1jub_A Dihydroorotate dehydrog 96.0 0.067 2.3E-06 51.4 12.7 133 195-335 95-272 (311)
138 3b0p_A TRNA-dihydrouridine syn 95.8 0.29 9.8E-06 48.0 16.3 135 193-333 57-224 (350)
139 1o94_A Tmadh, trimethylamine d 95.2 0.15 5.2E-06 54.9 13.2 123 206-333 149-320 (729)
140 2e6f_A Dihydroorotate dehydrog 95.2 0.076 2.6E-06 51.1 9.6 133 194-334 94-273 (314)
141 1s2w_A Phosphoenolpyruvate pho 95.0 0.69 2.4E-05 44.2 15.7 105 202-310 90-215 (295)
142 3l5a_A NADH/flavin oxidoreduct 94.5 0.57 2E-05 47.0 14.4 117 209-333 173-345 (419)
143 1f76_A Dihydroorotate dehydrog 94.5 0.48 1.7E-05 45.8 13.4 122 205-334 152-318 (336)
144 3ih1_A Methylisocitrate lyase; 94.4 0.33 1.1E-05 46.6 11.7 145 202-354 100-265 (305)
145 4e38_A Keto-hydroxyglutarate-a 94.1 2.1 7E-05 39.4 16.1 141 200-363 40-183 (232)
146 3eoo_A Methylisocitrate lyase; 93.4 0.63 2.1E-05 44.5 11.6 101 202-309 94-212 (298)
147 3b8i_A PA4872 oxaloacetate dec 93.2 1.9 6.4E-05 41.0 14.3 100 202-309 93-209 (287)
148 3fa4_A 2,3-dimethylmalate lyas 93.1 2.8 9.7E-05 40.0 15.6 144 202-355 91-262 (302)
149 3noy_A 4-hydroxy-3-methylbut-2 92.8 0.33 1.1E-05 47.3 8.5 95 258-360 43-139 (366)
150 3lye_A Oxaloacetate acetyl hyd 92.7 2.4 8.3E-05 40.6 14.5 152 194-355 89-270 (307)
151 1wa3_A 2-keto-3-deoxy-6-phosph 92.3 4.8 0.00016 35.5 15.4 145 196-363 12-159 (205)
152 1mxs_A KDPG aldolase; 2-keto-3 92.3 5.9 0.0002 36.0 16.1 143 199-363 31-175 (225)
153 1vhc_A Putative KHG/KDPG aldol 92.2 6.1 0.00021 35.9 16.0 140 201-363 24-166 (224)
154 2ze3_A DFA0005; organic waste 91.6 4.2 0.00014 38.2 14.6 140 204-354 90-254 (275)
155 1zlp_A PSR132, petal death pro 91.6 2.8 9.7E-05 40.3 13.6 151 193-354 101-279 (318)
156 3lab_A Putative KDPG (2-keto-3 91.5 0.43 1.5E-05 43.5 7.3 96 258-366 22-124 (217)
157 3lab_A Putative KDPG (2-keto-3 91.3 6 0.00021 35.8 14.7 142 199-363 18-168 (217)
158 3oix_A Putative dihydroorotate 91.0 2.8 9.4E-05 40.9 13.0 134 194-336 129-306 (345)
159 1ydn_A Hydroxymethylglutaryl-C 90.9 0.89 3E-05 43.2 9.3 93 257-358 22-137 (295)
160 1ep3_A Dihydroorotate dehydrog 90.7 4.7 0.00016 38.0 14.3 131 195-336 100-272 (311)
161 1xg4_A Probable methylisocitra 90.6 1.6 5.5E-05 41.6 10.7 126 204-337 92-238 (295)
162 1jvn_A Glutamine, bifunctional 90.5 0.34 1.1E-05 50.5 6.3 146 208-358 349-551 (555)
163 2hjp_A Phosphonopyruvate hydro 90.3 6.4 0.00022 37.3 14.6 130 202-335 86-236 (290)
164 1wbh_A KHG/KDPG aldolase; lyas 90.1 10 0.00035 34.1 15.5 141 200-363 22-165 (214)
165 4e38_A Keto-hydroxyglutarate-a 90.0 1.2 4.1E-05 40.9 8.9 94 259-365 44-138 (232)
166 4a3u_A NCR, NADH\:flavin oxido 89.7 3.5 0.00012 40.3 12.6 118 209-333 155-314 (358)
167 4ef8_A Dihydroorotate dehydrog 89.0 2.9 9.8E-05 40.9 11.4 130 194-334 127-306 (354)
168 1yxy_A Putative N-acetylmannos 88.9 9.8 0.00034 34.2 14.4 115 210-334 92-215 (234)
169 4djd_D C/Fe-SP, corrinoid/iron 87.7 4.5 0.00015 39.0 11.5 142 208-360 82-252 (323)
170 1mzh_A Deoxyribose-phosphate a 87.7 4.3 0.00015 36.9 11.0 138 204-354 68-217 (225)
171 1y0e_A Putative N-acetylmannos 87.0 7.9 0.00027 34.5 12.4 110 211-334 80-204 (223)
172 1vrd_A Inosine-5'-monophosphat 86.8 5.4 0.00018 40.5 12.3 117 207-333 237-368 (494)
173 1thf_D HISF protein; thermophI 86.6 1.7 5.8E-05 39.8 7.7 153 194-358 75-249 (253)
174 3i4e_A Isocitrate lyase; struc 86.3 14 0.00047 37.0 14.4 112 194-308 153-315 (439)
175 2qiw_A PEP phosphonomutase; st 85.2 5.3 0.00018 37.1 10.3 92 209-307 96-207 (255)
176 1ydn_A Hydroxymethylglutaryl-C 84.8 18 0.0006 34.0 14.1 146 211-357 84-264 (295)
177 2w6r_A Imidazole glycerol phos 84.6 2.9 9.9E-05 38.6 8.3 159 194-364 75-260 (266)
178 2yci_X 5-methyltetrahydrofolat 82.4 12 0.00041 35.0 11.6 146 204-361 32-206 (271)
179 2v82_A 2-dehydro-3-deoxy-6-pho 82.2 26 0.00087 30.8 14.8 149 194-363 7-157 (212)
180 3n2t_A Putative oxidoreductase 82.1 15 0.0005 35.4 12.6 158 204-366 50-230 (348)
181 1wa3_A 2-keto-3-deoxy-6-phosph 82.0 10 0.00034 33.3 10.5 92 258-363 19-113 (205)
182 2nx9_A Oxaloacetate decarboxyl 82.0 45 0.0016 33.6 16.7 164 204-371 28-218 (464)
183 2h9a_B CO dehydrogenase/acetyl 81.8 14 0.00049 35.2 12.0 145 206-361 74-246 (310)
184 1ka9_F Imidazole glycerol phos 81.6 3.1 0.00011 38.0 7.2 153 193-357 75-249 (252)
185 3eol_A Isocitrate lyase; seatt 80.8 24 0.00081 35.3 13.5 116 193-311 145-314 (433)
186 1vzw_A Phosphoribosyl isomeras 80.6 8.7 0.0003 34.8 9.8 132 194-335 76-223 (244)
187 2y88_A Phosphoribosyl isomeras 80.3 5 0.00017 36.3 8.1 131 194-334 75-225 (244)
188 3lg3_A Isocitrate lyase; conse 79.6 19 0.00066 35.9 12.3 115 194-311 153-319 (435)
189 2ftp_A Hydroxymethylglutaryl-C 79.5 16 0.00056 34.4 11.7 95 256-358 25-141 (302)
190 1nvm_A HOA, 4-hydroxy-2-oxoval 79.2 46 0.0016 31.9 15.5 161 204-373 28-213 (345)
191 1f8m_A Isocitrate lyase, ICL; 78.9 41 0.0014 33.5 14.5 114 194-310 149-314 (429)
192 4exb_A Putative uncharacterize 78.0 36 0.0012 31.8 13.6 154 204-367 68-242 (292)
193 1wv2_A Thiazole moeity, thiazo 77.6 45 0.0015 30.9 14.4 123 198-334 79-216 (265)
194 1f6y_A 5-methyltetrahydrofolat 76.8 47 0.0016 30.7 14.6 147 203-361 22-197 (262)
195 4avf_A Inosine-5'-monophosphat 75.9 43 0.0015 33.9 14.2 132 194-337 218-364 (490)
196 1pz1_A GSP69, general stress p 75.6 28 0.00094 33.2 12.2 158 204-366 32-209 (333)
197 2yw3_A 4-hydroxy-2-oxoglutarat 75.5 43 0.0015 29.6 15.6 144 195-363 14-160 (207)
198 1qo2_A Molecule: N-((5-phospho 75.5 5.5 0.00019 36.2 6.8 131 193-334 73-223 (241)
199 3tsm_A IGPS, indole-3-glycerol 75.3 23 0.00079 33.1 11.1 76 281-361 101-176 (272)
200 3f4w_A Putative hexulose 6 pho 74.5 43 0.0015 29.2 12.7 152 200-363 7-168 (211)
201 3zwt_A Dihydroorotate dehydrog 74.5 29 0.001 33.8 12.1 127 204-336 162-329 (367)
202 1nvm_A HOA, 4-hydroxy-2-oxoval 73.4 23 0.00078 34.1 11.0 142 212-356 99-252 (345)
203 1pyf_A IOLS protein; beta-alph 73.3 14 0.00049 34.8 9.4 158 204-366 33-209 (312)
204 3tdn_A FLR symmetric alpha-bet 72.9 1.8 6.2E-05 39.7 2.8 129 193-333 79-228 (247)
205 3tjl_A NADPH dehydrogenase; OL 72.9 13 0.00045 36.9 9.2 119 209-333 171-345 (407)
206 4fxs_A Inosine-5'-monophosphat 72.3 54 0.0018 33.2 13.9 121 209-339 233-368 (496)
207 1tv5_A Dhodehase, dihydroorota 72.3 83 0.0028 31.4 15.8 80 250-336 300-404 (443)
208 2vp8_A Dihydropteroate synthas 71.3 34 0.0012 32.7 11.4 92 204-309 63-165 (318)
209 1eye_A DHPS 1, dihydropteroate 71.2 36 0.0012 31.8 11.4 144 203-361 26-210 (280)
210 1eep_A Inosine 5'-monophosphat 70.2 53 0.0018 32.1 13.1 117 209-333 155-284 (404)
211 3dz1_A Dihydrodipicolinate syn 70.1 74 0.0025 30.0 17.5 152 204-361 27-200 (313)
212 3s5o_A 4-hydroxy-2-oxoglutarat 69.6 75 0.0026 29.9 16.4 150 204-361 33-203 (307)
213 1q7z_A 5-methyltetrahydrofolat 69.5 23 0.00079 36.7 10.5 146 204-361 338-506 (566)
214 1h5y_A HISF; histidine biosynt 69.4 7.5 0.00026 35.0 6.2 149 194-357 78-251 (253)
215 3i65_A Dihydroorotate dehydrog 69.2 54 0.0018 32.5 12.6 138 194-337 182-377 (415)
216 2ekc_A AQ_1548, tryptophan syn 69.1 70 0.0024 29.3 15.5 156 198-363 23-215 (262)
217 1jcn_A Inosine monophosphate d 68.7 23 0.00078 36.1 10.2 115 208-336 256-389 (514)
218 1o66_A 3-methyl-2-oxobutanoate 68.0 43 0.0015 31.3 11.0 94 204-309 93-201 (275)
219 1tx2_A DHPS, dihydropteroate s 67.9 74 0.0025 30.0 12.9 145 204-362 61-238 (297)
220 1gvf_A Tagatose-bisphosphate a 67.9 42 0.0014 31.5 11.0 115 211-335 89-233 (286)
221 2ftp_A Hydroxymethylglutaryl-C 67.8 80 0.0028 29.5 15.4 146 211-357 88-268 (302)
222 1i4n_A Indole-3-glycerol phosp 67.4 30 0.001 31.8 9.8 97 258-362 61-158 (251)
223 3ble_A Citramalate synthase fr 67.2 82 0.0028 30.1 13.3 157 204-371 39-230 (337)
224 3ble_A Citramalate synthase fr 67.0 33 0.0011 32.9 10.4 102 257-363 37-159 (337)
225 3hbl_A Pyruvate carboxylase; T 66.8 1.7E+02 0.0059 32.9 18.3 164 204-371 553-752 (1150)
226 1rqb_A Transcarboxylase 5S sub 66.6 1.2E+02 0.0041 31.1 16.8 164 204-371 45-237 (539)
227 2ekc_A AQ_1548, tryptophan syn 66.5 44 0.0015 30.7 10.9 98 254-358 24-151 (262)
228 3noy_A 4-hydroxy-3-methylbut-2 65.2 40 0.0014 32.8 10.3 68 203-275 43-111 (366)
229 3vzx_A Heptaprenylglyceryl pho 64.9 41 0.0014 30.5 10.0 74 258-337 137-211 (228)
230 3q94_A Fructose-bisphosphate a 64.9 45 0.0015 31.4 10.6 114 212-335 96-237 (288)
231 2cw6_A Hydroxymethylglutaryl-C 64.8 18 0.00063 34.0 8.0 95 256-358 22-138 (298)
232 3h5d_A DHDPS, dihydrodipicolin 64.2 72 0.0025 30.1 12.2 148 204-360 26-192 (311)
233 2agk_A 1-(5-phosphoribosyl)-5- 63.4 9.7 0.00033 35.3 5.7 117 211-336 89-238 (260)
234 1ydo_A HMG-COA lyase; TIM-barr 63.0 18 0.00063 34.3 7.7 94 257-358 24-139 (307)
235 3usb_A Inosine-5'-monophosphat 62.9 74 0.0025 32.4 12.7 118 208-336 257-390 (511)
236 3r2g_A Inosine 5'-monophosphat 62.7 1.1E+02 0.0039 29.5 14.3 115 205-334 98-228 (361)
237 3eeg_A 2-isopropylmalate synth 62.7 25 0.00085 33.7 8.6 114 257-376 24-157 (325)
238 3s83_A Ggdef family protein; s 62.1 13 0.00045 33.8 6.3 64 302-367 150-221 (259)
239 3khj_A Inosine-5-monophosphate 61.6 1.2E+02 0.0041 29.3 13.8 128 194-334 96-236 (361)
240 4fo4_A Inosine 5'-monophosphat 61.6 1.2E+02 0.0041 29.4 14.2 121 209-337 110-243 (366)
241 3e96_A Dihydrodipicolinate syn 61.3 78 0.0027 29.9 11.8 148 204-360 31-194 (316)
242 1rd5_A Tryptophan synthase alp 61.3 39 0.0013 30.8 9.5 105 255-366 26-155 (262)
243 4a29_A Engineered retro-aldol 60.5 33 0.0011 31.7 8.5 78 279-361 83-160 (258)
244 3sgz_A Hydroxyacid oxidase 2; 59.1 1.3E+02 0.0045 29.0 13.4 75 287-367 204-285 (352)
245 3bg3_A Pyruvate carboxylase, m 58.9 1.9E+02 0.0064 30.8 17.9 165 203-371 122-322 (718)
246 3ajx_A 3-hexulose-6-phosphate 58.4 90 0.0031 26.9 13.4 150 200-363 7-167 (207)
247 4fo4_A Inosine 5'-monophosphat 58.0 1.4E+02 0.0047 28.9 15.5 128 204-365 80-222 (366)
248 4f3h_A Fimxeal, putative uncha 57.8 42 0.0014 30.1 9.0 63 302-366 154-224 (250)
249 3vkj_A Isopentenyl-diphosphate 57.7 1.4E+02 0.0048 28.9 13.9 87 239-334 111-218 (368)
250 1gvf_A Tagatose-bisphosphate a 57.6 20 0.00068 33.8 6.7 56 302-358 72-132 (286)
251 3daq_A DHDPS, dihydrodipicolin 57.3 1.2E+02 0.0042 28.1 14.0 150 204-361 21-189 (292)
252 1pii_A N-(5'phosphoribosyl)ant 57.3 45 0.0015 33.5 9.6 79 279-362 87-165 (452)
253 4gbu_A NADPH dehydrogenase 1; 57.2 46 0.0016 32.7 9.6 46 209-254 175-247 (400)
254 3f4w_A Putative hexulose 6 pho 56.9 18 0.00063 31.7 6.1 95 258-360 10-109 (211)
255 2h9a_A Carbon monoxide dehydro 56.6 1.2E+02 0.0042 30.2 12.7 94 230-338 139-235 (445)
256 1oy0_A Ketopantoate hydroxymet 56.3 52 0.0018 30.8 9.3 95 204-309 110-219 (281)
257 1vc4_A Indole-3-glycerol phosp 56.2 37 0.0013 31.2 8.2 89 265-359 69-159 (254)
258 3lut_A Voltage-gated potassium 55.6 1.5E+02 0.005 28.4 14.0 179 184-367 39-250 (367)
259 3qfe_A Putative dihydrodipicol 55.5 1.4E+02 0.0048 28.2 14.9 151 204-361 30-202 (318)
260 4hb7_A Dihydropteroate synthas 54.9 68 0.0023 29.8 9.8 145 203-361 27-203 (270)
261 3nav_A Tryptophan synthase alp 54.1 1.3E+02 0.0044 27.8 11.7 99 197-297 25-171 (271)
262 1aj0_A DHPS, dihydropteroate s 54.0 1E+02 0.0036 28.7 11.1 92 203-309 35-138 (282)
263 3q58_A N-acetylmannosamine-6-p 53.8 1.2E+02 0.0042 27.1 13.2 106 211-334 93-210 (229)
264 2c6q_A GMP reductase 2; TIM ba 53.7 1E+02 0.0034 29.7 11.3 79 290-374 150-243 (351)
265 2isw_A Putative fructose-1,6-b 53.5 1E+02 0.0036 29.3 11.1 119 212-335 91-256 (323)
266 3q58_A N-acetylmannosamine-6-p 53.5 1.2E+02 0.0043 27.0 12.0 143 201-364 31-191 (229)
267 1rvg_A Fructose-1,6-bisphospha 53.5 1.2E+02 0.0039 28.8 11.3 95 212-312 88-210 (305)
268 4djd_C C/Fe-SP, corrinoid/iron 53.3 1.1E+02 0.0036 30.7 11.4 118 230-361 139-268 (446)
269 1qop_A Tryptophan synthase alp 53.3 69 0.0024 29.4 9.7 100 254-359 24-152 (268)
270 1rqb_A Transcarboxylase 5S sub 52.6 1.2E+02 0.004 31.2 12.0 65 212-276 123-190 (539)
271 1wbh_A KHG/KDPG aldolase; lyas 52.6 1E+02 0.0035 27.3 10.4 93 258-363 25-118 (214)
272 1gte_A Dihydropyrimidine dehyd 52.5 78 0.0027 35.1 11.5 124 203-334 645-816 (1025)
273 3vav_A 3-methyl-2-oxobutanoate 52.1 1.3E+02 0.0044 28.0 11.2 95 203-308 103-212 (275)
274 3qja_A IGPS, indole-3-glycerol 52.0 1.1E+02 0.0036 28.4 10.7 91 265-362 76-170 (272)
275 3rmj_A 2-isopropylmalate synth 51.8 39 0.0013 33.0 8.0 104 257-366 30-153 (370)
276 1vhc_A Putative KHG/KDPG aldol 51.1 1.3E+02 0.0045 26.8 11.0 93 258-363 26-119 (224)
277 1ur3_M Hypothetical oxidoreduc 51.1 87 0.003 29.5 10.3 158 204-366 51-236 (319)
278 3igs_A N-acetylmannosamine-6-p 50.8 81 0.0028 28.4 9.6 93 259-362 34-137 (232)
279 3q94_A Fructose-bisphosphate a 50.6 33 0.0011 32.3 6.9 56 302-358 78-138 (288)
280 2r6o_A Putative diguanylate cy 50.0 25 0.00086 32.9 6.2 74 302-381 174-255 (294)
281 3eau_A Voltage-gated potassium 48.8 1.7E+02 0.0059 27.3 14.9 159 204-367 31-216 (327)
282 3ivs_A Homocitrate synthase, m 48.7 1.7E+02 0.0058 28.9 12.2 98 257-361 57-171 (423)
283 3t7v_A Methylornithine synthas 48.4 44 0.0015 31.8 7.7 41 340-380 187-230 (350)
284 3tr9_A Dihydropteroate synthas 47.3 1.9E+02 0.0065 27.4 15.1 144 203-361 46-235 (314)
285 3ajx_A 3-hexulose-6-phosphate 46.7 60 0.0021 28.1 7.8 93 258-359 10-108 (207)
286 2nx9_A Oxaloacetate decarboxyl 46.5 2.2E+02 0.0074 28.5 12.7 68 204-272 125-198 (464)
287 3igs_A N-acetylmannosamine-6-p 46.4 1.6E+02 0.0055 26.3 13.7 106 211-334 93-210 (232)
288 4g9p_A 4-hydroxy-3-methylbut-2 46.4 50 0.0017 32.5 7.7 59 302-361 79-144 (406)
289 3ffs_A Inosine-5-monophosphate 46.4 2.2E+02 0.0076 27.9 12.6 127 194-334 135-275 (400)
290 3tdn_A FLR symmetric alpha-bet 46.1 57 0.0019 29.3 7.8 43 287-334 66-108 (247)
291 3ijl_A Muconate cycloisomerase 45.9 6.5 0.00022 37.9 1.3 35 35-69 1-35 (338)
292 3n9r_A Fructose-bisphosphate a 45.8 1.5E+02 0.0051 28.0 10.7 96 212-311 90-211 (307)
293 1geq_A Tryptophan synthase alp 45.8 1.5E+02 0.0052 26.3 10.7 113 209-333 98-219 (248)
294 3fkr_A L-2-keto-3-deoxyarabona 45.4 2E+02 0.0067 27.0 16.3 142 204-351 27-189 (309)
295 3k13_A 5-methyltetrahydrofolat 45.4 90 0.0031 29.4 9.2 150 203-361 34-218 (300)
296 3p6l_A Sugar phosphate isomera 44.9 65 0.0022 28.8 8.0 34 327-363 104-137 (262)
297 1zco_A 2-dehydro-3-deoxyphosph 44.4 1.6E+02 0.0055 27.0 10.6 105 248-361 24-137 (262)
298 3n9r_A Fructose-bisphosphate a 44.1 43 0.0015 31.8 6.6 55 303-358 73-132 (307)
299 3ugv_A Enolase; enzyme functio 44.0 6.7 0.00023 38.7 1.1 51 11-68 14-64 (390)
300 3eb2_A Putative dihydrodipicol 43.0 2.1E+02 0.0072 26.6 12.0 149 204-361 23-190 (300)
301 2ztj_A Homocitrate synthase; ( 42.7 1.9E+02 0.0065 28.0 11.4 98 257-361 21-136 (382)
302 1rvg_A Fructose-1,6-bisphospha 42.5 60 0.0021 30.8 7.4 55 303-358 71-130 (305)
303 3d0c_A Dihydrodipicolinate syn 42.5 2.2E+02 0.0075 26.7 14.9 147 204-360 31-194 (314)
304 3t7v_A Methylornithine synthas 41.9 2E+02 0.0068 27.1 11.3 57 204-262 92-154 (350)
305 3pm6_A Putative fructose-bisph 41.9 57 0.0019 31.0 7.1 57 302-358 80-148 (306)
306 4h6q_A Proline dehydrogenase; 41.7 65 0.0022 30.6 7.6 36 326-361 92-138 (312)
307 2bas_A YKUI protein; EAL domai 41.7 64 0.0022 31.9 7.9 63 302-366 168-238 (431)
308 2yw3_A 4-hydroxy-2-oxoglutarat 41.6 1.2E+02 0.0043 26.5 9.1 90 259-362 23-112 (207)
309 3sr7_A Isopentenyl-diphosphate 41.5 1.6E+02 0.0055 28.4 10.6 84 246-334 143-237 (365)
310 3bdk_A D-mannonate dehydratase 41.4 15 0.0005 36.3 3.0 21 341-361 200-220 (386)
311 2z6i_A Trans-2-enoyl-ACP reduc 40.3 2E+02 0.0068 27.1 11.0 107 209-333 78-190 (332)
312 3vk5_A MOEO5; TIM barrel, tran 40.0 1.1E+02 0.0036 28.7 8.5 70 264-338 189-260 (286)
313 1m3u_A 3-methyl-2-oxobutanoate 39.9 61 0.0021 30.1 6.8 93 204-309 92-201 (264)
314 3oa3_A Aldolase; structural ge 39.9 2.4E+02 0.0082 26.4 14.1 141 204-357 124-279 (288)
315 2qr6_A IMP dehydrogenase/GMP r 39.6 2.6E+02 0.009 26.9 12.0 134 204-368 140-291 (393)
316 2vef_A Dihydropteroate synthas 39.5 1.9E+02 0.0066 27.3 10.6 91 204-309 31-134 (314)
317 3mcm_A 2-amino-4-hydroxy-6-hyd 38.7 1.9E+02 0.0066 28.8 10.8 96 203-309 209-320 (442)
318 1gte_A Dihydropyrimidine dehyd 38.2 3.8E+02 0.013 29.5 14.3 97 235-333 622-734 (1025)
319 4gj1_A 1-(5-phosphoribosyl)-5- 38.0 2.2E+02 0.0076 25.5 10.7 143 194-348 76-242 (243)
320 2y5s_A DHPS, dihydropteroate s 37.9 2.3E+02 0.0078 26.5 10.7 92 204-309 44-145 (294)
321 2pge_A MENC; OSBS, NYSGXRC, PS 37.4 12 0.0004 36.6 1.6 37 32-68 2-38 (377)
322 2ztj_A Homocitrate synthase; ( 37.3 2.9E+02 0.01 26.6 15.3 157 204-371 23-206 (382)
323 1vrd_A Inosine-5'-monophosphat 36.6 1.9E+02 0.0065 28.9 10.7 97 263-367 238-353 (494)
324 3s1x_A Probable transaldolase; 36.2 2.4E+02 0.0082 25.3 10.8 112 235-357 43-161 (223)
325 3bw2_A 2-nitropropane dioxygen 36.1 2.9E+02 0.01 26.3 13.5 107 210-333 113-236 (369)
326 2nli_A Lactate oxidase; flavoe 36.1 3E+02 0.01 26.4 12.4 118 204-333 144-312 (368)
327 2isw_A Putative fructose-1,6-b 35.8 70 0.0024 30.5 6.7 55 303-358 74-133 (323)
328 3nvt_A 3-deoxy-D-arabino-heptu 35.8 1.8E+02 0.0061 28.4 9.9 53 302-361 204-256 (385)
329 3si9_A DHDPS, dihydrodipicolin 35.6 2.8E+02 0.0096 26.0 16.5 150 204-361 41-209 (315)
330 4af0_A Inosine-5'-monophosphat 35.5 3.8E+02 0.013 27.4 13.7 140 194-339 270-418 (556)
331 3tak_A DHDPS, dihydrodipicolin 35.5 2.7E+02 0.0092 25.7 16.3 148 204-361 20-187 (291)
332 3na8_A Putative dihydrodipicol 35.4 2.8E+02 0.0097 25.9 15.6 150 204-361 43-211 (315)
333 3b3d_A YTBE protein, putative 35.0 2E+02 0.0067 26.9 9.9 157 203-366 62-233 (314)
334 1mxs_A KDPG aldolase; 2-keto-3 34.7 1.8E+02 0.006 26.0 9.1 91 259-362 36-127 (225)
335 3iix_A Biotin synthetase, puta 34.4 2.5E+02 0.0087 26.1 10.7 22 340-361 177-198 (348)
336 1zfj_A Inosine monophosphate d 34.4 3.1E+02 0.01 27.2 11.8 111 209-333 235-364 (491)
337 2h6r_A Triosephosphate isomera 34.3 1.5E+02 0.005 26.3 8.4 91 260-361 15-118 (219)
338 3rmj_A 2-isopropylmalate synth 34.2 3.2E+02 0.011 26.3 16.0 164 204-371 32-221 (370)
339 3eeg_A 2-isopropylmalate synth 34.0 3E+02 0.01 25.9 17.4 164 204-371 26-215 (325)
340 1jcn_A Inosine monophosphate d 34.0 2.5E+02 0.0084 28.2 11.1 95 264-366 257-370 (514)
341 1ypf_A GMP reductase; GUAC, pu 33.8 3.1E+02 0.01 25.8 13.1 121 205-337 105-242 (336)
342 3m5v_A DHDPS, dihydrodipicolin 33.7 2.9E+02 0.01 25.6 17.3 149 204-361 26-194 (301)
343 1r30_A Biotin synthase; SAM ra 33.7 3E+02 0.01 26.0 11.2 41 340-380 193-236 (369)
344 3bg3_A Pyruvate carboxylase, m 33.3 1.7E+02 0.0059 31.1 9.9 101 209-309 200-310 (718)
345 3khj_A Inosine-5-monophosphate 33.1 3.3E+02 0.011 26.1 17.9 122 230-366 79-219 (361)
346 2dqw_A Dihydropteroate synthas 33.1 3.1E+02 0.01 25.6 15.7 143 204-361 50-230 (294)
347 1p0k_A Isopentenyl-diphosphate 33.0 3.2E+02 0.011 25.8 14.2 129 194-334 117-280 (349)
348 1x7f_A Outer surface protein; 32.9 2.1E+02 0.0072 27.9 9.7 143 204-358 39-201 (385)
349 1w8s_A FBP aldolase, fructose- 32.9 2.8E+02 0.0097 25.2 11.1 111 210-327 96-225 (263)
350 2p0o_A Hypothetical protein DU 32.8 3.5E+02 0.012 26.2 12.5 141 204-358 15-175 (372)
351 2a1i_A DNA excision repair pro 32.0 2E+02 0.0069 24.0 8.1 67 204-275 68-136 (146)
352 1xm3_A Thiazole biosynthesis p 32.0 2.9E+02 0.0099 25.0 13.2 121 201-335 74-208 (264)
353 3jr2_A Hexulose-6-phosphate sy 32.0 2.6E+02 0.0087 24.4 13.8 156 199-363 12-175 (218)
354 1ypf_A GMP reductase; GUAC, pu 32.0 3.3E+02 0.011 25.6 12.8 102 264-371 108-227 (336)
355 2yci_X 5-methyltetrahydrofolat 31.8 2.5E+02 0.0085 25.8 9.8 14 343-356 149-162 (271)
356 3chv_A Prokaryotic domain of u 31.2 1.9E+02 0.0067 26.9 8.9 59 204-262 32-98 (284)
357 3ewb_X 2-isopropylmalate synth 31.2 3.2E+02 0.011 25.3 16.2 161 204-370 25-213 (293)
358 4avf_A Inosine-5'-monophosphat 31.0 2.5E+02 0.0086 28.1 10.4 95 263-365 230-343 (490)
359 3dxi_A Putative aldolase; TIM 30.9 2.4E+02 0.0081 26.7 9.6 101 255-361 18-134 (320)
360 3lmz_A Putative sugar isomeras 30.8 73 0.0025 28.4 5.9 21 342-362 114-134 (257)
361 3ffs_A Inosine-5-monophosphate 30.1 2.6E+02 0.0089 27.3 10.1 62 302-365 182-257 (400)
362 2ekg_A Proline dehydrogenase/d 30.1 1.4E+02 0.0047 28.5 7.8 36 326-361 111-154 (327)
363 2zbt_A Pyridoxal biosynthesis 30.0 25 0.00087 32.8 2.6 46 288-338 195-242 (297)
364 3usb_A Inosine-5'-monophosphat 29.9 2.7E+02 0.0091 28.1 10.4 98 263-366 257-371 (511)
365 4ezb_A Uncharacterized conserv 29.4 1.9E+02 0.0065 26.9 8.8 109 234-357 100-223 (317)
366 3v0s_A Perakine reductase; AKR 29.2 57 0.002 31.0 5.0 74 289-367 138-211 (337)
367 1ujp_A Tryptophan synthase alp 29.2 3.3E+02 0.011 24.9 10.6 121 234-365 79-213 (271)
368 3pjx_A Cyclic dimeric GMP bind 29.1 40 0.0014 33.0 4.0 114 259-381 289-415 (430)
369 1h1y_A D-ribulose-5-phosphate 29.0 2.7E+02 0.0092 24.4 9.3 116 203-334 74-201 (228)
370 3l21_A DHDPS, dihydrodipicolin 28.8 3.6E+02 0.012 25.0 18.2 146 204-360 34-198 (304)
371 1kbi_A Cytochrome B2, L-LCR; f 28.6 4.3E+02 0.015 26.6 11.7 125 202-334 256-432 (511)
372 3cwo_X Beta/alpha-barrel prote 28.5 1.4E+02 0.0049 25.5 7.3 141 211-357 67-227 (237)
373 2y7e_A 3-keto-5-aminohexanoate 28.2 2.5E+02 0.0084 26.1 9.0 154 204-362 32-213 (282)
374 1vcf_A Isopentenyl-diphosphate 27.3 3.9E+02 0.013 25.0 11.6 114 204-333 133-284 (332)
375 3w01_A Heptaprenylglyceryl pho 27.1 3.2E+02 0.011 24.6 9.4 73 259-337 143-217 (235)
376 1eep_A Inosine 5'-monophosphat 27.1 3.1E+02 0.011 26.4 10.1 63 302-366 191-268 (404)
377 3vav_A 3-methyl-2-oxobutanoate 27.0 3.8E+02 0.013 24.8 10.7 88 216-310 46-148 (275)
378 2ozt_A TLR1174 protein; struct 26.8 17 0.00059 34.8 0.8 35 34-68 2-36 (332)
379 1dos_A Aldolase class II; lyas 26.8 90 0.0031 30.3 5.9 141 203-358 12-172 (358)
380 3ewb_X 2-isopropylmalate synth 26.4 3.9E+02 0.013 24.7 11.5 54 256-309 145-202 (293)
381 3nvt_A 3-deoxy-D-arabino-heptu 26.1 4.6E+02 0.016 25.4 11.4 143 201-359 151-316 (385)
382 2wqp_A Polysialic acid capsule 26.0 2.8E+02 0.0096 26.6 9.2 144 203-361 32-214 (349)
383 4af0_A Inosine-5'-monophosphat 25.9 5.5E+02 0.019 26.3 13.2 58 304-363 322-393 (556)
384 1ujp_A Tryptophan synthase alp 25.9 1.8E+02 0.0063 26.7 7.7 56 300-359 87-149 (271)
385 3cpr_A Dihydrodipicolinate syn 25.8 4E+02 0.014 24.7 18.2 147 204-361 35-200 (304)
386 3qze_A DHDPS, dihydrodipicolin 25.8 4.1E+02 0.014 24.8 16.2 149 204-361 42-209 (314)
387 1ynp_A Oxidoreductase, AKR11C1 25.7 88 0.003 29.4 5.6 83 278-366 136-222 (317)
388 2gjl_A Hypothetical protein PA 25.5 4.1E+02 0.014 24.7 13.3 108 209-334 86-201 (328)
389 3qm3_A Fructose-bisphosphate a 25.4 1.1E+02 0.0038 29.6 6.2 132 203-358 15-170 (357)
390 3erp_A Putative oxidoreductase 25.1 4.3E+02 0.015 24.8 13.1 158 204-366 62-248 (353)
391 3nav_A Tryptophan synthase alp 25.1 3.2E+02 0.011 25.1 9.2 54 303-360 96-156 (271)
392 3toy_A Mandelate racemase/muco 24.9 20 0.00069 35.0 0.9 50 11-68 14-63 (383)
393 3cuq_A Vacuolar-sorting protei 24.9 39 0.0013 30.8 2.7 79 203-284 115-204 (234)
394 2nzl_A Hydroxyacid oxidase 1; 24.8 4.8E+02 0.016 25.2 12.0 120 204-333 158-335 (392)
395 3sy8_A ROCR; TIM barrel phosph 24.7 78 0.0027 30.6 5.2 64 302-367 287-358 (400)
396 1vr6_A Phospho-2-dehydro-3-deo 24.7 4.7E+02 0.016 25.0 11.3 142 202-359 116-280 (350)
397 3flu_A DHDPS, dihydrodipicolin 24.6 4.2E+02 0.014 24.4 16.3 148 204-360 26-192 (297)
398 3hbl_A Pyruvate carboxylase; T 24.1 4.3E+02 0.015 29.7 11.6 101 209-309 630-740 (1150)
399 2htm_A Thiazole biosynthesis p 24.0 4.3E+02 0.015 24.4 10.4 123 198-334 69-207 (268)
400 1to3_A Putative aldolase YIHT; 23.9 4.4E+02 0.015 24.5 13.6 118 212-332 114-252 (304)
401 3can_A Pyruvate-formate lyase- 23.6 3.1E+02 0.011 22.7 10.4 147 205-360 18-181 (182)
402 1qwk_A Aldose reductase, aldo- 23.6 4.4E+02 0.015 24.3 10.3 154 204-366 27-207 (317)
403 1vzw_A Phosphoribosyl isomeras 23.5 2.8E+02 0.0095 24.4 8.4 41 290-335 65-105 (244)
404 1vli_A Spore coat polysacchari 23.5 2.7E+02 0.0091 27.2 8.6 25 203-227 41-65 (385)
405 3pzs_A PM kinase, pyridoxamine 23.4 4.2E+02 0.014 24.0 10.3 62 204-268 58-135 (289)
406 1gox_A (S)-2-hydroxy-acid oxid 23.3 4.9E+02 0.017 24.8 13.4 118 204-333 134-308 (370)
407 2c6q_A GMP reductase 2; TIM ba 23.3 4.8E+02 0.017 24.7 11.6 119 210-336 121-254 (351)
408 2yxg_A DHDPS, dihydrodipicolin 23.3 4.3E+02 0.015 24.2 17.3 147 204-360 19-184 (289)
409 4gmf_A Yersiniabactin biosynth 22.7 1E+02 0.0036 29.8 5.6 81 265-350 85-174 (372)
410 1h2i_A RAD52, DNA repair prote 22.3 2.7E+02 0.0093 24.7 7.6 73 33-113 41-130 (209)
411 3b4u_A Dihydrodipicolinate syn 22.3 4.6E+02 0.016 24.1 16.7 148 204-360 22-193 (294)
412 3elf_A Fructose-bisphosphate a 22.3 4.2E+02 0.014 25.4 9.6 122 211-335 116-277 (349)
413 1o5k_A DHDPS, dihydrodipicolin 22.1 4.7E+02 0.016 24.2 18.3 151 204-361 31-202 (306)
414 1yx1_A Hypothetical protein PA 21.8 1.7E+02 0.0057 26.0 6.6 104 236-363 27-134 (264)
415 3h74_A Pyridoxal kinase; PSI-I 21.8 1.7E+02 0.0059 26.8 6.7 66 206-272 59-133 (282)
416 2fiq_A Putative tagatose 6-pho 21.7 5.8E+02 0.02 25.1 12.7 121 210-336 108-283 (420)
417 3iix_A Biotin synthetase, puta 21.6 4.8E+02 0.016 24.0 11.7 60 204-266 85-148 (348)
418 3hvb_A Protein FIMX; EAL phosp 21.5 1.9E+02 0.0065 28.1 7.3 74 302-381 333-413 (437)
419 1h5y_A HISF; histidine biosynt 21.3 1.6E+02 0.0054 25.8 6.2 59 290-355 67-125 (253)
420 3elf_A Fructose-bisphosphate a 21.3 2.4E+02 0.0081 27.2 7.6 139 202-358 3-159 (349)
421 1zco_A 2-dehydro-3-deoxyphosph 21.2 4.6E+02 0.016 23.8 9.4 147 202-363 33-201 (262)
422 3n6q_A YGHZ aldo-keto reductas 21.1 4.1E+02 0.014 24.8 9.5 73 289-366 150-228 (346)
423 2f6u_A GGGPS, (S)-3-O-geranylg 21.0 3.6E+02 0.012 24.2 8.5 69 259-333 147-217 (234)
424 1qop_A Tryptophan synthase alp 21.0 4.6E+02 0.016 23.6 12.8 113 210-334 113-234 (268)
425 2q02_A Putative cytoplasmic pr 20.9 1.9E+02 0.0065 25.5 6.7 21 342-362 121-141 (272)
426 3jr2_A Hexulose-6-phosphate sy 20.9 4.1E+02 0.014 23.0 9.0 113 211-338 75-198 (218)
427 2wkj_A N-acetylneuraminate lya 20.7 5E+02 0.017 23.9 16.7 147 204-360 30-196 (303)
428 2vc6_A MOSA, dihydrodipicolina 20.5 5E+02 0.017 23.8 15.6 149 204-360 19-186 (292)
429 1vs1_A 3-deoxy-7-phosphoheptul 20.4 5E+02 0.017 23.8 10.6 119 259-386 50-180 (276)
430 1f6y_A 5-methyltetrahydrofolat 20.3 4.9E+02 0.017 23.6 10.7 21 234-257 27-47 (262)
431 3k13_A 5-methyltetrahydrofolat 20.2 5.3E+02 0.018 24.0 11.0 57 303-362 83-141 (300)
432 1u5t_B Defective in vacuolar p 20.1 88 0.003 26.8 3.9 80 203-284 60-156 (169)
433 3cuq_B Vacuolar protein-sortin 20.1 44 0.0015 30.0 2.1 80 203-284 114-204 (218)
434 1ub3_A Aldolase protein; schif 20.0 4.6E+02 0.016 23.2 13.3 128 204-347 69-211 (220)
435 2qf7_A Pyruvate carboxylase pr 20.0 4.3E+02 0.015 29.7 10.5 138 203-340 642-788 (1165)
No 1
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=100.00 E-value=2.3e-76 Score=599.55 Aligned_cols=357 Identities=32% Similarity=0.510 Sum_probs=314.6
Q ss_pred CcceeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHHHhhHhcCC
Q 014285 61 ETFWVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVREACQFLRQS 139 (427)
Q Consensus 61 ~~~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~~~~~l~g~ 139 (427)
.+-.|||++|+++++++|++.||.++.++.+.++.++|+|+|++|++|||||.+.|.+++++.+ ....++.++|.|+|+
T Consensus 23 m~~~mkI~~i~~~~~~~Pl~~p~~~a~g~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~l~p~l~G~ 102 (393)
T 3u9i_A 23 MTAPTTIRALTVAPLDIPLHEPFGIASGAQEVARNLLVAVELTDGTRGYGEAAPFPAFNGETQDMAHAAILAARSLVEGA 102 (393)
T ss_dssp -CCTTBEEEEEEEEEEEEBCC----------EEEEEEEEEEETTSCEEEEEECCCHHHHSCCHHHHHHHHHHTHHHHTTS
T ss_pred cccCcEEEEEEEEEEEEecCCceEccCceEEeeeEEEEEEEECCCCEEEEEeeCCCCcCcCCHHHHHHHHHHHHHHhcCC
Confidence 3344999999999999999999999999999999999999999999999999988766665433 334456789999999
Q ss_pred CCCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 140 PPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 140 ~~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
++.+++.+|+.|++...+ .+++++||||||||++||..|+|||+||||.++++|+|++++..+++++.+++++++++|
T Consensus 103 d~~~~~~~~~~l~~~~~~--~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~~~v~~~~t~~~~~~e~~~~~a~~~~~~G 180 (393)
T 3u9i_A 103 DVREWRRIALALPALPGM--TGSARCAIETAILDALTRRARLPLWAFFGGAATSLETDVTITTGSVTAAARAAQAIVARG 180 (393)
T ss_dssp BGGGHHHHHHHGGGSTTC--CHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSCSEEECCEEEC---CHHHHHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceEEEEEecCCCHHHHHHHHHHHHHcC
Confidence 999999999999765443 368999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCC---------chhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHh--hhCCCCCceEeCCCCCCC
Q 014285 220 FSTLKLNVGRN---------ITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKL--NDMGVIPVLFEQPVHRDD 288 (427)
Q Consensus 220 f~~iKlKiG~~---------~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L--~~~~l~~~~iEqP~~~~d 288 (427)
|++||+|+|.+ +++|++++++||+..|++.||||||++|++++|++++++| +++++ .|||||++++|
T Consensus 181 f~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~w~~~~A~~~~~~L~~~~~~i--~~iEeP~~~~d 258 (393)
T 3u9i_A 181 VTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPTARLILDGNCGYTAPDALRLLDMLGVHGIVP--ALFEQPVAKDD 258 (393)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSCCCHHHHHHHHHTTTTTTCCC--SEEECCSCTTC
T ss_pred CCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCCCCeEEEEccCCCCHHHHHHHHHHHhhCCCCe--EEEECCCCCCc
Confidence 99999999975 8899999999999878999999999999999999999999 88887 59999999999
Q ss_pred hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhH
Q 014285 289 WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 289 ~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
+++|++|++ ++++|||+||++.+..+++++++.+++|++|+|+++ | ++++++++++|+++|+++++||++||+|
T Consensus 259 ~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~-GGit~~~~ia~~A~~~gi~~~~~~~~es~i 333 (393)
T 3u9i_A 259 EEGLRRLTA----TRRVPVAADESVASATDAARLARNAAVDVLNIKLMK-CGIVEALDIAAIARTAGLHLMIGGMVESLL 333 (393)
T ss_dssp TTHHHHHHH----TCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECCSSCCHH
T ss_pred HHHHHHHHh----hCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-cCHHHHHHHHHHHHHcCCeEEecCCcccHH
Confidence 999999986 789999999999999999999999999999999999 9 9999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCC-CCCcccccCCCcC
Q 014285 368 ATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTN-ARGQGGFLKWTIV 426 (427)
Q Consensus 368 g~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~-~pGlGve~d~~~v 426 (427)
|+++++|++++++|+.|.|+++++.+.++++.+++.++||++.+|+ +||||||+|+++|
T Consensus 334 g~aa~~hlaaa~p~~~~~el~~~~~~~~d~~~~~~~~~~G~i~~p~~~PGlGve~d~~~l 393 (393)
T 3u9i_A 334 AMTVSACFAAGQGGFRFVDLDTPLFLAENPFDGGMTYHGGTIDLTLIEAGHGVTPRSPAL 393 (393)
T ss_dssp HHHHHHHHHHHHCCEEEECCCGGGSBSCCCEEESCEEETTEEECTTCCSBTCEEEC----
T ss_pred HHHHHHHHHhcCCCCCeecccchhhhhhcccCCCceeECCEEECCCCCCcCCcccCcccC
Confidence 9999999999999999999999988888998888999999999999 9999999999975
No 2
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=100.00 E-value=2.2e-75 Score=588.39 Aligned_cols=354 Identities=24% Similarity=0.403 Sum_probs=331.9
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHHHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVREACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~~~~~l~g~~~~~ 143 (427)
|||++++++.+++|+++||.++.++++.++.++|+|+|++|++|||||.+.|.+++++.+ ....++.+.|.|+|+++.+
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~~~~l~~~l~G~d~~~ 80 (368)
T 3q45_A 1 MIITQVELYKSPVKLKEPFKISLGILTHANNVIVRIHTASGHIGYGECSPFMTIHGESMDTAFIVGQYLAKGLIGTSCLD 80 (368)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCEEEEEECCCHHHHSCCHHHHHHHHHHHHHHHTTSBTTC
T ss_pred CEEEEEEEEEEEeecCCCEEccCceEeeeeEEEEEEEECCCCEEEeeccCCCCcCCCCHHHHHHHHHHHHHHhcCCChhh
Confidence 899999999999999999999999999999999999999999999999987766654433 3344567899999999999
Q ss_pred HHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCce-eeeeeecCCCHHHHHHHHHHHhhcCCcE
Q 014285 144 LNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSL-STAITIPAVSPAEASELASKYCKLGFST 222 (427)
Q Consensus 144 ~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~i-p~~~~i~~~~~~~~~~~~~~~~~~Gf~~ 222 (427)
++.+|+.|++.+.++ +++++||||||||++||..|+|||+||||.++++ |+|+++++.+++++.+++++++++||++
T Consensus 81 ~~~~~~~l~~~~~~~--~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~v~~~~~~~~~~~~e~~~~~a~~~~~~G~~~ 158 (368)
T 3q45_A 81 IVSNSLLMDAIIYGN--SCIKSAFNIALYDLAAQHAGLPLYAFLGGKKDKIIQTDYTVSIDEPHKMAADAVQIKKNGFEI 158 (368)
T ss_dssp HHHHHHHHHHHCSCC--HHHHHHHHHHHHHHHHHHHTSBHHHHTTCCCCSCEEBCEEECSCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCeeeeeEEEecCCCHHHHHHHHHHHHHcCCCe
Confidence 999999998876554 5799999999999999999999999999998889 9999999999999999999999999999
Q ss_pred EEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhcc
Q 014285 223 LKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARD 301 (427)
Q Consensus 223 iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~ 301 (427)
||+|+|.++++|++++++||+ .++++.|+||||++|++++|++++++|+++++ .|||||++++|++++++|++
T Consensus 159 ~K~KvG~~~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i--~~iEqP~~~~~~~~~~~l~~---- 232 (368)
T 3q45_A 159 IKVKVGGSKELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNI--QHCEEPVSRNLYTALPKIRQ---- 232 (368)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCC--SCEECCBCGGGGGGHHHHHH----
T ss_pred EEEEecCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCC--CEEECCCChhHHHHHHHHHh----
Confidence 999999999999999999999 57999999999999999999999999999997 49999999999999999986
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcC
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLG 380 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~ 380 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++||++||+|+++|++|++++++
T Consensus 233 ~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~hlaaa~p 312 (368)
T 3q45_A 233 ACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGGFLESRLGFTAAAHVALVSK 312 (368)
T ss_dssp TCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCSSCCHHHHHHHHHHHTTCT
T ss_pred hCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecCccccHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999999997 99999999999999999999999999999999999999999
Q ss_pred CcceeccCCCcccccCCCCCceeeeCc-EEecCCCCCcccccCCCcC
Q 014285 381 CIKYVNLNTPFLLSEDPFVGGCEVSGA-IYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 381 ~~~~~e~~~p~~~~~~~~~~~~~~~~G-~i~~p~~pGlGve~d~~~v 426 (427)
|..++|+++|+.+.+|++.+++.++|| ++.+|++||||+|+|+++|
T Consensus 313 ~~~~~el~~~~~~~~d~~~~~~~~~~gG~i~~p~~PGlGv~~d~~~l 359 (368)
T 3q45_A 313 TICYYDFDTPLMFEADPVRGGIVYQQRGIIEVPETAGLGAGYQKDYL 359 (368)
T ss_dssp TEEEECCCGGGGBSSCCEEESCEECGGGEEECCCSSBSCEEECTTTG
T ss_pred CCceeccccHHhhhhccccCCceecCCeEEEcCCCCccceeeCHHHH
Confidence 999999999988888988888889988 9999999999999999986
No 3
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=100.00 E-value=7.7e-76 Score=595.20 Aligned_cols=355 Identities=35% Similarity=0.566 Sum_probs=327.7
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHHHhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVREACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~~~~~l~g~~~~ 142 (427)
.|||++|+++++++|++.||.++.++.+.++.++|+|+|++|++|||||.+.|.+++++.+ ....++.+.|.|+|+++.
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~l~~~l~G~d~~ 83 (389)
T 3s5s_A 4 PTLIRRVSIEALDIPLHEPFGIAGGAQERAANLLVTVELADGTLGFGEAAPLPAFNGETQDGSRAAAVSLREAVVGSDAR 83 (389)
T ss_dssp TTBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCHHHHSCCHHHHHHHHHHTHHHHTTSBGG
T ss_pred CCEEEEEEEEEEEEecCCceeccCceEEeeeEEEEEEEECCCCEEEEeccCCCCcCccCHHHHHHHHHHHHHHhcCCCcc
Confidence 3899999999999999999999999999999999999999999999999988766665433 334456789999999999
Q ss_pred CHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcE
Q 014285 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFST 222 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~ 222 (427)
+++.+|+.|++.+.+.. .++++|||||||||+||..|+|||+||||.++++|+|++++..+++++.+++++++++||++
T Consensus 84 ~~~~~~~~l~~~~~~~~-~~A~said~ALwDl~gk~~g~Pl~~LLGg~~~~v~~~~t~~~~~~e~~~~~a~~~~~~G~~~ 162 (389)
T 3s5s_A 84 AWRAVARALREASGGGA-GAARCAIETAILDALTKRAGMPLWAFFGGSGTALTTDITITTGSPERAEEAARRAAAMGFRA 162 (389)
T ss_dssp GHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHTTTCBHHHHTTCSCSEEECCEEECSSCSHHHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHhhccCh-HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceEEEeeecCCCHHHHHHHHHHHHHcCCCe
Confidence 99999999987654442 27899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCC-chhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHh--hhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 223 LKLNVGRN-ITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKL--NDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 223 iKlKiG~~-~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L--~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
||+|+|.+ +++|++++++||+..|++.||||||++|++++|++++++| +++++ .|||||++++|++++++|++
T Consensus 163 iKlKvg~~~~~~d~~~v~avR~~~~~~~L~vDaN~~w~~~~A~~~~~~L~~~~~~i--~~iEeP~~~~d~~~~~~l~~-- 238 (389)
T 3s5s_A 163 LKVKVGGRLAASDPARIEAIHAAAPGASLILDGNGGLTAGEALALVAHARRLGADV--ALLEQPVPRDDWDGMKEVTR-- 238 (389)
T ss_dssp EEEECCGGGTTTHHHHHHHHHHHCTTCEEEEECTTCSCHHHHHHHHHHHHHTTCEE--EEEECCSCTTCHHHHHHHHH--
T ss_pred EEEEecCCChHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCe--EEEECCCCcccHHHHHHHHh--
Confidence 99999975 8999999999999878999999999999999999999999 88876 59999999999999999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++|||+||++.+..+++++++.+++|++|+|+++ | ++++++++++|+++|+++++||++||+||+++++|++++
T Consensus 239 --~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~-GGit~~~~i~~~A~~~gi~~~~~~~~es~ig~aa~~hlaaa 315 (389)
T 3s5s_A 239 --RAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK-GGIAEALDIAAVARAAGLGLMIGGMVESVLAMTASACFAAG 315 (389)
T ss_dssp --HSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH-HHHHHHHHHHHHHHHTTCEEEECCSSCCHHHHHHHHHHHHH
T ss_pred --hCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcCCeEEecCCcccHHHHHHHHHHHhh
Confidence 689999999999999999999999999999999999 9 999999999999999999999999999999999999999
Q ss_pred cCCcceeccCCCcccccCCCCCceeeeCcEEecCC-CCCcccccCCCcC
Q 014285 379 LGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTN-ARGQGGFLKWTIV 426 (427)
Q Consensus 379 l~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~-~pGlGve~d~~~v 426 (427)
++|+.|.|++++..+.++++.+++.++||++.+|+ +||||||+|+++|
T Consensus 316 ~p~~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~~PGlGve~d~~~~ 364 (389)
T 3s5s_A 316 LGGFSFVDLDTPLFLAENPFDGGFVQRGPALSLEGIRAGHGVTPQRRSP 364 (389)
T ss_dssp HCCEEEECCCGGGGBSCCCEECSCEEETTEEECTTCCSBTCCEEC----
T ss_pred CCCCCeeeccchhhhhhccccCCceeECCEEECCCCCCcCCcccCHHHH
Confidence 99999999999988888999889999999999999 9999999999986
No 4
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=100.00 E-value=2.6e-75 Score=589.13 Aligned_cols=354 Identities=22% Similarity=0.336 Sum_probs=329.7
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHH-HHHHHH-HhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKA-LVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~-~~~~~~-~~~~l~g~~~~ 142 (427)
|||++|+++.+++|++.||+++.++.+.++.++|+|+|++|++||||+.+.+.+++++.+. ...+++ +.|.|+|+++.
T Consensus 3 MkI~~i~~~~~~~Pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~Ge~~~~~~~~get~~~~~~~i~~~l~p~l~G~d~~ 82 (379)
T 3r0u_A 3 SKIIDIKTSIIKIPLKRTFITAVRSTNHIDSLAVELTLDNGVKGYGVAPATTAITGDTLQGMQYIIREIFAPVILGSDLS 82 (379)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECCHHHHCCCHHHHHHHHHHTTHHHHTTCBGG
T ss_pred CEEEEEEEEEEEeecCCceEccCceEEEeEEEEEEEEECCCCEEEEEEECCCCccCCCHHHHHHHHHHHhHHHhcCCCcc
Confidence 8999999999999999999999999999999999999999999999999876565654433 333454 78999999999
Q ss_pred CHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcE
Q 014285 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFST 222 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~ 222 (427)
+++.+|+.|++...+ .+++++|||||||||+||..|+|||+||||.+++||+|++++..+++++.+++++++++||++
T Consensus 83 ~~~~~~~~~~~~~~~--~~~A~said~ALwDl~gK~~g~Pv~~LLGg~r~~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~ 160 (379)
T 3r0u_A 83 DYKQTLELAFKKVMF--NSAAKMAIDLAYHDLLAKEQDISVAKLLGAKANSIVTDVSISCGNVAETIQNIQNGVEANFTA 160 (379)
T ss_dssp GHHHHHHHHHTTCSS--CHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCCEEEBCEEECCCCHHHHHHHHHHHHHTTCCE
T ss_pred cHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCeEEEEEEecCCCHHHHHHHHHHHHHcCCCE
Confidence 999999999875443 367999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhh--CCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 223 LKLNVGRNITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLND--MGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 223 iKlKiG~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~--~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
||+|+|.++++|++++++||+. ++++.|+||||++|++++|++++++|++ +++ .|||||++++|++++++|++
T Consensus 161 ~KlK~g~~~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l--~~iEeP~~~~d~~~~~~l~~-- 236 (379)
T 3r0u_A 161 IKVKTGADFNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNV--EIIEQPVKYYDIKAMAEITK-- 236 (379)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCE--EEEECCSCTTCHHHHHHHHH--
T ss_pred EeeecCCCHHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCc--EEEECCCCcccHHHHHHHHh--
Confidence 9999999999999999999995 6799999999999999999999999999 665 69999999999999999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++||++||+|+++|++|++++
T Consensus 237 --~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hlaaa 314 (379)
T 3r0u_A 237 --FSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGCMMESPAGILATASFALA 314 (379)
T ss_dssp --HCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHHHHHHH
T ss_pred --cCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeCCCccHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999999997 999999999999999999999999999999999999999
Q ss_pred cCCcceeccCCCcccccCCCCCceeeeCcEEecCC-CCCcccccCCCcCC
Q 014285 379 LGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTN-ARGQGGFLKWTIVS 427 (427)
Q Consensus 379 l~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~-~pGlGve~d~~~v~ 427 (427)
+|+.+.|+++|..+.+|++.+++.++||++.+|+ +||||||+|+++|.
T Consensus 315 -p~~~~~eld~~~~~~~d~~~~~~~~~~G~i~~p~~~PGLGveld~~~~~ 363 (379)
T 3r0u_A 315 -EDITVADLDPLDWVAKDLYSDYITFNEPNIILKDNLKGFGFNLAENLYF 363 (379)
T ss_dssp -TTCCCBCCGGGGGSCGGGTTTTEEEETTEEEECTTCSBTSCCCHHHHTC
T ss_pred -CCCCeeecCchhhhhhccccCCceEECCEEEcCCCCCccceeECHHHHh
Confidence 9999999999988888999999999999999999 89999999998763
No 5
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=100.00 E-value=1.8e-74 Score=580.98 Aligned_cols=349 Identities=33% Similarity=0.561 Sum_probs=320.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHHHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVREACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~~~~~l~g~~~~~ 143 (427)
|||++++++++++|+++||.++.++.+.++.++|+|+|++|++|||||.+.|.|++++.+ ....++.+.|.|+|+++.+
T Consensus 5 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~l~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~l~~~l~G~d~~~ 84 (365)
T 3ik4_A 5 TTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGTLGLGEAAPFPAVSGETQTGTSAAIERLQSHLLGADVRG 84 (365)
T ss_dssp TBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSCEEEEEECCCCTTTCCCHHHHHHHHHHHGGGTTTCBGGG
T ss_pred CEEEEEEEEEEEEecCCCeEccCeEEEeeeEEEEEEEECCCCEEEEecccCCCcCcCCHHHHHHHHHHHHHHHcCCCccC
Confidence 899999999999999999999999999999999999999999999999998888775433 3344567899999999999
Q ss_pred HHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcEE
Q 014285 144 LNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTL 223 (427)
Q Consensus 144 ~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~i 223 (427)
++.+|+.|++.+.+. +++++||||||||++||..|+|||+||||.++++|+|++++..+++++.+++++++++||++|
T Consensus 85 ~~~~~~~l~~~~~~~--~~a~said~ALwDl~gk~~g~Pl~~LLGg~~~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~i 162 (365)
T 3ik4_A 85 WRKLAAMLDHAEHEA--AAARCGLEMAMLDALTRHYHMPLHVFFGGVSKQLETDMTITAGDEVHAAASAKAILARGIKSI 162 (365)
T ss_dssp HHHHHHHHHHHCTTC--HHHHHHHHHHHHHHHHHHTTCBHHHHTTCSCSEEEBCEEECCSCHHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceeeeEEecCCCHHHHHHHHHHHHHcCCCEE
Confidence 999999998766543 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCC-chhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHh--hhCCCCCceEeCCCCCCChhhHHHHHHhhc
Q 014285 224 KLNVGRN-ITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKL--NDMGVIPVLFEQPVHRDDWSGLHDVSNFAR 300 (427)
Q Consensus 224 KlKiG~~-~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L--~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r 300 (427)
|+|+|.+ +++|++++++||+..|++.||||||++|++++|++++++| +++++ .|||||++++|++++++|++
T Consensus 163 K~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~i--~~iEeP~~~~d~~~~~~l~~--- 237 (365)
T 3ik4_A 163 KVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNCGYDVERALAFCAACKAESIPM--VLFEQPLPREDWAGMAQVTA--- 237 (365)
T ss_dssp EEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTTCCCHHHHHHHHHHHHHTTCCE--EEEECCSCTTCHHHHHHHHH---
T ss_pred EEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCc--eEEECCCCcccHHHHHHHHh---
Confidence 9999985 8999999999999878899999999999999999999999 88886 59999999999999999986
Q ss_pred cccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhc
Q 014285 301 DTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGL 379 (427)
Q Consensus 301 ~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal 379 (427)
++++||++||++.+..+++++++.+++|++|+|+++ | ++++++++++|+++|+++++||++||+||+++++|+++++
T Consensus 238 -~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~gi~~~~~~~~es~ig~aa~~hlaaa~ 315 (365)
T 3ik4_A 238 -QSGFAVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMIGGMVESILAMSFSANLAAGN 315 (365)
T ss_dssp -HSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred -hCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHcCCeEEecCCcccHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999999 9 9999999999999999999999999999999999999999
Q ss_pred CCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccC
Q 014285 380 GCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLK 422 (427)
Q Consensus 380 ~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d 422 (427)
+|+.|.|+++++.+.+|++.+++.++||++.+|++||||+|+.
T Consensus 316 p~~~~~el~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGve~~ 358 (365)
T 3ik4_A 316 GGFDFIDLDTPLFIAEHPFIGGFAQTGGTLQLADVAGHGVNLE 358 (365)
T ss_dssp CCEEEECCCGGGGBSCCSEEESCEEETTEEECCSCSBTCEEEC
T ss_pred CCCCeeccccchhhhhcccCCCceeECCEEECCCCCccCCCCC
Confidence 9999999999988889999889999999999999999999986
No 6
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.3e-73 Score=578.41 Aligned_cols=354 Identities=24% Similarity=0.354 Sum_probs=329.8
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHHH-HHHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTKA-LVKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~~-~~~~~~-~~~~l~g~~ 140 (427)
|||++|+++.+++|++.||.++.++++.++.++|+|+|++|++|||||.+. |.|++++.+. ...+++ +.|.|+|++
T Consensus 6 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~p~l~G~d 85 (383)
T 3i4k_A 6 LTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPGGPWWGGESVETMKALVDGYLAPVLIGRA 85 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCSSSTTTTSCCHHHHHHHHHHTTHHHHTTSB
T ss_pred CEEEEEEEEEEeccccCCeEecceEEEeeeEEEEEEEECCCCEEEEecccCCCCccCCCCHHHHHHHHHhhhhHHHcCCC
Confidence 999999999999999999999999999999999999999999999999887 5576654443 333444 789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhc-
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKL- 218 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~- 218 (427)
+.+++.+|+.|++.+.|. +++++|||+|||||+||..|+|||+||||. +++||+|++++..+++++.+++++++++
T Consensus 86 ~~~~~~~~~~l~~~~~~~--~~A~said~ALwDl~gk~~g~Pv~~LLGg~~r~~v~~~~t~~~~~~~~~~~~a~~~~~~~ 163 (383)
T 3i4k_A 86 VSELAGIMADLERVVARA--RYAKAAVDVAMHDAWARSLNVPVRDLLGGTVRDKVDVTWALGVLPLDVAVAEIEERIEEF 163 (383)
T ss_dssp GGGHHHHHHHHHHHCCSC--HHHHHHHHHHHHHHHHHHTTSBGGGGTTCCSCSEEEBCEEECSCCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCCeEEEeEEeeCCCHHHHHHHHHHHHHhc
Confidence 999999999998877654 578999999999999999999999999996 7899999999999999999999998887
Q ss_pred CCcEEEEeccC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHH
Q 014285 219 GFSTLKLNVGR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVS 296 (427)
Q Consensus 219 Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~ 296 (427)
||++||+|+|. ++++|++++++||+. ++++.|+||+|++|++++|++++++|+++++ .|||||++++|++++++|+
T Consensus 164 G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~ 241 (383)
T 3i4k_A 164 GNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGV--ELFEQPTPADDLETLREIT 241 (383)
T ss_dssp CCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTC--CEEESCSCTTCHHHHHHHH
T ss_pred CCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCC--CEEECCCChhhHHHHHHHH
Confidence 99999999997 899999999999995 7899999999999999999999999999997 4999999999999999998
Q ss_pred HhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHH
Q 014285 297 NFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375 (427)
Q Consensus 297 ~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hl 375 (427)
+ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|+++|++|+
T Consensus 242 ~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hl 317 (383)
T 3i4k_A 242 R----RTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGATSLEGPIGTAASLQF 317 (383)
T ss_dssp H----HHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCSCCCHHHHHHHHHH
T ss_pred h----hCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCCCCccHHHHHHHHHH
Confidence 6 68999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred HhhcCCcce-eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 376 AAGLGCIKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 376 aaal~~~~~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|+.+ .|+++|+.+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 318 aaa~p~~~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 369 (383)
T 3i4k_A 318 AASTKAISYGTELFGPQLLKDTYIVQEFEYKDGQVAIPQGPGLGVDVDMDKV 369 (383)
T ss_dssp HHHCTTEEEEECCCHHHHBSSCSSSSCCCEETTEEECCCSSBTSCCCCHHHH
T ss_pred HHcCCCCCccccccchhhhhhhccCCCceeeCCEEECCCCCCcceeeCHHHH
Confidence 999999988 799988777889999999999999999999999999999865
No 7
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=100.00 E-value=2.1e-74 Score=578.83 Aligned_cols=351 Identities=25% Similarity=0.369 Sum_probs=317.0
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHH-HHHHHH-HhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKA-LVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~-~~~~~~-~~~~l~g~~~~ 142 (427)
|||++++++.+++|++.||.++.++.+.++.++|+|+|++|++|||||.+.+.+++++.+. ...+++ +.|.|+|+++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~~l~~~l~G~~~~ 80 (356)
T 3ro6_B 1 MKIADIQVRTEHFPLTRPYRIAFRSIEEIDNLIVEIRTADGLLGLGAASPERHVTGETLEACHAALDHDRLGWLMGRDIR 80 (356)
T ss_dssp CBEEEEEEEEEEEEBC----------CEEEEEEEEEEETTSCEEEEEECCCHHHHCCCHHHHHHHHCGGGCTTTTTCBGG
T ss_pred CEEEEEEEEEEEecccCCEEecCeEEEeeeEEEEEEEECCCCEEEecccCCCCcCcCCHHHHHHHHHHHhHHHhcCCCcc
Confidence 8999999999999999999999999999999999999999999999999877666654433 233444 78999999999
Q ss_pred CHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcE
Q 014285 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFST 222 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~ 222 (427)
+++.+|+.|++.+.+. +++++|||+||||++||..|+|||+||||.++++|+|++++..+++++.+++++++++||++
T Consensus 81 ~~~~~~~~l~~~~~~~--~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~ 158 (356)
T 3ro6_B 81 TLPRLCRELAERLPAA--PAARAALDMALHDLVAQCLGLPLVEILGRAHDSLPTSVTIGIKPVEETLAEAREHLALGFRV 158 (356)
T ss_dssp GHHHHHHHHHHHCTTC--HHHHHHHHHHHHHHHHHHHTSBHHHHTCCCCSCEEBCEEECSCCHHHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceeeeEEEcCCCHHHHHHHHHHHHHcCCCE
Confidence 9999999998876554 67899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhcc
Q 014285 223 LKLNVGRNITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARD 301 (427)
Q Consensus 223 iKlKiG~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~ 301 (427)
||+|+|.++++|++++++||+. ++++.|+||+|++|++++|++++++|+++++ .|||||++++|++++++|++
T Consensus 159 ~K~K~G~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~---- 232 (356)
T 3ro6_B 159 LKVKLCGDEEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGI--EFIEQPFPAGRTDWLRALPK---- 232 (356)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTC--CCEECCSCTTCHHHHHTSCH----
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCC--CEEECCCCCCcHHHHHHHHh----
Confidence 9999999999999999999995 7999999999999999999999999999997 49999999999999999975
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcC-CCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhc
Q 014285 302 TYGISVVADESCRSLNDVQKVMQEN-LASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGL 379 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~-a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal 379 (427)
++++||++||++.+..+++++++.+ ++|++|+|++++| ++++++++++|+++|+++++||++||+|+++|++|+++++
T Consensus 233 ~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~i~~aa~~hlaaa~ 312 (356)
T 3ro6_B 233 AIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGIDLMWGCMDESRISIAAALHAALAC 312 (356)
T ss_dssp HHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHHHTC
T ss_pred cCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHhcC
Confidence 6889999999999999999999999 9999999999997 9999999999999999999999999999999999999999
Q ss_pred CCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCC
Q 014285 380 GCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWT 424 (427)
Q Consensus 380 ~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~ 424 (427)
+|..+.|+++++.+.+|++.+++.++||++.+|++||||| +|+|
T Consensus 313 p~~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv-~d~~ 356 (356)
T 3ro6_B 313 PATRYLDLDGSFDLARDVAEGGFILEDGRLRVTERPGLGL-VYPD 356 (356)
T ss_dssp TTEEEECCCTTTTBSCCSCEESCEEETTEEECCSSSBTCE-EC--
T ss_pred CCCCeEecccchhhhhccccCCceeECCEEECCCCCeeee-cCCC
Confidence 9999999999988888999888999999999999999999 9986
No 8
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=100.00 E-value=1.1e-73 Score=578.38 Aligned_cols=354 Identities=23% Similarity=0.337 Sum_probs=325.5
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC--CCCcchHHHH-HHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP--LVTGDQTKAL-VKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~--~~s~~~~~~~-~~~~~-~~~~l~g~~ 140 (427)
++|++|+++.+++|++.||.++.++.+.++.++|+|+|++|++||||+.+.+ .|++++.+.. ..+++ +.|.|+|++
T Consensus 6 ~~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~y~~e~~~~~~~~i~~~l~p~liG~d 85 (382)
T 3dgb_A 6 SAIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGESTTIGGLAYGNESPDSIKTNIDRFVAPLLIGQD 85 (382)
T ss_dssp TBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECSTTTTSSSCCHHHHHHHHHHTHHHHHTTSB
T ss_pred CeeeEEEEEEEeeccCCCeEecCeEEeeeeEEEEEEEECCCCEEEEecccCCCCccCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 3499999999999999999999999999999999999999999999999874 4565544433 33444 889999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhh-c
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCK-L 218 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~-~ 218 (427)
+.+++.+|+.|++.+.|+ +++++||||||||++||..|+|||+||||. +++||+|++++..+++++.++++++++ +
T Consensus 86 ~~~~~~~~~~l~~~~~g~--~~A~said~ALwDl~gk~~g~Pv~~LLGg~~r~~v~~~~t~~~~~~~~~~~~~~~~~~~~ 163 (382)
T 3dgb_A 86 ASNINAAMLRLEQSIRGN--TFAKSGIESALLDAQGKRLGLPVSELLGGRVRDALPVAWTLASGDTAKDIAEAQKMLDLR 163 (382)
T ss_dssp TTCHHHHHHHHHHHCCSC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEBCEEECSSCHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCCeeeEEEEecCCChHHHHHHHHHHHHhC
Confidence 999999999999877664 678999999999999999999999999997 789999999888899988888888777 6
Q ss_pred CCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHH
Q 014285 219 GFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVS 296 (427)
Q Consensus 219 Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~ 296 (427)
||++||+|+|. ++++|++++++||+ .++++.|+||||++|++++|++++++|+++++ .|||||++++|++++++|+
T Consensus 164 G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~ 241 (382)
T 3dgb_A 164 RHRIFKLKIGAGEVDRDLAHVIAIKKALGDSASVRVDVNQAWDEAVALRACRILGGNGI--DLIEQPISRNNRAGMVRLN 241 (382)
T ss_dssp SCSEEEEECCSSCHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHHHTTTC--CCEECCBCTTCHHHHHHHH
T ss_pred CCCEEEEeeCCCCHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHhhcCc--CeeeCCCCccCHHHHHHHH
Confidence 99999999997 57999999999999 57899999999999999999999999999997 4999999999999999998
Q ss_pred HhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHH
Q 014285 297 NFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375 (427)
Q Consensus 297 ~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hl 375 (427)
+ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|++++++|+
T Consensus 242 ~----~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~ig~aa~~hl 317 (382)
T 3dgb_A 242 A----SSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTMLEGGIGTLASAHA 317 (382)
T ss_dssp H----HCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCCHHHHHHHHHH
T ss_pred H----hCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEeecCCCccHHHHHHHHHH
Confidence 6 68999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred HhhcCCcce-eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 376 AAGLGCIKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 376 aaal~~~~~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|..+ .|+++|+.+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 318 aaa~~~~~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 369 (382)
T 3dgb_A 318 FLTLNKLSWDTELFGPLLLTEDILAEPPVYRDFHLHVSKAPGLGLSLDEERL 369 (382)
T ss_dssp HTTSSCCTTCBCCCHHHHBSCCSBSSCCEEETTEEECCCCSBTSCCBCHHHH
T ss_pred HHcCCCCcceeeccchhhhhhcccCCCceeECCEEECCCCCCcCcccCHHHH
Confidence 999999887 688888777889999999999999999999999999999875
No 9
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.3e-73 Score=577.94 Aligned_cols=354 Identities=22% Similarity=0.322 Sum_probs=312.3
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC--CCCcchHHHH-HHHHH-HhhHhcCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP--LVTGDQTKAL-VKVRE-ACQFLRQS 139 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~--~~s~~~~~~~-~~~~~-~~~~l~g~ 139 (427)
.|||++|+++.+++|++.||.++.++.+.++.++|+|+|++|++|||||.+.+ .|++++.+.. ..+++ +.|.|+|+
T Consensus 4 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td~G~~G~GE~~~~~~~~y~~e~~~~~~~~i~~~l~p~l~G~ 83 (381)
T 3fcp_A 4 TATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGICGIGEATTIGGLSYGVESPEAISSAITHYLTPLLKGQ 83 (381)
T ss_dssp CCBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEEECSTTTTSSSCCHHHHHHHHHHTHHHHHTTS
T ss_pred CcEEEEEEEEEEeccccCCeEecccEEEeeeEEEEEEEECCCCEEEeccccCCCCccCCCCHHHHHHHHHHHHHHHhcCC
Confidence 39999999999999999999999999999999999999999999999999874 4565544433 33444 88999999
Q ss_pred CCCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhh-
Q 014285 140 PPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCK- 217 (427)
Q Consensus 140 ~~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~- 217 (427)
++.+++.+|+.|++.+.|+ +++++||||||||++||..|+|||+||||. +++||+|++++..+++++.++++++++
T Consensus 84 d~~~~~~~~~~l~~~~~g~--~~A~said~ALwDl~gk~~g~Pv~~LLGg~~r~~v~~~~t~~~~~~~~~~~~~~~~~~~ 161 (381)
T 3fcp_A 84 PADNLNALTARMNGAIKGN--TFAKSAIETALLDAQGKALGLPVSALLGGALQTALPVLWTLASGDTAKDIAEGEKLLAE 161 (381)
T ss_dssp BSSCHHHHHHHHHHHCCSC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEBCEEECSSCHHHHHHHHHHHTC-
T ss_pred CcCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCceeeEEEecCCChHHHHHHHHHHHHh
Confidence 9999999999998877664 678999999999999999999999999997 789999999888899998888888777
Q ss_pred cCCcEEEEeccC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHH
Q 014285 218 LGFSTLKLNVGR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDV 295 (427)
Q Consensus 218 ~Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L 295 (427)
.||++||+|+|. ++++|++++++||+. ++++.|+||||++|++++|++++++|+++++ .|||||++++|++++++|
T Consensus 162 ~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i--~~iEeP~~~~d~~~~~~l 239 (381)
T 3fcp_A 162 GRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQAWDAATGAKGCRELAAMGV--DLIEQPVSAHDNAALVRL 239 (381)
T ss_dssp ---CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTTCBCHHHHHHHHHHHHHTTC--SEEECCBCTTCHHHHHHH
T ss_pred CCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHhhcCc--cceeCCCCcccHHHHHHH
Confidence 699999999997 579999999999995 7899999999999999999999999999997 499999999999999999
Q ss_pred HHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHH
Q 014285 296 SNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALH 374 (427)
Q Consensus 296 ~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~h 374 (427)
++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++||++||+|++++++|
T Consensus 240 ~~----~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~h 315 (381)
T 3fcp_A 240 SQ----QIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTMLEGTVGTVASLH 315 (381)
T ss_dssp HH----HSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSCCCHHHHHHHHH
T ss_pred HH----hCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCCccHHHHHHHHH
Confidence 86 68999999999999999999999999999999999997 99999999999999999999999999999999999
Q ss_pred HHhhcCCcce-eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 375 LAAGLGCIKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 375 laaal~~~~~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++++ ..+ .|+++|+.+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 316 laaa~~-~~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 367 (381)
T 3fcp_A 316 AWSTLP-LQWGTEMFGPLLLKDDIVSVPLTFADGQVALPQTPGLGVELDEDKL 367 (381)
T ss_dssp HHTTSC-CTTCBCCCGGGGBSCCSBSSCCCEETTEEECCCSSBTSCCBCHHHH
T ss_pred HHHhCC-CccccccccchhhhhhccCCCceeeCCEEECCCCCCcCcccCHHHH
Confidence 999999 766 588888778889999999999999999999999999999875
No 10
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=100.00 E-value=8.2e-74 Score=578.76 Aligned_cols=356 Identities=20% Similarity=0.303 Sum_probs=316.3
Q ss_pred cceeeEEEEEEEEEEeeccccccccceeEEeee-EEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHH-HhhHhcC
Q 014285 62 TFWVDVQRAEGRELNVALSAPLSLGLSSVENVE-NVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVRE-ACQFLRQ 138 (427)
Q Consensus 62 ~~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~-~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~-~~~~l~g 138 (427)
++.|||++|+++.+++|++.||.++.++.+.++ .++|+|+|++|++|||||.+.+.++ ++.+ ....+++ +.|.|+|
T Consensus 3 ~~~~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~-e~~~~~~~~i~~~l~p~liG 81 (377)
T 3my9_A 3 SWDSVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFT-GTPEAAFSALDIYLRPLILG 81 (377)
T ss_dssp CCCCBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCEEEEEECCC------CHHHHHHHHHTTTHHHHTT
T ss_pred cccCEEEEEEEEEEeccccCCeeccceEEEeeeeEEEEEEEECCCCEEEEecccCCCcC-CCHHHHHHHHHHHHHHHhCC
Confidence 466999999999999999999999999999888 9999999999999999999887654 3333 3334555 7899999
Q ss_pred CCCCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhh
Q 014285 139 SPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCK 217 (427)
Q Consensus 139 ~~~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~ 217 (427)
+++.+++.+|+.|++.+.++ +++++||||||||++||..|+|||+||||. ++++|+|++++..+++++.++++++++
T Consensus 82 ~d~~~~~~~~~~l~~~~~~~--~~A~said~AlwDl~gk~~g~Pl~~LLGg~~r~~v~~~~t~~~~~~~~~~~~a~~~~~ 159 (377)
T 3my9_A 82 APIKRVRELMARMDKMLVGH--GEAKAAVEMALLDILGKATGLSVADLLGGRVRDRIPLSFSIADPDFDADLERMRAMVP 159 (377)
T ss_dssp CBTTCHHHHHHHHHHHSCSC--HHHHHHHHHHHHHHHHHHHTCBTTGGGTCCSCSEEEBCEEECCSSHHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCeEEEEEecCCCCHHHHHHHHHHHHH
Confidence 99999999999998877654 578999999999999999999999999996 789999999988899999999999999
Q ss_pred cCCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHH
Q 014285 218 LGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDV 295 (427)
Q Consensus 218 ~Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L 295 (427)
+||++||+|+|. ++++|++++++||+ .++++.|+||+|++|++++|++++++|+++++ .|||||++++|++++++|
T Consensus 160 ~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l 237 (377)
T 3my9_A 160 AGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRP--TFIEQPVPRRHLDAMAGF 237 (377)
T ss_dssp TTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCC--SCEECCSCTTCHHHHHHH
T ss_pred cCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCC--CEEECCCCccCHHHHHHH
Confidence 999999999997 67999999999999 57999999999999999999999999999997 499999999999999999
Q ss_pred HHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHH
Q 014285 296 SNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALH 374 (427)
Q Consensus 296 ~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~h 374 (427)
++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+||+++++|
T Consensus 238 ~~----~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~~~~~~~~es~i~~aa~~h 313 (377)
T 3my9_A 238 AA----ALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGTLWEGGIALAAGTQ 313 (377)
T ss_dssp HH----HCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCEECCSHHHHHHHHH
T ss_pred HH----hCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEecCCCCCcHHHHHHHHH
Confidence 86 68999999999999999999999999999999999997 99999999999999999999999999999999999
Q ss_pred HHhhcCCcce-eccCCC-cccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 375 LAAGLGCIKY-VNLNTP-FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 375 laaal~~~~~-~e~~~p-~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++++|..+ .|++.+ ..+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 314 laaa~~~~~~~~e~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 367 (377)
T 3my9_A 314 LIAATPGISLGCEFYMPHHVLTEDVLEERIANSAGHVIVPDGPGLGISISEASL 367 (377)
T ss_dssp HHHTCTTBCSCBEESCTTSEECCCSSSSCCCEETTEEECCCSSBTSCCCCHHHH
T ss_pred HHHhCCCCccceeecCchhhhhhhccCCCceeECCEEECCCCCCCCcccCHHHH
Confidence 9999999887 688877 567788988899999999999999999999999865
No 11
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=100.00 E-value=2e-73 Score=577.19 Aligned_cols=353 Identities=20% Similarity=0.275 Sum_probs=314.4
Q ss_pred eeEEEEEEEEEEeeccccccccceeE-EeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHH-HhhHhcCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSV-ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVRE-ACQFLRQSPP 141 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~-~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~-~~~~l~g~~~ 141 (427)
|||++|+++.+++|++.||.++.+++ +.++.++|+|+|++|++|||||.+.+.++ ++.+ ....+++ +.|.|+|+++
T Consensus 8 mkI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~-e~~~~~~~~i~~~l~p~l~G~d~ 86 (385)
T 3i6e_A 8 QKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAEGFGEASPWAVFT-GTPEASYAALDRYLRPLVIGRRV 86 (385)
T ss_dssp SBEEEEEEEEEECCC--------------CEEEEEEEEETTSCEEEEEECCCTTTT-CCHHHHHHHHHHTTHHHHTTCBG
T ss_pred cEEEEEEEEEEecccCCCeeccCcEEeceeeEEEEEEEECCCCEEEEeeccCCCcC-CCHHHHHHHHHHHHHHHHCCCCc
Confidence 89999999999999999999999999 88899999999999999999999887665 3333 3334566 8899999999
Q ss_pred CCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcCC
Q 014285 142 TTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLGF 220 (427)
Q Consensus 142 ~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf 220 (427)
.+++.+|+.|++.+.+. +++++|||+||||++||..|+|||+||||. ++++|+|++++..+++++.+++++++++||
T Consensus 87 ~~~~~~~~~l~~~~~~~--~~A~said~ALwDl~gk~~g~Pl~~LLGg~~r~~v~~~~t~~~~~~~~~~~~a~~~~~~G~ 164 (385)
T 3i6e_A 87 GDRVAIMDEAARAVAHC--TEAKAALDSALLDLAGRISNLPVWALLGGKCRDTIPLSCSIANPDFDADIALMERLRADGV 164 (385)
T ss_dssp GGHHHHHHHHHHHSSSC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEBEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHcCCcHHHHhCcccCCceEEEEEcCCCCHHHHHHHHHHHHHcCC
Confidence 99999999998876654 678999999999999999999999999997 789999999988899999999999999999
Q ss_pred cEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 221 STLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 221 ~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
++||+|+|. ++++|++++++||+..|++.|+||+|++|++++|++++++|+++++ .|||||++++|++++++|++
T Consensus 165 ~~~K~Kvg~~~~~~d~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i--~~iEqP~~~~d~~~~~~l~~-- 240 (385)
T 3i6e_A 165 GLIKLKTGFRDHAFDIMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQP--DFIEQPVRAHHFELMARLRG-- 240 (385)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCC--SCEECCSCTTCHHHHHHHHT--
T ss_pred CEEEEecCCCCHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC--CEEECCCCcccHHHHHHHHH--
Confidence 999999997 6899999999999955999999999999999999999999999997 49999999999999999985
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+||+++++|++++
T Consensus 241 --~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~hlaaa 318 (385)
T 3i6e_A 241 --LTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEAGLAHLAGTHMIAA 318 (385)
T ss_dssp --TCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHHHHHHT
T ss_pred --hCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEEEeCCCCccHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999997 999999999999999999999999999999999999999
Q ss_pred cCCcce-eccCCC-cccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 379 LGCIKY-VNLNTP-FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 379 l~~~~~-~e~~~p-~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++|..+ .|++.+ ..+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 319 ~~~~~~~~e~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 368 (385)
T 3i6e_A 319 TPEITLGCEFYQASYFLNEDILETPFRVEAGQVIVPDGPGLGARADPEKL 368 (385)
T ss_dssp CTTEEEEECCCHHHHTCSSCSBSSCCCEETTEEECCCSSBTSSCBCHHHH
T ss_pred CCCCccchhhcCchhhhhhhcccCCceeECCEEECCCCCCCCceECHHHH
Confidence 999887 688776 566788888899999999999999999999999865
No 12
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=100.00 E-value=5.3e-73 Score=570.92 Aligned_cols=353 Identities=19% Similarity=0.314 Sum_probs=314.8
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHH-HHhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVR-EACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~-~~~~~l~g~~~~ 142 (427)
|||++|+++++++|++.||.++.++++.++.++|+|+|++|++|||||.+.|.+++++.+ ....++ .+.|.|+|+++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~i~~~l~~~l~G~d~~ 80 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIVGVAEAPPRPFTYGETQTGIVAVIEQYFAPALIGLTLT 80 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEECCCTTTTCCCHHHHHHHHHHTHHHHHTTCBTT
T ss_pred CEEEEEEEEEEEeeccCCeeccCeEEeeeeEEEEEEEECCCCEEEEeccCCCCccCCCHHHHHHHHHHHHHHHHcCCCcC
Confidence 899999999999999999999999999999999999999999999999988877665433 334455 488999999999
Q ss_pred CHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhc-CCc
Q 014285 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKL-GFS 221 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~-Gf~ 221 (427)
+++.+|+.|++. .++ +++++||||||||++||..|+|||+||||.++++|+|++++..+++++.+++++++++ ||+
T Consensus 81 ~~~~~~~~l~~~-~~~--~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~v~~~~~~~~~~~~~~~~~a~~~~~~~G~~ 157 (367)
T 3dg3_A 81 EREVAHTRMART-VGN--PTAKAAIDMAMWDALGQSLRLSVSEMLGGYTDRMRVSHMLGFDDPVKMVAEAERIRETYGIN 157 (367)
T ss_dssp CHHHHHHHHTTS-CSC--HHHHHHHHHHHHHHHHHHHTCBHHHHHTCCCSEEEEEEEEESSCHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHhc-cCc--hHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCeEEEEEEecCCCHHHHHHHHHHHHHhcCcc
Confidence 999999999764 333 6789999999999999999999999999988999999999999999999999999999 999
Q ss_pred EEEEeccCCch-hhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 222 TLKLNVGRNIT-ADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 222 ~iKlKiG~~~~-~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
+||+|+|.+.. +|++++++||+ .+|++.|+||+|++|++++|+++++.|+++++ .|||||++++|++++++|++
T Consensus 158 ~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~-- 233 (367)
T 3dg3_A 158 TFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDL--LFAEELCPADDVLSRRRLVG-- 233 (367)
T ss_dssp EEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCC--SCEESCSCTTSHHHHHHHHH--
T ss_pred EEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCC--CEEECCCCcccHHHHHHHHH--
Confidence 99999998777 99999999999 57999999999999999999999999999997 49999999999999999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhc
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGL 379 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal 379 (427)
++++||++||++.+..+++++++.+++|++|+|++++|++++++++++|+++|+++++|+++||+||+++++|+++++
T Consensus 234 --~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~Git~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hlaaa~ 311 (367)
T 3dg3_A 234 --QLDMPFIADESVPTPADVTREVLGGSATAISIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDGQIGTACTVSFGTAF 311 (367)
T ss_dssp --HCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHHTTHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHHHHHTTC
T ss_pred --hCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhhhHHHHHHHHHHHHHcCCeEEECCcCCcHHHHHHHHHHHHhC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-cce-eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 380 GC-IKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 380 ~~-~~~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+| ..+ .+++.++.+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 312 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 360 (367)
T 3dg3_A 312 ERTSRHAGELSNFLDMSDDLLTVPLQISDGQLHRRPGPGLGIEIDPDKL 360 (367)
T ss_dssp HHHHTSCEECCGGGGBSCCSBSSCCCCBTTEEECCSSSBTSCCBCHHHH
T ss_pred CcccCcchhccchhhhhhcccCCCceeeCCEEECCCCCcCCceECHHHH
Confidence 74 233 478888788889999999999999999999999999999865
No 13
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=100.00 E-value=4.8e-72 Score=567.08 Aligned_cols=351 Identities=17% Similarity=0.274 Sum_probs=321.5
Q ss_pred eeEEEEEEEEEEeecccc-ccccce-eEEeeeEEEEEEEEcCCceEEEEeecC-CCCCcchH-HHHHHHHHHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAP-LSLGLS-SVENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQT-KALVKVREACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p-~~~a~~-~~~~~~~vlV~v~t~~G~~G~GE~~~~-~~~s~~~~-~~~~~~~~~~~~l~g~~ 140 (427)
|||++|+++.+++|++.| |.++.+ +.+.++.++|+|+|++|++|||||.+. +.|+++.. .....++.+.|.|+|++
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~~s~g~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~e~~~~~~~~l~~l~~~l~G~d 82 (386)
T 3fv9_G 3 LKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLTGWGESTPFGSTYIAAHAGGTRAALELLAPAILGMD 82 (386)
T ss_dssp CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSCEEEEEECCSTTSSSSCCHHHHHHHHHHHHHHHTTSC
T ss_pred CEEEEEEEEEEEeecCCCceEecCceEEeeeeEEEEEEEECCCCEEEEecccCCCccCcccHHHHHHHHHHHHHHhCCCC
Confidence 899999999999999999 999954 888999999999999999999999987 56665433 33344567999999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+|+.|++.+.|. +++++|||+|||||+||..|+|||+||||. ++++|+|++++..+++++.+++++++++|
T Consensus 83 ~~~~~~~~~~l~~~~~g~--~~A~said~ALwDl~gk~~g~Pv~~LLGg~~~~~v~~y~s~~~~~~e~~~~~a~~~~~~G 160 (386)
T 3fv9_G 83 PRQHDRIWDRMRDTLKGH--RDARAALDIACWDIAAQAAGLPLCDMTGGRVAGPVPVISSIGGDTPEAMRAKVARHRAQG 160 (386)
T ss_dssp TTCHHHHHHHHHHHCSSC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCSSCBCEEEEECSCCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCCceeeeEecCCCCHHHHHHHHHHHHHCC
Confidence 999999999998877664 679999999999999999999999999997 68999999999999999999999999999
Q ss_pred CcEEEEecc-----CCchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHh-hhCCCCCceEeCCCCCCChhhH
Q 014285 220 FSTLKLNVG-----RNITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKL-NDMGVIPVLFEQPVHRDDWSGL 292 (427)
Q Consensus 220 f~~iKlKiG-----~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L-~~~~l~~~~iEqP~~~~d~~~~ 292 (427)
|++||+|+| .++++|++++++||+. ++++.|+||||++|++++|++++++| ++++ + |||||++ |++++
T Consensus 161 ~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~--i-~iEeP~~--~~~~~ 235 (386)
T 3fv9_G 161 FKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNGLTVEHALRMLSLLPPGLD--I-VLEAPCA--SWAET 235 (386)
T ss_dssp CCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTCCCHHHHHHHHHHSCSSCC--C-EEECCCS--SHHHH
T ss_pred CCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHhhccCC--c-EEecCCC--CHHHH
Confidence 999999999 5689999999999995 79999999999999999999999999 7776 4 9999998 89999
Q ss_pred HHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHH
Q 014285 293 HDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGF 371 (427)
Q Consensus 293 ~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a 371 (427)
++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|++++
T Consensus 236 ~~l~~----~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~i~~aa 311 (386)
T 3fv9_G 236 KSLRA----RCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGSQISFAA 311 (386)
T ss_dssp HHHHT----TCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH
T ss_pred HHHHh----hCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEeCCCCCCHHHHHH
Confidence 99985 78999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred HHHHHhhcCCccee-ccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 372 ALHLAAGLGCIKYV-NLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 372 ~~hlaaal~~~~~~-e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++|++++++|..+. +++++.++.++++.+++.++||++.+|++|||||++|+++|
T Consensus 312 ~~hlaaa~~~~~~~~~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 367 (386)
T 3fv9_G 312 ILHLAQSTPRHLLRCALDTRAMTTAELAEIDAPLRDGGASAPSDPGLGLRVNRDAL 367 (386)
T ss_dssp HHHHHHTSCTTTEEEEECGGGTBCCCCEECCCCSBTTBBCCCCSSBTCCEECGGGG
T ss_pred HHHHHHhCCCcccccccccccchhccccCCCceEECCEEECCCCCCCCceeCHHHH
Confidence 99999999996443 67777667778888888999999999999999999999987
No 14
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=100.00 E-value=2.5e-72 Score=563.36 Aligned_cols=344 Identities=29% Similarity=0.443 Sum_probs=322.5
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHHHh---hHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVREAC---QFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~~~---~~l~g~~ 140 (427)
|||++++++.+++|++.||.++.++.+.++.++|+|+|++|++|||||.+.+.+++++.+ ....++.+. |.|+|++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~ge~~~~~~~~i~~l~~~~p~l~G~d 80 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPGIFITGETLAGTLETIELFGQAIIGLNPFN 80 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCTTTTCCCHHHHHHHHHHHHTTSTTCCTTC
T ss_pred CEEEEEEEEEEEEeccCCEEecCcEEeeceEEEEEEEECCCCEEEEeecCCCCcCCCCHHHHHHHHHHHhhcCccccCCC
Confidence 899999999999999999999999999999999999999999999999988877665433 333445677 9999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGF 220 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf 220 (427)
+.+++.+|+.|+ .+ .+++++||||||||++||..|+|||+||||.++++|+|+++++.+++++.+++++++++||
T Consensus 81 ~~~~~~~~~~l~---~~--~~~A~~aid~AlwDl~gk~~g~Pl~~llGg~~~~v~~~~~~~~~~~~~~~~~a~~~~~~G~ 155 (354)
T 3jva_A 81 IEKIHEVMDKIS---AF--APAAKAAIDIACYDLMGQKAQLPLYQLLGGYDNQVITDITLGIDEPNVMAQKAVEKVKLGF 155 (354)
T ss_dssp HHHHHHHHHHHC---SS--CHHHHHHHHHHHHHHHHHHHTSBHHHHTTCSCSEEECCEEECSCCHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHh---cc--cHHHHHHHHHHHHHHHHHHcCCcHHHHhhccCCeeeeeEEeCCCCHHHHHHHHHHHHHhCC
Confidence 999999999886 23 3679999999999999999999999999998899999999999999999999999999999
Q ss_pred cEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 221 STLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 221 ~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
++||+|+|.+.++|++++++||+ .++++.|+||+|++|++++|++++++|+++++ .|||||++++|++++++|++
T Consensus 156 ~~~K~K~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i--~~iEqP~~~~d~~~~~~l~~-- 231 (354)
T 3jva_A 156 DTLKIKVGTGIEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQI--ELVEQPVKRRDLEGLKYVTS-- 231 (354)
T ss_dssp SEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCE--EEEECCSCTTCHHHHHHHHH--
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC--CEEECCCChhhHHHHHHHHH--
Confidence 99999999988999999999999 58999999999999999999999999999987 59999999999999999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAA 377 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaa 377 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++ ||+++++|++|+++
T Consensus 232 --~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~~es~i~~~a~~hlaa 309 (354)
T 3jva_A 232 --QVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETTIGITAAAHLAA 309 (354)
T ss_dssp --HCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred --hCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecCCCcccHHHHHHHHHHHh
Confidence 68999999999999999999999999999999999997 999999999999999999999999 99999999999999
Q ss_pred hcCCcceeccCCCcccccCCCCCceeeeCcEEecCCC-CCccc
Q 014285 378 GLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNA-RGQGG 419 (427)
Q Consensus 378 al~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~-pGlGv 419 (427)
+++|+.++|+++|+.+.+|++.+++.++||++.+|++ |||||
T Consensus 310 a~~~~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~~PGlGv 352 (354)
T 3jva_A 310 AQKNITRADLDATFGLETAPVTGGVSLEAKPLLELGEAAGLGI 352 (354)
T ss_dssp HCTTEEEECCCGGGGBSSCSSSBSSCSSCCSEEECCSSSBTCB
T ss_pred cCCCCCcccccchhhhhhccccCCceEECCEEEcCCCCCCCCC
Confidence 9999999999999888889999899999999999999 99998
No 15
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=100.00 E-value=9.5e-72 Score=565.34 Aligned_cols=351 Identities=15% Similarity=0.251 Sum_probs=304.0
Q ss_pred eeEEEEEEEEEEeec-cccccccceeEEeeeEEEEEEEEcCCceEEEEeecC-CCCCcchH-HHHHHHHHHhhHhcCCCC
Q 014285 65 VDVQRAEGRELNVAL-SAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQT-KALVKVREACQFLRQSPP 141 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl-~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~-~~~s~~~~-~~~~~~~~~~~~l~g~~~ 141 (427)
|||++|+++.+++|+ +.||.++.++.+.++.++|+|+|++|++|||||.+. |.|+.+.. .....+++++|.|+|+++
T Consensus 23 MkI~~i~~~~~~~pl~~~p~~~s~g~~~~~~~~~V~i~td~G~~G~GE~~~~~~~~~~~~~~~~~~~l~~l~p~l~G~d~ 102 (391)
T 4e8g_A 23 MKIAEIHVYAHDLPVKDGPYTIASSTVWSLQTTLVKIVADSGLAGWGETCPVGPTYAPSHALGARAALAEMAPGLIGANP 102 (391)
T ss_dssp CCEEEEEEEEEEC---------------CCEEEEEEEEETTSCEEEEEECCSSTTTSSCCHHHHHHHHHHHGGGGTTCCT
T ss_pred CEEEEEEEEEEeeeCCCCCcccccceeeeeeEEEEEEEECCCCEEEecCcCCCCccCCccHHHHHHHHHHHHHHHCCCCc
Confidence 999999999999999 999999999999999999999999999999999987 66765433 334456679999999999
Q ss_pred CCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcCC
Q 014285 142 TTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLGF 220 (427)
Q Consensus 142 ~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf 220 (427)
.+++.+|+.|++.+.|+ +++++|||||||||+||..|+|||+||||. ++++|+|++++..+++++.+++++++++||
T Consensus 103 ~~~~~~~~~l~~~~~g~--~~A~said~ALwDl~gK~~g~Pl~~LLGg~~r~~v~~y~s~~~~~~e~~~~~a~~~~~~G~ 180 (391)
T 4e8g_A 103 LQPLVLRRRMDGLLCGH--NYAKAAIDIAAYDLMGKHYGVRVADLLGGVAAERVPSYYATGIGQPDEIARIAAEKVAEGF 180 (391)
T ss_dssp TCHHHHHHHHHTTCSSC--HHHHHHHHHHHHHHHHHHHTCBGGGGTTCCSCSEEECCEEECSCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHcCChHHHhcCCCCCCcEEEeEEcCCCCHHHHHHHHHHHHHcCC
Confidence 99999999998766554 578999999999999999999999999997 689999999999999999999999999999
Q ss_pred cEEEEeccC-CchhhHHHHHHHHH-hC-CCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHH
Q 014285 221 STLKLNVGR-NITADFDVLQAIHA-VH-PHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSN 297 (427)
Q Consensus 221 ~~iKlKiG~-~~~~d~~~l~~ir~-~~-~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~ 297 (427)
++||+|+|. ++++|++++++||+ .+ |++.|+||||++|++++|++++++|++++ + |||||+ +|++++++|++
T Consensus 181 ~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN~~w~~~~A~~~~~~L~~~~--i-~iEeP~--~~~~~~~~l~~ 255 (391)
T 4e8g_A 181 PRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNRSLPSRDALRLSRECPEIP--F-VLEQPC--NTLEEIAAIRG 255 (391)
T ss_dssp SEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECTTCCCHHHHHHHHHHCTTSC--E-EEESCS--SSHHHHHHHGG
T ss_pred cEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCCHHHHHHHHHHHhhcC--e-EEecCC--ccHHHHHHHHh
Confidence 999999997 89999999999998 57 99999999999999999999999999987 4 999996 48999999985
Q ss_pred hhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHH
Q 014285 298 FARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLA 376 (427)
Q Consensus 298 ~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hla 376 (427)
++++|||+||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++||++||+|+++|++|++
T Consensus 256 ----~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hla 331 (391)
T 4e8g_A 256 ----RVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPHSCDDAWGGDIIAAACTHIG 331 (391)
T ss_dssp ----GCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCEEEECSSCSHHHHHHHHHHH
T ss_pred ----hCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEeCCcCCCHHHHHHHHHHH
Confidence 78999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred hhcCCcceecc-CCCcccccCCCCCc-eeeeCcEEecCCCCCcccccCCCcC
Q 014285 377 AGLGCIKYVNL-NTPFLLSEDPFVGG-CEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 377 aal~~~~~~e~-~~p~~~~~~~~~~~-~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++|..+.+. +..-++..+....+ +.++||++.+|++||||||+|+++|
T Consensus 332 aa~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~i~vp~~PGLGve~d~~~l 383 (391)
T 4e8g_A 332 ATVQPRLNEGVWVAQPYIAQPYDEENGIRIAGGHIDLPKGPGLGITPDESLF 383 (391)
T ss_dssp TTSCGGGEEECCCSGGGCSSCSCTTTCCCEETTEEECCCSSBTSCCCCGGGT
T ss_pred HhCCCccccccccchhhhhhhccccCCceEECCEEECCCCCcCCCccCHHHH
Confidence 99999766542 22222334444444 6789999999999999999999987
No 16
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=100.00 E-value=9.8e-72 Score=563.47 Aligned_cols=352 Identities=21% Similarity=0.319 Sum_probs=320.4
Q ss_pred eeEEEEEEEEEEeeccccccccce--eEEeeeEEEEEEEEcCCceEEEEeecC-CCCCcchHH-HHHHHHHHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLS--SVENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQTK-ALVKVREACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~--~~~~~~~vlV~v~t~~G~~G~GE~~~~-~~~s~~~~~-~~~~~~~~~~~l~g~~ 140 (427)
|||++|+++.+++|++.||.++.+ +.+.++.++|+|+|++|++|||||.+. +.|+++..+ ....++.+.|.|+|++
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~l~~l~p~l~G~d 82 (378)
T 3eez_A 3 LKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGITGWGEGTPWGHTYVPAHGPGIRAGIETMAPFVLGLD 82 (378)
T ss_dssp CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCCCEEEEECCSCSSSSSCCHHHHHHHHHHHHHHHTTSC
T ss_pred cEEEEEEEEEEeccCCCceeecCCcceeeeeeEEEEEEEECCCCEEEecccCCCCccCCCcHHHHHHHHHHHHHHhcCCC
Confidence 899999999999999999999987 578899999999999999999999987 666654333 3344567899999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+|+.|++.+.|. +++++|||+|||||+||..|+|||+||||. ++++|+|.+++..+++++.+.+++++++|
T Consensus 83 ~~~~~~~~~~l~~~~~g~--~~A~said~ALwDl~gk~~g~Pl~~LlGg~~r~~v~~~~~~~~~~~e~~~~~a~~~~~~G 160 (378)
T 3eez_A 83 PRRLLDVERAMDIALPGH--LYAKSPIDMACWDIAGQAAGLPIADLMGGGSRTPRPIASSVGAKSVEETRAVIDRYRQRG 160 (378)
T ss_dssp TTCHHHHHHHHHHHSSSC--HHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCCSCEEBBCCBCSCCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHhCCcHHHHhCCCCCCeEEEEEEecCCCHHHHHHHHHHHHhCC
Confidence 999999999998877664 578999999999999999999999999997 68999999999999999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHh
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNF 298 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~ 298 (427)
|++||+|+|.++++|++++++||+. ++++.|+||+|++|++++|+++++.|+++++ |||||++ |++++++|++
T Consensus 161 ~~~iKiK~G~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i---~iEqP~~--~~~~~~~l~~- 234 (378)
T 3eez_A 161 YVAHSVKIGGDVERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV---MFEQPGE--TLDDIAAIRP- 234 (378)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC---CEECCSS--SHHHHHHTGG-
T ss_pred CCEEEeccCCCHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe---EEecCCC--CHHHHHHHHh-
Confidence 9999999999999999999999995 7899999999999999999999999999974 9999998 8999999975
Q ss_pred hccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHh
Q 014285 299 ARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377 (427)
Q Consensus 299 ~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaa 377 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|++++++|+++
T Consensus 235 ---~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~~~es~i~~aa~~hlaa 311 (378)
T 3eez_A 235 ---LHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMATGGSVLADAEALHLAA 311 (378)
T ss_dssp ---GCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSSCSHHHHHHHHHHHH
T ss_pred ---hCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999997 99999999999999999999999999999999999999
Q ss_pred hcCCcce-eccCCCcccccCCCCC-ceeeeCcEEecCCCCCcccccCCCcCC
Q 014285 378 GLGCIKY-VNLNTPFLLSEDPFVG-GCEVSGAIYNFTNARGQGGFLKWTIVS 427 (427)
Q Consensus 378 al~~~~~-~e~~~p~~~~~~~~~~-~~~~~~G~i~~p~~pGlGve~d~~~v~ 427 (427)
+++|..+ .+++++.++.++++.+ ++.++||++.+|++||||||+|+++|.
T Consensus 312 a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l~ 363 (378)
T 3eez_A 312 TIPDHACHAVWACQDMLTVDIAGGRGPRNIDGHLHLPETPGLGVHPDEDALG 363 (378)
T ss_dssp TSCGGGBCCBCCSGGGBSCCTTTTCSSCCBTTEECCCCSSBTSCCCCTTSSC
T ss_pred hCCCccceeeccccchhhhhcccCCCCeeECCEEECCCCCCCCcccCHHHHh
Confidence 9998544 4778877778888877 788999999999999999999999873
No 17
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.2e-72 Score=567.22 Aligned_cols=353 Identities=23% Similarity=0.357 Sum_probs=320.1
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHHHHH-HHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTKALV-KVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~~~~-~~~~-~~~~l~g~~ 140 (427)
|||++|+++.+++||++||.++.++.+.++.++|+|+| ||++|||||.+. |.++++..+... .+++ +.|.|+|++
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~t-dG~~G~GE~~~~~~p~~~~e~~~~~~~~i~~~l~p~liG~d 79 (370)
T 2chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYS-EGLVGVGEGGSVGGPVWSAECAETIKIIVERYLAPHLLGTD 79 (370)
T ss_dssp CCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEB-TTBCCEEECCCSTTTTTSSCCHHHHHHHHHHHTHHHHTTSC
T ss_pred CEEEEEEEEEEEcccCCceEccceEEEEEEEEEEEEEE-CCcEEEEEecCCCCCccCcccHHHHHHHHHHHHHHHhcCCC
Confidence 89999999999999999999999999999999999998 599999999876 456665544433 3343 789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCH-HHHHHHHHHHhhc
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSP-AEASELASKYCKL 218 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~-~~~~~~~~~~~~~ 218 (427)
+.+++.+|+.|.+...++ +++++||||||||++||..|+|||+||||. ++.+++|.++...+. +.+.+.++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~--~~A~said~AlwDl~gK~~g~Pl~~lLGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (370)
T 2chr_A 80 AFNVSGALQTMARAVTGN--ASAKAAVEMALLDLKARALGVSIAELLGGPLRSAIPIAWTLASGDTKRDLDSAVEMIERR 157 (370)
T ss_dssp TTCHHHHHHHHHTTCSSC--HHHHHHHHHHHHHHHHHHTTCCHHHHTTCCSCSEEEBEEEECSSCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHhhccccc--HHHHHHHHHHHHHHHHHhcCCccccccCCccccccceeeeeccCchhhhHHHHHHHHhhc
Confidence 999999999998766554 578999999999999999999999999998 577888888776554 4556777778889
Q ss_pred CCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHH
Q 014285 219 GFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVS 296 (427)
Q Consensus 219 Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~ 296 (427)
||+++|+|+|. ++++|+++++++|+ +++++.||||||++|++++|+++++.|+++++ .|||||++++|+++|++|+
T Consensus 158 g~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~--~~iEeP~~~~d~~~~~~l~ 235 (370)
T 2chr_A 158 RHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGV--ELIEQPVGRENTQALRRLS 235 (370)
T ss_dssp SCCEEEEECSSSCHHHHHHHHHHHHHHTTTTSEEEEECTTCCCTHHHHHHHHHHHTTTC--CEEECCSCSSCHHHHHHHH
T ss_pred ccceeecccccCChHHHHHHHHHHHHhcCCCcEEEecCCCCCCHHHHHHHHHHHHhcCC--ceecCCCChhhhhhhhHHh
Confidence 99999999996 78999999999999 58999999999999999999999999999997 4999999999999999998
Q ss_pred HhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHH
Q 014285 297 NFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375 (427)
Q Consensus 297 ~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hl 375 (427)
+ ++++|||+||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++++|+|++++++|+
T Consensus 236 ~----~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~~~~i~~aa~~hl 311 (370)
T 2chr_A 236 D----NNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTSVALQL 311 (370)
T ss_dssp H----HCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCSCCHHHHHHHHHH
T ss_pred h----hccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCcccHHHHHHHHHH
Confidence 6 68999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred HhhcCCccee-ccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 376 AAGLGCIKYV-NLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 376 aaal~~~~~~-e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|..+. +++.|+.+.++++.+++.++||++.+|++||||||+|+|+|
T Consensus 312 aa~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 363 (370)
T 2chr_A 312 YSTVPSLPFGCELIGPFVLADTLSHEPLEIRDYELQVPTGVGHGMTLDEDKV 363 (370)
T ss_dssp HTTSSCCTTCBCCCHHHHBSCCSBSCCCCBCSSEEECCCSSSTTCCBCHHHH
T ss_pred HHhCCCCCcccccCchhhhhhhccCCCceEECCEEECCCCCCCCceECHHHH
Confidence 9999998765 67777777888888999999999999999999999999875
No 18
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=100.00 E-value=3e-72 Score=566.05 Aligned_cols=353 Identities=24% Similarity=0.356 Sum_probs=323.3
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC--CCCcchHHHH-HHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP--LVTGDQTKAL-VKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~--~~s~~~~~~~-~~~~~-~~~~l~g~~ 140 (427)
|||++|+++.+++|++.||.++.++.+.++.++|+|+ ++|++|||||.+.+ .|++++.+.. ..+++ +.|.|+|++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~p~l~G~d 79 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVY-SEGLVGVGEGGSVGGPVWSAECAETIKIIVERYLAPHLLGTD 79 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBC-SSSCBCCEECCCBTTBTTSSCCHHHHHHHHHHHTHHHHTTSC
T ss_pred CEEEEEEEEEEEccCCCCeEccceEEeeeeEEEEEEE-ECCcEEEEccccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCC
Confidence 7999999999999999999999999999999999999 99999999998764 4665544433 33444 789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhh-c
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCK-L 218 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~-~ 218 (427)
+.+++.+|+.|++.+.|+ +++++||||||||++||..|+|||+||||. +++||+|++++..+++++.++++++++ +
T Consensus 80 ~~~~~~~~~~l~~~~~g~--~~A~said~ALwDl~gK~~g~Pl~~LLGg~~r~~v~~~~t~~~~~~~~~~~~~~~~~~~~ 157 (370)
T 1chr_A 80 AFNVSGALQTMARAVTGN--ASAKAAVEMALLDLKARALGVSIAELLGGPLRSAIPIAWTLASGDTKRDLDSAVEMIERR 157 (370)
T ss_dssp TTCHHHHHHHHHHHCSSC--HHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEBEEEECSSSHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCCceeEEEEecCCCcHHHHHHHHHHHHHC
Confidence 999999999998877664 578999999999999999999999999997 789999999888888877666666666 8
Q ss_pred CCcEEEEeccC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHH
Q 014285 219 GFSTLKLNVGR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVS 296 (427)
Q Consensus 219 Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~ 296 (427)
||++||+|+|. ++++|++++++||+. ++++.|+||+|++|++++|++++++|+++++ .|||||++++|++++++|+
T Consensus 158 G~~~~KiKvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~~~~~~~~l~ 235 (370)
T 1chr_A 158 RHNRFKVKLGFRSPQDDLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGV--ELIEQPVGRENTQALRRLS 235 (370)
T ss_dssp CCCEEEEECSSSCSHHHHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTE--EEEECCSCTTCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCC--CEEECCCCcccHHHHHHHH
Confidence 99999999997 789999999999995 6789999999999999999999999999987 5999999999999999998
Q ss_pred HhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHH
Q 014285 297 NFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375 (427)
Q Consensus 297 ~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hl 375 (427)
+ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|++++++|+
T Consensus 236 ~----~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hl 311 (370)
T 1chr_A 236 D----NNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTMLDSTIGTSVALQL 311 (370)
T ss_dssp H----HSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECCSCCTTHHHHHHHHH
T ss_pred h----hCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEecCCCccHHHHHHHHHH
Confidence 6 68999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred HhhcCCccee-ccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 376 AAGLGCIKYV-NLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 376 aaal~~~~~~-e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|+.+. |+++|+.+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 312 aaa~~~~~~~~~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 363 (370)
T 1chr_A 312 YSTVPSLPFGCELIGPFVLADTLSHEPLEIRDYELQVPTGVGHGMTLDEDKV 363 (370)
T ss_dssp HTTSSCCTTCBCCCTGGGSSCCSBSSCCEEETTEEECCCCSBTSCCBCHHHH
T ss_pred HHhCCCCccchhcccchhhhhcccCCCceeECCEEECCCCCcCCcccCHHHH
Confidence 9999998874 88888878889999899999999999999999999999865
No 19
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=100.00 E-value=5.6e-71 Score=560.30 Aligned_cols=345 Identities=18% Similarity=0.253 Sum_probs=317.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC---CCCCcchHHHHHHHHHHhhHhcCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV---PLVTGDQTKALVKVREACQFLRQSPP 141 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~---~~~s~~~~~~~~~~~~~~~~l~g~~~ 141 (427)
|||++|+++.+++|++.||.+ +.++|+|+|++|++|||||.+. |.|++++. ...+.+.|.|+|+++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~--------~~~~V~v~td~G~~G~GE~~~~~~~p~~~~e~~---~i~~~l~p~liG~d~ 69 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVN--------KHVIVKIHTDEGLTGIGEMSDFSHLPLYSVDLH---DLKQGLLSILLGQNP 69 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEE--------EEEEEEEEETTSCEEEEEECCCSSSSSCCCCHH---HHHHHHHHHHTTCCT
T ss_pred CEEEEEEEEEEecccCCCccc--------ceEEEEEEECCCCEEEeccccccCCCccchhHH---HHHHHHHHHhCCCCc
Confidence 899999999999999999875 7899999999999999999876 55666543 222458899999999
Q ss_pred CCHHHHHHHHHHHCC-----CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeec----CCCHHHHHHH
Q 014285 142 TTLNFALDEIARILP-----GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIP----AVSPAEASEL 211 (427)
Q Consensus 142 ~~~~~~~~~l~~~~~-----g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~----~~~~~~~~~~ 211 (427)
.+++.+|+.|++.+. +...+++++|||||||||+||.+|+|||+||||. +++||+|++++ ..+++++.++
T Consensus 70 ~~~~~~~~~l~~~~~~~~~~~~g~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~r~~v~~y~t~~~~~~~~~~e~~~~~ 149 (391)
T 3gd6_A 70 FDLMKINKELTDNFPETMYYYEKGSFIRNGIDNALHDLCAKYLDISVSDFLGGRVKEKIKVCYPIFRHRFSEEVESNLDV 149 (391)
T ss_dssp TCHHHHHHHHHHHSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEBCEEECCCSSTTHHHHHHHH
T ss_pred cCHHHHHHHHHHHhhhcccccCcchHHHHHHHHHHHHHHhcccCCcHHHHhCCCcCCeEEeeEEecccccCCCHHHHHHH
Confidence 999999999987643 1234689999999999999999999999999995 88999999998 7789999999
Q ss_pred HHHHhhcCCcEEEEeccCCchhhHHHHHHHHHh-CCCcEEE-EeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh
Q 014285 212 ASKYCKLGFSTLKLNVGRNITADFDVLQAIHAV-HPHCSFI-LDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW 289 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~-~~~~~L~-vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~ 289 (427)
+++++++||++||+|+|.++++|++++++||+. ++++.|+ ||+|++|++++|+++++.|+++++.+.|||||++++|+
T Consensus 150 a~~~~~~G~~~~KiKvG~~~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~~~d~ 229 (391)
T 3gd6_A 150 VRQKLEQGFDVFRLYVGKNLDADEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIESPAPRNDF 229 (391)
T ss_dssp HHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEECCSCTTCH
T ss_pred HHHHHHcCCCEEEEeeCCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceecCCCChhhH
Confidence 999999999999999999999999999999995 8999999 99999999999999999999998733599999999999
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHH
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLA 368 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig 368 (427)
+++++|++ ++++|| ||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|+
T Consensus 230 ~~~~~l~~----~~~iPI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~ 303 (391)
T 3gd6_A 230 DGLYQLRL----KTDYPI--SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQELSVG 303 (391)
T ss_dssp HHHHHHHH----HCSSCE--EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCHHH
T ss_pred HHHHHHHH----HcCCCc--CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecCCCccHHH
Confidence 99999986 689999 999999999999999999999999999997 99999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcce-eccCCCcccccCCCCCceeeeCcEEecCC--CCCcccccCCCcC
Q 014285 369 TGFALHLAAGLGCIKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTN--ARGQGGFLKWTIV 426 (427)
Q Consensus 369 ~~a~~hlaaal~~~~~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~--~pGlGve~d~~~v 426 (427)
++|++|++++++|+.+ .|+++|..+.++++.+++.++||++.+|+ +||||+|+|+++|
T Consensus 304 ~aa~~hlaaa~~~~~~~~e~~~~~~~~~d~~~~~~~~~~G~i~~p~~~~PGlGv~~d~~~l 364 (391)
T 3gd6_A 304 TAAMAHLGCSLTNINHTSDPTGPELYVGDVVKNRVTYKDGYLYAPDRSVKGLGIELDESLL 364 (391)
T ss_dssp HHHHHHHHTTCSSCCSCBCCCGGGGBSCCSBSSCCCEETTEEECCCTTSSBTSCCBCHHHH
T ss_pred HHHHHHHHHhCCCCCccccccchhhhhhccccCCceeECCEEEeCCCCCCCCCcccCHHHH
Confidence 9999999999999999 89998887888999999999999999999 9999999999865
No 20
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=100.00 E-value=9.7e-71 Score=554.45 Aligned_cols=353 Identities=33% Similarity=0.531 Sum_probs=328.3
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchH-HHHHHHHH-HhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQT-KALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~-~~~~~~~~-~~~~l~g~~~~ 142 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+|++|.+||||+.+.+.|+++.. .....+++ ++|.|+|+++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~l~~~l~~~l~g~~~~ 80 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPPTLVITGDSMDSIESAIHHVLKPALLGKSLA 80 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCCTTTTCCCHHHHHHHHHHTHHHHHTTCBGG
T ss_pred CEEEEEEEEEEEccccCCEEecCeeEEEeeEEEEEEEECCCCEEEEEecCCCCcCCCCHHHHHHHHHHHHHHHHcCCCcc
Confidence 79999999999999999999999999999999999999999999999998877776433 34455666 89999999999
Q ss_pred CHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcE
Q 014285 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFST 222 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~ 222 (427)
+++.+|+.|.+.+.+. +++++||||||||++||..|+|||+||||.++++|+|++++..+++++.+.+++++++||++
T Consensus 81 ~~~~~~~~l~~~~~~~--~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~ 158 (366)
T 1tkk_A 81 GYEAILHDIQHLLTGN--MSAKAAVEMALYDGWAQMCGLPLYQMLGGYRDTLETDYTVSVNSPEEMAADAENYLKQGFQT 158 (366)
T ss_dssp GHHHHHHHHHHSSSSC--HHHHHHHHHHHHHHHHHHTTSBHHHHHTCCCSEEEBCEEECSCCHHHHHHHHHHHHHHTCCE
T ss_pred cHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCceeeeEEecCCCHHHHHHHHHHHHHcCCCe
Confidence 9999999998765543 57999999999999999999999999999888999999998889999999999999999999
Q ss_pred EEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhh--CCCCCceEeCCCCCCChhhHHHHHHh
Q 014285 223 LKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLND--MGVIPVLFEQPVHRDDWSGLHDVSNF 298 (427)
Q Consensus 223 iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~--~~l~~~~iEqP~~~~d~~~~~~L~~~ 298 (427)
||+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+++++.|++ +++ .|||||++++|++++++|++
T Consensus 159 iKik~g~~~~~~d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i--~~iEqP~~~~d~~~~~~l~~- 235 (366)
T 1tkk_A 159 LKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGI--ELVEQPVHKDDLAGLKKVTD- 235 (366)
T ss_dssp EEEECCSSCHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCE--EEEECCSCTTCHHHHHHHHH-
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCc--eEEECCCCcccHHHHHHHHh-
Confidence 9999997 89999999999999 57999999999999999999999999999 886 59999999999999999986
Q ss_pred hccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHh
Q 014285 299 ARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377 (427)
Q Consensus 299 ~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaa 377 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|+++||++++++++|+++
T Consensus 236 ---~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~~a~~~laa 312 (366)
T 1tkk_A 236 ---ATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIETKLGITAAAHFAA 312 (366)
T ss_dssp ---HCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCSSCCHHHHHHHHHHHH
T ss_pred ---hCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEecCccccHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999997 99999999999999999999999999999999999999
Q ss_pred hcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCc
Q 014285 378 GLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTI 425 (427)
Q Consensus 378 al~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~ 425 (427)
++++..++|+++|+++.++++.+++.++||++.+|++||||+++|++.
T Consensus 313 a~~~~~~~el~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~ 360 (366)
T 1tkk_A 313 SKRNITRFDFDAPLMLKTDVFNGGITYSGSTISMPGKPGLGIIGAALL 360 (366)
T ss_dssp HCTTEEEECCCGGGGBSSCCEEESCEEETTEEECCCSSBTCEEEECC-
T ss_pred cCCCCceecccchhhcccccccCCceEECCEEECCCCCccceEecccc
Confidence 999999999998887778888888899999999999999999999864
No 21
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=100.00 E-value=1.2e-70 Score=557.50 Aligned_cols=352 Identities=18% Similarity=0.266 Sum_probs=318.1
Q ss_pred eeEEEEEEEEEEeeccc--cccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSA--PLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~--p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~ 142 (427)
|||++|+++.+++|+++ ||.++.++++.++.++|+|+|++|++||||+.. ++++.+.. ...++.+.|.|+|+++.
T Consensus 3 MkI~~i~~~~~~~pl~~~~p~~~a~~~~~~~~~~~V~v~td~G~~G~GE~~~-~~~~~~~~--~~~i~~l~p~l~G~d~~ 79 (389)
T 3ozy_A 3 LKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGVTGVGSPSG-PYDLAVLK--RAIEDVIGPQLIGEDPA 79 (389)
T ss_dssp CCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSCCEEECCCS-SSCHHHHH--HHHHHTTHHHHTTSCTT
T ss_pred CEEEEEEEEEEeccCcCCCcccccccccccceEEEEEEEECCCCEEEEecCC-CCCchHHH--HHHHHHHHHHHcCCCcc
Confidence 89999999999999999 999999999999999999999999999999983 33222222 22345689999999999
Q ss_pred CHHHHHHHHHHH--CC----CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCc-eeeeeee-c-CCCHHHHHHHH
Q 014285 143 TLNFALDEIARI--LP----GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNS-LSTAITI-P-AVSPAEASELA 212 (427)
Q Consensus 143 ~~~~~~~~l~~~--~~----g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~-ip~~~~i-~-~~~~~~~~~~~ 212 (427)
+++.+|+.|++. +. +...+++++|||+|||||+||.+|+|||+||||. +++ +|+|.++ + ..+++++.+.+
T Consensus 80 ~~~~~~~~l~~~~~~~~~g~~~~~~~A~said~AlwDl~gK~~g~Pl~~LLGg~~r~~~v~~y~~~~~~~~~~e~~~~~a 159 (389)
T 3ozy_A 80 NINYLWHKVFHGEVSRNLGHRSVGIAAMSGVDIALWDLKGRAMNQPIYQLLGGKFHTRGVRAYASSIYWDLTPDQAADEL 159 (389)
T ss_dssp CHHHHHHHHHHHTHHHHHCSBSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTSCSSTTCEEEEEEEECSSCCHHHHHHHH
T ss_pred hHHHHHHHHHhhhhhhccCCchHHHHHHHHHHHHHHHHhHhHcCCCHHHHhCCcccCCceeeEEecCCCCCCHHHHHHHH
Confidence 999999999764 21 2235789999999999999999999999999998 788 9999988 7 78999999999
Q ss_pred HHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhh
Q 014285 213 SKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSG 291 (427)
Q Consensus 213 ~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~ 291 (427)
++++++||++||+|+|.++++|++++++||+ .++++.|+||+|++|++++|+++++.|+++++ .|||||++++|+++
T Consensus 160 ~~~~~~G~~~iKiKvG~~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i--~~iEqP~~~~d~~~ 237 (389)
T 3ozy_A 160 AGWVEQGFTAAKLKVGRAPRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGC--YWFEEPLSIDDIEG 237 (389)
T ss_dssp HHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTC--SEEESCSCTTCHHH
T ss_pred HHHHHCCCCEEeeccCCCHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCC--CEEECCCCcccHHH
Confidence 9999999999999999999999999999999 58999999999999999999999999999997 49999999999999
Q ss_pred HHHHH-HhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHH
Q 014285 292 LHDVS-NFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLAT 369 (427)
Q Consensus 292 ~~~L~-~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~ 369 (427)
+++|+ + ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++ +|+|++
T Consensus 238 ~~~l~~~----~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~-~~~i~~ 312 (389)
T 3ozy_A 238 HRILRAQ----GTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPHTF-NDIITV 312 (389)
T ss_dssp HHHHHTT----CCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCCT-TSHHHH
T ss_pred HHHHHhc----CCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC-CcHHHH
Confidence 99998 5 78999999999999999999999999999999999997 99999999999999999999974 899999
Q ss_pred HHHHHHHhhcCCcceeccCCC-cccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 370 GFALHLAAGLGCIKYVNLNTP-FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 370 ~a~~hlaaal~~~~~~e~~~p-~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++|++++++|+.++|++.. ..+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 313 aa~~hlaaa~~~~~~~e~d~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 370 (389)
T 3ozy_A 313 AANLHLVAASPHPAMFEWDITHNDLMTRLASYDLKLENGLVQPPQGPGLGFEIDWDFV 370 (389)
T ss_dssp HHHHHHHHHCCSCCCEEEECSSCGGGTTSBSCCCCCBTTEECCCCSSBTCSCBCHHHH
T ss_pred HHHHHHHHhCCCCeeEEecCccchhhHhhccCCceeECCEEECCCCCcCCcccCHHHH
Confidence 999999999999988876532 234567777888999999999999999999999865
No 22
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=100.00 E-value=1.1e-70 Score=557.32 Aligned_cols=349 Identities=22% Similarity=0.335 Sum_probs=313.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHH-HHHHHHH-HhhHhc---
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTK-ALVKVRE-ACQFLR--- 137 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~-~~~~~~~-~~~~l~--- 137 (427)
|||++++++.+++|+++||.++.++++.++.++|+|+|++|++|||||.+. |.|++++.+ ....+++ +.|.|+
T Consensus 1 MkI~~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~~p~~~~e~~~~~~~~l~~~l~p~l~~~~ 80 (388)
T 3qld_A 1 MSLQTCVLHRLSLPLKFPMRTAHGHIREKQAILVQLVDADGIEGWSECVALAEPTYTEECTDTAWVMLVHHLVPRFARWL 80 (388)
T ss_dssp -CEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEECCCSSTTSSSCCHHHHHHHHHHTHHHHHHHHH
T ss_pred CEEEEEEEEEEecccCCceEccceEEEeeeEEEEEEEECCCCEEEEecccCCCCccccccHHHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999999999999999999999999999999864 567765543 3334444 788998
Q ss_pred ----CCCCCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCC-HHHHHHHH
Q 014285 138 ----QSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVS-PAEASELA 212 (427)
Q Consensus 138 ----g~~~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~-~~~~~~~~ 212 (427)
|+++.+++.+++.+. .+.|. +++++||||||||++||..|+|||+||||.+++||+|+++++.+ ++++.+++
T Consensus 81 ~~~~G~~~~~~~~~~~~~~-~~~g~--~~A~said~ALwDl~gk~~g~Pl~~LLGg~r~~v~~~~~~~~~~~~e~~~~~~ 157 (388)
T 3qld_A 81 RAASQDQDVDPRTVCEALR-DVRGN--RMSVAAIEMAVWDWYAARTGQPLVGLLGGGRDRVEVSATLGMSESLDVLIQSV 157 (388)
T ss_dssp TSGGGSSCCCGGGGGGGGT-TCCSC--HHHHHHHHHHHHHHHHHHHTCCHHHHTTCCCSEEEBEEEECCCSCHHHHHHHH
T ss_pred cccCCCCccCHHHHHHHHH-HccCc--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCeEEEeEEecCCCCHHHHHHHH
Confidence 999988888877663 24443 67899999999999999999999999999999999999998876 99999999
Q ss_pred HHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhH
Q 014285 213 SKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGL 292 (427)
Q Consensus 213 ~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~ 292 (427)
++++++||++||+|+|. ++|++++++||+..|++.||||||++|++++|++ +++|+++++ .|||||++++|++++
T Consensus 158 ~~~~~~G~~~~K~Kv~~--~~d~~~v~avR~~~~~~~l~vDaN~~~~~~~A~~-~~~l~~~~i--~~iEeP~~~~d~~~~ 232 (388)
T 3qld_A 158 DAAVEQGFRRVKLKIAP--GRDRAAIKAVRLRYPDLAIAADANGSYRPEDAPV-LRQLDAYDL--QFIEQPLPEDDWFDL 232 (388)
T ss_dssp HHHHHTTCSEEEEECBT--TBSHHHHHHHHHHCTTSEEEEECTTCCCGGGHHH-HHHGGGGCC--SCEECCSCTTCHHHH
T ss_pred HHHHHhCCCeEEEEeCc--HHHHHHHHHHHHHCCCCeEEEECCCCCChHHHHH-HHHHhhCCC--cEEECCCCcccHHHH
Confidence 99999999999999986 6899999999997799999999999999999996 899999997 499999999999999
Q ss_pred HHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHH
Q 014285 293 HDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGF 371 (427)
Q Consensus 293 ~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a 371 (427)
++|++ ++++|||+||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|++++
T Consensus 233 ~~l~~----~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa 308 (388)
T 3qld_A 233 AKLQA----SLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLRALDVAGEAGMAAWVGGMYETGVGRVH 308 (388)
T ss_dssp HHHHH----HCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHH
T ss_pred HHHHH----hCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHHHHHHHHHCCCeEEecCccchHHHHHH
Confidence 99986 68999999999999999999999999999999999997 99999999999999999999999999999999
Q ss_pred HHHHHhhcCCccee-ccCC-CcccccCCCCCce-eeeCcEEecCCCCCcccccCCCcC
Q 014285 372 ALHLAAGLGCIKYV-NLNT-PFLLSEDPFVGGC-EVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 372 ~~hlaaal~~~~~~-e~~~-p~~~~~~~~~~~~-~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++|+++ ++|+.+. +++. ..++.++++.+++ .++||++.+|++||||+|+|+++|
T Consensus 309 ~~~laa-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 365 (388)
T 3qld_A 309 GLIAAA-LPLMRYATDLGPSDRYFEQDVLKEPIAFVEPGVIQVPQCAGVADWVDRDAV 365 (388)
T ss_dssp HHHHHT-STTBCSCBSCCCGGGTCSSCSBSSCCCCSBTTEEECCCCSSSGGGBCHHHH
T ss_pred HHHHHc-CCCCCcccccCcchhhHHhhcccCCCceeECCEEECCCCCcCCceeCHHHH
Confidence 999987 8887765 5553 2446678888888 899999999999999999999865
No 23
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=100.00 E-value=7.9e-70 Score=550.04 Aligned_cols=349 Identities=17% Similarity=0.255 Sum_probs=307.4
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||++|+++.+++||++||.++.++++.++.++|||+|++|++|||||.+.+ .. .....+.+.|.|+|+++.++
T Consensus 1 MKIt~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~i~td~G~~G~GE~~~~~-----~~-~~~~~~~~~~~liG~d~~~~ 74 (378)
T 4hpn_A 1 MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGTVGWGECLGPA-----RP-NAAVVQAYSGWLIGQDPRQT 74 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECSCH-----HH-HHHHHHHHHTTTTTSCTTCH
T ss_pred CEEEEEEEEEEeccCCCCeECCCEEEEEEEEEEEEEEECCCCEEEEEecCCc-----ch-HHHHHHHHHHHHcCCChHHH
Confidence 8999999999999999999999999999999999999999999999996531 11 11224567899999999999
Q ss_pred HHHHHHHHHHCCC----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCC-----CHHHHHHHHHH
Q 014285 145 NFALDEIARILPG----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAV-----SPAEASELASK 214 (427)
Q Consensus 145 ~~~~~~l~~~~~g----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~-----~~~~~~~~~~~ 214 (427)
+.+|+.|++.+.. ....++++|||+||||++||..|+|||+||||. ++++|+|.+.+.. +++++.+++++
T Consensus 75 e~~~~~l~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLGg~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 154 (378)
T 4hpn_A 75 EKIWAVLYNALRDQGQRGLSLTALSGIDIALWDIKGKHYGASISMLLGGRWRESVRAYATGSFKRDNVDRVSDNASEMAE 154 (378)
T ss_dssp HHHHHHHHHHTCTTCSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEEEEECCCBCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHhhhhccCccccccCCccccCcceeeeeccccccchhHHHHHHHHHH
Confidence 9999999876432 134578999999999999999999999999997 6889999886542 34566777788
Q ss_pred HhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHH
Q 014285 215 YCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLH 293 (427)
Q Consensus 215 ~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~ 293 (427)
++++||+++|+|+|.++++|++++++||+ .+|++.||||||++|++++|++++++|+++++ .|||||++++|+++++
T Consensus 155 ~~~~Gf~~~K~k~g~~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i--~~iEeP~~~~d~~~~~ 232 (378)
T 4hpn_A 155 RRAEGFHACKIKIGFGVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFGI--DWFEEPVVPEQLDAYA 232 (378)
T ss_dssp HHHTTCSEEEEECCSCHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGGCC--SCEECCSCTTCHHHHH
T ss_pred HHHhccceecccccCChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhccc--chhhcCCCccchhhhH
Confidence 88999999999999999999999999999 58999999999999999999999999999997 4999999999999999
Q ss_pred HHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHH
Q 014285 294 DVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFA 372 (427)
Q Consensus 294 ~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~ 372 (427)
+|++ ++++|||+||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+ ++++++++++
T Consensus 233 ~l~~----~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v~~h~-~~~~i~~aa~ 307 (378)
T 4hpn_A 233 RVRA----GQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPHV-WGTGVQIAAA 307 (378)
T ss_dssp HHHH----HSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEECCBC-CSSHHHHHHH
T ss_pred HHHh----hCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeEEeCC-CCcHHHHHHH
Confidence 9986 78999999999999999999999999999999999997 9999999999999999998875 6899999999
Q ss_pred HHHHhhcCCccee--------ccCC-CcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 373 LHLAAGLGCIKYV--------NLNT-PFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 373 ~hlaaal~~~~~~--------e~~~-p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|+++++++..+. +++. ...+.++++.++++++||++.+|++||||||+|+|+|
T Consensus 308 ~h~~aa~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 370 (378)
T 4hpn_A 308 LQFMAAMTPDPVRVNPIEPIMEFDRTHNPFRQAVLREPLEAVNGVVTIPDGPGLGIEINRDAL 370 (378)
T ss_dssp HHHHHHCCCSSCCSSCCCCCEEEECSCCHHHHHTBSSCCCCBTTEEECCCSSBTSCCBCHHHH
T ss_pred HHHHHHcCcccccccccccceeeccccchhhhhhccCCCeeECCEEECCCCCCCcceECHHHH
Confidence 9999988664322 2221 1224466788889999999999999999999999875
No 24
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=100.00 E-value=6.5e-70 Score=549.01 Aligned_cols=352 Identities=20% Similarity=0.398 Sum_probs=325.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcch-HHHHHHHHH-HhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQ-TKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~-~~~~~~~~~-~~~~l~g~~~~ 142 (427)
|||++++++.+++|++.||.++.++.+.++.++|+|+|++|.+||||+.+.+.|+++. ......+++ ++|.|+|+++.
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~i~~~l~~~l~g~d~~ 80 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGIIGYGEGVADDHVTGESWESTFHTLKHTLTPALIGQNPM 80 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCHHHHSCCHHHHHHHHHHTHHHHHTTCCTT
T ss_pred CEEEEEEEEEEeccccCCeEecceeEEeeeEEEEEEEECCCCEEEEEecCCCCcCCCCHHHHHHHHHHHHHHHHcCCCcc
Confidence 7999999999999999999999999999999999999999999999999876555533 334445666 89999999999
Q ss_pred CHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcCCc
Q 014285 143 TLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLGFS 221 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~ 221 (427)
+++.+|+.|.+...+. +++++||||||||++||..|+|||+||||. ++++|+|.+++..+++++.+.+++++++||+
T Consensus 81 ~~~~~~~~l~~~~~~~--~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~v~~~~~i~~~~~~~~~~~a~~~~~~Gf~ 158 (369)
T 2p8b_A 81 NIEKIHDMMDNTIYGV--PTAKAAIDIACFDIMGKKLNQPVYQLIGGRYHEEFPVTHVLSIADPENMAEEAASMIQKGYQ 158 (369)
T ss_dssp CHHHHHHHHHHHCSCC--HHHHHHHHHHHHHHHHHHTTSBGGGGTTCCCCSCEECCEEECSCCHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCceeeeEEecCCChHHHHHHHHHHHHcCcC
Confidence 9999999998776543 578999999999999999999999999998 7899999999988999999999999999999
Q ss_pred EEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHH-HHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 222 TLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAV-EVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 222 ~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~-~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
++|+|+|.+++.|++++++||+ .++++.|++|+|++|++++|+ ++++.|+++++ .|||||++++|++++++|++
T Consensus 159 ~iKik~g~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~-- 234 (369)
T 2p8b_A 159 SFKMKVGTNVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNI--DWIEQPVIADDIDAMAHIRS-- 234 (369)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCC--SCEECCBCTTCHHHHHHHHH--
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCC--cEEECCCCcccHHHHHHHHH--
Confidence 9999999999999999999999 589999999999999999999 99999999997 49999999999999999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|+++||++++++++|++++
T Consensus 235 --~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~~a~~~laa~ 312 (369)
T 2p8b_A 235 --KTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSMVESSVASSAGFHVAFS 312 (369)
T ss_dssp --TCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCSSCCHHHHHHHHHHHTT
T ss_pred --hCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecCCCccHHHHHHHHHHHHc
Confidence 68999999999999999999999999999999999997 999999999999999999999999999999999999999
Q ss_pred cCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 379 LGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 379 l~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++.+.|+++|+++.++ .+++.++||++.+|++||||+++|+++|
T Consensus 313 ~~~~~~~el~~~~~~~~~--~~~~~~~~G~~~~p~~PGlGv~~d~~~l 358 (369)
T 2p8b_A 313 KKIITSVELTGPLKFTKD--IGNLHYDVPFIRLNEKPGLGIEINEDTL 358 (369)
T ss_dssp CTTEEEECCCHHHHBSCC--SSCCCCBTTEECCCCCSBTCCCCCHHHH
T ss_pred CCCCceeccCcchhcccc--CCCceeECCEEeCCCCCcCCCccCHHHH
Confidence 999999998888655556 6778899999999999999999999865
No 25
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=100.00 E-value=2.1e-69 Score=546.29 Aligned_cols=354 Identities=18% Similarity=0.292 Sum_probs=312.5
Q ss_pred CcceeeEEEEEEEEEEeec-cccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC-CCCcchHH-HHHHHHHHhhHhc
Q 014285 61 ETFWVDVQRAEGRELNVAL-SAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP-LVTGDQTK-ALVKVREACQFLR 137 (427)
Q Consensus 61 ~~~~~~I~~i~~~~~~~pl-~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~-~~s~~~~~-~~~~~~~~~~~l~ 137 (427)
.+-.|||++|+++.+++|+ +.||+++.++.+.++.++|||+||+|++|||||++.+ .++.+..+ ....++.+.+.+.
T Consensus 6 ~~~sMKI~~I~~~~~~lPl~~~p~~~a~g~~~~~~~~lV~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 85 (376)
T 4h2h_A 6 HHHSLKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGTIGWGETCPVGPTYAEAHAGGALAALEVLASGLA 85 (376)
T ss_dssp ---CCBEEEEEEEEEEEEBTTCCBCCTTCCBSEEEEEEEEEEETTSCEEEEEECCSSSSSSSCCHHHHHHHHHHHHHTTT
T ss_pred CCCCeEEeEEEEEEEecccCCCCeEecCEEEEEEEEEEEEEEECCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHhc
Confidence 3456999999999999998 6699999999999999999999999999999998764 34333333 3334567889999
Q ss_pred CCCCCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHh
Q 014285 138 QSPPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYC 216 (427)
Q Consensus 138 g~~~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~ 216 (427)
|+++.+.+ ++..+...+.|+ +++++|||+||||++||..|+|||+||||. ++++|+|++++..+++++.+++++++
T Consensus 86 g~d~~~~~-~~~~~~~~~~~~--~~A~said~ALwDl~gK~~g~Pl~~LLGG~~r~~v~~y~s~~~~~~~~~~~~a~~~~ 162 (376)
T 4h2h_A 86 GAEALPLP-LHTRMDSLLCGH--NYAKSALDIAVHDLWGKRLGVPVHELLGGALTDSVSSYYSLGVMEPDEAARQALEKQ 162 (376)
T ss_dssp TCBSSHHH-HHHHHHHHCSCC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEECEEEECSCCHHHHHHHHHHHH
T ss_pred CCccCcHH-HHHHHHHhhccc--HHHHHHHHHhhhHHHHHhcCCCceecCCCCcCCceeEeeecccCCHHHHHHHHHHHH
Confidence 99998876 445555556665 468999999999999999999999999997 78999999999999999999999999
Q ss_pred hcCCcEEEEeccC-CchhhHHHHHHHHH-h-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHH
Q 014285 217 KLGFSTLKLNVGR-NITADFDVLQAIHA-V-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLH 293 (427)
Q Consensus 217 ~~Gf~~iKlKiG~-~~~~d~~~l~~ir~-~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~ 293 (427)
++||+++|+|+|. ++++|+++++++|+ + ++++.||||||++|++++|+++++.|+++++ |+|||++ ++++++
T Consensus 163 ~~G~~~~KiKvg~~~~~~di~~v~~vr~a~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~---~iEeP~~--~~~~~~ 237 (376)
T 4h2h_A 163 REGYSRLQVKLGARPIEIDIEAIRKVWEAVRGTGIALAADGNRGWTTRDALRFSRECPDIPF---VMEQPCN--SFEDLE 237 (376)
T ss_dssp HHTCSEEEEECCSSCHHHHHHHHHHHHHHHTTSCCEEEEECTTCCCHHHHHHHHHHCTTSCE---EEESCSS--SHHHHH
T ss_pred hcCceEEEEecCCCCHHHHHHHHHHHHhhccCCeeEEEEeeccCCCHHHHHHHHHHHhhccc---cccCCcc--hhhhHh
Confidence 9999999999996 67899999999998 5 7999999999999999999999999999874 9999995 588899
Q ss_pred HHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHH
Q 014285 294 DVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFA 372 (427)
Q Consensus 294 ~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~ 372 (427)
+|++ .+++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++++++|+.+|+
T Consensus 238 ~l~~----~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~d~~~~GGit~~~~ia~~a~~~gi~~~~~~~~~~~i~~aa~ 313 (376)
T 4h2h_A 238 AIRP----LCHHALYMDEDGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDDAWGGDIVSAAC 313 (376)
T ss_dssp HHGG----GCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBCSSCSHHHHHHH
T ss_pred hhhh----cccCccccCcccCCHHHHHHHHHhhccCccccccceeCCcHHHHHHHHHHHHcCCCEEeCCCCccHHHHHHH
Confidence 9875 68999999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHhhcCCcce--eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 373 LHLAAGLGCIKY--VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 373 ~hlaaal~~~~~--~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|++++.++... .++..|+...++.+.++++++||++.+|++||||||+|+|+|
T Consensus 314 ~hlaa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~vp~~PGLGveld~e~L 369 (376)
T 4h2h_A 314 THIASTVLPRLMEGAWLAQPYVAEHYDAENGVRIEGGRIRVPQGPGLGLTIDPERF 369 (376)
T ss_dssp HHHHTTSCGGGEEECCCSGGGBSCCSSTTTCCCEETTEEECCCSSBTSCCCCTTTT
T ss_pred HHHHHhCCccccccccccCchhhhhhccCCCCeEECCEEECCCCCCCCcEECHHHc
Confidence 999988755322 245667666677778889999999999999999999999987
No 26
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.8e-69 Score=546.03 Aligned_cols=353 Identities=23% Similarity=0.374 Sum_probs=325.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchH-HHHHHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQT-KALVKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~-~~~~~~~~-~~~~l~g~~ 140 (427)
|||++++++.+++|++.||+++.++++.++.++|+|+| +|++||||+.+. +.|+++.. .....+++ +.|.++|++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l~G~d 79 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEGGSVGGPTWGSESAETIKVIIDNYLAPLLVGKD 79 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEECCSTTTTTSSCCHHHHHHHHHHTHHHHHTTSB
T ss_pred CEEEEEEEEEEEccccCCEEecceEEEeceeEEEEEEE-CCEEEEEEeccCCCCcccCCCHHHHHHHHHHhhHHHHcCCC
Confidence 79999999999999999999999999999999999999 999999999887 56766433 33444554 789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhh-c
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCK-L 218 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~-~ 218 (427)
+.+++.+|+.|.+...+. +++++||||||||++||..|+|||+||||. ++++|+|++++..+++++.+.++++++ +
T Consensus 80 ~~~~~~~~~~l~~~~~~~--~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~v~~~~~~~~~~~e~~~~~a~~~~~~~ 157 (370)
T 1nu5_A 80 ASNLSQARVLMDRAVTGN--LSAKAAIDIALHDLKARALNLSIADLIGGTMRTSIPIAWTLASGDTARDIDSALEMIETR 157 (370)
T ss_dssp TTCHHHHHHHHHHHCSSC--HHHHHHHHHHHHHHHHHHTTCBHHHHHTCCSCSEEEBCEEECSSCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCcCCceEeeEEecCCCHHHHHHHHHHHHHhC
Confidence 999999999998776543 578999999999999999999999999997 789999999988899999999999999 9
Q ss_pred CCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHH
Q 014285 219 GFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVS 296 (427)
Q Consensus 219 Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~ 296 (427)
||+++|+|+|. +++.|++++++||+ .++++.|++|+|++|++++|+++++.|+++++ .|||||++++|++++++|+
T Consensus 158 Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~~~~~~~~l~ 235 (370)
T 1nu5_A 158 RHNRFKVKLGARTPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGV--ELVEQPVPRANFGALRRLT 235 (370)
T ss_dssp SCSEEEEECSSSCHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTC--CEEECCSCTTCHHHHHHHH
T ss_pred CccEEEEecCCCChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCc--ceEeCCCCcccHHHHHHHH
Confidence 99999999996 78899999999999 57899999999999999999999999999997 4999999999999999998
Q ss_pred HhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHH
Q 014285 297 NFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375 (427)
Q Consensus 297 ~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hl 375 (427)
+ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|+++||+|++++++|+
T Consensus 236 ~----~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hl 311 (370)
T 1nu5_A 236 E----QNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGTMLDSTVGTAAALHV 311 (370)
T ss_dssp H----HCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHHHH
T ss_pred H----hCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecCCcchHHHHHHHHHH
Confidence 6 68999999999999999999999999999999999997 999999999999999999999999999999999999
Q ss_pred HhhcCCcce-eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 376 AAGLGCIKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 376 aaal~~~~~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++++..+ .|+++|+.+.++++.+++.++||++.+|++||||+++|++.+
T Consensus 312 aaa~~~~~~~~e~~~~~~~~~d~~~~~~~~~~G~~~~p~~pGlGv~~d~~~l 363 (370)
T 1nu5_A 312 YATLPSLPYGCELIGPWVLGDRLTQQDLEIKDFEVHLPLGSGLGVDLDHDKV 363 (370)
T ss_dssp HTTSSCCTTCBCCCHHHHBSSCSBSSCCCEETTEEECCCSSBTSCCBCHHHH
T ss_pred HhcCCCCCcccccCchhhhccccccCCceEECCEEECCCCCCCCceeCHHHH
Confidence 999999888 788877666788888889999999999999999999999865
No 27
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=100.00 E-value=6.3e-70 Score=552.93 Aligned_cols=347 Identities=18% Similarity=0.264 Sum_probs=309.1
Q ss_pred ceeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCC
Q 014285 63 FWVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPT 142 (427)
Q Consensus 63 ~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~ 142 (427)
.-|||++|+++.+++|++.||.++.++.+.++.++|+|+|++|++|||||.+. +. ....++.+.|.|+|+++.
T Consensus 22 ~mMkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~g-----~~--~~~~i~~l~p~liG~d~~ 94 (398)
T 4dye_A 22 SMMKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGVEGWGETMWG-----AP--VAAIVRRMAPDLIGTSPF 94 (398)
T ss_dssp -CCCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECS-----HH--HHHHHHHHHHHHTTCCTT
T ss_pred CCceEEEEEEEEEeecccccccccccccccceEEEEEEEECCCCEEEEeecCc-----hH--HHHHHHHHHHHHcCCCcc
Confidence 33999999999999999999999999999999999999999999999999752 22 223346789999999999
Q ss_pred CHHHHHHHHHHH--CCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee------cCC---CHHHHHH
Q 014285 143 TLNFALDEIARI--LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI------PAV---SPAEASE 210 (427)
Q Consensus 143 ~~~~~~~~l~~~--~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i------~~~---~~~~~~~ 210 (427)
+++.+|+.|+.. ..|...+++++|||||||||+||..|+|||+||||. +++||+|+++ +.. +++++.+
T Consensus 95 ~~~~~~~~l~~~~~~~g~~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~r~~v~~y~s~~~~~~~g~~~~~~~e~~~~ 174 (398)
T 4dye_A 95 ALEAFHRKQHMVPFFYGYLGYAAIAAVDVACWDAMGKATGQSVTDLLGGAVRDEVPITALITRADAPGATPADLPKAMAE 174 (398)
T ss_dssp CHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEBEEEECGGGSTTCCTTTHHHHHHH
T ss_pred CHHHHHHHHHhhhhhhccccHHHHHHHHHHHHHHHHHHcCCcHHHHcCCCcCCeEEEEEEEeccccCCcccCCCHHHHHH
Confidence 999999988531 112223579999999999999999999999999997 6899999987 443 3689999
Q ss_pred HHHHHhhc-CCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh
Q 014285 211 LASKYCKL-GFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW 289 (427)
Q Consensus 211 ~~~~~~~~-Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~ 289 (427)
++++++++ ||++||+|+|.++++|++++++||+..|++.|+||||++|++++|+++++.|+++++ .|||||++ |+
T Consensus 175 ~a~~~~~~~G~~~~K~KvG~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i--~~iEqP~~--d~ 250 (398)
T 4dye_A 175 HAVRVVEEGGFDAVKLKGTTDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELDL--EYLEDPCV--GI 250 (398)
T ss_dssp HHHHHHHHHCCSEEEEECCSCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCC--SEEECCSS--HH
T ss_pred HHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCC--CEEcCCCC--CH
Confidence 99999999 999999999988999999999999966999999999999999999999999999997 49999999 89
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHH
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLA 368 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig 368 (427)
+++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++.|++|+
T Consensus 251 ~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~~e~~i~ 326 (398)
T 4dye_A 251 EGMAQVKA----KVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNLHSGGELGIA 326 (398)
T ss_dssp HHHHHHHH----HCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSCCCHHH
T ss_pred HHHHHHHh----hCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEEcCCcchHHH
Confidence 99999986 68999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCcceeccCC-CcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 369 TGFALHLAAGLGCIKYVNLNT-PFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 369 ~~a~~hlaaal~~~~~~e~~~-p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
.+|++|++++++|+.+. .+. ...+.++++ +++.++||++.+|++||||+|+|+++|
T Consensus 327 ~aa~l~laaa~p~~~~~-~d~~~~~~~~d~~-~~~~~~~G~i~vp~~PGlGve~d~~~l 383 (398)
T 4dye_A 327 TAAHLAVVSSTPVLSRA-IDSMYYLHADDII-EPLHLENGRLRVPSGPGLGVSVDEDKL 383 (398)
T ss_dssp HHHHHHHHHTCTTCCSC-BCCSGGGBSCCSB-SCCCEETTEEECCCSSBTCCCBCHHHH
T ss_pred HHHHHHHHhcCCcccee-ecccchhhhhhcc-CCceeeCCEEECCCCCCCCceeCHHHH
Confidence 99999999999987653 332 334556666 678899999999999999999999865
No 28
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=100.00 E-value=3.7e-69 Score=548.42 Aligned_cols=354 Identities=19% Similarity=0.290 Sum_probs=313.1
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCC-CCcchH-HHHHHHHH-Hhh-HhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPL-VTGDQT-KALVKVRE-ACQ-FLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~-~s~~~~-~~~~~~~~-~~~-~l~g~~ 140 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+|++|.+||||+.+.+. |+++.. .....+++ ++| .|+|++
T Consensus 3 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~i~~~l~~~~l~G~d 82 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGLVGIADAGDTSSWYRGETQDSITSMICDFFAPKVLLGED 82 (397)
T ss_dssp CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSCEEEEECCCCCTTTTCCCHHHHHHHHHHTHHHHTTTTCC
T ss_pred CEEEEEEEEEEeeeccCCeEeccceEeeCceEEEEEEECCCCEEEEEEecccCccCCCCHHHHHHHHHHhhhhHhhcCCC
Confidence 89999999999999999999999999999999999999999999999998765 455433 34445666 889 899999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+|+.|.....| .+++++||||||||++||..|+|||+||||. ++++|+|++++..+++++.+.+++++++|
T Consensus 83 ~~~~~~l~~~l~~~~~~--~~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~~~~vp~~~~~g~~~~e~~~~~a~~~~~~G 160 (397)
T 2qde_A 83 PTKIEKIVGRMDILTRD--NNQAKATVDFALHDLVGKRFGVPVYQLLGGKTIERIPLGLVLGAGEPEAVAEEALAVLREG 160 (397)
T ss_dssp TTCHHHHHHHHHHHCSS--CHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSSEEBCEECCCSCHHHHHHHHHHHHHHT
T ss_pred hHhHHHHHHHhhhhhcc--chhHHHHHHHHHHHHHHHHhCCcHHHHhCCCCCCCcceEEECCCCCHHHHHHHHHHHHHhh
Confidence 99999999999544544 4689999999999999999999999999997 78999999988789999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHh
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNF 298 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~ 298 (427)
|+++|+|+|.+++.|++++++||+. ++++.|++|+|++|++++|+++++.|+++++ .|||||++++|++++++|++
T Consensus 161 f~~vKik~g~~~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~~~~~~~~l~~- 237 (397)
T 2qde_A 161 FHFVKLKAGGPLKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNL--SKIEQPLPAWDLDGMARLRG- 237 (397)
T ss_dssp CSCEEEECCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCC--SCEECCSCTTCHHHHHHHHT-
T ss_pred hhheeecccCCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCC--CEEECCCChhhHHHHHHHHh-
Confidence 9999999999999999999999995 8999999999999999999999999999997 49999999999999999985
Q ss_pred hccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHh
Q 014285 299 ARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377 (427)
Q Consensus 299 ~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaa 377 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++||++||+||+++++|+++
T Consensus 238 ---~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~ig~aa~~hlaa 314 (397)
T 2qde_A 238 ---KVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGCMVGSGLEASPAAHLLA 314 (397)
T ss_dssp ---TCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECCCSCCHHHHHHHHHHHH
T ss_pred ---hCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999997 99999999999999999999999999999999999999
Q ss_pred hcC------C-----cceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 378 GLG------C-----IKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 378 al~------~-----~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++ + ..++++++|+++.++++.+++.++||++.+|++||||+++|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 374 (397)
T 2qde_A 315 ANDWIAQFPQENAGPLHIHDCLNSRDIDNDIALNVPRFEGGYLYPNDGPGLGIELNEDLV 374 (397)
T ss_dssp HCTTGGGSCBCCCHHHHHTTCSSGGGCCCCSBTTCCEEETTEEECCCSSBTCCCBCHHHH
T ss_pred hCCcccccccccccceeeeecCCchhhhhccccCCceEECCEEECCCCCcCCcccCHHHH
Confidence 998 6 223466777666788888899999999999999999999998865
No 29
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=100.00 E-value=6.3e-70 Score=552.36 Aligned_cols=352 Identities=19% Similarity=0.296 Sum_probs=300.6
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC-CCCCcchHHHHHHHH-HHhhHhcCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQTKALVKVR-EACQFLRQSPP 141 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~-~~~s~~~~~~~~~~~-~~~~~l~g~~~ 141 (427)
.|||++|+++.+++|++.||.++.++++.++.++|+|+|++|++||||+.+. +. .++..... .++ .+.|.|+|+++
T Consensus 9 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~-~~~~~~~~-~i~~~l~p~liG~d~ 86 (392)
T 3ddm_A 9 SITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGAVGWGEVWCNFPA-CGAEHRAR-LVETVLAPLLTARAF 86 (392)
T ss_dssp CBCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSCEEEEECCCCSST-THHHHHHH-HHHHTHHHHHTTSCB
T ss_pred CCEEEEEEEEEEeccCCCcccCcCceeecceEEEEEEEECCCCEEEEEeccCCCC-CchHHHHH-HHHHHHHHHhCCCCc
Confidence 4999999999999999999999999999999999999999999999999632 21 12221221 224 48899999999
Q ss_pred CCHHHHHHHHHHH------CCCC--hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHH
Q 014285 142 TTLNFALDEIARI------LPGS--EFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELAS 213 (427)
Q Consensus 142 ~~~~~~~~~l~~~------~~g~--~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~ 213 (427)
.+++.+|+.|++. ..|+ ..+++++|||||||||+||..|+|||+||||..+++|+|.+. . +++++.+.++
T Consensus 87 ~~~~~~~~~l~~~~~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~~~v~~y~~g-~-~~e~~~~~a~ 164 (392)
T 3ddm_A 87 ADPAQAFAHLEARTAVLAIQTGEPGPLAQAIAGLDIALCDLAARRAGQPLWAWLGGSGDRIGVYASG-I-NPENPEDVVA 164 (392)
T ss_dssp SSHHHHHHHHHHTTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSCCEEEEEEEE-E-CSSSHHHHHH
T ss_pred CCHHHHHHHHHhhhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCCCCCceeEEeec-C-CHHHHHHHHH
Confidence 9999999999764 1233 346789999999999999999999999999999999998873 2 3788889999
Q ss_pred HHhhcCCcEEEEeccCCchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCC-hhh
Q 014285 214 KYCKLGFSTLKLNVGRNITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD-WSG 291 (427)
Q Consensus 214 ~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d-~~~ 291 (427)
+++++||++||+|+|.++++|++++++||+. ++++.|+||+|++|++++|+++++.|+++++ .|||||++++| +++
T Consensus 165 ~~~~~G~~~iKlK~g~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i--~~iEeP~~~~d~~~~ 242 (392)
T 3ddm_A 165 RKAAEGYRAFKLKVGFDDARDVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQL--DWLEEPLRADRPAAE 242 (392)
T ss_dssp HHHHHTCCCEEEECSSCHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCC--SEEECCSCTTSCHHH
T ss_pred HHHHcCCCEEEEecCCCHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCC--CEEECCCCccchHHH
Confidence 9999999999999999999999999999995 8999999999999999999999999999997 49999999999 999
Q ss_pred HHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHH
Q 014285 292 LHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATG 370 (427)
Q Consensus 292 ~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~ 370 (427)
+++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+ +||+|+++
T Consensus 243 ~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~-~~~~i~~a 317 (392)
T 3ddm_A 243 WAELAQ----AAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRYCPHY-LGAGIGLQ 317 (392)
T ss_dssp HHHHHH----HCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEECCEE-CSCHHHHH
T ss_pred HHHHHH----hcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEEecC-CchHHHHH
Confidence 999986 68999999999999999999999999999999999997 9999999999999999999887 69999999
Q ss_pred HHHHHHhhcCC---cceeccCCCcccccCCCCCce-eeeCcEEecCCCCCcccccCCCcC
Q 014285 371 FALHLAAGLGC---IKYVNLNTPFLLSEDPFVGGC-EVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 371 a~~hlaaal~~---~~~~e~~~p~~~~~~~~~~~~-~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++|++++++| ..|+|++.......+++.+++ +++||++.+|++||||+|+|+++|
T Consensus 318 a~~hl~aa~p~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 377 (392)
T 3ddm_A 318 ASAHLLAAVPGLASPGLLGVDANDNPLRSLLSPALATLHEGRITLGGAPGLGVTPDLAAL 377 (392)
T ss_dssp HHHHHHHHSCCSSSCCEEEEESSCCHHHHTTCGGGGGCBTTEEECCSCSBTSCCCCHHHH
T ss_pred HHHHHHHhCCCCCCCceEEecCCcchHHHhccCCcceeeCCEEECCCCCcCCceeCHHHH
Confidence 99999999999 667777643221223777788 899999999999999999999875
No 30
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=100.00 E-value=6.3e-69 Score=543.50 Aligned_cols=342 Identities=17% Similarity=0.259 Sum_probs=309.9
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHH-HHHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~-~~~~~~l~g~~~~~ 143 (427)
|||++++++++++|++.||.++.++.+.++.++|+|+|++|++||||+.+.+.. .......+ +.+.|.|+|+++.+
T Consensus 27 mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~~~---~~~~~~~i~~~l~p~l~G~d~~~ 103 (383)
T 3toy_A 27 AAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVTTDQGVTGHSYLFAYTRL---ALKPLVHLVEDIGRELAGKALVP 103 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEESSSCEEEEEEECSSGG---GHHHHHHHHHHHHHHTTTCBCCH
T ss_pred CEEEEEEEEEEeccCCCcccCccccccceeEEEEEEEECCCCEEEEEeeCCCCc---hHHHHHHHHHHHHHHhCCCCCCc
Confidence 999999999999999999999999999999999999999999999999875421 11222233 56899999999999
Q ss_pred HHHHHHHHHHHC--CCC--hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhc-
Q 014285 144 LNFALDEIARIL--PGS--EFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKL- 218 (427)
Q Consensus 144 ~~~~~~~l~~~~--~g~--~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~- 218 (427)
++ +|+.|++.. .|+ ..+++++|||||||||+||..|+|||+||||.++++|+|.+++..+++++.+++++++++
T Consensus 104 ~e-~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~~~v~~y~s~g~~~~e~~~~~a~~~~~~~ 182 (383)
T 3toy_A 104 VD-LMKAMDAKFRLLGWQGLVGMAVSGLDMAFWDALGQLAGKPVVELLGGSARPIPAYDSYGVLDARDDERTLRTACDEH 182 (383)
T ss_dssp HH-HHHHHHHHTTTTCCSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCCCCEEEEEECSSCCHHHHHHHHHHHHHTS
T ss_pred HH-HHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceEEeEecCCCCHHHHHHHHHHHHHcc
Confidence 99 999998753 232 346899999999999999999999999999999999999998889999999999999999
Q ss_pred CCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHH
Q 014285 219 GFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVS 296 (427)
Q Consensus 219 Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~ 296 (427)
||++||+|+|. ++++|++++++||+ .+|++.|+||+|++|++++|++++++|+++++ .|||||++++|++++++|+
T Consensus 183 G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i--~~iEeP~~~~d~~~~~~l~ 260 (383)
T 3toy_A 183 GFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDL--TWIEEPVPQENLSGHAAVR 260 (383)
T ss_dssp CCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCC--SEEECCSCTTCHHHHHHHH
T ss_pred CCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCC--CEEECCCCcchHHHHHHHH
Confidence 99999999997 78999999999999 58999999999999999999999999999997 4999999999999999998
Q ss_pred HhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHH
Q 014285 297 NFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHL 375 (427)
Q Consensus 297 ~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hl 375 (427)
+ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++.+ +++|+
T Consensus 261 ~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~~~------a~lhl 330 (383)
T 3toy_A 261 E----RSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSSHILPE------ASAHV 330 (383)
T ss_dssp H----HCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBCCCSCHH------HHHHH
T ss_pred h----hcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCHHH------HHHHH
Confidence 6 68999999999999999999999999999999999997 9999999999999999999999754 57899
Q ss_pred HhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 376 AAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 376 aaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++++..++|+.. +.++++.+++.++|| +.+|++||||+|+|+++|
T Consensus 331 ~aa~p~~~~~e~~~---~~~~~~~~~~~~~~G-i~~p~~PGlGve~d~~~l 377 (383)
T 3toy_A 331 LPVTPTAHFLEVLD---FAGAILTEPLRVIDG-KVTAKGPGLGLAWNESAV 377 (383)
T ss_dssp GGGCTTBCCEEECC---SSGGGBSSCCCCBTT-EECCCCSBTSCCBCHHHH
T ss_pred HHhCCCCceeeccc---hhhhhccCCCeeeCC-EECCCCCcCCccCCHHHH
Confidence 99999998887652 345677788899999 999999999999999875
No 31
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=100.00 E-value=2.7e-69 Score=549.05 Aligned_cols=348 Identities=17% Similarity=0.263 Sum_probs=313.8
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHHH-HHHHHH-HhhHhcCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTKA-LVKVRE-ACQFLRQS 139 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~~-~~~~~~-~~~~l~g~ 139 (427)
.|||++|+++.+++|++.||.++.++.+.++.++|+|+| +|++|||||.+. |.|++++.+. ...+++ +.|.|+|+
T Consensus 6 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~lV~v~t-~G~~G~GE~~~~~~p~~~~et~~~~~~~i~~~l~p~liG~ 84 (400)
T 3mwc_A 6 SARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIRE-GDLFGYGESAPFEEPFYLGETLETTKVILKNHLLPMILGK 84 (400)
T ss_dssp CCCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEEE-TTEEEEEEECCBSSTTSTTCBHHHHHHHHHHTHHHHHTTC
T ss_pred CcEEEEEEEEEEeccccCceEccCceEeeeeEEEEEEEE-CCeEEEEecccCCCCccccCcHHHHHHHHHHHHHHHHcCC
Confidence 499999999999999999999999999999999999999 999999999986 5677655443 334444 78999999
Q ss_pred CCCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhC-------------CCCCceeeeeeecCC-C-
Q 014285 140 PPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFG-------------GASNSLSTAITIPAV-S- 204 (427)
Q Consensus 140 ~~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg-------------g~~~~ip~~~~i~~~-~- 204 (427)
++.+++.+|+.|+..+.|+ +++++||||||||++||..|+|||+||| +.+++||+|++++.. +
T Consensus 85 d~~~~e~~~~~l~~~~~g~--~~A~said~ALwDl~gk~~g~Pl~~LLGG~~~~~~~~~~~~~~r~~v~~~~s~g~~~~~ 162 (400)
T 3mwc_A 85 EPLSIEEFNHLIKNGIRGN--HFARCGVENAYWDLIAKKNKISLKAMIEKKMKNLGVKQEYLASNNYIESGAALGIPEDG 162 (400)
T ss_dssp CCSSHHHHHHHHHHSCCSC--HHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHHTTCCGGGGCBCSEEEBCEEECCCTTC
T ss_pred CCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCcccccccccccccCCCeEEeeEEeccCCCC
Confidence 9999999999998766665 4689999999999999999999999999 568899999998854 6
Q ss_pred -HHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeC
Q 014285 205 -PAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282 (427)
Q Consensus 205 -~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEq 282 (427)
++++.+++++++++||++||+|+|. ++|++++++||+ .++++.|+||||++|++++ ++++++|+++++ .||||
T Consensus 163 ~~e~~~~~a~~~~~~G~~~iKlKv~~--~~d~~~v~avR~a~G~~~~L~vDaN~~w~~~~-~~~~~~l~~~~i--~~iEq 237 (400)
T 3mwc_A 163 RIETLIHQVEESLQEGYRRIKIKIKP--GWDVEPLQETRRAVGDHFPLWTDANSSFELDQ-WETFKAMDAAKC--LFHEQ 237 (400)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECBT--TBSHHHHHHHHHHHCTTSCEEEECTTCCCGGG-HHHHHHHGGGCC--SCEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCc--chHHHHHHHHHHhcCCCCEEEEeCCCCCCHHH-HHHHHHHHhcCC--CEEeC
Confidence 9999999999999999999999974 789999999999 5799999999999999999 999999999997 49999
Q ss_pred CCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcc
Q 014285 283 PVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 283 P~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s 361 (427)
|++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++||
T Consensus 238 P~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 313 (400)
T 3mwc_A 238 PLHYEALLDLKELGE----RIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGGT 313 (400)
T ss_dssp CSCTTCHHHHHHHHH----HSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCChhhHHHHHHHHh----hCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEEEecC
Confidence 999999999999986 68999999999999999999999999999999999997 9999999999999999999999
Q ss_pred cCchhHHHHHHHHHHhhcCCccee-ccCCCc-cccc--CCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 362 MIETRLATGFALHLAAGLGCIKYV-NLNTPF-LLSE--DPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 362 ~~es~ig~~a~~hlaaal~~~~~~-e~~~p~-~~~~--~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++||+|+++|++|+++ ++|+.+. +++.+. ++.+ |++. +.++||++.+|++||||||+|+++|
T Consensus 314 ~~es~i~~aa~~hlaa-~~~~~~~~d~~~~~~~~~~~~d~~~--~~~~~G~i~~p~~PGlGve~d~~~l 379 (400)
T 3mwc_A 314 MPESGLGARFLISLAS-FRGFVFPADVAASEKWYGKGNDLVE--NTMTDGKIYVPDEPGASFDMTLSHL 379 (400)
T ss_dssp SCCCHHHHHHHHHHTT-BTTBCSCBCCCCHHHHHCTTTSSSC--CCEETTEEECCCSBTTTTTCCHHHH
T ss_pred CCCCHHHHHHHHHHHc-CCCCcceeccCchhhhhhcccCeeE--EEEECCEEECCCCCCcCcccCHHHH
Confidence 9999999999999988 8888765 455542 2344 6666 7899999999999999999999865
No 32
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=1.4e-68 Score=542.32 Aligned_cols=350 Identities=18% Similarity=0.272 Sum_probs=314.0
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHH-HHHHHHH-HhhHhcCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTK-ALVKVRE-ACQFLRQS 139 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~-~~~~~~~-~~~~l~g~ 139 (427)
.|||++++++.+++|++.||.++.++++.++.++|+|+|++|.+||||+.+. |.|+++..+ ....+++ +.|.|+|+
T Consensus 19 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~p~l~G~ 98 (386)
T 1wue_A 19 HMNIQSIETYQVRLPLKTPFVTSYGRLEEKAFDLFVITDEQGNQGFGELVAFEQPDYVQETLVTERFIIQQHLIPLLLTE 98 (386)
T ss_dssp CCCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCSSTTSSSCCHHHHHHHHHHTHHHHHTTS
T ss_pred cCEEEEEEEEEEecccCCCccccceEEecCcEEEEEEEECCCCEEEEEeecCCCCcccCCcHHHHHHHHHHHHHHHHcCC
Confidence 3999999999999999999999999999999999999999999999999874 456664433 3334555 78999999
Q ss_pred CCCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCC-CHHHHHHHHHHHhhc
Q 014285 140 PPTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV-SPAEASELASKYCKL 218 (427)
Q Consensus 140 ~~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~-~~~~~~~~~~~~~~~ 218 (427)
++.+++.+|+.|.. +.|. +++++||||||||++||..|+|||+||||.++++|+|++++.. +++++.+++++++++
T Consensus 99 d~~~~~~l~~~l~~-~~g~--~~A~~aid~AlwDl~~k~~g~Pl~~llGg~~~~v~~~~~~g~~~~~~~~~~~a~~~~~~ 175 (386)
T 1wue_A 99 AIEQPQEVSTIFEE-VKGH--WMGKAALETAIWDLYAKRQQKSLTEFFGPTRRKIPVGISLGIQEDLPQLLKQVQLAVEK 175 (386)
T ss_dssp CCCSTHHHHHHGGG-SCSC--HHHHHHHHHHHHHHHHHHTTSBGGGGSSSCCSEEECCEEECCCSCHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHH-ccCc--hHHHHHHHHHHHHHHHHHhCCcHHHHhCCCCCeeEeeEEecCCCCHHHHHHHHHHHHHh
Confidence 99999999998865 4454 6789999999999999999999999999988899999988754 699999999999999
Q ss_pred CCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHh
Q 014285 219 GFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNF 298 (427)
Q Consensus 219 Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~ 298 (427)
||+++|+|+|+ ++|++++++||+..|++.|+||||++|++++| ++++.|+++++ .|||||++++|++++++|++
T Consensus 176 G~~~~KiKvg~--~~d~~~v~avr~a~~~~~l~vDaN~~~~~~~a-~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~- 249 (386)
T 1wue_A 176 GYQRVKLKIRP--GYDVEPVALIRQHFPNLPLMVDANSAYTLADL-PQLQRLDHYQL--AMIEQPFAADDFLDHAQLQR- 249 (386)
T ss_dssp TCSCEEEECBT--TBSHHHHHHHHHHCTTSCEEEECTTCCCGGGH-HHHHGGGGSCC--SCEECCSCTTCSHHHHHHHT-
T ss_pred hhheEEEeeCc--HHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHH-HHHHHHHhCCC--eEEeCCCCcccHHHHHHHHH-
Confidence 99999999985 67999999999977999999999999999999 99999999997 49999999999999999985
Q ss_pred hccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHh
Q 014285 299 ARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377 (427)
Q Consensus 299 ~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaa 377 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|+.++++|++
T Consensus 250 ---~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~hla- 325 (386)
T 1wue_A 250 ---ELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLGGMFESGVGRALNLQFA- 325 (386)
T ss_dssp ---TCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHH-
T ss_pred ---hcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHHHHHHHHHCCCeEEECCCcccHHHHHHHHHHH-
Confidence 68999999999999999999999999999999999997 9999999999999999999999999999999999996
Q ss_pred hcCCccee-ccCCCc-ccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 378 GLGCIKYV-NLNTPF-LLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 378 al~~~~~~-e~~~p~-~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++.+. +++.+. ++.++++.+++.++||++.+|++||||+++|++++
T Consensus 326 a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 376 (386)
T 1wue_A 326 SQPTFSFPGDISATERYFYEDIITEPFILEQGTMTVPQGLGIGVTLSQTNL 376 (386)
T ss_dssp TSTTCCSCCSCCCGGGTBSCCSBSSCCCEETTEEECCCSSBTCCCBCHHHH
T ss_pred hCCCCCcccccCchhhhhhhccccCCcEEECCEEECCCCCcCCceeCHHHH
Confidence 68887653 444332 24677778888999999999999999999999865
No 33
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=100.00 E-value=9e-69 Score=540.88 Aligned_cols=346 Identities=17% Similarity=0.243 Sum_probs=296.8
Q ss_pred eeEEEEEEEEEEeeccccc-cccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHH-HHhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPL-SLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVR-EACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~-~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~-~~~~~l~g~~~~ 142 (427)
|||++|+++.+++|++.|| +++.++.+.++.++|+|+||+|++||||+.+.+.+.++ ......++ .+.|.|+|+++.
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~~a~~~~~~~~~v~V~v~td~G~~G~GE~~~~~~~~~~-~~~~~~i~~~l~p~liG~d~~ 79 (372)
T 3tj4_A 1 MKITAVEPFILHLPLTSESISDSTHSITHWGVVGAKITTSDGIEGYGFTGTHAHLPSD-RLITSCISDCYAPLLLGEDAS 79 (372)
T ss_dssp CBEEEEEEEEEEEECC------------EEEEEEEEEEETTSCEEEEEEEECCCHHHH-HHHHHHHHHTTHHHHTTSBTT
T ss_pred CEEEEEEEEEEEecCCCCccCCCccccCceeEEEEEEEECCCCEEEEeccCccccCcH-HHHHHHHHHHHHHHhCCCChh
Confidence 8999999999999999999 99999999999999999999999999999875421121 11222344 488999999999
Q ss_pred CHHHHHHHHHHHC----CC--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCc-eeeeeeecC---CCHHHHHHHH
Q 014285 143 TLNFALDEIARIL----PG--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNS-LSTAITIPA---VSPAEASELA 212 (427)
Q Consensus 143 ~~~~~~~~l~~~~----~g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~-ip~~~~i~~---~~~~~~~~~~ 212 (427)
+++.+|+.|++.. .| ...+++++||||||||++||.+|+|||+||||.+++ +|+|.+++. .+++++.+++
T Consensus 80 ~~~~~~~~l~~~~~~~~~g~~g~~~~A~said~AlwDl~gk~~g~Pv~~llGg~~~~~v~~y~s~~~~~~~~~~~~~~~a 159 (372)
T 3tj4_A 80 DHSRLWTKLARYPSLQWVGRAGITHLALAAVDVALWDIKAKKAGVPLWHYLGGARTAGVEAYNTDIGWLSFTLEDLLAGS 159 (372)
T ss_dssp CHHHHHHHHHTCHHHHTTCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSCEEEEECTTCCTTSCHHHHHHHH
T ss_pred hHHHHHHHHHHhhHhhcCCcccHHHHHHHHHHHHHHHHhccccCCcHHHHcCCCCCCCeEEEEecCCccCCCHHHHHHHH
Confidence 9999999997632 23 345689999999999999999999999999998655 999997322 3899999999
Q ss_pred HHHhhc-CCcEEEEeccC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh
Q 014285 213 SKYCKL-GFSTLKLNVGR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW 289 (427)
Q Consensus 213 ~~~~~~-Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~ 289 (427)
++++++ ||++||+|+|. ++++|++++++||+. ++++.|+||+|++|++++|+++++.|+++++ .|||||++++|+
T Consensus 160 ~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~d~ 237 (372)
T 3tj4_A 160 ARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDI--YWFEEPLWYDDV 237 (372)
T ss_dssp HHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCE--EEEESCSCTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCC--CEEECCCCchhH
Confidence 999999 99999999994 789999999999995 7999999999999999999999999999987 599999999999
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcc--cCchh
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDG--MIETR 366 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s--~~es~ 366 (427)
+++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+ +.++
T Consensus 238 ~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~g~~~~~- 312 (372)
T 3tj4_A 238 TSHARLAR----NTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHAGEMSQV- 312 (372)
T ss_dssp HHHHHHHH----HCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCCTTTTTT-
T ss_pred HHHHHHHh----hcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCchHHHH-
Confidence 99999986 68999999999999999999999999999999999997 9999999999999999999999 7664
Q ss_pred HHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 367 LATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 367 ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++|++++++|+.+.|++ |+ .++++.+++.++||++.+|++||||+|+|+++|
T Consensus 313 -----~~~l~aa~~~~~~~e~~-~~--~~~~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 364 (372)
T 3tj4_A 313 -----HVHLSYWHPASTILEYI-PW--IKDHFEEPIHVRDGVYKRPEQPGASTTPLAESF 364 (372)
T ss_dssp -----HHHHHHHCTTBCCEEEC-CS--SGGGBSSCCCEETTEECCCCSSBCSCCBCHHHH
T ss_pred -----HHHHhhhCCCCceeeec-hH--HHHhccCCCceeCCEEECCCCCCCCCcCCHHHH
Confidence 68999999999998877 42 356777888999999999999999999999865
No 34
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=100.00 E-value=9.3e-69 Score=543.47 Aligned_cols=344 Identities=19% Similarity=0.286 Sum_probs=310.2
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHH-HHHhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~-~~~~~~l~g~~~~ 142 (427)
.|||++|+++++++|+++||.++.++.+.++.++|+|+|++|++||||+.+.+. ........+ +.+.|.|+|+++.
T Consensus 27 ~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~td~G~~G~GE~~~~~~---~~~~~~~~~~~~l~p~liG~d~~ 103 (390)
T 3ugv_A 27 TLTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIETEEGVPGRAYLEPYVP---KAMKYLVPALHDMSDMLAGQPLA 103 (390)
T ss_dssp CCBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCCEEEEECCSCG---GGHHHHHHHHHHHHHHHTTSBCC
T ss_pred CCEEEEEEEEEEEecCCCCccCcccccccceEEEEEEEECCCCEEEEEeecCCC---chHHHHHHHHHHHHHHHCCCCcc
Confidence 399999999999999999999999999999999999999999999999987542 112222233 5689999999999
Q ss_pred CHHHHHHHHHHHC--CC--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC---CCHHHHHHHHHHH
Q 014285 143 TLNFALDEIARIL--PG--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA---VSPAEASELASKY 215 (427)
Q Consensus 143 ~~~~~~~~l~~~~--~g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~---~~~~~~~~~~~~~ 215 (427)
++ .+|+.|++.. .| ...+++++|||+|||||+||..|+|||+||||.++++|+|.+++. .+++++.++++++
T Consensus 104 ~~-~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pl~~LLGg~~~~v~~y~s~g~~~~~~~e~~~~~a~~~ 182 (390)
T 3ugv_A 104 PA-EIYDKTRKSLHFVGYAGLSMIAASGVDMAVWDALARAANMPLCTLLGGTPGSVKAYNSNGLWLKSPAEVAAEAVELK 182 (390)
T ss_dssp HH-HHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCCEEEEEECSCCCSSCHHHHHHHHHHHH
T ss_pred hH-HHHHHHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCceEEEEecccccCCCHHHHHHHHHHH
Confidence 99 9999998753 23 234689999999999999999999999999999999999998776 7899999999999
Q ss_pred hhc---CCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChh
Q 014285 216 CKL---GFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWS 290 (427)
Q Consensus 216 ~~~---Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~ 290 (427)
+++ ||++||+|+|. ++++|++++++||+ .++++.|+||+|++|++++|++++++|+++++ .|||||++++|++
T Consensus 183 ~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i--~~iEqP~~~~d~~ 260 (390)
T 3ugv_A 183 AEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGL--EWIEEPVVYDNFD 260 (390)
T ss_dssp HTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCC--SEEECCSCTTCHH
T ss_pred HHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCC--CEEECCCCcccHH
Confidence 999 99999999997 78999999999999 58999999999999999999999999999997 4999999999999
Q ss_pred hHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHH
Q 014285 291 GLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLAT 369 (427)
Q Consensus 291 ~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~ 369 (427)
++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++.+
T Consensus 261 ~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~~----- 331 (390)
T 3ugv_A 261 GYAQLRH----DLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHLYPE----- 331 (390)
T ss_dssp HHHHHHH----HCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBSCHH-----
T ss_pred HHHHHHH----hcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCHHH-----
Confidence 9999986 68999999999999999999999999999999999997 9999999999999999999999754
Q ss_pred HHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 370 GFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 370 ~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++|++++++|..++|+.. +.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 332 -a~lhl~aa~p~~~~~e~~~---~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 384 (390)
T 3ugv_A 332 -VGAHVMRVTETAHWLEWQS---WADPILQEPYALSDGDLIVPDKPGLGLDWDEDVV 384 (390)
T ss_dssp -HHHHHHTTCTTBCCEEECC---TTGGGBSSCCCEETTEEECCSSSBTCCCBCHHHH
T ss_pred -HHHHHHHhCCCCceeeccc---hhhhhccCCCeeECCEEECCCCCcCCCCcCHHHH
Confidence 5789999999998887652 3456777888999999999999999999999865
No 35
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=2.1e-68 Score=541.98 Aligned_cols=349 Identities=21% Similarity=0.332 Sum_probs=314.1
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHH-HHHHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTK-ALVKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~-~~~~~~~-~~~~l~g~~ 140 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+|++|.+||||+.+. |.|+++..+ ....+++ +.|.|+|++
T Consensus 20 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~p~l~G~d 99 (393)
T 1wuf_A 20 MYFQKARLIHAELPLLAPFKTSYGELKSKDFYIIELINEEGIHGYGELEAFPLPDYTEETLSSAILIIKEQLLPLLAQRK 99 (393)
T ss_dssp EECCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSSCEEEEEECCCSSTTSSSCCHHHHHHHHHHTTHHHHHHCE
T ss_pred CEEEEEEEEEEeeeccCCeEecceeEecCcEEEEEEEECCCCEEEEEeecCCCCcccCCCHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999875 456654433 3334554 789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCC-CHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV-SPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~-~~~~~~~~~~~~~~~G 219 (427)
+.+++.+|+.|.. +.|. +++++||||||||++||..|+|||+||||.++++|+|++++.. +++++.+++++++++|
T Consensus 100 ~~~~~~l~~~l~~-~~g~--~~a~~aid~AlwDl~gk~~g~Pl~~lLGg~~~~v~~~~~~g~~~~~e~~~~~a~~~~~~G 176 (393)
T 1wuf_A 100 IRKPEEIQELFSW-IQGN--EMAKAAVELAVWDAFAKMEKRSLAKMIGATKESIKVGVSIGLQQNVETLLQLVNQYVDQG 176 (393)
T ss_dssp ESSTTHHHHHHTT-SCSC--HHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCSEEEBCEEECCCSCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHH-ccCc--hHHHHHHHHHHHHHHHHHhCCcHHHHhCCCCCcceeeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 9999999988864 4443 6789999999999999999999999999988899999988764 6999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
|+++|+|+|. ++|++++++||+..|++.|+||||++|++++| ++++.|+++++ .|||||++++|++++++|++
T Consensus 177 ~~~~KiKvg~--~~d~~~v~avr~a~~~~~l~vDaN~~~~~~~a-~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~-- 249 (393)
T 1wuf_A 177 YERVKLKIAP--NKDIQFVEAVRKSFPKLSLMADANSAYNREDF-LLLKELDQYDL--EMIEQPFGTKDFVDHAWLQK-- 249 (393)
T ss_dssp CCEEEEECBT--TBSHHHHHHHHTTCTTSEEEEECTTCCCGGGH-HHHHTTGGGTC--SEEECCSCSSCSHHHHHHHT--
T ss_pred hHhheeccCh--HHHHHHHHHHHHHcCCCEEEEECCCCCCHHHH-HHHHHHHhCCC--eEEECCCCCcCHHHHHHHHH--
Confidence 9999999984 67999999999977999999999999999999 99999999987 49999999999999999985
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+|+.++++|++ +
T Consensus 250 --~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hla-a 326 (393)
T 1wuf_A 250 --QLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCGGMLEAGVGRAHNIALA-A 326 (393)
T ss_dssp --TCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHH-T
T ss_pred --hCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHHHHHHHHcCCeEEecCCcccHHHHHHHHHHH-h
Confidence 68999999999999999999999999999999999997 9999999999999999999999999999999999997 6
Q ss_pred cCCccee-ccCCCc-ccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 379 LGCIKYV-NLNTPF-LLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 379 l~~~~~~-e~~~p~-~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++.+. +++.+. ++.++++.+++.++||++.+|++||||+++|++.+
T Consensus 327 ~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 376 (393)
T 1wuf_A 327 RNEFVFPGDISASNRFFAEDIVTPAFELNQGRLKVPTNEGIGVTLDLKVL 376 (393)
T ss_dssp SSSCCSCBSCCCGGGTBSSCSBSSCCCCCSSEEECCCSSBTSCCBCHHHH
T ss_pred CCCCCcccccCchhhhhhhhcccCCcEEECCEEECCCCCcCCCccCHHHH
Confidence 8887664 565543 35677778888999999999999999999998865
No 36
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=100.00 E-value=6.7e-68 Score=534.68 Aligned_cols=351 Identities=17% Similarity=0.283 Sum_probs=316.0
Q ss_pred eeEEEEEEEEEEeeccc-cccccce-eEEeeeEEEEEEEEcCCceEEEEeecC-CCCCcchH-HHHHHHHHHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSA-PLSLGLS-SVENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQT-KALVKVREACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~-p~~~a~~-~~~~~~~vlV~v~t~~G~~G~GE~~~~-~~~s~~~~-~~~~~~~~~~~~l~g~~ 140 (427)
|||++++++.+++|++. ||.++.+ +.+.++.++|+|+|++|.+||||+.+. +.|+++.. .....+++++|.|+|++
T Consensus 4 MkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~i~~l~~~l~g~d 83 (371)
T 2ps2_A 4 LKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPFGSNYIASHPRGVRAGIATMAPSLIGLD 83 (371)
T ss_dssp CCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSCEEEEEECCSTTTSSSCCHHHHHHHHHHHHHHHTTSC
T ss_pred CEEEEEEEEEEecccCCCCeeecccceeccCceEEEEEEECCCCEEEEEEecCCcccCCCCHHHHHHHHHHHHHHHCCCC
Confidence 89999999999999999 9999877 578899999999999999999999987 66766433 33445567899999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+|+.|.+.+.+. +++++|||+||||++||..|+|||+||||. ++++|+|.+++..+++++.+.+++++++|
T Consensus 84 ~~~~~~~~~~l~~~~~~~--~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~vp~~~~~~~~~~~~~~~~a~~~~~~G 161 (371)
T 2ps2_A 84 PRRVDRINDAMDDALLGH--EDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLPLISSIYVGEPEDMRARVAKYRAKG 161 (371)
T ss_dssp TTCHHHHHHHHHHHCSSC--HHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCSSCEEBEEEECSCCHHHHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHhC
Confidence 999999999998765553 579999999999999999999999999995 78999999998889999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHh-hhCCCCCceEeCCCCCCChhhHHHHHH
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKL-NDMGVIPVLFEQPVHRDDWSGLHDVSN 297 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L-~~~~l~~~~iEqP~~~~d~~~~~~L~~ 297 (427)
|+++|+|+|.+++.|++++++||+ .++++.|+||+|++|++++|+++++.| +++++ |||||++ |++++++|++
T Consensus 162 f~~iKik~g~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i---~iE~P~~--~~~~~~~l~~ 236 (371)
T 2ps2_A 162 YKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF---ALEAPCA--TWRECISLRR 236 (371)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC---EEECCBS--SHHHHHHHHT
T ss_pred hheEEeecCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC---cCcCCcC--CHHHHHHHHh
Confidence 999999999999999999999999 578999999999999999999999999 99874 9999998 8999999985
Q ss_pred hhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHH
Q 014285 298 FARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLA 376 (427)
Q Consensus 298 ~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hla 376 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|+++||+|++++++|++
T Consensus 237 ----~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hla 312 (371)
T 2ps2_A 237 ----KTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETCGSDIAFAAIVHLA 312 (371)
T ss_dssp ----TCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHHHHH
T ss_pred ----hCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCCCcCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred hhcCCcce-eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 377 AGLGCIKY-VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 377 aal~~~~~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++|..+ .+++.+.++.++++.+++.++||++.+|++||||+++|+++|
T Consensus 313 a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 363 (371)
T 2ps2_A 313 QTIPERSLRCILECRDMVTVKTADGAFDIQDGFATAPTTPGLGIMPRLDVL 363 (371)
T ss_dssp TTSCTTTEEEECCGGGGBSCCCEECCCCCBTTEECCCCSSBTSCEECHHHH
T ss_pred HhCCCcccccccccchhhhccccCCCceEECCEEECCCCCCCCCeeCHHHH
Confidence 99998764 466666556677777788899999999999999999999875
No 37
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=100.00 E-value=4.3e-68 Score=538.84 Aligned_cols=338 Identities=21% Similarity=0.313 Sum_probs=297.8
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHH--HHHHHHhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKAL--VKVREACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~--~~~~~~~~~l~g~~~~ 142 (427)
|||++|+++.+++| ||.+ ++ ++.++|||+||+|++||||+. +. +..+.. ..++.+.|.|+|+++.
T Consensus 3 MkI~~i~~~~~~~p---~~~~----~~-~~~~~V~v~td~G~~G~GE~~--~~---~~~~~~~~~~~~~l~p~liG~d~~ 69 (393)
T 4dwd_A 3 LKIAKVEALSVAMG---DGTG----WM-PTSAFVRITAEDGTVGWGEAS--PM---LGGIASLGVVARDIAPFLEGQEVL 69 (393)
T ss_dssp CBEEEEEEEEEECC---C----------CEEEEEEEEETTSCEEEEEEC--CG---GGGHHHHHHHHHHTHHHHTTSBGG
T ss_pred CEEEEEEEEEEcCC---Cccc----cc-ceEEEEEEEECCCCEEEEEcc--Cc---HHHHHHHHHHHHHHHHHHCCCCcc
Confidence 89999999999998 6554 45 889999999999999999997 22 222222 1245689999999999
Q ss_pred CHHHHHHHHHHHCC--C--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee--c-CCCHHHHHHHH-H
Q 014285 143 TLNFALDEIARILP--G--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI--P-AVSPAEASELA-S 213 (427)
Q Consensus 143 ~~~~~~~~l~~~~~--g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i--~-~~~~~~~~~~~-~ 213 (427)
+++.+|+.|++... | ....++++|||||||||+||.+|+|||+||||. ++++|+|.++ + ..+++++.+++ +
T Consensus 70 ~~e~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGg~~r~~v~~y~s~~g~~~~~~e~~~~~a~~ 149 (393)
T 4dwd_A 70 DHAVLLDRMMHRLVKLGPEGIATAALAACDIALWDLKGKLLGQPIYKLLGGAWRTRLPCYSSIGGNAARSVDEVVREVAR 149 (393)
T ss_dssp GHHHHHHHHHHHTGGGCCTTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEEEEEECCCSSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCCCCCceeeEEecCccCCCCHHHHHHHHHH
Confidence 99999999987532 2 234589999999999999999999999999999 8999999996 2 46899999999 9
Q ss_pred HHhhcCCcEEEEeccC-------CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCC
Q 014285 214 KYCKLGFSTLKLNVGR-------NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVH 285 (427)
Q Consensus 214 ~~~~~Gf~~iKlKiG~-------~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~ 285 (427)
+++++||++||+|+|. ++++|++++++||+. ++++.|+||+|++|++++|+++++.|+++++ .|||||++
T Consensus 150 ~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i--~~iEqP~~ 227 (393)
T 4dwd_A 150 RVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGY--SWFEEPVQ 227 (393)
T ss_dssp HHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTC--SEEECCSC
T ss_pred HHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCC--CEEECCCC
Confidence 9999999999999997 789999999999995 8999999999999999999999999999997 49999999
Q ss_pred CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCc
Q 014285 286 RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIE 364 (427)
Q Consensus 286 ~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~e 364 (427)
++|++++++|++ ++++||++||++.+..+++++++.+ +|++|+|++++| ++++++++++|+++|+++++|++ +
T Consensus 228 ~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~-~ 301 (393)
T 4dwd_A 228 HYHVGAMGEVAQ----RLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT-Q 301 (393)
T ss_dssp TTCHHHHHHHHH----HCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC-C
T ss_pred cccHHHHHHHHh----hCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC-C
Confidence 999999999986 6899999999999999999999999 999999999997 99999999999999999999999 9
Q ss_pred hhHHHHHHHHHHhhcCCc----ceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 365 TRLATGFALHLAAGLGCI----KYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 365 s~ig~~a~~hlaaal~~~----~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
|+|+++|++|++++++|+ .++|. +....+++.+++.++||++.+|++||||+|+|+++|
T Consensus 302 ~~i~~aa~~hlaaa~p~~~~~~~~~e~---~~~~~~~~~~~~~~~~G~i~vp~~PGlGve~d~~~l 364 (393)
T 4dwd_A 302 PGVGHFANIHVLSTLMHMTKPVELADR---WDRGRPVFRNPAEPVDGHFALGDAPGLGIVVDEDEL 364 (393)
T ss_dssp SSHHHHHHHHHHHTCTTCCSCEEECTT---GGGGTTTBSSCCCCBTTEEECCCCSBTCCCBCHHHH
T ss_pred cHHHHHHHHHHHHhCCCcccccceeEe---ecCcccccCCCceeECCEEECCCCCcCCCccCHHHH
Confidence 999999999999999998 44452 222236777888899999999999999999999865
No 38
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=100.00 E-value=1.5e-67 Score=533.29 Aligned_cols=349 Identities=22% Similarity=0.308 Sum_probs=316.4
Q ss_pred eeEEEEEEEEEEeecccccccccee--EEeeeEEEEEEEEcCCceEEEEeecC-CCCCcchH-HHHHHHHHHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSS--VENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQT-KALVKVREACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~--~~~~~~vlV~v~t~~G~~G~GE~~~~-~~~s~~~~-~~~~~~~~~~~~l~g~~ 140 (427)
|||++++++.+++|++.||.++.++ ++.++.++|+|+|++|.+||||+.+. +.|+++.. .....++.++|.|+|++
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~l~~l~~~l~g~d 82 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGVTGWGEGCPWGHSYLPAHGPGLRAGIATLAPHLLGLD 82 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSCEEEEEECCSTTTSSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEEEEEEeccccCceecccCcccccccceEEEEEEECCCCEEEEEEecCCCCcCCCCHHHHHHHHHHHHHHHCCCC
Confidence 8999999999999999999999998 88999999999999999999999987 77776433 34445567899999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+|+.|...+.| .+++++||||||||++||..|+|||+||||. ++++|+|++++..+++++.+.+++++++|
T Consensus 83 ~~~~~~~~~~l~~~~~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~v~~~~~~~~~~~e~~~~~a~~~~~~G 160 (378)
T 2qdd_A 83 PRSLDHVNRVMDLQLPG--HSYVKSPIDMACWDILGQVAGLPLWQLLGGEAATPVPINSSISTGTPDQMLGLIAEAAAQG 160 (378)
T ss_dssp TTCHHHHHHHHHHHSCS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTTCSSCCCEEBEEEECSCCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHhhcc--chHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCCCceEEEecCCCHHHHHHHHHHHHHHh
Confidence 99999999999655655 4689999999999999999999999999997 78999999988889999999999999999
Q ss_pred CcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHH
Q 014285 220 FSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSN 297 (427)
Q Consensus 220 f~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~ 297 (427)
|+++|+|+|. +++.|++++++||+ .++++.|++|+|++|++++|+++++.|+ ++ + |||||++ |++++++|++
T Consensus 161 f~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~-~~--i-~iEqP~~--d~~~~~~l~~ 234 (378)
T 2qdd_A 161 YRTHSAKIGGSDPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVR-AR--D-WIEQPCQ--TLDQCAHVAR 234 (378)
T ss_dssp CCEEEEECCSSCHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCC-CC--C-EEECCSS--SHHHHHHHHT
T ss_pred hhheeecCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhC-CC--c-EEEcCCC--CHHHHHHHHH
Confidence 9999999997 88999999999999 5789999999999999999999999998 76 4 9999998 8999999985
Q ss_pred hhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHH
Q 014285 298 FARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLA 376 (427)
Q Consensus 298 ~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hla 376 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++||++||+||+++++|++
T Consensus 235 ----~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hla 310 (378)
T 2qdd_A 235 ----RVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIEDVGGTALADTAALHLA 310 (378)
T ss_dssp ----TCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHHHHH
T ss_pred ----hCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCcHHHHHHHHHHH
Confidence 68999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred hhcCCc--ce-eccCCCcccccCCCCC-ceeeeCcEEecCCCCCcccccCCCcCC
Q 014285 377 AGLGCI--KY-VNLNTPFLLSEDPFVG-GCEVSGAIYNFTNARGQGGFLKWTIVS 427 (427)
Q Consensus 377 aal~~~--~~-~e~~~p~~~~~~~~~~-~~~~~~G~i~~p~~pGlGve~d~~~v~ 427 (427)
++++|. .| .++ +| ++.++++.+ ++.++||++.+|++||||+++|++++.
T Consensus 311 aa~~~~~~~~~~d~-~~-~~~~d~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l~ 363 (378)
T 2qdd_A 311 ASTPEANRLASWLG-HA-HLADDPIPGQGARNRDGLATPPSAPGLGVIPDPEALG 363 (378)
T ss_dssp HTSCTTTBCCBCCG-GG-GBSCCSSTTCSCCCBTTEECCCCSSBTCCCCCGGGSC
T ss_pred HcCCCcceeccccc-cc-hhhhccccCCCceEECCEEECCCCCcCCCccCHHHHh
Confidence 999984 33 355 45 346788888 889999999999999999999999863
No 39
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=100.00 E-value=8.2e-68 Score=543.31 Aligned_cols=345 Identities=19% Similarity=0.268 Sum_probs=303.2
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEe-eeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVEN-VENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~-~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~ 142 (427)
.|||++|+++++++| ..|+.++.+.... ...++|+|+||+|++||||+.. .+. ....++.+.|.|+|+++.
T Consensus 27 ~mkIt~i~~~~v~~p-~~p~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g-----~~~--~~~~i~~l~p~LiG~d~~ 98 (445)
T 3vdg_A 27 RIRITGARVTPVAFA-DPPLLNTVGVHQPYALRAVIQLDTDAGLTGLGETYA-----DTV--HLERLQAAAHAIVGRSVF 98 (445)
T ss_dssp CCBEEEEEEEEEEEE-CCCBEETTEECCSEEEEEEEEEEETTSCEEEEEECC-----CHH--HHHHHHHHHHHHTTCBTT
T ss_pred CCEEEEEEEEEEecC-CccccccccccccceeEEEEEEEECCCCeEEEeCCC-----hHH--HHHHHHHHHHHhCCCChh
Confidence 499999999999999 8899998876543 5679999999999999999952 121 223356789999999999
Q ss_pred CHHHHHHHHHHHCC--------CC--------hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee-----
Q 014285 143 TLNFALDEIARILP--------GS--------EFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI----- 200 (427)
Q Consensus 143 ~~~~~~~~l~~~~~--------g~--------~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i----- 200 (427)
+++.+|+.|++.+. |. ...++++|||+|||||+||.+|+|||+||||. +++||+|.++
T Consensus 99 ~ie~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~~a~~~~~~~ 178 (445)
T 3vdg_A 99 STNVIRALISDALGGDRTGDGSGLAGMITSASVVDRVFSPFEVACLDVQGQVTGRPVSDLLGGAVRDAVPFSAYLFYKWA 178 (445)
T ss_dssp CHHHHHHHHHHHHTSCCCSCCTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTCCSSSEEEBCEEEECBCS
T ss_pred hHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCeEEEeeeeccccc
Confidence 99999999987632 11 34579999999999999999999999999997 7899996432
Q ss_pred -----------cCCCHHHHHHHHHHHhhc-CCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHH
Q 014285 201 -----------PAVSPAEASELASKYCKL-GFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVL 267 (427)
Q Consensus 201 -----------~~~~~~~~~~~~~~~~~~-Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l 267 (427)
...+++++.+++++++++ ||++||+|+|. ++++|++++++||+..|++.|+||||++|++++|++++
T Consensus 179 ~~~g~~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~d~~L~vDaN~~w~~~~Ai~~~ 258 (445)
T 3vdg_A 179 AHPGAEPDGWGAALDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAFPDHPLRLDPNAAWTPQTSVKVA 258 (445)
T ss_dssp SSTTSCCCSSCCBCSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHH
T ss_pred ccCCccccccccCCCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCHHHHHHHH
Confidence 126899999999998875 99999999996 78999999999999669999999999999999999999
Q ss_pred HHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHH
Q 014285 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQI 346 (427)
Q Consensus 268 ~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~ 346 (427)
++|+++ + .|||||++ +++++++|++ ++++|||+||++.+..+++++++.+++|++|+|++++| +++++++
T Consensus 259 ~~L~~~-l--~~iEeP~~--~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea~ki 329 (445)
T 3vdg_A 259 AGLEGV-L--EYLEDPTP--GLDGMAEVAA----QAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRSRLL 329 (445)
T ss_dssp HHTTTT-C--SEEECCSS--SHHHHHHHHH----HCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHhhH-H--HeeeCCCC--CHHHHHHHHh----cCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHHHHH
Confidence 999998 7 59999996 7999999986 68999999999999999999999999999999999997 9999999
Q ss_pred HHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCccee-ccCCCcccccCCC-CCceeeeCcEEecCCCCCcccccCCC
Q 014285 347 IKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYV-NLNTPFLLSEDPF-VGGCEVSGAIYNFTNARGQGGFLKWT 424 (427)
Q Consensus 347 ~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~-e~~~p~~~~~~~~-~~~~~~~~G~i~~p~~pGlGve~d~~ 424 (427)
+++|+++|+++++|++.|++|+++|++|++++++|..+. +.+.|+.. ++.+ .+++.++||++.+|++||||||+|++
T Consensus 330 a~lA~~~gv~v~~h~~~e~~i~~aa~~hlaaa~p~~~~~~d~~~~~~~-~d~~~~~~~~~~~G~i~~p~~PGLGveld~~ 408 (445)
T 3vdg_A 330 AGICDTFGLGLSMHSNSHLGISLAAMVHLAAATPNLTYACDTHWPWRH-EDVVAPGALNFCDGEVQVPATPGLGVEIDED 408 (445)
T ss_dssp HHHHHHHTCEEEECCCSCCHHHHHHHHHHHHTCTTCCSCBCCCGGGCC-CCSBCSSSSCEETTEEECCCSSBTSCCBCHH
T ss_pred HHHHHHcCCEEEEeCCcchHHHHHHHHHHHHhCCCcceeeccccchhh-cccccCCCceEECCEEECCCCCcCCCcCCHH
Confidence 999999999999999999999999999999999998765 44446544 3444 56889999999999999999999998
Q ss_pred cC
Q 014285 425 IV 426 (427)
Q Consensus 425 ~v 426 (427)
+|
T Consensus 409 ~l 410 (445)
T 3vdg_A 409 AL 410 (445)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 40
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=100.00 E-value=2.9e-68 Score=539.86 Aligned_cols=349 Identities=19% Similarity=0.218 Sum_probs=293.0
Q ss_pred ceeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHH-HHHhhHhcCCCC
Q 014285 63 FWVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPP 141 (427)
Q Consensus 63 ~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~-~~~~~~l~g~~~ 141 (427)
..|||++|+++++++||++||+++.++++.++.++|||+||+|++||||+.+... +. ......+ +.+.|.|+|+++
T Consensus 18 ~~MkIt~Ie~~~~~~Pl~~p~~~s~g~~~~~~~vlV~i~td~G~~G~Ge~~~~~~-~~--~~~~~~i~~~lap~LiG~dp 94 (388)
T 4h83_A 18 HGLTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGDEHE-TM--FDIDRIIHEELAPTLIGQDA 94 (388)
T ss_dssp --CBEEEEEEEEEEEEC----------CCEEEEEEEEEEETTSCEEEEEECCCCT-TH--HHHHHHHHHTTHHHHTTSBT
T ss_pred CCCEEEEEEEEEEEeeccCCEECCCEEEEEEEEEEEEEEECCCCEEEEEecCCcc-cH--HHHHHHHHHHHHHHHcCCCh
Confidence 3599999999999999999999999999999999999999999999999975421 11 1222233 347899999999
Q ss_pred CCHHHHHHHHHHHCC----C-ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC--CCHHHHHHHHHH
Q 014285 142 TTLNFALDEIARILP----G-SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA--VSPAEASELASK 214 (427)
Q Consensus 142 ~~~~~~~~~l~~~~~----g-~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~--~~~~~~~~~~~~ 214 (427)
.+++.+|+.|++... + ...++|++||||||||++||..|+|||+||||.++++|+|.+... .+++++.+.+++
T Consensus 95 ~~ie~l~~~~~~~~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pl~~LLGg~~~~~~~y~~~~~~~~~~~~~~~~~~~ 174 (388)
T 4h83_A 95 MAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIAIGGYYGEPLGSIADEMHN 174 (388)
T ss_dssp TCHHHHHHHHGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSCSEEEEEEEECCTTCTTCSHHHHHHH
T ss_pred hHHHHHHHHHHhhhhhhccCCchhHHHHHHHHHHHHHHHHHHcCCChhhhcCCCcCceEEEeeccccCCCHHHHHHHHHH
Confidence 999999999986421 1 234678999999999999999999999999999999999887543 245778888999
Q ss_pred HhhcCCcEEEEecc-CCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCC-CChhh
Q 014285 215 YCKLGFSTLKLNVG-RNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHR-DDWSG 291 (427)
Q Consensus 215 ~~~~Gf~~iKlKiG-~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~-~d~~~ 291 (427)
++++||+++|+|+| .++++|++++++||+ +++++.||||||++|++++|+++++.|+++++ .|||||+++ +|+++
T Consensus 175 ~~~~G~~~~Kikvg~~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~--~~iEeP~~~~~d~~~ 252 (388)
T 4h83_A 175 YQELGLAGVKFKVGGLSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVDLSRRIADLNI--RWFEEPVEWHNDKRS 252 (388)
T ss_dssp HHHHTBSEEEEECSSSCHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHTTTSCC--CCEESCBCSTTHHHH
T ss_pred HHHcCCceEeecCCCCCHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHHHHHHHhhhcCc--ceeecCcccccchHH
Confidence 99999999999996 489999999999999 58999999999999999999999999999997 499999986 56889
Q ss_pred HHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHH
Q 014285 292 LHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATG 370 (427)
Q Consensus 292 ~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~ 370 (427)
+++|++ ++++|||+||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++.+|+ ++ +
T Consensus 253 ~~~l~~----~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~gv~v~~h~--~~----~ 322 (388)
T 4h83_A 253 MRDVRY----QGSVPVCAGQTEFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMGHHE--EP----Q 322 (388)
T ss_dssp HHHHHH----HSSSCEEECTTCSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTTCEECCCS--CH----H
T ss_pred HHHHHh----hcCCCccCCccccChHhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHCCCEEEecC--HH----H
Confidence 999986 78999999999999999999999999999999999997 9999999999999999887765 44 4
Q ss_pred HHHHHHhhcCCcceeccCCCc--ccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 371 FALHLAAGLGCIKYVNLNTPF--LLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 371 a~~hlaaal~~~~~~e~~~p~--~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++|++++++|+.+.|...+. .+..+++.+++.++||++.+|++||||||+|+|+|
T Consensus 323 ~~~h~~aa~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGLGve~d~d~l 380 (388)
T 4h83_A 323 VSTHLLASQPHGTIAECFHPDRDPFWWNMITNRPKLNNGTLTLSDRPGLGWDLNWDYI 380 (388)
T ss_dssp HHHHHHHHSTTBCCEEEECTTTCHHHHHSBTTCCCCBTBEEECCSCSBTCCCBCHHHH
T ss_pred HHHHHHHHhhcCcceeecCcccchhhhhccCCCCeeECCEEECCCCCCCCeeeCHHHH
Confidence 578999999998887754332 23456778888999999999999999999999876
No 41
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=100.00 E-value=1e-67 Score=542.41 Aligned_cols=345 Identities=19% Similarity=0.252 Sum_probs=304.5
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEe-eeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVEN-VENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~-~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~ 143 (427)
|||++|+++++++| ..|+.++.+.... ...++|+|+||+|++||||+... + .....++.+.|.|+|+++.+
T Consensus 23 mkI~~i~~~~v~~P-~~~~~~~~g~~~~~~~~~~V~v~td~G~~G~GE~~g~-----~--~v~~~i~~l~p~LiG~d~~~ 94 (441)
T 3vc5_A 23 MLIREVRVTPVAFR-DPPLLNAAGVHQPWALRTIVEVVTDEGITGLGETYGD-----L--AHLEQVRAAAARLPGLDVYA 94 (441)
T ss_dssp CBEEEEEEEEEEEE-CCCBEETTEECCSEEEEEEEEEEETTCCEEEEEEECC-----H--HHHHHHHHHHHTCTTSBTTC
T ss_pred cEEEEEEEEEEecC-CcccccccCccccceeEEEEEEEECCCCEEEEeCCCh-----H--HHHHHHHHHHHHhCCCChhH
Confidence 89999999999999 8999999876543 56799999999999999999631 1 12233567899999999999
Q ss_pred HHHHHHHHHHHCC--------CC--------hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee------
Q 014285 144 LNFALDEIARILP--------GS--------EFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI------ 200 (427)
Q Consensus 144 ~~~~~~~l~~~~~--------g~--------~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i------ 200 (427)
++.+|+.|++.+. |. ...++++|||+|||||+||.+|+|||+||||. +++||+|.++
T Consensus 95 ~e~i~~~l~~~~~~~~~~~~~g~~G~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG~~rd~v~~~a~~~~~~~~ 174 (441)
T 3vc5_A 95 LHRIYRRVADVVGANIVTDMHGLTGSSSRVKTVDRVFAAFEVACLDIQGKAAGRPVADLLGGKVRDAVPYSAYLFYKWAG 174 (441)
T ss_dssp HHHHHHHHHHHHTTCCCCCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSEEEBCEEEECBCSB
T ss_pred HHHHHHHHHHhhhccccccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCeEEEEEeecccccc
Confidence 9999999987532 11 23479999999999999999999999999997 7899996432
Q ss_pred ----------cCCCHHHHHHHHHHHhh-cCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHH
Q 014285 201 ----------PAVSPAEASELASKYCK-LGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLG 268 (427)
Q Consensus 201 ----------~~~~~~~~~~~~~~~~~-~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~ 268 (427)
...+++++.++++++++ +||++||+|+|. ++++|++++++||+..|++.|+||||++|++++|+++++
T Consensus 175 ~~g~~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai~~~~ 254 (441)
T 3vc5_A 175 HPGKPEDRFGPALDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPGLPLRLDPNAAWTVETSIRVGR 254 (441)
T ss_dssp CTTSCBCTTCCBCSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTCSCHHHHHHHHH
T ss_pred CCCccccccccCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeccCCCCCCHHHHHHHHH
Confidence 12689999999999887 499999999996 789999999999996699999999999999999999999
Q ss_pred HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHH
Q 014285 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQII 347 (427)
Q Consensus 269 ~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~ 347 (427)
+|+++ + .|||||++ ++++|++|++ ++++|||+||++.+..+++++++.+++|++|+|++++| ++++++++
T Consensus 255 ~L~~~-l--~~iEeP~~--~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea~kia 325 (441)
T 3vc5_A 255 ALDGV-L--EYLEDPTP--GIDGMARVAA----EVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRSAHIA 325 (441)
T ss_dssp HTTTT-C--SEEECCSS--SHHHHHHHHT----TSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHHHHHH
T ss_pred HHHHH-H--HHhhccCC--CHHHHHHHHh----cCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHHHHHH
Confidence 99998 7 59999996 7999999985 78999999999999999999999999999999999997 99999999
Q ss_pred HHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCccee-ccCCCcccccCCC-CCceeeeCcEEecCCCCCcccccCCCc
Q 014285 348 KATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYV-NLNTPFLLSEDPF-VGGCEVSGAIYNFTNARGQGGFLKWTI 425 (427)
Q Consensus 348 ~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~-e~~~p~~~~~~~~-~~~~~~~~G~i~~p~~pGlGve~d~~~ 425 (427)
++|+++|+++++|++.|++|+++|++|++++++|..+. +++.|+...+|++ .+++.++||++.+|++||||||+|+++
T Consensus 326 ~lA~~~gv~v~~h~~~e~~i~~aa~~hlaaa~p~~~~~~d~~~~~~~~~d~~~~~~~~~~~G~i~~p~~PGLGveld~~~ 405 (441)
T 3vc5_A 326 TLCATFGIELSMHSNSHLGISLAAMTHLAAATPAITHACDTHTPWQDGQDVVAPGALRFVDGAVPVPDGPGLGVELDRDA 405 (441)
T ss_dssp HHHHHTTCEEEECCCSCCHHHHHHHHHHHHTCTTBCSCBCCCGGGGTTCCSBCTTSCCCBTTEEECCCSSBTSCCBCHHH
T ss_pred HHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCcceeecccchhhcccccccCCCceEECCEEECCCCCCCCceECHHH
Confidence 99999999999999999999999999999999998775 5555665545665 457899999999999999999999987
Q ss_pred C
Q 014285 426 V 426 (427)
Q Consensus 426 v 426 (427)
|
T Consensus 406 l 406 (441)
T 3vc5_A 406 L 406 (441)
T ss_dssp H
T ss_pred H
Confidence 5
No 42
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=100.00 E-value=2.2e-68 Score=544.50 Aligned_cols=351 Identities=19% Similarity=0.282 Sum_probs=299.8
Q ss_pred eeEEEEEEEEEEeecccccccccee-----------------E--EeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSS-----------------V--ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKA 125 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~-----------------~--~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~ 125 (427)
.||++|+++.+.+|+.+|+..+.+. . .....++|||+||+|++||||+.+.. ++. ..
T Consensus 26 ~~I~~i~~~~v~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~r~VlVri~td~G~~G~GE~~~~~--~~~--~~ 101 (412)
T 4h1z_A 26 DRVKKIESFTLTLPRETPYLGKPRPGEEPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAVGWGETYGLV--APR--AT 101 (412)
T ss_dssp CCEEEEEEEEEECC------------CCCCTTSEEECTTTCCEEESSCEEEEEEEEETTCCEEEEEEECSS--CHH--HH
T ss_pred ceeeEEEEEEEecccCCccccccccccccccccceeeccCcccCCCCCCcEEEEEEECCCCEEEEecCCCC--CHH--HH
Confidence 4899999999999999998643221 1 12356999999999999999997542 121 12
Q ss_pred HHHHHH-HhhHhcCCCCCCHHHHHHHHHHHC-----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeee
Q 014285 126 LVKVRE-ACQFLRQSPPTTLNFALDEIARIL-----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAI 198 (427)
Q Consensus 126 ~~~~~~-~~~~l~g~~~~~~~~~~~~l~~~~-----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~ 198 (427)
...+++ +.|.|+|++|.+++.+|+.|++.. .+....+|++|||+|||||+||..|+|||+||||. ++++|+|.
T Consensus 102 ~~~i~~~lap~liG~dp~~~~~i~~~l~~~~~~~~~~~g~~~~A~saiD~ALwDl~gK~~g~Pl~~LLGG~~~~~v~~y~ 181 (412)
T 4h1z_A 102 MEIIDDLLADFTIGRDPFDAAAIHDDLYDLMRVRGYTGGFYVDALAAIDIALWDLAGKLAGLPVCKLLGGQRRDRIAAYI 181 (412)
T ss_dssp HHHHHHTHHHHHTTSCGGGHHHHHHHHHTTTGGGTCCSHHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTCCCCSEEEEEE
T ss_pred HHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHcCCCHHHhcCCCCCceEEEEe
Confidence 223344 789999999999999999998643 22334678999999999999999999999999998 57899998
Q ss_pred ee-cCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 199 TI-PAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 199 ~i-~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
+. +.++++++.+.+++++++||+.+|+|+|.+.+.|+++++++|+ ++|+++||||||++|++++|++++++|+++++
T Consensus 182 s~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~l- 260 (412)
T 4h1z_A 182 SGLPEDTRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEMEILRERLGPAVRIACDMHWAHTASEAVALIKAMEPHGL- 260 (412)
T ss_dssp CCCCCSSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHHHHHHHHHCSSSEEEEECCSCCCHHHHHHHHHHHGGGCE-
T ss_pred ccCCCCcHHHHHHHHHHHHhcCcceeccccccchhhHHHHHHHHHhccCCeEEEEeccccCCCHHHHHHHHHhhccccc-
Confidence 74 4457888889999999999999999999888889999999999 58999999999999999999999999999997
Q ss_pred CceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCC
Q 014285 277 PVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGL 355 (427)
Q Consensus 277 ~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi 355 (427)
.|||||++++|++++++|++ ++++|||+||++.+..+++++++.+++|++|+|+++ | ++++++++++|+++|+
T Consensus 261 -~~iEqP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~-GGit~~~kia~~A~~~gi 334 (412)
T 4h1z_A 261 -WFAEAPVRTEDIDGLARVAA----SVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMGH-KGITQFMRIGAYAHVHHI 334 (412)
T ss_dssp -EEEECCSCTTCHHHHHHHHH----HCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHHH-HHHHHHHHHHHHHHHTTC
T ss_pred -ceecCCCCccchHHHHHHHh----hcCCccccCCcccchHhHHHHHHcCCCCEEEecCCC-CChHHHHHHHHHHHHCCC
Confidence 59999999999999999986 789999999999999999999999999999999976 6 9999999999999999
Q ss_pred cEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCc-ccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 356 HLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPF-LLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 356 ~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~-~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++|++++++|+++|++|++++++|..+.|++.+. ...++++.+++.++||++.+|++||||||+|+|++
T Consensus 335 ~v~~h~~~~~~i~~aa~lhl~aa~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~i~vp~~PGLGve~d~eal 406 (412)
T 4h1z_A 335 KVIPHATIGAGIFLAASLQASAALANVDCHEFQHSIFEPNRRLLVGDMDCLNGEYVVPTGPGLGVEPSKEAQ 406 (412)
T ss_dssp EECCCCCSSCSHHHHHHHHHHHHCTTBCCEEECHHHHTGGGGGEEECCEEETTEEECCCSSBTSEEECHHHH
T ss_pred cEEecCCcchHHHHHHHHHHHHhCCCCCeeeccccccccchhhccCCCeEECCEEECCCCCCCCeEECHHHH
Confidence 999999999999999999999999999888876432 34456777888999999999999999999999875
No 43
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=100.00 E-value=1.9e-67 Score=537.23 Aligned_cols=344 Identities=16% Similarity=0.203 Sum_probs=301.7
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~~ 143 (427)
|||++|+++.+++|+ | . ++.++.++|||+||+|++||||+.+.+ ++++. ....+++ +.|.|+|+++.+
T Consensus 1 MkIt~i~~~~v~~pl--p-~-----~~~~~~~~V~v~td~G~~G~GE~~~~~-~~~~~--~~~~i~~~l~p~LiG~dp~~ 69 (412)
T 4e4u_A 1 MKIVSLETHIVAVPP--P-H-----VGGMYWIFVKLKTDDGIEGVGEIYSAT-FGPKA--MAPIIDDVFERHLLNRDPHH 69 (412)
T ss_dssp CCEEEEEEEEEECCT--T-C-----TTCSEEEEEEEEETTSCEEEEEECCCS-SCHHH--HHHHHHHHHHHHTTTSCTTC
T ss_pred CEEEEEEEEEEccCC--C-c-----cCCCceEEEEEEECCCCEEEEeecCCC-CCHHH--HHHHHHHHhHHHhCCCChhH
Confidence 899999999999998 4 1 234678999999999999999996432 22222 2223444 679999999999
Q ss_pred HHHHHHHHHHHC---CCC-hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeec---------CCCHHHHH
Q 014285 144 LNFALDEIARIL---PGS-EFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIP---------AVSPAEAS 209 (427)
Q Consensus 144 ~~~~~~~l~~~~---~g~-~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~---------~~~~~~~~ 209 (427)
++.+|+.|++.. .+. ..+++++|||||||||+||.+|+|||+||||. +++||+|.+++ ..+++++.
T Consensus 70 ~e~~~~~l~~~~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~yas~~~~~~~~~~~~~~~e~~~ 149 (412)
T 4e4u_A 70 VERLFRQAYSSGFTQRPDLTMMGVVSGLEMACWDIIGKAAAKPVYELLGGRIHERLRSYTYLYPKNAKGEYDYDDPDLAA 149 (412)
T ss_dssp HHHHHHHHHHTTTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTCCCCSSEEEEEECCCBCTTSCBCSSCHHHHH
T ss_pred HHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHhHhHcCCcHHHHcCCCcCCeeEEEEeccCCcccccccCCCHHHHH
Confidence 999999997642 111 23679999999999999999999999999995 88999998653 46899999
Q ss_pred HHHHHHhhcCCcEEEEeccCC-------------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 210 ELASKYCKLGFSTLKLNVGRN-------------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 210 ~~~~~~~~~Gf~~iKlKiG~~-------------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
+++++++++||++||+|+|.+ +++|++++++||+ .++++.|+||+|++|++++|++++++|+++++
T Consensus 150 ~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i 229 (412)
T 4e4u_A 150 ECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLEKYDP 229 (412)
T ss_dssp HHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhhhcCC
Confidence 999999999999999999853 6889999999999 58999999999999999999999999999997
Q ss_pred CCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcC
Q 014285 276 IPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSG 354 (427)
Q Consensus 276 ~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~g 354 (427)
.|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|
T Consensus 230 --~~iEeP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~~g 303 (412)
T 4e4u_A 230 --LWFEEPVPPGQEEAIAQVAK----HTSIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEVHY 303 (412)
T ss_dssp --SEEECCSCSSCHHHHHHHHH----TCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHHTT
T ss_pred --cEEECCCChhhHHHHHHHHh----hCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcC
Confidence 49999999999999999986 78999999999999999999999999999999999997 999999999999999
Q ss_pred CcEEEcccCchhHHHHHHHHHHhhcCCcceecc-CCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 355 LHLMIDGMIETRLATGFALHLAAGLGCIKYVNL-NTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 355 i~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~-~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|++ +|+|+++|++|++++++|+.+.|. +.+..+.++++.+++.++||++.+|++||||+|+|++++
T Consensus 304 i~v~~h~~-~s~i~~aa~~hlaaa~pn~~~~e~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 375 (412)
T 4e4u_A 304 AQIAPHLY-NGPVGAAASIQLATCTPNFLIQESIMTWGGFHAEVVKTPIRWEDGYIIPSNEPGLGIELDMDVV 375 (412)
T ss_dssp CEECCCCC-SCHHHHHHHHHHHHTCTTBCCEEESTTSCHHHHHTBSSCCEEETTEEECCCSSBTSCCBCHHHH
T ss_pred CEEEecCC-CcHHHHHHHHHHHHhCCCceeeeecCccchhhHhhccCCCeeECCEEECCCCCCCCccCCHHHH
Confidence 99999975 799999999999999999988873 333344567888889999999999999999999999865
No 44
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=100.00 E-value=5.4e-68 Score=535.55 Aligned_cols=344 Identities=16% Similarity=0.218 Sum_probs=300.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH---------HhhH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE---------ACQF 135 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~---------~~~~ 135 (427)
|||++|+++.+++|++.+. ++++.++ ++|+|+|++|++||||+.. +.+ .....+++ +.|.
T Consensus 3 MkI~~i~~~~~~~P~~~~~----~~~~~~~-~~V~v~td~G~~G~GE~~~----~~~--~~~~~i~~~~~~~~~~~l~p~ 71 (374)
T 3sjn_A 3 LKITDIEVLHLRVPAMDAD----CEWGEDA-VIVKVHTDKGIVGVGEADS----SPL--VVQACIEAPQTNFYCNGLKRL 71 (374)
T ss_dssp CBEEEEEEEEEESSCTTSC----CCTTSEE-EEEEEEETTSCEEEEEESS----CHH--HHHHHHHCCCSBTTBCCHHHH
T ss_pred cEEEEEEEEEEeccCcCCc----CcccceE-EEEEEEECCCCEEEEcCCC----ChH--HHHHHHHhhhccchHhHHHHH
Confidence 8999999999998877663 2233445 8999999999999999421 111 12223444 8899
Q ss_pred hcCCCCCCHHHHHHHHHHHCCC----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCC-CCCceeeeeeec-CCCHHHHH
Q 014285 136 LRQSPPTTLNFALDEIARILPG----SEFASVRAGVEMALIDAVANSIDIPLWRLFGG-ASNSLSTAITIP-AVSPAEAS 209 (427)
Q Consensus 136 l~g~~~~~~~~~~~~l~~~~~g----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg-~~~~ip~~~~i~-~~~~~~~~ 209 (427)
|+|+++.+++.+|+.|++...+ ....++++|||||||||+||.+|+|||+|||| .++++|+|.... ..+++++.
T Consensus 72 liG~d~~~~~~~~~~l~~~~~~~~~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGg~~r~~v~~y~~~~~~~~~e~~~ 151 (374)
T 3sjn_A 72 LIGENALEIERLWNKMYWGSNYMGRRGAGIHAISAIDIALWDIAGQFYGVPVHTLLGGKYRDKIRCYGTFIPADKPEDNV 151 (374)
T ss_dssp HTTSBTTCHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEEEEEECCCSSGGGGH
T ss_pred HcCCCcccHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcCCCcCCceeEEeccCCCCCHHHHH
Confidence 9999999999999999875432 23457999999999999999999999999999 589999993322 12348899
Q ss_pred HHHHHHhhcCCcEEEEecc---CCchhhHHHHHHHHHh-CCCcEEEEeCCCCCC-HHHHHHHHHHhhhCCCCCceEeCCC
Q 014285 210 ELASKYCKLGFSTLKLNVG---RNITADFDVLQAIHAV-HPHCSFILDANEGYT-SEEAVEVLGKLNDMGVIPVLFEQPV 284 (427)
Q Consensus 210 ~~~~~~~~~Gf~~iKlKiG---~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s-~~~A~~~l~~L~~~~l~~~~iEqP~ 284 (427)
+.+++++++||++||+|+| .++++|++++++||+. ++++.|+||+|++|+ +++|+++++.|+++++ .|||||+
T Consensus 152 ~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i--~~iEqP~ 229 (374)
T 3sjn_A 152 AIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNL--NWIEEPV 229 (374)
T ss_dssp HHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCC--SEEECSS
T ss_pred HHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCc--eEEECCC
Confidence 9999999999999999999 4689999999999994 899999999999999 9999999999999997 4999999
Q ss_pred CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC
Q 014285 285 HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 285 ~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
+++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++
T Consensus 230 ~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~- 304 (374)
T 3sjn_A 230 LADSLISYEKLSR----QVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF- 304 (374)
T ss_dssp CTTCHHHHHHHHH----HCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC-
T ss_pred CcccHHHHHHHHh----hCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC-
Confidence 9999999999986 68999999999999999999999999999999999997 99999999999999999999998
Q ss_pred chhHHHHHHHHHHhhcCCcceeccCC-CcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 364 ETRLATGFALHLAAGLGCIKYVNLNT-PFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 364 es~ig~~a~~hlaaal~~~~~~e~~~-p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|+|++++++|++++++|..+.|+.. +..+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 305 ~~~i~~aa~~hlaaa~~~~~~~e~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 368 (374)
T 3sjn_A 305 STGILLHASVHFLAACEQGTLMEFSQSSSPLFTSLVKNQLQFDNGFVAVSDAPGLGIELDEELI 368 (374)
T ss_dssp SCHHHHHHHHHHHHTCTTCCEEEEECCCCHHHHHSBTTCCCEETTEEECCCSSBTCCCBCHHHH
T ss_pred CcHHHHHHHHHHHHhCCCCcEEEecCCcchhhhhhccCCCeeeCcEEECCCCCCCCCCcCHHHH
Confidence 89999999999999999998887653 3344677888889999999999999999999999875
No 45
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=100.00 E-value=9.2e-67 Score=527.78 Aligned_cols=350 Identities=16% Similarity=0.242 Sum_probs=317.6
Q ss_pred eeEEEEEEEEEEeeccc-ccccccee-EEeeeEEEEEEEEcCCceEEEEeecC-CCCCcch-HHHHHHHHHHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSA-PLSLGLSS-VENVENVAIRVELSNGCVGWGEVAVV-PLVTGDQ-TKALVKVREACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~-p~~~a~~~-~~~~~~vlV~v~t~~G~~G~GE~~~~-~~~s~~~-~~~~~~~~~~~~~l~g~~ 140 (427)
|||++++++.+++|++. ||.++.++ .+.++.++|+|+|++|.+||||+.+. +.|+++. ......++.++|.|+|++
T Consensus 3 mkI~~i~~~~~~~pl~~~p~~~s~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~~~~~~~~~i~~l~~~l~g~d 82 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGEFTPCGENYMIAHSEGVDAFARLAAPQLLGQD 82 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSCEEEEEEBCSSTTSSSCCTTHHHHHHHHHHHHHTTSC
T ss_pred CEEEEEEEEEEeeecCCCCcEecCceeecccceEEEEEEECCCCEEEEEeecCCCCcCCCCHHHHHHHHHHHHHHHcCCC
Confidence 89999999999999999 99999998 78899999999999999999999987 6676643 233444567899999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+|+.|.....| .+++++||||||||++||..|+|||+||||. ++++|+|++++..+++++.+.+++++++|
T Consensus 83 ~~~~~~~~~~l~~~~~g--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~v~~~~~~~~~~~~~~~~~a~~~~~~G 160 (379)
T 2rdx_A 83 PRQVARMERLMDHLVQG--HGYAKAPFDAAFWDILGQATGQPVWMLLGGKLCDGAPMYRVAPQRSEAETRAELARHRAAG 160 (379)
T ss_dssp TTCHHHHHHHHHHHSSS--CHHHHHHHHHHHHHHHHHHHTCBHHHHTTSCCCSSEEBCEECCCSCSHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhHHHhCCCHHHHcCCCCCCceeEEEEecCCCHHHHHHHHHHHHHcC
Confidence 99999999999655555 4689999999999999999999999999997 78999999988889999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHh
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNF 298 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~ 298 (427)
|+.+|+|+|.+++.|++++++||+. ++++.|+||+|++|++++|+++++.|++++ + |||||++ |++++++|++
T Consensus 161 f~~iKik~g~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~--i-~iE~P~~--~~~~~~~l~~- 234 (379)
T 2rdx_A 161 YRQFQIKVGADWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLD--Y-ILEQPCR--SYEECQQVRR- 234 (379)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSC--C-EEECCSS--SHHHHHHHHT-
T ss_pred CCEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCC--e-EEeCCcC--CHHHHHHHHh-
Confidence 9999999998899999999999995 789999999999999999999999999997 4 9999998 8999999985
Q ss_pred hccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHh
Q 014285 299 ARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377 (427)
Q Consensus 299 ~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaa 377 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++||++||++++++++|+++
T Consensus 235 ---~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~~a~~~laa 311 (379)
T 2rdx_A 235 ---VADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAEDSWGGEIASAAVAHFAA 311 (379)
T ss_dssp ---TCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEECSBCSHHHHHHHHHHHH
T ss_pred ---hCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEeeccCcHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999997 99999999999999999999999999999999999999
Q ss_pred hcCCccee-ccC-CCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 378 GLGCIKYV-NLN-TPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 378 al~~~~~~-e~~-~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++.+. ..+ .| ++.++++.+++.++||++.+|++||||+++|++++
T Consensus 312 a~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 361 (379)
T 2rdx_A 312 STPEEFLINSTDLMN-YNTRSTGLGGPTVHQGRLYASDTPGLGVTPDFNSL 361 (379)
T ss_dssp TSCTTTEEEECCGGG-GBSSCSEEECCEEETTEEECCCSSBTSEEECHHHH
T ss_pred cCCCccccccccccc-hhhhccccCCceEECCEEEcCCCCcCCeeeCHHHH
Confidence 99986543 222 44 33677777788999999999999999999999865
No 46
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=100.00 E-value=1.1e-67 Score=541.68 Aligned_cols=343 Identities=15% Similarity=0.254 Sum_probs=303.9
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~~ 143 (427)
|||++|+++.++.|++ .+ ..++.++|||+||+|++|||||++.+. ..+ .....+++ +.|.|+|+++.+
T Consensus 2 MkIt~i~~~~~~~p~~---~~-----~~~~~v~V~v~Td~G~~G~GE~~~~~~-~~~--~v~~~i~~~l~p~LiG~dp~~ 70 (433)
T 3rcy_A 2 VKLRDLDIIVTAPPAP---GW-----GGRYWILVKLTTDDGITGWGECYAASV-GPE--AMRAVIEDVFARHMEGENPEN 70 (433)
T ss_dssp CCEEEEEEEEECCCTT---CT-----TCSCEEEEEEEETTSCEEEEEECCCSS-CHH--HHHHHHHHHHHHHTTTSCTTC
T ss_pred CeEEEEEEEEEcCCCC---cc-----CCceEEEEEEEECCCCEEEEeccCCCC-CHH--HHHHHHHHHHHHHhCCCCccc
Confidence 8999999999999874 11 236889999999999999999876543 211 12223454 889999999999
Q ss_pred HHHHHHHHHHHC--CC-C-hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee---c-------CCCHHHH
Q 014285 144 LNFALDEIARIL--PG-S-EFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI---P-------AVSPAEA 208 (427)
Q Consensus 144 ~~~~~~~l~~~~--~g-~-~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i---~-------~~~~~~~ 208 (427)
++.+|+.|++.. .+ . ..++|++|||||||||+||.+|+|||+||||. +++||+|.++ + ..+++++
T Consensus 71 ie~~~~~l~~~~~~~~g~~~~~~A~saID~ALWDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~g~~~~~~~~~~e~~ 150 (433)
T 3rcy_A 71 IELMFRRVYSSGFTQRPDLTAIGAFSGLEIACWDILGKARGRPVWALLGGKMNPRIRAYTYLYPLPHHPITPFWTSADMA 150 (433)
T ss_dssp HHHHHHHHHHTTTCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTCCSCSSEEEEEECCCCTTSCHHHHTTCHHHH
T ss_pred HHHHHHHHHhcccccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCCCCCeEEEEEEEcccCCcccccCCCCHHHH
Confidence 999999998742 22 2 35789999999999999999999999999996 8899999865 2 2689999
Q ss_pred HHHHHHHhhcCCcEEEEeccC-------------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCC
Q 014285 209 SELASKYCKLGFSTLKLNVGR-------------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMG 274 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~-------------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~ 274 (427)
.+.+++++++||++||+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+++++.|++++
T Consensus 151 ~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le~~~ 230 (433)
T 3rcy_A 151 AESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYS 230 (433)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhcC
Confidence 999999999999999999974 35789999999999 5899999999999999999999999999999
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHc
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKS 353 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~ 353 (427)
+ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++
T Consensus 231 i--~~iEeP~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~ 304 (433)
T 3rcy_A 231 P--LWYEEPVPPDNVGAMAQVAR----AVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVY 304 (433)
T ss_dssp C--SEEECCSCTTCHHHHHHHHH----HSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTT
T ss_pred C--CEEECCCChhhHHHHHHHHh----ccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHc
Confidence 7 49999999999999999986 68999999999999999999999999999999999997 99999999999999
Q ss_pred CCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 354 GLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 354 gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
|+++++|+ .+|+|+++|++|++++++|+.++|++.+ .+.++++.+++.++||++.+|++||||||+|+++|
T Consensus 305 gv~~~~h~-~~s~i~~aa~lhlaaa~pn~~~~E~~~~-~~~~~~~~~~~~~~~G~i~~p~~PGLGve~d~~~l 375 (433)
T 3rcy_A 305 NAQMAPHL-YAGPVEWAANVHFAASIPNILMCESIET-PFHDALIKGSIRVEGGYITPPEAPGLGIEVDEALA 375 (433)
T ss_dssp TCEECCCC-SSCHHHHHHHHHHHHTCTTBCCEECCCC-HHHHHHTTTCSCEETTEECCCCSSBTCCCCCHHHH
T ss_pred CCEEEecC-CCCHHHHHHHHHHHHHhccCcEEEeccc-hhhhhhcCCCceEECCEEEcCCCCcCCcccCHHHH
Confidence 99999998 5999999999999999999988888765 44567778889999999999999999999999865
No 47
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=100.00 E-value=3.3e-67 Score=534.56 Aligned_cols=344 Identities=15% Similarity=0.180 Sum_probs=300.7
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~~ 143 (427)
|||++|+++.+++|+ | . +..++.++|||+||+|++||||+.+.. ++++. ....+++ +.|.|+|+++.+
T Consensus 2 MkIt~i~~~~v~~pl--p-~-----~~~~~~~~V~v~td~G~~G~GE~~~~~-~~~~~--~~~~i~~~l~p~liG~dp~~ 70 (404)
T 4e5t_A 2 MRLSDIETFVVGNPP--P-R-----HGGRYFIFVKLVTACGITGYGEIYNAT-FGPDL--VAKMAEDVFARQFAGEDPHH 70 (404)
T ss_dssp CCEEEEEEEEEECCT--T-C-----TTCSEEEEEEEEETTSCEEEEEECCCS-SCHHH--HHHHHHHHHHHHTTTSCTTC
T ss_pred CEEEEEEEEEeccCC--c-c-----cCCCceEEEEEEECCCCEEEEeeccCC-CchHH--HHHHHHHHHHHHhcCCChhH
Confidence 899999999999998 4 1 224678999999999999999996432 22222 1223444 679999999999
Q ss_pred HHHHHHHHHHHC---CCC-hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeec---------------CC
Q 014285 144 LNFALDEIARIL---PGS-EFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIP---------------AV 203 (427)
Q Consensus 144 ~~~~~~~l~~~~---~g~-~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~---------------~~ 203 (427)
++.+|+.|++.. .+. ..+++++|||||||||+||.+|+|||+||||. ++++|+|.+++ ..
T Consensus 71 ~e~~~~~~~~~~~~~~~~~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~~~~p~~d~~~~~~ 150 (404)
T 4e5t_A 71 IEKLWHKTYGAGYTQRPDVTVMGVLSGLEMACWDIIGKAAGKPAYELLGGKVHERLRSYTYLYPTDGDVYPDPDKPNVYN 150 (404)
T ss_dssp HHHHHHHHHTTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTCCCCSSEEEEEECCC----------CCCTTT
T ss_pred HHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHcCCCCcCeEEEEEEeccccccccccccccccCC
Confidence 999999997642 111 23679999999999999999999999999995 89999997653 45
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCC-------------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRN-------------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGK 269 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~-------------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~ 269 (427)
+++++.+++++++++||++||+|+|.+ +++|++++++||+ .++++.|+||+|++|++++|++++++
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~ 230 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARR 230 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHH
Confidence 899999999999999999999999854 6889999999999 57999999999999999999999999
Q ss_pred hhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHH
Q 014285 270 LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIK 348 (427)
Q Consensus 270 L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~ 348 (427)
|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| +++++++++
T Consensus 231 l~~~~i--~~iEeP~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~ 304 (404)
T 4e5t_A 231 LEAYDP--LWFEEPIPPEKPEDMAEVAR----YTSIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAA 304 (404)
T ss_dssp HGGGCC--SEEECCSCTTCHHHHHHHHH----HCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHH
T ss_pred HhhcCC--cEEECCCCcccHHHHHHHHh----hCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHH
Confidence 999997 49999999999999999986 68999999999999999999999999999999999997 999999999
Q ss_pred HHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceecc-CCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 349 ATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNL-NTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 349 ~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~-~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|+++|+++++|++ +|+|+++|++|++++++|+.+.|. +....+.++++.+++.++||++.+|++||||+|+|++.+
T Consensus 305 ~A~~~gi~~~~h~~-~s~i~~aa~~hlaaa~p~~~~~e~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~~ 382 (404)
T 4e5t_A 305 MAECHSAQIAPHLY-CGPLVALANIQLATCSPNFLVLESIRTFDGFFAELLTTPIRWENGYIIPSQEPGLGHDLNEDVA 382 (404)
T ss_dssp HHHHTTCEECCCCS-SCHHHHHHHHHHHHTCTTBCCEEESTTSCTHHHHTBSSCCEEETTEEECCCSSBTSSCBCHHHH
T ss_pred HHHHcCCEEeecCC-CcHHHHHHHHHHHHhCCCceeEEecccccchhHHhcCCCCeeeCCEEECCCCCCCCcCCCHHHH
Confidence 99999999999985 799999999999999999988873 333334567788889999999999999999999999864
No 48
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=100.00 E-value=1.3e-66 Score=520.45 Aligned_cols=340 Identities=28% Similarity=0.421 Sum_probs=314.5
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchH-HHHHHHHHHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQT-KALVKVREACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~-~~~~~~~~~~~~l~g~~~~~ 143 (427)
|||++++++.+++|++.||.++.++.+.++.++|+|+|++|.+||||+.+.+.|+++.. .....++++.|.|+|+++.+
T Consensus 2 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~i~~l~~~l~g~d~~~ 81 (345)
T 2zad_A 2 SRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERVEALLAIENAVREMITGIDVRN 81 (345)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCHHHHCCCHHHHHHTHHHHHHHHTTCBGGG
T ss_pred CEEEEEEEEEEEeeccCCEEecCeeEeeceEEEEEEEECCCCEEEEEecCCCCcCCCCHHHHHHHHHHHHHHhCCCChhh
Confidence 79999999999999999999999999999999999999999999999998765555433 33334566899999999999
Q ss_pred HHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcEE
Q 014285 144 LNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTL 223 (427)
Q Consensus 144 ~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~i 223 (427)
++.+|+.| +.+.+ .+++++|||+||||+.||..|+|||+||||.++++|+|.+++..+++++.+.+++++++||+++
T Consensus 82 ~~~~~~~l-~~~~~--~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~i 158 (345)
T 2zad_A 82 YARIFEIT-DRLFG--FPSLKAAVQFATLDALSQELGTQVCYLLGGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVI 158 (345)
T ss_dssp HHHHHHHH-TTCTT--SHHHHHHHHHHHHHHHHHHHTSCHHHHTTCCCSEEEBCEEECSCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHH-HHhcc--chHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceeeeEEecCCCHHHHHHHHHHHHHcCcCEE
Confidence 99999998 43332 3679999999999999999999999999998889999999988899999999999999999999
Q ss_pred EEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCc--eEeCCCCCCChhhHHHHHHhhcc
Q 014285 224 KLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV--LFEQPVHRDDWSGLHDVSNFARD 301 (427)
Q Consensus 224 KlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~--~iEqP~~~~d~~~~~~L~~~~r~ 301 (427)
|+|+|.++++|++++++||+.++++.|+||+|++|++++|+++++.|+++++ . |||||++++|++++++|++
T Consensus 159 Kik~g~~~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~~~iE~P~~~~~~~~~~~l~~---- 232 (345)
T 2zad_A 159 KIKVGENLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGI--DIAVYEQPVRREDIEGLKFVRF---- 232 (345)
T ss_dssp EEECCSCHHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTC--CCSEEECCSCTTCHHHHHHHHH----
T ss_pred EEeecCCHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC--CeeeeeCCCCcccHHHHHHHHH----
Confidence 9999998999999999999998899999999999999999999999999986 7 9999999999999999986
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcC
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLG 380 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~ 380 (427)
++++||++||++.+..+++++++.+++|++++|+++ | ++++++++++|+++|+++++|++.||+|++++++|++++++
T Consensus 233 ~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hlaa~~~ 311 (345)
T 2zad_A 233 HSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGCMGESSLGINQSVHFALGTG 311 (345)
T ss_dssp HSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred hCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999999 9 99999999999999999999999999999999999999999
Q ss_pred CcceeccCCCcccccCCCCCceeeeCcEEecCCC
Q 014285 381 CIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNA 414 (427)
Q Consensus 381 ~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~ 414 (427)
|+.+.|+++|+.+.++++.+++.++||++.+|++
T Consensus 312 ~~~~~e~~~~~~~~~d~~~~~~~~~~G~~~~p~~ 345 (345)
T 2zad_A 312 AFEFHDLDSHLMLKEEVFRGKFIQDGPRMRVKDQ 345 (345)
T ss_dssp CCSEECCCGGGGBSSCCCCCSSEEETTEEECCCC
T ss_pred CCceeecCCchhhhhccccCCcEEECCEEeCCCC
Confidence 9999999988777788888889999999999974
No 49
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=100.00 E-value=4.6e-67 Score=533.26 Aligned_cols=340 Identities=13% Similarity=0.159 Sum_probs=300.6
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~ 142 (427)
.||||+|+++.++.. ..+.++|||+||+|++||||+.+.. +.+ .....+++ +.|.|+|+++.
T Consensus 5 ~mkIt~v~~~~~~~~-------------~~~~~~V~v~td~G~~G~GE~~~~~--~~~--~~~~~i~~~l~p~liG~d~~ 67 (401)
T 3sbf_A 5 ETIISDIHCIITKPD-------------RHNLITVVVETNEGVTGFGCATFQQ--RPL--AVKTMVDEYLKPILIGKNAN 67 (401)
T ss_dssp CCBEEEEEEEEECSS-------------SSCEEEEEEEETTSCEEEEECCCTT--SHH--HHHHHHHHTHHHHHTTSBTT
T ss_pred CeEEEEEEEEEEcCC-------------CceEEEEEEEeCCCCEEEEccccCC--CHH--HHHHHHHHHHHHHHcCCChh
Confidence 399999999765310 1267999999999999999997532 222 22233555 89999999999
Q ss_pred CHHHHHHHHHHHC--C-CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhc
Q 014285 143 TLNFALDEIARIL--P-GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKL 218 (427)
Q Consensus 143 ~~~~~~~~l~~~~--~-g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~ 218 (427)
+++.+|+.|++.. . |...+++++|||||||||+||.+|+|||+||||. ++++|+|.+++..+++++.+.+++++++
T Consensus 68 ~~e~~~~~~~~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~ 147 (401)
T 3sbf_A 68 NIEDLWQMMMVNAYWRNGPVINNAISGVDMALWDIKAKLAGMPLHQLFGGKSRDAIPVYTHATSDTMEGIYDLVEGFLEK 147 (401)
T ss_dssp CHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCSSSSEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHhHhHhCCcHHHHhCCCcCCeeeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 9999999998752 2 2234679999999999999999999999999997 7899999988888999999999999999
Q ss_pred CCcEEEEeccCC------------------------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhC
Q 014285 219 GFSTLKLNVGRN------------------------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDM 273 (427)
Q Consensus 219 Gf~~iKlKiG~~------------------------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~ 273 (427)
||++||+|+|.+ ++.|++++++||+ .++++.|+||+|++|++++|++++++|+++
T Consensus 148 G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~L~~~ 227 (401)
T 3sbf_A 148 GYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEVEQY 227 (401)
T ss_dssp TCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred CCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 999999999853 4678999999999 589999999999999999999999999999
Q ss_pred CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHH
Q 014285 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRK 352 (427)
Q Consensus 274 ~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~ 352 (427)
++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|++
T Consensus 228 ~i--~~iEqP~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A~~ 301 (401)
T 3sbf_A 228 KP--YFIEDILPPNQTEWLDNIRS----QSSVSLGLGELFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLCQN 301 (401)
T ss_dssp CC--SCEECSSCTTCGGGHHHHHT----TCCCCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHH
T ss_pred CC--CEEECCCChhHHHHHHHHHh----hCCCCEEeCCccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHH
Confidence 97 49999999999999999985 78999999999999999999999999999999999997 9999999999999
Q ss_pred cCCcEEEcccC-chhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 353 SGLHLMIDGMI-ETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 353 ~gi~~~~~s~~-es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|+++++|++. +|+|+++|++|++++++|+.+.|++.+....++++.+++.++||++.+|++||||+|+|+++|
T Consensus 302 ~gi~~~~h~~~~~s~i~~aA~~hlaaa~p~~~~~e~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 376 (401)
T 3sbf_A 302 FGVRIAWHCAPDMTPIGAAVNTHLNVHLHNAAIQEHVEYNGNTHKVFPNAAEPINGYLYASEIAGIGVEIDREAA 376 (401)
T ss_dssp HTCEECCCCCTTSCHHHHHHHHHHHHHSTTBCCEECCCCCHHHHHHSTTCCCCBTTEECCCCSSBSSCCCCHHHH
T ss_pred cCCEEEecCCcccchHHHHHHHHHHHhCCCcceeeccCCchhhHhhcCCCCeeeCCEEECCCCCCCCceECHHHH
Confidence 99999999986 799999999999999999988888765444567778888999999999999999999999865
No 50
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=100.00 E-value=5.3e-67 Score=535.75 Aligned_cols=339 Identities=14% Similarity=0.168 Sum_probs=300.4
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~ 142 (427)
.|||++|+.+.++- .++.++|||+||+|++||||+.+.. . .......+++ +.|.|+|+++.
T Consensus 22 ~mkIt~v~~~~~~~--------------~~~~v~V~v~td~Gi~G~GE~~~~~--~--~~~~~~~i~~~l~p~LiG~dp~ 83 (424)
T 3v3w_A 22 SMKIVDAKVIVTCP--------------GRNFVTLKIVTDQGIYGIGDATLNG--R--EKSVVSYLEDYLIPVLIGRDPQ 83 (424)
T ss_dssp -CCEEEEEEEEECS--------------SSCEEEEEEEETTSCEEEEECCCTT--C--HHHHHHHHHHTHHHHHTTSCTT
T ss_pred CCEEEEEEEEEEcC--------------CCCEEEEEEEECCCCEEEEeccCCC--C--hHHHHHHHHHHHHHHhcCCChh
Confidence 49999999876431 1367999999999999999986532 1 1122334555 89999999999
Q ss_pred CHHHHHHHHHHHC--C-CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhc
Q 014285 143 TLNFALDEIARIL--P-GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKL 218 (427)
Q Consensus 143 ~~~~~~~~l~~~~--~-g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~ 218 (427)
+++.+|+.|++.. . |...+++++|||||||||+||.+|+|||+||||. +++||+|.+++..+++++.+++++++++
T Consensus 84 ~ie~i~~~~~~~~~~~~g~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~ 163 (424)
T 3v3w_A 84 QIEDIWQFFYRGAYWRRGPVGMTALAAIDVALWDIKAKLANMPLYQLLGGKSRERILSYTHANGKDLDSTLEAVRKAKDK 163 (424)
T ss_dssp CHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHTCCSCSSEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhccccCCCchHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCcCCCceeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 9999999998753 2 2234679999999999999999999999999997 7899999988888999999999999999
Q ss_pred CCcEEEEeccC---------------------------------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHH
Q 014285 219 GFSTLKLNVGR---------------------------------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAV 264 (427)
Q Consensus 219 Gf~~iKlKiG~---------------------------------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~ 264 (427)
||++||+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+
T Consensus 164 Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~l~vDaN~~~~~~~A~ 243 (424)
T 3v3w_A 164 GYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIHLLHDVHHRLTPIEAA 243 (424)
T ss_dssp TCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCcEEEeCCCCCCHHHHH
Confidence 99999999984 14678999999999 589999999999999999999
Q ss_pred HHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHH
Q 014285 265 EVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGT 343 (427)
Q Consensus 265 ~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~ 343 (427)
+++++|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++
T Consensus 244 ~~~~~L~~~~i--~~iEqP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~ 317 (424)
T 3v3w_A 244 RLGKALEPYHL--FWMEDAVPAENQESFKLIRQ----HTTTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQM 317 (424)
T ss_dssp HHHHHHGGGCC--SEEECCSCCSSTTHHHHHHH----HCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHH
T ss_pred HHHHHHHhcCC--CEEECCCChHhHHHHHHHHh----hCCCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHHH
Confidence 99999999997 49999999999999999986 68999999999999999999999999999999999997 9999
Q ss_pred HHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccC
Q 014285 344 LQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLK 422 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d 422 (427)
++++++|+++|+++++|++. +|+|+++|++|++++++|+.+.|++.+....++++.+++.++||++.+|++||||||+|
T Consensus 318 ~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaaa~pn~~~~e~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGveld 397 (424)
T 3v3w_A 318 RRIADFASLFHVRTGFHGATDLSPVCMGAALHFDYWVPNFGIQEHMAHSEQMNAVFPHAYTFNDGYFTPGEKPGHGVDID 397 (424)
T ss_dssp HHHHHHHHTTTCEEEECCCTTSCHHHHHHHHHHHHHCTTEEEEECCCCCHHHHHHSCBCCEEETTEEECCSSSBTSBCCC
T ss_pred HHHHHHHHHcCCEEEecCCCcccHHHHHHHHHHHHhCCCcceEeecCcchhhHhhcCCCceeeCCEEECCCCCCCCcccC
Confidence 99999999999999999987 79999999999999999998888876554556778888999999999999999999999
Q ss_pred CCcC
Q 014285 423 WTIV 426 (427)
Q Consensus 423 ~~~v 426 (427)
+++|
T Consensus 398 ~~~l 401 (424)
T 3v3w_A 398 EKLA 401 (424)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 51
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=100.00 E-value=1.7e-67 Score=534.99 Aligned_cols=342 Identities=16% Similarity=0.183 Sum_probs=298.4
Q ss_pred ceeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHH---------HHh
Q 014285 63 FWVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVR---------EAC 133 (427)
Q Consensus 63 ~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~---------~~~ 133 (427)
..|||++|+++.+++|+ +...++.++|+|+||+|++||||+.+.+. ... ..++ .+.
T Consensus 8 ~~mkI~~i~~~~v~~p~---------~~~~~~~~~V~v~td~G~~G~GE~~~~~~----~~~--~~~~~~~~~~~~~~l~ 72 (394)
T 3mkc_A 8 AVAPIKSIEFIPVNYQA---------SNWSQNTVVVKVTDENGVYGLGEADGSPD----AIL--AYANIETEHKWLTNIT 72 (394)
T ss_dssp TCCCEEEEEEEEEEEC-------------CEEEEEEEEEETTSCEEEEEECSCHH----HHH--HHHTCCCCBTTBCCTT
T ss_pred CCCeEEEEEEEEEecCC---------CCCCccEEEEEEEECCCCeEEEEecCcHH----HHH--HHHhcccchhhHHHHH
Confidence 34999999999999997 23457889999999999999999975321 111 1122 278
Q ss_pred hHhcCCCCCCHHHHHHHHHHHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeec--C-C--
Q 014285 134 QFLRQSPPTTLNFALDEIARIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIP--A-V-- 203 (427)
Q Consensus 134 ~~l~g~~~~~~~~~~~~l~~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~--~-~-- 203 (427)
|.|+|+++.+++.+|+.|++.. .+...+++++|||||||||+||.+|+|||+||||. ++++|+|++++ . .
T Consensus 73 p~liG~dp~~~e~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~s~~~~~~~~~ 152 (394)
T 3mkc_A 73 EKAIGRLPIEINAIWDAMYDATQWQGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLGGTNKDKVHPYLTLYPAIPVDA 152 (394)
T ss_dssp TTTTTSCTTCHHHHHHHHHHHTHHHHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEECCEEECCCSCC-CC
T ss_pred HHhCCCChhHHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcCCCcCCeeEEEEecCCcCCCCc
Confidence 9999999999999999998642 12334679999999999999999999999999997 68999998876 2 2
Q ss_pred CHH----HHHHHHHHHhhcCCcEEEE-ecc---CCchhhHHHHHHHHH-hCCCcEEEEeCCCCC-CHHHHHHHHHHhhhC
Q 014285 204 SPA----EASELASKYCKLGFSTLKL-NVG---RNITADFDVLQAIHA-VHPHCSFILDANEGY-TSEEAVEVLGKLNDM 273 (427)
Q Consensus 204 ~~~----~~~~~~~~~~~~Gf~~iKl-KiG---~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~-s~~~A~~~l~~L~~~ 273 (427)
+++ ++.+.+++++++||++||+ |+| .++++|++++++||+ .++++.|+||+|++| ++++|++++++|+++
T Consensus 153 ~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~ 232 (394)
T 3mkc_A 153 SLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDL 232 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGG
T ss_pred chhhhHHHHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhc
Confidence 344 6677888999999999999 999 578999999999999 589999999999999 999999999999999
Q ss_pred CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHH
Q 014285 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRK 352 (427)
Q Consensus 274 ~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~ 352 (427)
++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|++
T Consensus 233 ~i--~~iEeP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~ 306 (394)
T 3mkc_A 233 EL--YFAEATLQHDDLSGHAKLVE----NTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATA 306 (394)
T ss_dssp CC--SEEESCSCTTCHHHHHHHHH----HCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHH
T ss_pred CC--eEEECCCCchhHHHHHHHHh----hCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHH
Confidence 97 49999999999999999986 68999999999999999999999999999999999997 9999999999999
Q ss_pred cCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCc----ccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 353 SGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPF----LLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 353 ~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~----~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|+++++|++ ||+|++++++|++++++|+.+.|++.+. .+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 307 ~gi~~~~h~~-~s~i~~aa~~hlaaa~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 383 (394)
T 3mkc_A 307 NNVQVMPHNW-KTGITSAAAIHYQFAVGNAPYFEYVHPEFCDGELRKYLVTPEAELVDGGFAKPTAPGLGIDLNQEFL 383 (394)
T ss_dssp TTCEECCCCC-SCHHHHHHHHHHHHHTCCSSCCEECCGGGCCCHHHHHSEECCCCCBTTBEECCCSSBTCCEECHHHH
T ss_pred cCCEEeecCC-CcHHHHHHHHHHHHhCCCceeEEeeccccccchhHHhhccCCCcccCCEEECCCCCCCCceeCHHHH
Confidence 9999999997 9999999999999999999998887653 23456677788899999999999999999999875
No 52
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=100.00 E-value=8.7e-67 Score=533.50 Aligned_cols=340 Identities=15% Similarity=0.171 Sum_probs=301.2
Q ss_pred ceeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCC
Q 014285 63 FWVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPP 141 (427)
Q Consensus 63 ~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~ 141 (427)
..||||+|+.+.++- .++.++|||+||+|++||||+.+.. .. ......+++ +.|.|+|+++
T Consensus 15 ~~mkIt~v~~~~~~~--------------~~~~~~V~v~td~G~~G~GE~~~~~--~~--~~~~~~i~~~l~p~LiG~dp 76 (418)
T 3r4e_A 15 SHMKITAARVIITCP--------------GRNFVTLKIETDQGVYGIGDATLNG--RE--LSVVAYLQEHVAPCLIGMDP 76 (418)
T ss_dssp CCCCEEEEEEEEECS--------------SSCEEEEEEEETTSCEEEEECCCTT--CH--HHHHHHHHHTHHHHHTTSCT
T ss_pred CCCEEEEEEEEEEcC--------------CCcEEEEEEEECCCCEEEEeccCCC--Ch--HHHHHHHHHHHHHHhcCCCh
Confidence 349999999875421 1367999999999999999986532 11 122333555 8999999999
Q ss_pred CCHHHHHHHHHHHC--C-CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhh
Q 014285 142 TTLNFALDEIARIL--P-GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCK 217 (427)
Q Consensus 142 ~~~~~~~~~l~~~~--~-g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~ 217 (427)
.+++.+|+.|++.. . |...+++++|||||||||+||.+|+|||+||||. +++||+|.+++..+++++.++++++++
T Consensus 77 ~~ie~l~~~~~~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~ 156 (418)
T 3r4e_A 77 RRIEDIWQYVYRGAYWRRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLGGRSRDGIMVYGHANGSDIAETVEAVGHYID 156 (418)
T ss_dssp TCHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCSCSSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCCccCCeeeEEEeCCCCCHHHHHHHHHHHHH
Confidence 99999999998753 2 2234679999999999999999999999999997 789999998888899999999999999
Q ss_pred cCCcEEEEeccCC---------------------------------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHH
Q 014285 218 LGFSTLKLNVGRN---------------------------------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEA 263 (427)
Q Consensus 218 ~Gf~~iKlKiG~~---------------------------------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A 263 (427)
+||++||+|+|.. ++.|++++++||+ .++++.|+||+|++|++++|
T Consensus 157 ~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A 236 (418)
T 3r4e_A 157 MGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHHLLHDGHHRYTPQEA 236 (418)
T ss_dssp TTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHH
T ss_pred cCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCeEEEeCCCCCCHHHH
Confidence 9999999999841 4678999999999 58999999999999999999
Q ss_pred HHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHH
Q 014285 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLG 342 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~ 342 (427)
++++++|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| +++
T Consensus 237 ~~~~~~L~~~~i--~~iEqP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~ 310 (418)
T 3r4e_A 237 ANLGKMLEPYQL--FWLEDCTPAENQEAFRLVRQ----HTVTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTH 310 (418)
T ss_dssp HHHHHHHGGGCC--SEEESCSCCSSGGGGHHHHH----HCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred HHHHHHHHhhCC--CEEECCCCccCHHHHHHHHh----cCCCCEEEcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHH
Confidence 999999999997 49999999999999999986 68999999999999999999999999999999999997 999
Q ss_pred HHHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCccccc
Q 014285 343 TLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFL 421 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~ 421 (427)
+++++++|+++|+++++|++. +|+|+++|++|++++++|+.+.|++.+....++++.+++.++||++.+|++||||+|+
T Consensus 311 ~~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaaa~pn~~~~e~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGvel 390 (418)
T 3r4e_A 311 LRRIADLASLYQVRTGCHGPTDLSPVTMGCALHFDTWVPNFGIQEYMRHTEETDAVFPHDYWFEKGELFVGETPGHGVDI 390 (418)
T ss_dssp HHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHHCTTEEEEECCCCCHHHHHHSCBSEEEETTEEEECCCSBSSBCC
T ss_pred HHHHHHHHHHcCCEEeecCCCCccHHHHHHHHHHHHhCCCcceEeecCcchhhHhhcCCCceeeCCEEECCCCCCCCCcc
Confidence 999999999999999999997 7999999999999999999888887654455677888899999999999999999999
Q ss_pred CCCcC
Q 014285 422 KWTIV 426 (427)
Q Consensus 422 d~~~v 426 (427)
|+++|
T Consensus 391 d~~~l 395 (418)
T 3r4e_A 391 DEELA 395 (418)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 99875
No 53
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=100.00 E-value=2.1e-67 Score=534.62 Aligned_cols=341 Identities=18% Similarity=0.216 Sum_probs=297.4
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH---------Hhh
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE---------ACQ 134 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~---------~~~ 134 (427)
.|||++|+++.+++|+ +...++.++|+|+||+|++||||+.+.+ .... ..++. +.|
T Consensus 4 ~mkI~~i~~~~v~~p~---------~~~~~~~~~V~v~td~G~~G~GE~~~~~----~~~~--~~~~~~~~~~~~~~l~p 68 (394)
T 3mqt_A 4 GANIVSVEFIPVNVAA---------TNWSENTVIVKVTDENGVYGLGEADGPP----ECMK--AFSEIENEHKWLNNIKE 68 (394)
T ss_dssp -CCEEEEEEEEEECC--------------CEEEEEEEEETTSCEEEEEECSCH----HHHH--HHHTCCCCBTTBCCGGG
T ss_pred CCeEeEEEEEEEecCC---------CCCCccEEEEEEEECCCCEEEEEECCcH----HHHH--HHHhcccchhhHHHHHH
Confidence 3999999999999997 2345789999999999999999997532 1111 11222 789
Q ss_pred HhcCCCCCCHHHHHHHHHHHC--CC--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeec--C-C--C
Q 014285 135 FLRQSPPTTLNFALDEIARIL--PG--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIP--A-V--S 204 (427)
Q Consensus 135 ~l~g~~~~~~~~~~~~l~~~~--~g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~--~-~--~ 204 (427)
.|+|++|.+++.+|+.|++.. .| ...+++++|||||||||+||.+|+|||+||||. ++++|+|++++ . . +
T Consensus 69 ~liG~dp~~~e~~~~~l~~~~~~~g~~g~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~s~~~~~~~~~~ 148 (394)
T 3mqt_A 69 AVIGRDPLEFRANYNRMYDTTKWIGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMGGAQKAQLTPYFTLYPSVAADAT 148 (394)
T ss_dssp GTTTSCTTCHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCSSSBCCEEECCCCCCTTCC
T ss_pred HhCCCChhHHHHHHHHHHHhhhhhCCccHHHHHHHHHHHHHHHHHHhHcCCcHHHHcCCCCCCeEEEEEEecCCCCCCcc
Confidence 999999999999999998752 22 234679999999999999999999999999997 68999999876 3 2 3
Q ss_pred HH----HHHHHHHHHhhcCCcEEEE-ecc---CCchhhHHHHHHHHH-hCCCcEEEEeCCCCC-CHHHHHHHHHHhhhCC
Q 014285 205 PA----EASELASKYCKLGFSTLKL-NVG---RNITADFDVLQAIHA-VHPHCSFILDANEGY-TSEEAVEVLGKLNDMG 274 (427)
Q Consensus 205 ~~----~~~~~~~~~~~~Gf~~iKl-KiG---~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~-s~~~A~~~l~~L~~~~ 274 (427)
++ ++.+.+++++++||++||+ |+| .++++|++++++||+ .++++.|+||+|++| ++++|+++++.|++++
T Consensus 149 ~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~ 228 (394)
T 3mqt_A 149 LSEIVEAYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDID 228 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGC
T ss_pred hhhhHHHHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcC
Confidence 44 5667888899999999999 999 578999999999999 589999999999999 9999999999999999
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHc
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKS 353 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~ 353 (427)
+ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++
T Consensus 229 i--~~iEeP~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 302 (394)
T 3mqt_A 229 L--YFIEACLQHDDLIGHQKLAA----AINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHH 302 (394)
T ss_dssp C--SEEESCSCTTCHHHHHHHHH----HSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHH
T ss_pred C--eEEECCCCcccHHHHHHHHh----hCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHc
Confidence 7 49999999999999999986 68999999999999999999999999999999999997 99999999999999
Q ss_pred CCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCc----ccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 354 GLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPF----LLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 354 gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~----~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
|+++++|++ ||+|+++|++|++++++|+.++|++.+. .+.++++.+++.++||++.+|++||||+|+|+++|
T Consensus 303 gi~~~~h~~-~s~i~~aa~~hlaaa~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGv~~d~~~l 378 (394)
T 3mqt_A 303 NAQLMPHNW-KTGITAAAARHFGIVCHISEYVEYLHPDFWNGTLTQQLTLNEPKIIDGAIEVSDKPGLGIELNIEFV 378 (394)
T ss_dssp TCEECCCCC-SCHHHHHHHHHHHHHCTTCSCCEECCTTTCCCHHHHHTBSSCCCCBTTBBCCCCCSBTCCCBCHHHH
T ss_pred CCEEeccCC-CchHHHHHHHHHHHhCCCCceEEecCcccccchhHHhhccCCCcccCCEEECCCCCCCCCCcCHHHH
Confidence 999999997 9999999999999999999998887652 23456777888999999999999999999999865
No 54
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=100.00 E-value=2e-67 Score=524.50 Aligned_cols=331 Identities=23% Similarity=0.382 Sum_probs=293.7
Q ss_pred EEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHHHhhHhcCC-CCCCHHH
Q 014285 69 RAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVREACQFLRQS-PPTTLNF 146 (427)
Q Consensus 69 ~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~~~~~l~g~-~~~~~~~ 146 (427)
+++++++++||++||.++.++.+.++.++|+| |++|++|||||.+.++++ ++.+ ....++.+. |.|+ ++.+++.
T Consensus 2 ~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~v-td~G~~G~GE~~~~~~~g-e~~~~~~~~l~~~~--l~g~~d~~~~e~ 77 (338)
T 3ijl_A 2 KMTFFPYELKLRHVFTVATYSRTTTPDVQVEI-EYEGVTGYGEASMPPYLG-ETVESVMNFLKKVN--LEQFSDPFQLED 77 (338)
T ss_dssp CEEEEECCEEEEEEEEETTEEEEEECEEEEEE-EETTEEEEEEEECCGGGS-CCHHHHHHHHTTCC--CTTCCCTTCHHH
T ss_pred eEEEEEEEEeccCcEEeeCcEEEEeeEEEEEE-EeCCcEEEEeeeCCCCCC-CCHHHHHHHHHHHH--hcCCCCccCHHH
Confidence 46789999999999999999999999999999 899999999999876543 3322 222233322 7888 9999999
Q ss_pred HHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeee-eeecCCCHHHHHHHHHHHhhcCCcEEEE
Q 014285 147 ALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTA-ITIPAVSPAEASELASKYCKLGFSTLKL 225 (427)
Q Consensus 147 ~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~-~~i~~~~~~~~~~~~~~~~~~Gf~~iKl 225 (427)
+|+.|++...+ .+++++||||||||++||..|+|||+||||.++++|.| ++++..+++++.++++++++ ||++||+
T Consensus 78 ~~~~l~~~~~~--~~~A~said~ALwDl~gk~~g~Pl~~LlGg~~~~v~~~~~~~~~~~~e~~~~~a~~~~~-g~~~~K~ 154 (338)
T 3ijl_A 78 ILSYVDSLSPK--DTAAKAAVDIALHDLVGKLLGAPWYKIWGLNKEKTPSTTFTIGIDTPDVVRAKTKECAG-LFNILKV 154 (338)
T ss_dssp HHHHHHHTCSC--CHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCGGGCCBBCCBCCCCCHHHHHHHHHHHHT-TCSSEEE
T ss_pred HHHHHHHhccC--CHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCcceEEEEEeCCCHHHHHHHHHHHHh-cccEEEE
Confidence 99999875433 36899999999999999999999999999998888864 56788899999999988866 8999999
Q ss_pred eccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCC-HHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC
Q 014285 226 NVGRNITADFDVLQAIHAVHPHCSFILDANEGYT-SEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG 304 (427)
Q Consensus 226 KiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s-~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~ 304 (427)
|+|. ++|++++++||+..+ ..||||||++|+ +++|++++++|+++++ .|||||++++|+++|++|++ +++
T Consensus 155 Kvg~--~~d~~~v~avR~~~~-~~l~vDaN~~~t~~~~A~~~~~~l~~~~i--~~iEeP~~~~d~~~~~~l~~----~~~ 225 (338)
T 3ijl_A 155 KLGR--DNDKEMIETIRSVTD-LPIAVDANQGWKDRQYALDMIHWLKEKGI--VMIEQPMPKEQLDDIAWVTQ----QSP 225 (338)
T ss_dssp ECSS--SCHHHHHHHHHTTCC-CCEEEECTTCCCCHHHHHHHHHHHHHTTE--EEEECCSCTTCHHHHHHHHH----TCS
T ss_pred ecCc--HHHHHHHHHHHhhcC-CcEEEECcCCCCCHHHHHHHHHHHhhCCC--CEEECCCCCCcHHHHHHHHh----cCC
Confidence 9997 479999999999764 699999999995 9999999999999987 59999999999999999986 789
Q ss_pred CeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcc
Q 014285 305 ISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383 (427)
Q Consensus 305 iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~ 383 (427)
+|||+||++.+..++++++ +++|++|+|++++| ++++++++++|+++|+++++||++||+|++++++|+++.+ .
T Consensus 226 ipIa~dE~~~~~~~~~~~~--~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~~la~~~---~ 300 (338)
T 3ijl_A 226 LPVFADESLQRLGDVAALK--GAFTGINIKLMKCTGMREAWKMVTLAHALGMRVMVGCMTETSCAISAASQFSPAV---D 300 (338)
T ss_dssp SCEEESTTCCSGGGTGGGB--TTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHHTTGGGC---S
T ss_pred CCEEECCCCCCHHHHHHHH--hhCCEEEecccccCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHhccC---C
Confidence 9999999999999998876 78999999999997 9999999999999999999999999999999999999865 4
Q ss_pred eeccCCCcccccCCCCCceeeeCcEEecCCCCCccccc
Q 014285 384 YVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFL 421 (427)
Q Consensus 384 ~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~ 421 (427)
+.++++++.+.+|++.+ +.++||++.+|++||||||+
T Consensus 301 ~~~l~~~~~~~~d~~~~-~~~~~G~i~~p~~PGlGv~l 337 (338)
T 3ijl_A 301 FADLDGNLLISNDRFKG-VEVVNGKITLNDLPGIGVMK 337 (338)
T ss_dssp EECCCGGGGBSCCCCBC-CEEETTEEECCSCSBTCCBC
T ss_pred cccccchhhhhhcccCC-ceeECCEEECCCCCccceee
Confidence 56788888778888775 88999999999999999986
No 55
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=100.00 E-value=1.3e-66 Score=534.42 Aligned_cols=346 Identities=17% Similarity=0.214 Sum_probs=303.4
Q ss_pred ceeeEEEEEEEEEEeeccccccccceeEEe-eeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCC
Q 014285 63 FWVDVQRAEGRELNVALSAPLSLGLSSVEN-VENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPP 141 (427)
Q Consensus 63 ~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~-~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~ 141 (427)
-.|||++|+++++++| ..|+.++.+.... ...++|+|+||+ ++||||+... + .....++.+.|.|+|+++
T Consensus 25 ~~mkIt~i~~~~v~~p-~~p~~~~~g~~~~~~~~~~V~v~td~-~~G~GE~~g~-----~--~~~~~i~~l~p~LiG~d~ 95 (445)
T 3va8_A 25 QRSIIKEIVITPVAFH-DMPLLNSVGVHEPFALRSIIEIITED-SYGLGESYGD-----S--AHLDRLQKAADKIKGLSV 95 (445)
T ss_dssp HHTBCCEEEEEEEEEE-CCCBEETTEECCSEEEEEEEEEECSS-CEEEEEEECC-----H--HHHHHHHHHHHHHTTSBT
T ss_pred CCCEEEEEEEEEEecC-CcccccccCcccCceeEEEEEEEECC-CEEEEecCCc-----H--HHHHHHHHHHHHHCCCCh
Confidence 3499999999999999 8899998876533 567899999999 9999999531 2 122335678999999999
Q ss_pred CCHHHHHHHHHHHCCCC----------------hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeec---
Q 014285 142 TTLNFALDEIARILPGS----------------EFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIP--- 201 (427)
Q Consensus 142 ~~~~~~~~~l~~~~~g~----------------~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~--- 201 (427)
.+++.+|+.|++.+.+. ...++++|||+|||||+||.+|+|||+||||. +++||+|.++.
T Consensus 96 ~~ie~i~~~l~~~~~~~~~~~~~G~~G~~~~~~~~~~A~sAiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~~a~~~y~~ 175 (445)
T 3va8_A 96 YSTNVIYQRCVESLRNDTNTGGDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLGGRVRDSVQYSAYLFYKW 175 (445)
T ss_dssp TCHHHHHHHHHHHTTTCCC--CCSSTTSSCCSCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSSSEEEBCEEEECBC
T ss_pred hHHHHHHHHHHHhhhcccccccccccCccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCeEEEeeeecccc
Confidence 99999999998864221 34579999999999999999999999999997 78999965431
Q ss_pred -------------CCCHHHHHHHHHHHhhc-CCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHH
Q 014285 202 -------------AVSPAEASELASKYCKL-GFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEV 266 (427)
Q Consensus 202 -------------~~~~~~~~~~~~~~~~~-Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~ 266 (427)
..+++++.+++++++++ ||++||+|+|. ++++|++++++||+..|++.|+||||++|++++|+++
T Consensus 176 ~~~~g~~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai~~ 255 (445)
T 3va8_A 176 GGHPGDEDDEYGPALDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSKWV 255 (445)
T ss_dssp SSSTTSCCCTTCCBCSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHHH
T ss_pred cccccccccccccCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHHHH
Confidence 25899999999998875 99999999996 7899999999999966999999999999999999999
Q ss_pred HHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHH
Q 014285 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQ 345 (427)
Q Consensus 267 l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~ 345 (427)
+++|+++ + .|||||++ |++++++|++ ++++|||+||++.+..+++++++.+++|++|+|++++| ++++++
T Consensus 256 ~~~L~~~-l--~~iEeP~~--d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea~k 326 (445)
T 3va8_A 256 AKELEGI-V--EYLEDPAG--EIEGMAAVAK----EASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQT 326 (445)
T ss_dssp HHHTTTT-C--SEEESCBS--HHHHHHHHHT----TCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHHhhh-c--CeEeecCc--CHHHHHHHHH----cCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHHHH
Confidence 9999998 7 59999995 7999999985 78999999999999999999999999999999999997 999999
Q ss_pred HHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCccee-ccCCCcccc-cCCC-CCceeeeCcEEecCCCCCcccccC
Q 014285 346 IIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYV-NLNTPFLLS-EDPF-VGGCEVSGAIYNFTNARGQGGFLK 422 (427)
Q Consensus 346 ~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~-e~~~p~~~~-~~~~-~~~~~~~~G~i~~p~~pGlGve~d 422 (427)
++++|+++|+++++|++.|++|+++|++|++++++|+.+. +.+.|+... +|++ .+++.++||++.+|++||||||+|
T Consensus 327 ia~lA~~~gv~v~~h~~~e~~I~~aa~~hlaaa~p~~~~~~d~~~~~~~~~~d~~~~~~~~~~~G~i~vp~~PGLGveld 406 (445)
T 3va8_A 327 LASICATWGLRLSMHSNSHLGISLAAMTHLASATPNLDYACDTHWPWKRRDEDVVIEGALKWKDGGVIVPSGPGLGVELD 406 (445)
T ss_dssp HHHHHHHHTCEEEECCCSCCHHHHHHHHHHHHTCTTBCSCBCCCGGGSCTTCCSBCTTSCCEETTEEECCCSSBTSCCBC
T ss_pred HHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHhCCCCceeeeccchhhhcccccccCCCceEECCEEECCCCCcCCCccC
Confidence 9999999999999999999999999999999999998775 444455432 3554 568899999999999999999999
Q ss_pred CCcC
Q 014285 423 WTIV 426 (427)
Q Consensus 423 ~~~v 426 (427)
+++|
T Consensus 407 ~~~l 410 (445)
T 3va8_A 407 RERL 410 (445)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 56
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=100.00 E-value=1.1e-66 Score=533.54 Aligned_cols=339 Identities=14% Similarity=0.176 Sum_probs=300.5
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~ 142 (427)
.|||++|+++.++- .++.++|||+||+|++||||+.+.. . .......+++ +.|.|+|+++.
T Consensus 23 ~mkIt~v~~~~~~~--------------~~~~v~V~v~td~G~~G~GE~~~~~--~--~~~~~~~i~~~l~p~LiG~dp~ 84 (425)
T 3vcn_A 23 MLKIIDAKVIVTCP--------------GRNFVTLKITTEDGITGVGDATLNG--R--ELSVVSFLQDHMVPSLIGRDAH 84 (425)
T ss_dssp CCBEEEEEEEEECS--------------SSCEEEEEEEETTSCEEEEECCCTT--C--HHHHHHHHHHTTHHHHTTCBTT
T ss_pred CCEEEEEEEEEEcC--------------CCcEEEEEEEECCCCEEEEeccCCC--C--hHHHHHHHHHHHHHHhCCCChh
Confidence 39999999875421 1367999999999999999986532 1 1122333555 88999999999
Q ss_pred CHHHHHHHHHHHC--C-CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhc
Q 014285 143 TLNFALDEIARIL--P-GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKL 218 (427)
Q Consensus 143 ~~~~~~~~l~~~~--~-g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~ 218 (427)
+++.+|+.|++.. . |...+++++|||||||||+||.+|+|||+||||. +++||+|.+++..+++++.+++++++++
T Consensus 85 ~ie~i~~~~~~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~ 164 (425)
T 3vcn_A 85 QIEDIWQFFYRGSYWRGGPVAMTALAAVDMALWDIKGKVAGLPVYQLLGGACRTGVTVYGHANGETIEDTIAEAVKYKAM 164 (425)
T ss_dssp CHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTCCSSSSEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcCCCCCCeeeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 9999999998753 2 2234679999999999999999999999999997 7899999988888999999999999999
Q ss_pred CCcEEEEeccC----------------C-----------------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHH
Q 014285 219 GFSTLKLNVGR----------------N-----------------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAV 264 (427)
Q Consensus 219 Gf~~iKlKiG~----------------~-----------------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~ 264 (427)
||++||+|+|. + ++.|++++++||+ .++++.|+||+|++|++++|+
T Consensus 165 Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~A~ 244 (425)
T 3vcn_A 165 GYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGWDVHLLHDVHHRLTPIEAA 244 (425)
T ss_dssp TCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHH
Confidence 99999999984 0 4578999999999 589999999999999999999
Q ss_pred HHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHH
Q 014285 265 EVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGT 343 (427)
Q Consensus 265 ~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~ 343 (427)
+++++|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++
T Consensus 245 ~~~~~L~~~~i--~~iEqP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~ 318 (425)
T 3vcn_A 245 RLGKDLEPYRL--FWLEDSVPAENQAGFRLIRQ----HTTTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNL 318 (425)
T ss_dssp HHHHHHGGGCC--SEEECCSCCSSTTHHHHHHH----HCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHH
T ss_pred HHHHHHHhcCC--CEEECCCChhhHHHHHHHHh----cCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHH
Confidence 99999999997 49999999999999999986 68999999999999999999999999999999999997 9999
Q ss_pred HHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccC
Q 014285 344 LQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLK 422 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d 422 (427)
++++++|+++|+++++|++. +|+|+++|++|++++++|+.+.|++.+....++++.+++.++||++.+|++||||||+|
T Consensus 319 ~~ia~~A~~~gi~~~~h~~~~~s~ig~aA~~hlaaa~pn~~~~e~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGveld 398 (425)
T 3vcn_A 319 KKIAAFADLHHVKTGCHGATDLSPVTMAAALHFDMSITNFGLQEYMRHTPETDAVFPHAYTFSDGMLHPGDKPGLGVDID 398 (425)
T ss_dssp HHHHHHHGGGTCEECCCCCTTSCHHHHHHHHHHHHTCSCBCCEECCCCCHHHHHHSCBCCEEETTEEECCSSSBTSBCCC
T ss_pred HHHHHHHHHcCCEEeeccCCcccHHHHHHHHHHHHhCCCCceEeecCcchhhhhhcCCCceeeCCEEECCCCCCCCCcCC
Confidence 99999999999999999997 79999999999999999998888876554556778888999999999999999999999
Q ss_pred CCcC
Q 014285 423 WTIV 426 (427)
Q Consensus 423 ~~~v 426 (427)
+++|
T Consensus 399 ~~~l 402 (425)
T 3vcn_A 399 EDLA 402 (425)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 57
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=100.00 E-value=7.3e-67 Score=534.20 Aligned_cols=340 Identities=15% Similarity=0.175 Sum_probs=300.4
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~ 142 (427)
.||||+|+++.++-. ..+.++|||+||+|++||||+.+.. +.+ .....+++ +.|.|+|+++.
T Consensus 26 ~mkIt~v~~~~~~~~-------------~~~~v~V~v~td~Gi~G~GE~~~~~--~~~--~~~~~i~~~l~p~LiG~dp~ 88 (422)
T 3tji_A 26 PVIIKNIECFITRPD-------------RHNLVTVRVTTEQGITGHGCATFQQ--RPL--AVKTLVDEYLQPLMIGRDAN 88 (422)
T ss_dssp CCBEEEEEEEEECSS-------------SSCEEEEEEEETTSCCEEEECCCTT--SHH--HHHHHHHHTHHHHHTTSBTT
T ss_pred CcEEEEEEEEEEcCC-------------CccEEEEEEEECCCCEEEEeccCCC--CHH--HHHHHHHHHHHHHhCCCCcc
Confidence 399999999765210 1267999999999999999997532 222 22233555 89999999999
Q ss_pred CHHHHHHHHHHHC--C-CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhc
Q 014285 143 TLNFALDEIARIL--P-GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKL 218 (427)
Q Consensus 143 ~~~~~~~~l~~~~--~-g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~ 218 (427)
+++.+|+.|++.. . |...+++++|||||||||+||.+|+|||+||||. ++++|+|.+++..+++++.+++++++++
T Consensus 89 ~ie~~~~~l~~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~ 168 (422)
T 3tji_A 89 NIEDLWQMMNVNAYWRNGPLMNNAISGVDMALWDIKGQLAGMPLYQLFGGKSRDAIPAYSHASGETLEALFASVDALIAQ 168 (422)
T ss_dssp CHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSCEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCCCCeEEEEEEeCCCCHHHHHHHHHHHHHc
Confidence 9999999998742 2 2234679999999999999999999999999997 7899999988888999999999999999
Q ss_pred CCcEEEEeccCC------------------------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhC
Q 014285 219 GFSTLKLNVGRN------------------------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDM 273 (427)
Q Consensus 219 Gf~~iKlKiG~~------------------------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~ 273 (427)
||++||+|+|.+ ++.|++++++||+ .++++.|+||+|++|++++|++++++|+++
T Consensus 169 G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~Le~~ 248 (422)
T 3tji_A 169 GYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHERLFPQQAVQLAKQLEPF 248 (422)
T ss_dssp TCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred CCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 999999999853 4678999999999 589999999999999999999999999999
Q ss_pred CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHH
Q 014285 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRK 352 (427)
Q Consensus 274 ~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~ 352 (427)
++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|++
T Consensus 249 ~i--~~iEqP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~lA~a 322 (422)
T 3tji_A 249 QP--YFIEDILPPQQSAWLEQVRQ----QSCVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAHLCQA 322 (422)
T ss_dssp CC--SEEECCSCGGGGGGHHHHHH----HCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHH
T ss_pred CC--CeEECCCChhhHHHHHHHHh----hCCCCEEEeCCcCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHH
Confidence 97 49999999999999999986 68999999999999999999999999999999999997 9999999999999
Q ss_pred cCCcEEEcccC-chhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 353 SGLHLMIDGMI-ETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 353 ~gi~~~~~s~~-es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|+++++|++. +|+|+++|++|++++++|+.+.|+..+....++++.+++.++||++.+|++||||||+|++++
T Consensus 323 ~gv~v~~h~~~~~s~Ig~aA~~hlaaa~pn~~~~e~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 397 (422)
T 3tji_A 323 FGVRLAWHGPGDMTPIGVAVNTHLNIHLHNAAIQEFIPRSATTNDVFPGAPEVKEGFVYPPVQPGIGVGFNEALA 397 (422)
T ss_dssp TTCEECCCCCSSSCHHHHHHHHHHHHHCTTBCCEECCCCCHHHHHHSTTCCCCBTTEECCCCSSBSCCCCCHHHH
T ss_pred cCCEEEecCCCCccHHHHHHHHHHHHhCCCCceEeccCcchhhhhccCCCceeECCEEECCCCCcCCCCcCHHHH
Confidence 99999999985 799999999999999999988888765444567778888999999999999999999999865
No 58
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=100.00 E-value=4.6e-66 Score=520.92 Aligned_cols=348 Identities=22% Similarity=0.336 Sum_probs=313.5
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHH-HHHHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTK-ALVKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~-~~~~~~~-~~~~l~g~~ 140 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+| +|.+||||+.+. |.|+++..+ ....+++ +.|.|+|++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-dG~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l~G~d 79 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLFG-EGLEGLGEGVMERLPLYREETVAGARYLLEEVFLPRVLGRD 79 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEECCCBSSCSSSSCBHHHHHHHHHHTHHHHHTTCB
T ss_pred CEEEEEEEEEEeccccCCEEEeeEEEeeCcEEEEEEEE-CCeEEEEEeccCCCCcccCCCHHHHHHHHHHHHHHHHcCCC
Confidence 79999999999999999999999999999999999999 599999999875 556665433 3334555 889999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC-CCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA-VSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~-~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+++.+.. +.|. +++++||||||||++||..|+|||+||||.++++|++++++. .+++++.+.+++++++|
T Consensus 80 ~~~~~~l~~~~~~-~~g~--~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~~~~~~~g~~~~~~~~~~~a~~~~~~G 156 (369)
T 2zc8_A 80 LPNPEALREALAP-FRGN--PMAKAVLEMAFFDLWAKALGRPLWQVLGGVRQAVEVGVSLGIQPSVEDTLRVVERHLEEG 156 (369)
T ss_dssp CSSHHHHHHHHTT-SCSC--HHHHHHHHHHHHHHHHHHTTSBHHHHHTCCCSEEEBCEEECCCSSHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHH-hcCC--hHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceeceEEecCCCCHHHHHHHHHHHHHhh
Confidence 9999998887743 4443 568999999999999999999999999998888898888776 58999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
|+++|+|+|+ ++|++++++||+..|++.|++|+|++|++++ +++++.|+++++ .|||||++++|++++++|++
T Consensus 157 ~~~iKik~~~--~~d~~~v~avr~a~~~~~l~vDan~~~~~~~-~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~-- 229 (369)
T 2zc8_A 157 YRRIKLKIKP--GWDYEVLKAVREAFPEATLTADANSAYSLAN-LAQLKRLDELRL--DYIEQPLAYDDLLDHAKLQR-- 229 (369)
T ss_dssp CSCEEEECBT--TBSHHHHHHHHHHCTTSCEEEECTTCCCGGG-HHHHHGGGGGCC--SCEECCSCTTCSHHHHHHHH--
T ss_pred hheeeeecCh--hHHHHHHHHHHHHcCCCeEEEecCCCCCHHH-HHHHHHHHhCCC--cEEECCCCcccHHHHHHHHh--
Confidence 9999999974 7899999999995599999999999999999 999999999997 49999999999999999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++++++||+|++++++|++ +
T Consensus 230 --~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hla-a 306 (369)
T 2zc8_A 230 --ELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGMLEAGVGRAHNLHLA-T 306 (369)
T ss_dssp --HCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCCCCHHHHHHHHHHT-T
T ss_pred --hCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcEEecCccccHHHHHHHHHHH-c
Confidence 68999999999999999999999999999999999997 9999999999999999999999999999999999999 9
Q ss_pred cCCcce-eccCCC-cccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 379 LGCIKY-VNLNTP-FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 379 l~~~~~-~e~~~p-~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++|+.+ .|++.+ ..+.++++.+++.++||++.+|++||||+++|++++
T Consensus 307 ~~~~~~~~e~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 356 (369)
T 2zc8_A 307 LPGFTKPGDVSSASRYWEEDIVEEALEAKDGLMPVPEGVGIGVHLKLPFV 356 (369)
T ss_dssp STTBCSCBSCCCGGGTBSSCSBSSCCCCBTTEEECCCSSBTCCCBCHHHH
T ss_pred CCCCCcccccCCcchhhhhccccCCcEEECCEEECCCCCcCCcccCHHHH
Confidence 999888 788765 245678887888999999999999999999999865
No 59
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=100.00 E-value=1.1e-65 Score=518.08 Aligned_cols=347 Identities=21% Similarity=0.309 Sum_probs=312.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHH-HHHHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTK-ALVKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~-~~~~~~~-~~~~l~g~~ 140 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+|++| +||||+.+. |.|+++..+ ....+++ +.|.|+|++
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G-~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l~g~d 79 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-EGWGECVTMAGPLYSSEYNDGAEHVLRHYLIPALLAAE 79 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-EEEEECCCBSSSSSSSCBHHHHHHHHHHTHHHHHHHSS
T ss_pred CEEEEEEEEEEeccccCCeEeeeeEEecccEEEEEEEeCCC-EEEEEecCCCCCccccCcHHHHHHHHHHHHHHHHcCCC
Confidence 79999999999999999999999999999999999999999 999999875 456664433 3344555 789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC-CCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA-VSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~-~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+++.+.. +.|. +++++||||||||++||..|+|||+||||.++++|++++++. .+++++.+.+++++++|
T Consensus 80 ~~~~~~l~~~~~~-~~g~--~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~~~~~~~g~~~~~~~~~~~a~~~~~~G 156 (368)
T 1sjd_A 80 DITAAKVTPLLAK-FKGH--RMAKGALEMAVLDAELRAHERSFAAELGSVRDSVPCGVSVGIMDTIPQLLDVVGGYLDEG 156 (368)
T ss_dssp SCCHHHHHHHHTT-SCSC--HHHHHHHHHHHHHHHHHHTTCBHHHHHTCCCSEEEBEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHH-hcCC--HHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCccceEEeeCCCCHHHHHHHHHHHHHhC
Confidence 9999998887743 4443 568999999999999999999999999998888998888776 58999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHh
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNF 298 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~ 298 (427)
|+++|+|+|+ +.|++++++||+ .++++.|++|+|++|++++ +++++.|+++++ .|||||++++|++++++|++
T Consensus 157 f~~vKik~~~--~~~~e~v~avr~~~g~~~~l~vDan~~~~~~~-~~~~~~l~~~~i--~~iE~P~~~~~~~~~~~l~~- 230 (368)
T 1sjd_A 157 YVRIKLKIEP--GWDVEPVRAVRERFGDDVLLQVDANTAYTLGD-APQLARLDPFGL--LLIEQPLEEEDVLGHAELAR- 230 (368)
T ss_dssp CSEEEEECBT--TBSHHHHHHHHHHHCTTSEEEEECTTCCCGGG-HHHHHTTGGGCC--SEEECCSCTTCHHHHHHHHT-
T ss_pred ccEEEEecCc--hhHHHHHHHHHHhcCCCceEEEeccCCCCHHH-HHHHHHHHhcCC--CeEeCCCChhhHHHHHHHHH-
Confidence 9999999974 789999999999 5899999999999999999 999999999997 49999999999999999985
Q ss_pred hccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHh
Q 014285 299 ARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377 (427)
Q Consensus 299 ~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaa 377 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++++++||+|+++|++|++
T Consensus 231 ---~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hla- 306 (368)
T 1sjd_A 231 ---RIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCGGMIETGLGRAANVALA- 306 (368)
T ss_dssp ---TCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCCHHHHHHHHHHH-
T ss_pred ---hCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCcEEeCCccccHHHHHHHHHHH-
Confidence 68999999999999999999999999999999999997 9999999999999999999999999999999999999
Q ss_pred hcCCcce-eccCCC-cccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 378 GLGCIKY-VNLNTP-FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 378 al~~~~~-~e~~~p-~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++|+.+ .|++.+ ..+.+++ .+++.++||++.+|++||||+++|++.+
T Consensus 307 a~~~~~~~~e~~~~~~~~~~d~-~~~~~~~~G~~~~p~~PGlGv~~d~~~l 356 (368)
T 1sjd_A 307 SLPNFTLPGDTSASDRFYKTDI-TEPFVLSGGHLPVPTGPGLGVAPIPELL 356 (368)
T ss_dssp TSTTBCSCBSCCCGGGTCSSCS-SSCCCCSSSEEECCCSSBTSCCCCHHHH
T ss_pred cCCCCCcccccCCchhhhhhcC-CCCceEECCEEECCCCCcCCceeCHHHH
Confidence 9999888 788765 2456677 7888899999999999999999998865
No 60
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.3e-66 Score=522.52 Aligned_cols=348 Identities=21% Similarity=0.295 Sum_probs=314.8
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcc-hHHHHHHHHH-HhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGD-QTKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~-~~~~~~~~~~-~~~~l~g~~~~ 142 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+|++|++||||+.. ++ .. ....+++ ++|.|+|+++.
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~Ge~~~-----~~~~~-~~~~i~~~l~~~l~g~d~~ 77 (384)
T 2pgw_A 4 VKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGTVGIGECTV-----APDQT-GTAAILYRLAKHLVGHSPH 77 (384)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEEEC-----TTCHH-HHHHHHHHHHGGGTTSCGG
T ss_pred CEEEEEEEEEEecccCccceeccceeeeceEEEEEEEECCCCEEEEccCC-----CchHH-HHHHHHHHHHHHHCCCChh
Confidence 89999999999999999999999999999999999999999999999971 22 22 3444554 88999999999
Q ss_pred CHHHHHHH-HHHHC--CCC----hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHH
Q 014285 143 TLNFALDE-IARIL--PGS----EFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASK 214 (427)
Q Consensus 143 ~~~~~~~~-l~~~~--~g~----~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~ 214 (427)
+++.+|+. |++.. .|. ..+++++|||+||||++||..|+|||+||||. ++++|+|++++..+++++.+.+++
T Consensus 78 ~~~~~~~~~l~~~~~~~g~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~v~~~~~~~~~~~e~~~~~a~~ 157 (384)
T 2pgw_A 78 DVAPLIARIFHQEYLGHGANIMRAANQIFSGIDMAMWDLQGKLAGLPVHQLLGGAHRKAVGYFYFLQGETAEELARDAAV 157 (384)
T ss_dssp GHHHHHHHHHHHHTGGGTCCCHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTCCSSSEEEBCEECCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccccccccHHHHHHHHHHHHHHHHhHcCCCHHHHcCCCCCCceEEEEECCCCCHHHHHHHHHH
Confidence 99999999 85431 121 14689999999999999999999999999997 789999998887899999999999
Q ss_pred HhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHH
Q 014285 215 YCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHD 294 (427)
Q Consensus 215 ~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~ 294 (427)
++++||+.+|+|+|.+++.|++++++||+..+++.|+||+|++|++++|+++++.|+++++ .|||||++++|++++++
T Consensus 158 ~~~~Gf~~iKik~g~~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~~~~~~~~ 235 (384)
T 2pgw_A 158 GHAQGERVFYLKVGRGEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDI--EFIEQPTVSWSIPAMAH 235 (384)
T ss_dssp HHHTTCCEEEEECCSCHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCC--SEEECCSCTTCHHHHHH
T ss_pred HHHcCCCEEEECcCCCHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCC--CEEeCCCChhhHHHHHH
Confidence 9999999999999988899999999999953399999999999999999999999999997 49999999999999999
Q ss_pred HHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHH
Q 014285 295 VSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFAL 373 (427)
Q Consensus 295 L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~ 373 (427)
|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|+++||+|++++++
T Consensus 236 l~~----~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~ 311 (384)
T 2pgw_A 236 VRE----KVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHSSFTTGITTCAEH 311 (384)
T ss_dssp HHH----HCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCSCCHHHHHHHH
T ss_pred HHh----hCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeeccCcCCHHHHHHHH
Confidence 986 68999999999999999999999999999999999997 9999999999999999999999999999999999
Q ss_pred HHHhhcCCcce-ec-cCCCcccccCCCCC-ceeeeCcEEecCCCCCcccccCCCcC
Q 014285 374 HLAAGLGCIKY-VN-LNTPFLLSEDPFVG-GCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 374 hlaaal~~~~~-~e-~~~p~~~~~~~~~~-~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
|++++++|..+ .| +++|+ ..+++.+ ++.++||++.+|++||||+++|++++
T Consensus 312 hlaaa~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 365 (384)
T 2pgw_A 312 HIGLAIPNLDDGNQIMWQLV--QEDIVSSPDLTPKNGWLDAFRKPGLGFQLAEDLV 365 (384)
T ss_dssp HHHHHCSSBCSSBCCCGGGB--SSCSEEESCCCCBTTEEECCCSSBTCCEECHHHH
T ss_pred HHHHhCCCcccccccccCch--hhhhccCCCceEECCEEECCCCCcCCCcCCHHHH
Confidence 99999999876 45 55663 5777777 88899999999999999999999865
No 61
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=100.00 E-value=1.3e-65 Score=519.79 Aligned_cols=342 Identities=18% Similarity=0.228 Sum_probs=308.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~~ 143 (427)
|||++++++.+++|++.||+++.++++.++.++|+|+|++|.+||||+.. .+. .....+++ ++|.|+|+++.+
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~td~G~~G~GE~~g-----~~~-~~~~~i~~~l~~~l~G~d~~~ 77 (382)
T 2gdq_A 4 VKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECVD-----WLP-ALHVGFTKRIIPFLLGKQAGS 77 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECS-----CHH-HHHHHHHHTHHHHHTTSBTTC
T ss_pred CEEEEEEEEEEecccCcccccccceeccCcEEEEEEEECCCCEEEEeecC-----chH-HHHHHHHHHHHHHhcCCCccc
Confidence 89999999999999999999999999999999999999999999999972 111 23444565 899999999999
Q ss_pred HHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeec--CCCH---HHHHHHHHHHhh
Q 014285 144 LNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIP--AVSP---AEASELASKYCK 217 (427)
Q Consensus 144 ~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~--~~~~---~~~~~~~~~~~~ 217 (427)
++.+|+.|.+.. +++++|||+||||++||..|+|||+||||. ++++|+|.+++ ..++ +++.+.++++++
T Consensus 78 ~~~~~~~l~~~~-----~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~vp~~~~~g~~~~~~~~~e~~~~~a~~~~~ 152 (382)
T 2gdq_A 78 RLSLVRTIQKWH-----QRAASAVSMALTEIAAKAADCSVCELWGGRYREEIPVYASFQSYSDSPQWISRSVSNVEAQLK 152 (382)
T ss_dssp HHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHTTSBHHHHTTCCSCSEEEEEEECCCBCSSTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHcCCcHHHHcCCCCCCceeEEEEecccCCCcccHHHHHHHHHHHHH
Confidence 999999997542 679999999999999999999999999998 78999997653 3678 999999999999
Q ss_pred cCCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhC-CCCCceEeCCCCCCChhhHHH
Q 014285 218 LGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDM-GVIPVLFEQPVHRDDWSGLHD 294 (427)
Q Consensus 218 ~Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~-~l~~~~iEqP~~~~d~~~~~~ 294 (427)
+||+++|+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+++++.|+++ ++ .|||||++++|++++++
T Consensus 153 ~Gf~~vKik~g~~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i--~~iEqP~~~~d~~~~~~ 230 (382)
T 2gdq_A 153 KGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNI--GWLEEPLPFDQPQDYAM 230 (382)
T ss_dssp TTCCEEEEECSSSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCE--EEEECCSCSSCHHHHHH
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCC--eEEECCCCcccHHHHHH
Confidence 999999999997 89999999999999 589999999999999999999999999999 87 59999999999999999
Q ss_pred HHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHH
Q 014285 295 VSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFAL 373 (427)
Q Consensus 295 L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~ 373 (427)
|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++| +.||+++++|++
T Consensus 231 l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~-~~es~i~~~a~l 305 (382)
T 2gdq_A 231 LRS----RLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAH-AYDGSLSRLYAL 305 (382)
T ss_dssp HHT----TCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECCC-CSSCSHHHHHHH
T ss_pred HHh----hCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeec-CCCcHHHHHHHH
Confidence 985 68999999999999999999999999999999999997 999999999999999999999 889999999999
Q ss_pred HHHhhcCCcc-e-eccCCCcccccCCCCCcee------eeCcEEecCCCCCcccccCCCcC
Q 014285 374 HLAAGLGCIK-Y-VNLNTPFLLSEDPFVGGCE------VSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 374 hlaaal~~~~-~-~e~~~p~~~~~~~~~~~~~------~~~G~i~~p~~pGlGve~d~~~v 426 (427)
|++++++|.. + .+.+.| +.++++.+++. ++||++.+|++||||+++|++++
T Consensus 306 ~laa~~~~~~e~~~d~~~~--~~~d~~~~~~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 364 (382)
T 2gdq_A 306 FAQACLPPWSKMKNDHIEP--IEWDVMENPFTDLVSLQPSKGMVHIPKGKGIGTEINMEIV 364 (382)
T ss_dssp HHHHTSCCSSSCTTSCSCC--EEEECSSCGGGGGBCCCCBTTEEECCCSSBTSSCBCHHHH
T ss_pred HHHHhCchHhhcccccccc--HHHHHhcccccccccccccCCEEECCCCCCCCceeCHHHH
Confidence 9999999832 1 133344 35677778888 89999999999999999998865
No 62
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=100.00 E-value=5.1e-66 Score=530.31 Aligned_cols=340 Identities=14% Similarity=0.186 Sum_probs=299.8
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcC-CceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSN-GCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPP 141 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~-G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~ 141 (427)
.||||+|+++.++- - ..+.++|+|+||+ |++||||+.+.. ..+ .....+++ +.|.|+|+++
T Consensus 26 ~mkIt~v~~~~~~~-----~--------~~~~v~V~v~Td~~Gi~G~GE~~~~~--~~~--~~~~~i~~~l~p~LiG~dp 88 (440)
T 3t6c_A 26 NLFITNVKTILTAP-----G--------GIDLVVVKIETNEPGLYGLGCATFTQ--RIY--AVQSAIDEYLAPFLIGKDP 88 (440)
T ss_dssp CCCEEEEEEEEECT-----T--------SSCEEEEEEEESSTTCEEEEECCCGG--GHH--HHHHHHHTTHHHHHTTCCT
T ss_pred CCEEEEEEEEEECC-----C--------CceEEEEEEEEcCCCCEEEEeeccCC--CHH--HHHHHHHHHHHHHHcCCCh
Confidence 49999999976531 0 1267999999999 999999997532 221 22233555 8999999999
Q ss_pred CCHHHHHHHHHHHC--C-CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhh
Q 014285 142 TTLNFALDEIARIL--P-GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCK 217 (427)
Q Consensus 142 ~~~~~~~~~l~~~~--~-g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~ 217 (427)
.+++.+|+.|++.. . |...++|++|||||||||+||.+|+|||+||||. ++++|+|.+++..+++++.++++++++
T Consensus 89 ~~ie~i~~~~~~~~~~~~g~~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~ 168 (440)
T 3t6c_A 89 ARIEDIWQSAAVSGYWRNGPVMNNALSGIDMALWDIKGKQAGLPVYELLGGKCRDGIALYVHTDGADEVEVEDSARAKME 168 (440)
T ss_dssp TCHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSSEEEEEEECCSSHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccCCCcchhhHHHHHHHHHHHHHHHHcCCcHHHHcCCCCCCeeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999998752 2 2234679999999999999999999999999997 789999998888899999999999999
Q ss_pred cCCcEEEEeccCC-----------------------------------------chhhHHHHHHHHH-hCCCcEEEEeCC
Q 014285 218 LGFSTLKLNVGRN-----------------------------------------ITADFDVLQAIHA-VHPHCSFILDAN 255 (427)
Q Consensus 218 ~Gf~~iKlKiG~~-----------------------------------------~~~d~~~l~~ir~-~~~~~~L~vDAN 255 (427)
+||+++|+|+|.. ++.|++++++||+ .++++.|+||+|
T Consensus 169 ~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~d~~L~vDaN 248 (440)
T 3t6c_A 169 EGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHLRNKLGFSVELLHDAH 248 (440)
T ss_dssp TTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred cCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 9999999999841 4678999999999 579999999999
Q ss_pred CCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC
Q 014285 256 EGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 256 ~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
++|++++|++++++|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|+
T Consensus 249 ~~~~~~~A~~~~~~L~~~~i--~~iEeP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 322 (440)
T 3t6c_A 249 ERITPINAIHMAKALEPYQL--FFLEDPVAPENTEWLKMLRQ----QSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHI 322 (440)
T ss_dssp TCSCHHHHHHHHHHTGGGCC--SEEECSSCGGGGGGHHHHHH----HCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred CCCCHHHHHHHHHHhhhcCC--CEEECCCChhhHHHHHHHHh----hcCCCEEeCcccCCHHHHHHHHHcCCccceeech
Confidence 99999999999999999997 49999999999999999986 6899999999999999999999999999999999
Q ss_pred CCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCC
Q 014285 336 AKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTN 413 (427)
Q Consensus 336 ~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~ 413 (427)
+++| ++++++++++|+++|+++++|++. +|+|+++|++|++++++|+.+.|+..+.....+++.+++.++||++.+|+
T Consensus 323 ~~~GGit~~~~ia~~A~~~gi~~~~h~~~~~s~Ig~aa~~hlaaa~pn~~~~E~~~~~~~~~~~~~~~~~~~~G~i~vp~ 402 (440)
T 3t6c_A 323 SSIGGITPAKKIAIYSELNGVRTAWHSPGDISPIGVCANMHLDLSSPNFGIQEYTPMNDALREVFPGCPEVDQGYAYVND 402 (440)
T ss_dssp GGGTSHHHHHHHHHHHHHTTCEECCCCSSSSCHHHHHHHHHHHHHCTTBCCEECCCCCHHHHHHSTTCCEEETTEEECCC
T ss_pred hhhCCHHHHHHHHHHHHHcCCEEEeccCCCccHHHHHHHHHHHHhCCCCceEeecCcchhhHhhcCCCceecCCEEECCC
Confidence 9997 999999999999999999999986 79999999999999999998888776443445677888899999999999
Q ss_pred CCCcccccCCCcC
Q 014285 414 ARGQGGFLKWTIV 426 (427)
Q Consensus 414 ~pGlGve~d~~~v 426 (427)
+||||+|+|+++|
T Consensus 403 ~PGLGveld~~~l 415 (440)
T 3t6c_A 403 KPGLGIDINEALA 415 (440)
T ss_dssp CSBTSCCCCHHHH
T ss_pred CCCCCcccCHHHH
Confidence 9999999999875
No 63
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=100.00 E-value=6.7e-66 Score=520.77 Aligned_cols=348 Identities=19% Similarity=0.281 Sum_probs=302.9
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC--CCCCcchHH-HHHHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV--PLVTGDQTK-ALVKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~--~~~s~~~~~-~~~~~~~-~~~~l~g~~ 140 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+| +|++||||+.+. ++|+++..+ ....+++ +.|.|+|++
T Consensus 8 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~t-dG~~G~GE~~~~~~~~~~~e~~~~~~~~i~~~l~~~l~g~d 86 (375)
T 1r0m_A 8 FKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHG-EGVQGVAEGTMEARPMYREETIAGALDLLRGTFLPAILGQT 86 (375)
T ss_dssp EECCEEEEEEEEEEBC----------CEEEEEEEEEEE-TTEEEEEECCCBSSSSSSSCBHHHHHHHHHHTHHHHHTTCE
T ss_pred cEEEEEEEEEEeeecCCCeEecceEEeeccEEEEEEEE-CCeEEEEEEecCCCCcccCCCHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999 599999999865 556664433 3334554 789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC-CCHHHHHHHHHHHhhcC
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA-VSPAEASELASKYCKLG 219 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~-~~~~~~~~~~~~~~~~G 219 (427)
+.+++.+++.+.. +.|. +++++|||+||||++||..|+|||+||||.++++|++++++. .+++++.+.+++++++|
T Consensus 87 ~~~~~~l~~~~~~-~~g~--~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~~~~~~~g~~~~~~~~~~~a~~~~~~G 163 (375)
T 1r0m_A 87 FANPEAVSDALGS-YRGN--RMARAMVEMAAWDLWARTLGVPLGTLLGGHKEQVEVGVSLGIQADEQATVDLVRRHVEQG 163 (375)
T ss_dssp ESSHHHHHHTTTT-SCSC--HHHHHHHHHHHHHHHHHHHTCBHHHHHTCCCSEEEBCEEECCCSSHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHH-ccCc--hHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceeeeEEecCCCCHHHHHHHHHHHHHhc
Confidence 9999888876632 3443 468999999999999999999999999998888898888776 58999999999999999
Q ss_pred CcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 220 FSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 220 f~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
|+++|+|+|+ ++|++++++||+..|++.|++|+|++|++++ +++++.|+++++ .|||||++++|++++++|++
T Consensus 164 ~~~iKik~~~--~~d~~~v~avr~a~~~~~l~vDan~~~~~~~-~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~-- 236 (375)
T 1r0m_A 164 YRRIKLKIKP--GWDVQPVRATREAFPDIRLTVDANSAYTLAD-AGRLRQLDEYDL--TYIEQPLAWDDLVDHAELAR-- 236 (375)
T ss_dssp CSCEEEECBT--TBSHHHHHHHHHHCTTSCEEEECTTCCCGGG-HHHHHTTGGGCC--SCEECCSCTTCSHHHHHHHH--
T ss_pred ccEEEEecCh--HHHHHHHHHHHHHcCCCeEEEeCCCCCCHHH-HHHHHHHHhCCC--cEEECCCCcccHHHHHHHHH--
Confidence 9999999974 7899999999995599999999999999999 999999999997 49999999999999999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++++++||+|++++++|++ +
T Consensus 237 --~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~hla-a 313 (375)
T 1r0m_A 237 --RIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGGMLESGIGRAHNIHLS-T 313 (375)
T ss_dssp --HCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECCCCCCHHHHHHHHHHT-T
T ss_pred --hCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcEEecCccccHHHHHHHHHHH-c
Confidence 68999999999999999999999999999999999997 9999999999999999999999999999999999999 9
Q ss_pred cCCcce-eccCCC-cccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 379 LGCIKY-VNLNTP-FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 379 l~~~~~-~e~~~p-~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++|+.+ .|++.+ ..+.++++.+++.++||++.+|++||||+++|++++
T Consensus 314 ~~~~~~~~e~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 363 (375)
T 1r0m_A 314 LSNFRLPGDTSSASRYWERDLIQEPLEAVDGLMPVPQGPGTGVTLDREFL 363 (375)
T ss_dssp STTBCSCBSCCCGGGTBSSCSBSSCCCCBTTEEECCCSSBTSCCBCHHHH
T ss_pred CCCCCcccccCCchhhhhhhcccCCceEECCEEECCCCCcCCCccCHHHH
Confidence 999888 788765 245678887888999999999999999999999865
No 64
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=100.00 E-value=2.8e-66 Score=530.86 Aligned_cols=340 Identities=14% Similarity=0.188 Sum_probs=297.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~~ 143 (427)
++||+++.+.+.- ..++.++|||+||+|++||||+.+. ++++. ....+++ +.|.|+|++|.+
T Consensus 26 ~~It~v~~~~v~~-------------~~~~~vlV~v~Td~G~~G~GEa~~~--~~~~~--~~~~i~~~lap~LiG~dp~~ 88 (421)
T 4hnl_A 26 TIITDVKSFAIKP-------------DRHNLVVVKVETNKGISGLGCSTFQ--FRPLA--VKTVVDEYLRPLLMGRDANE 88 (421)
T ss_dssp CBEEEEEEEEECS-------------SSSCEEEEEEEETTSCCEEEECCCT--TSHHH--HHHHHHHTHHHHHTTCBTTC
T ss_pred ceEEEEEEEEECC-------------CCceEEEEEEEECCCCEEEEeccCC--CCHHH--HHHHHHHHHHHHHCCCChhh
Confidence 6799999876531 1246789999999999999999643 23322 2223444 789999999999
Q ss_pred HHHHHHHHHHHCC---CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 144 LNFALDEIARILP---GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 144 ~~~~~~~l~~~~~---g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
++.+|+.|+.... +....+|++||||||||++||.+|+|||+||||. ++++|+|.++...+++++.+.+++++++|
T Consensus 89 ie~i~~~~~~~~~~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLGG~~r~~v~~y~~~~~~~~~~~~~~a~~~~~~G 168 (421)
T 4hnl_A 89 IEDIWQVMNVNSYWRNGPITNNAISGIDMALWDIKGQLADMPLYQLLGGKARTAIPAYTHAVADNLDDLYHEIDRFLAAG 168 (421)
T ss_dssp HHHHHHHHHHTTSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSCEEEEEEEEESSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhccccCCchHHHHHHHHHHHHHHHHHHHhCCCHHHhcCCccCcccceecccCCCCHHHHHHHHHHHHHhh
Confidence 9999999976421 2234678999999999999999999999999997 68999999988889999999999999999
Q ss_pred CcEEEEeccC------------------------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCC
Q 014285 220 FSTLKLNVGR------------------------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMG 274 (427)
Q Consensus 220 f~~iKlKiG~------------------------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~ 274 (427)
|+++|+|+|. +++.|+++++++|+ .++++.|+||+|++|++++|+++++.|++++
T Consensus 169 ~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~~~~~~~A~~~~~~l~~~~ 248 (421)
T 4hnl_A 169 YRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHERLHPNQAIQFAKAAEPYQ 248 (421)
T ss_dssp CSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred HHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceEeccccccCCHHHHHHHHHHhhhhh
Confidence 9999999984 24679999999999 5899999999999999999999999999999
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHc
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKS 353 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~ 353 (427)
+ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++
T Consensus 249 i--~~iEeP~~~~d~~~~~~l~~----~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~ 322 (421)
T 4hnl_A 249 L--FFLEDILPPDQSHWLTQLRS----QSATPIATGELFNNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAM 322 (421)
T ss_dssp C--SEEECCSCGGGGGGHHHHHT----TCCCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHT
T ss_pred h--cccccCCcccchHHHHHHHh----cCCCCeecCcceehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHC
Confidence 7 59999999999999999985 78999999999999999999999999999999999997 99999999999999
Q ss_pred CCcEEEcccCc-hhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcCC
Q 014285 354 GLHLMIDGMIE-TRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIVS 427 (427)
Q Consensus 354 gi~~~~~s~~e-s~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v~ 427 (427)
|+++++|++.+ |+|+++|++|++++++|+.+.|........++++.+++.++||++.+|++||||||+|+|+|.
T Consensus 323 gi~v~~h~~~~~s~i~~aa~~hl~aa~~n~~~~e~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGLGveld~~~l~ 397 (421)
T 4hnl_A 323 GVRIAWHTPSDISPVGLAVNTHLNIHLHNAAIQETIELPANTQSVFVGSPQPKGGFFYPMEKSGIGITFDEEAAA 397 (421)
T ss_dssp TCEECCCCCSSSCHHHHHHHHHHHHHCTTBCCEECCCCCHHHHHHEECCCCCBTTEECCCCSSBSCCEECHHHHT
T ss_pred CCeEEEeCCcchhHHHHHHHHHHHHhCCCCccccccCcchhhhhhccCCCeEECCEEECCCCCCCCeeECHHHHh
Confidence 99999999986 789999999999999999888755433334566777888999999999999999999998763
No 65
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=100.00 E-value=2.7e-65 Score=513.43 Aligned_cols=343 Identities=19% Similarity=0.270 Sum_probs=310.1
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHH-HHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVR-EACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~-~~~~~l~g~~~~~ 143 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+|++|++||||+.+.+ ++.......++ .++|.|+|+++.+
T Consensus 4 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~v~v~td~G~~G~Ge~~~~~---~~~~~~~~~i~~~l~~~l~g~d~~~ 80 (359)
T 1mdl_A 4 VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYT---PVALKSLKQLLDDMAAMIVNEPLAP 80 (359)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECSS---GGGHHHHHHHHHHHHHHHTTSBSCH
T ss_pred CEEEEEEEEEEEcCCCCCccccccccccccEEEEEEEeCCCCEEEEEeecCC---CchHHHHHHHHHHHHHHHCCCCccc
Confidence 8999999999999999999999999999999999999999999999998753 22223334455 4889999999999
Q ss_pred HHHHHHHHHHHCC--C--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcC
Q 014285 144 LNFALDEIARILP--G--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLG 219 (427)
Q Consensus 144 ~~~~~~~l~~~~~--g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~G 219 (427)
++.+ +.|++... + ...+++++||||||||++||..|+|||+||||.++++|+|.+++..+++++.+.+++++++|
T Consensus 81 ~~~~-~~l~~~~~~~~~~~~~~~a~~aid~Al~Dl~~k~~g~Pl~~llGg~~~~vp~~~~~g~~~~~~~~~~a~~~~~~G 159 (359)
T 1mdl_A 81 VSLE-AMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELG 159 (359)
T ss_dssp HHHH-HHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCCCCCEEEEEECCSCHHHHHHHHHHHHHHTT
T ss_pred hHHH-HHHHHHHHhhccCchHHHHHHHHHHHHHHHhhhhcCCcHHHHhCCCCCCeeeeeecCCCCHHHHHHHHHHHHHcC
Confidence 9998 88876432 2 13578999999999999999999999999999988999998876678999999999999999
Q ss_pred CcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHH
Q 014285 220 FSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSN 297 (427)
Q Consensus 220 f~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~ 297 (427)
|+++|+|+|. +++.|++++++||+ .++++.|++|+|++|++++|+++++.|+++++ .|||||++++|++++++|++
T Consensus 160 f~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iE~P~~~~~~~~~~~l~~ 237 (359)
T 1mdl_A 160 FRAVKTRIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGV--TWIEEPTLQHDYEGHQRIQS 237 (359)
T ss_dssp CSEEEEECCCSSHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTC--SCEECCSCTTCHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCC--CeEECCCChhhHHHHHHHHH
Confidence 9999999997 89999999999999 58999999999999999999999999999997 49999999999999999986
Q ss_pred hhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHH
Q 014285 298 FARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLA 376 (427)
Q Consensus 298 ~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hla 376 (427)
++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|++ ++ +++|++
T Consensus 238 ----~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~~~-~~-----a~~~la 307 (359)
T 1mdl_A 238 ----KLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLF-QE-----ISAHLL 307 (359)
T ss_dssp ----TCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCBSC-HH-----HHHHHH
T ss_pred ----hCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeeccH-HH-----HHHHHH
Confidence 68999999999999999999999999999999999998 99999999999999999999985 33 899999
Q ss_pred hhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 377 AGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 377 aal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++++.++|++ | +..+++.+++.++||++.+|++||||+++|++++
T Consensus 308 aa~~~~~~~e~~-~--~~~d~~~~~~~~~~G~~~~p~~pGlGv~~d~~~l 354 (359)
T 1mdl_A 308 AATPTAHWLERL-D--LAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEI 354 (359)
T ss_dssp HTCTTBCCEEEC-C--SSTTTBCCCSEEETTEEECCSSSBTCCCBCHHHH
T ss_pred HhCCCCcccccC-c--hhhhhccCCceeECCEEECCCCCCCCccCCHHHH
Confidence 999999888877 5 3678888889999999999999999999999865
No 66
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=6.4e-66 Score=520.33 Aligned_cols=341 Identities=17% Similarity=0.177 Sum_probs=302.1
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHH-HHhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVR-EACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~-~~~~~l~g~~~~ 142 (427)
.|||++++++.+++|++.||.++.++++.++.++|+|+|+ |.+||||+.+. + .....++ .++|.|+|+++.
T Consensus 5 ~mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td-G~~G~Ge~~~~-----~--~~~~~i~~~l~~~l~g~d~~ 76 (372)
T 3cyj_A 5 GPRVERLEVSAYTVPTDYPESDGTLQWDSTTMILVEAHGG-GRKGLGYTYGD-----V--SVGRFVESKLAGVAEGSDAL 76 (372)
T ss_dssp -CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEET-TEEEEEEEESC-----T--HHHHHHHHHTHHHHTTSBTT
T ss_pred CCEEeEEEEEEEeccCCCcccCcccccccccEEEEEEEeC-CcEEEEeccCc-----H--HHHHHHHHHHHHHHcCCCcc
Confidence 3899999999999999999999999999999999999999 99999999751 1 1223343 478999999999
Q ss_pred CHHHHHHHHHHHCCC----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCC--CHHHHHHHHHHHh
Q 014285 143 TLNFALDEIARILPG----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV--SPAEASELASKYC 216 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~--~~~~~~~~~~~~~ 216 (427)
+++.+|+.|.+.+.+ ...+++++|||+||||++||..|+|||+||||.++++|+|.+++.. +++++.+++++++
T Consensus 77 ~~~~i~~~l~~~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~~~vp~~~~~g~~~~~~~~~~~~a~~~~ 156 (372)
T 3cyj_A 77 SPPAVWARMQAAIRNAGRPGVGAMAVSAVDIALWDLKARLLGLPLADALPRFHAEVPVYGSGGFTSYPLRRLQEQLGGWA 156 (372)
T ss_dssp CHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSCCCCSSEEEEEECCCTTSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhhhHcCCcHHHHhCCCCCCceEEEEcCCCCCCHHHHHHHHHHHH
Confidence 999999999876432 2346899999999999999999999999999998999999987765 4577989999999
Q ss_pred hcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhC-CCCCceEeCCCCCCChhhHHH
Q 014285 217 KLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDM-GVIPVLFEQPVHRDDWSGLHD 294 (427)
Q Consensus 217 ~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~-~l~~~~iEqP~~~~d~~~~~~ 294 (427)
++||+++|+|+|.++++|++++++||+ .+|++.|+||||++|++++|+++++.|+++ ++ .|||||++++|++++++
T Consensus 157 ~~G~~~~KiKvG~~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~~~~a~~~~~~l~~~~~i--~~iEqP~~~~d~~~~~~ 234 (372)
T 3cyj_A 157 AAGIPRVKMKVGREPEKDPERVRAAREAIGESVELMVDANGAYTRKQALYWAGAFAREAGI--SYLEEPVSSEDREGLRL 234 (372)
T ss_dssp HTTCCEEEEECCSSGGGHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHHHHHCC--CEEECSSCTTCHHHHHH
T ss_pred HcCCCEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhcCC--cEEECCCCcccHHHHHH
Confidence 999999999999999999999999999 589999999999999999999999999999 97 49999999999999999
Q ss_pred HHHhhccccC--CeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHH
Q 014285 295 VSNFARDTYG--ISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGF 371 (427)
Q Consensus 295 L~~~~r~~~~--iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a 371 (427)
|++ +++ +||++||++.+..+++++ .+++|++|+|++++| ++++++++++|+++|+++++|++ .++
T Consensus 235 l~~----~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~------~~a 302 (372)
T 3cyj_A 235 LRD----RGPGGVAIAAGEYEWTLPQLHDL--AGCVDILQADVTRCGGITGLLRVDGICRGHQIPFSAHCA------PAV 302 (372)
T ss_dssp HHH----HSCTTCEEEECTTCCSHHHHHHH--HTTCSEEEECTTTTTHHHHHTTHHHHHHHHTCCEEECSC------HHH
T ss_pred HHH----hCCCCCCEECCCCccCHHHHHHH--hCCCCEEecCchhhCCHHHHHHHHHHHHHcCCeecccch------HHH
Confidence 986 566 799999999999999988 789999999999997 99999999999999999999997 357
Q ss_pred HHHHHhhcCCcceeccC-CCcccccCCCCCceeeeCcEEecC-CCCCcccccCCCcC
Q 014285 372 ALHLAAGLGCIKYVNLN-TPFLLSEDPFVGGCEVSGAIYNFT-NARGQGGFLKWTIV 426 (427)
Q Consensus 372 ~~hlaaal~~~~~~e~~-~p~~~~~~~~~~~~~~~~G~i~~p-~~pGlGve~d~~~v 426 (427)
++|++++++++.+.|+. .+..+..+++.+++.++||++.+| ++||||+++|++++
T Consensus 303 ~lhlaaa~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~p~~~PGlGv~~d~~~l 359 (372)
T 3cyj_A 303 SAHACCAVESLLHLEYFHDHARVERLLFDGTLDPEGGSLRPDPDRPGLGLELKRSEA 359 (372)
T ss_dssp HHHHGGGCTTEEEEEEEHHHHHHHHHHEECCCCCGGGEECCCTTSCBTCCEECHHHH
T ss_pred HHHHHHhCCCCceeeccCCchhhhhHhhcCCCcccCcEEEcCCCCCcccceECHHHH
Confidence 89999999998777743 222234566677888999999999 99999999999865
No 67
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=100.00 E-value=5.6e-65 Score=513.31 Aligned_cols=345 Identities=19% Similarity=0.279 Sum_probs=307.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeE-EeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHH-HHhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSV-ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVR-EACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~-~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~-~~~~~l~g~~~~ 142 (427)
|||++++++.+++|++.||+++.+++ +.++.++|+|+|++|++||||+.+.+. +. ......++ .++|.|+|+++.
T Consensus 2 ~kI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~V~v~td~G~~G~Ge~~~~g~-~~--~~~~~~i~~~l~~~l~G~d~~ 78 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTVNH-GG--AAVATMVDKDLRGCLLGADAE 78 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEESS-SH--HHHHHHHHHTTHHHHTTSCTT
T ss_pred CceEEEEEEEEeccCCCCCccccccccCcceEEEEEEEECCCCEEEEeecCCCC-ch--HHHHHHHHHHHHHHhcCCCcc
Confidence 58999999999999999999999988 899999999999999999999987522 11 12223344 388999999999
Q ss_pred CHHHHHHHHHHHCCC----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC--CCHHHHHHHHHHHh
Q 014285 143 TLNFALDEIARILPG----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA--VSPAEASELASKYC 216 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~--~~~~~~~~~~~~~~ 216 (427)
+++.+|+.|.+...+ ...+++++||||||||++||..|+|||+||||.++++|+|.+++. .+++++.+.+++++
T Consensus 79 ~~~~~~~~l~~~~~~~~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~v~~y~~~~~~~~~~e~~~~~a~~~~ 158 (371)
T 2ovl_A 79 QIEKIWQSMWWRLHYAGRGGHATSAISAVDIALWDLKGIRARTPLWKLFGGYDPVVPVYAGGIDLELPVADLKTQADRFL 158 (371)
T ss_dssp CHHHHHHHHHHHTCTTCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCSEEEEEEECCBTTSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCeeEEEeCCCcCCCHHHHHHHHHHHH
Confidence 999999999875432 234689999999999999999999999999999999999988654 38999999999999
Q ss_pred hcCCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHH
Q 014285 217 KLGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHD 294 (427)
Q Consensus 217 ~~Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~ 294 (427)
++||+.||+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+++++.|+++++ .|||||++++|++++++
T Consensus 159 ~~Gf~~iKik~g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~ 236 (371)
T 2ovl_A 159 AGGFRAIKMKVGRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDL--HWIEEPTIPDDLVGNAR 236 (371)
T ss_dssp HTTCSCEEEECCCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCC--SEEECCSCTTCHHHHHH
T ss_pred HcCCCEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC--CEEECCCCcccHHHHHH
Confidence 9999999999997 88999999999999 58999999999999999999999999999997 49999999999999999
Q ss_pred HHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHH
Q 014285 295 VSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFAL 373 (427)
Q Consensus 295 L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~ 373 (427)
|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|++.| +++
T Consensus 237 l~~----~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~~~~------a~~ 306 (371)
T 2ovl_A 237 IVR----ESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHGVHD------LTV 306 (371)
T ss_dssp HHH----HHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECSCHH------HHH
T ss_pred HHh----hCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEccccHHH------HHH
Confidence 986 67899999999999999999999999999999999997 9999999999999999999999754 799
Q ss_pred HHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 374 HLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 374 hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
|++++++++.++|+.. + +..+++.+++.++||++.+|++||||+++|++++
T Consensus 307 hlaaa~~~~~~~e~~~-~-~~~~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 357 (371)
T 2ovl_A 307 HALASVPHRTYMEAHG-F-GLHAYMAEPMAVTDGCVSAPDRPGHGVVLDFERL 357 (371)
T ss_dssp HHHTSCTTEEEEECC-----CGGGBSSCCCCBTTEEECCCSSBTCCCBCHHHH
T ss_pred HHHhhCCCCcccccCh-H-HHHHhccCCCeeeCCEEECCCCCCCCCccCHHHH
Confidence 9999999988888653 2 3466777888899999999999999999999865
No 68
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=100.00 E-value=4.7e-65 Score=522.41 Aligned_cols=349 Identities=20% Similarity=0.283 Sum_probs=307.0
Q ss_pred eeeEEEEEEEEEEeecccccccccee--EEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSS--VENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSP 140 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~--~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~ 140 (427)
.|||++++++.+++|++.||.++.++ .+.++.++|+|+|++|++||||+.+ +.+. ......+++ +.|.|+|++
T Consensus 38 ~MkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~v~V~v~td~G~~G~GE~~~--g~~~--~~~~~~i~~~l~p~liG~d 113 (428)
T 3bjs_A 38 DMKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGITGYGEAHP--GRSP--GAITSLIHNTIAPMLIGMK 113 (428)
T ss_dssp -CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCEEEEEECC--TTCH--HHHHHHHHHTTTTTTTTSB
T ss_pred CCEEeEEEEEEEecccCCcccccccccccccccEEEEEEEECCCCEEEEEecC--CCCH--HHHHHHHHHHHHHHhCCCC
Confidence 49999999999999999999999998 8889999999999999999999986 2221 223334554 789999999
Q ss_pred CCCHHHHHHHHHHHCC---C--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeec--CCCH-HHHHHHH
Q 014285 141 PTTLNFALDEIARILP---G--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIP--AVSP-AEASELA 212 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~---g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~--~~~~-~~~~~~~ 212 (427)
+.+++.+|+.|++... + ...+++++||||||||+.||..|+|||+||||.++++|+|.+.+ ..++ +++.+.+
T Consensus 114 ~~~~~~i~~~l~~~~~~~~~~~g~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg~~~~vp~~~sg~~~~~~~~e~~~~~a 193 (428)
T 3bjs_A 114 ATDCVGAWQRVHRMQLSSHGLGAGAALAISGIDMALWDIRGKAANMPLYELLGGSKRRIPAYAGGIALGYQPKESLAEEA 193 (428)
T ss_dssp TTCHHHHHHHHHHHTTTTTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCCCEEEEEESSCSCSCCHHHHHHHH
T ss_pred ccCHHHHHHHHHHhhhhccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCCCCCceeeeeeccccCCChHHHHHHHH
Confidence 9999999999966422 2 12568999999999999999999999999999988999997622 3578 9999999
Q ss_pred HHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhh
Q 014285 213 SKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSG 291 (427)
Q Consensus 213 ~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~ 291 (427)
++++++||+++|+|+|.+++.|++++++||+ .++++.|+||+|++|++++|+++++.|+++++ .|||||++++|+++
T Consensus 194 ~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i--~~iEqP~~~~d~~~ 271 (428)
T 3bjs_A 194 QEYIARGYKALKLRIGDAARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQA--GWLEEPFACNDFAS 271 (428)
T ss_dssp HHHHHHTCSEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTC--SCEECCSCTTCHHH
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCC--CEEECCCCccCHHH
Confidence 9999999999999999889999999999999 58999999999999999999999999999997 49999999999999
Q ss_pred HHHHHHhhccccC-CeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHH
Q 014285 292 LHDVSNFARDTYG-ISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLAT 369 (427)
Q Consensus 292 ~~~L~~~~r~~~~-iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~ 369 (427)
+++|++ +++ +||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++| +.||++++
T Consensus 272 ~~~l~~----~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~~gi~~~~~-~~es~i~~ 346 (428)
T 3bjs_A 272 YREVAK----ITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAYRIPINAH-SSATGLNH 346 (428)
T ss_dssp HHHHTT----TCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCCBCCB-CCSSHHHH
T ss_pred HHHHHH----hCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEec-CCCcHHHH
Confidence 999975 688 99999999999999999999999999999999997 999999999999999999999 88999999
Q ss_pred HHHHHHHhhcCCcceec----cCCCcccccCCCCCcee-eeCcEEecCCCCCcccccCCCcC
Q 014285 370 GFALHLAAGLGCIKYVN----LNTPFLLSEDPFVGGCE-VSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 370 ~a~~hlaaal~~~~~~e----~~~p~~~~~~~~~~~~~-~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++|++++++|+.+.| .+.| +.+ ++.+++. ++||++.+|++||||+++|++++
T Consensus 347 ~a~~hlaaa~~~~~~~E~~~~~~~~--~~~-~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 405 (428)
T 3bjs_A 347 AATIHFLAATENAGYFEACVSKFNP--FRD-MFGTSFEIGADGCVEPPDAPGLGIEVDESIF 405 (428)
T ss_dssp HHHHHHHHHCTTBCCEEEECCSSCT--TTS-TTTC-CCCCTTSEECCCCSSBTCCCCCGGGT
T ss_pred HHHHHHHHhCCCccceecccccccc--HHH-hccCCCeeeeCCEEECCCCCCCCCeECHHHH
Confidence 99999999999976654 2345 234 6677888 89999999999999999999986
No 69
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=100.00 E-value=2.9e-65 Score=519.81 Aligned_cols=334 Identities=19% Similarity=0.244 Sum_probs=290.0
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||++|+++.+ | . +.++|+|+||+|++||||+.+.. +.+. ....++.+.|.|+|++|.++
T Consensus 2 MkIt~i~~~~~--~--~------------~~~~V~v~td~G~~G~GE~~~~g--~~~~--~~~~i~~l~p~liG~dp~~~ 61 (405)
T 3rr1_A 2 VKITRLTTYRL--P--P------------RWMFLKVETDEGVTGWGEPVIEG--RART--VEAAVHELSDYLIGQDPSRI 61 (405)
T ss_dssp CCEEEEEEEEE--T--T------------TEEEEEEEETTSCEEEECCCCTT--CHHH--HHHHHHHHGGGTTTSCTTCH
T ss_pred CeEEEEEEEEE--C--C------------CEEEEEEEECCCCEEEEeCCCCC--CHHH--HHHHHHHHHHHHCCCCcccH
Confidence 89999999876 2 2 23999999999999999998642 1221 22335668999999999999
Q ss_pred HHHHHHHHHH--CCC-ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcCC
Q 014285 145 NFALDEIARI--LPG-SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLGF 220 (427)
Q Consensus 145 ~~~~~~l~~~--~~g-~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf 220 (427)
+.+|+.|++. ..| ...+++++|||||||||+||.+|+|||+||||. ++++|+|.+++..+++++.+++++++++||
T Consensus 62 e~~~~~l~~~~~~~g~~~~~~A~said~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~e~~~~~a~~~~~~G~ 141 (405)
T 3rr1_A 62 NDLWQTMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLGVPVYELLGGLVRDKMRTYSWVGGDRPADVIAGMKALQAGGF 141 (405)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSCEEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHhCCcHHHHhCccccCceeeeEeCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999874 233 234679999999999999999999999999997 789999999998999999999999999999
Q ss_pred cEEEEeccCC----------chhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh
Q 014285 221 STLKLNVGRN----------ITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW 289 (427)
Q Consensus 221 ~~iKlKiG~~----------~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~ 289 (427)
++||+ +|.+ +++|++++++||+. ++++.|+||+|++|++++|+++++.|+++++ .|||||++++|+
T Consensus 142 ~~iKl-~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i--~~iEeP~~~~d~ 218 (405)
T 3rr1_A 142 DHFKL-NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRP--LFIEEPVLAEQA 218 (405)
T ss_dssp CEEEE-ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCC--SCEECSSCCSST
T ss_pred CEEEE-ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCC--CEEECCCCcccH
Confidence 99999 7752 57899999999995 7999999999999999999999999999997 499999999999
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHH
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLA 368 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig 368 (427)
+++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++ +|+|+
T Consensus 219 ~~~~~l~~----~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi~v~~h~~-~s~i~ 293 (405)
T 3rr1_A 219 ETYARLAA----HTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDVALAPHCP-LGPIA 293 (405)
T ss_dssp HHHHHHHT----TCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTCEECCBCC-SCHHH
T ss_pred HHHHHHHh----cCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCCEEEeCCC-CcHHH
Confidence 99999985 78999999999999999999999999999999999997 99999999999999999999986 79999
Q ss_pred HHHHHHHHhhcCCcceeccC--CCcccccCCCC-----CceeeeCcEEecCCCCCcccccCCCcC
Q 014285 369 TGFALHLAAGLGCIKYVNLN--TPFLLSEDPFV-----GGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 369 ~~a~~hlaaal~~~~~~e~~--~p~~~~~~~~~-----~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++|++|++++++|+.+.|+. .+....++++. +++.++||++.+|++||||||+|+++|
T Consensus 294 ~aa~~hlaaa~pn~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~vp~~PGLGveld~~~l 358 (405)
T 3rr1_A 294 LAACLHVDFVSWNATLQEQSMGIHYNKGAELLDYVRNKADFALEGGYIRPPRLPGLGVDIDEALV 358 (405)
T ss_dssp HHHHHHHHHHCTTBCCEEECC--------CGGGGBSCGGGGCEETTEECCCCSSBTSCCBCHHHH
T ss_pred HHHHHHHHHhCCCceeeeeccccccccchhhhhhcccCCCceeeCCEEECCCCCcCCcccCHHHH
Confidence 99999999999998776532 22222334433 267889999999999999999999865
No 70
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=100.00 E-value=4.1e-65 Score=517.16 Aligned_cols=347 Identities=15% Similarity=0.222 Sum_probs=311.3
Q ss_pred eeEEEEEEEEEEeeccc--------------------cccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH
Q 014285 65 VDVQRAEGRELNVALSA--------------------PLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK 124 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~--------------------p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~ 124 (427)
|||++++++.+++|++. |++++.++.+.+ .++|+|+|++|++||||+.+.. ++. .
T Consensus 3 mkI~~i~~~~~~~pl~~~~~~~~~~~~~~~~~g~~~~p~~~~~~~~~~~-~~~V~v~td~G~~G~GE~~~~~---~~~-~ 77 (388)
T 2nql_A 3 SPIATVEVFTLTQPRKVPYLGALREGEVVNPNGYIVRKGNRTVYPTFDR-SVLVRMTTEAGTVGWGETYGIV---APG-A 77 (388)
T ss_dssp CCEEEEEEEEEEECCCSCCGGGCCSCCCCBGGGEEECTTTCCEEESSEE-EEEEEEEETTCCEEEEEEECSS---CHH-H
T ss_pred ceEeEEEEEEEeccCcccccccccccccccccccccCCccccccCccce-EEEEEEEECCCCEEEEEecCCC---CcH-H
Confidence 89999999999999999 999999888888 9999999999999999998752 222 3
Q ss_pred HHHHHHH-HhhHhcCCCCCCHHHHHHHHHH-H-C-CC--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeee
Q 014285 125 ALVKVRE-ACQFLRQSPPTTLNFALDEIAR-I-L-PG--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAI 198 (427)
Q Consensus 125 ~~~~~~~-~~~~l~g~~~~~~~~~~~~l~~-~-~-~g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~ 198 (427)
....+++ ++|.|+|+++.+++.+|+.|++ . . .+ ...+++++||||||||++||..|+|||+||||.++++|+|.
T Consensus 78 ~~~~i~~~l~~~l~G~d~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~~~vp~~~ 157 (388)
T 2nql_A 78 VAALINDLLAGFVIGRDASDPSAVYDDLYDMMRVRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLGGGVDSFPAYV 157 (388)
T ss_dssp HHHHHHHTHHHHHTTCCSSSHHHHHHHHHHHHGGGTCSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCCSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcccHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceEeeE
Confidence 3444564 8999999999999999999954 2 1 12 22578999999999999999999999999999988999999
Q ss_pred eec-CCCHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 199 TIP-AVSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 199 ~i~-~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
+++ ..+++++.+.+++++++||+++|+|+|. +++. ++++++||+ .++++.|+||+|++|++++|+++++.|+++++
T Consensus 158 ~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 236 (388)
T 2nql_A 158 SGLPERTLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDP 236 (388)
T ss_dssp ECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCC
T ss_pred EeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCC
Confidence 876 5789999999999999999999999996 7888 999999999 68999999999999999999999999999997
Q ss_pred CCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcC
Q 014285 276 IPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSG 354 (427)
Q Consensus 276 ~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~g 354 (427)
.|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++++|+++ | ++++++++++|+++|
T Consensus 237 --~~iEqP~~~~d~~~~~~l~~----~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g 309 (388)
T 2nql_A 237 --WFAEAPVWTEDIAGLEKVSK----NTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIGALAAEHG 309 (388)
T ss_dssp --SCEECCSCTTCHHHHHHHHT----SCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHHHHHHHHT
T ss_pred --CEEECCCChhhHHHHHHHHh----hCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHHHHHHHHHHHHHcC
Confidence 49999999999999999985 689999999999999999999999999999999999 9 999999999999999
Q ss_pred CcEEEcccCchhHHHHHHHHHHhhcCCc--cee-ccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 355 LHLMIDGMIETRLATGFALHLAAGLGCI--KYV-NLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 355 i~~~~~s~~es~ig~~a~~hlaaal~~~--~~~-e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|+++||+|++++++|++++++|+ .|. +++.| +.++++.+++.++||++.+|++||||+++|++++
T Consensus 310 ~~~~~h~~~es~i~~aa~~hlaa~~~~~~~e~~~d~~~~--~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 382 (388)
T 2nql_A 310 IDVIPHATVGAGIFLAASLQASSTLSMLKGHEFQHSIFE--PNRRLLDGDMDCREGRYHLPSGPGLGVRPSEAAL 382 (388)
T ss_dssp CEECCCCCSSCSHHHHHHHHHHTTCTTBCCEEECHHHHT--GGGGGEESCCEEETTEEECCCSSBTSCEECHHHH
T ss_pred CeEEeecCCCcHHHHHHHHHHHHhCCchhhhccccccch--HHHHhccCCCcccCCEEECCCCCCCCceECHHHH
Confidence 9999999999999999999999999986 232 34445 3567777888999999999999999999999865
No 71
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=100.00 E-value=1.2e-64 Score=514.22 Aligned_cols=353 Identities=14% Similarity=0.218 Sum_probs=308.7
Q ss_pred cCCcceeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcC
Q 014285 59 LTETFWVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQ 138 (427)
Q Consensus 59 ~~~~~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g 138 (427)
++..-.|||++|+++.+. |++.|+.++. .++.++|+|+|++|++||||+.+.++ ..+ .....+++++|.|+|
T Consensus 5 ~~~~~~MkI~~i~~~~~~-p~~~~~~~~~----~~~~~~V~v~td~G~~G~GE~~~~~~-~~~--~~~~~i~~l~p~l~G 76 (391)
T 2qgy_A 5 NQDISIGKLSRLKIWITD-NHLSDDQWSN----TKKFIIIKITTEDGIEGWGEAFSINF-REK--GIAIIIKELFREISN 76 (391)
T ss_dssp CTTCCCCCEEEEEEEEEC-CCBCGGGCSB----CCCCEEEEEEETTCCEEEEEECCCTT-THH--HHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEEEEEec-CccccccccC----CCcEEEEEEEECCCCEEEecccCCCC-ChH--HHHHHHHHHHHHhcC
Confidence 344444999999999995 7777665543 35679999999999999999987652 222 223345568999999
Q ss_pred CCCCCHHHHHHHHHH-H--CCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeee--eec-CCCHHHHHHH
Q 014285 139 SPPTTLNFALDEIAR-I--LPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAI--TIP-AVSPAEASEL 211 (427)
Q Consensus 139 ~~~~~~~~~~~~l~~-~--~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~--~i~-~~~~~~~~~~ 211 (427)
+++.+++.+|+.|.+ . ..|...+++++||||||||++||..|+|||+||||. ++++|+|. +++ ..+++++.+.
T Consensus 77 ~d~~~~~~i~~~l~~~~~~~~g~~~~~a~~aid~AlwDl~ak~~g~Pl~~llGg~~~~~vp~~~~g~~~~~~~~~~~~~~ 156 (391)
T 2qgy_A 77 IPNLSIKSFYNKISLLSDGHRGLDFSSATSAIEIALWDISGKLKNLPLNSLLTKSPKPNVPIYATCWSDLKKDTNDYLRQ 156 (391)
T ss_dssp CTTCCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHCSSCCSEEEEEEECCCSSCCCHHHHHHH
T ss_pred CChhHHHHHHHHHHhhhhhccCchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCcCCCcceEEecccCCCCCHHHHHHH
Confidence 999999999999976 3 223222789999999999999999999999999996 78999997 444 5689999999
Q ss_pred HHHHhhcCCcEEEEeccCC-chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh
Q 014285 212 ASKYCKLGFSTLKLNVGRN-ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW 289 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~~-~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~ 289 (427)
+++++++||+.||+|+|.+ ++.|++++++||+ .++++.|+||+|++|++++|+++++.|+++++ .|||||++++|+
T Consensus 157 a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~d~ 234 (391)
T 2qgy_A 157 IEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNP--YWIEEPVDGENI 234 (391)
T ss_dssp HHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCC--SEEECSSCTTCH
T ss_pred HHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCC--CeEeCCCChhhH
Confidence 9999999999999999987 6899999999999 68999999999999999999999999999997 499999999999
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCch-hH
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIET-RL 367 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es-~i 367 (427)
+++++|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|++ |+ +|
T Consensus 235 ~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~~-~~~~i 309 (391)
T 2qgy_A 235 SLLTEIKN----TFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHCW-NSMSV 309 (391)
T ss_dssp HHHHHHHH----HCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBCC-SCTTH
T ss_pred HHHHHHHh----hCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccCC-CCcHH
Confidence 99999986 68999999999999999999999999999999999997 99999999999999999999998 88 99
Q ss_pred HHHHHHHHHhhcCCcceeccCC-CcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 368 ATGFALHLAAGLGCIKYVNLNT-PFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 368 g~~a~~hlaaal~~~~~~e~~~-p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
++++++|++++++|+.+.|++. +..+..+++.+++.++||++.+|++||||+++|++++
T Consensus 310 ~~aa~~hlaaa~~~~~~~e~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 369 (391)
T 2qgy_A 310 SASAMLHVCSSIPNSEKAEIFPDYINFSKKFCELPFDIIDNKAHINKSAGLGIVIHEDIL 369 (391)
T ss_dssp HHHHHHHHHHHCTTBCCEEECGGGHHHHHTTBCCSEEEETTEEEECCSSBTCCCBCHHHH
T ss_pred HHHHHHHHHHhCCCCceEeecCccchhhHHHhcCCceeeCCEEECCCCCcCCccCCHHHH
Confidence 9999999999999998888764 2233478888889999999999999999999998865
No 72
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=2.2e-65 Score=518.91 Aligned_cols=333 Identities=17% Similarity=0.179 Sum_probs=290.2
Q ss_pred eeeEEEEEEEEEEeecccccccc--ceeE-EeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLG--LSSV-ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSP 140 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a--~~~~-~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~ 140 (427)
.|||++|+++++++|+++||.++ .|.. +.++.++|+|+|| |++|||||.+.. +++.|.|+|++
T Consensus 11 ~mkI~~i~~~~v~~pl~~~f~~s~~~g~~~~~~~~~~V~i~td-G~~G~GE~~~~~-------------~~l~~~liG~d 76 (392)
T 3v5c_A 11 DWKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSIHMT-------------PEWAEDVIGRR 76 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECCSCC-------------HHHHHTTTTCB
T ss_pred CcEEEEEEEEEEeeecCcccccccccCccCCCceeEEEEEEEc-CCEEEEeecCcH-------------HHHHHHhCCCC
Confidence 59999999999999999999964 7776 6789999999999 999999998631 24678999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCc-----eeeeee-ecCC---------C
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNS-----LSTAIT-IPAV---------S 204 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~-----ip~~~~-i~~~---------~ 204 (427)
+.++.. ..+....++++|||||||||+||.+|+|||+||||. +++ +|+|.+ ++.. +
T Consensus 77 ~~~~~~--------~~~~~~~~A~aaiD~ALwDl~gK~~g~Pv~~LLGG~~r~~~~~v~v~~y~~~~~~~~~~~~~~~~~ 148 (392)
T 3v5c_A 77 LLDLFD--------DRGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVSGAHLETGASLVVPCYDTSLYFDDLHLADERAA 148 (392)
T ss_dssp GGGGBC--------TTSCBCGGGHHHHHHHHHHHHHHHHTCBHHHHHSCCCSCCCCCEEEEEEEEEECBTTTTCCCHHHH
T ss_pred HHHHHh--------hccchHHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCCCcccccceEEEEEeecccccccccccccC
Confidence 876421 123344678999999999999999999999999998 455 898864 3322 3
Q ss_pred HHHHHHHHHHHhhcCCcEEEEeccCC---------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCC
Q 014285 205 PAEASELASKYCKLGFSTLKLNVGRN---------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMG 274 (427)
Q Consensus 205 ~~~~~~~~~~~~~~Gf~~iKlKiG~~---------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~ 274 (427)
+++|.+++++++++||++||+|+|.+ +++|++++++||+ ++|++.|+||||++|++++|++++++|++++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~~~~A~~~~~~L~~~~ 228 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVN 228 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTTTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCccccccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcCHHHHHHHHHhcccCC
Confidence 56788888888999999999999973 6899999999999 6999999999999999999999999999998
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhcc-ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHH
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARD-TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRK 352 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~-~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~ 352 (427)
+ .|||||++ +|++++++|++.++. .+++|||+||++. ..+++++++.+++|++|+|+++ | ++++++++++|++
T Consensus 229 l--~~iEeP~~-~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d~~~-GGitea~kia~~A~~ 303 (392)
T 3v5c_A 229 L--YWLEAAFH-EDEALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYDIIW-PGFTHWMELGEKLDA 303 (392)
T ss_dssp C--CEEECSSS-CCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCBTTT-BCHHHHHHHHHHHHH
T ss_pred C--eEEeCCCC-cCHHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeCCCC-CCHHHHHHHHHHHHH
Confidence 7 59999998 689999999863211 2689999999999 8999999999999999999999 6 9999999999999
Q ss_pred cCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 353 SGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 353 ~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+|+++++|++ +|+|++++++|++++++|+.+.|++.++. .+...+++.++||++.+|++||||||+|+++|
T Consensus 304 ~gv~~~~h~~-~s~i~~aa~~hlaaa~p~~~~~e~~~~~~--~~~~~~~~~~~~G~i~vp~~PGlGve~d~~~l 374 (392)
T 3v5c_A 304 HGLRSAPHCY-GNAYGIYASGHLSAAVRNFEFVEYDDITI--EGMDVSGYRIENGEIHVPATPGFGIVFDDELV 374 (392)
T ss_dssp TTCEECCBCC-SCTHHHHHHHHHGGGCTTBCCEEECCEEE--TTEECTTCEEETTEEEECCSSBTSCEECHHHH
T ss_pred cCCeEEecCC-CcHHHHHHHHHHHHhCCCCceEecccchh--hhccCCCCeeECCEEECCCCCCCCccCCHHHH
Confidence 9999999997 89999999999999999999998876542 34556788999999999999999999999875
No 73
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=100.00 E-value=8.2e-65 Score=519.61 Aligned_cols=339 Identities=16% Similarity=0.181 Sum_probs=291.7
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~~~ 142 (427)
.|||++++++.+. | .++.++|||+||+|++||||+.+. ++.......+++ +.|.|+|+++.
T Consensus 22 ~mkIt~v~~~~~~-----~---------~~~~v~V~v~td~Gi~G~GE~~~~----g~~~~~~~~l~~~l~p~LiG~dp~ 83 (426)
T 4e4f_A 22 SMKIVSAEVFVTC-----P---------GRNFVTLKITTDSGLTGLGDATLN----GRELPVASYLNDHVCPQLIGRDAH 83 (426)
T ss_dssp CCBEEEEEEEEEC-----S---------SSCEEEEEEEETTSCEEEEECCCT----TCHHHHHHHHHHTHHHHHTTSBTT
T ss_pred CcEEEEEEEEEEc-----C---------CCCEEEEEEEECCCCEEEEecccC----CCcHHHHHHHHHHHHHHHcCCChh
Confidence 4999999986542 1 246899999999999999998743 222222333444 78999999999
Q ss_pred CHHHHHHHHHHHC---CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhc
Q 014285 143 TLNFALDEIARIL---PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKL 218 (427)
Q Consensus 143 ~~~~~~~~l~~~~---~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~ 218 (427)
+++.+|+.|++.. .|...+++++|||||||||+||.+|+|||+||||. ++++|+|.+....+++++.+++++++++
T Consensus 84 ~ie~i~~~l~~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~~~~~~~~~~~~~~~~~~~~ 163 (426)
T 4e4f_A 84 QIEDIWQYFYKGAYWRRGPVTMSAISAVDMALWDIKAKAANMPLYQLLGGASRTGVMVYCHTTGHSIDEVLDDYAKHRDQ 163 (426)
T ss_dssp CHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCSSSSEEEEEEECCSSHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhhccccCCccchhhHHHHHHHHHHHhHhHcCCcHHHHcCCCCCCceeEeEeCCCCCHHHHHHHHHHHHHc
Confidence 9999999998753 23234679999999999999999999999999997 6789999987777899999999999999
Q ss_pred CCcEEEEeccCC-c----------------------------------hhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHH
Q 014285 219 GFSTLKLNVGRN-I----------------------------------TADFDVLQAIHA-VHPHCSFILDANEGYTSEE 262 (427)
Q Consensus 219 Gf~~iKlKiG~~-~----------------------------------~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~ 262 (427)
||++||+|+|.+ . +.+++++++||+ .++++.|+||+|++|++++
T Consensus 164 Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~a~G~d~~L~vDaN~~~~~~~ 243 (426)
T 4e4f_A 164 GFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRDKFGFNEHLLHDMHHRLTPIE 243 (426)
T ss_dssp TCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCSCHHH
T ss_pred CCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHH
Confidence 999999999842 1 124689999999 5899999999999999999
Q ss_pred HHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HH
Q 014285 263 AVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VL 341 (427)
Q Consensus 263 A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~ 341 (427)
|+++++.|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++
T Consensus 244 A~~~~~~L~~~~i--~~iEeP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit 317 (426)
T 4e4f_A 244 AARFGKSVEDYRL--FWMEDPTPAENQACFRLIRQ----HTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTTITHAGGIT 317 (426)
T ss_dssp HHHHHHHTGGGCC--SEEECCSCCSSGGGGHHHHT----TCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHH
T ss_pred HHHHHHHHhhcCC--CEEECCCChHHHHHHHHHHh----cCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 9999999999997 49999999999999999985 78999999999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHcCCcEEEcc-cCchhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccc
Q 014285 342 GTLQIIKATRKSGLHLMIDG-MIETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGF 420 (427)
Q Consensus 342 ~~~~~~~~A~~~gi~~~~~s-~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve 420 (427)
++++++++|+++|+++++|+ +.+|+|+++|++|++++++|+.+.|++.+.....+++.+++.++||++.+|++||||||
T Consensus 318 ~~~~ia~~A~~~gi~v~~h~~~~~s~i~~aa~~hlaaa~pn~~~~e~~~~~~~~~~~~~~~~~~~~G~i~~p~~PGLGve 397 (426)
T 4e4f_A 318 GMRRIADFASLYQVRTGSHGPSDLSPICMAAALHFDLWVPNFGVQEYMGYSEQMLEVFPHSWTFDNGYMHPGEKPGLGIE 397 (426)
T ss_dssp HHHHHHHHHHTTTCEEEECCCTTSCHHHHHHHHHHHHHCTTEEEEECCCCCHHHHHHSCCCCEEETTEEECCSSSBTCCC
T ss_pred HHHHHHHHHHHcCCEEeeeCCCCccHHHHHHHHHHHHhCCCceeEeecCcchhhHhhcCCCceeeCCEEECCCCCCCCcc
Confidence 99999999999999999997 45899999999999999999988888754221123456778999999999999999999
Q ss_pred cCCCcC
Q 014285 421 LKWTIV 426 (427)
Q Consensus 421 ~d~~~v 426 (427)
+|++++
T Consensus 398 ~de~~~ 403 (426)
T 4e4f_A 398 FDEKLA 403 (426)
T ss_dssp CCHHHH
T ss_pred cCHHHH
Confidence 999875
No 74
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=100.00 E-value=7.7e-65 Score=524.58 Aligned_cols=346 Identities=18% Similarity=0.218 Sum_probs=300.9
Q ss_pred eeeEEEEEEEEEEeeccccccccceeE-EeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSV-ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~-~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~ 142 (427)
.|||++|+++++..| +.+..++.+.. .....++|+|+||+|++||||+.. ++. ....++.+.|.|+|+++.
T Consensus 7 ~~~It~i~~~~v~~~-d~~~~~~~g~h~p~~~~~~V~i~td~Gi~G~GE~~~-----~~~--v~~~i~~l~p~LiG~d~~ 78 (470)
T 3p0w_A 7 TPRVTEMQVIPVAGR-DSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPG-----GEG--IRQALERVIPLVVGQSIG 78 (470)
T ss_dssp CCBEEEEEEEEEEEE-CCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC-----CHH--HHHHHHHTGGGTTTCBGG
T ss_pred CCeEEEEEEEEecCC-CcccccccccCCCcceEEEEEEEECCCCEEEEeCCC-----hHH--HHHHHHHHHHHhCCCChh
Confidence 489999999999999 77777776654 457899999999999999999853 122 223356689999999999
Q ss_pred CHHHHHHHHHHHCC-----C-------------------C-----hhhhHHHHHHHHHHHHHHhhCCCChhhhhC-CC-C
Q 014285 143 TLNFALDEIARILP-----G-------------------S-----EFASVRAGVEMALIDAVANSIDIPLWRLFG-GA-S 191 (427)
Q Consensus 143 ~~~~~~~~l~~~~~-----g-------------------~-----~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg-g~-~ 191 (427)
+++.+|+.|++.+. | . ...++++|||+|||||+||.+|+|||+||| |+ +
T Consensus 79 ~ie~i~~~~~~~~~~~~~~G~~~~~~~~~r~~~p~~~~g~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGgG~~r 158 (470)
T 3p0w_A 79 RTNGVLSSIRRALAGGGNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALLDLLGQFLEVPVAELLGAGQQR 158 (470)
T ss_dssp GHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHHHHTSBGGGTSTTSCCC
T ss_pred hHHHHHHHHHHHHhhcCCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCC
Confidence 99999999987642 1 0 023789999999999999999999999999 65 7
Q ss_pred Cceeeeeeec-----------------------------CCCHHHHHHHHHHHhh-cCCcEEEEeccC-CchhhHHHHHH
Q 014285 192 NSLSTAITIP-----------------------------AVSPAEASELASKYCK-LGFSTLKLNVGR-NITADFDVLQA 240 (427)
Q Consensus 192 ~~ip~~~~i~-----------------------------~~~~~~~~~~~~~~~~-~Gf~~iKlKiG~-~~~~d~~~l~~ 240 (427)
++||+|.+.. ..+++++.++++++++ +||++||+|+|. +.++|++++++
T Consensus 159 ~~v~~y~~~~~~gd~~~t~~~~~~~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~a 238 (470)
T 3p0w_A 159 DSAPMLAYLFYVGDRRKTDLPYLEGANGADDWLRLRHEAAMTPAAIARLAEAATERYGFADFKLKGGVMPGAEEMEAIAA 238 (470)
T ss_dssp SEEEBCEEECCBCCGGGSCSCCCCCCTTCCHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHH
T ss_pred CeEEEeeeeccccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 8999986531 2578999999999888 699999999996 78999999999
Q ss_pred HHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCC----hhhHHHHHHhhccccCCeEEecCCCCCH
Q 014285 241 IHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD----WSGLHDVSNFARDTYGISVVADESCRSL 316 (427)
Q Consensus 241 ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d----~~~~~~L~~~~r~~~~iPIa~dE~~~~~ 316 (427)
||+.+|++.|+||||++|++++|++++++|+++ + .|||||++++| ++++++|++ ++++|||+||++.+.
T Consensus 239 vRea~pd~~L~vDaN~~w~~~~Ai~~~~~Le~~-l--~~iEeP~~~~d~~~~~~~~~~l~~----~~~iPIa~dE~~~~~ 311 (470)
T 3p0w_A 239 IKARFPHARVTLDPNGAWSLNEAIALCKGQGHL-V--AYAEDPCGPEAGYSGREVMAEFKR----ATGIPTATNMIATDW 311 (470)
T ss_dssp HHHHCTTSEEEEECTTBBCHHHHHHHHTTCTTT-C--SEEESCBCCBTTBCHHHHHHHHHH----HHCCCEEESSSSCSH
T ss_pred HHHhCCCCeEEeeCCCCCCHHHHHHHHHhcccc-c--eeecCCCChhhccchHHHHHHHHh----cCCCCEEeCCccCCH
Confidence 999889999999999999999999999999998 6 59999999998 689999986 689999999999999
Q ss_pred HHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCccc--
Q 014285 317 NDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLL-- 393 (427)
Q Consensus 317 ~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~-- 393 (427)
.+++++++.+++|++|+|+ ++| ++++++++++|+++|+++++|++.|++|+++|++|++++++|. +.+++.++..
T Consensus 312 ~~~~~~l~~~a~div~~d~-~~GGit~a~kia~lA~a~gv~~~~h~~~e~~I~~aA~~hlaaa~pn~-~~~~d~~~~~~~ 389 (470)
T 3p0w_A 312 RQMGHAVQLHAVDIPLADP-HFWTMQGSVRVAQLCDEWGLTWGSHSNNHFDVSLAMFTHVAAAAPGN-ITAIDTHWIWQE 389 (470)
T ss_dssp HHHHHHHHTTCCSEEBCCH-HHHCHHHHHHHHHHHHHHTCCCBCCCCSCCHHHHHHHHHHHHTCCSC-CCCBCCCHHHHT
T ss_pred HHHHHHHHcCCCCEEEecC-ccCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCc-ceeecccccccc
Confidence 9999999999999999999 676 9999999999999999999999999999999999999999986 4455543321
Q ss_pred -ccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 394 -SEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 394 -~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
..+++.+++.++||++.+|++||||||+|+++|
T Consensus 390 ~~~~l~~~p~~~~dG~i~vP~~PGLGveld~~~l 423 (470)
T 3p0w_A 390 AQERLTREPLRIQGGHVAVPERPGLGIEIDMDRV 423 (470)
T ss_dssp TTCCCBSSCCCEETTEEECCSSSBTSCCBCHHHH
T ss_pred chhhhcCCCceeECCEEECCCCCCcCceeCHHHH
Confidence 246778888999999999999999999999875
No 75
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=3.8e-64 Score=509.15 Aligned_cols=340 Identities=16% Similarity=0.220 Sum_probs=301.9
Q ss_pred eeEEEEEEEEEEeecccccc---cc-ceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCC
Q 014285 65 VDVQRAEGRELNVALSAPLS---LG-LSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQS 139 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~---~a-~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~ 139 (427)
|||++++++.+++|++.||. ++ .++++.++.++|+|+|++|++|||||.+ +.. ....+++ ++|.|+|+
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~------~~~-~~~~i~~~l~~~l~g~ 73 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQEGHSFTAP------EIV-RPHVIEKFVKKVLIGE 73 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCEEEEEECG------GGG-CHHHHHHTHHHHHTTS
T ss_pred CeEeEEEEEEEecCCCCcccccccccccccccceEEEEEEEECCCCEEEEEecC------chH-HHHHHHHHHHHHHcCC
Confidence 79999999999999999998 87 6778889999999999999999999972 111 2333553 88999999
Q ss_pred CCCCHHHHHHHHHHH-C-C-CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeee--c------CCCHHHH
Q 014285 140 PPTTLNFALDEIARI-L-P-GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITI--P------AVSPAEA 208 (427)
Q Consensus 140 ~~~~~~~~~~~l~~~-~-~-g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i--~------~~~~~~~ 208 (427)
++.+++.+|+.|++. . . +...+++++||||||||++||..|+|||+||||.++++|+|.++ + ..+++++
T Consensus 74 d~~~~~~~~~~l~~~~~~~g~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~vp~~~~~~~g~~~~~~~~~~e~~ 153 (382)
T 1rvk_A 74 DHRDRERLWQDLAHWQRGSAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIGGYRDKVLAYGSIMCGDELEGGLATPEDY 153 (382)
T ss_dssp BTTCHHHHHHHHHHHHTTTTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHCCSCSEEEEEEEECCCCCCTTTTSSHHHH
T ss_pred ChHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhHhHhCCCHHHHhCCCCCcceecEEeccCccccccCCCHHHH
Confidence 999999999999653 2 1 22246899999999999999999999999999998899999543 3 4689999
Q ss_pred HHHHHHHhhcCCcEEEEeccC-------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE
Q 014285 209 SELASKYCKLGFSTLKLNVGR-------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF 280 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~-------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i 280 (427)
.+.+++++++||+++|+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+++++.|+++++ .||
T Consensus 154 ~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~i 231 (382)
T 1rvk_A 154 GRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGF--DWI 231 (382)
T ss_dssp HHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTC--SEE
T ss_pred HHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC--CEE
Confidence 999999999999999999996 78999999999999 58999999999999999999999999999997 499
Q ss_pred eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCC-HHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEE
Q 014285 281 EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRS-LNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 281 EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~-~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~ 358 (427)
|||++++|++++++|++ ++++||++||++.+ ..+++++++.+++|++++|++++| ++++++++++|+++|++++
T Consensus 232 E~P~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~ 307 (382)
T 1rvk_A 232 EEPMDEQSLSSYKWLSD----NLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECE 307 (382)
T ss_dssp ECCSCTTCHHHHHHHHH----HCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEE
T ss_pred eCCCChhhHHHHHHHHh----hCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEe
Confidence 99999999999999986 68999999999999 999999999999999999999997 9999999999999999999
Q ss_pred EcccCchhHHHHHHHHHHhhcCCcceeccC----------CCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 359 IDGMIETRLATGFALHLAAGLGCIKYVNLN----------TPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 359 ~~s~~es~ig~~a~~hlaaal~~~~~~e~~----------~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+| +.|++ ++|++++++++.+.|+. .|++ .++++ +++. +||++.+|++||||+++|++++
T Consensus 308 ~~-~~~~~-----~~~laaa~~~~~~~E~~~~~~~~~~~~~~~~-~~d~~-~~~~-~~G~~~~p~~PGlGv~~d~~~l 376 (382)
T 1rvk_A 308 VH-GNTAM-----NLHVVAATKNCRWYERGLLHPFLEYDDGHDY-LKSLS-DPMD-RDGFVHVPDRPGLGEDIDFTFI 376 (382)
T ss_dssp EC-CCSHH-----HHHHHHHCSSCCCEEEEEECTTSCGGGCCTT-BSSCS-SCBC-TTSEEECCSCSBTCCCBCHHHH
T ss_pred ec-CCCCH-----HHHHHHhCCccceeeeccccccccccccchh-HHhhc-cCCC-cCCEEECCCCCCCccccCHHHH
Confidence 99 67876 88999999998777654 3433 56777 7788 9999999999999999999865
No 76
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=100.00 E-value=1.2e-64 Score=521.12 Aligned_cols=346 Identities=16% Similarity=0.227 Sum_probs=299.8
Q ss_pred eeeEEEEEEEEEEeecccccccccee-EEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSS-VENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~-~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~ 142 (427)
.++|++|+++++..+ ..|..+..|. -.....++|+|+||+|++||||+.. ++. ....++.+.|.|+|+++.
T Consensus 4 ~~~It~v~~~~v~~~-d~~~~~~~g~~~~~~~~~iV~v~td~Gi~G~GE~~~-----~~~--v~~~i~~l~p~LiG~dp~ 75 (450)
T 3mzn_A 4 FPKITKMNVVPVAGE-DGFLLNLSGGHEPWFIRCVLVLEDESGNRGVGEIPS-----SEG--ILNGLEKCRSLVEGARVN 75 (450)
T ss_dssp CCBEEEEEEEEEEEE-CCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC-----CHH--HHHHHHHTHHHHTTCBGG
T ss_pred CCEEEEEEEEEeccc-CccccccccCCCCcceEEEEEEEECCCCEEEEeCCC-----cHH--HHHHHHHHHHHhCCCChh
Confidence 479999999999988 6666655554 3456788999999999999999853 121 223356689999999999
Q ss_pred CHHHHHHHHHHHCC-------CC------hhhhHHHHHHHHHHHHHHhhCCCChhhhhC--CC-CCceeeeeee------
Q 014285 143 TLNFALDEIARILP-------GS------EFASVRAGVEMALIDAVANSIDIPLWRLFG--GA-SNSLSTAITI------ 200 (427)
Q Consensus 143 ~~~~~~~~l~~~~~-------g~------~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg--g~-~~~ip~~~~i------ 200 (427)
+++.+|+.|++.+. |. ...++++|||+|||||+||.+|+|||+||| |+ +++||+|.+.
T Consensus 76 ~ie~i~~~~~~~~~~~~~g~~G~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLG~~G~~r~~v~~y~~~~~~gd~ 155 (450)
T 3mzn_A 76 EVKQVLSRARGLLAQGGPEERGRQTFDLRVAVHVITAIESALFDLFGQALGMPVADLLGQYGRQRDEVEALGYLFLLGDP 155 (450)
T ss_dssp GHHHHHHHHHHHHGGGCCCCCCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTCBGGGGSTTTCCCCSEEEBCEEEECBCCG
T ss_pred hHHHHHHHHHHHhhcccCCCcccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCcCceEEeeeeecccccc
Confidence 99999999987532 11 246799999999999999999999999999 54 7899997642
Q ss_pred -----------------------cCCCHHHHHHHHHHHhh-cCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCC
Q 014285 201 -----------------------PAVSPAEASELASKYCK-LGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDAN 255 (427)
Q Consensus 201 -----------------------~~~~~~~~~~~~~~~~~-~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN 255 (427)
+..+++++.++++++++ +||++||+|+|. +.++|++++++||+.+|++.|+||||
T Consensus 156 ~~t~~~~~s~~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~pd~~L~vDaN 235 (450)
T 3mzn_A 156 DKTDLPYPRVADPVDAWDEVRYREAMTPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEAFPEARLALDPN 235 (450)
T ss_dssp GGSSSCCCCCSSCCSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred ccccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 13479999999999887 699999999996 78999999999999889999999999
Q ss_pred CCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCC----hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEE
Q 014285 256 EGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD----WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVV 331 (427)
Q Consensus 256 ~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d----~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i 331 (427)
++|++++|+++++.|+++ + .|||||++++| +++|++|++ ++++|||+||++.+..+++++++.+++|++
T Consensus 236 ~~w~~~~A~~~~~~L~~~-i--~~iEeP~~~~d~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~di~ 308 (450)
T 3mzn_A 236 GAWKLDEAVRVLEPIKHL-L--SYAEDPCGQEGGFSGRETMAEFKK----RTGLPTATNMIATDYKQLQYAVQLNSVDIP 308 (450)
T ss_dssp TCBCHHHHHHHHGGGGGG-C--SEEESSBCCBTTBCHHHHHHHHHH----HHCCCEEESSSSSSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHhhhc-c--ceeeCCCCcccccchHHHHHHHHH----hcCCCEEeCCccCCHHHHHHHHHcCCCCEE
Confidence 999999999999999998 6 49999999998 689999986 689999999999999999999999999999
Q ss_pred EeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCcccc--cCCCCCceeeeCcE
Q 014285 332 NIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLLS--EDPFVGGCEVSGAI 408 (427)
Q Consensus 332 ~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~~--~~~~~~~~~~~~G~ 408 (427)
|+|+ ++| ++++++++++|+++|+++++|++.+++|+++|++|++++++|. +.+++.++... .+++.+++.++||+
T Consensus 309 ~~d~-~~GGit~a~kia~lA~a~gv~~~~h~~~~~~I~~aA~~hlaaa~p~~-~~~~d~~~~~~~~~~l~~~~~~~~~G~ 386 (450)
T 3mzn_A 309 LADC-HFWTMQGAVAVGELCNEWGMTWGSHSNNHFDISLAMMTHVAAACPGE-ITAIDTHWIWQDGQRITREPFQIRDGK 386 (450)
T ss_dssp BCCH-HHHCHHHHHHHHHHHHHTTCCCBCCCCSCCHHHHHHHHHHHHTCCSC-CCCBCCCHHHHTTCCSBSSCCCCBTTE
T ss_pred EecC-ccCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCc-chhhccccccccccccccCCCeEECCE
Confidence 9998 676 9999999999999999999999999999999999999999986 45566554322 36777888999999
Q ss_pred EecCCCCCcccccCCCcC
Q 014285 409 YNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 409 i~~p~~pGlGve~d~~~v 426 (427)
+.+|++||||||+|+++|
T Consensus 387 i~vp~~PGLGveld~~~l 404 (450)
T 3mzn_A 387 LTVPKTPGLGIELDDDKL 404 (450)
T ss_dssp EECCCSSBTSCCBCHHHH
T ss_pred EECCCCCcCCCccCHHHH
Confidence 999999999999999875
No 77
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=100.00 E-value=2e-64 Score=513.44 Aligned_cols=335 Identities=15% Similarity=0.157 Sum_probs=281.7
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||++|+++.++ ..++.++|||+||+|++||||+.. +++.... ...+.+.|.|+|++|.++
T Consensus 1 MkIt~ie~~~~~--------------~~~~~~~V~v~td~G~~G~GE~~~----~~~~~~~-~i~~~l~p~liG~dp~~~ 61 (400)
T 4dxk_A 1 MKITKLETVRVA--------------ERTNLLWVLVHTDEGITGLGETFF----GAETVET-YVHEYIAPRVIGRDPLQI 61 (400)
T ss_dssp CCEEEEEEEEET--------------TSTTEEEEEEEETTSCCEEEEEES----CHHHHHH-HHHHTHHHHHTTSCTTCH
T ss_pred CeEEEEEEEEEC--------------CCCCEEEEEEEECCCCEEEEcCCC----CccHHHH-HHHHHHHHHhCCCCcchH
Confidence 899999997764 124679999999999999999542 2222221 123458899999999999
Q ss_pred HHHHHHHHHHCCC----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecC-----------------
Q 014285 145 NFALDEIARILPG----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPA----------------- 202 (427)
Q Consensus 145 ~~~~~~l~~~~~g----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~----------------- 202 (427)
+.+|+.| ..+.| ...+++++|||||||||+||.+|+|||+||||. +++||+|.++..
T Consensus 62 ~~~~~~~-~~~~~~~~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~yas~~~~~~~~~~~~~~~~~~~~ 140 (400)
T 4dxk_A 62 DLLAQDL-VGYLGFRSSGAEVRGNSAFDIALWDIFGKATNQPIAQLLGGFSRREIRTYNTCAGTEYIKKATGQQTANYGL 140 (400)
T ss_dssp HHHHHHH-CCSSSCSSCSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSCEEEEBC--------------------
T ss_pred HHHHHHH-HHHhccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCCCccCceeEEEecccccccccccccccccccc
Confidence 9999999 43322 234679999999999999999999999999997 789999975431
Q ss_pred --CCHHH--------HHHHHHHHhhcCCcEEEEeccC--------------CchhhHHHHHHHHHh-CCCcEEEEeCCCC
Q 014285 203 --VSPAE--------ASELASKYCKLGFSTLKLNVGR--------------NITADFDVLQAIHAV-HPHCSFILDANEG 257 (427)
Q Consensus 203 --~~~~~--------~~~~~~~~~~~Gf~~iKlKiG~--------------~~~~d~~~l~~ir~~-~~~~~L~vDAN~~ 257 (427)
.++++ ..+.+++++++||++||+|+|. +++.|++++++||+. ++++.|+||+|++
T Consensus 141 ~~~~~~~~~~g~~~~~~~~a~~~~~~G~~~~Kik~g~~~~~~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~ 220 (400)
T 4dxk_A 141 SGGKDYDDLNGFLHRADELAHSLLEDGITAMKIWPFDAAAEKTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSM 220 (400)
T ss_dssp --------------CHHHHHHHHHHTTCCEEEECTTHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTC
T ss_pred cccccchhcccccccHHHHHHHHHHhCCCEEEEcCCCccccccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCC
Confidence 12222 2445667889999999999971 367899999999994 7899999999999
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
|++++|++++++|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|+++
T Consensus 221 ~~~~~A~~~~~~L~~~~i--~~iEeP~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~ 294 (400)
T 4dxk_A 221 WQLLPAMQIAKALTPYQT--FWHEDPIKMDSLSSLTRYAA----VSPAPISASETLGSRWAFRDLLETGAAGVVMLDISW 294 (400)
T ss_dssp BCHHHHHHHHHHTGGGCC--SEEECCBCTTSGGGHHHHHH----HCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTT
T ss_pred CCHHHHHHHHHHHhhcCC--CEEEcCCCcccHHHHHHHHH----hCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 999999999999999997 49999999999999999986 689999999999999999999999999999999999
Q ss_pred cc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceecc-CC-CcccccCCCCCceeeeCcEEecCCC
Q 014285 338 FG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNL-NT-PFLLSEDPFVGGCEVSGAIYNFTNA 414 (427)
Q Consensus 338 ~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~-~~-p~~~~~~~~~~~~~~~~G~i~~p~~ 414 (427)
+| ++++++++++|+++|+++++|++. |+|+++|++|++++++|+.+.|. +. ...+.++++.+++.++||++.+|++
T Consensus 295 ~GGit~~~kia~~A~~~gi~~~~h~~~-s~i~~aa~~hlaaa~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~i~~p~~ 373 (400)
T 4dxk_A 295 CGGLSEARKIASMAEAWHLPVAPHXCT-GPVVLCASTHLSLNAPNALVQESVRAFYKTWYRDLVTALPEVKNGMITVPPG 373 (400)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEC-CC-CHHHHHHHHHHHHHCTTBCCEECCTTC-CCTHHHHBSCCCEEETTEEECCSS
T ss_pred cCCHHHHHHHHHHHHHcCCEEEecCCC-ChHHHHHHHHHHHhCCCceeEEecccccchhhHhhcCCCCeeeCCEEECCCC
Confidence 97 999999999999999999999875 99999999999999999988773 31 1223456778888999999999999
Q ss_pred CCcccccCCCcC
Q 014285 415 RGQGGFLKWTIV 426 (427)
Q Consensus 415 pGlGve~d~~~v 426 (427)
||||+|+|++++
T Consensus 374 PGlGveld~~~l 385 (400)
T 4dxk_A 374 AGLGMELHPDIE 385 (400)
T ss_dssp SBTSCCBCTTGG
T ss_pred CCCCCcCCHHHH
Confidence 999999999976
No 78
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=100.00 E-value=1.3e-64 Score=515.72 Aligned_cols=345 Identities=15% Similarity=0.191 Sum_probs=298.1
Q ss_pred eeeEEEEEEEEEEeeccc----------------cccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHH
Q 014285 64 WVDVQRAEGRELNVALSA----------------PLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALV 127 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~----------------p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~ 127 (427)
.|||++|+.+.+..+-.. .+..+.++++.++.++|+|+||+|++||||+++.+. ....
T Consensus 22 ~m~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~lV~v~td~G~~G~GE~~~~~~------~~~~ 95 (412)
T 3stp_A 22 SMKIKSVRTRVWTWKGPTVPPQGNFCTNASDALWMKGDAMSSFRFHQWLTCEVETEDGTIGIGNAALAPS------VVKK 95 (412)
T ss_dssp -CCEEEEEEEEEEECSCCCCCCSSSCCCGGGGSCCCSCTTTTTCCCEEEEEEEEETTSCEEEEEECSSHH------HHHH
T ss_pred ccEEEEEEEEEEeccCCCCCCCCCCCCCchhccCCCCCcceEEEeccEEEEEEEECCCCEEEEeccCCHH------HHHH
Confidence 389999999998763211 133566777788899999999999999999965321 1223
Q ss_pred HHHH-HhhHhcCCCCCCHHHHHHHHHHHCC----CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee-
Q 014285 128 KVRE-ACQFLRQSPPTTLNFALDEIARILP----GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI- 200 (427)
Q Consensus 128 ~~~~-~~~~l~g~~~~~~~~~~~~l~~~~~----g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i- 200 (427)
.+++ +.|.|+|++|.+++.+|+.|++... +...+++++|||||||||+||.+|+|||+||||. ++++|+|.++
T Consensus 96 ~i~~~l~p~LiG~dp~~~e~l~~~~~~~~~~~g~~g~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~s~~ 175 (412)
T 3stp_A 96 VIDDWYAPLVIGEDPFDYAYIWEKMYRRSHAWGRKGIGMTAISAIDIAIWDLMGKLVGKPVFKLLGGRTKDRIPVYYSKL 175 (412)
T ss_dssp HHHHTTHHHHTTSCGGGHHHHHHHHHHHTHHHHSSTHHHHHHHHHHHHHHHHHHHHTTCBHHHHHTCCSSSSEEEEEECC
T ss_pred HHHHHHHHHHCCCCcchHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHhhhcCCCHHHhcCCCCCceEEEEEEec
Confidence 3455 7899999999999999999986531 1234679999999999999999999999999998 8899999984
Q ss_pred cCCCHHHHHHHHHHHhhcCCcEEEEeccCC-------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 201 PAVSPAEASELASKYCKLGFSTLKLNVGRN-------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~-------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
...+++++.+.+++++++||++||+|+|.+ ++.|++++++||+ +++++.|+||+|++|++++|++++++|++
T Consensus 176 ~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~ 255 (412)
T 3stp_A 176 YAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAP 255 (412)
T ss_dssp CSCCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGG
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 556899999999999999999999999863 5789999999999 58999999999999999999999999999
Q ss_pred CCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHH
Q 014285 273 MGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATR 351 (427)
Q Consensus 273 ~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~ 351 (427)
+++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+
T Consensus 256 ~~i--~~iEeP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGit~a~kia~~A~ 329 (412)
T 3stp_A 256 YEP--RWLEEPVIADDVAGYAELNA----MNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGITAAQKINAIAE 329 (412)
T ss_dssp GCC--SEEECCSCTTCHHHHHHHHH----TCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHH
T ss_pred cCC--CEEECCCCcccHHHHHHHHh----CCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCHHHHHHHHHHHH
Confidence 997 49999999999999999986 68999999999999999999999999999999999997 999999999999
Q ss_pred HcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccC------CCcccccCCCCCceeeeCcEEecCCC-CCcccccCCC
Q 014285 352 KSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLN------TPFLLSEDPFVGGCEVSGAIYNFTNA-RGQGGFLKWT 424 (427)
Q Consensus 352 ~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~------~p~~~~~~~~~~~~~~~~G~i~~p~~-pGlGve~d~~ 424 (427)
++|+++++|+ +.++++|++++.+|..+.|+. ....+.++++.+++.++||++.+|++ ||||+|+|++
T Consensus 330 a~gi~v~~h~------~~aa~~hlaaA~~~~~~~e~~~~~d~~~~~~l~~~~~~~~~~~~~G~i~vp~~~PGlGveld~~ 403 (412)
T 3stp_A 330 AAQIPVIPHA------GQMHNYHLTMANTNCPISEYFPVFDVEVGNELFYYIFEGDPEAVDGYLQLDDDLPGLGIAISDK 403 (412)
T ss_dssp HHTCCBCCSS------CSHHHHHHHHTCTTCCCEEECCCCSSSSSTTTHHHHEECCCCCBTTEECCCSSSCBTSCEECCT
T ss_pred HcCCEEEecc------HHHHHHHHHHhCCCCceEEecccccccccchhhhhhccCCCcccCCEEEcCCCCCcccccCCHH
Confidence 9999999998 457899999888887665543 22233455677788899999999999 9999999999
Q ss_pred cC
Q 014285 425 IV 426 (427)
Q Consensus 425 ~v 426 (427)
+|
T Consensus 404 ~l 405 (412)
T 3stp_A 404 HL 405 (412)
T ss_dssp TG
T ss_pred HH
Confidence 86
No 79
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=100.00 E-value=4.2e-64 Score=512.49 Aligned_cols=336 Identities=16% Similarity=0.189 Sum_probs=292.6
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTT 143 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~ 143 (427)
.|||++|+++.++.+ .++.++|+|+||+|++||||+.+. ++.+... ..++.+.|.|+|+++.+
T Consensus 2 ~MkI~~i~~~~~~~~-------------~~~~~~V~v~td~G~~G~GE~~~~--~~~~~~~--~~i~~l~p~liG~d~~~ 64 (409)
T 3go2_A 2 SLKVVSVDTLCCDAG-------------WRNYHFVKLTTDEGIVGWSEFDEG--FGSPGVT--AVIEQLGKRLVGASVME 64 (409)
T ss_dssp CCBEEEEEEEEEECS-------------SSEEEEEEEEETTCCEEEEEECST--TTCTTHH--HHHHHHHHHHTTSBTTC
T ss_pred CCEEEEEEEEEECCC-------------CccEEEEEEEECCCCEEEEeecCC--CCcHHHH--HHHHHHHHHhcCCChhh
Confidence 399999999877542 246799999999999999998753 3332222 23466899999999999
Q ss_pred HHHHHHHHHHHCC---CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee--------------cCCCH
Q 014285 144 LNFALDEIARILP---GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI--------------PAVSP 205 (427)
Q Consensus 144 ~~~~~~~l~~~~~---g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i--------------~~~~~ 205 (427)
++.+|+.|++... +...+++++|||||||||+||.+|+|||+||||. +++||+|++. +..++
T Consensus 65 ~e~~~~~~~~~~~~~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~s~~~~~~i~~~~~~~~~~~~~ 144 (409)
T 3go2_A 65 HERFFAEAYCLTRPATGGVVSEGIGAIENALLDAKAKTLNVPCYELLGGKLRDRVPVYWSHCPTWRINHPKFFGPPVTDL 144 (409)
T ss_dssp HHHHHHHHHHHHGGGCSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTCCSCSEEEEEECSTTHHHHHCTTTSSSCCCSH
T ss_pred HHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHhHHHcCCcHHHHcCCCCCCeEEEEEeecCccccccccccccCCCCH
Confidence 9999999987532 2235679999999999999999999999999997 7999999653 34689
Q ss_pred HHHHHHHHHHhhcCCcEEEEec-------------cCC-------------chhhHHHHHHHHH-hCCCcEEEEeCCCCC
Q 014285 206 AEASELASKYCKLGFSTLKLNV-------------GRN-------------ITADFDVLQAIHA-VHPHCSFILDANEGY 258 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKi-------------G~~-------------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~ 258 (427)
+++.+.+++++++||++||+|+ |.+ ++.|++++++||+ +++++.|+||+|++|
T Consensus 145 e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN~~~ 224 (409)
T 3go2_A 145 DGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLNFNA 224 (409)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 9999999999999999999999 521 3467899999999 589999999999999
Q ss_pred CHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc
Q 014285 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF 338 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~ 338 (427)
++++|+++++.|+++++ .|||||+. |++++++|++ ++++||++||++.+..+++++++.+++|++|+|+++
T Consensus 225 ~~~~A~~~~~~L~~~~i--~~iE~P~~--d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~- 295 (409)
T 3go2_A 225 KPEGYLKILRELADFDL--FWVEIDSY--SPQGLAYVRN----HSPHPISSCETLFGIREFKPFFDANAVDVAIVDTIW- 295 (409)
T ss_dssp CHHHHHHHHHHTTTSCC--SEEECCCS--CHHHHHHHHH----TCSSCEEECTTCCHHHHHHHHHHTTCCSEEEECHHH-
T ss_pred CHHHHHHHHHHHhhcCC--eEEEeCcC--CHHHHHHHHh----hCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEeCCCC-
Confidence 99999999999999997 49999984 8999999986 689999999999999999999999999999999999
Q ss_pred c-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCC-CcccccCCCCCceeeeCcEEecCCCCC
Q 014285 339 G-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNT-PFLLSEDPFVGGCEVSGAIYNFTNARG 416 (427)
Q Consensus 339 G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~-p~~~~~~~~~~~~~~~~G~i~~p~~pG 416 (427)
| ++++++++++|+++|+++++|+ +||+|+++|++|++++++|+.++|++. +..+.++++.+++.++||++.+|++||
T Consensus 296 GGit~~~~ia~~A~~~gi~~~~h~-~~s~i~~aa~~hlaaa~p~~~~~E~~~~~~~~~~d~~~~~~~~~~G~i~~p~~PG 374 (409)
T 3go2_A 296 NGVWQSMKIAAFADAHDINVAPHN-FYGHLCTMINANFAAAVPNLRIMETDIDRLAWEDELFTHAPEYQNGELIIPDRPG 374 (409)
T ss_dssp HCHHHHHHHHHHHHHTTCEEEECC-CSCHHHHHHHHHHHHHCSSBCCEEECCCCCTTHHHHBSCCCCEETTEEECCCSSB
T ss_pred CCHHHHHHHHHHHHHcCCEEeecC-CCcHHHHHHHHHHHHcCCCCeEEEeeCCcchhhhhhccCCCeeECCEEECCCCCC
Confidence 8 9999999999999999999985 799999999999999999998876553 233456778888899999999999999
Q ss_pred cccccCCCcC
Q 014285 417 QGGFLKWTIV 426 (427)
Q Consensus 417 lGve~d~~~v 426 (427)
||||+|+++|
T Consensus 375 lGveld~~~l 384 (409)
T 3go2_A 375 WGTDPVEEAI 384 (409)
T ss_dssp SSCCBCHHHH
T ss_pred CCcccCHHHH
Confidence 9999999865
No 80
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=100.00 E-value=3.3e-64 Score=518.63 Aligned_cols=346 Identities=16% Similarity=0.179 Sum_probs=297.7
Q ss_pred eeeEEEEEEEEEEeeccccccccceeE-EeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSV-ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPT 142 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~-~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~ 142 (427)
.++|++++++++..+ ..|+.+..|.. +....++|+|+||+|++||||+.. ++. ....++.+.|.|+|+++.
T Consensus 8 ~~~It~v~v~~v~~~-d~~~~~~~g~h~~~~~~~iV~v~td~Gi~G~GE~~~-----~~~--v~~~i~~l~p~LiG~dp~ 79 (455)
T 3pfr_A 8 VPVITDMKVIPVAGH-DSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPG-----GAT--IENALTEAIPHVVGRPIS 79 (455)
T ss_dssp CCBEEEEEEEEEEEE-CCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC-----SHH--HHHHHHHHGGGTTTCBGG
T ss_pred CCEEEEEEEEEeccC-CccccccccCCCCcceEEEEEEEECCCCEEEEeCCC-----cHH--HHHHHHHHHHHhcCCChh
Confidence 489999999999999 77777766654 346778999999999999999853 122 223356689999999999
Q ss_pred CHHHHHHHHHH--HCCC-------Ch----hhhHHHHHHHHHHHHHHhhCCCChhhhhC-CC-CCceeeeeeec------
Q 014285 143 TLNFALDEIAR--ILPG-------SE----FASVRAGVEMALIDAVANSIDIPLWRLFG-GA-SNSLSTAITIP------ 201 (427)
Q Consensus 143 ~~~~~~~~l~~--~~~g-------~~----~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg-g~-~~~ip~~~~i~------ 201 (427)
+++.+|+.|++ .+.+ .. ..++++|||+|||||+||.+|+|||+||| |+ +++||+|.+..
T Consensus 80 ~ie~i~~~~~~~~~~~~~~~g~~G~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGgG~~r~~v~~y~~~~~~gd~~ 159 (455)
T 3pfr_A 80 ILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPGKQRDEVTVLGYLFYVGDDK 159 (455)
T ss_dssp GHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHHTSBGGGGSTTSCCCSEEEBCEEECCBCCGG
T ss_pred HHHHHHHHHHhhccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCcCCeEEEeeeeccccccc
Confidence 99999999987 4321 10 16799999999999999999999999999 65 78999976421
Q ss_pred -----------------------CCCHHHHHHHHHHHhh-cCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCC
Q 014285 202 -----------------------AVSPAEASELASKYCK-LGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANE 256 (427)
Q Consensus 202 -----------------------~~~~~~~~~~~~~~~~-~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~ 256 (427)
..+++++.++++++++ +||++||+|+|. +.++|++++++||+.+|++.|+||||+
T Consensus 160 ~~~~~~~~s~~~~~~w~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~pd~~L~vDaN~ 239 (455)
T 3pfr_A 160 ITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNG 239 (455)
T ss_dssp GSCSCCCCCCCSSCTHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCTTCCEEEECTT
T ss_pred cccccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCEEEEcCCCCCHHHHHHHHHHHHHhCCCCeEeecCCC
Confidence 2478999999998887 699999999996 789999999999998899999999999
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeCCCCCCC----hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEE
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD----WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVN 332 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d----~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~ 332 (427)
+|++++|++++++|+++ + .|||||++++| +++|++|++ ++++|||+||++.+..+++++++.+++|++|
T Consensus 240 ~w~~~~A~~~~~~L~~~-l--~~iEeP~~~~d~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~ 312 (455)
T 3pfr_A 240 CWSLDEAIQLCKGLNDV-L--TYAEDPCIGENGYSGREIMAEFRR----RTGIPTATNMIATNWREMCHAIMLQSVDIPL 312 (455)
T ss_dssp BSCHHHHHHHHTTCTTT-C--SEEESCBCCBTTBCHHHHHHHHHH----HHCCCEEESSSCCSHHHHHHHHHHTCCSEEB
T ss_pred CCCHHHHHHHHHhhccc-c--eeeecCCChhhccchHHHHHHHHh----cCCCCEEeCCCcCCHHHHHHHHHcCCCCEEE
Confidence 99999999999999998 6 49999999998 689999986 6899999999999999999999999999999
Q ss_pred eCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCcccc---cCCCCCceeeeCcE
Q 014285 333 IKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLLS---EDPFVGGCEVSGAI 408 (427)
Q Consensus 333 lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~~---~~~~~~~~~~~~G~ 408 (427)
+|+ ++| ++++++++++|+++|+++++|++.+++|+++|++|++++++|. +.+++.++... .+++.+++.++||+
T Consensus 313 ~d~-~~GGit~a~kia~lA~a~gv~~~~h~~~~~~i~~aa~~hlaaa~p~~-~~~~d~~~~~~~~~~~l~~~p~~~~dG~ 390 (455)
T 3pfr_A 313 ADP-HFWTLTGASRVAQLCNEWGLTWGCHSNNHFDISLAMFSHVGAAAPGN-PTALDTHWIWQEGDFYLTKNPLEIKDGK 390 (455)
T ss_dssp CCH-HHHCHHHHHHHHHHHHHTTCCCBCCCCSCCHHHHHHHHHHHHHCCSC-CCCBCCCGGGTTTTCCSBSSCCCEETTE
T ss_pred ecC-CcCCHHHHHHHHHHHHHcCCEEEecCCcccHHHHHHHHHHHHhCCCc-chhhccccccccchhhccCCCCeEECCE
Confidence 998 676 9999999999999999999999999999999999999999986 33444433221 46777888999999
Q ss_pred EecCCCCCcccccCCCcC
Q 014285 409 YNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 409 i~~p~~pGlGve~d~~~v 426 (427)
+.+|++||||||+|+++|
T Consensus 391 i~vp~~PGLGveld~~~l 408 (455)
T 3pfr_A 391 IKLNDKPGLGIELNMDNV 408 (455)
T ss_dssp EECCSCSBTCCCBCHHHH
T ss_pred EeCCCCCcCCcccCHHHH
Confidence 999999999999999875
No 81
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=100.00 E-value=1.4e-63 Score=506.59 Aligned_cols=344 Identities=18% Similarity=0.205 Sum_probs=299.0
Q ss_pred eeeEEEEEEEEEEeeccccccccce------eEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhc
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLS------SVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLR 137 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~------~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~ 137 (427)
.|||++++++.+++|++.||.++.+ +.+.++.++|+|+|++|++|||||. .+.++.+ .....++.++|.|+
T Consensus 12 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~-~~~~~~~--~~~~~i~~l~~~l~ 88 (393)
T 2og9_A 12 SDRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQGLGFSY-SKRAGGP--GQFAHAREIAPALI 88 (393)
T ss_dssp CCCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCEEEEEEE-EESTTHH--HHHHHHHHHGGGGT
T ss_pred CCeEeEEEEEEEeccCCCccccccccccccCCcCCccEEEEEEEECCCCEEEEEec-CcccchH--HHHHHHHHHHHHHc
Confidence 3999999999999999999999976 6778899999999999999999993 3333322 12223456899999
Q ss_pred CCCCCCHHHHHHHHHHHC--CC--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC--C-CHHHHHH
Q 014285 138 QSPPTTLNFALDEIARIL--PG--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA--V-SPAEASE 210 (427)
Q Consensus 138 g~~~~~~~~~~~~l~~~~--~g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~--~-~~~~~~~ 210 (427)
|+++.+++.+|+.|.+.. .+ ...+++++||||||||++||..|+|||+||||.++++|+|.+++. . +++++.+
T Consensus 89 G~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~llGg~~~~vp~y~~~g~~~~~~~e~~~~ 168 (393)
T 2og9_A 89 GEDPSDIAKLWDKLCWAGASAGRSGLSTQAIGAFDVALWDLKAKRAGLSLAKLLGSYRDSVRCYNTSGGFLHTPIDQLMV 168 (393)
T ss_dssp TSCTTCHHHHHHHHHHTTGGGCSSSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHCCSCSEEEEEBCTTCCTTSCHHHHHH
T ss_pred CCChhhHHHHHHHHHHhhhhcCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCceEEEEECCCcCCCCHHHHHH
Confidence 999999999999998642 22 235689999999999999999999999999999999999988532 4 8999999
Q ss_pred HHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCC
Q 014285 211 LASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD 288 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d 288 (427)
.+++++++||+++|+|+|. +++.|++++++||+. ++++.|+||+|++|++++|+++++.|+++++ .|||||++++|
T Consensus 169 ~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iE~P~~~~~ 246 (393)
T 2og9_A 169 NASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNL--VWIEEPLDAYD 246 (393)
T ss_dssp HHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCC--SCEECCSCTTC
T ss_pred HHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCC--CEEECCCCccc
Confidence 9999999999999999995 789999999999994 8999999999999999999999999999997 49999999999
Q ss_pred hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhH
Q 014285 289 WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 289 ~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
++++++|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|++.+
T Consensus 247 ~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~~~--- 319 (393)
T 2og9_A 247 HEGHAALAL----QFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLAPHFAME--- 319 (393)
T ss_dssp HHHHHHHHH----HCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCHH---
T ss_pred HHHHHHHHH----hCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEeccCccH---
Confidence 999999986 68999999999999999999999999999999999997 9999999999999999999998754
Q ss_pred HHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCc
Q 014285 368 ATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTI 425 (427)
Q Consensus 368 g~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~ 425 (427)
.++|+++++++..+.|+.. + ..+++.+++.++||++.+|++||||+++|+++
T Consensus 320 ---~~~~laaa~~~~~~~e~~~-~--~~~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~ 371 (393)
T 2og9_A 320 ---LHVHLAAAYPREPWVEHFE-W--LEPLFNERIEIRDGRMLVPTRPGLGLTLSGQV 371 (393)
T ss_dssp ---HHHHHHHTSSSCCEEECCC-T--TGGGBSCCCCEETTEEECCCSSBTCCCBCTHH
T ss_pred ---HHHHHHhhCCCCceeeccc-c--hHHHccCCCeeeCCEEECCCCCCCCeeeCHHH
Confidence 3679999999988887642 2 24567778889999999999999999999874
No 82
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=100.00 E-value=5.6e-64 Score=514.98 Aligned_cols=350 Identities=18% Similarity=0.203 Sum_probs=289.4
Q ss_pred eeEEEEEEEEEEeeccccccccce--eEEeeeEEEEEEEEcC--CceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLS--SVENVENVAIRVELSN--GCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~--~~~~~~~vlV~v~t~~--G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~ 140 (427)
|||++|+++.+++|++.|+..+.+ +....+.++|+|+||+ |++||||+.+... +.+ .....++.+.|.|+|++
T Consensus 5 mkI~~i~~~~v~~p~~~~~~~s~~~~~~~~~~~~~V~i~Td~~dG~~G~Ge~~~~g~-~~~--~~~~~i~~l~~~liG~d 81 (441)
T 4a35_A 5 GRISRLSVRDVRFPTSLGGHGADAMHTDPDYSAAYVVIETDAEDGIKGCGITFTLGK-GTE--VVVCAVNALAHHVLNKD 81 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTCCCCSSCSSCCCEEEEEEEEESSCSCCCEEEEEEECST-THH--HHHHHHHHHGGGTTTCB
T ss_pred CEEEEEEEEEEEecCCCCCCCccceeccCcceEEEEEEEECCCCCCEEEEeeeCCCC-ChH--HHHHHHHHHHHHhCCCC
Confidence 899999999999999988776544 3355789999999998 9999999986421 111 12233466899999999
Q ss_pred CCCHHHHHHHHHHHC--------CCC---hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCC-C----------------
Q 014285 141 PTTLNFALDEIARIL--------PGS---EFASVRAGVEMALIDAVANSIDIPLWRLFGGAS-N---------------- 192 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~--------~g~---~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~-~---------------- 192 (427)
+.+++.+|+.+++.+ .|. ...++++|||+|||||+||.+|+|||+||||.. +
T Consensus 82 ~~~i~~~~~~~~~~l~~~~~~~~~g~~~g~~~~A~saID~ALwDl~gK~~g~Pv~~LLGG~~r~~i~~~~~~~y~~d~~~ 161 (441)
T 4a35_A 82 LKDIVGDFRGFYRQLTSDGQLRWIGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLT 161 (441)
T ss_dssp HHHHHTTHHHHHHHHHSCTTGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHSCHHHHHTTCCCTTTTTTCC
T ss_pred HHHHHHHHHHHHHHHhhccceeecCCCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCcccceecccccccccccc
Confidence 999865554444321 121 336799999999999999999999999999973 2
Q ss_pred -------------------------ceeeeeee--c-CCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-
Q 014285 193 -------------------------SLSTAITI--P-AVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA- 243 (427)
Q Consensus 193 -------------------------~ip~~~~i--~-~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~- 243 (427)
.+|.|.+. + ..+++++.+.+++++++||++||+|+|.++++|++++++||+
T Consensus 162 ~~~~~~~~~~~~~~~~~r~~~~~~~~~p~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~~d~~~v~avR~a 241 (441)
T 4a35_A 162 EEDALEILQKGQIGKKEREKQMLAQGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDM 241 (441)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHCEEEEECTTCCTTCCHHHHHHHHHHHHHTTCCEEEEECSSCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhcccccchhhhhhcccCcceEEeccccCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCHHHHHHHHHHHHHH
Confidence 26777763 1 248999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHH
Q 014285 244 VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVM 323 (427)
Q Consensus 244 ~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll 323 (427)
.+|++.|+||||++|++++|++++++|+++++ .|||||++++|++++++|++.++ .+++|||+||++.+..++++++
T Consensus 242 ~G~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~--~~iEeP~~~~d~~~~~~l~~~l~-~~~iPIa~gE~~~~~~~~~~~l 318 (441)
T 4a35_A 242 IGPEKTLMMDANQRWDVPEAVEWMSKLAKFKP--LWIEEPTSPDDILGHATISKALV-PLGIGIATGEQCHNRVIFKQLL 318 (441)
T ss_dssp HCTTSEEEEECTTCCCHHHHHHHHHHHGGGCC--SEEECCSCTTCHHHHHHHHHHHG-GGTCEEEECTTCCSHHHHHHHH
T ss_pred hCCCCeEEEECCCCCCHHHHHHHHHhhcccCc--cEEeCCCCcccHHHHHHHHHhcc-CCCCCEEeCCccccHHHHHHHH
Confidence 48999999999999999999999999999987 59999999999999999986211 2789999999999999999999
Q ss_pred HcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHH-HHHHh-------hcCCcceeccCCCcccc
Q 014285 324 QENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFA-LHLAA-------GLGCIKYVNLNTPFLLS 394 (427)
Q Consensus 324 ~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~-~hlaa-------al~~~~~~e~~~p~~~~ 394 (427)
+.+++|++|+|++++| ++++++++++|+++|+++++|+ +++|++++ .|++. +..+..++|+..+ .
T Consensus 319 ~~~a~div~~d~~~~GGit~~~kia~lA~~~gv~v~~H~---~~ig~aa~~~hl~~~~~~~l~~~~~~~~~E~~~~---~ 392 (441)
T 4a35_A 319 QAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHA---GGVGLCELVQHLIIFDYISVSASLENRVCEYVDH---L 392 (441)
T ss_dssp HTTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCCBCCCC---CTTTHHHHHHHHHHHHHHHTSCCCTTCCEEECCS---S
T ss_pred HcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeC---ChHHHHHHHHHHhhhhhcccccCcccceeeccch---h
Confidence 9999999999999998 9999999999999999999996 46777654 35432 2233345554332 2
Q ss_pred cCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 395 EDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 395 ~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
.+++.+++.++||++.+|++||||||+|+++|
T Consensus 393 ~~~~~~p~~~~dG~i~vp~~PGLGveld~~~l 424 (441)
T 4a35_A 393 HEHFKYPVMIQRASYMPPKDPGYSTEMKEESV 424 (441)
T ss_dssp GGGBSSCCEESSSEEECCCSSBCSCCBCHHHH
T ss_pred hhcccCCceeeCCEEECCCCCcCCcccCHHHH
Confidence 45677888999999999999999999999865
No 83
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=100.00 E-value=1.9e-63 Score=506.36 Aligned_cols=342 Identities=18% Similarity=0.225 Sum_probs=302.6
Q ss_pred eeEEEEEEEEEEeeccccccccce------eEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLS------SVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQ 138 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~------~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g 138 (427)
|||++++++.+++|++.||.++.+ +.+.++.++|+|+|++|++||||+. .+.++++ .....++.++|.|+|
T Consensus 26 mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~-~~~~~~~--~~~~~~~~l~p~l~G 102 (398)
T 2pp0_A 26 DRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSY-SKRAGGQ--GIYAHAKEIADNLLG 102 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCEEEEEEE-ESSTTHH--HHHHHHHHHGGGGTT
T ss_pred CeEEEEEEEEEeccCCCcccccccccccccccCCCcEEEEEEEECCCCEEEEEec-CccchHH--HHHHHHHHHHHHHcC
Confidence 999999999999999999999865 7888999999999999999999994 3333322 122234568999999
Q ss_pred CCCCCHHHHHHHHHHHC--CCC--hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC--C-CHHHHHHH
Q 014285 139 SPPTTLNFALDEIARIL--PGS--EFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA--V-SPAEASEL 211 (427)
Q Consensus 139 ~~~~~~~~~~~~l~~~~--~g~--~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~--~-~~~~~~~~ 211 (427)
+++.+++.+|+.|.+.. .++ ..+++++||||||||++||..|+|||+||||.++++|+|.+++. . +++++.+.
T Consensus 103 ~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLGg~~~~vp~y~~~g~~~~~~~e~~~~~ 182 (398)
T 2pp0_A 103 EDPNDIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLGAHRDSVQCYNTSGGFLHTPLDQVLKN 182 (398)
T ss_dssp SCTTCHHHHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHCCSCSEEEEEECTTSCTTSCHHHHHHH
T ss_pred CCchhHHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCeeEEEecCCcCCCCHHHHHHH
Confidence 99999999999997652 222 34689999999999999999999999999999899999988532 4 89999999
Q ss_pred HHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh
Q 014285 212 ASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW 289 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~ 289 (427)
+++++++||+.+|+|+|. +++.|++++++||+. ++++.|+||+|++|++++|+++++.|+++++ .|||||++++|+
T Consensus 183 a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i--~~iEqP~~~~d~ 260 (398)
T 2pp0_A 183 VVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNL--IWIEEPLDAYDI 260 (398)
T ss_dssp HHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTC--SCEECCSCTTCH
T ss_pred HHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCC--ceeeCCCChhhH
Confidence 999999999999999995 789999999999994 8999999999999999999999999999997 499999999999
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHH
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLA 368 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig 368 (427)
+++++|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++|++.++
T Consensus 261 ~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~~~~~--- 333 (398)
T 2pp0_A 261 EGHAQLAA----ALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAPHFAMEV--- 333 (398)
T ss_dssp HHHHHHHH----HCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCSCHHH---
T ss_pred HHHHHHHh----hCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEeecCccHH---
Confidence 99999986 68999999999999999999999999999999999997 99999999999999999999987543
Q ss_pred HHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCC
Q 014285 369 TGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWT 424 (427)
Q Consensus 369 ~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~ 424 (427)
++|+++++++..+.|+.. +..+++.+++.++||++.+|++||||+++|++
T Consensus 334 ---~~~laaa~~~~~~~e~~~---~~~~~~~~~~~~~~G~i~~p~~PGlGv~~d~~ 383 (398)
T 2pp0_A 334 ---HLHLSAAYPLEPWLEHFE---WLNPLFNEQLELRDGRMWISDRHGLGFTLSEQ 383 (398)
T ss_dssp ---HHHHHHTCSSCCCEEECS---TTGGGBSCCCEEETTEEECCSSSBTCCCBCHH
T ss_pred ---HHHHHhcCCCcceeeccc---chhhhccCCCeeeCCEEECCCCCCCCcccCHH
Confidence 689999999988877542 22456777889999999999999999999986
No 84
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=100.00 E-value=2.9e-63 Score=506.25 Aligned_cols=334 Identities=16% Similarity=0.177 Sum_probs=284.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHH-HHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVR-EACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~-~~~~~l~g~~~~~ 143 (427)
|||++|+++.++ ..++.++|+|+||+|++||||+.. +.+ .....+. .+.|.|+|++|.+
T Consensus 4 mkIt~v~~~~~~--------------~~~~~~~V~v~td~G~~G~GE~~~----~~~--~~~~~i~~~l~p~liG~dp~~ 63 (410)
T 3dip_A 4 PRITALRTIRLP--------------ERPKLIWVEVETEDGLTGLGETFR----GAQ--AVEAVLHEQTAPAIIGRAAEN 63 (410)
T ss_dssp CBEEEEEEEEET--------------TEEEEEEEEEEETTSCEEEEEEES----CHH--HHHHHHHHTHHHHHTTSBTTC
T ss_pred CeEEEEEEEEEC--------------CCCCEEEEEEEECCCCEEEEeCCC----ChH--HHHHHHHHHHHHHhcCCCcch
Confidence 899999987653 135789999999999999999532 122 2222344 3889999999999
Q ss_pred HHHHHHHHHHHCC----CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecC----------------
Q 014285 144 LNFALDEIARILP----GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPA---------------- 202 (427)
Q Consensus 144 ~~~~~~~l~~~~~----g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~---------------- 202 (427)
++.+|+.|++... +....++++|||||||||+||.+|+|||+||||. +++||+|.++..
T Consensus 64 ~e~~~~~~~~~~~~~~~~~~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~yas~~~~~g~~~~~~~~~~~~~ 143 (410)
T 3dip_A 64 ITSISSELLNPYVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALGGAARDRVPVYATCAGYDFNTSLGGRRSIGSA 143 (410)
T ss_dssp HHHHHHHHTCCSSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEEEEEECTTTC-------------
T ss_pred HHHHHHHHHHHHHhhCCccHHHHHHHHHHHHHHHHhHhHcCCcHHHHhCCCcCCceeEEEeccccccccccccccccccc
Confidence 9999999976421 1234679999999999999999999999999996 799999965421
Q ss_pred -------CCHHH----HHHHHHHHhhcCCcEEEE--------eccC-----CchhhHHHHHHHHHh-CCCcEEEEeCCCC
Q 014285 203 -------VSPAE----ASELASKYCKLGFSTLKL--------NVGR-----NITADFDVLQAIHAV-HPHCSFILDANEG 257 (427)
Q Consensus 203 -------~~~~~----~~~~~~~~~~~Gf~~iKl--------KiG~-----~~~~d~~~l~~ir~~-~~~~~L~vDAN~~ 257 (427)
.++++ ..+.+++++++||++||+ |+|. ++++|++++++||+. ++++.|+||+|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~ 223 (410)
T 3dip_A 144 ELSTGPYDDQVAFMRDAGVLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSL 223 (410)
T ss_dssp ---------------CHHHHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTC
T ss_pred ccccccccchhhhhhhHHHHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCC
Confidence 12222 245567888999999999 9985 357899999999995 7899999999999
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCC-CCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQP-VHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP-~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
|++++|+++++.|+++++ .||||| ++++|++++++|++ ++++||++||++.+..+++++++.+++|++|+|++
T Consensus 224 ~~~~~A~~~~~~L~~~~i--~~iEqP~~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 297 (410)
T 3dip_A 224 WGTHAAARICNALADYGV--LWVEDPIAKMDNIPAVADLRR----QTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLT 297 (410)
T ss_dssp BCHHHHHHHHHHGGGGTC--SEEECCBSCTTCHHHHHHHHH----HHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTT
T ss_pred CCHHHHHHHHHHHHhcCC--CEEECCCCCcccHHHHHHHHh----hCCCCEEecCCcCCHHHHHHHHHcCCCCeEeeccc
Confidence 999999999999999997 499999 89999999999986 68999999999999999999999999999999999
Q ss_pred Ccc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceecc-C-CCcccccCCCCCceeeeCcEEecCC
Q 014285 337 KFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNL-N-TPFLLSEDPFVGGCEVSGAIYNFTN 413 (427)
Q Consensus 337 ~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~-~-~p~~~~~~~~~~~~~~~~G~i~~p~ 413 (427)
++| ++++++++++|+++|+++++|++ |+|+++|++|++++++|+.+.|+ + ....+.++++.+++.++||++.+|+
T Consensus 298 ~~GGit~~~~ia~~A~~~gi~~~~h~~--s~i~~aa~~hlaaa~pn~~~~e~~~~~~~~~~~~~~~~~~~~~~G~i~~p~ 375 (410)
T 3dip_A 298 WCGGLSEGRKIAALAETHARPLAPHXT--GPVALMAGLHLALHAPTAIFQEVVRASLATWYADLVDHLPVIQEGIALAPT 375 (410)
T ss_dssp TSSCHHHHHHHHHHHHHTTCCEEECSS--CHHHHHHHHHHHHHCTTBCCEEEECTTSCCTHHHHBSCCCCEETTEEECCC
T ss_pred ccCCHHHHHHHHHHHHHcCCEEeeeCc--cHHHHHHHHHHHHhCCCCeEEEeccccCchhHHhhcCCCCcccCCEEECCC
Confidence 997 99999999999999999999998 99999999999999999988874 3 1222345677888899999999999
Q ss_pred CCCcccccCCCcC
Q 014285 414 ARGQGGFLKWTIV 426 (427)
Q Consensus 414 ~pGlGve~d~~~v 426 (427)
+||||+|+|++++
T Consensus 376 ~PGlGve~d~~~l 388 (410)
T 3dip_A 376 RPGLGTALLPHVR 388 (410)
T ss_dssp SSBTSCCBCTTGG
T ss_pred CCCCCcccCHHHH
Confidence 9999999999976
No 85
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=100.00 E-value=8.1e-64 Score=505.76 Aligned_cols=340 Identities=18% Similarity=0.231 Sum_probs=293.1
Q ss_pred eEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchH-HHHHHHHHHhhHhcCCCC---
Q 014285 66 DVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQT-KALVKVREACQFLRQSPP--- 141 (427)
Q Consensus 66 ~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~-~~~~~~~~~~~~l~g~~~--- 141 (427)
++ +++++++++|++.||.++.++++.++.++|+| |++|++|||||.++++++++.. .....++.+++.|+|+++
T Consensus 4 ~m-~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~v-td~G~~G~GE~~~~~~~~~e~~~~~~~~l~~~~~~l~g~d~~~~ 81 (377)
T 2pge_A 4 GM-ELSYRRSDLIFKRPAGTSRGVLTSKPTWFVRL-DIDGHGGQGEVSLIPGLSLDPEEQIGRELDLLARRLRAEEPIRL 81 (377)
T ss_dssp CC-EEEEEECCEEBCC-------CCCEECEEEEEE-EETTEEEEEEEECCTTTCSSCHHHHHHHHHHHHHHHHHSCCHHH
T ss_pred ce-EEEEEEEeecccCcceeccEEEeecceEEEEE-EcCCCEEEEEeccCCCCCcCCHHHHHHHHHHHHHHHhCCCccch
Confidence 55 88999999999999999999999999999999 9999999999999887776433 344456678999999977
Q ss_pred ---------CCHHHHHHHHHHH------C---CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCC
Q 014285 142 ---------TTLNFALDEIARI------L---PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV 203 (427)
Q Consensus 142 ---------~~~~~~~~~l~~~------~---~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~ 203 (427)
.+++.+|+.|.+. . .+...+++++|||+||||+.||..|+|||+||||.++++|+|.+++..
T Consensus 82 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~a~~aid~Al~Dl~ak~~g~Pl~~llGg~~~~vp~~~~i~~~ 161 (377)
T 2pge_A 82 RQFLAERGGADFSDYRSVLTDIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFASDFTRGEKRIPVNGLIWMG 161 (377)
T ss_dssp HHHHHHTSSCTTSCHHHHHHHHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCSTTTTTSCCEEBCEEECCC
T ss_pred hhhhhccccccHHHHHHhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCeEEEeEEecCC
Confidence 3445666555331 1 112346899999999999999999999999999988899999999888
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh-C-CCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV-H-PHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF 280 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~-~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i 280 (427)
++++|.+++++++++||+++|+|+|. ++++|+++++++|+. + +++.|+||||++|++++|+++++.|+++++ .||
T Consensus 162 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avr~~~g~~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i--~~i 239 (377)
T 2pge_A 162 EAAFMQEQIEAKLAEGYGCLKLKIGAIDFDKECALLAGIRESFSPQQLEIRVDANGAFSPANAPQRLKRLSQFHL--HSI 239 (377)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC---CHHHHHHHHHHHHHHSCTTTCEEEEECTTBBCTTTHHHHHHHHHTTCC--SEE
T ss_pred CHHHHHHHHHHHHHHhhhhheeecCCCChHHHHHHHHHHHHHcCCCCceEEEECCCCCCHHHHHHHHHHHhcCCC--cEE
Confidence 99999999999999999999999995 889999999999995 7 899999999999999999999999999997 499
Q ss_pred eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHH--HHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcE
Q 014285 281 EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLND--VQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHL 357 (427)
Q Consensus 281 EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~--~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~ 357 (427)
|||++++|++++++|++ ++++||++||++.+..+ ++++++.+++|++|+|++++| ++++++++++|+++|+++
T Consensus 240 EqP~~~~d~~~~~~l~~----~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~i~~~A~~~g~~~ 315 (377)
T 2pge_A 240 EQPIRQHQWSEMAALCA----NSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIELARERGIGF 315 (377)
T ss_dssp ECCBCSSCHHHHHHHHH----HCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred EccCCcccHHHHHHHHh----hCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCHHHHHHHHHHHHHCCCeE
Confidence 99999999999999986 68999999999999988 889999999999999999997 999999999999999999
Q ss_pred EEcccCchhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCC
Q 014285 358 MIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNA 414 (427)
Q Consensus 358 ~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~ 414 (427)
++|+++||++++++++|+++++++..+.|++++.++.+|++ .++.++||++.+|++
T Consensus 316 ~~~~~~es~i~~~a~~hlaa~~~~~~~~~l~~~~~~~~d~~-~~~~~~~G~~~~~~~ 371 (377)
T 2pge_A 316 WITSALESNLGLAAIAQWTALYQPTMPQGLGTGQLYTNNLP-SNLAVDGGLLGVSEG 371 (377)
T ss_dssp EEBCCSCCHHHHHHHHHHHHTTCCSSCBBCSCCCCBSSCCC-CCCEECSSEEEC---
T ss_pred EecCCcccHHHHHHHHHHHHCCCCCccccCCchhhhHhhcc-CCceeeCCEEecCCc
Confidence 99999999999999999999999987778887766677876 678999999999986
No 86
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=100.00 E-value=3e-63 Score=502.32 Aligned_cols=333 Identities=22% Similarity=0.332 Sum_probs=281.1
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHH-HHHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~-~~~~~~l~g~~~~~ 143 (427)
|||++++.+.. ++.++|||+||+|++||||+.+. +.+. ....+ +.+.|.|+|+++.+
T Consensus 23 mkIt~v~~~~~-----------------~~~~~V~v~Td~G~~G~GE~~~~---~~~~--~~~~i~~~l~p~LiG~d~~~ 80 (388)
T 3tcs_A 23 MKLKAIETFTN-----------------DAVGFVRVTTQDGAQGWGQVSTY---HADI--TCTVLHRQVAPWMLGQDITD 80 (388)
T ss_dssp CBEEEEEEEEC-----------------SSCEEEEEEETTSCEEEEECCSS---SHHH--HHHHHHHHTHHHHTTSBCTT
T ss_pred cEEEEEEEEEe-----------------CCeEEEEEEECCCCEEEEeccCC---ccHH--HHHHHHHHHHHHhCCCCccc
Confidence 99999997541 23589999999999999999752 2222 11223 45889999999999
Q ss_pred HHHHHHHHHHHC---CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecC--CCHHHHHHHHHHH-hh
Q 014285 144 LNFALDEIARIL---PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPA--VSPAEASELASKY-CK 217 (427)
Q Consensus 144 ~~~~~~~l~~~~---~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~--~~~~~~~~~~~~~-~~ 217 (427)
++.+|+.|++.. +|....++++||||||||++||.+|+|||+||||.++++|+|.+... .+++++.+.+++. .+
T Consensus 81 ~e~l~~~~~~~~~~~~g~~~~~A~saiD~ALwDl~gK~~g~Pv~~LLGg~~~~v~~y~s~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3tcs_A 81 LDDLLDIVTEREHKFPGSYLRRAMAGVDTAIWDLRGKQQGKPVAEVLGGTPGLIRAYASSMKRDITPRDEAERLKRLRDT 160 (388)
T ss_dssp HHHHHHHHHHHTTTCCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCCEEEEEEEECCCSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHhHcCCcHHHHhCCCCCceEEEEecCcCCCChHHHHHHHHHHHHh
Confidence 999999998642 23334578999999999999999999999999999889999987532 3676665555444 57
Q ss_pred cCCcEEEEeccCC--------chhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCC
Q 014285 218 LGFSTLKLNVGRN--------ITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD 288 (427)
Q Consensus 218 ~Gf~~iKlKiG~~--------~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d 288 (427)
+||++||+|+|.+ +++|++++++||+ .+|++.|+||+|++|++++|++++++|+++++ .|||||++++|
T Consensus 161 ~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~~~~l~~~~i--~~iEeP~~~~d 238 (388)
T 3tcs_A 161 QGFTAFKVRAGAEVGRNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIEVGHMLQDHGF--CHFEEPCPYWE 238 (388)
T ss_dssp HCCCEEEEECSCTTCTTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHHHTTC--CEEECCSCTTC
T ss_pred cCCCEEEEccCCCcccccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCC--eEEECCCCccC
Confidence 8999999999963 3457899999999 58999999999999999999999999999997 49999999999
Q ss_pred hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhH
Q 014285 289 WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 289 ~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
++++++|++ ++++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++. +++
T Consensus 239 ~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A~~~gv~~~~h~~~-~~~ 313 (388)
T 3tcs_A 239 LAQTKQVTD----ALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMARAAGLPVTPHCAN-WSL 313 (388)
T ss_dssp HHHHHHHHH----HCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCCBCCCCCS-TTT
T ss_pred HHHHHHHHH----hcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCCC-cHH
Confidence 999999986 68999999999999999999999999999999999997 999999999999999999999975 567
Q ss_pred HHHHHHHHHhhcCCcc-eeccC--CC--cccccCCC-CCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 368 ATGFALHLAAGLGCIK-YVNLN--TP--FLLSEDPF-VGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 368 g~~a~~hlaaal~~~~-~~e~~--~p--~~~~~~~~-~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+.++++|++++++|.. |+|++ ++ .....+++ .+++.++||++.+|++||||+|+|+++|
T Consensus 314 ~~~a~~hl~aa~pn~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~G~i~vp~~PGLGveld~~~l 378 (388)
T 3tcs_A 314 VTLFTMHLLRAIPNAGKYLEFSIEGPDYYPWQEGLFVKTPYEIEDGHARVTDAPGWGVEISPEWL 378 (388)
T ss_dssp HHHHHHHHHTTCTTBCSCEEEECCCTTTCGGGTTCBSSCSCCCBTTEEEECSSSBTCCCBCHHHH
T ss_pred HHHHHHHHHHhCCCccceeEeecCcccccchhhhhccCCCceeeCCEEECCCCCCCCCeECHHHH
Confidence 8889999999999973 55532 22 12234555 5677899999999999999999999865
No 87
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=100.00 E-value=3.9e-63 Score=505.70 Aligned_cols=346 Identities=15% Similarity=0.245 Sum_probs=297.7
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||++|+++.+++|++.|++. ...++|+|+|++|++||||+++..+.+.+ .....++++.|.|+|+++.++
T Consensus 4 MkI~~i~~~~~~~p~~~p~~~-------~~~v~V~v~td~G~~G~Ge~a~~~g~~~~--~~~~~i~~l~p~liG~d~~~~ 74 (407)
T 2o56_A 4 MKITSVDIIDVANDFASATSK-------WRPVVVKINTDEGISGFGEVGLAYGVGAS--AGIGMAKDLSAIIIGMDPMNN 74 (407)
T ss_dssp CCEEEEEEEECCCCC-----C-------CCCEEEEEEETTSCEEEEEESCSSSSCHH--HHHHHHHHHHHHHTTSCTTCH
T ss_pred CEEEEEEEEEeccccCCCccc-------ceeEEEEEEeCCCCEEEEeeccCCCCchH--HHHHHHHHHHHHhCCCChHHH
Confidence 899999999999999998642 13589999999999999999433222222 233345568999999999999
Q ss_pred HHHHHHHHHHCCC-----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeee-e--cCC---------CHH
Q 014285 145 NFALDEIARILPG-----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAIT-I--PAV---------SPA 206 (427)
Q Consensus 145 ~~~~~~l~~~~~g-----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~-i--~~~---------~~~ 206 (427)
+.+|+.|.+...+ ...+++++||||||||++||..|+|||+||||. ++++|+|.+ + +.. +++
T Consensus 75 ~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~~vp~y~~~i~~g~~~~~~~~~~~~~~ 154 (407)
T 2o56_A 75 EAIWEKMLKKTFWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLGGKSREKIRTYASQLQFGWGDGSDKDMLTEPE 154 (407)
T ss_dssp HHHHHHHHHSSSGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSSEEEEEECGGGCCSTTCTTCCCCSHH
T ss_pred HHHHHHHHHhccccCCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcCCCCCCeeeeeeeeccCCccccccccccCCHH
Confidence 9999999864321 124689999999999999999999999999997 789999976 5 334 899
Q ss_pred HHHHHHHHHhhcCCcEEEEec------cC-------------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHH
Q 014285 207 EASELASKYCKLGFSTLKLNV------GR-------------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEV 266 (427)
Q Consensus 207 ~~~~~~~~~~~~Gf~~iKlKi------G~-------------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~ 266 (427)
++.+.+++++++||+++|+|+ |. +++.|++++++||+ +++++.|+||+|++|++++|+++
T Consensus 155 ~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~ 234 (407)
T 2o56_A 155 QYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQF 234 (407)
T ss_dssp HHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHH
Confidence 999999999999999999997 53 45789999999999 68999999999999999999999
Q ss_pred HHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHH
Q 014285 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQ 345 (427)
Q Consensus 267 l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~ 345 (427)
++.|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++
T Consensus 235 ~~~l~~~~i--~~iE~P~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~ 308 (407)
T 2o56_A 235 GRMIEELGI--FYYEEPVMPLNPAQMKQVAD----KVNIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTCGGITEVKK 308 (407)
T ss_dssp HHHHGGGCC--SCEECSSCSSSHHHHHHHHH----HCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred HHHHHhcCC--CEEeCCCChhhHHHHHHHHH----hCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHH
Confidence 999999997 49999999999999999986 68999999999999999999999999999999999998 999999
Q ss_pred HHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCC--cccccCCCCCceeeeCcEEecCCCCCcccccCC
Q 014285 346 IIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTP--FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKW 423 (427)
Q Consensus 346 ~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p--~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~ 423 (427)
++++|+++|+++++|++. |+|+++|++|++++++|+.++|+... ..+..+++.+++.++||++.+|++||||+++|+
T Consensus 309 i~~~A~~~g~~~~~h~~~-s~i~~aa~~hlaaa~~~~~~~e~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~ 387 (407)
T 2o56_A 309 ICDMAHVYDKTVQIHVCG-GPISTAVALHMETAIPNFVIHELHRYALLEPNTQTCKYNYLPKNGMYEVPELPGIGQELTE 387 (407)
T ss_dssp HHHHHHTTTCEECCCCCS-CHHHHHHHHHHHHHCTTBCCEEEEGGGGSHHHHTTBSCCCCCBTTEECCCCSSBTSCCBCH
T ss_pred HHHHHHHcCCeEeecCCC-CHHHHHHHHHHHHhCCCceeEeeccccccccHHHhccCCceecCCEEECCCCCCCCceeCH
Confidence 999999999999999985 99999999999999999888876421 113467787888899999999999999999999
Q ss_pred CcC
Q 014285 424 TIV 426 (427)
Q Consensus 424 ~~v 426 (427)
+++
T Consensus 388 ~~l 390 (407)
T 2o56_A 388 ETM 390 (407)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 88
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=100.00 E-value=9.1e-63 Score=509.58 Aligned_cols=346 Identities=14% Similarity=0.161 Sum_probs=286.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeEE-eeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVE-NVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~-~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~ 143 (427)
-+|++++++++... ..|+....|... ...-.+|+|+||+|++|||||.. ++. ....++.+.|.|+|+++.+
T Consensus 26 p~i~~~~v~pva~~-d~~l~~~~g~h~p~f~RtiV~v~Td~Gi~G~GE~~g-----~~~--~~~~le~~~p~liG~dp~~ 97 (464)
T 4g8t_A 26 PIITEMQVIPVAGH-DSMLLNLSGAHSPYFTRNIVILKDNSGNTGVGEVPG-----GEK--IRQTLEDAKPLVIGKTLGE 97 (464)
T ss_dssp CBEEEEEEEEEEEE-CCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC-----CHH--HHHHHHHHGGGTTTCBGGG
T ss_pred CEEeEEEEEEecCC-CcccccCCcccCCccceEEEEEEECCCCEEEEeCCC-----cHH--HHHHHHHHHHHHcCCCHHH
Confidence 48999999998753 334555444321 12235899999999999999852 211 2233567899999999999
Q ss_pred HHHHHHHHHHHCCC-------------ChhhhHHHHHHHHHHHHHHhhCCCChhhhhC-CC-CCceeeeeeecC------
Q 014285 144 LNFALDEIARILPG-------------SEFASVRAGVEMALIDAVANSIDIPLWRLFG-GA-SNSLSTAITIPA------ 202 (427)
Q Consensus 144 ~~~~~~~l~~~~~g-------------~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg-g~-~~~ip~~~~i~~------ 202 (427)
++.+|+.|++.+.+ ....+|++|||+|||||+||.+|+|||+||| |+ +++||+|.+...
T Consensus 98 ie~i~~~l~~~~~~~~~~g~g~~~~~~~~~~~A~sAID~ALWDl~gK~~g~Pv~~LLGgG~~Rd~V~~y~~~~~~~d~~~ 177 (464)
T 4g8t_A 98 YKNVMNTVRQTFNDHDAGGRGLQTFDLRTTIHVVTAIEAAMLDLLGQFLGVTVASLLGDGQQRDAVEMLGYLFFIGDRKK 177 (464)
T ss_dssp HHHHHHHHHHHTTTSCTTTTCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTSBTGGGSTTSCCCSEEEBCEEECCBCCGGG
T ss_pred HHHHHHHHHHHhhhccccccccccccchhHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCCCceEEEEEEeeccCcccc
Confidence 99999999875321 1235789999999999999999999999999 55 789999887532
Q ss_pred -----------------------CCHHHHHHHHHHH-hhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCC
Q 014285 203 -----------------------VSPAEASELASKY-CKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEG 257 (427)
Q Consensus 203 -----------------------~~~~~~~~~~~~~-~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~ 257 (427)
.+++++.+++++. .+.||++||+|+|. +.++|+++++++|+.+|++.||||||++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~KlKvG~~~~~~di~~v~avrea~pd~~L~vDaN~~ 257 (464)
T 4g8t_A 178 TTLAYQNQENDPCDWYRVRHEEAMTPESVVRLAEAAYEKYGFNDFKLKGGVLDGFEEAEAVTALAKRFPDARITLDPNGA 257 (464)
T ss_dssp SCSCCCCCTTCSSHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTC
T ss_pred cchhhhcccccccchhhhcccccCCHHHHHHHHHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHhhCCCceEEEECCCc
Confidence 2456665555544 45699999999995 7899999999999988899999999999
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChh----hHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWS----GLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~----~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
|++++|+++++.|+++ + .|+|||++++|+. .+++|+ +++++|||+||++.+..+++++++.+++|++|+
T Consensus 258 wt~~~Ai~~~~~le~~-l--~wiEeP~~~~d~~~~~e~~a~lr----~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~ 330 (464)
T 4g8t_A 258 WSLDEAVKIGKQLKGV-L--AYAEDPCGAEQGYSGREIMAEFR----RATGLPTATNMIATDWRQMGHTISLQSVDIPLA 330 (464)
T ss_dssp BCHHHHHHHHHHTTTT-C--SCEESCBCCBTTBCHHHHHHHHH----HHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBC
T ss_pred cCHHHHHHHHHHhhhc-c--ceeecCcCcccccchHHHHHhhh----ccCCCCccccccccchhhHHHHHHhhCCCEEec
Confidence 9999999999999987 6 4999999998874 455555 479999999999999999999999999999999
Q ss_pred CCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCccee-ccCCC-cccccCCCCCceeeeCcEEe
Q 014285 334 KLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYV-NLNTP-FLLSEDPFVGGCEVSGAIYN 410 (427)
Q Consensus 334 k~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~-e~~~p-~~~~~~~~~~~~~~~~G~i~ 410 (427)
|+ ++| ++++++++++|+++|+++++|++.+++|+++|++|+++++||..+. +...+ ....++++.++++++||++.
T Consensus 331 d~-~~GGit~~~kia~lA~~~gi~v~~h~~~~~~I~laA~~hlaaa~pn~~~~~~~~~~~~~~~~~l~~~p~~i~dG~i~ 409 (464)
T 4g8t_A 331 DP-HFWTMQGSIRVAQMCHEWGLTWGSHSNNHFDISLAMFTHVAAAAPGDITAIDTHWIWQEGNQRLTKEPFQIKGGLVE 409 (464)
T ss_dssp CH-HHHCHHHHHHHHHHHHHHTCCCBCCCCSCCHHHHHHHHHHHTTCCSCCCCBCCCHHHHTTSCCSBSSCCCEETTEEE
T ss_pred cc-cccchHHHHHHHHHHHHcCCEEEEcCCcccHHHHHHHHHHHHhCCCCCccccccccccchhHhhcCCCCeeECCEEE
Confidence 94 676 9999999999999999999999999999999999999999986543 33322 23456778889999999999
Q ss_pred cCCCCCcccccCCCcC
Q 014285 411 FTNARGQGGFLKWTIV 426 (427)
Q Consensus 411 ~p~~pGlGve~d~~~v 426 (427)
+|++||||||+|+|+|
T Consensus 410 vP~~PGLGvelD~d~l 425 (464)
T 4g8t_A 410 VPKKPGLGVELDMDQV 425 (464)
T ss_dssp CCSSSBTCCCBCHHHH
T ss_pred CCCCCCCceEECHHHH
Confidence 9999999999999876
No 89
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=100.00 E-value=1.9e-62 Score=501.12 Aligned_cols=347 Identities=16% Similarity=0.226 Sum_probs=300.0
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||++|+++.+++|++++.... ...++|+|+|++|++||||+++..+.+.+ .....++++.|.|+|+++.++
T Consensus 3 MkI~~i~~~~~~~pl~~~~~~~------~~~v~V~v~td~G~~G~Ge~~~~~g~~~~--~~~~~i~~l~p~liG~d~~~~ 74 (410)
T 2gl5_A 3 LKITSIEVFDCELKKRDQTMSS------YNPVLIRVNTDSGLSGIGEVGLAYGAGAK--AGVGIIRDLAPLIVGEDPLNI 74 (410)
T ss_dssp CCEEEEEEEECCGGGTCGGGTT------CCCEEEEEEETTSCEEEEEESCSSSTTHH--HHHHHHHHHGGGTTTSCTTCH
T ss_pred ceEEEEEEEEecccccccCccc------ccceEEEEEeCCCCEEEEeecCcCCCChH--HHHHHHHHHHHHhCCCChHHH
Confidence 8999999999999987643110 12479999999999999999432222122 223345568999999999999
Q ss_pred HHHHHHHHHHCC----C-ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeee-ec--CC-------CHHHH
Q 014285 145 NFALDEIARILP----G-SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAIT-IP--AV-------SPAEA 208 (427)
Q Consensus 145 ~~~~~~l~~~~~----g-~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~-i~--~~-------~~~~~ 208 (427)
+.+|+.|.+... + ...+++++||||||||++||..|+|||+||||. ++++|+|.+ ++ .. +++++
T Consensus 75 ~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~~vp~y~~~i~~g~~~~~~~~~~~~~~ 154 (410)
T 2gl5_A 75 EKIWEFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLGGKTNEKLRTYASQLQFGWGDKNHILVTPEEY 154 (410)
T ss_dssp HHHHHHHHHSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTSCSCSSEEEEEECGGGCCTTCCSCCCSHHHH
T ss_pred HHHHHHHHHhcccccCCchHHHhHHHHHHHHHHHHhhhhcCCcHHHHcCCCccCceeEeEecccCCccccccccCCHHHH
Confidence 999999986432 1 124689999999999999999999999999996 688999987 65 34 89999
Q ss_pred HHHHHHHhhcCCcEEEEec------cC------------------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHH
Q 014285 209 SELASKYCKLGFSTLKLNV------GR------------------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEA 263 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKi------G~------------------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A 263 (427)
.+.+++++++||+++|+|+ |. +++.|++++++||+ +++++.|+||+|++|++++|
T Consensus 155 ~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a 234 (410)
T 2gl5_A 155 AEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLLGTNSA 234 (410)
T ss_dssp HHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHH
T ss_pred HHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 9999999999999999997 53 35779999999999 68999999999999999999
Q ss_pred HHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHH
Q 014285 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLG 342 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~ 342 (427)
+++++.|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++++|++++| +++
T Consensus 235 i~~~~~l~~~~i--~~iE~P~~~~~~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 308 (410)
T 2gl5_A 235 IQFAKAIEKYRI--FLYEEPIHPLNSDNMQKVSR----STTIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGITE 308 (410)
T ss_dssp HHHHHHHGGGCE--EEEECSSCSSCHHHHHHHHH----HCSSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred HHHHHHHHhcCC--CeEECCCChhhHHHHHHHHh----hCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHH
Confidence 999999999987 59999999999999999986 68999999999999999999999999999999999998 999
Q ss_pred HHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCC--cccccCCCCCceeeeCcEEecCCCCCcccc
Q 014285 343 TLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTP--FLLSEDPFVGGCEVSGAIYNFTNARGQGGF 420 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p--~~~~~~~~~~~~~~~~G~i~~p~~pGlGve 420 (427)
+++++++|+++|+++++|++ +|+|+++|++|++++++|+.++|+... ..+..+++.+++.++||++.+|++||||+|
T Consensus 309 ~~~ia~~A~~~gi~~~~h~~-~s~i~~aa~~hlaaa~~~~~~~e~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~ 387 (410)
T 2gl5_A 309 GKKICDYANIYDTTVQVHVC-GGPVSTVAALHMETAIPNFIIHEHHTNAMKASIRELCTHDYQPENGYYVAPEQPGLGQE 387 (410)
T ss_dssp HHHHHHHHHTTTCEECCCCC-SSHHHHHHHHHHHHHCTTBCCEEEETTTTCHHHHTTBSSCCCCBTTEECCCCSSBTSCC
T ss_pred HHHHHHHHHHcCCeEeecCC-CCHHHHHHHHHHHHhCCcceeeeeccccccchHHHhccCCceecCCEEECCCCCcCCcc
Confidence 99999999999999999998 599999999999999999888876421 113467787888999999999999999999
Q ss_pred cCCCcC
Q 014285 421 LKWTIV 426 (427)
Q Consensus 421 ~d~~~v 426 (427)
+|++++
T Consensus 388 ~d~~~l 393 (410)
T 2gl5_A 388 LNDEVV 393 (410)
T ss_dssp BCHHHH
T ss_pred cCHHHH
Confidence 999865
No 90
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=100.00 E-value=2.5e-62 Score=497.43 Aligned_cols=340 Identities=16% Similarity=0.229 Sum_probs=296.8
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhh-HhcCCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQ-FLRQSPPTT 143 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~-~l~g~~~~~ 143 (427)
|||++|+++.+. |. ++ ..++|+|+|++|++||||+.+. |+.........++.+.| .|+|+++.+
T Consensus 3 mkI~~i~~~~v~-~~--~~----------~~v~V~v~td~G~~G~GE~~~~--~g~~~~~~~~~i~~l~~~~l~G~d~~~ 67 (392)
T 2poz_A 3 LKITGVNIYLLK-SG--RL----------HPVLVEISTDEGITGAGEAGIA--YGVGGTAAAGMIKDLSERFLIGKDPSR 67 (392)
T ss_dssp CCEEEEEEEECC-BT--TB----------CCEEEEEEETTSCCEEEEESCS--SSSCHHHHHHHHHHHHHHHTTTCCTTC
T ss_pred CeEEEEEEEEEe-cC--Cc----------cEEEEEEEECCCCEEEEeecCC--cCCchHHHHHHHHHhhHhhhcCCChhH
Confidence 899999999887 43 22 2689999999999999999754 22222233344567889 999999999
Q ss_pred HHHHHHHHHHHCCC-----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeee---ecCCCHHHHHHHHHH
Q 014285 144 LNFALDEIARILPG-----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAIT---IPAVSPAEASELASK 214 (427)
Q Consensus 144 ~~~~~~~l~~~~~g-----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~---i~~~~~~~~~~~~~~ 214 (427)
++.+|+.|.+...+ ...+++++||||||||++||..|+|||+||||. ++++|+|.+ .+..+++++.+.+++
T Consensus 68 ~~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg~~~~~v~~y~~g~~~~~~~~~~~~~~a~~ 147 (392)
T 2poz_A 68 IEELWSTMYDHSFWAKNGGAIIFAGISAIEQALWDIKGKCLGVPVYELFGGKIRDRVRAYANGWYGAADTPDEFARAVER 147 (392)
T ss_dssp HHHHHHHHHHHSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEEEECSCCTTCCSHHHHHHHTHH
T ss_pred HHHHHHHHHHhcccccCCchHHHHHHHHHHHHHHHHhhhhcCCcHHHHcCCCccCceEEEEeccccCCCCHHHHHHHHHH
Confidence 99999999875322 124689999999999999999999999999997 679999875 224689999999999
Q ss_pred HhhcCCcEEEEecc------------------CCchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 215 YCKLGFSTLKLNVG------------------RNITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 215 ~~~~Gf~~iKlKiG------------------~~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
++++||+.+|+|+| .+++.|++++++||+ +++++.|+||+|++|++++|+++++.|+++++
T Consensus 148 ~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i 227 (392)
T 2poz_A 148 PLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRKIGELDI 227 (392)
T ss_dssp HHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCE
T ss_pred HHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 99999999999998 235789999999999 68999999999999999999999999999987
Q ss_pred CCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcC
Q 014285 276 IPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSG 354 (427)
Q Consensus 276 ~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~g 354 (427)
.|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|
T Consensus 228 --~~iE~P~~~~~~~~~~~l~~----~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 301 (392)
T 2poz_A 228 --CFVEEPCDPFDNGALKVISE----QIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYN 301 (392)
T ss_dssp --EEEECCSCTTCHHHHHHHHH----HCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTT
T ss_pred --CEEECCCCcccHHHHHHHHh----hCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcC
Confidence 59999999999999999986 68999999999999999999999999999999999997 999999999999999
Q ss_pred CcEEEcccCchhHHHHHHHHHHhhcCCcceeccCC--Cc-ccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 355 LHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNT--PF-LLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 355 i~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~--p~-~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|++. |+|++++++|++++++|+.+.|+.. .+ ...++++.+++.++||++.+|++||||+++|++++
T Consensus 302 ~~~~~h~~~-s~i~~aa~~hlaaa~~~~~~~e~~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 375 (392)
T 2poz_A 302 MRVAPHVCG-SSLIETATLQLEANITNFMIHEHYPAFKADDGYVEVLENPPSISSGYFEMPNGPGLGAVLIKRNI 375 (392)
T ss_dssp CEECCCCCS-SHHHHHHHHHHHHHCTTBCCEEECGGGGGSTTCCCCBSSCCCEETTEEECCCSSBTSCCBCHHHH
T ss_pred CeEecCCCC-CHHHHHHHHHHHHhCCCceEEeeccccccCchHHHhccCCCeecCCEEECCCCCCCCceeCHHHH
Confidence 999999987 9999999999999999988877652 11 23467787888999999999999999999999865
No 91
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=100.00 E-value=2e-63 Score=505.36 Aligned_cols=330 Identities=17% Similarity=0.167 Sum_probs=296.6
Q ss_pred eeeEEEEEEEEEEeeccccccccc-eeEEe--eeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCC
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGL-SSVEN--VENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSP 140 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~-~~~~~--~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~ 140 (427)
.|||++++++.+++|++.||.++. +.++. ++.++|+|+|+ |.+|||||. + .++.++|.|+|++
T Consensus 11 ~mkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~~~V~v~td-G~~G~GE~~---g----------~i~~l~p~l~G~d 76 (392)
T 3p3b_A 11 DWKVEKIEFAKLTGERARSAGANGRIGVHGKSCTVDIARITID-GQTGYGSSI---H----------MTPEWAEDVIGRR 76 (392)
T ss_dssp TCBEEEEEEEEEEEEEEEEECBCSSSCCCEEEEEEEEEEEEET-TEEEEEECC---S----------CCHHHHHTTTTCB
T ss_pred CCeEEEEEEEEEeccCCCcccccccccccCCCCcEEEEEEEEC-CCEEEEecc---c----------HHHHHHHHhcCCC
Confidence 499999999999999999999985 54666 88999999999 999999996 1 1235789999999
Q ss_pred CCCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCC----C--CCceeeeee---ecCCCH------
Q 014285 141 PTTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG----A--SNSLSTAIT---IPAVSP------ 205 (427)
Q Consensus 141 ~~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg----~--~~~ip~~~~---i~~~~~------ 205 (427)
+.+++.+| . ...+++++|||+||||++||..|+|||+|||| . ++++|+|.+ ++..++
T Consensus 77 ~~~~~~~~-------~-~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~~~~~~~vp~~~s~~~~~~~~~~~~~~~ 148 (392)
T 3p3b_A 77 LLDLFDDR-------G-RLREAYRLQLEYPVLDWLGQRQGKPVYDLVSGAHLETGASLVVPCYDTSLYFDDLHLADERAA 148 (392)
T ss_dssp GGGGBCTT-------S-CBCGGGHHHHHHHHHHHHHHHHTCBHHHHHC--------CEEEEEEEEEECBTTTTCCSHHHH
T ss_pred HHHHHHHH-------h-HHHHHHHHHHHHHHHHHHHHHcCCcHHHHhcCccccccccCCcceeEeecccCCCCcccccch
Confidence 88877665 2 22467899999999999999999999999999 5 678999964 445678
Q ss_pred -HHHHHHHHHHhhcCCcEEEEeccC---------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCC
Q 014285 206 -AEASELASKYCKLGFSTLKLNVGR---------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMG 274 (427)
Q Consensus 206 -~~~~~~~~~~~~~Gf~~iKlKiG~---------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~ 274 (427)
+++.+.+++++++||+++|+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+++++.|++++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~ 228 (392)
T 3p3b_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVN 228 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 889999999999999999999996 57889999999999 6899999999999999999999999999998
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhccc-----cCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHH
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARDT-----YGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKA 349 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~~-----~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~ 349 (427)
+ .|||||++ +|++++++|++ + +++||++|| +.+..+++++++.+++|++++|++++|++++++++++
T Consensus 229 i--~~iE~P~~-~d~~~~~~l~~----~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik~~~~Git~~~~i~~~ 300 (392)
T 3p3b_A 229 L--YWLEEAFH-EDEALYEDLKE----WLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQYDIIWPGFTHWMELGEK 300 (392)
T ss_dssp E--EEEECSSS-CCHHHHHHHHH----HHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECCBTTTBCHHHHHHHHHH
T ss_pred C--CEEecCCc-ccHHHHHHHHH----hhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEeCccccCHHHHHHHHHH
Confidence 7 59999999 99999999986 5 789999999 9999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 350 TRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 350 A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
|+++|+++++| +.||+++++|++|++++++|+.+.|++.+ +..+++.+++.++||++.+|++||||+++|++++
T Consensus 301 A~~~gi~~~~h-~~es~i~~~a~l~laa~~~~~~~~e~~~~--~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 374 (392)
T 3p3b_A 301 LDAHGLRSAPH-CYGNAYGIYASGHLSAAVRNFEFVEYDDI--TIEGMDVSGYRIENGEIHVPATPGFGIVFDDELV 374 (392)
T ss_dssp HHHTTCEECCB-CCSCTHHHHHHHHHGGGCTTBCCEEECCE--EETTEECTTCEEETTEEEECCSSBTSCEECHHHH
T ss_pred HHHcCCEEEec-CCCCHHHHHHHHHHHHhCCCCceeeccch--hhHhhccCCCcccCCEEECCCCCccceeECHHHH
Confidence 99999999999 88999999999999999999888888876 4677887889999999999999999999999865
No 92
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=100.00 E-value=3.9e-62 Score=497.72 Aligned_cols=343 Identities=15% Similarity=0.194 Sum_probs=297.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||++|+++.+.+|..+|+ ..++|+|+|++|++||||+++..+.+.+ .....++++.|.|+|+++.++
T Consensus 3 MkI~~i~~~~~~~~~~~~~----------~~v~V~v~td~G~~G~Ge~~~~~g~~~~--~~~~~i~~l~p~l~G~d~~~~ 70 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSGQ----------RPILVKVSTDEGIYGLGEAGIAYGVGGS--AAAGILKDYAALLIGEDPFNT 70 (403)
T ss_dssp CCEEEEEEEEECCCTTTCC----------CCEEEEEEETTSCEEEEEESCSSSSCHH--HHHHHHHHHHHHHTTCCTTCH
T ss_pred CeEEEEEEEEecCCCCCCc----------cceEEEEEeCCCCEEEEeecCCCCCchH--HHHHHHHHHHHHcCCCCHHHH
Confidence 8999999999987533332 2589999999999999999432222222 233345568999999999999
Q ss_pred HHHHHHHHHHCCC-----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeee-ec--CC-------CHHHH
Q 014285 145 NFALDEIARILPG-----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAIT-IP--AV-------SPAEA 208 (427)
Q Consensus 145 ~~~~~~l~~~~~g-----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~-i~--~~-------~~~~~ 208 (427)
+.+|+.|.+...+ ...+++++||||||||++||..|+|||+||||. ++++|+|.+ ++ .. +++++
T Consensus 71 ~~i~~~l~~~~~~~~~~~~~~~~a~~aid~AlwDl~gk~~g~Pl~~llGg~~~~~vp~y~~~i~~g~~~~~~~~~~~e~~ 150 (403)
T 2ox4_A 71 EAIWEKLFKKTFWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLGGKNREDLRVYASQLQFGWGKERKSKGRKEEY 150 (403)
T ss_dssp HHHHHHHHHSSSGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSSEEEEEECGGGCSSSSCCCCCSHHHH
T ss_pred HHHHHHHHHhcccccCCcHHHHhHHHHHHHHHHHHhHhHcCCcHHHHcCCCCCCceeeeEeeccCCccccccccCCHHHH
Confidence 9999999864321 124689999999999999999999999999997 678999987 54 24 89999
Q ss_pred HHHHHHHhhcCCcEEEEec------cC-------------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHH
Q 014285 209 SELASKYCKLGFSTLKLNV------GR-------------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLG 268 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKi------G~-------------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~ 268 (427)
.+.+++++++||+++|+|+ |. +++.|++++++||+ +++++.|++|+|++|++++|+++++
T Consensus 151 ~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~~~ai~~~~ 230 (403)
T 2ox4_A 151 AEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDLVSAIQFAK 230 (403)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHH
Confidence 9999999999999999997 53 45779999999999 6899999999999999999999999
Q ss_pred HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHH
Q 014285 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQII 347 (427)
Q Consensus 269 ~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~ 347 (427)
.|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++++|++++| ++++++++
T Consensus 231 ~l~~~~i--~~iE~P~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~ 304 (403)
T 2ox4_A 231 AIEEFNI--FFYEEINTPLNPRLLKEAKK----KIDIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIA 304 (403)
T ss_dssp HHGGGCE--EEEECCSCTTSTHHHHHHHH----TCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHH
T ss_pred HHHhhCC--CEEeCCCChhhHHHHHHHHH----hCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHH
Confidence 9999987 59999999999999999986 68999999999999999999999999999999999998 99999999
Q ss_pred HHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCC--cccccCCCCCceeeeCcEEecCCCCCcccccCCCc
Q 014285 348 KATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTP--FLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTI 425 (427)
Q Consensus 348 ~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p--~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~ 425 (427)
++|+++|+++++|++. |+|++++++|++++++|+.++|+... ..+..+++.+++.++||++.+|++||||+|+|+++
T Consensus 305 ~~A~~~g~~~~~h~~~-s~i~~aa~~hlaaa~~~~~~~e~~~~~~~~~~~d~~~~~~~~~~G~~~~p~~PGlGv~~d~~~ 383 (403)
T 2ox4_A 305 DMAHIFEVTVQAHVAG-TGVAEAASLHAEIAIPNFCIHEHHQKTLLPEYEELCVHNYQPVKGRYKVPELPGIGQDITEKL 383 (403)
T ss_dssp HHHHHTTCEECCCCCS-CHHHHHHHHHHHHTCSSBCCEEEEGGGGSHHHHTTBSCCCCCBTTEECCCCSSBTSCCBCGGG
T ss_pred HHHHHcCCEEeecCCC-CHHHHHHHHHHHHhCCCcceeeeccccccchHHHhccCCceecCCEEECCCCCCCCcccCHHH
Confidence 9999999999999985 99999999999999999888876321 11346778788889999999999999999999998
Q ss_pred C
Q 014285 426 V 426 (427)
Q Consensus 426 v 426 (427)
+
T Consensus 384 l 384 (403)
T 2ox4_A 384 Y 384 (403)
T ss_dssp G
T ss_pred H
Confidence 6
No 93
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=100.00 E-value=1.3e-62 Score=490.87 Aligned_cols=322 Identities=15% Similarity=0.125 Sum_probs=285.8
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCC--CCcchHH-HHHHHHHHhhHhcCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPL--VTGDQTK-ALVKVREACQFLRQSPP 141 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~--~s~~~~~-~~~~~~~~~~~l~g~~~ 141 (427)
|||++++++.+++|++.||.++.++++.++.++|+|+|++|++||||+.+.+. |+++..+ ....++++.|.|+|+++
T Consensus 2 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~~~e~~~~~~~~l~~~~~~l~G~d~ 81 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQTDWYDHETIASVKHVIEQWFEDNRNKSF 81 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCCEEEEECCCBSSTTSCSCBHHHHHHHHHHHHHHHTTCCB
T ss_pred cEEEEEEEEEEeecccCCeecccEEEEeeeEEEEEEEECCCCEEEEEecCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCc
Confidence 89999999999999999999999999999999999999999999999998753 6664433 33445655599999999
Q ss_pred CCHHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeee-cCCCHHHHHHHHHHHhhcCC
Q 014285 142 TTLNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITI-PAVSPAEASELASKYCKLGF 220 (427)
Q Consensus 142 ~~~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i-~~~~~~~~~~~~~~~~~~Gf 220 (427)
.+++.+|+.|.+. .| .+++++|||+||||++||..|+ ++|+|+++ +..+ +++ ++++++||
T Consensus 82 ~~~~~l~~~l~~~-~g--~~~a~said~ALwDl~gk~~g~-----------~v~~~~~~~g~~~-e~~----~~~~~~G~ 142 (342)
T 2okt_A 82 ETYEAALKLVDSL-EN--TPAARATIVMALYQMFHVLPSF-----------SVAYGATASGLSN-KQL----ESLKATKP 142 (342)
T ss_dssp CSHHHHHHTTGGG-TT--CHHHHHHHHHHHHHTTCCCCCE-----------EEECEEEESSCCH-HHH----HHHHHHCC
T ss_pred CCHHHHHHHHHHh-hc--ChHHHHHHHHHHHHHhhhhhCc-----------eEeeeEEEecCCH-HHH----HHHHHcCC
Confidence 9999999988654 34 4689999999999999999987 79999988 7655 555 56678899
Q ss_pred cEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhc
Q 014285 221 STLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFAR 300 (427)
Q Consensus 221 ~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r 300 (427)
++||+|+| ++ |++++++||+..|+++||||||++|++++| +++++|+++++ .|||||++++|++++++ .
T Consensus 143 ~~~KiKvg--~~-d~~~v~avr~~~~~~~l~vDaN~~~~~~~A-~~~~~l~~~~i--~~iEqP~~~~d~~~~~~-~---- 211 (342)
T 2okt_A 143 TRIKLKWT--PQ-IMHQIRVLRELDFHFQLVIDANESLDRQDF-TQLQLLAREQV--LYIEEPFKDISMLDEVA-D---- 211 (342)
T ss_dssp SEEEEECC--TT-HHHHHHHHTTSSSCCEEEEECTTCCCGGGH-HHHHHHGGGCE--EEEECCCSSGGGGGGSC-T----
T ss_pred cEEEEEeC--HH-HHHHHHHHHHhCCCCeEEEECCCCCCHHHH-HHHHHHhhCCC--cEEECCCCCccHHHHHH-h----
Confidence 99999999 68 999999999955999999999999999999 99999999987 59999999999999987 3
Q ss_pred cccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhc
Q 014285 301 DTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGL 379 (427)
Q Consensus 301 ~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal 379 (427)
++++|||+||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++||++||+|+++|++|+++++
T Consensus 212 -~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~i~~aa~~hlaa~~ 290 (342)
T 2okt_A 212 -GTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGGMYEYGLSRYFTAMLARKG 290 (342)
T ss_dssp -TSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBCSSCCHHHHHHHHHHHTTS
T ss_pred -cCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCCCEEEEcCCcccHHHHHHHHHHHHhc
Confidence 58999999999999999999999999999999999997 9999999999999999999999999999999999999987
Q ss_pred --CCcceecc-CCCcccccCCCCCceeeeCcEEecCCCCCcccccC
Q 014285 380 --GCIKYVNL-NTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLK 422 (427)
Q Consensus 380 --~~~~~~e~-~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d 422 (427)
++ ++ +++..+.++++.+++.++||++.+ +.||+|+++.
T Consensus 291 ~~~~----~l~~~~~~~~~d~~~~~~~~~~G~~~~-~~PGlg~~~~ 331 (342)
T 2okt_A 291 DYPG----DVTPAGYYFEQDVVAHSGILKEGRLEF-RPPLVDITQL 331 (342)
T ss_dssp SSCC----BCCCTTSSCSSCSSTTTTEEETTEEEE-CCCCCCGGGC
T ss_pred cccc----ccCCchhhhhccccCCCceEECCEEEe-CcccCCHHHc
Confidence 33 23 555556788888889999999999 8899999985
No 94
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=100.00 E-value=1.1e-61 Score=492.20 Aligned_cols=339 Identities=19% Similarity=0.262 Sum_probs=292.8
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCc-chHHHHHHHHH-HhhHhcCCCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTG-DQTKALVKVRE-ACQFLRQSPPT 142 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~-~~~~~~~~~~~-~~~~l~g~~~~ 142 (427)
|||++++++.+++|++.||+++.++++.++.++|+|+|++|++||||+.+... +. ........+++ +.|.|+|+++.
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~g~-~~~~~~~~~~~i~~~l~p~l~G~d~~ 81 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGEVGLGFIQTLFN-PLPDQQEIESVFEHEVWPSLKGNRAI 81 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEEESSS-CCCCHHHHHHHHHHHTHHHHTTSCHH
T ss_pred CEEEEEEEEEEEeccCCceecccceecccceEEEEEEECCCCEEEEEeccCCC-ccccHHHHHHHHHHHHHHHHcCCCHH
Confidence 89999999999999999999999999999999999999999999999987321 10 01123344555 78999998775
Q ss_pred CHHHHHHHHHHHCCCC---hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCC--CHHHHHHHHHHHhh
Q 014285 143 TLNFALDEIARILPGS---EFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAV--SPAEASELASKYCK 217 (427)
Q Consensus 143 ~~~~~~~~l~~~~~g~---~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~--~~~~~~~~~~~~~~ 217 (427)
++ +..+.....+. ..+++++||||||||++||..|+|||+||||.++++|+|.+++.. +++++.+.++++++
T Consensus 82 ~~---~~~~~~~~~~~~~~l~~~a~~aid~AlwDl~~k~~g~Pl~~lLGg~~~~vp~y~~~~~~~~~~~~~~~~a~~~~~ 158 (389)
T 2oz8_A 82 AL---VHRVNRPRGGNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLGSRRNRVKAYASGLDFHLDDDAFVSLFSHAAS 158 (389)
T ss_dssp HH---TTCCCCCC------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTTCSCSEEEEEEECCBTTCCHHHHHHHHHHHHH
T ss_pred HH---HHHHhccCCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCCCceEEEEeCCCcCCCHHHHHHHHHHHHH
Confidence 44 21110000111 035789999999999999999999999999999999999887653 89999999999999
Q ss_pred cCCcEEEEeccC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhh--CCCCCceEeCCCCCCChhhHH
Q 014285 218 LGFSTLKLNVGR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLND--MGVIPVLFEQPVHRDDWSGLH 293 (427)
Q Consensus 218 ~Gf~~iKlKiG~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~--~~l~~~~iEqP~~~~d~~~~~ 293 (427)
+||+++|+|+|. +++.|++++++||+. ++++.|+||+|++|++++|+++++.|++ +++ .|||||++++|+++++
T Consensus 159 ~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i--~~iEqP~~~~~~~~~~ 236 (389)
T 2oz8_A 159 IGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDL--LWVEDPILRHDHDGLR 236 (389)
T ss_dssp TTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCC--SEEESCBCTTCHHHHH
T ss_pred hCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCc--eEEeCCCCCcCHHHHH
Confidence 999999999997 889999999999994 7899999999999999999999999999 886 5999999999999999
Q ss_pred HHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEc-ccCchhHHHH
Q 014285 294 DVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMID-GMIETRLATG 370 (427)
Q Consensus 294 ~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~-s~~es~ig~~ 370 (427)
+|++ ++ ++||++||++ +..+++++++.+++|++++| | ++++++++++|+++|+++++| ++.|
T Consensus 237 ~l~~----~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik----GGit~a~~i~~~A~~~gi~~~~~~~~~e------ 301 (389)
T 2oz8_A 237 TLRH----AVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIGNTFLE------ 301 (389)
T ss_dssp HHHH----HCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEECCCGGG------
T ss_pred HHHh----hCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC----cCHHHHHHHHHHHHHcCCeEeecccHHH------
Confidence 9986 67 8999999999 99999999999999999999 7 999999999999999999999 7765
Q ss_pred HHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 371 FALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 371 a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+++|++++++++.+.|+. ++ +..+++.+++.++||++.+|++||||+++|++.|
T Consensus 302 a~lhlaaa~~~~~~~e~~-~~-~~~~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 355 (389)
T 2oz8_A 302 AGVHMAVALPEVEWLEYS-FQ-NFDHLVEQPIEIRDGYAYAPDRPGHGLVLSEKAR 355 (389)
T ss_dssp TTHHHHHHSTTEEEEEEC-CC-SCGGGBSSCCCEETTEEECCSSSBTSCCBCHHHH
T ss_pred HHHHHHhcCCCCceeecc-hH-HHhhhccCCceEECCEEECCCCCcCCCccCHHHH
Confidence 688999999998888865 32 3466777888999999999999999999999865
No 95
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=100.00 E-value=3.2e-61 Score=491.94 Aligned_cols=336 Identities=19% Similarity=0.248 Sum_probs=292.4
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||++|+++.+. |. . +.++|+|+|++| +||||+ +. +.+ .......++++.|.|+|+++.++
T Consensus 6 MkI~~i~~~~~~-~~-~------------~~v~V~v~td~G-~G~Ge~-~~-g~~--~~~~~~~i~~l~p~liG~d~~~~ 66 (410)
T 2qq6_A 6 PRITRVETAAIR-AV-G------------PSVLVRVWAGDE-HGLGEC-YP-SAP--AAGIHHIVMNMEEQLLGEDPRDV 66 (410)
T ss_dssp CCCCEEEEEEEC-CC--------------CEEEEEEEETTE-EEEEEE-CC-CSC--HHHHHHHHHTTHHHHTTCCTTCH
T ss_pred ceEeEEEEEEEC-CC-C------------CEEEEEEEECCc-EEEEEe-cC-CCC--hHHHHHHHHHHHHHhCCCCccHH
Confidence 899999999986 43 1 148999999999 999999 52 111 22233345568899999999999
Q ss_pred HHHHHHHHHHCCC-----ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecC--C-------------
Q 014285 145 NFALDEIARILPG-----SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPA--V------------- 203 (427)
Q Consensus 145 ~~~~~~l~~~~~g-----~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~--~------------- 203 (427)
+.+|+.|.+...+ ...+++++||||||||++||..|+|||+||||. ++++|+|.+++. .
T Consensus 67 ~~i~~~l~~~~~~~~~~~~~~~~A~~aid~AlwDl~gk~~g~Pl~~lLGg~~~~~vp~y~~~~~g~~~h~~~~~~~~~~~ 146 (410)
T 2qq6_A 67 ERLYEKMRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLGGAFRRRVRLYADCNAGTVDAAAHHIEGGLFE 146 (410)
T ss_dssp HHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTTCCSCSEEEEEEECCCSEECTTCCEEECCTTC
T ss_pred HHHHHHHHHhhhcccCCchHHHHHHHHHHHHHHHHhHhHcCCcHHHHcCCCccCceeEEEeccccccccccccccccccc
Confidence 9999999875321 234689999999999999999999999999996 789999987642 3
Q ss_pred --CHHHHHHHHHHHhhcCCcEEEEec----cC-------------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHH
Q 014285 204 --SPAEASELASKYCKLGFSTLKLNV----GR-------------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEA 263 (427)
Q Consensus 204 --~~~~~~~~~~~~~~~Gf~~iKlKi----G~-------------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A 263 (427)
+++++.+.+++++++||+++|+|+ |. +++.|++++++||+ +++++.|+||+|++|++++|
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~~~a 226 (410)
T 2qq6_A 147 EGSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDIPSS 226 (410)
T ss_dssp STHHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 788899999999999999999999 64 45779999999999 68999999999999999999
Q ss_pred HHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHH
Q 014285 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLG 342 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~ 342 (427)
+++++.|+++++ .|||||++++|++++++|++ ++++||++||++.+..+++++++.+++|++++|++++| +++
T Consensus 227 ~~~~~~l~~~~i--~~iEeP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 300 (410)
T 2qq6_A 227 IRFARAMEPFGL--LWLEEPTPPENLDALAEVRR----STSTPICAGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLAE 300 (410)
T ss_dssp HHHHHHHGGGCC--SEEECCSCTTCHHHHHHHHT----TCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHH
T ss_pred HHHHHHHhhcCC--CeEECCCChhhHHHHHHHHh----hCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHHH
Confidence 999999999997 49999999999999999985 68999999999999999999999999999999999998 999
Q ss_pred HHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCC-cccccCCCC--CceeeeCcEEecCCCCCccc
Q 014285 343 TLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTP-FLLSEDPFV--GGCEVSGAIYNFTNARGQGG 419 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p-~~~~~~~~~--~~~~~~~G~i~~p~~pGlGv 419 (427)
+++++++|+++|+++++|++. |+|++++++|++++++|+.++|+... ..+..+++. +++.++||++.+|++||||+
T Consensus 301 ~~~ia~~A~~~g~~~~~h~~~-s~i~~aa~~hlaaa~~~~~~~e~~~~~~~~~~d~~~~~~~~~~~~G~i~~p~~PGlGv 379 (410)
T 2qq6_A 301 AKRIANLAELDYIPFAPHNVS-SPVGTVAAAHVCAAVSNFAVLEWHAIDMPHWEDFVRYPGGPVIREGHIELTEEPGLGL 379 (410)
T ss_dssp HHHHHHHHHTTTCCBCCBCCS-CHHHHHHHHHHHHSCTTBCCEEECCTTCTTGGGGBCCSSSSSEETTEEECCSSSGGGC
T ss_pred HHHHHHHHHHcCCeEeecCCC-cHHHHHHHHHHHHhCCCceeeecccccchhhhhhcccCCCceeeCCEEECCCCCCCCc
Confidence 999999999999999999985 99999999999999999888776321 112467776 78889999999999999999
Q ss_pred ccCCCcC
Q 014285 420 FLKWTIV 426 (427)
Q Consensus 420 e~d~~~v 426 (427)
|+|++++
T Consensus 380 ~~d~~~l 386 (410)
T 2qq6_A 380 ELDEEAA 386 (410)
T ss_dssp CBCHHHH
T ss_pred eeCHHHH
Confidence 9998865
No 96
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3.9e-62 Score=497.33 Aligned_cols=348 Identities=19% Similarity=0.262 Sum_probs=298.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchH---HHHHHHH-HHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQT---KALVKVR-EACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~---~~~~~~~-~~~~~l~g~~ 140 (427)
|||++++++.+++|++.||.++. ++.++|+|+|+ |++||||+.+.+.+ ++.. .....++ .++|.|+|+
T Consensus 3 mkI~~i~~~~~~~pl~~p~~~s~-----~~~~~V~v~td-G~~G~GE~~~~~~~-~~~~~~~~~~~~i~~~l~~~l~G~- 74 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGS-----QDALLVRVAAG-GHIGWGECEAAPLP-SIAAFVCPKSHGVCRPVSDSVLGQ- 74 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGG-----GEEEEEEEEET-TEEEEEEECSCHHH-HHHHHHCCCSBTTBCCGGGGTTTC-
T ss_pred CEEEEEEEEEEeccCCCcccccc-----ceEEEEEEEeC-CcEEEEeeecccCC-cccchhHHHHHHHHHHHHHHhCCC-
Confidence 89999999999999999999986 77899999999 99999999875421 1111 1112234 378999999
Q ss_pred CCCHHH-HHHHHHHH-CCC-Chhhh--HHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeee-cCCCHHHHHHHHH
Q 014285 141 PTTLNF-ALDEIARI-LPG-SEFAS--VRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITI-PAVSPAEASELAS 213 (427)
Q Consensus 141 ~~~~~~-~~~~l~~~-~~g-~~~~~--a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i-~~~~~~~~~~~~~ 213 (427)
+.+++. +++.+... ..| ...++ +++||||||||++||..|+|||+||||. ++++|+|.++ +..+++++.+.++
T Consensus 75 ~~~~~~~l~~~~~~~~~~g~~~~~~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~vp~~~~~~~~~~~~~~~~~a~ 154 (401)
T 2hzg_A 75 RLDGPDDIARIAALVGYNSMDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLGYSASHGKRPYASLLFGDTPQETLERAR 154 (401)
T ss_dssp BCSSHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCSCCCCBEEEEEEECCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHHHHhCCcHHHHcCCCCCCceEeeEEcCCCCCHHHHHHHHH
Confidence 888752 22222111 012 12357 8999999999999999999999999997 4899999654 4678999999999
Q ss_pred HHhhcCCcEEEEe---ccCCc-hhhHHHHHHHHH-hCCCcEEEEeCCCCC--CHHHHHHHHHHhhhCCCCCceEeCCCCC
Q 014285 214 KYCKLGFSTLKLN---VGRNI-TADFDVLQAIHA-VHPHCSFILDANEGY--TSEEAVEVLGKLNDMGVIPVLFEQPVHR 286 (427)
Q Consensus 214 ~~~~~Gf~~iKlK---iG~~~-~~d~~~l~~ir~-~~~~~~L~vDAN~~~--s~~~A~~~l~~L~~~~l~~~~iEqP~~~ 286 (427)
+++++||+++|+| +|.++ +.|++++++||+ .++++.|+||+|++| ++++|+++++.|+++++ .|||||+++
T Consensus 155 ~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~ 232 (401)
T 2hzg_A 155 AARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGV--LWLEEPFDA 232 (401)
T ss_dssp HHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTC--SEEECCSCT
T ss_pred HHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCC--CEEECCCCc
Confidence 9999999999999 99888 999999999999 589999999999999 99999999999999997 499999999
Q ss_pred CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCch
Q 014285 287 DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIET 365 (427)
Q Consensus 287 ~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es 365 (427)
+|++++++|++ .++++||++||++.+..+++++++.+++|++++|++++| ++++++++++|+++|+++++| ++||
T Consensus 233 ~d~~~~~~l~~---~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h-~~es 308 (401)
T 2hzg_A 233 GALAAHAALAG---RGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH-TFTS 308 (401)
T ss_dssp TCHHHHHHHHT---TCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC-CCSC
T ss_pred cCHHHHHHHHh---hCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC-CCCc
Confidence 99999999973 057899999999999999999999999999999999997 999999999999999999999 8899
Q ss_pred hHHHHHHHHHHhhcCCcceeccCCC-cccccCCCCCceeee-CcEEecCCCCCcccccCCCcC
Q 014285 366 RLATGFALHLAAGLGCIKYVNLNTP-FLLSEDPFVGGCEVS-GAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 366 ~ig~~a~~hlaaal~~~~~~e~~~p-~~~~~~~~~~~~~~~-~G~i~~p~~pGlGve~d~~~v 426 (427)
+++++|++|++++++|+.++|++.. ..+.++++.+++.++ ||++.+|++||||+++|++++
T Consensus 309 ~i~~~a~~hlaaa~~~~~~~e~~~~~~~~~~d~~~~~~~~~~~G~~~~p~~PGlGv~~d~~~l 371 (401)
T 2hzg_A 309 HLALSASLQPFAGLEADRICEYPAAPQQLALDITGDHIRPDAEGLIRAPEAPGLGLQVAASAL 371 (401)
T ss_dssp HHHHHHHHGGGTTCTTCCEEEEESSCCHHHHHTBSSCCCCCTTSCBCSCSSSBTSCCBCHHHH
T ss_pred HHHHHHHHHHHHhCCCceeeeccCCcchHHHHhccCCceeccCCeEECCCCCcCCceECHHHH
Confidence 9999999999999999888876421 113567777888899 999999999999999998865
No 97
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=100.00 E-value=1.7e-60 Score=483.88 Aligned_cols=340 Identities=17% Similarity=0.170 Sum_probs=286.1
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEc---CCceEEEEeecCCCCCcchHHHHHHHHH-HhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELS---NGCVGWGEVAVVPLVTGDQTKALVKVRE-ACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~---~G~~G~GE~~~~~~~s~~~~~~~~~~~~-~~~~l~g~~ 140 (427)
|||++++ .+++|++.||.++.++++.++.++|+|+|+ +|.+||||+.+ +++.+.. ...+++ ++|.|+|++
T Consensus 6 mkI~~i~--~~~~pl~~p~~~~~~~~~~~~~~~V~v~td~~~~G~~G~GE~~~--~~~~~~~--~~~i~~~l~~~l~G~d 79 (392)
T 1tzz_A 6 VRIVDVR--EITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFN--SNGRYGQ--GGLIRERFASRILEAD 79 (392)
T ss_dssp CCEEEEE--EEEEECCC---------CCCEEEEEEEEEEEECSSSEEEEEEEC--CTTSCCC--HHHHHHTHHHHHHTSC
T ss_pred cEEeEEE--EEEecCCCcccccccccCcceEEEEEEEECCCCCCCEEEEEecC--CCchHHH--HHHHHHHHHHHHcCCC
Confidence 8999999 788999999999999999999999999999 99999999986 2233221 222443 789999999
Q ss_pred C----------CCHHHHHHHHHHHCC--CC-hhhhHHHHHHHHHHHHHHhhCCCChhhhhC----C-CCCceeeeeeecC
Q 014285 141 P----------TTLNFALDEIARILP--GS-EFASVRAGVEMALIDAVANSIDIPLWRLFG----G-ASNSLSTAITIPA 202 (427)
Q Consensus 141 ~----------~~~~~~~~~l~~~~~--g~-~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg----g-~~~~ip~~~~i~~ 202 (427)
+ .+++.+|+.|.+... +. ..+++++||||||||++||..|+|||+||| | .++++|+|.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~a~~aid~AlwDl~ak~~g~Pl~~llG~~~~g~~~~~v~~y~~~~~ 159 (392)
T 1tzz_A 80 PKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERHGVKANPRVFVYAAGGY 159 (392)
T ss_dssp GGGSBCTTSSSBCHHHHHHHHTTTCCSCCCSHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHHTTSCCCCEEEEEEECCC
T ss_pred chhhhcccccccCHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHHcCCcHHHHcCCccCCCcCCCeeEEEeCCc
Confidence 9 999999999976422 21 357899999999999999999999999999 8 5788999876432
Q ss_pred ----CCHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 203 ----VSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 203 ----~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
.+++++.+.+++++++||+++|+|+|. +++.|++++++||+ .++++.|+||+|++|++++|+++++.|+++++
T Consensus 160 ~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i- 238 (392)
T 1tzz_A 160 YYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPL- 238 (392)
T ss_dssp C----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCC-
T ss_pred ccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCC-
Confidence 378999999999999999999999996 78999999999999 58999999999999999999999999999997
Q ss_pred CceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcC----CCcEEEeCCCCcc-HHHHHHHHHHHH
Q 014285 277 PVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN----LASVVNIKLAKFG-VLGTLQIIKATR 351 (427)
Q Consensus 277 ~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~----a~~~i~lk~~~~G-i~~~~~~~~~A~ 351 (427)
.|||||++++|++++++|++ ++++||++||++.+..+++++++.+ ++|++++|++++| ++++++++++|+
T Consensus 239 -~~iEqP~~~~d~~~~~~l~~----~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~~A~ 313 (392)
T 1tzz_A 239 -FWYEEVGDPLDYALQAALAE----FYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVLK 313 (392)
T ss_dssp -SEEECCSCTTCHHHHHHHTT----TCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHHHH
T ss_pred -CeecCCCChhhHHHHHHHHh----hCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHHHHH
Confidence 49999999999999999975 6899999999999999999999999 9999999999997 999999999999
Q ss_pred HcCCc---EEEcccCchhHHHHHHHHHHhhcCCc---ceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCc
Q 014285 352 KSGLH---LMIDGMIETRLATGFALHLAAGLGCI---KYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTI 425 (427)
Q Consensus 352 ~~gi~---~~~~s~~es~ig~~a~~hlaaal~~~---~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~ 425 (427)
++|++ +++|+ . + .+.+|+++++++. .+.|++.|+ .+++. ++.++||++.+|++||||+++|++.
T Consensus 314 ~~gi~~~~~~~~~---~--~-~~~~hl~aa~~~~~~~~~~~~~~~~---~~~~~-~~~~~~G~~~~p~~PGlGv~~d~~~ 383 (392)
T 1tzz_A 314 THGWSPSRCIPHG---G--H-QMSLNIAAGLGLGGNESYPDLFQPY---GGFPD-GVRVENGHITMPDLPGIGFEGKSDL 383 (392)
T ss_dssp HTTCCGGGBCCSC---C--B-HHHHHHHHHHTCSCEEECTTCSTTT---BSCST-TCCCBTTEEECCCCSBTSGGGCHHH
T ss_pred HCCCCCceEeecH---H--H-HHHHHHHHhCCCccccccccccchH---HhccC-CcceeCCEEECCCCCccCCccCHHH
Confidence 99999 99995 1 1 2358999998875 334655543 34455 7888999999999999999999986
Q ss_pred C
Q 014285 426 V 426 (427)
Q Consensus 426 v 426 (427)
+
T Consensus 384 ~ 384 (392)
T 1tzz_A 384 Y 384 (392)
T ss_dssp H
T ss_pred H
Confidence 5
No 98
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=100.00 E-value=2.4e-60 Score=481.64 Aligned_cols=316 Identities=18% Similarity=0.255 Sum_probs=265.2
Q ss_pred ccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHH-HHHhhHhcCCCCCCHHHHHHHHHHHC--CC--
Q 014285 83 LSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPPTTLNFALDEIARIL--PG-- 157 (427)
Q Consensus 83 ~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~l~~~~--~g-- 157 (427)
++++.| .+.++.++|||+||+|++||||+.. ++. ....+ +.+.|.|+|+++.+++.+|+.|++.. .|
T Consensus 49 ~~ts~g-~~~~~~v~V~v~td~G~~G~Ge~~~-----g~~--~~~~i~~~l~p~LiG~dp~~ie~i~~~m~~~~~~~g~~ 120 (404)
T 3ekg_A 49 SRRSFG-INVLGTLVVEIEASDGNVGFAVTTG-----GEP--AAYIVEKHLARFLEGARVTDIERIWDQMYNSTLYYGRK 120 (404)
T ss_dssp CTGGGT-TTSSCEEEEEEEETTSCEEEEEEEC-----HHH--HHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHGGGCSS
T ss_pred cccccC-cccccEEEEEEEECCCCEEEEeCCC-----cHH--HHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhhhcCCC
Confidence 344555 4567889999999999999999863 211 11223 34889999999999999999998642 22
Q ss_pred ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccC-------
Q 014285 158 SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGR------- 229 (427)
Q Consensus 158 ~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~------- 229 (427)
....++++|||||||||+||.+|+|||+||||. ++++|+|.+.. +++ ..+++||+++|+|+|.
T Consensus 121 G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG~~r~~v~~y~~g~--~~~-------~~~~~Gf~~~K~Kv~~g~~~g~~ 191 (404)
T 3ekg_A 121 GLVINTISGVDLALWDLLGKVRREPVHQLLGGAVRDELQFYATGA--RPD-------LAQKMGFIGGKMPLHHGPSEGEE 191 (404)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSEEEEEEESS--CHH-------HHHHTTCSEEEEECCCCGGGHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCHHHHcCCCCCCeeEEecCCC--CHH-------HHHHcCCCEEEEecCCCCccccc
Confidence 234578999999999999999999999999997 78999997632 343 2347899999999964
Q ss_pred CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEE
Q 014285 230 NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVV 308 (427)
Q Consensus 230 ~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa 308 (427)
++++|++++++||+ .+|++.|+||||++|++++|++++++|+++++ .|||||++++|++++++|++.. .+++|||
T Consensus 192 ~~~~di~~v~avRea~G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l--~~iEeP~~~~d~~~~a~l~~~~--~~pi~Ia 267 (404)
T 3ekg_A 192 GLKKNLEELATMRERVGPDFWLMFDCWMSLDLNYATRLARGAREYGL--KWIEEALPPDDYWGYAELRRNA--PTGMMVT 267 (404)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTC--CEEECCSCTTCHHHHHHHHHHS--CTTCEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCeEEecCCCCCCHHHHHHHHHHHhhcCC--cEEecCCCcccHHHHHHHHHhc--CCCeEEE
Confidence 25789999999999 58999999999999999999999999999997 5999999999999999998721 2345699
Q ss_pred ecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceecc
Q 014285 309 ADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNL 387 (427)
Q Consensus 309 ~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~ 387 (427)
+||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++. .+++|++++++|+.+.|+
T Consensus 268 ~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~~h~~~------~a~~hl~aa~pn~~~~E~ 341 (404)
T 3ekg_A 268 TGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVVPHGSS------VYSYHFVATRQNSPFAEF 341 (404)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCCT------HHHHHHHTTCTTCCSEEE
T ss_pred ecCccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEEecCcH------HHHHHHHHhCCCcceeee
Confidence 9999999999999999999999999999997 999999999999999999999852 279999999999988775
Q ss_pred CC--C-----cccccCCCCCceeeeCcEEecC--CCCCcccccCCCc
Q 014285 388 NT--P-----FLLSEDPFVGGCEVSGAIYNFT--NARGQGGFLKWTI 425 (427)
Q Consensus 388 ~~--p-----~~~~~~~~~~~~~~~~G~i~~p--~~pGlGve~d~~~ 425 (427)
.. | ..+..+++.+++.++||++.+| ++||||+|+|+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~dG~i~vP~~~~PGLGveld~~~ 388 (404)
T 3ekg_A 342 LMMAPKADQVVPMFHPQLLGEPVPENGRMRLSRLDQPGFGVTLNPEC 388 (404)
T ss_dssp ECCSTTSCSCCCTTTTTEETCCCCBTTEEEGGGCCSSBTSCEECTTS
T ss_pred ccccccccccchhhhhcccCCCcccCCEEECCCCCCCcccceECccc
Confidence 32 1 1223455666677899999999 9999999999985
No 99
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=100.00 E-value=1.6e-60 Score=487.67 Aligned_cols=340 Identities=16% Similarity=0.197 Sum_probs=281.0
Q ss_pred ccccccccCC--cceeeEEEEEEEEEEeeccccccc-----cceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH
Q 014285 52 TSLGFKNLTE--TFWVDVQRAEGRELNVALSAPLSL-----GLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK 124 (427)
Q Consensus 52 ts~g~~~~~~--~~~~~I~~i~~~~~~~pl~~p~~~-----a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~ 124 (427)
.+.|.|+... +|.+. .+++.||++++.. +.|. ..++.++|||+||+|++||||+.+.+ .
T Consensus 23 ~~~~~~~~~~~~~~~~~------~~i~~p~~~~~~~~~~~ts~g~-~~~~~vlV~V~tddGi~G~Ge~~~~~-------~ 88 (455)
T 3fxg_A 23 GSGGDYHNVKGGHWLID------SDISTPASKWEQYKKSRTSWGI-NVLGSFLVEIEATDGTVGFATGFGGP-------P 88 (455)
T ss_dssp SCSSCTTCCCTTCHHHH------SCCCCTTTTSGGGTSCTTTTTT-TSSCEEEEEEEETTSCEEEEEEECHH-------H
T ss_pred cCCCCCCCCCCCccccc------ccccCccccccccccccccccc-ccceEEEEEEEECCCCEEEEeCcCCH-------H
Confidence 4566665553 55443 3466889888743 3332 24788999999999999999986321 1
Q ss_pred HHHHH-HHHhhHhcCCCCCCHHHHHHHHHHHC--CC--ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeee
Q 014285 125 ALVKV-REACQFLRQSPPTTLNFALDEIARIL--PG--SEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAI 198 (427)
Q Consensus 125 ~~~~~-~~~~~~l~g~~~~~~~~~~~~l~~~~--~g--~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~ 198 (427)
....+ +.+.|.|+|++|.+++.+|+.|++.. .| ....++++|||||||||+||.+|+|||+||||. +++||+|.
T Consensus 89 ~~~~i~~~lap~LiG~dp~~ie~i~~~m~~~~~~~g~~G~~~~A~sAID~ALwDl~gK~~g~Pv~~LLGG~~rd~vp~y~ 168 (455)
T 3fxg_A 89 ACWLVHQHFERFLIGADPRNTNLLFEQMYRASMFYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIGGATKERLDFYC 168 (455)
T ss_dssp HHHHHHHTTHHHHTTCCTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTCCSCSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCcchHHHHHHHHHHhhhhccCCcchHHHHHHHHHHHHHHHHHHcCCCHHHHhCCccCCeeEEee
Confidence 12223 45889999999999999999998753 22 233568999999999999999999999999997 78999998
Q ss_pred eecCCCHHHHHHHHHHHhhcCCcEEEEeccC-------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHh
Q 014285 199 TIPAVSPAEASELASKYCKLGFSTLKLNVGR-------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKL 270 (427)
Q Consensus 199 ~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L 270 (427)
+. .+++ ..+++||+++|+|+|. ++++|++++++||+ .+|++.||||||++|++++|++++++|
T Consensus 169 ~g--~~~~-------~~~~~Gf~~~KlKv~~~~~~G~~~~~~di~rv~avRea~G~d~~L~vDaN~~wt~~~Ai~~~~~L 239 (455)
T 3fxg_A 169 TG--PEPT-------AAKAMGFWGGKVPLPFCPDDGHEGLRKNVEFLRKHREAVGPDFPIMVDCYMSLNVSYTIELVKAC 239 (455)
T ss_dssp ES--SCHH-------HHHHHTCSCEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHT
T ss_pred cC--CCHH-------HHHHcCCCEEEEcCCCCcccccccHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHhc
Confidence 64 2343 2357899999999964 25789999999999 579999999999999999999999999
Q ss_pred hhCCCCCceEeCCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHH
Q 014285 271 NDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIK 348 (427)
Q Consensus 271 ~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~ 348 (427)
+++++ .|||||++++|+++|++|++ ++ .+|||+||++.+..+++++++.+++|++|+|++++| +++++++++
T Consensus 240 e~~~l--~~iEEPl~~dd~~~la~L~~----~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~~GGItea~kIa~ 313 (455)
T 3fxg_A 240 LDLNI--NWWEECLSPDDTDGFALIKR----AHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAA 313 (455)
T ss_dssp GGGCC--SEEECCSCGGGGGGHHHHHH----HCTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTTSSCHHHHHHHHH
T ss_pred ccCCc--ceecCCCCcchHHHHHHHHH----hCCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHH
Confidence 99997 59999999999999999986 45 589999999999999999999999999999999997 999999999
Q ss_pred HHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCC--Cc-----ccccCCCCCceeeeCcEEecC--CCCCccc
Q 014285 349 ATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNT--PF-----LLSEDPFVGGCEVSGAIYNFT--NARGQGG 419 (427)
Q Consensus 349 ~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~--p~-----~~~~~~~~~~~~~~~G~i~~p--~~pGlGv 419 (427)
+|+++|+++++|++. .+++|++++++|+.+.|+.. |. .+..+++.+++.++||++.+| ++|||||
T Consensus 314 lA~a~Gv~v~~H~~~------~aslHlaaa~pn~~~~E~~~~~~~~~~~~~~~~~l~~~~~~~~dG~i~vp~~d~PGLGv 387 (455)
T 3fxg_A 314 LAAAYDVPVVPHASG------PYSYHFQISQPNTPFQEYLANSPDGKSVLPVFGDLFIDEPIPTKGYLTTADLDKPGFGL 387 (455)
T ss_dssp HHHTTTCCBCCCSCT------HHHHHHHTTCTTCCCEEEECCSTTSSSCCCTTGGGBSCCCCCTTSEEETGGGCSSBTCC
T ss_pred HHHHcCCEEEecchH------HHHHHHHHhCCCCceEeecccccccccccchhcccccCCCeeeCCEEeCCCCCCCccCc
Confidence 999999999999863 37899999999998887532 21 122455656667899999999 9999999
Q ss_pred ccCCCcC
Q 014285 420 FLKWTIV 426 (427)
Q Consensus 420 e~d~~~v 426 (427)
|+|++++
T Consensus 388 elde~~~ 394 (455)
T 3fxg_A 388 TINPAAR 394 (455)
T ss_dssp CBCHHHH
T ss_pred ccCHHHH
Confidence 9999875
No 100
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=100.00 E-value=1.8e-60 Score=473.12 Aligned_cols=302 Identities=17% Similarity=0.194 Sum_probs=255.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTL 144 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~ 144 (427)
|||+ ++++++|++.||.++ ++++.++.++|+|+|++|++||||+.+.++++++..+. . +.+.+
T Consensus 2 MkI~---~~~~~~pl~~p~~~s-~~~~~~~~~~V~v~td~G~~G~GE~~~~~~~~~e~~~~--~---l~~~l-------- 64 (330)
T 3caw_A 2 IKIS---YSPYTLKPVQSLNAA-TAATAREGVLLKVEWNDGLYGFADLHPWPELGDLSLEE--Q---LSDLR-------- 64 (330)
T ss_dssp -CEE---EEEEEECBC-----------CEEEEEEEEECTTSCEEEEEECCCGGGTCCCHHH--H---HHHHH--------
T ss_pred cEEE---EEEEEeecCCCeEee-eEEEEeeEEEEEEEECCCCEEEEeecCCCCcCcccHHH--H---HHHHH--------
Confidence 6787 889999999999999 99999999999999999999999999877666644322 1 22222
Q ss_pred HHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeec-C--CCHHHHHHHHHHHhhcCCc
Q 014285 145 NFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIP-A--VSPAEASELASKYCKLGFS 221 (427)
Q Consensus 145 ~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~-~--~~~~~~~~~~~~~~~~Gf~ 221 (427)
| +...+++++|||+||||++||..|+|||+ || +++|+|++++ . .+++++. +++++||+
T Consensus 65 ------l-----~~~~~~a~said~AlwDl~gk~~g~Pl~~--Gg--~~v~~~~~~~~~~~~~~~~~~----~~~~~G~~ 125 (330)
T 3caw_A 65 ------M-----GRMTTQIEQSIWLARRDALLRKEKKHVFD--GG--EKIKNNYLLSHFQDLKPGFLD----GLKNEGYN 125 (330)
T ss_dssp ------H-----TCCCHHHHHHHHHHHHHHHHHHTTCBTTT--TS--CCCCBCEEECTTSCCCTTHHH----HHHHHTCC
T ss_pred ------h-----ccchHHHHHHHHHHHHHHHHHHcCCcccc--CC--CceEEEEEecCCCCCCHHHHH----HHHHcCCc
Confidence 1 11336799999999999999999999999 87 8999999988 6 6888776 55678999
Q ss_pred EEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhh---CCCCCceEeCCCCCC-ChhhHHHHHH
Q 014285 222 TLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLND---MGVIPVLFEQPVHRD-DWSGLHDVSN 297 (427)
Q Consensus 222 ~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~---~~l~~~~iEqP~~~~-d~~~~~~L~~ 297 (427)
+||+|+|.++++|++++++||+ |+++||||||++|++++|++++++|++ +++ .|||||++++ |++++ |+
T Consensus 126 ~~KiKvg~~~~~d~~~v~avr~--~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~l--~~iEqP~~~~~d~~~~--l~- 198 (330)
T 3caw_A 126 TVKVKMGRDLQKEADMLTHIAA--SGMRMRLDFNALGSWQTFEKFMVNLPLTVRPLI--EYVEDPFPFDFHAWGE--AR- 198 (330)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--TTCEEEEECTTCSCHHHHHHHHHTSCTTTGGGE--EEEECCSSCCHHHHHH--HT-
T ss_pred EEEEecCCCHHHHHHHHHHHhC--CCCeEEEECCCCCCHHHHHHHHHHhhhhccCCc--eEEECCCCCCccHHHH--HH-
Confidence 9999999999999999999999 999999999999999999999999999 886 5999999999 99988 53
Q ss_pred hhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHh
Q 014285 298 FARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAA 377 (427)
Q Consensus 298 ~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaa 377 (427)
++ +|||+||+ +..+++++++.+++|++|+|++++|++ +++++|+++|+++++||++||+||+++++|+++
T Consensus 199 ----~~-iPIa~dEs--~~~~~~~~i~~~a~d~v~~k~~~~Gi~---~i~~~A~~~gi~~~~~~~~es~ig~aa~~hlaa 268 (330)
T 3caw_A 199 ----KL-AKIALDNQ--YDKVPWGKIASAPFDVIVIKPAKTDVD---KAVAQCQKWNLKLAVTSYMDHPVGVVHAVGVAM 268 (330)
T ss_dssp ----TT-SCEEESTT--GGGCCTTTCSSCSCSEEEECTTTSCHH---HHHHHHHHTTCEEEEBCCSCCHHHHHHHHHHHH
T ss_pred ----hc-CcEEeCCC--CHHHHHHHHHcCCCCEEEechhhccHH---HHHHHHHHcCCcEEEeCccCcHHHHHHHHHHHc
Confidence 47 99999999 999999999999999999999999988 999999999999999999999999999999999
Q ss_pred ----hcCCccee--ccCCCcccccCCCCCceeeeCcEEecCCCCCcccc
Q 014285 378 ----GLGCIKYV--NLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGF 420 (427)
Q Consensus 378 ----al~~~~~~--e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve 420 (427)
+++|...+ |++.+++ .++++.+++.++||++.+|++||||+|
T Consensus 269 ~~~~a~~~~~~~~~dl~~~~~-~~d~~~~~~~~~~G~~~~p~~PGlGv~ 316 (330)
T 3caw_A 269 ELKDKYGDMILESGCLTHRLY-QMDSFAAELSTQGPYLLKNKGTGVGFD 316 (330)
T ss_dssp HHHHHHGGGBCCBBCCCGGGB-CCCTTGGGCCEETTEECCCSSSBTSCH
T ss_pred cchhcCCCcccccccCCchhh-hcccccCCceeECCEEECCCCCCCCHH
Confidence 88874332 4655443 678887888999999999999999998
No 101
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.3e-60 Score=468.61 Aligned_cols=319 Identities=21% Similarity=0.285 Sum_probs=268.7
Q ss_pred EEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHHHhh-HhcCCCCCCHH
Q 014285 68 QRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVREACQ-FLRQSPPTTLN 145 (427)
Q Consensus 68 ~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~~~~-~l~g~~~~~~~ 145 (427)
.+++++.+++||+.||++|.|+.++++.++|+|+ |+|++|||||+|+|.|+ ++.+ ....++.+.+ .+.+.+ .+
T Consensus 5 r~l~~~~~r~pl~~pF~is~g~~t~~~~v~V~i~-d~G~~G~GE~~p~~~~g-et~e~~~~~l~~~~~~~~~~~~---~~ 79 (329)
T 4gfi_A 5 RYLQATTERFAVAGSFTISRGTRTHADVVTCTIR-DGSFTGIGECVPYPRYG-ESIEGVTADIEAMADRVAAGLT---RQ 79 (329)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-ETTEEEEEEECCCGGGT-CCHHHHHHHHHTTHHHHHHTCC---HH
T ss_pred cEEEEEEEEEeccCcEEccCeEEEEeEEEEEEEE-ECCEEEEEeccCCCCCC-cCHHHHHHHHHHHhhhhccccc---hh
Confidence 5788899999999999999999999999999996 68999999999988765 3333 2233343333 333332 12
Q ss_pred HHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcCCcEEE
Q 014285 146 FALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLGFSTLK 224 (427)
Q Consensus 146 ~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iK 224 (427)
.. ...+ + .+++++||||||||+.||..|+|+|+|+||. ++++++|.+++..+++++..++.+ ..||+.+|
T Consensus 80 ~~----~~~~-~--~~~a~aaid~AlwDl~gk~~g~pl~~llgG~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~K 150 (329)
T 4gfi_A 80 EL----QQVM-K--PGAARNAVDCALWDLEAKMSGKRAAEQVLGQPAQPLVTAYTISLADPDTMAAKTAE--NAGRPLLK 150 (329)
T ss_dssp HH----HHHS-C--SSHHHHHHHHHHHHHHHHHHSCCHHHHHHSSCCCCEECCEEECCCCHHHHHHHHHH--TTTSSEEE
T ss_pred hH----Hhhc-c--cHHHHHHHHHHHHHHHhhhcCCChhHHhCCCCCCceeeeecccCCChHHHHHHHHh--hccccEEE
Confidence 11 1112 2 2578999999999999999999999998887 678999999999999988766543 57999999
Q ss_pred EeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC
Q 014285 225 LNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG 304 (427)
Q Consensus 225 lKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~ 304 (427)
+|+|. ++|+++++++|+++|+++||||||++||+++|+++++.|+++++. |||||++++|.+++.++ +++
T Consensus 151 ik~g~--~~d~~~v~~vr~~g~d~~l~vDaN~~w~~~~A~~~~~~l~~~~i~--~iEqP~~~~~~~~~~~~------~~~ 220 (329)
T 4gfi_A 151 IKTGT--ADDEARLRAVRAAAPEARIIIDANEGWNDDNIEYYLKLAAELKIS--LIEQPLPAGKDAMLARI------EHP 220 (329)
T ss_dssp EECCS--SCCHHHHHHHHHHCTTSEEEEECTTCCCTTTHHHHHHHHHHTTCC--EEECCSCTTSCGGGGGS------CCS
T ss_pred ecCCc--ccHHHHHHHHHHhccCCeEEEEcCCCCCHHHHHHHHHhhhhcCce--EEEecCCCccHHHHHHh------cCC
Confidence 99996 568999999999999999999999999999999999999999974 99999999988776543 578
Q ss_pred CeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcc
Q 014285 305 ISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383 (427)
Q Consensus 305 iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~ 383 (427)
+||++||++.+..++.+.+ +++|++|+|++++| ++++++++++|+++|+++++||++||+|+++|++|+++.+ .
T Consensus 221 ipia~dEs~~~~~d~~~~~--~a~d~i~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~~~es~i~~aa~~~la~~~---~ 295 (329)
T 4gfi_A 221 VLICADESVHSTEDLAGLR--DRYDAINIKLDKTGGLTEALVMKAEAERLGFTIMVGCMLGTSLGMAPAVLVAQGT---A 295 (329)
T ss_dssp SEEEESTTCCTGGGSGGGT--TTCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHHHHTTTC---S
T ss_pred CCchhccCCCCHHHHHHHh--hccCeEEecCceeCCHHHHHHHHHHHHHCCCEEEECCcchhHHHHHHHHHHHhCC---C
Confidence 9999999999999987654 67999999999997 9999999999999999999999999999999999998764 5
Q ss_pred eeccCCCcccccCCCCCceeeeCcEEecCCCCCc
Q 014285 384 YVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQ 417 (427)
Q Consensus 384 ~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGl 417 (427)
+.|+++|+.+.+|+. +..+.||.+.+|++|||
T Consensus 296 ~~dld~~~~l~~d~~--~~~~~dG~~~~P~~PGL 327 (329)
T 4gfi_A 296 FADLDGPLLLAEDRD--PGLVYEGSLVYPARPEL 327 (329)
T ss_dssp EECCCHHHHBSSCCS--SCCCEETTEECCCCTTT
T ss_pred eeccCcchhhhccCC--CCcEEcCeEECCCCCCC
Confidence 778999988887753 33456777889999997
No 102
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=100.00 E-value=5e-59 Score=461.65 Aligned_cols=319 Identities=24% Similarity=0.324 Sum_probs=267.1
Q ss_pred eEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhc-CCCCCCH
Q 014285 66 DVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLR-QSPPTTL 144 (427)
Q Consensus 66 ~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~-g~~~~~~ 144 (427)
+|++++++++++|++.||.++.++.+.++.++|+|+ ++|++||||+.+.+.++.+.......++.++|.+. |.+ +
T Consensus 3 ~i~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~v~-d~G~~G~GE~~~~~~~g~~~~~~~~~i~~~~~~l~~~~~---~ 78 (324)
T 1jpd_X 3 HMRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELE-EEGIKGTGECTPYPRYGESDASVMAQIMSVVPQLEKGLT---R 78 (324)
T ss_dssp SCCEEEEEEEEEEBSCC------CCSEEEEEEEEEE-ETTEEEEEEECCCGGGTCCHHHHHHHHHTTHHHHHTTCC---H
T ss_pred ceEEEEEEEEEecccccEEecCeeEEEeeEEEEEEE-eCCceEEEEeeCCCCcCCCHHHHHHHHHHHHHHHhcCCC---H
Confidence 477999999999999999999998889999999999 68999999999887654332223333455777774 543 4
Q ss_pred HHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCcee-eeeeecCCCHHHHHHHHHHHhhcCCcEE
Q 014285 145 NFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLS-TAITIPAVSPAEASELASKYCKLGFSTL 223 (427)
Q Consensus 145 ~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip-~~~~i~~~~~~~~~~~~~~~~~~Gf~~i 223 (427)
+.+++ + .+ .+++++|||+||||+.||..|+|||+||||..++.+ ..++++..+++++.+++++++++||+++
T Consensus 79 ~~~~~-~---~~---~~~a~~aid~AlwDl~~k~~g~Pl~~llGg~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~G~~~~ 151 (324)
T 1jpd_X 79 EELQK-I---LP---AGAARNALDCALWDLAARRQQQSLADLIGITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLL 151 (324)
T ss_dssp HHHHH-H---SC---SSHHHHHHHHHHHHHHHHTTTCCHHHHHTCCCCSEEEBCEEECSCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHH-h---Cc---cHHHHHHHHHHHHHHHHHHhCCcHHHHhCCCCCCCcceeEEeeCCCHHHHHHHHHHHHHcCCCEE
Confidence 44432 2 22 257899999999999999999999999999754333 2344566789999999999999999999
Q ss_pred EEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhcccc
Q 014285 224 KLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY 303 (427)
Q Consensus 224 KlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~ 303 (427)
|+|+|. ++|++++++||+..|++.|+||||++|++++|+++++.|+++++ .|||||++++|+++++++ ++
T Consensus 152 KiKvg~--~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l------~~ 221 (324)
T 1jpd_X 152 KVKLDN--HLISERMVAIRTAVPDATLIVDANESWRAEGLAARCQLLADLGV--AMLEQPLPAQDDAALENF------IH 221 (324)
T ss_dssp EEECCS--SCHHHHHHHHHHHCTTSEEEEECTTCCCSTTHHHHHHHHHHTTC--CEEECCSCTTSCGGGGSS------CC
T ss_pred EEEeCC--chHHHHHHHHHHhCCCCEEEEECcCCCCHHHHHHHHHHHHhCCC--CEEECCCCCCCHHHHHhc------cC
Confidence 999997 57899999999977999999999999999999999999999997 499999999999999877 36
Q ss_pred CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCc
Q 014285 304 GISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCI 382 (427)
Q Consensus 304 ~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~ 382 (427)
++||++||++.+..+++++++. +|++|+|++++| ++++++++++|+++|+++++|+++||+|+++|++|+++.+
T Consensus 222 ~ipIa~dE~~~~~~~~~~~~~~--~~~i~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~es~i~~aa~~~la~~~--- 296 (324)
T 1jpd_X 222 PLPICADESCHTRSNLKALKGR--YEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCMLCTSRAISAALPLVPQV--- 296 (324)
T ss_dssp SSCEEESTTCSSGGGHHHHBTT--BSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHGGGGGGC---
T ss_pred CCCEEEcCCCCCHHHHHHHHhh--CCEEEEcchhhCcHHHHHHHHHHHHHcCCcEEEeCcchHHHHHHHHHHHhhcC---
Confidence 8999999999999999999854 899999999997 9999999999999999999999999999999999998765
Q ss_pred ceeccCCCcccccCCCCCceeeeCcEEec
Q 014285 383 KYVNLNTPFLLSEDPFVGGCEVSGAIYNF 411 (427)
Q Consensus 383 ~~~e~~~p~~~~~~~~~~~~~~~~G~i~~ 411 (427)
.+.++++|+++.+|++ +++.++||++.+
T Consensus 297 ~~~~l~~~~~~~~d~~-~~~~~~~G~i~~ 324 (324)
T 1jpd_X 297 SFADLDGPTWLAVDVE-PALQFTTGELHL 324 (324)
T ss_dssp SEECCCGGGGBSSCCS-SCCEEETTEEEC
T ss_pred CccCCCchhhhhccCC-CCcEEECCEEeC
Confidence 4678888877778876 678899998864
No 103
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=100.00 E-value=9e-58 Score=470.46 Aligned_cols=347 Identities=17% Similarity=0.221 Sum_probs=281.7
Q ss_pred eeEEEEEEEEEEeeccccccccce--eEEeeeEEEEEEEEcC--CceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCC
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLS--SVENVENVAIRVELSN--GCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSP 140 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~--~~~~~~~vlV~v~t~~--G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~ 140 (427)
|||++|+++.+++|++.|+..+.+ +.+.++.++|+|+|++ |++||||+.+.+. +.+ .....++.+.|.|+|++
T Consensus 2 mkI~~i~~~~~~~p~~~p~~~~~~~~~~~~~~~~~V~v~td~~~G~~G~Ge~~~~g~-~~~--~v~~~i~~l~~~liG~d 78 (441)
T 2hxt_A 2 RTIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFTIGR-GND--VQTAAVAALAEHVVGLS 78 (441)
T ss_dssp CBEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTCEEEEEEEECST-THH--HHHHHHHTTHHHHTTCB
T ss_pred CcEEEEEEEEEEecCCCCcCcccccccCCCcceEEEEEEECCCCCCEEEEeecCCCC-CcH--HHHHHHHHHHHHHcCCC
Confidence 799999999999999999876543 2234568999999998 9999999986432 222 12223456889999999
Q ss_pred CCCHHH----HHHHHHHH----CCC---ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCC------------------
Q 014285 141 PTTLNF----ALDEIARI----LPG---SEFASVRAGVEMALIDAVANSIDIPLWRLFGGAS------------------ 191 (427)
Q Consensus 141 ~~~~~~----~~~~l~~~----~~g---~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~------------------ 191 (427)
+.+++. +|+.|... ..+ ...+++++|||+||||++||..|+|||+||||..
T Consensus 79 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~~~~A~said~AlwDl~gk~~g~Pl~~lLGG~~~~~~~~~~~~~~~~d~~~ 158 (441)
T 2hxt_A 79 VDKVIADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIAELTPEQLVDTIDFRYLSDALT 158 (441)
T ss_dssp HHHHHHCHHHHHHHHHTCHHHHHTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHHTSCHHHHHHHCCCTTCTTTCC
T ss_pred hHHHHhhHHHHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHHcCCcHHHHhcCCCcccccccccccccccccc
Confidence 887754 56666431 112 1235789999999999999999999999999853
Q ss_pred ------------------------Cceeeeeee--cC-CCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-
Q 014285 192 ------------------------NSLSTAITI--PA-VSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA- 243 (427)
Q Consensus 192 ------------------------~~ip~~~~i--~~-~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~- 243 (427)
+.+|.|.+. +. .+++++.+.+++++++||++||+|+|.+++.|++++++||+
T Consensus 159 ~~~~~~~~~~~~~~~~~r~~~~~~~~vp~y~~~~g~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v~avR~a 238 (441)
T 2hxt_A 159 RDEALAILRDAQPQRAARTATLIEQGYPAYTTSPGWLGYSDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAA 238 (441)
T ss_dssp HHHHHHHHHHHGGGHHHHHHHHHHHCEEEEEEEEECTTSCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccccchhhhhhcccCCcceeEecccccCCCHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHHHHHHHh
Confidence 257777642 22 37899999999999999999999999989999999999999
Q ss_pred hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHH
Q 014285 244 VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKV 322 (427)
Q Consensus 244 ~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~l 322 (427)
.++++.|+||+|++|++++|+++++.|+++++ .|||||++++|++++++|++ ++ ++||++||++.+..+++++
T Consensus 239 ~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i--~~iEqP~~~~d~~~~~~l~~----~~~~iPIa~dE~~~~~~~~~~~ 312 (441)
T 2hxt_A 239 IGPDIAMAVDANQRWDVGPAIDWMRQLAEFDI--AWIEEPTSPDDVLGHAAIRQ----GITPVPVSTGEHTQNRVVFKQL 312 (441)
T ss_dssp HCSSSEEEEECTTCCCHHHHHHHHHTTGGGCC--SCEECCSCTTCHHHHHHHHH----HHTTSCEEECTTCCSHHHHHHH
T ss_pred cCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC--CeeeCCCCHHHHHHHHHHHh----hCCCCCEEEeCCcCCHHHHHHH
Confidence 68999999999999999999999999999997 49999999999999999986 45 6999999999999999999
Q ss_pred HHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHH-HHHh-----hcCCc--ceeccCCCccc
Q 014285 323 MQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFAL-HLAA-----GLGCI--KYVNLNTPFLL 393 (427)
Q Consensus 323 l~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~-hlaa-----al~~~--~~~e~~~p~~~ 393 (427)
++.+++|++++|++++| ++++++++++|+++|+++++|+ +++++++++ |++. ..++. .++|+...
T Consensus 313 i~~~~~d~v~ik~~~~GGite~~~ia~~A~~~g~~~~~h~---~~~~~~~~~~~~a~~~~~~~~~~~~~~~~e~~~~--- 386 (441)
T 2hxt_A 313 LQAGAVDLIQIDAARVGGVNENLAILLLAAKFGVRVFPHA---GGVGLCELVQHLAMADFVAITGKMEDRAIEFVDH--- 386 (441)
T ss_dssp HHHTCCSEECCCTTTSSHHHHHHHHHHHHHHTTCEECCCC---CSTTHHHHHHHHHHHHHHHTTCCCTTCCEEECCS---
T ss_pred HHcCCCCEEEeCcceeCCHHHHHHHHHHHHHcCCeEEEec---ChHHHHHHHHHHHhcchhhccccccCcceeechh---
Confidence 99999999999999998 9999999999999999999885 344544433 4432 22322 23443221
Q ss_pred ccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 394 SEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 394 ~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
..+.+.+++.++||++.+|++||||+++|++.+
T Consensus 387 ~~~~~~~~~~~~~G~i~~p~~PGlGve~d~~~l 419 (441)
T 2hxt_A 387 LHQHFLDPVRIQHGRYLAPEVPGFSAEMHPASI 419 (441)
T ss_dssp SGGGBSSCCCEETTEECCCCSSBCSCCBCHHHH
T ss_pred hhhhccCCccccCCeEECCCCCCCCcccCHHHH
Confidence 123456678899999999999999999998865
No 104
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=100.00 E-value=3.4e-56 Score=453.95 Aligned_cols=307 Identities=14% Similarity=0.202 Sum_probs=258.4
Q ss_pred EeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHH-HHHhhHhcCCCCCCHHHHHHHHHHHCC---C--ChhhhHH
Q 014285 91 ENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKV-REACQFLRQSPPTTLNFALDEIARILP---G--SEFASVR 164 (427)
Q Consensus 91 ~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~l~~~~~---g--~~~~~a~ 164 (427)
+.++.++|+|+|++|++||||+.+ ++. ....+ +.+.|.|+|+++.+++.+|+.|.+... + ...++++
T Consensus 67 ~~~~~v~V~v~td~G~~G~GE~~~-----g~~--~~~~v~~~l~p~LiG~d~~~~~~i~~~m~~~~~~~~g~~~~~~~A~ 139 (415)
T 2p3z_A 67 NVLGTLIVEVEAENRQTGFAVSTA-----GEM--GCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTI 139 (415)
T ss_dssp TSSCEEEEEEEETTSCEEEEEEEC-----HHH--HHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHTTTSTTSSHHHHHH
T ss_pred ccceEEEEEEEECCCCEEEEEecC-----CHH--HHHHHHHHHHHHHCCCChhhHHHHHHHHHHhhhcccCCCcchHHHH
Confidence 367899999999999999999963 221 11223 348899999999999999999976421 2 2346899
Q ss_pred HHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccC-------CchhhHH
Q 014285 165 AGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGR-------NITADFD 236 (427)
Q Consensus 165 ~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-------~~~~d~~ 236 (427)
+||||||||++||..|+|||+||||. ++++|+|.+. .++++ .+++||+++|+|+|. ++++|++
T Consensus 140 said~ALwDl~ak~~g~Pl~~lLGG~~~~~vp~y~~g--~~~~~-------~~~~G~~~~KiK~g~g~~~G~~~~~~d~~ 210 (415)
T 2p3z_A 140 SCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATG--ARPDL-------AKEMGFIGGKMPTHWGPHDGDAGIRKDAA 210 (415)
T ss_dssp HHHHHHHHHHHHHHHTCBHHHHTTCCSSSEEEEEEES--SCHHH-------HHHHTCSEEEEECCCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHcCCCCCCceeeeecC--CCHHH-------HHHhCcceEEEecccCcccccccHHHHHH
Confidence 99999999999999999999999996 7789998763 24532 246799999999963 4578999
Q ss_pred HHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC--CeEEecCCC
Q 014285 237 VLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG--ISVVADESC 313 (427)
Q Consensus 237 ~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~--iPIa~dE~~ 313 (427)
++++||+ .++++.|+||||++|++++|+++++.|+++++ .|||||++++|++++++|++ +++ +||++||++
T Consensus 211 ~v~avrea~G~~~~L~vDaN~~~~~~~Ai~~~~~l~~~~i--~~iEqPl~~~d~~~~~~l~~----~~~~~ipIa~dE~~ 284 (415)
T 2p3z_A 211 MVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNL--KWIEECLPPQQYEGYRELKR----NAPAGMMVTSGEHH 284 (415)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTC--CEEECCSCTTCHHHHHHHHH----HSCTTCEEEECTTC
T ss_pred HHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCC--ceEeCCCCcchHHHHHHHHH----hcCCCCcEEcCCCC
Confidence 9999999 58999999999999999999999999999987 49999999999999999986 466 999999999
Q ss_pred CCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcceeccCCC--
Q 014285 314 RSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIKYVNLNTP-- 390 (427)
Q Consensus 314 ~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~~~e~~~p-- 390 (427)
.+..+++++++.+ +|++|+|++++| ++++++++++|+++|+++++|+. + .+++|++++++|+.+.|+...
T Consensus 285 ~~~~~~~~~i~~~-~d~i~ik~~~~GGitea~~ia~lA~~~gi~v~~h~~---~---~a~~hlaaa~p~~~~~e~~~~~~ 357 (415)
T 2p3z_A 285 GTLQSFRTLAETG-IDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGS---S---VYSHHAVITFTNTPFSEFLMTSP 357 (415)
T ss_dssp CSHHHHHHHHHTT-CSEECCCHHHHTCHHHHHHHHHHHHHTTCCBCCCCC---H---HHHHHHHTTCTTCCCEEEECCST
T ss_pred CCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCh---H---HHHHHHHHhCCCCcccccccccc
Confidence 9999999999999 999999999997 99999999999999999999874 1 368999999999888775321
Q ss_pred -----cccccCCCCCceeeeCcEEecC--CCCCcccccCCCcC
Q 014285 391 -----FLLSEDPFVGGCEVSGAIYNFT--NARGQGGFLKWTIV 426 (427)
Q Consensus 391 -----~~~~~~~~~~~~~~~~G~i~~p--~~pGlGve~d~~~v 426 (427)
..+..+.+..++.++||++.+| ++||||+++|++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~G~l~~p~P~~PGLGveld~~~~ 400 (415)
T 2p3z_A 358 DCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRDCH 400 (415)
T ss_dssp TSSSCCCTTTTTEETCCCCBTTEEEGGGGCSSBTSCEECTTSC
T ss_pred ccccccchhhhhccCCCeeECCEEECCCCCCCCcceeECHHHH
Confidence 1122334434455789999998 99999999999874
No 105
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=100.00 E-value=3.6e-55 Score=433.57 Aligned_cols=298 Identities=20% Similarity=0.216 Sum_probs=259.0
Q ss_pred eEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHH-HHHHHHH-HhhHhcCCCCCC
Q 014285 66 DVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTK-ALVKVRE-ACQFLRQSPPTT 143 (427)
Q Consensus 66 ~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~-~~~~~~~-~~~~l~g~~~~~ 143 (427)
+|++++++++++|+++||.++.++++.++.++|+|+|+ |++||||+.+.++|+++..+ ....+++ +.+.+.|+ .+
T Consensus 2 ~I~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~V~i~td-G~~G~GE~~~~~~~~~e~~~~~~~~l~~~~~~~l~g~--~~ 78 (322)
T 1r6w_A 2 HMRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREG-EREGWGEISPLPGFSQETWEEAQSVLLAWVNNWLAGD--CE 78 (322)
T ss_dssp CCEEEEEEEEEEEBCTTCBC-CCBCCEEEEEEEEEEET-TEEEEEEECCCTTTCSSCHHHHHHHHHHHHHHHTTSC--CC
T ss_pred cceEEEEEEEEEeccCCeEeccEEEEeeeEEEEEEEEC-CeEEEEEecCCCCCCccCHHHHHHHHHHHHHHhhCCh--hh
Confidence 58899999999999999999999999999999999996 99999999998877765433 3333443 67888887 22
Q ss_pred HHHHHHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcEE
Q 014285 144 LNFALDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTL 223 (427)
Q Consensus 144 ~~~~~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~i 223 (427)
+ .+ .+++++||||||||++||..|+|+| +.+|+| ..+++++.++++++ +||+++
T Consensus 79 l-----------~~--~~~a~~aid~ALwDl~gk~~g~p~~-------~~v~~~----~~~~~~~~~~a~~~--~G~~~~ 132 (322)
T 1r6w_A 79 L-----------PQ--MPSVAFGVSCALAELTDTLPQAANY-------RAAPLC----NGDPDDLILKLADM--PGEKVA 132 (322)
T ss_dssp C-----------CS--SHHHHHHHHHHHHHHTTCSCCCSCC-------CCCCEE----CSCHHHHHHHHHTC--CSSEEE
T ss_pred c-----------cc--ChHHHHHHHHHHHHhcCCCCCCCcc-------ceEEEe----CCCHHHHHHHHHHh--CCCceE
Confidence 1 22 4689999999999999999999886 346665 45788887777664 799999
Q ss_pred EEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhC---CCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 224 KLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDM---GVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 224 KlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~---~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
|+|+|. ++++|++++++||+..|++.||||||++|++++|+++++.|+++ ++ .|||||++ +++++++|++
T Consensus 133 KiKvG~~~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~i--~~iEqP~~--~~~~~~~l~~-- 206 (322)
T 1r6w_A 133 KVRVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRDRI--AFLEEPCK--TRDDSRAFAR-- 206 (322)
T ss_dssp EEECSSSCHHHHHHHHHHHHHHCTTEEEEEECTTCBCHHHHHHHHHTSCTTTGGGE--EEEECCBS--SHHHHHHHHH--
T ss_pred EEEeCCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhhccCCe--eEEECCCC--ChHHHHHHHH--
Confidence 999997 88999999999999778999999999999999999999999998 76 59999997 4889999986
Q ss_pred ccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhh
Q 014285 300 RDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAG 378 (427)
Q Consensus 300 r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaa 378 (427)
++++||++||++.+ .++ ++++.+++|++|+|++++| ++++++++++|+++|+++++|+++||+||+++++|++++
T Consensus 207 --~~~ipIa~dE~~~~-~~~-~~~~~~a~d~i~ik~~~~GGit~~~~ia~~A~~~gi~~~~~~~~es~ig~aa~~hlaa~ 282 (322)
T 1r6w_A 207 --ETGIAIAWDESLRE-PDF-AFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAW 282 (322)
T ss_dssp --HHCCCEEESGGGGS-TTC-CCCCCTTEEEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEBCSSCCHHHHHHHHHHHHH
T ss_pred --hCCCCEEeCCCCCC-hhH-hhhhcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCcEEEECccccHHHHHHHHHHHHh
Confidence 68999999999999 456 6668889999999999997 999999999999999999999999999999999999999
Q ss_pred cCCcceeccCCCcccccCCCCCce
Q 014285 379 LGCIKYVNLNTPFLLSEDPFVGGC 402 (427)
Q Consensus 379 l~~~~~~e~~~p~~~~~~~~~~~~ 402 (427)
+++..+.+++++.++.+|++.+++
T Consensus 283 ~~~~~~~~l~t~~~~~~d~~~~~~ 306 (322)
T 1r6w_A 283 LTPDTIPGLDTLDLMQAQQVRRWP 306 (322)
T ss_dssp HCTTSCCBCTTGGGBSCEESSCCT
T ss_pred cCCCCccCCCchhhhhhccccCCc
Confidence 988888899998888888776655
No 106
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=100.00 E-value=4.2e-55 Score=446.47 Aligned_cols=307 Identities=17% Similarity=0.185 Sum_probs=258.6
Q ss_pred eeEEeeeEEEEEEEEcCCceEEEEeecC---------CCCCcchHHHHHHHHH-HhhHhcCCCCCCHHHHHHHHHHHCC-
Q 014285 88 SSVENVENVAIRVELSNGCVGWGEVAVV---------PLVTGDQTKALVKVRE-ACQFLRQSPPTTLNFALDEIARILP- 156 (427)
Q Consensus 88 ~~~~~~~~vlV~v~t~~G~~G~GE~~~~---------~~~s~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~l~~~~~- 156 (427)
++.+.++.++|+|+|++|++|||||.+. |.|+++ .....+++ +.|.|+|+++.+++.+|+.|.....
T Consensus 45 ~~~~~~~~v~V~v~td~G~~G~GE~~~~~~sGa~~r~~~~~~~--~~~~~i~~~l~p~LiG~d~~~~~~i~~~l~~~~~~ 122 (413)
T 1kko_A 45 SVRQAGECVSVQLILENGAVAVGDCAAVQYSGAGGRDPLFLAE--HFIPFLNDHIKPLLEGRDVDAFLPNARFFDKLRID 122 (413)
T ss_dssp SSEEEEEEEEEEEEETTSCEEEEEECCCTTTTSTTCCCCCCHH--HHHHHHHHHTHHHHTTCBCSCSHHHHHHHHHCEET
T ss_pred eEEEecceEEEEEEECCCCEEEEEecccccccccccCccccHH--HHHHHHHHHHHHHHcCCChHhHHHHHHHHHhhhcc
Confidence 4567789999999999999999999876 444442 22333444 8899999999999999999976421
Q ss_pred CC-hhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC------CCceeeeeeecC---CCHHHHHHHHHHHhhcC-CcEEEE
Q 014285 157 GS-EFASVRAGVEMALIDAVANSIDIPLWRLFGGA------SNSLSTAITIPA---VSPAEASELASKYCKLG-FSTLKL 225 (427)
Q Consensus 157 g~-~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~------~~~ip~~~~i~~---~~~~~~~~~~~~~~~~G-f~~iKl 225 (427)
+. ..+++++||||||||+.||..|+|||+||||. +++||+|.+.+. .+++++.+++++++++| |++||+
T Consensus 123 ~~~~~~~A~~aid~AlwDl~ak~~g~Pl~~lLGg~~~~~l~~~~vp~y~~~g~~~~~~~~~~~~~~~~~~~~G~~~~iK~ 202 (413)
T 1kko_A 123 GNLLHTAVRYGLSQALLDATALASGRLKTEVVCDEWQLPCVPEAIPLFGQSGDDRYIAVDKMILKGVDVLPHALINNVEE 202 (413)
T ss_dssp TEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHTTCCCCCCCCCEECCCTTCTTHHHHHHHHTTCSEEEETTCCCCCC
T ss_pred cCccHHHHHHHHHHHHHHHHHHHcCCcHHHHhCCccccccccCCeEEEEecCccccCCHHHHHHHHHHHHhCCCccEEEE
Confidence 21 23689999999999999999999999999984 568898876332 36777877777888899 999999
Q ss_pred eccCCchhh-------HHHHHHHHH-hCCCcEEEEeCCC------CCCHHHHHHHHHHhhhCCCCCc-eEeCCCC----C
Q 014285 226 NVGRNITAD-------FDVLQAIHA-VHPHCSFILDANE------GYTSEEAVEVLGKLNDMGVIPV-LFEQPVH----R 286 (427)
Q Consensus 226 KiG~~~~~d-------~~~l~~ir~-~~~~~~L~vDAN~------~~s~~~A~~~l~~L~~~~l~~~-~iEqP~~----~ 286 (427)
|+|.+.++| ++++++||+ .++++.|+||||+ +|++++|++++++|+++++.+. |||||++ +
T Consensus 203 KvG~~~~~~~~~l~~d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~~~A~~~~~~L~~~~~~~~l~iEqP~~~~~~~ 282 (413)
T 1kko_A 203 KLGFKGEKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKP 282 (413)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSCEEEECCCCCSSHH
T ss_pred ecCCChhhHHHHHHHHHHHHHHHHHhhCCCCeEEEECCCccccccCCCHHHHHHHHHHHHhccCCcceEEECCcCCCCCc
Confidence 999865554 489999998 5789999999999 9999999999999999654322 9999999 6
Q ss_pred CChhhHHHHHHhhcc-ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-
Q 014285 287 DDWSGLHDVSNFARD-TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI- 363 (427)
Q Consensus 287 ~d~~~~~~L~~~~r~-~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~- 363 (427)
+|+++|++|++.+.+ .+++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|+++|+++++|++.
T Consensus 283 ~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~~A~~~gi~~~~~~~~~ 362 (413)
T 1kko_A 283 DQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCN 362 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTT
T ss_pred ccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEecCCCC
Confidence 799999999862100 07899999999999999999999999999999999997 999999999999999999999996
Q ss_pred chhHHHHHHHHHHhhcCCcceeccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCC
Q 014285 364 ETRLATGFALHLAAGLGCIKYVNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKW 423 (427)
Q Consensus 364 es~ig~~a~~hlaaal~~~~~~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~ 423 (427)
||++++++++|+++++++ ..+|++||+|++.++
T Consensus 363 et~i~~aa~~hlaaa~~~---------------------------~~ip~kpG~g~~~~~ 395 (413)
T 1kko_A 363 ETEISARTCVHVALAARP---------------------------MRMLIKPGMGFDEGL 395 (413)
T ss_dssp SCHHHHHHHHHHHHHHCC---------------------------SEEECCSCSSSHHHH
T ss_pred CCHHHHHHHHHHHHcCCC---------------------------CcccCCCCCCCCccH
Confidence 999999999999998742 346788999998764
No 107
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=100.00 E-value=4.4e-54 Score=439.38 Aligned_cols=302 Identities=16% Similarity=0.227 Sum_probs=259.9
Q ss_pred cccccccceeE-EeeeEEEEEEEEcCCceEEEEeecCCC--CCc----ch-HHHHHHHHH-HhhHhcCCCCCCHHHHHHH
Q 014285 80 SAPLSLGLSSV-ENVENVAIRVELSNGCVGWGEVAVVPL--VTG----DQ-TKALVKVRE-ACQFLRQSPPTTLNFALDE 150 (427)
Q Consensus 80 ~~p~~~a~~~~-~~~~~vlV~v~t~~G~~G~GE~~~~~~--~s~----~~-~~~~~~~~~-~~~~l~g~~~~~~~~~~~~ 150 (427)
..||+++.+++ +.++.++|+|+|++|++|||||.+.+. +++ +. ......+++ ++|.|+|+++.+++.+|+.
T Consensus 36 ~~P~~~~~~~~~~~~~~v~V~v~td~G~~G~GE~~~~~~~g~g~~e~~~~~~~~~~~i~~~l~p~L~G~d~~~~~~i~~~ 115 (413)
T 1kcz_A 36 GSTVTEGFTQVRQKGESISVLLVLEDGQVAHGDCAAVQYSGAGGRDPLFLAKDFIPVIEKEIAPKLIGREITNFKPMAEE 115 (413)
T ss_dssp SCCCSTTCSSSEEECCEEEEEEEETTSCEEEEEECCCTTTTSTTSCSCCCHHHHHHHHHHHTHHHHTTCBCCCHHHHHHH
T ss_pred CCCEEcccceEeecCcEEEEEEEECCCCEEEEEEccccccccCcccccccHHHHHHHHHHHHHHHHcCCChhhHHHHHHH
Confidence 57999998887 889999999999999999999997653 221 11 123344554 8999999999999999999
Q ss_pred HHHHC-CC-ChhhhHHHHHHHHHHHHHHhhCCCChhhhhCC------CCCceeeeeeecC---CCHHHHHHHHHHHhhcC
Q 014285 151 IARIL-PG-SEFASVRAGVEMALIDAVANSIDIPLWRLFGG------ASNSLSTAITIPA---VSPAEASELASKYCKLG 219 (427)
Q Consensus 151 l~~~~-~g-~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg------~~~~ip~~~~i~~---~~~~~~~~~~~~~~~~G 219 (427)
|.... .| ...+++++||||||||+.||..|+|||+|||| .++++|+|.+.+. .+++++.+++++++++|
T Consensus 116 l~~~~~~g~~~~~~a~~aid~AlwDl~ak~~g~Pl~~lLGg~~~~~~~~~~vp~~~~~g~~~~~~~~~~~~~a~~~~~~G 195 (413)
T 1kcz_A 116 FDKMTVNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIRDEYNPGAEINAVPVFAQSGDDRYDNVDKMIIKEADVLPHA 195 (413)
T ss_dssp HHHCEETTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHSTTCCCCCCCEECCCTTCTTHHHHHHHHTTCSEEEEC
T ss_pred HHhcccCCcchHHHHHHHHHHHHHHHHHHHhCCcHHHHhcccccCcCccCCeeeeEecCccccCCHHHHHHHHHHHHHhc
Confidence 95432 22 12468999999999999999999999999997 4678999886542 35778888888888899
Q ss_pred -CcEEEEeccCC---chh----hHHHHHHHHH-hCCCcEEEEeCCCC------CCHHHHHHHHHHhhhC--CCCCceEeC
Q 014285 220 -FSTLKLNVGRN---ITA----DFDVLQAIHA-VHPHCSFILDANEG------YTSEEAVEVLGKLNDM--GVIPVLFEQ 282 (427)
Q Consensus 220 -f~~iKlKiG~~---~~~----d~~~l~~ir~-~~~~~~L~vDAN~~------~s~~~A~~~l~~L~~~--~l~~~~iEq 282 (427)
|+++|+|+|.+ ..+ |++++++||+ .++++.|+||||++ |++++|+++++.|+++ ++. .||||
T Consensus 196 ~~~~~KiKvG~~~~~~~~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~~~~~~~a~~~~~~L~~~~~~i~-~~iEq 274 (413)
T 1kcz_A 196 LINNVEEKLGLKGEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVDIKAMADYIQTLAEAAKPFH-LRIEG 274 (413)
T ss_dssp CCCCCCCCCCTTSHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHHHHHHTTSC-EEEEC
T ss_pred chhheeeccCCCccchhhHHHHHHHHHHHHHHhcCCCceEEEecCCCcccccCCCHHHHHHHHHHHHhhcCCcc-eEEec
Confidence 99999999975 344 8999999998 57899999999999 9999999999999998 552 49999
Q ss_pred CCCC----CChhhHHHHHHhhccc-----cCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHH
Q 014285 283 PVHR----DDWSGLHDVSNFARDT-----YGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRK 352 (427)
Q Consensus 283 P~~~----~d~~~~~~L~~~~r~~-----~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~ 352 (427)
|++. +|+++|++|++ + +++||++||++.+..+++++++.+++|++|+|++++| ++++++++++|++
T Consensus 275 P~~~~~~~~d~~~~~~l~~----~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~ 350 (413)
T 1kcz_A 275 PMDVEDRQKQMEAMRDLRA----ELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKA 350 (413)
T ss_dssp SBCCSSHHHHHHHHHHHHH----HHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHH
T ss_pred CCCCCCCcccHHHHHHHHH----hhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 9965 48999999986 5 7899999999999999999999999999999999997 9999999999999
Q ss_pred cCCcEEEcc-cCchhHHHHHHHHHHhhcCCcceec
Q 014285 353 SGLHLMIDG-MIETRLATGFALHLAAGLGCIKYVN 386 (427)
Q Consensus 353 ~gi~~~~~s-~~es~ig~~a~~hlaaal~~~~~~e 386 (427)
+|+++++|+ ++||+++.+|++|++++++++.+.+
T Consensus 351 ~gi~~~~~~~~~es~i~~~a~~hlaaa~~~~~i~~ 385 (413)
T 1kcz_A 351 NGMGAYCGGTCNETNRSAEVTTNIGMACGARQVLA 385 (413)
T ss_dssp TTCEEEECCCTTSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred cCCEEEecCCCCCCHHHHHHHHHHHhcCCCCceee
Confidence 999999988 7899999999999999998876544
No 108
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=100.00 E-value=1e-52 Score=417.55 Aligned_cols=288 Identities=22% Similarity=0.265 Sum_probs=242.2
Q ss_pred EEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHH-HHHHHHHhhHhcCCCCCCHHHH
Q 014285 69 RAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKA-LVKVREACQFLRQSPPTTLNFA 147 (427)
Q Consensus 69 ~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~-~~~~~~~~~~l~g~~~~~~~~~ 147 (427)
+++++++++|++.||.++.++++.++.++|+|+|++|++||||+.+.+.++.++.+. +..++.+.+.+ ++.+++.+
T Consensus 4 ~i~~~~~~~pl~~p~~~s~~~~~~~~~~lV~v~td~G~~G~GE~~~~~~~~~e~~~~~~~~~~~l~~~l---~~~~~~~~ 80 (332)
T 2ozt_A 4 RWQWRIYEEPLQEPLTTAQGVWRSRSGIYLRLEDEQGQVGYGEIAPLPGWGSETLNADIALCQQLPGHL---TPEIMATI 80 (332)
T ss_dssp EEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTSCEEEEEECCCTTSSSCCHHHHHHHHHHSCSEE---CHHHHTTS
T ss_pred EEEEEEEEeecCCCcEecCEEEEeeeEEEEEEEECCCCEEEEEecCCCCCCcccHHHHHHHHHHhhccC---CHHHHHHH
Confidence 688999999999999999999999999999999999999999999887777644332 22222333333 33323322
Q ss_pred HHHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEec
Q 014285 148 LDEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNV 227 (427)
Q Consensus 148 ~~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKi 227 (427)
|+ .++++++|||+||| +.|| +|+..++ +.|... +.+++++.+.+++++++||+++|+|+
T Consensus 81 ~~---------~~~~a~~aid~Al~-l~gk---------lgg~~~~-~~y~~~-~~~~e~~~~~a~~~~~~G~~~~KiKv 139 (332)
T 2ozt_A 81 PE---------ALPAAQFGFATAWQ-SVGR---------LPYRVRP-WPICAL-LGSGQAALEQWQQSWQRGQTTFKWKV 139 (332)
T ss_dssp CT---------TCHHHHHHHHHHHH-HTTT---------CSCCCCC-CCBCEE-ECTGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HH---------HhHHHHHHHHHHHH-Hhcc---------cCCCCCC-cceEEe-cCChHHHHHHHHHHHHcCCcEEEEEe
Confidence 22 22568999999999 8887 3554324 555432 35788899999999999999999999
Q ss_pred cC-CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhC---CCCCceEeCCCCCCChhhHHHHHHhhccc
Q 014285 228 GR-NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDM---GVIPVLFEQPVHRDDWSGLHDVSNFARDT 302 (427)
Q Consensus 228 G~-~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~---~l~~~~iEqP~~~~d~~~~~~L~~~~r~~ 302 (427)
|. ++++|++++++||+. ++++.|+||||++|++++|+++++.|+++ ++ .|||||++++|++++++|++ +
T Consensus 140 g~~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~~~i--~~iEqP~~~~d~~~~~~l~~----~ 213 (332)
T 2ozt_A 140 GVMSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANRWFAWLDRHGNGKI--EYVEQPLPPDQWQALLSLAQ----T 213 (332)
T ss_dssp SSSCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHHHHHCCTTE--EEEECCSCTTCHHHHHHHHH----H
T ss_pred CCCChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHHHHHHHHHhhccCCc--ceeECCCCCCCHHHHHHHHH----h
Confidence 97 589999999999995 78999999999999999999999999998 76 59999999999999999986 6
Q ss_pred cCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHc--CCcEEEcccCchhHHHHHHHHHHhhc
Q 014285 303 YGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKS--GLHLMIDGMIETRLATGFALHLAAGL 379 (427)
Q Consensus 303 ~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~--gi~~~~~s~~es~ig~~a~~hlaaal 379 (427)
+++||++||++.+..+++++++.++++++++|++++| ++ +++++|+++ |+++++|+++||+|++++++|+++++
T Consensus 214 ~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik~~~~GGi~---~i~~~A~~~~~gi~~~~~~~~es~i~~aa~~hlaa~~ 290 (332)
T 2ozt_A 214 VTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTALFGDPD---SLSLLLRRGLEPQRLVFSSALEGAIARTAIFHLLETW 290 (332)
T ss_dssp CSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHSCHH---HHHHHHHTTCCGGGEEEBCCSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEChhhhCCHH---HHHHHHHHhCCCCcEEEeCCcchHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999999999997 87 678899999 99999999999999999999999998
Q ss_pred CCcceeccCC
Q 014285 380 GCIKYVNLNT 389 (427)
Q Consensus 380 ~~~~~~e~~~ 389 (427)
+|.....+++
T Consensus 291 ~~~~~~gl~t 300 (332)
T 2ozt_A 291 QPCHALGFGV 300 (332)
T ss_dssp CCCSCBBCCC
T ss_pred CCCcCCcCCc
Confidence 8754445554
No 109
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=100.00 E-value=3.6e-50 Score=398.04 Aligned_cols=282 Identities=23% Similarity=0.333 Sum_probs=227.5
Q ss_pred EEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcchHHHHHHHHHHhhHhcCCCCCCHHHHH
Q 014285 69 RAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGDQTKALVKVREACQFLRQSPPTTLNFAL 148 (427)
Q Consensus 69 ~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 148 (427)
+++++.+++||+.||+ .++.++.++|+ |.+|||||+|++.|+.+ .. +
T Consensus 2 ~i~~~~~~~Pl~~pf~----~~~~r~~~lV~-----G~~G~GE~~p~~~~~~~-----~~-------------------~ 48 (327)
T 2opj_A 2 SLTGRAFAIPLRTRFR----GITVREGMLVR-----GAAGWGEFSPFAEYGPR-----EC-------------------A 48 (327)
T ss_dssp CCSEEEEEEEEEEEET----TEEEEEEEEEE-----CSSCEEEECCCTTCCHH-----HH-------------------H
T ss_pred EEEEEEEEEeeccCce----eeeEEEEEEEE-----cCEEEEEecCCCCCCHH-----HH-------------------H
Confidence 4678899999999997 34668888884 99999999998765421 00 0
Q ss_pred HHHHHHCCCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCCCceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEecc
Q 014285 149 DEIARILPGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGASNSLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVG 228 (427)
Q Consensus 149 ~~l~~~~~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~~~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG 228 (427)
+.+++|||||||| +| |+.++++|+|.+++..+++++.+.++ ++||++||+|+|
T Consensus 49 ------------~~~~aaid~Al~~-------~P-----g~~r~~v~~~~ti~~~~~e~~~~~~~---~~G~~~~KiKvg 101 (327)
T 2opj_A 49 ------------RWWAACYEAAELG-------WP-----APVRDTVPVNATVPAVGPEEAARIVA---SSGCTTAKVKVA 101 (327)
T ss_dssp ------------HHHHHHHHHHHTC-------CC-----CCSCSEEEBCEEECSCCHHHHHHHHH---HHCCSEEEEECC
T ss_pred ------------HHHHHHHHHHHhC-------CC-----cCCCCeeEEeEEeCCCCHHHHHHHHH---HCCCCEEEEEeC
Confidence 1358999999974 46 56688999999999889988765543 589999999998
Q ss_pred C---CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC
Q 014285 229 R---NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG 304 (427)
Q Consensus 229 ~---~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~ 304 (427)
. ++++|++++++||+ .+|++.||||||++|++++|+++++.|+++++ .|||||++ +++++++|++ +++
T Consensus 102 ~~g~~~~~d~~~v~avR~~~G~~~~L~vDaN~~w~~~~A~~~~~~L~~~~l--~~iEqP~~--~~~~~~~l~~----~~~ 173 (327)
T 2opj_A 102 ERGQSEANDVARVEAVRDALGPRGRVRIDVNGAWDVDTAVRMIRLLDRFEL--EYVEQPCA--TVDELAEVRR----RVS 173 (327)
T ss_dssp C------CHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCE--EEEECCSS--SHHHHHHHHH----HCS
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhcCC--cEEeCCCC--CHHHHHHHHh----hCC
Confidence 5 57899999999999 57999999999999999999999999999987 59999997 5899999986 689
Q ss_pred CeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCCcc
Q 014285 305 ISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGCIK 383 (427)
Q Consensus 305 iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~~~ 383 (427)
+|||+||++.+..+++++++.+++|++|+|++++| ++++++++ +.+|+++++||++||+||++|++|++++++++.
T Consensus 174 iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~ia---~~~gi~~~~~~~~es~ig~aa~~hlaaa~~~~~ 250 (327)
T 2opj_A 174 VPIAADESIRRAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLA---EECGLPVVVSSAVETSVGLAAGVALAAALPELP 250 (327)
T ss_dssp SCEEC-----------CTTTTTCCSBEEECHHHHTSHHHHHHHH---HHTCSCEEEBCCSCCHHHHHHHHHHHHHSSCCS
T ss_pred CCEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHH---HHcCCcEEEcCCCcCHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999997 99999875 456999999999999999999999999999865
Q ss_pred e-eccCCCcccccCCCCCceeeeCcEEecCCCCCcccccCCCcC
Q 014285 384 Y-VNLNTPFLLSEDPFVGGCEVSGAIYNFTNARGQGGFLKWTIV 426 (427)
Q Consensus 384 ~-~e~~~p~~~~~~~~~~~~~~~~G~i~~p~~pGlGve~d~~~v 426 (427)
+ .++.....+.++++.+++.++||++.+| |+++|+++|
T Consensus 251 ~~~~l~~~~~~~~d~~~~~~~~~~G~l~vp-----gve~d~~~l 289 (327)
T 2opj_A 251 YACGLATLRLLHADVCDDPLLPVHGVLPVR-----RVDVSEQRL 289 (327)
T ss_dssp SCBBCCGGGGBSCCSBSSCCCCBTTEEECC-----CCCBCHHHH
T ss_pred cccccCchhhhhhhcccCCCeeECCEEECC-----CcccCHHHH
Confidence 4 3554333456788778888999999997 689998765
No 110
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.3e-48 Score=400.44 Aligned_cols=300 Identities=19% Similarity=0.233 Sum_probs=248.2
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC---------------CCCcc-hHHHHHH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP---------------LVTGD-QTKALVK 128 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~---------------~~s~~-~~~~~~~ 128 (427)
|+|++|+++.+..|. + ++.++|+|+|++|++|||++.... .|.++ .......
T Consensus 9 MkI~~i~~~~v~~s~--------g----~~~v~V~v~td~G~~G~G~~~~~~~tg~~ea~~~~d~~~~~~g~~~~~~~~~ 76 (427)
T 2pa6_A 9 FEIKDIVAREVIDSR--------G----NPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEKRFGGKGVLMAVEN 76 (427)
T ss_dssp GBEEEEEEEEEECTT--------S----CEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSSGGGGTCCHHHHHH
T ss_pred CEEEEEEEEEEEcCC--------C----CceEEEEEEECCCCeeeEecccccccCcceeEeecCCccccccccHHHHHHH
Confidence 999999999887542 1 567999999999999999763210 12222 2233444
Q ss_pred HHH-HhhHhcCCCCCCHHHHHHHHHHHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeee--e
Q 014285 129 VRE-ACQFLRQSPPTTLNFALDEIARIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAIT--I 200 (427)
Q Consensus 129 ~~~-~~~~l~g~~~~~~~~~~~~l~~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~--i 200 (427)
+++ +.|.|+|+++.+++.+|+.|.+.. .+...+++++||||||||+.||..|+|||+||||. ++++|+|.. +
T Consensus 77 i~~~l~p~LiG~d~~~~~~i~~~l~~~~~~~~~~~~~~~A~~avd~AlwDl~ak~~g~Pl~~lLGg~~~~~vp~~~~~~~ 156 (427)
T 2pa6_A 77 VNSIIRPEILGYDARMQREIDTIMIELDGTPNKSRLGANAILAVSLAVAKAAAATAKIPLYKYLGGFNSYVMPVPMMNVI 156 (427)
T ss_dssp HHHTHHHHHTTCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHCSCCCEECEECEEEE
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhCCCccccchHHHHHHHHHHHHHHHHHHhCCcHHHHhcCccccccccchhccc
Confidence 554 889999999999999999997631 12223579999999999999999999999999997 678888752 1
Q ss_pred ----------cC------CCHHHHHHHHHHHhhcCCcEEEE----eccC-------------CchhhHHHHHHHHH-h--
Q 014285 201 ----------PA------VSPAEASELASKYCKLGFSTLKL----NVGR-------------NITADFDVLQAIHA-V-- 244 (427)
Q Consensus 201 ----------~~------~~~~~~~~~~~~~~~~Gf~~iKl----KiG~-------------~~~~d~~~l~~ir~-~-- 244 (427)
++ .+.+++.+++.++.++||+++|+ |+|. +++.|++++++||+ +
T Consensus 157 ~gg~~~~~~l~~~~~~~~p~~~~~~~~a~~~~~~g~~~lK~~l~~K~G~~~~~vg~~gg~~~~~~~d~~~v~~vreav~~ 236 (427)
T 2pa6_A 157 NGGKHAGNDLDLQEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKK 236 (427)
T ss_dssp ECSTTTSSSCSSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHH
T ss_pred cccccccCCcCHHHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCcCCcCCCccchHHHHHHHHHHHHH
Confidence 11 12256677888888999999998 7452 36789999999998 5
Q ss_pred -CC--CcEEEEeC-------CCCC-------CHHHHHHHHH-HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCe
Q 014285 245 -HP--HCSFILDA-------NEGY-------TSEEAVEVLG-KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGIS 306 (427)
Q Consensus 245 -~~--~~~L~vDA-------N~~~-------s~~~A~~~l~-~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iP 306 (427)
++ ++.|+||| |++| ++++|++++. .|++|++ .|||||++++|++++++|++ ++++|
T Consensus 237 ~G~~~~~~L~vDa~as~~~~n~~~~~~n~~~~~~~ai~~~~~~l~~~~i--~~iEeP~~~~d~~~~~~l~~----~~~ip 310 (427)
T 2pa6_A 237 AGYEDEVVFALDAAASEFYKDGYYYVEGKKLTREELLDYYKALVDEYPI--VSIEDPFHEEDFEGFAMITK----ELDIQ 310 (427)
T ss_dssp HTCTTTCEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCE--EEEECCSCTTCHHHHHHHHH----HSSSE
T ss_pred hCCCCCcEEEEEcchhccccCCceeecCCCCCHHHHHHHHHHHHhhCCC--cEEEcCCChhhHHHHHHHHh----hCCCe
Confidence 77 89999999 6775 8999999975 8999986 59999999999999999986 68999
Q ss_pred EEecCC-CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCCc
Q 014285 307 VVADES-CRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCI 382 (427)
Q Consensus 307 Ia~dE~-~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~~ 382 (427)
|++||+ +.+..+++++++.+++|++|+|++++| ++++++++++|+++|++++++++. ||+++.+|++|++++.++.
T Consensus 311 Ia~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~~~~~h~~~es~i~~aa~l~~a~~~~~~ 389 (427)
T 2pa6_A 311 IVGDDLFVTNVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRSGETEDTTIADLSVALNSGQI 389 (427)
T ss_dssp EEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCSSCCSCCHHHHHHHHTTCSEE
T ss_pred EEeCccccCCHHHHHHHHHhCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCChHHHHHHHHHHhCCCcc
Confidence 999999 556999999999999999999999997 999999999999999999996655 9999999999999988765
No 111
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=9.6e-49 Score=401.60 Aligned_cols=298 Identities=22% Similarity=0.274 Sum_probs=249.3
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCCCcc------------------hHHHH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLVTGD------------------QTKAL 126 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~s~~------------------~~~~~ 126 (427)
|+|++|+.+.+-- +. .++.++|+|+|++|++| ||+.|.+..+++ .....
T Consensus 1 ~~I~~v~~~~v~~--------sr----g~~~v~V~v~td~G~~G-ge~~p~~~~~G~~ea~e~rd~~~~~y~g~~~~~~~ 67 (431)
T 2fym_A 1 SKIVKIIGREIID--------SR----GNPTVEAEVHLEGGFVG-MAAAPSGASTGSREALELRDGDKSRFLGKGVTKAV 67 (431)
T ss_dssp CBEEEEEEEEEEC--------TT----SCEEEEEEEEETTSCEE-EEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHH
T ss_pred CeeEEEEEEEEEc--------CC----CCeeEEEEEEECCCCcc-ceecCcccccCcccceeccCCcccccccccHHHHH
Confidence 6899999887531 11 23579999999999999 999876432221 22344
Q ss_pred HHHHH-HhhHhcCCCCCCHHHHHHHHHHHCC----CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCc----eee
Q 014285 127 VKVRE-ACQFLRQSPPTTLNFALDEIARILP----GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNS----LST 196 (427)
Q Consensus 127 ~~~~~-~~~~l~g~~~~~~~~~~~~l~~~~~----g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~----ip~ 196 (427)
..+++ +.|.|+|+++.+++.+|+.|.+... +...+++++||||||||++||..|+|||+||||. +++ +|+
T Consensus 68 ~~i~~~l~p~LiG~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG~~~~~~~~~~pv 147 (431)
T 2fym_A 68 AAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPV 147 (431)
T ss_dssp HHHHTHHHHHHTTSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTCCCCCE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhhCCCcccchhHHHHHHHHHHHHHHHHHHhCCcHHHHhcCcccccccccccc
Confidence 44554 8899999999999999999976311 1223478999999999999999999999999996 444 777
Q ss_pred ee------------eecCCC----H--HHHHHHHHHHhhcCCcEEE---------EeccC------CchhhHHHHHHHHH
Q 014285 197 AI------------TIPAVS----P--AEASELASKYCKLGFSTLK---------LNVGR------NITADFDVLQAIHA 243 (427)
Q Consensus 197 ~~------------~i~~~~----~--~~~~~~~~~~~~~Gf~~iK---------lKiG~------~~~~d~~~l~~ir~ 243 (427)
+. ++++.+ | +++.+++.++.++||+.+| +|+|. ++++|++++++||+
T Consensus 148 ~~~~~~~gg~~~~~~l~~~~~mi~p~~~~~~~~a~~~~~~g~~~lK~~l~~~g~~~kvG~~gg~~~~~~~d~~~l~~vre 227 (431)
T 2fym_A 148 PMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAE 227 (431)
T ss_dssp ECEEEEECGGGSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSSHHHHHHHHHH
T ss_pred eeEeeccCccccccccCcchhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCcccccCcccCCCCCccchHHHHHHHHH
Confidence 54 222233 4 6677788888899999999 99985 67889999999998
Q ss_pred -h-------CCCcEEEEeC----------------C-CCCCHHHHHHHHHHhhh-CCCCCceEeCCCCCCChhhHHHHHH
Q 014285 244 -V-------HPHCSFILDA----------------N-EGYTSEEAVEVLGKLND-MGVIPVLFEQPVHRDDWSGLHDVSN 297 (427)
Q Consensus 244 -~-------~~~~~L~vDA----------------N-~~~s~~~A~~~l~~L~~-~~l~~~~iEqP~~~~d~~~~~~L~~ 297 (427)
+ ++++.|+||+ | ++|++++|+++++.|++ |++ .|||||++++|++++++|++
T Consensus 228 ai~~~g~~~G~dv~l~vDaaas~~~~~~~Y~~~~~n~~~~t~~~ai~~~~~L~~~~~i--~~iEePl~~~d~~~~~~l~~ 305 (431)
T 2fym_A 228 AVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPI--VSIEDGLDESDWDGFAYQTK 305 (431)
T ss_dssp HHHHTTCCBTTTBEEEEECCGGGGEETTEEEEGGGTTEEECHHHHHHHHHHHHHHSCE--EEEESCSCTTCHHHHHHHHH
T ss_pred HHHHhccCCCCccEEEEeechhhccccCceeeccCCCCCCCHHHHHHHHHHHHHhCCc--eEEECCCCcccHHHHHHHHH
Confidence 6 6899999999 9 99999999999999998 986 69999999999999999986
Q ss_pred hhcccc--CCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHH
Q 014285 298 FARDTY--GISVVADE-SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFA 372 (427)
Q Consensus 298 ~~r~~~--~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~ 372 (427)
++ ++||++|| ++++..+++++++.+++|++|+|++++| ++++++++++|+++|++++++++. ||+++.+|.
T Consensus 306 ----~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~~~~GGite~~~i~~~A~~~g~~~~~~h~~get~~~~~a~ 381 (431)
T 2fym_A 306 ----VLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIAD 381 (431)
T ss_dssp ----HHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHH
T ss_pred ----HhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHCCCeEEEeCCCCCchHHHHHH
Confidence 46 89999999 9999999999999999999999999998 999999999999999999999888 999998877
Q ss_pred HHHHhhcCC
Q 014285 373 LHLAAGLGC 381 (427)
Q Consensus 373 ~hlaaal~~ 381 (427)
+|++++.++
T Consensus 382 la~a~~~~~ 390 (431)
T 2fym_A 382 LAVGTAAGQ 390 (431)
T ss_dssp HHHHTTCEE
T ss_pred HHHhcCCCc
Confidence 777766543
No 112
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=3.7e-46 Score=383.42 Aligned_cols=297 Identities=21% Similarity=0.261 Sum_probs=243.3
Q ss_pred eEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCCCC-----------------Ccc-hHHHHH
Q 014285 66 DVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVPLV-----------------TGD-QTKALV 127 (427)
Q Consensus 66 ~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~-----------------s~~-~~~~~~ 127 (427)
.|++|..+. +..+.| ++.++|+|+|++|++| ||+.|.+.. .+. ......
T Consensus 13 ~i~~~~~r~--------i~dsrg----~~~v~V~V~td~G~~G-ge~~p~~~~tG~~ea~elrd~~~~~~~g~~v~~a~~ 79 (444)
T 1w6t_A 13 IITDVYARE--------VLDSRG----NPTLEVEVYTESGAFG-RGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVD 79 (444)
T ss_dssp BEEEEEEEE--------EECTTS----CEEEEEEEEETTCCEE-EEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHH
T ss_pred hcceeEEEE--------EEcCCC----CceEEEEEEECCCCEe-eEecccccccccceeeeeccCcccccccccHHHHHH
Confidence 477777654 233443 3789999999999999 999875422 121 223344
Q ss_pred HHHH-HhhHhcCCCCCCHHHHHHHHHHHCC----CChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeee--
Q 014285 128 KVRE-ACQFLRQSPPTTLNFALDEIARILP----GSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAIT-- 199 (427)
Q Consensus 128 ~~~~-~~~~l~g~~~~~~~~~~~~l~~~~~----g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~-- 199 (427)
.+++ +.|.|+|+++.+++.+|+.|.+... +...+++++||||||||++||..|+|||+||||. ++++|+|.+
T Consensus 80 ~i~~~l~p~LiG~d~~~~~~i~~~l~~~~g~~~~~~~g~~A~~avd~AlwD~~ak~~g~Pl~~lLGG~~~~~vp~~~~~~ 159 (444)
T 1w6t_A 80 NVNNIIAEAIIGYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLGGFNTKVLPTPMMNI 159 (444)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHCTTCCEECEECEEE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhCCCccccchhHHHHHHHHHHHHHHHHHcCCcHHHHhCCCCcccccccccce
Confidence 4554 8899999999999999999876311 1223579999999999999999999999999996 788998763
Q ss_pred e-c---------C------CCHHHHHHHHHHHhhcCCcEEE---------EeccC------CchhhHHHHHHHHH-h---
Q 014285 200 I-P---------A------VSPAEASELASKYCKLGFSTLK---------LNVGR------NITADFDVLQAIHA-V--- 244 (427)
Q Consensus 200 i-~---------~------~~~~~~~~~~~~~~~~Gf~~iK---------lKiG~------~~~~d~~~l~~ir~-~--- 244 (427)
+ + . ...+++.+++.++.++||+++| +|+|. +++.|++++++||+ +
T Consensus 160 ~~gg~~a~~~l~~qe~mi~p~~~~~~~~a~~~~~~g~~~lK~~lk~kg~~~kvG~~gg~~~~~~~d~~~l~avreav~~a 239 (444)
T 1w6t_A 160 INGGSHSDAPIAFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSRGLETAVGDEGGFAPRFEGTEDGVETILAAIEAA 239 (444)
T ss_dssp EECGGGCSSSCCCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHT
T ss_pred eccccccccccchhHhhcCCcchhhHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCchHhHHHHHHHHHHHHHHh
Confidence 1 1 0 0113445666777788999999 78884 67889999999998 5
Q ss_pred ----CCCcEEEEeC---------CCC-------------CCHHHHHHHHHHhhh-CCCCCceEeCCCCCCChhhHHHHHH
Q 014285 245 ----HPHCSFILDA---------NEG-------------YTSEEAVEVLGKLND-MGVIPVLFEQPVHRDDWSGLHDVSN 297 (427)
Q Consensus 245 ----~~~~~L~vDA---------N~~-------------~s~~~A~~~l~~L~~-~~l~~~~iEqP~~~~d~~~~~~L~~ 297 (427)
++++.|+||+ |++ ||+++|++++++|.+ |++ .|||||++++|++++++|++
T Consensus 240 gy~pG~dv~L~vDaaas~~~~~~n~~y~~~~n~~~~~~~~t~~eai~~~~~l~~~~~i--~~iEePl~~~d~~~~~~l~~ 317 (444)
T 1w6t_A 240 GYVPGKDVFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPI--ITIEDGMDENDWDGWKALTE 317 (444)
T ss_dssp TCCBTTTBEEEEECCGGGGBC--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSCE--EEEESCSCTTCHHHHHHHHH
T ss_pred ccCCCCCcEEEEEccchhcccccCCceeeccccCcccCCCCHHHHHHHHHHHHHhCCc--EEEECCCChhhHHHHHHHHH
Confidence 7799999999 888 889999999999864 986 69999999999999999986
Q ss_pred hhcccc--CCeEEecCC-CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHH
Q 014285 298 FARDTY--GISVVADES-CRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFA 372 (427)
Q Consensus 298 ~~r~~~--~iPIa~dE~-~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~ 372 (427)
++ ++||++||+ +++..+++++++.+++|++|+|++++| ++++++++++|+++|++++++++. ||+++.+|.
T Consensus 318 ----~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~ia~lA~~~g~~v~~~h~~get~i~~~a~ 393 (444)
T 1w6t_A 318 ----RLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIAD 393 (444)
T ss_dssp ----HHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHH
T ss_pred ----hhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHCCCeEEecCCCCCchHHHHHH
Confidence 56 899999998 999999999999999999999999998 999999999999999999997666 999998888
Q ss_pred HHHHhhcCC
Q 014285 373 LHLAAGLGC 381 (427)
Q Consensus 373 ~hlaaal~~ 381 (427)
+|++++.++
T Consensus 394 lava~~~~~ 402 (444)
T 1w6t_A 394 IAVATNAGQ 402 (444)
T ss_dssp HHHHTTCCE
T ss_pred HHHhcCCCc
Confidence 888776554
No 113
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=1e-44 Score=371.14 Aligned_cols=297 Identities=20% Similarity=0.247 Sum_probs=237.4
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC----------------CCCc-chHHHHH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP----------------LVTG-DQTKALV 127 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~----------------~~s~-~~~~~~~ 127 (427)
|+|++|+++.+..|... +.++|+|+|++| +||||+.+.. .|.+ ....++.
T Consensus 4 m~I~~i~~~~v~~~~~~------------p~v~V~v~td~G-~G~ge~~sgastg~~ea~elrd~~~~~~~g~~v~~av~ 70 (432)
T 2ptz_A 4 MTIQKVHGREVLDSRGN------------PTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVK 70 (432)
T ss_dssp TSCCEEEEEEEECTTSC------------EEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHH
T ss_pred CEEEEEEEEEEecCCCC------------cEEEEEEEeCCc-EEEEEEecccccCcceeeeeccCcccccccccHHHHHH
Confidence 88999999998876543 468999999999 9999986431 1222 1223444
Q ss_pred HHHH-HhhHhcCCCCCCHHHHHHHHHHHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhC---CC-CC--ceee
Q 014285 128 KVRE-ACQFLRQSPPTTLNFALDEIARIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFG---GA-SN--SLST 196 (427)
Q Consensus 128 ~~~~-~~~~l~g~~~~~~~~~~~~l~~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg---g~-~~--~ip~ 196 (427)
.+++ +.|.|+|+++.+++.+|+.|.+.. .+...+++++||||||||+.||..|+|||+||| |. +. ++|+
T Consensus 71 ~v~~~iap~LiG~d~~~~~~i~~~m~~~~~~~~~~~~~~~Ai~aVd~AlwD~~ak~~g~Ply~lLG~~~G~~~~~~pvp~ 150 (432)
T 2ptz_A 71 NVNEVIGPALIGRDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPC 150 (432)
T ss_dssp HHHHTHHHHHTTCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEE
T ss_pred HHHHHHHHHHCCCChhhHHHHHHHHHHhhCCCCcchHHHHHHHHHHHHHHHHHHHHhCCcHHHHhccccCCCCcCCceeE
Confidence 4554 889999999999999999997641 122336799999999999999999999999999 86 33 4555
Q ss_pred eeeec--C-----CCHHHH---------HHHHHHHhhcCCcEEEEec----cC----------------CchhhHHH-HH
Q 014285 197 AITIP--A-----VSPAEA---------SELASKYCKLGFSTLKLNV----GR----------------NITADFDV-LQ 239 (427)
Q Consensus 197 ~~~i~--~-----~~~~~~---------~~~~~~~~~~Gf~~iKlKi----G~----------------~~~~d~~~-l~ 239 (427)
|..+. . .+++++ .+++.++.++||+++|+|+ |. +.++|+++ ++
T Consensus 151 ~~~i~gg~~a~~~~~~qe~mi~p~~~~~~~ea~~~~~eg~~~lK~~l~~k~G~~at~vgdegg~~p~~~~~~~~l~~i~~ 230 (432)
T 2ptz_A 151 FNVINGGKHAGNALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILME 230 (432)
T ss_dssp EEEEECSTTSSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHH
T ss_pred EEEecCcccccCCCCHHHhcccCcccCCHHHHHHHHHHHHHHHHHHhHhhcCCCccccCCccCcCCCcccHHHHHHHHHH
Confidence 55432 1 123333 6677788899999999865 53 24788996 89
Q ss_pred HHHHhCC--CcEEEEeCCCCC---------------------CHHHHHHHH-HHhhhCCCCCceEeCCCCCCChhhHHHH
Q 014285 240 AIHAVHP--HCSFILDANEGY---------------------TSEEAVEVL-GKLNDMGVIPVLFEQPVHRDDWSGLHDV 295 (427)
Q Consensus 240 ~ir~~~~--~~~L~vDAN~~~---------------------s~~~A~~~l-~~L~~~~l~~~~iEqP~~~~d~~~~~~L 295 (427)
+||++++ ++.|++|+|++| +..++++++ +.+++|++ .|||||++++||+++++|
T Consensus 231 Air~~G~~g~v~l~vDan~~~~~~~~~~~y~~~~~~~~~~~~~a~~~~~~~~~~l~~y~i--~~iEdPl~~~D~~g~~~l 308 (432)
T 2ptz_A 231 AIEEAGHRGKFAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCKWAHDYPI--VSIEDPYDQDDFAGFAGI 308 (432)
T ss_dssp HHHHTTCTTSCEEEEECCGGGGEETTTTEEETTTTSSSCCEECHHHHHHHHHHHHHHSCE--EEEECCSCTTCHHHHHHH
T ss_pred HHHHhCCcCCcEEEEECcccccccccCceeEeeccccccCCCCHHHHHHHHHHHHHhCCc--eEEECCCCcchHHHHHHH
Confidence 9998887 899999999885 455665555 67899986 699999999999999999
Q ss_pred HHhhcccc--CCeEEecCC-CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEccc-CchhHHHH
Q 014285 296 SNFARDTY--GISVVADES-CRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGM-IETRLATG 370 (427)
Q Consensus 296 ~~~~r~~~--~iPIa~dE~-~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~-~es~ig~~ 370 (427)
++ ++ ++||++||. +++..+++++++.+++|++|+|++++| ++++++++++|+++|++++++++ .|+.++..
T Consensus 309 ~~----~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~~~~GGitea~~i~~lA~~~g~~v~~~h~~get~~~~~ 384 (432)
T 2ptz_A 309 TE----ALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYI 384 (432)
T ss_dssp HH----HTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHH
T ss_pred HH----hcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEecCCCCccHHHHH
Confidence 86 46 899999995 789999999999999999999999998 99999999999999999998665 48888877
Q ss_pred HHHHHHhhcC
Q 014285 371 FALHLAAGLG 380 (427)
Q Consensus 371 a~~hlaaal~ 380 (427)
|.+|++.+.+
T Consensus 385 a~lava~~~~ 394 (432)
T 2ptz_A 385 ADLVVALGSG 394 (432)
T ss_dssp HHHHHHHTCS
T ss_pred HHHHHHhCCC
Confidence 7777766554
No 114
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=100.00 E-value=1.2e-42 Score=355.45 Aligned_cols=301 Identities=23% Similarity=0.292 Sum_probs=232.0
Q ss_pred eeeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC----------------CCCc-chHHHH
Q 014285 64 WVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP----------------LVTG-DQTKAL 126 (427)
Q Consensus 64 ~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~----------------~~s~-~~~~~~ 126 (427)
.|+|++|..+.+- .+. ..++|.|+|+|++|.+|+|++.... .|.+ ....++
T Consensus 25 ~m~I~~i~~r~i~--------dsr----g~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~g~~v~~av 92 (449)
T 3uj2_A 25 YLEIEKVIGREII--------DSR----GNPTVEAEVYLAGGVTGRGTAPSGASTGEFEALELRDGDKGRFGGKGVTKAV 92 (449)
T ss_dssp TTBEEEEEEEEEE--------CTT----SCEEEEEEEEETTSCEEEEECCBC---CCSSCCCCCCCCTTSGGGTCCHHHH
T ss_pred ceEEEEEEEEEEE--------CCC----CCCeEEEEEEECCCCEEEEeccCCCcCcceeEEEeccCCcccccchhHHHHH
Confidence 4899999876531 111 1378999999999999999875421 2333 223444
Q ss_pred HHHH-HHhhHhcCCCCCCHHHHHHHHHHHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCCC-Cceee--ee
Q 014285 127 VKVR-EACQFLRQSPPTTLNFALDEIARIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGAS-NSLST--AI 198 (427)
Q Consensus 127 ~~~~-~~~~~l~g~~~~~~~~~~~~l~~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~~-~~ip~--~~ 198 (427)
..++ .+.|.|+|+++.+++.+|+.|.+.. .+....++++||||||||+.||.+|+|||+||||.. +++|+ |.
T Consensus 93 ~~v~~~iap~LiG~d~~~~e~i~~~m~~~dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLGG~~~~~lpvp~~n 172 (449)
T 3uj2_A 93 QNINTEISEILSGMDASDIYAVDRAMIDADGTKDKSKFGANAVLAVSIACAKAAAAALGVPLYRFLGGLNANRLPVPMMN 172 (449)
T ss_dssp HHHHTHHHHHHTTSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHGGGCCBCCEECEE
T ss_pred HHHHHHHHHHHccCCccCHHHHHHHHHHhcCcCCcchhhHHHHHHHHHHHHHHHHHHhCCCHHHHhCCCCCCceeeeeEE
Confidence 4454 3889999999999999999998742 122335799999999999999999999999999984 56666 44
Q ss_pred ee--cCC-----CHHH---------HHHHHHHHhhcCCcEEEE--e-------ccC------C---chhhHHHH-HHHHH
Q 014285 199 TI--PAV-----SPAE---------ASELASKYCKLGFSTLKL--N-------VGR------N---ITADFDVL-QAIHA 243 (427)
Q Consensus 199 ~i--~~~-----~~~~---------~~~~~~~~~~~Gf~~iKl--K-------iG~------~---~~~d~~~l-~~ir~ 243 (427)
.+ +.. +.++ ..+++.++.++||+++|+ | +|. + .+++++++ ++||+
T Consensus 173 ~inGG~ha~~~~~~qEfmi~P~ga~~~~ea~~~~~egy~~lK~~lk~~g~~t~vGdeggfap~~~~~~e~l~~i~~AIr~ 252 (449)
T 3uj2_A 173 ILNGGAHAANTVDVQEFMIMPVGAESFREALRQCTEVFHALAGLLKSKGLATSVGDEGGFAPDLASDEEAIEYILEAVKL 252 (449)
T ss_dssp EEECSTTSSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSCHHHHHHHHHHHHHH
T ss_pred EecCcccCCCccchhhhhhCCcccccHHHHHHHHHHHHHHHHHHHhhcCCccccCCCCCcCCCccCHHHHHHHHHHHHHH
Confidence 33 211 1221 345666778899999998 4 552 2 35677777 78888
Q ss_pred h----CCCcEEEEeCCC------------------CCCHHHHHHHHHH-hhhCCCCCceEeCCCCCCChhhHHHHHHhhc
Q 014285 244 V----HPHCSFILDANE------------------GYTSEEAVEVLGK-LNDMGVIPVLFEQPVHRDDWSGLHDVSNFAR 300 (427)
Q Consensus 244 ~----~~~~~L~vDAN~------------------~~s~~~A~~~l~~-L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r 300 (427)
. |+++.|++|+|+ .||+++|++++++ |++|++ .|||||++++||+++++|++.+
T Consensus 253 agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y~i--~~IEdPl~~dD~eg~~~L~~~~- 329 (449)
T 3uj2_A 253 AGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERYPI--VSIEDGLDEEDWEGWQYMTREL- 329 (449)
T ss_dssp TTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHSCE--EEEESCSCTTCHHHHHHHHHHH-
T ss_pred hccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhcCc--eEEECCCCcchHHHHHHHHHHh-
Confidence 6 568999999984 3689999999986 899986 5999999999999999998721
Q ss_pred cccCCeEEecCCCC-CHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcc-cCchhHHHHHHHHHHh
Q 014285 301 DTYGISVVADESCR-SLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDG-MIETRLATGFALHLAA 377 (427)
Q Consensus 301 ~~~~iPIa~dE~~~-~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s-~~es~ig~~a~~hlaa 377 (427)
..++||++||++. ++.+++++++.+++|++|+|++++| +|++++++++|+++|+++++++ ..|+..+.. +||+.
T Consensus 330 -~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~v~H~sgET~d~~i--adLaV 406 (449)
T 3uj2_A 330 -GDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGETEDTTI--ADLAV 406 (449)
T ss_dssp -TTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHH--HHHHH
T ss_pred -CCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHH--HHHHH
Confidence 2289999999976 6999999999999999999999998 9999999999999999966555 447876654 46666
Q ss_pred hcCCc
Q 014285 378 GLGCI 382 (427)
Q Consensus 378 al~~~ 382 (427)
++++.
T Consensus 407 a~~~~ 411 (449)
T 3uj2_A 407 ALNTG 411 (449)
T ss_dssp HTTCC
T ss_pred HhCCC
Confidence 65543
No 115
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=100.00 E-value=3.8e-42 Score=348.89 Aligned_cols=297 Identities=21% Similarity=0.244 Sum_probs=233.8
Q ss_pred eEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecC---------------CCCCc-chHHHHHHH
Q 014285 66 DVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVV---------------PLVTG-DQTKALVKV 129 (427)
Q Consensus 66 ~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~---------------~~~s~-~~~~~~~~~ 129 (427)
+|++|..+.+ ..|. ..++|.|+|+|++|.+|++.+... +.|.+ ....++..+
T Consensus 6 ~i~~i~~r~i--------~dsr----G~ptvev~v~t~~g~~g~a~vpsgastg~~ea~elrd~~~~y~gkgv~~av~~v 73 (417)
T 3qn3_A 6 VIEDVRAYEV--------LDSR----GNPTVKAEVTLSDGSVGAAIVPSGASTGSKEALELRDNDERFGGKGVLKAVANV 73 (417)
T ss_dssp BEEEEEEEEE--------ECTT----SCEEEEEEEEETTCCEEEEECCCCBSSCSSSCBCCCCCSTGGGGTCCHHHHHHH
T ss_pred eeeEEEEEEE--------EcCC----CCceEEEEEEECCCCEEEEecCCCCccccceeeeecCCCccccCccHHHHHHHH
Confidence 5788876542 2232 267899999999999999865321 01222 123445555
Q ss_pred HH-HhhHhcCCCCCCHHHHHHHHHHHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCCC-CCceeeeee--e-
Q 014285 130 RE-ACQFLRQSPPTTLNFALDEIARIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGGA-SNSLSTAIT--I- 200 (427)
Q Consensus 130 ~~-~~~~l~g~~~~~~~~~~~~l~~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg~-~~~ip~~~~--i- 200 (427)
++ +.|.|+|+++.+++.+|+.|.+.. .+....++++||||||||+.||..|+|||+||||. ++++|+|.. +
T Consensus 74 ~~~iap~LiG~d~~~~~~id~~m~~~dgt~~k~~lg~nAi~aVs~Al~da~ak~~g~PLy~lLGG~~~~~lPv~~~nvin 153 (417)
T 3qn3_A 74 NETIADEILGLDAFNQTQLDDTLRELDGTNNYSNLGANATLGVSMATARAAAAALGMPLYRYLGGANASILPVPMCNIIN 153 (417)
T ss_dssp HTHHHHHHTTSBTTCHHHHHHHHHHHHCSSSCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHGGGCCEECEEEEEEEE
T ss_pred HHHHHHHHCCCCccCHHHHHHHHHHhhccCCCCchhhhhHHHHHHHHHHHHHHHhCCcHHHHhCCCCCcceeeeeeeeec
Confidence 54 889999999999999999998742 12334679999999999999999999999999998 678998853 1
Q ss_pred -cC-----CCHHHH------HHHHHHHhhcC---CcEEEE---------eccC---------CchhhHHHH-HHHHHhC-
Q 014285 201 -PA-----VSPAEA------SELASKYCKLG---FSTLKL---------NVGR---------NITADFDVL-QAIHAVH- 245 (427)
Q Consensus 201 -~~-----~~~~~~------~~~~~~~~~~G---f~~iKl---------KiG~---------~~~~d~~~l-~~ir~~~- 245 (427)
+. .++++. .+.+++.++.| |+++|+ |+|. +.++|++++ ++||+.|
T Consensus 154 GG~ha~~~~~~qe~mi~P~ga~~~~ea~~~G~evy~~lK~~l~~kg~~t~vGdegg~ap~~~~~~e~l~~i~~Air~aGy 233 (417)
T 3qn3_A 154 GGAHANNNVDFQEFMIMPFGFTSFKEALRSVCEIYAILKKELANSGHSTALGDEGGFAPNLANNTEPIDLLMTCIKKAGY 233 (417)
T ss_dssp CGGGSSSSCCCSEEEEEECSCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSSSSHHHHHHHHHHHHTTC
T ss_pred CcccCCCcccHHHHhcCccchHHHHHHHHHhHHHHHHHHHHHHhcCcccccCCCCCcCCCcCCHHHHHHHHHHHHHHcCC
Confidence 11 122221 23344455666 888888 6663 357899998 8999987
Q ss_pred -CCcEEEEeCCCC--------------CCHHHHHHHHHH-hhhCCCCCceEeCCCCCCChhhHHHHHHhhcccc--CCeE
Q 014285 246 -PHCSFILDANEG--------------YTSEEAVEVLGK-LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY--GISV 307 (427)
Q Consensus 246 -~~~~L~vDAN~~--------------~s~~~A~~~l~~-L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~--~iPI 307 (427)
|++.|++|+|++ ||+++|+++++. +++|++ .|||||++++||+++++|++ ++ ++||
T Consensus 234 ~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~i--~~IEdPl~~dD~e~~~~L~~----~~g~~ipI 307 (417)
T 3qn3_A 234 ENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPI--CSIEDGLAENDFEGWIKLTE----KLGNKIQL 307 (417)
T ss_dssp TTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCE--EEEESSSCTTCHHHHHHHHH----HHTTTSEE
T ss_pred CCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcce--eEEecCCCcccHHHHHHHHH----hhCCCCce
Confidence 899999999986 579999999998 899986 69999999999999999987 45 6999
Q ss_pred EecCCCCC-HHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCCc
Q 014285 308 VADESCRS-LNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCI 382 (427)
Q Consensus 308 a~dE~~~~-~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~~ 382 (427)
++||++.+ +.+++++++.+++|++++|++++| +|++++++++|+++|+++|++++. |+..+. ++||+.++++.
T Consensus 308 ~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~vsh~sgEt~d~~--iadlava~~~~ 383 (417)
T 3qn3_A 308 VGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCVMSHRSGESEDAF--IADFAVALNTG 383 (417)
T ss_dssp EESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCH--HHHHHHHTTCS
T ss_pred ecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHH--HHHHHHHhCCC
Confidence 99999887 999999999999999999999998 999999999999999999988765 776654 45666666553
No 116
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=4.9e-41 Score=341.83 Aligned_cols=283 Identities=23% Similarity=0.283 Sum_probs=221.6
Q ss_pred eeEEEEEEEEcCCceEEEEeecCC----------------CCCc-chHHHHHHHH-HHhhHhcCCCCCCHHHHHHHHHHH
Q 014285 93 VENVAIRVELSNGCVGWGEVAVVP----------------LVTG-DQTKALVKVR-EACQFLRQSPPTTLNFALDEIARI 154 (427)
Q Consensus 93 ~~~vlV~v~t~~G~~G~GE~~~~~----------------~~s~-~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~l~~~ 154 (427)
.++|.|+|+|++|.+|+|.+.... .|.+ ....++..++ .+.|.|+|+++.+++.+|+.|.+.
T Consensus 19 ~ptvev~v~t~~G~~G~~~~psgastG~~ea~elrd~~~~~y~gkgv~~av~~v~~~iap~LiG~d~~~~~~i~~~m~~~ 98 (428)
T 3tqp_A 19 NPTLEVRVTLSSQAYGCAAVPSGASTGEREAVELRDNDLERYGGKGVLQAVENVNGPIRDALLGQDPRSQEEIDRIMIEL 98 (428)
T ss_dssp CEEEEEEEEETTSCEEEEECCBCC---CCSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTTCCTTCHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCEEEEeccccccCCcceeEeecCCCccccccccHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHh
Confidence 478999999999999999654321 1222 1233444454 488999999999999999999874
Q ss_pred C----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhCC-CC---CceeeeeeecCC-------CHHH---------HHH
Q 014285 155 L----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFGG-AS---NSLSTAITIPAV-------SPAE---------ASE 210 (427)
Q Consensus 155 ~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llgg-~~---~~ip~~~~i~~~-------~~~~---------~~~ 210 (427)
. .+....++++||||||||+.||.+|+|||+|||| .+ .++|+|..+... +.++ ..+
T Consensus 99 dgt~~k~~lg~nAi~aVd~Alwda~ak~~g~PLy~lLGG~~~~~~~pvp~~~~inGG~ha~~~~~~qefmi~P~ga~~~~ 178 (428)
T 3tqp_A 99 DGTENKANLGANAILGVSLAVAYAAANNADLPLYRYLGGDGGPFSMPVPMMNIINGGAHATNNLDFQEFMIVPVGAPTFA 178 (428)
T ss_dssp HCCTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTTCCCCBCEEEEEEEECC----CCCSSSEEEEECTTCSSHH
T ss_pred cCcCCcCccchhHHHHHHHHHHHHHHHHcCCCHHHHhCCCCCCceeeeEEEEEecCcccCCCccchhHHhhcCcchhhHH
Confidence 2 1233357899999999999999999999999999 53 467777654221 1122 345
Q ss_pred HHHHHhhcCCcEEEEe---------cc------CCchhhHHH----HHHHHHh----CCCcEEEEeC-------------
Q 014285 211 LASKYCKLGFSTLKLN---------VG------RNITADFDV----LQAIHAV----HPHCSFILDA------------- 254 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlK---------iG------~~~~~d~~~----l~~ir~~----~~~~~L~vDA------------- 254 (427)
++.++.++||+.+|+| +| ++++.|.+. +++||+. |+++.|++|+
T Consensus 179 ea~~~~~egy~~lK~~l~~~g~~t~vGdegg~ap~~~~~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l 258 (428)
T 3tqp_A 179 EALRYGAEVFHALKKRLVSRGLMSAVGDEGGFAPDLPNNEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDF 258 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECC
T ss_pred HHHHHHHHHHHhHhhhhcccccccccCCCCCcCCCcccHHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceec
Confidence 6667788999999998 55 234445555 6899986 4699999999
Q ss_pred -CCCCCHHHHHHHHHH-hhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecC-CCCCHHHHHHHHHcCCCcEE
Q 014285 255 -NEGYTSEEAVEVLGK-LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADE-SCRSLNDVQKVMQENLASVV 331 (427)
Q Consensus 255 -N~~~s~~~A~~~l~~-L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i 331 (427)
|++||+++|+++++. +++|++ .|||||++++||+++++|++.+ ..++||++|| .+.+..+++++++.+++|++
T Consensus 259 ~~~~~t~~eai~~~~~ll~~y~i--~~IEdPl~~dD~eg~~~L~~~~--~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i 334 (428)
T 3tqp_A 259 ENNQLTSEEMIDRLTEWTKKYPV--ISIEDGLSENDWAGWKLLTERL--ENKVQLVGDDIFVTNPDILEKGIKKNIANAI 334 (428)
T ss_dssp SSSCBCHHHHHHHHHHHHHHSCE--EEEECCSCTTCHHHHHHHHHHH--TTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred cccccCHHHHHHHHHHHHhhccc--ceEeCCCCcccHHHHHHHHHhc--CCCcceeccccccCCHHHHHHHHHhCCCCEE
Confidence 589999999999998 899986 6999999999999999998732 2358888888 57899999999999999999
Q ss_pred EeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCC
Q 014285 332 NIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGC 381 (427)
Q Consensus 332 ~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~ 381 (427)
|+|++++| +|++++++++|+++|++++++++. |+..+..| ||+.++++
T Consensus 335 ~iKv~~iGGiTealkia~lA~~~G~~~~v~H~sGEted~~ia--dLaVa~~~ 384 (428)
T 3tqp_A 335 LVKLNQIGTLTETLATVGLAKSNKYGVIISHRSGETEDTTIA--DLAVATDA 384 (428)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHH--HHHHHTTC
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEEEeCCCCCchHHHHH--HHHHHcCC
Confidence 99999998 999999999999999997666544 77666554 55555544
No 117
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=5.2e-40 Score=335.80 Aligned_cols=281 Identities=18% Similarity=0.202 Sum_probs=214.8
Q ss_pred eeEEEEEEEEcCCceEEEEeecCC----------------CCCc-chHHHHHHHHH-HhhHhc--CCCCCCHHHHHHHHH
Q 014285 93 VENVAIRVELSNGCVGWGEVAVVP----------------LVTG-DQTKALVKVRE-ACQFLR--QSPPTTLNFALDEIA 152 (427)
Q Consensus 93 ~~~vlV~v~t~~G~~G~GE~~~~~----------------~~s~-~~~~~~~~~~~-~~~~l~--g~~~~~~~~~~~~l~ 152 (427)
.+.++|+|+|++| +||||+.... .|.+ ....++..+++ +.|.|+ |+++.+++.+|+.|.
T Consensus 16 ~~tv~V~V~t~~G-~G~g~~psgastG~~ea~elrd~~~~~~~g~~v~~av~~v~~~iap~Li~~G~d~~~~~~i~~~m~ 94 (436)
T 2al1_A 16 NPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKANIDVKDQKAVDDFLI 94 (436)
T ss_dssp CEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHTCCTTCHHHHHHHHH
T ss_pred CcEEEEEEEECCc-eEEEeecccccCCcceeeeeccCccccccCccHHHHHHHHHHHHHHHHHHCCCChhhHHHHHHHHH
Confidence 3579999999999 9999975321 1222 12334445555 889999 999999999999987
Q ss_pred HHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhC---CCC---Cceeeeee--e--cC---C--C---------
Q 014285 153 RIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFG---GAS---NSLSTAIT--I--PA---V--S--------- 204 (427)
Q Consensus 153 ~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg---g~~---~~ip~~~~--i--~~---~--~--------- 204 (427)
+.. .+...+++++||||||||+.||.+|+|||+||| |.. +++|++.. + +. + +
T Consensus 95 ~~dgt~~~~~lg~~Ai~aVd~Al~Da~ak~~g~PLy~lLG~l~G~~~~~~~lpvp~~n~inGg~ha~~~~~~qefmi~p~ 174 (436)
T 2al1_A 95 SLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSHAGGALALQEFMIAPT 174 (436)
T ss_dssp HHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEEEECGGGSSSSCCSCEEEEECT
T ss_pred HhcCCcccchhHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCcCceeeEEEEEeecCccccCCccccccceecCc
Confidence 631 123346799999999999999999999999999 864 56777432 1 10 0 0
Q ss_pred HHHHHHHHHHHhhcCCcEEEE----e-------cc------CCchhhHHHHHHHHH----hCC--CcEEEEeC-------
Q 014285 205 PAEASELASKYCKLGFSTLKL----N-------VG------RNITADFDVLQAIHA----VHP--HCSFILDA------- 254 (427)
Q Consensus 205 ~~~~~~~~~~~~~~Gf~~iKl----K-------iG------~~~~~d~~~l~~ir~----~~~--~~~L~vDA------- 254 (427)
..+..+++.++.++||+.+|. | +| ++++.+.+.++.|++ .++ ++.|++|+
T Consensus 175 ~a~~~~ea~~~~~e~~~~lK~~l~~k~G~~a~~vGdegg~~p~~~~~~~~l~~i~~ai~~~G~~g~v~l~vD~aase~~~ 254 (436)
T 2al1_A 175 GAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEFFK 254 (436)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEE
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCccCHHHHHHHHHHHHHHcCCCcceEEEEechhhhhcc
Confidence 011223444455667777773 3 43 134556666666655 354 79999999
Q ss_pred ---------------CCCCCHHHHHHHHH-HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCC-CCHH
Q 014285 255 ---------------NEGYTSEEAVEVLG-KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESC-RSLN 317 (427)
Q Consensus 255 ---------------N~~~s~~~A~~~l~-~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~-~~~~ 317 (427)
|++||+++|++++. .+++|++ .|||||++++||+++++|++ ++++||++||+. +++.
T Consensus 255 n~~y~~~~~~~~~~~~~~~t~~eai~~~~~~l~~y~i--~~iEdPl~~dD~~g~~~l~~----~~~ipI~gDE~~vt~~~ 328 (436)
T 2al1_A 255 DGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPI--VSIEDPFAEDDWEAWSHFFK----TAGIQIVADDLTVTNPK 328 (436)
T ss_dssp TTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCE--EEEECCSCTTCHHHHHHHHT----TCCSEEEESTTTTTCHH
T ss_pred CCceEEecccccccccccCCHHHHHHHHHHHHHhCCc--EEEECCCCCcCHHHHHHHHh----cCCCeEEECCcccCCHH
Confidence 44568899987755 5688986 59999999999999999986 689999999985 6899
Q ss_pred HHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEccc-CchhHHHHHHHHHHhhcC
Q 014285 318 DVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGM-IETRLATGFALHLAAGLG 380 (427)
Q Consensus 318 ~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~-~es~ig~~a~~hlaaal~ 380 (427)
+++++++.+++|++++|++++| +|++++++++|+++|+.++++++ .|+.++..|.+|++.+.+
T Consensus 329 ~~~~~i~~~a~d~i~ikv~qiGGitea~~ia~lA~~~g~~~~~sh~sgEt~~~~iA~lava~~~~ 393 (436)
T 2al1_A 329 RIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTG 393 (436)
T ss_dssp HHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCS
T ss_pred HHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEEecCCCchHHHHHHHHHHHhcCC
Confidence 9999999999999999999998 99999999999999999988654 589888777777776654
No 118
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=2.5e-39 Score=330.99 Aligned_cols=281 Identities=20% Similarity=0.220 Sum_probs=215.0
Q ss_pred eeEEEEEEEEcCCceEEEEeecCC----------------CCCc-chHHHHHHHHH-HhhHhc--CCCCCCHHHHHHHHH
Q 014285 93 VENVAIRVELSNGCVGWGEVAVVP----------------LVTG-DQTKALVKVRE-ACQFLR--QSPPTTLNFALDEIA 152 (427)
Q Consensus 93 ~~~vlV~v~t~~G~~G~GE~~~~~----------------~~s~-~~~~~~~~~~~-~~~~l~--g~~~~~~~~~~~~l~ 152 (427)
.+.++|+|+|++|+ |||++.... .|.+ ....++..+++ +.|.|+ |+++.+++.+|+.|.
T Consensus 16 ~~tv~V~V~t~~G~-G~~~~psgastG~~Ea~el~d~~~~~~~g~~v~~av~~v~~~iap~Li~~G~d~~~~~~i~~~m~ 94 (439)
T 2akz_A 16 NPTVEVDLYTAKGL-FRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISSGLSVVEQEKLDNLML 94 (439)
T ss_dssp CEEEEEEEEETTEE-EEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHHCCCTTCHHHHHHHHH
T ss_pred CceEEEEEEECCCc-eEeeccCCCceeEEEEeeccCCCccccCCCcHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHH
Confidence 35799999999999 998765421 1222 12334445555 889999 999999999999987
Q ss_pred HHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhC---CC-CCceeeeee--ecCC-------C---------HH
Q 014285 153 RIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFG---GA-SNSLSTAIT--IPAV-------S---------PA 206 (427)
Q Consensus 153 ~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg---g~-~~~ip~~~~--i~~~-------~---------~~ 206 (427)
+.. .+...+++++||||||||+.||.+|+|||+||| |. ++++|++.. +... + ..
T Consensus 95 ~~dgt~~~~~lg~nAi~aVs~Al~Da~ak~~g~PLy~lLG~~~G~~~~~lpvp~~~~inGg~ha~~~~~~qefmi~p~~a 174 (439)
T 2akz_A 95 ELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAGNKLAMQEFMILPVGA 174 (439)
T ss_dssp HHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEECGGGSSSSCCSCEEEEECTTC
T ss_pred HhcCCcccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcccCCCCceeEEEEEEEecCccccccccccccceecCCCc
Confidence 631 123346799999999999999999999999999 86 567887532 1000 0 01
Q ss_pred HHHHHHHHHhhcCCcEEEE----e-------cc------CCchhhHHHHHHHHH----hCC--CcEEEEeC---------
Q 014285 207 EASELASKYCKLGFSTLKL----N-------VG------RNITADFDVLQAIHA----VHP--HCSFILDA--------- 254 (427)
Q Consensus 207 ~~~~~~~~~~~~Gf~~iKl----K-------iG------~~~~~d~~~l~~ir~----~~~--~~~L~vDA--------- 254 (427)
+..+++.++.++||+.+|. | +| ++++.+.+.++.|++ +++ ++.|++|+
T Consensus 175 ~~~~ea~~~~~e~~~~lK~~lk~k~G~~~~~vGdegg~~p~~~~~~e~l~~i~~ai~~~G~~g~v~l~vD~a~se~~~~g 254 (439)
T 2akz_A 175 ESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFYRDG 254 (439)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcCCCccccCcccCcCCCcccHHHHHHHHHHHHHHcCCccceEEEEechHhhhccCC
Confidence 1223444555667877773 3 33 124556667766665 354 79999999
Q ss_pred ------------CCCCCHHHHHHHHHH-hhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCC-CCCHHHHH
Q 014285 255 ------------NEGYTSEEAVEVLGK-LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES-CRSLNDVQ 320 (427)
Q Consensus 255 ------------N~~~s~~~A~~~l~~-L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~-~~~~~~~~ 320 (427)
|+.||++++++++.+ +++|++ .|||||++++||+++++|++ ++++||++||. ++++.+++
T Consensus 255 ~y~l~~~~~~~~~~~~t~~e~~~~~~~ll~~y~i--~~IEdPl~~dD~~g~~~L~~----~~~ipI~gDE~~vt~~~~~~ 328 (439)
T 2akz_A 255 KYDLDFKSPTDPSRYITGDQLGALYQDFVRDYPV--VSIEDPFDQDDWAAWSKFTA----NVGIQIVGDDLTVTNPKRIE 328 (439)
T ss_dssp EECTTTTSSCCGGGCBCHHHHHHHHHHHHHHSCE--EEEECCSCTTCHHHHHHHHH----TCSSEEEESTTTTTCHHHHH
T ss_pred eeEEeccccccccccCCHHHHHHHHHHHHHhCCC--cEEECCCCcccHHHHHHHHh----CCCCEEEeCCCccCCHHHHH
Confidence 445688998877654 688986 69999999999999999986 68999999997 47999999
Q ss_pred HHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcc-cCchhHHHHHHHHHHhhcC
Q 014285 321 KVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDG-MIETRLATGFALHLAAGLG 380 (427)
Q Consensus 321 ~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s-~~es~ig~~a~~hlaaal~ 380 (427)
++++.+++|++++|++++| ++++++++++|+++|+.+++++ +.|+.++..|.+|++.+.+
T Consensus 329 ~~i~~~a~d~i~iKv~qiGGitea~~ia~lA~~~g~~~~~sh~~gEt~~~~iA~lava~~~~ 390 (439)
T 2akz_A 329 RAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTG 390 (439)
T ss_dssp HHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCS
T ss_pred HHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHCCCeEEeecCCCccHHHHHHHHHHHhcCC
Confidence 9999999999999999998 9999999999999999988854 5589888888777776654
No 119
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=99.94 E-value=7.1e-25 Score=220.65 Aligned_cols=295 Identities=21% Similarity=0.271 Sum_probs=207.6
Q ss_pred eeEEEEEEEEEEeeccccccccceeEEeeeEEEEEEEEcCCceEEEEeecCC----------------CCCc-chHHHHH
Q 014285 65 VDVQRAEGRELNVALSAPLSLGLSSVENVENVAIRVELSNGCVGWGEVAVVP----------------LVTG-DQTKALV 127 (427)
Q Consensus 65 ~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~v~t~~G~~G~GE~~~~~----------------~~s~-~~~~~~~ 127 (427)
|.|++|..+.+ ..|+| .++|-|+|.|++|.. .+-+.... .|.+ ....++.
T Consensus 6 m~I~~i~ar~i--------ldsrG----nptvev~v~~~~g~~-ra~vPsgaStG~~Ea~elrd~d~~~y~Gkgv~kAv~ 72 (441)
T 3qtp_A 6 MSIQKVHAREI--------LDSRG----NPTIEVEITTGKGMF-RSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVE 72 (441)
T ss_dssp TBCCEEEEEEE--------ECTTS----CEEEEEEEEETTEEE-EEECCCCCSCCSSSCCCCCCCCTTSGGGTCCHHHHH
T ss_pred cEEEEEEEEEE--------ECCCC----CEEEEEEEEECCCcE-EEecccCCCCCcceeEeecCCCcccccCccHHHHHH
Confidence 66777776542 12222 578899999998865 43332210 1222 2334556
Q ss_pred HHHH-HhhHhcCCCCCCHHHHHHHHHHHC----CCChhhhHHHHHHHHHHHHHHhhCCCChhhhhC---CC-CCceeeee
Q 014285 128 KVRE-ACQFLRQSPPTTLNFALDEIARIL----PGSEFASVRAGVEMALIDAVANSIDIPLWRLFG---GA-SNSLSTAI 198 (427)
Q Consensus 128 ~~~~-~~~~l~g~~~~~~~~~~~~l~~~~----~g~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg---g~-~~~ip~~~ 198 (427)
.+++ +.|.|+|.++.+.+.+++.|.+.- ....-.+++.|+.+|++.+.|+..|+|||++++ |. ...+|+..
T Consensus 73 ~vn~~iap~Lig~~~~dQ~~iD~~m~~lDgT~nks~lGaNail~vSlAvakAaA~~~~~PLy~~l~~l~g~~~~~lPvP~ 152 (441)
T 3qtp_A 73 NVNTIIGPALLGKNVLNQAELDEMMIKLDGTNNKGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPC 152 (441)
T ss_dssp HHHHTHHHHHTTCBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCCCCBCEEE
T ss_pred HHHHHHHHHHhcCChhhHHHHHHHHHhccCCCCccCCCccchhhHHHHHHHHHHHhcCCcHHHHHHhhcCCCCceeccce
Confidence 6655 789999999999999998887631 122336789999999999999999999999996 43 33444421
Q ss_pred --e------------------ec--CCCHHHHHHH-------HHHHhhc--CCcEEEEecc------CCc---hhhHHHH
Q 014285 199 --T------------------IP--AVSPAEASEL-------ASKYCKL--GFSTLKLNVG------RNI---TADFDVL 238 (427)
Q Consensus 199 --~------------------i~--~~~~~~~~~~-------~~~~~~~--Gf~~iKlKiG------~~~---~~d~~~l 238 (427)
. +| ..++.+..+. .++.++. |... ..+| +++ ++-++.|
T Consensus 153 ~nvinGG~ha~n~l~~QEfmi~P~ga~sf~ealr~~~evyh~Lk~~l~~k~g~~~--t~vgdEGgfap~~~~~~eaL~ll 230 (441)
T 3qtp_A 153 FNVINGGAHAGNALAMQEFMICPTGATNFHEALRMAAETYQCLKVVIKAKYGQDA--TNVGDEGGFAPNVSGAREALDLL 230 (441)
T ss_dssp EEEEECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGG--GCBCTTSCBCCCCSSHHHHHHHH
T ss_pred EeeecCCccCCCccccceeeeeccCCCCHHHHHHHHHHHHHHHHHHHHHhcCccc--ccccCCcccCCCCCCHHHHHHHH
Confidence 1 11 1244443221 2222221 3210 1122 233 4445554
Q ss_pred -HHHHHhC--CCcEEEEeCC---------C-----------------CCCHHHHHHHHHH-hhhCCCCCceEeCCCCCCC
Q 014285 239 -QAIHAVH--PHCSFILDAN---------E-----------------GYTSEEAVEVLGK-LNDMGVIPVLFEQPVHRDD 288 (427)
Q Consensus 239 -~~ir~~~--~~~~L~vDAN---------~-----------------~~s~~~A~~~l~~-L~~~~l~~~~iEqP~~~~d 288 (427)
++|.+++ +++.|.+|+- + .+|++|++++.+. +++|++ .|||||++++|
T Consensus 231 ~~Ai~~aGy~~~i~i~lD~Aasefy~~~~g~Y~l~f~~~~~~~~~~~~~t~~elid~y~~lle~ypI--~~IEDPl~~dD 308 (441)
T 3qtp_A 231 VEAIAKAGYTGKIEIAMDCAASEFYNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPI--ASIEDPFAEDD 308 (441)
T ss_dssp HHHHHHHTCTTTCEEEEECCGGGGEETTTTEEETTTTSCGGGCCGGGEECHHHHHHHHHHHHHHSCE--EEEESCSCTTC
T ss_pred HHHHHHcCCCceEEEccchhHHHhhhccCCeEEeecCCcccccccccccCHHHHHHHHHHHhhhcce--eeecCCCChHH
Confidence 4666665 6899999983 1 2578999999887 688986 69999999999
Q ss_pred hhhHHHHHHhhccccC-CeEEecCC-CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEccc-Cc
Q 014285 289 WSGLHDVSNFARDTYG-ISVVADES-CRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGM-IE 364 (427)
Q Consensus 289 ~~~~~~L~~~~r~~~~-iPIa~dE~-~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~-~e 364 (427)
|+++++|++ +++ +||++||. +.++.+++++++.++++++++|++++| +|++++++++|+++|+++|++++ .|
T Consensus 309 ~eg~a~Lt~----~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITEalkaa~lA~~~G~~vmvsHrsgE 384 (441)
T 3qtp_A 309 WAAWNKFTV----EHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGE 384 (441)
T ss_dssp HHHHHHHHH----HTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred HHHHHHHHH----hcCCceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHHHHHHHHHHHHcCCeEEEeCCCCC
Confidence 999999997 564 99999997 678999999999999999999999998 99999999999999999998764 48
Q ss_pred hhHHHHHHHHHHhhcCCc
Q 014285 365 TRLATGFALHLAAGLGCI 382 (427)
Q Consensus 365 s~ig~~a~~hlaaal~~~ 382 (427)
+..+. .++|+.++++.
T Consensus 385 TeDt~--iAdLAVal~~g 400 (441)
T 3qtp_A 385 TEDTF--IADLVVGLNCK 400 (441)
T ss_dssp CSCCH--HHHHHHHTTCE
T ss_pred ccHhH--HHHHHHHhCCC
Confidence 76554 45666666543
No 120
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=99.92 E-value=8.4e-24 Score=212.87 Aligned_cols=279 Identities=23% Similarity=0.306 Sum_probs=199.8
Q ss_pred eeEEEEEEEEcCCceEEEEeecCC----------------CCCc-chHHHHHHHHH-HhhHhcCCCCCCHHHHHHHHHHH
Q 014285 93 VENVAIRVELSNGCVGWGEVAVVP----------------LVTG-DQTKALVKVRE-ACQFLRQSPPTTLNFALDEIARI 154 (427)
Q Consensus 93 ~~~vlV~v~t~~G~~G~GE~~~~~----------------~~s~-~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~l~~~ 154 (427)
.++|-|+|.|++|.. .+-+.... .|.+ ....++..+++ +.|.|+|.++.+...+.+.|.+.
T Consensus 18 npTvEv~v~~~~G~~-ra~vPsGaStG~~Ea~elrD~d~~~y~Gkgv~kAv~~vn~~Iap~Lig~d~~dQ~~iD~~m~~~ 96 (452)
T 3otr_A 18 NPTIEVDVSTEGGVF-RAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALLGKDPCDQKGIDMLMVEQ 96 (452)
T ss_dssp CEEEEEEEEETTEEE-EEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTTCCTTCHHHHHHHHHHT
T ss_pred CEEEEEEEEECCccE-EEeccccCCCCcceEEeecCCCcccccCccHHHHHHHHHHHHHHHHcCCChHhHHHHHHHHHHH
Confidence 578899999998764 33332110 1222 23345566655 78999999999999999988733
Q ss_pred CCC----------ChhhhHHHHHHHHHHHHHHhhCCCChhhhhC---CCC---Cceeeeee-------------------
Q 014285 155 LPG----------SEFASVRAGVEMALIDAVANSIDIPLWRLFG---GAS---NSLSTAIT------------------- 199 (427)
Q Consensus 155 ~~g----------~~~~~a~~aie~Al~Dl~gk~~g~Pl~~Llg---g~~---~~ip~~~~------------------- 199 (427)
+.| ....+++.|+.+|+..+.|...|+|||+++| |.. ..+|+...
T Consensus 97 lDgT~n~~~~~ks~lGaNail~vSlAvakAaA~~~~~PLy~yi~~l~g~~~~~~~lPvP~~nvinGG~ha~n~l~~QEfm 176 (452)
T 3otr_A 97 LDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVINGGEHAGNGLALQEFL 176 (452)
T ss_dssp TTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEEEEECGGGCSSSCCSSEEE
T ss_pred hcCCCCcccccccccCcchhhHHHHHHHHHHHHhcCCcHHHHHHHhcCCCCcceecccceEEEecCcccCCCCCCcCeEE
Confidence 333 2336789999999999999999999999998 433 23454211
Q ss_pred -ec--CCCHHHHHHH-------HHHHhhc--CCcEEEEecc------CCc---hhhHHHH-HHHHHhC--CCcEEEEeCC
Q 014285 200 -IP--AVSPAEASEL-------ASKYCKL--GFSTLKLNVG------RNI---TADFDVL-QAIHAVH--PHCSFILDAN 255 (427)
Q Consensus 200 -i~--~~~~~~~~~~-------~~~~~~~--Gf~~iKlKiG------~~~---~~d~~~l-~~ir~~~--~~~~L~vDAN 255 (427)
+| ..++.+..+. .++.++. |... ..+| +++ ++-++.| ++|.+++ +++.|.+|+-
T Consensus 177 i~P~ga~sf~ealr~g~evyh~Lk~vl~~k~g~~~--t~vgDEGgfap~~~~~~eaL~ll~~Ai~~aGy~~~i~i~lD~A 254 (452)
T 3otr_A 177 IAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDA--TNVGDEGGFAPNVATAEEALNLLVEAIKAAGYEGKIKIAFDAA 254 (452)
T ss_dssp EECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGG--GCBCTTSCBCCCCCSHHHHHHHHHHHHHHHTCTTTSEEEEECC
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCcc--cccccccccCCCCCCHHHHHHHHHHHHHHcCCCceEEEccccc
Confidence 12 1245443221 2222221 4210 1233 233 3445554 4666665 5899999872
Q ss_pred C------------------------CCCHHHHHHHHHH-hhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC--CeEE
Q 014285 256 E------------------------GYTSEEAVEVLGK-LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG--ISVV 308 (427)
Q Consensus 256 ~------------------------~~s~~~A~~~l~~-L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~--iPIa 308 (427)
. .+|++|++++++. +++|++ .|||||++++||+++++|++ +++ +||+
T Consensus 255 asefy~~~~g~Y~l~fk~~~~~~~~~~t~~Elid~y~~lle~ypI--v~IEDPl~~dD~eg~a~Lt~----~lg~~iqIv 328 (452)
T 3otr_A 255 ASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPI--ISVEDPFDQDDFASFSAFTK----DVGEKTQVI 328 (452)
T ss_dssp GGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCE--EEEECCSCTTCHHHHHHHHH----HHTTTSEEE
T ss_pred hHhheeccCCeEEeeccCCCCcccccccHHHHHHHHHHHHhhhCc--eEEecCCChhhHHHHHHHHH----hhCCCeEEE
Confidence 1 2578999999977 688986 69999999999999999987 455 9999
Q ss_pred ecCC-CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC-chhHHHHHHHHHHhhcCCc
Q 014285 309 ADES-CRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI-ETRLATGFALHLAAGLGCI 382 (427)
Q Consensus 309 ~dE~-~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~-es~ig~~a~~hlaaal~~~ 382 (427)
+||. ++++.+++++++.++++++++|++++| +|++++++++|+++|+++|+++.. |+.-. ..++||.+++++
T Consensus 329 GDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgITEalka~~lA~~~G~~vmvshrSGETeD~--~iAdLaVgl~~g 403 (452)
T 3otr_A 329 GDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQVSHRSGETEDS--FIADLVVGLRCG 403 (452)
T ss_dssp ESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCC--HHHHHHHHTTCC
T ss_pred eCccccCCHHHHHHHHhcCCCCEEEeeccccccHHHHHHHHHHHHHcCCeEEEeCCCCCCchh--HHHHHHHHcCCC
Confidence 9997 678999999999999999999999998 999999999999999999998743 66433 466888877664
No 121
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.27 E-value=1.6e-05 Score=78.70 Aligned_cols=120 Identities=18% Similarity=0.250 Sum_probs=91.7
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHHh-CCC--cEEEEeCC----C
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHAV-HPH--CSFILDAN----E 256 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~~-~~~--~~L~vDAN----~ 256 (427)
.+.++..++.||..|.+..+. +++. -++.+++||+. +++ +-+++.++ +
T Consensus 155 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~ 234 (349)
T 3hgj_A 155 VEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEG 234 (349)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTT
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCC
Confidence 445666778999999999863 1121 26678999984 666 56677776 4
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeCCC------------CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHH
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPV------------HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQ 324 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEqP~------------~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~ 324 (427)
+|+.+++.++++.|++.++. ||+-.. +..+++..+++++ .+++||.....+.+.++.+++++
T Consensus 235 g~~~~~~~~la~~L~~~Gvd--~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~----~~~iPVi~~Ggi~t~e~a~~~l~ 308 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKELGVD--LLDCSSGGVVLRVRIPLAPGFQVPFADAVRK----RVGLRTGAVGLITTPEQAETLLQ 308 (349)
T ss_dssp SCCHHHHHHHHHHHHHTTCC--EEEEECCCSCSSSCCCCCTTTTHHHHHHHHH----HHCCEEEECSSCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCC--EEEEecCCcCcccccCCCccccHHHHHHHHH----HcCceEEEECCCCCHHHHHHHHH
Confidence 89999999999999999974 888653 1124444555654 57899999999999999999999
Q ss_pred cCCCcEEEeC
Q 014285 325 ENLASVVNIK 334 (427)
Q Consensus 325 ~~a~~~i~lk 334 (427)
.+.+|.|.+=
T Consensus 309 ~G~aD~V~iG 318 (349)
T 3hgj_A 309 AGSADLVLLG 318 (349)
T ss_dssp TTSCSEEEES
T ss_pred CCCceEEEec
Confidence 9989998763
No 122
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.17 E-value=4.4e-05 Score=75.18 Aligned_cols=122 Identities=13% Similarity=0.160 Sum_probs=91.6
Q ss_pred HHHHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHHhC-CCcEEEEeC----CC
Q 014285 207 EASELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHAVH-PHCSFILDA----NE 256 (427)
Q Consensus 207 ~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~~~-~~~~L~vDA----N~ 256 (427)
++.+.++..+++||..|+++.+. +++. -++.+++||+.. ..+.+++.+ ++
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~ 224 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDK 224 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTT
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCC
Confidence 34555677788999999999862 1111 267889999853 235555555 56
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEe--------C--CCCC-CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFE--------Q--PVHR-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE 325 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iE--------q--P~~~-~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~ 325 (427)
+|+.+++.++++.|++.++. ||+ + |..+ .+++..+++++ .+++||.....+.+.+++.++++.
T Consensus 225 g~~~~~~~~~a~~l~~~Gvd--~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~----~~~iPVi~~Ggi~s~~~a~~~l~~ 298 (338)
T 1z41_A 225 GLDIADHIGFAKWMKEQGVD--LIDCSSGALVHADINVFPGYQVSFAEKIRE----QADMATGAVGMITDGSMAEEILQN 298 (338)
T ss_dssp SCCHHHHHHHHHHHHHTTCC--EEEEECCCSSCCCCCCCTTTTHHHHHHHHH----HHCCEEEECSSCCSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCC--EEEEecCccccCCCCCCccchHHHHHHHHH----HCCCCEEEECCCCCHHHHHHHHHc
Confidence 89999999999999999975 787 3 3333 24566666764 578999999999999999999999
Q ss_pred CCCcEEEeC
Q 014285 326 NLASVVNIK 334 (427)
Q Consensus 326 ~a~~~i~lk 334 (427)
+.+|.|.+-
T Consensus 299 G~aD~V~iG 307 (338)
T 1z41_A 299 GRADLIFIG 307 (338)
T ss_dssp TSCSEEEEC
T ss_pred CCceEEeec
Confidence 989998763
No 123
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.03 E-value=5.2e-05 Score=81.37 Aligned_cols=121 Identities=12% Similarity=0.169 Sum_probs=90.2
Q ss_pred HHHHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHH-hCCCcEE--EEeC----
Q 014285 207 EASELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHA-VHPHCSF--ILDA---- 254 (427)
Q Consensus 207 ~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~-~~~~~~L--~vDA---- 254 (427)
++.+.++..+++||..++++.+. +++. -++.+++||+ +++++.+ ++.+
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 44556777788999999998752 1222 3677899998 5777554 4444
Q ss_pred CCCCCHHHHHHHHHHhhhCCCCCceEe-------CCCCC--------CChhhHHHHHHhhccccCCeEEecCCCCCHHHH
Q 014285 255 NEGYTSEEAVEVLGKLNDMGVIPVLFE-------QPVHR--------DDWSGLHDVSNFARDTYGISVVADESCRSLNDV 319 (427)
Q Consensus 255 N~~~s~~~A~~~l~~L~~~~l~~~~iE-------qP~~~--------~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~ 319 (427)
+++|+.+++.++++.|++.++. ||+ ++.+. ..++..++++ +.+++||+....+.+.+++
T Consensus 222 ~~g~~~~~~~~~a~~l~~~g~d--~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~iPvi~~Ggi~~~~~a 295 (671)
T 1ps9_A 222 EDGGTFAETVELAQAIEAAGAT--IINTGIGWHEARIPTIATPVPRGAFSWVTRKLK----GHVSLPLVTTNRINDPQVA 295 (671)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCS--EEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHT----TSCSSCEEECSSCCSHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCC--EEEcCCCccccccccccccCCcchHHHHHHHHH----HhcCceEEEeCCCCCHHHH
Confidence 4689999999999999999874 884 43331 1234444554 4789999999999999999
Q ss_pred HHHHHcCCCcEEEe
Q 014285 320 QKVMQENLASVVNI 333 (427)
Q Consensus 320 ~~ll~~~a~~~i~l 333 (427)
.++++.+.+|.|.+
T Consensus 296 ~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 296 DDILSRGDADMVSM 309 (671)
T ss_dssp HHHHHTTSCSEEEE
T ss_pred HHHHHcCCCCEEEe
Confidence 99999998999875
No 124
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.02 E-value=5.5e-05 Score=75.62 Aligned_cols=119 Identities=12% Similarity=0.143 Sum_probs=89.2
Q ss_pred HHHHHHHHh-hcCCcEEEEeccC-----------------------Cchh----hHHHHHHHHH-hCCC-cEEEEeCC--
Q 014285 208 ASELASKYC-KLGFSTLKLNVGR-----------------------NITA----DFDVLQAIHA-VHPH-CSFILDAN-- 255 (427)
Q Consensus 208 ~~~~~~~~~-~~Gf~~iKlKiG~-----------------------~~~~----d~~~l~~ir~-~~~~-~~L~vDAN-- 255 (427)
+.+.++.++ ++||..|+++.+. +++. -++.+++||+ ++++ +-+++.++
T Consensus 176 f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~ 255 (379)
T 3aty_A 176 FVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNG 255 (379)
T ss_dssp HHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccc
Confidence 345566778 8999999998752 1221 2566899998 4654 66666664
Q ss_pred -----CCCCHHHHHHHHHHhhhCCCCCceEeCCCCC-----CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc
Q 014285 256 -----EGYTSEEAVEVLGKLNDMGVIPVLFEQPVHR-----DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE 325 (427)
Q Consensus 256 -----~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~-----~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~ 325 (427)
++|+.+++.++++.|+++++. |||.+... ...+ .++++ +.+++||++.+.+ +.+++.++++.
T Consensus 256 ~~~~~~~~~~~~~~~la~~l~~~Gvd--~i~v~~~~~~~~~~~~~-~~~ir----~~~~iPvi~~G~i-t~~~a~~~l~~ 327 (379)
T 3aty_A 256 VHGMIDSNPEALTKHLCKKIEPLSLA--YLHYLRGDMVNQQIGDV-VAWVR----GSYSGVKISNLRY-DFEEADQQIRE 327 (379)
T ss_dssp GGGCCCSCHHHHHHHHHHHHGGGCCS--EEEEECSCTTSCCCCCH-HHHHH----TTCCSCEEEESSC-CHHHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHHHHHHHhCCC--EEEEcCCCcCCCCccHH-HHHHH----HHCCCcEEEECCC-CHHHHHHHHHc
Confidence 478899999999999999974 99987631 1123 55555 4688999999998 99999999999
Q ss_pred CCCcEEEeC
Q 014285 326 NLASVVNIK 334 (427)
Q Consensus 326 ~a~~~i~lk 334 (427)
+.+|+|.+=
T Consensus 328 g~aD~V~ig 336 (379)
T 3aty_A 328 GKVDAVAFG 336 (379)
T ss_dssp TSCSEEEES
T ss_pred CCCeEEEec
Confidence 999998763
No 125
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=97.97 E-value=4.1e-05 Score=76.45 Aligned_cols=121 Identities=12% Similarity=0.185 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHH-hCCC-cEEEEeCC---
Q 014285 206 AEASELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHA-VHPH-CSFILDAN--- 255 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~-~~~~-~~L~vDAN--- 255 (427)
+++.+.++..+++||..|++..+. +++. -++.+++||+ ++++ +.+++-++
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~ 246 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHY 246 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 445566777788999999999862 1222 3667899998 5654 44555433
Q ss_pred ----CCCCHHHHHHHHHHhhhCCCCCceEeCCCCC--------CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHH
Q 014285 256 ----EGYTSEEAVEVLGKLNDMGVIPVLFEQPVHR--------DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVM 323 (427)
Q Consensus 256 ----~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~--------~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll 323 (427)
+.++.+++.++++.|+++++. |||-+... .+++..+++++ ..++||++...+ +.+++++++
T Consensus 247 ~g~~~~~~~~~~~~la~~le~~Gvd--~i~v~~~~~~~~~~~~~~~~~~~~vr~----~~~iPvi~~G~i-~~~~a~~~l 319 (376)
T 1icp_A 247 NEAGDTNPTALGLYMVESLNKYDLA--YCHVVEPRMKTAWEKIECTESLVPMRK----AYKGTFIVAGGY-DREDGNRAL 319 (376)
T ss_dssp TTCCCSCHHHHHHHHHHHHGGGCCS--EEEEECCSCCC------CCCCSHHHHH----HCCSCEEEESSC-CHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCC--EEEEcCCcccCCCCccccHHHHHHHHH----HcCCCEEEeCCC-CHHHHHHHH
Confidence 346788899999999999974 88875431 23444556654 678999999998 899999999
Q ss_pred HcCCCcEEEe
Q 014285 324 QENLASVVNI 333 (427)
Q Consensus 324 ~~~a~~~i~l 333 (427)
+.+.+|+|.+
T Consensus 320 ~~g~aD~V~~ 329 (376)
T 1icp_A 320 IEDRADLVAY 329 (376)
T ss_dssp HTTSCSEEEE
T ss_pred HCCCCcEEee
Confidence 9999999876
No 126
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=97.93 E-value=8.8e-05 Score=73.74 Aligned_cols=121 Identities=9% Similarity=0.166 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhhcCCcEEEEeccC---------------------Cch----hhHHHHHHHHHh-CCC-cEEEEeCC---
Q 014285 206 AEASELASKYCKLGFSTLKLNVGR---------------------NIT----ADFDVLQAIHAV-HPH-CSFILDAN--- 255 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~----~d~~~l~~ir~~-~~~-~~L~vDAN--- 255 (427)
+++.+.++..+++||..|++..+. +++ --++.+++||+. +++ +.+++-++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 445566777788999999998752 111 235678999985 554 44555444
Q ss_pred -----CCCCHHHHHHHHHHhhhCCCCCceEeCCCC------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHH
Q 014285 256 -----EGYTSEEAVEVLGKLNDMGVIPVLFEQPVH------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQ 324 (427)
Q Consensus 256 -----~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~ 324 (427)
+.++.+++.++++.|++.++. ||+-... ..+++..+++++ .+++||++...+ +.+++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d--~i~v~~~~~~~~~~~~~~~~~~v~~----~~~iPvi~~Ggi-t~~~a~~~l~ 313 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIA--YLHMSETDLAGGKPYSEAFRQKVRE----RFHGVIIGAGAY-TAEKAEDLIG 313 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCS--EEEEECCBTTBCCCCCHHHHHHHHH----HCCSEEEEESSC-CHHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCC--EEEEecCcccCCCcccHHHHHHHHH----HCCCCEEEECCc-CHHHHHHHHH
Confidence 356888999999999999974 8887652 234555566654 688999999998 8999999999
Q ss_pred cCCCcEEEe
Q 014285 325 ENLASVVNI 333 (427)
Q Consensus 325 ~~a~~~i~l 333 (427)
.+.+|.|.+
T Consensus 314 ~g~aD~V~~ 322 (364)
T 1vyr_A 314 KGLIDAVAF 322 (364)
T ss_dssp TTSCSEEEE
T ss_pred CCCccEEEE
Confidence 998998776
No 127
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=97.83 E-value=0.0003 Score=69.27 Aligned_cols=118 Identities=14% Similarity=0.189 Sum_probs=86.7
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHHh-CCC--cEEEEeCC----C
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHAV-HPH--CSFILDAN----E 256 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~~-~~~--~~L~vDAN----~ 256 (427)
.+.++..++.||..|.+..+. +++. -++.+++||+. +++ +.+++-++ +
T Consensus 146 ~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~ 225 (343)
T 3kru_A 146 GEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEG 225 (343)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTT
T ss_pred HHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhcc
Confidence 344666778999999999431 1222 26788999994 666 45555554 4
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeCC----------CCC-CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQP----------VHR-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE 325 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEqP----------~~~-~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~ 325 (427)
+|+.+++.++++.|++. +. ||+-. ..+ .+++..+++++ ..++||.+...+.+.++.+++++.
T Consensus 226 g~~~~~~~~~a~~l~~~-vd--~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~----~~~iPVi~~Ggi~t~e~Ae~~l~~ 298 (343)
T 3kru_A 226 GINIDMMVEYINMIKDK-VD--LIDVSSGGLLNVDINLYPGYQVKYAETIKK----RCNIKTSAVGLITTQELAEEILSN 298 (343)
T ss_dssp SCCHHHHHHHHHHHTTT-CS--EEEEECCCSSCCCCCCCTTTTHHHHHHHHH----HHTCEEEEESSCCCHHHHHHHHHT
T ss_pred CccHHHHHHHHHHhhcc-cc--EEeccCCceEeeeecccCceeehHHHHHHH----hcCcccceeeeeeHHHHHHHHHhc
Confidence 78999999999999998 74 78763 112 23444455554 678999999999999999999999
Q ss_pred CCCcEEEe
Q 014285 326 NLASVVNI 333 (427)
Q Consensus 326 ~a~~~i~l 333 (427)
+.+|.|.+
T Consensus 299 G~aD~V~i 306 (343)
T 3kru_A 299 ERADLVAL 306 (343)
T ss_dssp TSCSEEEE
T ss_pred hhhHHHHH
Confidence 98998775
No 128
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.74 E-value=0.00011 Score=73.09 Aligned_cols=119 Identities=17% Similarity=0.167 Sum_probs=87.2
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHHh-CCC--cEEEEeCCC----
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHAV-HPH--CSFILDANE---- 256 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~~-~~~--~~L~vDAN~---- 256 (427)
.+.++..++.||..|.++.+. +++. -++.+++||+. +++ +-+++.++.
T Consensus 161 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~ 240 (363)
T 3l5l_A 161 VDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGR 240 (363)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSC
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCC
Confidence 344666778999999999752 1222 25678999984 666 455555542
Q ss_pred C-CCHHHHHHHHHHhhhCCCCCceEeCCC-----------CC-CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHH
Q 014285 257 G-YTSEEAVEVLGKLNDMGVIPVLFEQPV-----------HR-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVM 323 (427)
Q Consensus 257 ~-~s~~~A~~~l~~L~~~~l~~~~iEqP~-----------~~-~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll 323 (427)
+ |+.+++.++++.|++.++. ||+-.. .+ .+++..+++++ .+++||.....+.+.++.++++
T Consensus 241 G~~~~~~~~~la~~L~~~Gvd--~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~----~~~iPVi~~GgI~s~e~a~~~l 314 (363)
T 3l5l_A 241 DEQTLEESIELARRFKAGGLD--LLSVSVGFTIPDTNIPWGPAFMGPIAERVRR----EAKLPVTSAWGFGTPQLAEAAL 314 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC--EEEEEECCCSSCCCCCCCTTTTHHHHHHHHH----HHTCCEEECSSTTSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCC--EEEEecCccccccccCCCcchhHHHHHHHHH----HcCCcEEEeCCCCCHHHHHHHH
Confidence 4 8899999999999999975 887432 11 23444455554 5789999999999999999999
Q ss_pred HcCCCcEEEe
Q 014285 324 QENLASVVNI 333 (427)
Q Consensus 324 ~~~a~~~i~l 333 (427)
+.+.+|.|.+
T Consensus 315 ~~G~aD~V~i 324 (363)
T 3l5l_A 315 QANQLDLVSV 324 (363)
T ss_dssp HTTSCSEEEC
T ss_pred HCCCccEEEe
Confidence 9998998775
No 129
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=97.55 E-value=0.00093 Score=66.65 Aligned_cols=121 Identities=13% Similarity=0.179 Sum_probs=87.7
Q ss_pred HHHHHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHH-hCCC-cEEEEeCC---
Q 014285 206 AEASELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHA-VHPH-CSFILDAN--- 255 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~-~~~~-~~L~vDAN--- 255 (427)
+++.+.|+..+++||..|+|..+. +++. -++.+++||+ ++++ +.+++-++
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~ 245 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 344556667778999999998752 1222 3567899998 4654 55565443
Q ss_pred ----CCCCHHHHHHHHHHhhhCCCCCceEeCCCC------C-CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHH
Q 014285 256 ----EGYTSEEAVEVLGKLNDMGVIPVLFEQPVH------R-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQ 324 (427)
Q Consensus 256 ----~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~------~-~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~ 324 (427)
++|+.+++.++++.|++.++. ||+-.-. . .+++..+++++ ..++||.+...+ +.++..++++
T Consensus 246 ~~~~~~~~~~~~~~la~~le~~Gvd--~i~v~~~~~~~~~~~~~~~~~~~ik~----~~~iPvi~~Ggi-~~~~a~~~l~ 318 (377)
T 2r14_A 246 FGLTDDEPEAMAFYLAGELDRRGLA--YLHFNEPDWIGGDITYPEGFREQMRQ----RFKGGLIYCGNY-DAGRAQARLD 318 (377)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHTTCS--EEEEECCC------CCCTTHHHHHHH----HCCSEEEEESSC-CHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCC--EEEEeCCcccCCCCcchHHHHHHHHH----HCCCCEEEECCC-CHHHHHHHHH
Confidence 467899999999999999874 7775321 1 14455566654 678999998888 6999999999
Q ss_pred cCCCcEEEe
Q 014285 325 ENLASVVNI 333 (427)
Q Consensus 325 ~~a~~~i~l 333 (427)
.+.+|.|.+
T Consensus 319 ~g~aD~V~i 327 (377)
T 2r14_A 319 DNTADAVAF 327 (377)
T ss_dssp TTSCSEEEE
T ss_pred CCCceEEee
Confidence 998998776
No 130
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=97.46 E-value=0.0016 Score=64.66 Aligned_cols=122 Identities=11% Similarity=0.135 Sum_probs=87.6
Q ss_pred HHHHHHHHHHhhcCCcEEEEeccC---------------------Cch----hhHHHHHHHHH-hCCC-cEEEEeCC---
Q 014285 206 AEASELASKYCKLGFSTLKLNVGR---------------------NIT----ADFDVLQAIHA-VHPH-CSFILDAN--- 255 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~----~d~~~l~~ir~-~~~~-~~L~vDAN--- 255 (427)
+++.+.++..++.||..|+|..+. +++ --++.+++||+ ++++ +-+++-++
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~ 240 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEcccccc
Confidence 344555666778999999998752 111 23567899998 4654 55555553
Q ss_pred ----CCCCHHHHHHHHHHhhhCCCCCceEeCCCC------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc
Q 014285 256 ----EGYTSEEAVEVLGKLNDMGVIPVLFEQPVH------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE 325 (427)
Q Consensus 256 ----~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~ 325 (427)
++++.+++.++++.|++.++. ||+-.-. ...++..+++++ .+++||.+...+ +.++..++++.
T Consensus 241 ~~~~~~~~~~~~~~~a~~l~~~G~d--~i~v~~~~~~~~~~~~~~~~~~i~~----~~~iPvi~~Ggi-~~~~a~~~l~~ 313 (365)
T 2gou_A 241 NGTVDADPILTYTAAAALLNKHRIV--YLHIAEVDWDDAPDTPVSFKRALRE----AYQGVLIYAGRY-NAEKAEQAIND 313 (365)
T ss_dssp TSCCCSSHHHHHHHHHHHHHHTTCS--EEEEECCBTTBCCCCCHHHHHHHHH----HCCSEEEEESSC-CHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCC--EEEEeCCCcCCCCCccHHHHHHHHH----HCCCcEEEeCCC-CHHHHHHHHHC
Confidence 457889999999999999874 7875432 113444455554 678999999888 89999999999
Q ss_pred CCCcEEEeC
Q 014285 326 NLASVVNIK 334 (427)
Q Consensus 326 ~a~~~i~lk 334 (427)
+.+|.|.+=
T Consensus 314 g~aD~V~ig 322 (365)
T 2gou_A 314 GLADMIGFG 322 (365)
T ss_dssp TSCSEEECC
T ss_pred CCcceehhc
Confidence 989988763
No 131
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=97.32 E-value=0.0028 Score=62.22 Aligned_cols=119 Identities=16% Similarity=0.159 Sum_probs=87.3
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cchhh----HHHHHHHHHhC-CCcEEEEeCC----CCC
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NITAD----FDVLQAIHAVH-PHCSFILDAN----EGY 258 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~d----~~~l~~ir~~~-~~~~L~vDAN----~~~ 258 (427)
.+.++..++.||..|.+..+. +++.. ++.+++||+.- .-+.+++-++ ++|
T Consensus 147 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~ 226 (340)
T 3gr7_A 147 QNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGL 226 (340)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSC
T ss_pred HHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 345666678899999999872 12222 56788999853 2366677665 578
Q ss_pred CHHHHHHHHHHhhhCCCCCceEeC--------CC--CC-CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCC
Q 014285 259 TSEEAVEVLGKLNDMGVIPVLFEQ--------PV--HR-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~~~iEq--------P~--~~-~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a 327 (427)
+.+++.++++.|++.++. ||+- +. .+ .+++..+++++ ..++||...-.+.+.++.+++++.+.
T Consensus 227 ~~~~~~~la~~L~~~Gvd--~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~----~~~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVD--LVDVSSGAIVPARMNVYPGYQVPFAELIRR----EADIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp CGGGHHHHHHHHHHTTCC--EEEEECCCSSCCCCCCCTTTTHHHHHHHHH----HTTCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEecCCccCCCCCCCccccHHHHHHHHH----HcCCcEEeeCCCCCHHHHHHHHHCCC
Confidence 999999999999999874 6653 11 11 23444455554 67899999999999999999999998
Q ss_pred CcEEEe
Q 014285 328 ASVVNI 333 (427)
Q Consensus 328 ~~~i~l 333 (427)
+|.|.+
T Consensus 301 aD~V~i 306 (340)
T 3gr7_A 301 ADLVFL 306 (340)
T ss_dssp CSEEEE
T ss_pred eeEEEe
Confidence 998876
No 132
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.26 E-value=0.0029 Score=62.64 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=84.9
Q ss_pred HHHHHHHHhhcCCcEEEEeccC------------C---------ch----hhHHHHHHHHH-hCCC-cEEEEeCCC----
Q 014285 208 ASELASKYCKLGFSTLKLNVGR------------N---------IT----ADFDVLQAIHA-VHPH-CSFILDANE---- 256 (427)
Q Consensus 208 ~~~~~~~~~~~Gf~~iKlKiG~------------~---------~~----~d~~~l~~ir~-~~~~-~~L~vDAN~---- 256 (427)
+.+.++..++.||..|+|..+. + ++ --++.+++||+ ++++ +.+|+-++.
T Consensus 163 f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g 242 (361)
T 3gka_A 163 FRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHT 242 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSS
T ss_pred HHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCC
Confidence 3455677788999999999863 1 11 12678899998 4654 566666642
Q ss_pred ---CCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 257 ---GYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 257 ---~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
.++.+++.++++.|++.++. ||+-.-.....+..+++++ ..++||.....+ +.++.+++++.+.+|.|.+
T Consensus 243 ~~~~~~~~~~~~la~~l~~~Gvd--~i~v~~~~~~~~~~~~ik~----~~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 243 MGDSDPAATFGHVARELGRRRIA--FLFARESFGGDAIGQQLKA----AFGGPFIVNENF-TLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCS--EEEEECCCSTTCCHHHHHH----HHCSCEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHcCCC--EEEECCCCCCHHHHHHHHH----HcCCCEEEeCCC-CHHHHHHHHHcCCccEEEE
Confidence 23467899999999999974 8886554311122344543 578899888887 9999999999998998765
No 133
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=97.16 E-value=0.0043 Score=61.46 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=83.0
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHH-hCCC-cEEEEeCCCC----
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHA-VHPH-CSFILDANEG---- 257 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~-~~~~-~~L~vDAN~~---- 257 (427)
.+.++..++.||..|.|..+. +++. -++.+++||+ ++++ +.+++-++..
T Consensus 156 ~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~ 235 (362)
T 4ab4_A 156 RSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDM 235 (362)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSC
T ss_pred HHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccccccc
Confidence 345666778999999999863 1121 2567899998 4654 5566655432
Q ss_pred ---CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 258 ---YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 258 ---~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
++.+++.++++.|++.++. ||+-.-.....+..+++++ ..++||.....+ +.++.+++++.+.+|.|.+
T Consensus 236 ~~~~~~~~~~~la~~l~~~Gvd--~i~v~~~~~~~~~~~~ik~----~~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 236 GDADRAETFTYVARELGKRGIA--FICSREREADDSIGPLIKE----AFGGPYIVNERF-DKASANAALASGKADAVAF 307 (362)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCS--EEEEECCCCTTCCHHHHHH----HHCSCEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred CCCCcHHHHHHHHHHHHHhCCC--EEEECCCCCCHHHHHHHHH----HCCCCEEEeCCC-CHHHHHHHHHcCCccEEEE
Confidence 3367899999999999974 8886543211122344543 568899888777 9999999999998998765
No 134
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.08 E-value=0.004 Score=62.53 Aligned_cols=122 Identities=10% Similarity=0.154 Sum_probs=83.6
Q ss_pred HHHHHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHH-hCCC-cEEEEeCC---
Q 014285 206 AEASELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHA-VHPH-CSFILDAN--- 255 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~-~~~~-~~L~vDAN--- 255 (427)
+++.+.|+..+++||..|.|..+. +++. -++.+++||+ ++++ +.+++-++
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~ 250 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDH 250 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecccccc
Confidence 344556777788999999999862 1222 3567889998 4643 44444332
Q ss_pred ----CCCCHHHHHHHHHHhhhCC------CCCceEeC--------CCCC--------CChhhHHHHHHhhccccCCeEEe
Q 014285 256 ----EGYTSEEAVEVLGKLNDMG------VIPVLFEQ--------PVHR--------DDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 256 ----~~~s~~~A~~~l~~L~~~~------l~~~~iEq--------P~~~--------~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
++++.+++.++++.|++.+ +. ||+- +..+ .+++..++++ +..++||..
T Consensus 251 ~g~~~~~~~~~~~~la~~le~~G~~gg~~vd--~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk----~~~~iPvi~ 324 (402)
T 2hsa_B 251 LDAMDSNPLSLGLAVVERLNKIQLHSGSKLA--YLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLR----NAYQGTFIC 324 (402)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHTSCCS--EEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHH----HHCSSCEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCccCCceE--EEEEecCccccccCCccccccCCcchHHHHHHHH----HHCCCCEEE
Confidence 4567889999999999888 64 5553 1111 1122233343 468899999
Q ss_pred cCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 310 DESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 310 dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
...+ +.++.+++++.+.+|.|.+=
T Consensus 325 ~G~i-~~~~a~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 325 SGGY-TRELGIEAVAQGDADLVSYG 348 (402)
T ss_dssp ESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred eCCC-CHHHHHHHHHCCCCceeeec
Confidence 8888 99999999999999998763
No 135
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=96.29 E-value=0.038 Score=53.50 Aligned_cols=134 Identities=18% Similarity=0.237 Sum_probs=95.3
Q ss_pred ceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCC----------------chhhHHHHHHHHHhCCCcEEEEeCCC
Q 014285 193 SLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRN----------------ITADFDVLQAIHAVHPHCSFILDANE 256 (427)
Q Consensus 193 ~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~----------------~~~d~~~l~~ir~~~~~~~L~vDAN~ 256 (427)
..|+...+...+++++.+.++...+. |..|-+..|.+ ++.-.+.++++|+..+ +.+.|..+.
T Consensus 58 ~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~ 135 (318)
T 1vhn_A 58 ERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS-GKFSVKTRL 135 (318)
T ss_dssp CTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS-SEEEEEEES
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC-CCEEEEecC
Confidence 34555566666789998888888888 99999998731 2334566788888533 566666666
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceE-------eCCC-CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCC
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLF-------EQPV-HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLA 328 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~i-------EqP~-~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~ 328 (427)
+|+.++..++++.+++.++. +| ++-. .+.+|+..++++ + ++||.++-.+.+..++.++++...+
T Consensus 136 G~~~~~~~~~a~~l~~~G~d--~i~v~g~~~~~~~~~~~~~~~i~~i~-----~-~ipVi~~GgI~s~~da~~~l~~~ga 207 (318)
T 1vhn_A 136 GWEKNEVEEIYRILVEEGVD--EVFIHTRTVVQSFTGRAEWKALSVLE-----K-RIPTFVSGDIFTPEDAKRALEESGC 207 (318)
T ss_dssp CSSSCCHHHHHHHHHHTTCC--EEEEESSCTTTTTSSCCCGGGGGGSC-----C-SSCEEEESSCCSHHHHHHHHHHHCC
T ss_pred CCChHHHHHHHHHHHHhCCC--EEEEcCCCccccCCCCcCHHHHHHHH-----c-CCeEEEECCcCCHHHHHHHHHcCCC
Confidence 88776666889999998875 44 2321 223565455443 3 8999999999999999999986568
Q ss_pred cEEEeCCC
Q 014285 329 SVVNIKLA 336 (427)
Q Consensus 329 ~~i~lk~~ 336 (427)
|.|++=-.
T Consensus 208 d~V~iGR~ 215 (318)
T 1vhn_A 208 DGLLVARG 215 (318)
T ss_dssp SEEEESGG
T ss_pred CEEEECHH
Confidence 88887443
No 136
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.03 E-value=0.14 Score=54.77 Aligned_cols=122 Identities=10% Similarity=0.099 Sum_probs=83.7
Q ss_pred HHHHHHHHHhhcCCcEEEEeccC----------------------Cch----hhHHHHHHHHH-hCCC--cEEEEeCC--
Q 014285 207 EASELASKYCKLGFSTLKLNVGR----------------------NIT----ADFDVLQAIHA-VHPH--CSFILDAN-- 255 (427)
Q Consensus 207 ~~~~~~~~~~~~Gf~~iKlKiG~----------------------~~~----~d~~~l~~ir~-~~~~--~~L~vDAN-- 255 (427)
++.+.|+..++.||..|-+..+. +++ --++.+++||+ ++++ +.+|+-++
T Consensus 157 ~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~ 236 (690)
T 3k30_A 157 WHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEE 236 (690)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcccc
Confidence 34455666778999999997642 222 23567899998 5766 56677554
Q ss_pred --CCCCHHHHHHHHHHhhhCCCCCceEe-------C----CC-CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHH
Q 014285 256 --EGYTSEEAVEVLGKLNDMGVIPVLFE-------Q----PV-HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQK 321 (427)
Q Consensus 256 --~~~s~~~A~~~l~~L~~~~l~~~~iE-------q----P~-~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ 321 (427)
++|+.+++.++++.|++ ++. +++ + |. .+..+ ...+.+.+++..++||..--.+.+.++..+
T Consensus 237 ~~~g~~~~~~~~~~~~l~~-~~d--~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~ 311 (690)
T 3k30_A 237 IDGGITREDIEGVLRELGE-LPD--LWDFAMGSWEGDSVTSRFAPEGR--QEEFVAGLKKLTTKPVVGVGRFTSPDAMVR 311 (690)
T ss_dssp STTSCCHHHHHHHHHHHTT-SSS--EEEEECSCHHHHTCCTTTCCTTT--THHHHTTSGGGCSSCEEECSCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHh-hcC--EEEEecccccccCCCCccCCccc--cHHHHHHHHHHcCCeEEEeCCCCCHHHHHH
Confidence 67899999999999998 332 332 1 11 11111 122333344578999998888899999999
Q ss_pred HHHcCCCcEEEe
Q 014285 322 VMQENLASVVNI 333 (427)
Q Consensus 322 ll~~~a~~~i~l 333 (427)
+++.+.+|.|.+
T Consensus 312 ~l~~g~~d~v~~ 323 (690)
T 3k30_A 312 QIKAGILDLIGA 323 (690)
T ss_dssp HHHTTSCSEEEE
T ss_pred HHHCCCcceEEE
Confidence 999999999875
No 137
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.00 E-value=0.067 Score=51.40 Aligned_cols=133 Identities=14% Similarity=0.144 Sum_probs=89.9
Q ss_pred eeeeeecCCCHHHHHHHHHHHhhcCCc-EEEEeccC-----------CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHH
Q 014285 195 STAITIPAVSPAEASELASKYCKLGFS-TLKLNVGR-----------NITADFDVLQAIHAVHPHCSFILDANEGYTSEE 262 (427)
Q Consensus 195 p~~~~i~~~~~~~~~~~~~~~~~~Gf~-~iKlKiG~-----------~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~ 262 (427)
|+..++...+++++.+.++.+.+.||. .+-+.++. +++.-.+.+++||+.. ++.+.|=-+..|+.++
T Consensus 95 p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~ 173 (311)
T 1jub_A 95 PIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPYFDLVH 173 (311)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCCSHHH
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHH
Confidence 444555556788888889888899999 99998751 3333356677777743 3334443344478888
Q ss_pred HHHHHHHhhhCCCCCceE------------e----CCCCC---------C------ChhhHHHHHHhhcccc--CCeEEe
Q 014285 263 AVEVLGKLNDMGVIPVLF------------E----QPVHR---------D------DWSGLHDVSNFARDTY--GISVVA 309 (427)
Q Consensus 263 A~~~l~~L~~~~l~~~~i------------E----qP~~~---------~------d~~~~~~L~~~~r~~~--~iPIa~ 309 (427)
..++++.+++.++. +| + .|... + .++..++++ +.+ .+||..
T Consensus 174 ~~~~a~~~~~~G~d--~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~----~~~~~~ipvi~ 247 (311)
T 1jub_A 174 FDIMAEILNQFPLT--YVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFY----TRLKPEIQIIG 247 (311)
T ss_dssp HHHHHHHHTTSCCC--EEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHH----TTSCTTSEEEE
T ss_pred HHHHHHHHHHcCCc--EEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHH----HhcCCCCCEEE
Confidence 88999999988864 43 2 11110 1 133344444 356 799999
Q ss_pred cCCCCCHHHHHHHHHcCCCcEEEeCC
Q 014285 310 DESCRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 310 dE~~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
.=-+.+..++.+++..+ +|.+++=-
T Consensus 248 ~GGI~~~~da~~~l~~G-Ad~V~vg~ 272 (311)
T 1jub_A 248 TGGIETGQDAFEHLLCG-ATMLQIGT 272 (311)
T ss_dssp ESSCCSHHHHHHHHHHT-CSEEEECH
T ss_pred ECCCCCHHHHHHHHHcC-CCEEEEch
Confidence 99999999999999876 78888743
No 138
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.78 E-value=0.29 Score=47.97 Aligned_cols=135 Identities=16% Similarity=0.246 Sum_probs=93.5
Q ss_pred ceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCC----------------chhhHHHHHHHHHh-C-C-CcEEEEe
Q 014285 193 SLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRN----------------ITADFDVLQAIHAV-H-P-HCSFILD 253 (427)
Q Consensus 193 ~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~----------------~~~d~~~l~~ir~~-~-~-~~~L~vD 253 (427)
..|+...+...+++.+.+.++...+.||..|-+..|.. ++.-.+.++++++. . | .+++|+.
T Consensus 57 ~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g 136 (350)
T 3b0p_A 57 EHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLG 136 (350)
T ss_dssp GCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecC
Confidence 34555666666888888888888889999999998731 12234566788874 2 3 2344544
Q ss_pred CCCCCCHHHHHHHHHHhhhCCCCCceEeCC-------------CCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHH
Q 014285 254 ANEGYTSEEAVEVLGKLNDMGVIPVLFEQP-------------VHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDV 319 (427)
Q Consensus 254 AN~~~s~~~A~~~l~~L~~~~l~~~~iEqP-------------~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~ 319 (427)
.....+.+++.++++.+++.++...-+..- .++.+|+..+++++ .. ++||...=.+.+..++
T Consensus 137 ~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~----~~~~iPVianGgI~s~eda 212 (350)
T 3b0p_A 137 LEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKG----DFPQLTFVTNGGIRSLEEA 212 (350)
T ss_dssp BTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHH----HCTTSEEEEESSCCSHHHH
T ss_pred cCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHH----hCCCCeEEEECCcCCHHHH
Confidence 444456778899999999887652222211 12336777777765 45 8999998899999999
Q ss_pred HHHHHcCCCcEEEe
Q 014285 320 QKVMQENLASVVNI 333 (427)
Q Consensus 320 ~~ll~~~a~~~i~l 333 (427)
.++++ + +|.|++
T Consensus 213 ~~~l~-G-aD~V~i 224 (350)
T 3b0p_A 213 LFHLK-R-VDGVML 224 (350)
T ss_dssp HHHHT-T-SSEEEE
T ss_pred HHHHh-C-CCEEEE
Confidence 99997 4 888876
No 139
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.23 E-value=0.15 Score=54.89 Aligned_cols=123 Identities=9% Similarity=0.089 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHH-hCCCc--EEEEeC---
Q 014285 206 AEASELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHA-VHPHC--SFILDA--- 254 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~-~~~~~--~L~vDA--- 254 (427)
+++.+.|+..+++||..|.+..+. +++. -++.+++||+ ++++. .+++-+
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~ 228 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTV 228 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccC
Confidence 344455667778999999998753 1121 3567899998 57663 344433
Q ss_pred --CCCCC-HHHHHHHHHHhhhCCCC---Cc------eEeCCCCC-----C-ChhhHHHHHHhhccccCCeEEecCCCCCH
Q 014285 255 --NEGYT-SEEAVEVLGKLNDMGVI---PV------LFEQPVHR-----D-DWSGLHDVSNFARDTYGISVVADESCRSL 316 (427)
Q Consensus 255 --N~~~s-~~~A~~~l~~L~~~~l~---~~------~iEqP~~~-----~-d~~~~~~L~~~~r~~~~iPIa~dE~~~~~ 316 (427)
.++|+ .+++.++++.|++. +. +. |-+...++ . +++..++++ +..++||..--.+.+.
T Consensus 229 ~~~~G~~~~~~~~~~~~~l~~~-~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~~pvi~~G~i~~~ 303 (729)
T 1o94_A 229 YGPGQIEAEVDGQKFVEMADSL-VDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVK----QVSKKPVLGVGRYTDP 303 (729)
T ss_dssp SCTTSCCTTTHHHHHHHHHGGG-CSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHH----TTCSSCEECCSCCCCH
T ss_pred cCCCCCCchHHHHHHHHHHHhh-cCEEEEeeecccccccccCCccccCccccHHHHHHHH----HHCCCEEEEeCCCCCH
Confidence 25788 68899999999873 21 00 11222221 1 233334444 4789999999999999
Q ss_pred HHHHHHHHcCCCcEEEe
Q 014285 317 NDVQKVMQENLASVVNI 333 (427)
Q Consensus 317 ~~~~~ll~~~a~~~i~l 333 (427)
++..++++.+.+|.|.+
T Consensus 304 ~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 304 EKMIEIVTKGYADIIGC 320 (729)
T ss_dssp HHHHHHHHTTSCSBEEE
T ss_pred HHHHHHHHCCCCCEEEe
Confidence 99999999998998874
No 140
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.16 E-value=0.076 Score=51.07 Aligned_cols=133 Identities=15% Similarity=0.103 Sum_probs=90.9
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCc---EEEEeccC-----------CchhhHHHHHHHHHhCCCcEEEEeCCCCCC
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFS---TLKLNVGR-----------NITADFDVLQAIHAVHPHCSFILDANEGYT 259 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~---~iKlKiG~-----------~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s 259 (427)
.|+..++...+++++.+.++.+.+.||. .+-+.++. +++.-.+.+++||+.. ++.+.|-....|+
T Consensus 94 ~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~~~ 172 (314)
T 2e6f_A 94 KPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPYFD 172 (314)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCCCC
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCCCC
Confidence 4555566667888888888888888999 89998761 3333456788888743 3344444455578
Q ss_pred HHHHHHHHHHhhhCC-CCCceEe----------------CCCC---------------CCChhhHHHHHHhhcccc-CCe
Q 014285 260 SEEAVEVLGKLNDMG-VIPVLFE----------------QPVH---------------RDDWSGLHDVSNFARDTY-GIS 306 (427)
Q Consensus 260 ~~~A~~~l~~L~~~~-l~~~~iE----------------qP~~---------------~~d~~~~~~L~~~~r~~~-~iP 306 (427)
.++..++++.+.+.+ +. +|- .|.. +..++..+++++ .. .+|
T Consensus 173 ~~~~~~~a~~~~~aG~~d--~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~----~~~~ip 246 (314)
T 2e6f_A 173 IAHFDTAAAVLNEFPLVK--FVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYR----RCPDKL 246 (314)
T ss_dssp HHHHHHHHHHHHTCTTEE--EEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHH----HCTTSE
T ss_pred HHHHHHHHHHHHhcCCce--EEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHH----hcCCCC
Confidence 889888899998888 53 432 1111 001334444443 56 899
Q ss_pred EEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 307 VVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 307 Ia~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
|...=-+.+..++.+++..+ +|.+++=
T Consensus 247 vi~~GGI~~~~da~~~l~~G-Ad~V~ig 273 (314)
T 2e6f_A 247 VFGCGGVYSGEDAFLHILAG-ASMVQVG 273 (314)
T ss_dssp EEEESSCCSHHHHHHHHHHT-CSSEEEC
T ss_pred EEEECCCCCHHHHHHHHHcC-CCEEEEc
Confidence 99998999999999999887 7777763
No 141
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=95.02 E-value=0.69 Score=44.18 Aligned_cols=105 Identities=17% Similarity=0.094 Sum_probs=76.7
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC----------------CchhhHHHHHHHHHh--CCCcEE--EEeCC-CCCCH
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR----------------NITADFDVLQAIHAV--HPHCSF--ILDAN-EGYTS 260 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~----------------~~~~d~~~l~~ir~~--~~~~~L--~vDAN-~~~s~ 260 (427)
..++.+..+.++++.+.|-..+||--+. +.++-+++|+++++. .++..+ |-|+. .....
T Consensus 90 yg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 169 (295)
T 1s2w_A 90 YGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGL 169 (295)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccH
Confidence 4577777888889989999999997552 122447889999885 455444 77887 66779
Q ss_pred HHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEec
Q 014285 261 EEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVAD 310 (427)
Q Consensus 261 ~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~d 310 (427)
++|++.++++.+.|-...|+|-+++ +.+..+++++.+ ..++|+...
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~~~~--~~~~~~~i~~~~--~~~~P~i~~ 215 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHSKKA--DPSDIEAFMKAW--NNQGPVVIV 215 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSS--SSHHHHHHHHHH--TTCSCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCC--CHHHHHHHHHHc--CCCCCEEEe
Confidence 9999999999999866679997565 346778888632 123787643
No 142
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=94.52 E-value=0.57 Score=47.01 Aligned_cols=117 Identities=15% Similarity=0.252 Sum_probs=78.9
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cc-hh----hHHHHHHHHH-h----CCCc--EEEEeCC
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NI-TA----DFDVLQAIHA-V----HPHC--SFILDAN 255 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~-~~----d~~~l~~ir~-~----~~~~--~L~vDAN 255 (427)
.+.++..+++||..|-|..+. ++ +. -++.+++||+ + ++++ .+|+-+.
T Consensus 173 ~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~ 252 (419)
T 3l5a_A 173 RDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPE 252 (419)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSC
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccc
Confidence 344666778999999999862 12 22 2456788888 4 4554 4454442
Q ss_pred ----C--CCCHHHHHHHHHHhhh-CCCCCceEe------------CCCC-C-CChhhHHHHHHhhcccc--CCeEEecCC
Q 014285 256 ----E--GYTSEEAVEVLGKLND-MGVIPVLFE------------QPVH-R-DDWSGLHDVSNFARDTY--GISVVADES 312 (427)
Q Consensus 256 ----~--~~s~~~A~~~l~~L~~-~~l~~~~iE------------qP~~-~-~d~~~~~~L~~~~r~~~--~iPIa~dE~ 312 (427)
+ +|+.+++.++++.|++ .++. ||+ +|.. + .+++..+.+++ .. .+||.+.=.
T Consensus 253 ~~~~~~~G~~~ed~~~la~~L~~~~Gvd--~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~----~v~~~iPVI~~Gg 326 (419)
T 3l5a_A 253 ETRGSDLGYTIDEFNQLIDWVMDVSNIQ--YLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYE----HLAGRIPLIASGG 326 (419)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHSCCC--CEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHH----HHTTSSCEEECSS
T ss_pred cccCCCCCCCHHHHHHHHHHHHhhcCCc--EEEEeeCCccccccccCCCCccccHHHHHHHHH----HcCCCCeEEEECC
Confidence 3 8999999999999999 7764 443 1211 1 13344455543 34 589988888
Q ss_pred CCCHHHHHHHHHcCCCcEEEe
Q 014285 313 CRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 313 ~~~~~~~~~ll~~~a~~~i~l 333 (427)
+.+.++.+++++. +|.|.+
T Consensus 327 I~t~e~Ae~~L~~--aDlVai 345 (419)
T 3l5a_A 327 INSPESALDALQH--ADMVGM 345 (419)
T ss_dssp CCSHHHHHHHGGG--CSEEEE
T ss_pred CCCHHHHHHHHHh--CCcHHH
Confidence 8999999999987 787765
No 143
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=94.47 E-value=0.48 Score=45.85 Aligned_cols=122 Identities=15% Similarity=0.081 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhhcCCcEEEEeccCC----------chhhHHHHHHHHHh--------CCCcEEEEeCCCCCCHHHHHHH
Q 014285 205 PAEASELASKYCKLGFSTLKLNVGRN----------ITADFDVLQAIHAV--------HPHCSFILDANEGYTSEEAVEV 266 (427)
Q Consensus 205 ~~~~~~~~~~~~~~Gf~~iKlKiG~~----------~~~d~~~l~~ir~~--------~~~~~L~vDAN~~~s~~~A~~~ 266 (427)
.+++.+.++... .||..+-+.++.. .+.-.+.+++||+. ++++.+.|--+..|+.++..++
T Consensus 152 ~~~~~~aa~~~~-~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIY-AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHG-GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 667776666664 4999999988631 12224667888873 4577788877888999999999
Q ss_pred HHHhhhCCCCCceEeC-------------CCCCC------------ChhhHHHHHHhhcccc--CCeEEecCCCCCHHHH
Q 014285 267 LGKLNDMGVIPVLFEQ-------------PVHRD------------DWSGLHDVSNFARDTY--GISVVADESCRSLNDV 319 (427)
Q Consensus 267 l~~L~~~~l~~~~iEq-------------P~~~~------------d~~~~~~L~~~~r~~~--~iPIa~dE~~~~~~~~ 319 (427)
++.+++.++. +|.= |.... .++..+++++ .. ++||...=-+.+..++
T Consensus 231 a~~l~~~Gvd--~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~----~~~~~ipVi~~GGI~~~~da 304 (336)
T 1f76_A 231 ADSLVRHNID--GVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSL----ELNGRLPIIGVGGIDSVIAA 304 (336)
T ss_dssp HHHHHHTTCS--EEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHH----HHTTSSCEEEESSCCSHHHH
T ss_pred HHHHHHcCCc--EEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHH----HhCCCCCEEEECCCCCHHHH
Confidence 9999988864 4430 11000 0122333433 45 7999998899999999
Q ss_pred HHHHHcCCCcEEEeC
Q 014285 320 QKVMQENLASVVNIK 334 (427)
Q Consensus 320 ~~ll~~~a~~~i~lk 334 (427)
.++++.+ +|.|++=
T Consensus 305 ~~~l~~G-Ad~V~ig 318 (336)
T 1f76_A 305 REKIAAG-ASLVQIY 318 (336)
T ss_dssp HHHHHHT-CSEEEES
T ss_pred HHHHHCC-CCEEEee
Confidence 9999987 8988874
No 144
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.41 E-value=0.33 Score=46.62 Aligned_cols=145 Identities=11% Similarity=0.084 Sum_probs=94.4
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC--------------CchhhHHHHHHHHHhCCCcEE--EEeCCCCCCHHHHHH
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR--------------NITADFDVLQAIHAVHPHCSF--ILDANEGYTSEEAVE 265 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~--------------~~~~d~~~l~~ir~~~~~~~L--~vDAN~~~s~~~A~~ 265 (427)
..+++.+.+.++.+.+.|-..+||--+. +.++-.++|+++++.++++.+ |-|+......++|++
T Consensus 100 yg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~ 179 (305)
T 3ih1_A 100 FGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIE 179 (305)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHH
Confidence 3467777778888889999999997652 234557889999988776544 788875566899999
Q ss_pred HHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEec--CCCCC-HHHHHHHHHcCCCcEEEeCCCCcc--H
Q 014285 266 VLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVAD--ESCRS-LNDVQKVMQENLASVVNIKLAKFG--V 340 (427)
Q Consensus 266 ~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~d--E~~~~-~~~~~~ll~~~a~~~i~lk~~~~G--i 340 (427)
.++++.+.|-...|+|-+- +.+.++++++ ..++|+... |.-.+ .....++-+. .+..+..-++..- .
T Consensus 180 Ra~ay~eAGAD~i~~e~~~---~~~~~~~i~~----~~~~P~~~n~~~~g~tp~~~~~eL~~l-Gv~~v~~~~~~~raa~ 251 (305)
T 3ih1_A 180 RANAYVKAGADAIFPEALQ---SEEEFRLFNS----KVNAPLLANMTEFGKTPYYSAEEFANM-GFQMVIYPVTSLRVAA 251 (305)
T ss_dssp HHHHHHHHTCSEEEETTCC---SHHHHHHHHH----HSCSCBEEECCTTSSSCCCCHHHHHHT-TCSEEEECSHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCC---CHHHHHHHHH----HcCCCEEEeecCCCCCCCCCHHHHHHc-CCCEEEEchHHHHHHH
Confidence 9999999776556998762 4678888987 466777532 21111 1123344343 4666666554432 3
Q ss_pred HHHHHHHHHHHHcC
Q 014285 341 LGTLQIIKATRKSG 354 (427)
Q Consensus 341 ~~~~~~~~~A~~~g 354 (427)
....+.++.-.+.|
T Consensus 252 ~a~~~~~~~i~~~g 265 (305)
T 3ih1_A 252 KAYENVFTLIKETG 265 (305)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcC
Confidence 33444444444443
No 145
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.13 E-value=2.1 Score=39.36 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=97.9
Q ss_pred ecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCce
Q 014285 200 IPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVL 279 (427)
Q Consensus 200 i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~ 279 (427)
+...+++++.+.++.+++.|++.+.+..-. ....+.++++++.+|++.+... .-.+.+++...++.=.+ |
T Consensus 40 ir~~~~~~a~~~a~al~~gGi~~iEvt~~t--~~a~e~I~~l~~~~~~~~iGaG--TVlt~~~a~~Ai~AGA~------f 109 (232)
T 4e38_A 40 IAIDNAEDIIPLGKVLAENGLPAAEITFRS--DAAVEAIRLLRQAQPEMLIGAG--TILNGEQALAAKEAGAT------F 109 (232)
T ss_dssp ECCSSGGGHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHHHHHCTTCEEEEE--CCCSHHHHHHHHHHTCS------E
T ss_pred EEcCCHHHHHHHHHHHHHCCCCEEEEeCCC--CCHHHHHHHHHHhCCCCEEeEC--CcCCHHHHHHHHHcCCC------E
Confidence 445688899999999999999999997643 2456788889988887665544 46788877666554333 5
Q ss_pred EeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC-cc-HHHHHHHHHHHHHc-CCc
Q 014285 280 FEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK-FG-VLGTLQIIKATRKS-GLH 356 (427)
Q Consensus 280 iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~-~G-i~~~~~~~~~A~~~-gi~ 356 (427)
|=-|- .+ .+..+.|+ +.++|+..| +.|+.++.++++.+ +|++-+=|.- .| +.-... +.... +++
T Consensus 110 IvsP~--~~-~~vi~~~~----~~gi~~ipG--v~TptEi~~A~~~G-ad~vK~FPa~~~gG~~~lka---l~~p~p~ip 176 (232)
T 4e38_A 110 VVSPG--FN-PNTVRACQ----EIGIDIVPG--VNNPSTVEAALEMG-LTTLKFFPAEASGGISMVKS---LVGPYGDIR 176 (232)
T ss_dssp EECSS--CC-HHHHHHHH----HHTCEEECE--ECSHHHHHHHHHTT-CCEEEECSTTTTTHHHHHHH---HHTTCTTCE
T ss_pred EEeCC--CC-HHHHHHHH----HcCCCEEcC--CCCHHHHHHHHHcC-CCEEEECcCccccCHHHHHH---HHHHhcCCC
Confidence 54443 23 34455554 468999887 67999999999876 8999887753 34 433322 22333 799
Q ss_pred EEEcccC
Q 014285 357 LMIDGMI 363 (427)
Q Consensus 357 ~~~~s~~ 363 (427)
+++.+-+
T Consensus 177 ~~ptGGI 183 (232)
T 4e38_A 177 LMPTGGI 183 (232)
T ss_dssp EEEBSSC
T ss_pred eeeEcCC
Confidence 9988754
No 146
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.44 E-value=0.63 Score=44.50 Aligned_cols=101 Identities=12% Similarity=0.064 Sum_probs=77.0
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC--------------CchhhHHHHHHHHHh--CCCcEE--EEeCCCCCCHHHH
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR--------------NITADFDVLQAIHAV--HPHCSF--ILDANEGYTSEEA 263 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~--------------~~~~d~~~l~~ir~~--~~~~~L--~vDAN~~~s~~~A 263 (427)
..+++.+.+.++.+.+.|-..+||--+. +.++-+++|++.++. ++++-| |-|+......++|
T Consensus 94 yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldea 173 (298)
T 3eoo_A 94 WGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAA 173 (298)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHH
Confidence 3478888888888989999999996431 234557889888874 466444 8999866678999
Q ss_pred HHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
++.+++..+.|-...|+|-+- +.+.++++++ ..++|+..
T Consensus 174 i~Ra~ay~~AGAD~if~~~~~---~~ee~~~~~~----~~~~Pl~~ 212 (298)
T 3eoo_A 174 IERAIAYVEAGADMIFPEAMK---TLDDYRRFKE----AVKVPILA 212 (298)
T ss_dssp HHHHHHHHHTTCSEEEECCCC---SHHHHHHHHH----HHCSCBEE
T ss_pred HHHHHhhHhcCCCEEEeCCCC---CHHHHHHHHH----HcCCCeEE
Confidence 999999999876667999873 6788899987 45677744
No 147
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.16 E-value=1.9 Score=40.97 Aligned_cols=100 Identities=10% Similarity=0.119 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC-------------CchhhHHHHHHHHHh--CCCcE--EEEeCCCCCCHHHHH
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR-------------NITADFDVLQAIHAV--HPHCS--FILDANEGYTSEEAV 264 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-------------~~~~d~~~l~~ir~~--~~~~~--L~vDAN~~~s~~~A~ 264 (427)
..++++..+.++++.+.|-..+||--+. +.++-.++|+++++. .++.. =|-|+ .....++|+
T Consensus 93 yg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda-a~~gl~~ai 171 (287)
T 3b8i_A 93 YGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA-ELIDVDAVI 171 (287)
T ss_dssp SSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET-TTSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh-hhcCHHHHH
Confidence 3488888888999999999999997653 234567889999885 35544 47899 777899999
Q ss_pred HHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 265 EVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 265 ~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
+.++++.+.|-...|+|-+ + +.+.++++++ ..++|+..
T Consensus 172 ~Ra~ay~eAGAd~i~~e~~-~--~~~~~~~i~~----~~~~P~ii 209 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVGV-R--DFAHLEAIAE----HLHIPLML 209 (287)
T ss_dssp HHHHHHHHTTCSEEEEECC-C--SHHHHHHHHT----TCCSCEEE
T ss_pred HHHHHHHHcCCCEEEecCC-C--CHHHHHHHHH----hCCCCEEE
Confidence 9999999988666799974 3 4577888886 57788874
No 148
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=93.10 E-value=2.8 Score=39.98 Aligned_cols=144 Identities=14% Similarity=0.149 Sum_probs=97.3
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC--------------CchhhHHHHHHHHHh----CCCcEE--EEeCCCCCCHH
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR--------------NITADFDVLQAIHAV----HPHCSF--ILDANEGYTSE 261 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~--------------~~~~d~~~l~~ir~~----~~~~~L--~vDAN~~~s~~ 261 (427)
..++..+.+.++.+.+.|-..+||-=.. +.++-+++|++.++. ++++-| |.|+......+
T Consensus 91 yg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gld 170 (302)
T 3fa4_A 91 YGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYE 170 (302)
T ss_dssp TSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHH
Confidence 3477777788888889999999985321 345667888888762 577544 89987667899
Q ss_pred HHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEec--CC----CCCHHHHHHHHHcCCCcEEEeCC
Q 014285 262 EAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVAD--ES----CRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 262 ~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~d--E~----~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
+|++.+++..+.|-...|+|-+- +.++++++++.+ .++|+... |. ..+..++. +. .+..+..-.
T Consensus 171 eAi~Ra~ay~eAGAD~ifi~g~~---~~~ei~~~~~~~---~~~Pl~~n~~~~g~~p~~~~~eL~---~l-Gv~~v~~~~ 240 (302)
T 3fa4_A 171 ESVARLRAARDAGADVGFLEGIT---SREMARQVIQDL---AGWPLLLNMVEHGATPSISAAEAK---EM-GFRIIIFPF 240 (302)
T ss_dssp HHHHHHHHHHTTTCSEEEETTCC---CHHHHHHHHHHT---TTSCEEEECCTTSSSCCCCHHHHH---HH-TCSEEEETT
T ss_pred HHHHHHHHHHHcCCCEEeecCCC---CHHHHHHHHHHh---cCCceeEEEecCCCCCCCCHHHHH---Hc-CCCEEEEch
Confidence 99999999998776556898763 467888888732 14666442 21 23444443 33 467777766
Q ss_pred CCcc--HHHHHHHHHHHHHcCC
Q 014285 336 AKFG--VLGTLQIIKATRKSGL 355 (427)
Q Consensus 336 ~~~G--i~~~~~~~~~A~~~gi 355 (427)
+... +...++..+.-.+.|.
T Consensus 241 ~~~raa~~A~~~~~~~i~~~g~ 262 (302)
T 3fa4_A 241 AALGPAVAAMREAMEKLKRDGI 262 (302)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 6653 4555566555555654
No 149
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.76 E-value=0.33 Score=47.32 Aligned_cols=95 Identities=16% Similarity=0.247 Sum_probs=70.2
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCC-CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHR-DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~-~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
.+.+...+.+++|.+.|-. .+--.++. ++.+.+.++++ ++++|+.+|-++. ..-+...++.+ +|-+.+.|.
T Consensus 43 ~D~~atv~Qi~~l~~aG~d--iVRvavp~~~~a~al~~I~~----~~~vPlvaDiHf~-~~lal~a~e~G-~dklRINPG 114 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCE--IVRVAVPHKEDVEALEEIVK----KSPMPVIADIHFA-PSYAFLSMEKG-VHGIRINPG 114 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCC--EEEEECCSHHHHHHHHHHHH----HCSSCEEEECCSC-HHHHHHHHHTT-CSEEEECHH
T ss_pred cCHHHHHHHHHHHHHcCCC--EEEeCCCChHHHHHHHHHHh----cCCCCEEEeCCCC-HHHHHHHHHhC-CCeEEECCc
Confidence 3566667777778777753 67766764 22344555554 6899999997654 44455566653 888999999
Q ss_pred Ccc-HHHHHHHHHHHHHcCCcEEEc
Q 014285 337 KFG-VLGTLQIIKATRKSGLHLMID 360 (427)
Q Consensus 337 ~~G-i~~~~~~~~~A~~~gi~~~~~ 360 (427)
.+| -....++++.|+++|+++-++
T Consensus 115 Nig~~~~~~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 115 NIGKEEIVREIVEEAKRRGVAVRIG 139 (366)
T ss_dssp HHSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ccCchhHHHHHHHHHHHcCCCEEEe
Confidence 998 778899999999999999886
No 150
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=92.71 E-value=2.4 Score=40.57 Aligned_cols=152 Identities=13% Similarity=0.077 Sum_probs=97.7
Q ss_pred eeeeeee--cCCCHHHHHHHHHHHhhcCCcEEEEeccC--------------CchhhHHHHHHHHHh----CCCcEE--E
Q 014285 194 LSTAITI--PAVSPAEASELASKYCKLGFSTLKLNVGR--------------NITADFDVLQAIHAV----HPHCSF--I 251 (427)
Q Consensus 194 ip~~~~i--~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~--------------~~~~d~~~l~~ir~~----~~~~~L--~ 251 (427)
+|+-.-. +..+++.+.+.++.+.+.|-..+||-=+. +.++-+++|++.++. ++++-| |
T Consensus 89 ~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~AR 168 (307)
T 3lye_A 89 PPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIAR 168 (307)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 5544332 23477777788888889999999986431 334556788888762 566544 8
Q ss_pred EeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe--cCC----CCCHHHHHHHHHc
Q 014285 252 LDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA--DES----CRSLNDVQKVMQE 325 (427)
Q Consensus 252 vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~--dE~----~~~~~~~~~ll~~ 325 (427)
.|+......++|++.+++..+.|-...|+|-+- +.+.++++++.+ .++|+.. =|. ..+..++. +.
T Consensus 169 TDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~---~~~~~~~i~~~~---~~~Pv~~n~~~~g~~p~~t~~eL~---~l 239 (307)
T 3lye_A 169 TDALQSLGYEECIERLRAARDEGADVGLLEGFR---SKEQAAAAVAAL---APWPLLLNSVENGHSPLITVEEAK---AM 239 (307)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCS---CHHHHHHHHHHH---TTSCBEEEEETTSSSCCCCHHHHH---HH
T ss_pred chhhhccCHHHHHHHHHHHHHCCCCEEEecCCC---CHHHHHHHHHHc---cCCceeEEeecCCCCCCCCHHHHH---Hc
Confidence 998766679999999999988876656998652 567888888732 1366643 221 23444443 33
Q ss_pred CCCcEEEeCCCCcc--HHHHHHHHHHHHHcCC
Q 014285 326 NLASVVNIKLAKFG--VLGTLQIIKATRKSGL 355 (427)
Q Consensus 326 ~a~~~i~lk~~~~G--i~~~~~~~~~A~~~gi 355 (427)
+ +..+..-.+... ....++..+.-.+.|-
T Consensus 240 G-v~~v~~~~~~~raa~~a~~~~~~~l~~~g~ 270 (307)
T 3lye_A 240 G-FRIMIFSFATLAPAYAAIRETLVRLRDHGV 270 (307)
T ss_dssp T-CSEEEEETTTHHHHHHHHHHHHHHHHHHSC
T ss_pred C-CeEEEEChHHHHHHHHHHHHHHHHHHHhCC
Confidence 3 677765555443 4445555555555554
No 151
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.35 E-value=4.8 Score=35.48 Aligned_cols=145 Identities=11% Similarity=0.107 Sum_probs=92.2
Q ss_pred eeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhC-CCcEEEEeCCCCCCHHHHHHHHHHhhhCC
Q 014285 196 TAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVH-PHCSFILDANEGYTSEEAVEVLGKLNDMG 274 (427)
Q Consensus 196 ~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~-~~~~L~vDAN~~~s~~~A~~~l~~L~~~~ 274 (427)
+-..+...+++++.+.++.+.+.|+..+.+-.+.. .-.+.++.+|+.. ++..+.++. ..+++++.+..+ .+
T Consensus 12 ~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~--~~~~~i~~ir~~~~~~~~ig~~~--v~~~~~~~~a~~----~G 83 (205)
T 1wa3_A 12 IVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVP--DADTVIKELSFLKEKGAIIGAGT--VTSVEQCRKAVE----SG 83 (205)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTST--THHHHHHHTHHHHHTTCEEEEES--CCSHHHHHHHHH----HT
T ss_pred EEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCh--hHHHHHHHHHHHCCCCcEEEecc--cCCHHHHHHHHH----cC
Confidence 33445556888888889999899999998876642 2244588888864 467777653 457887655544 34
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc-cHHHHHHHHHHHHHc
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKS 353 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~-Gi~~~~~~~~~A~~~ 353 (427)
.. ++=-|... ..+.+.++ +.++|+.. .+.+..+..++++.+ +|++.+.+... |+.. +.++.+..
T Consensus 84 ad--~iv~~~~~---~~~~~~~~----~~g~~vi~--g~~t~~e~~~a~~~G-ad~vk~~~~~~~g~~~---~~~l~~~~ 148 (205)
T 1wa3_A 84 AE--FIVSPHLD---EEISQFCK----EKGVFYMP--GVMTPTELVKAMKLG-HTILKLFPGEVVGPQF---VKAMKGPF 148 (205)
T ss_dssp CS--EEECSSCC---HHHHHHHH----HHTCEEEC--EECSHHHHHHHHHTT-CCEEEETTHHHHHHHH---HHHHHTTC
T ss_pred CC--EEEcCCCC---HHHHHHHH----HcCCcEEC--CcCCHHHHHHHHHcC-CCEEEEcCccccCHHH---HHHHHHhC
Confidence 32 56233322 34445554 57899987 356788888888765 88887776322 2322 23333445
Q ss_pred -CCcEEEcccC
Q 014285 354 -GLHLMIDGMI 363 (427)
Q Consensus 354 -gi~~~~~s~~ 363 (427)
+++++..+-+
T Consensus 149 ~~~pvia~GGI 159 (205)
T 1wa3_A 149 PNVKFVPTGGV 159 (205)
T ss_dssp TTCEEEEBSSC
T ss_pred CCCcEEEcCCC
Confidence 7888877644
No 152
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=92.32 E-value=5.9 Score=36.01 Aligned_cols=143 Identities=12% Similarity=0.110 Sum_probs=92.9
Q ss_pred eecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCc
Q 014285 199 TIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278 (427)
Q Consensus 199 ~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~ 278 (427)
-+...++++..+.++++.+.|.+.+.+..-. ....+.++.+++.+|++.+..+. -.+.+++...++.=.++ +|
T Consensus 31 V~r~~~~~~~~~~~~al~~gGv~~iel~~k~--~~~~~~i~~l~~~~~~~~igagt--vl~~d~~~~A~~aGAd~-v~-- 103 (225)
T 1mxs_A 31 VITIAREEDILPLADALAAGGIRTLEVTLRS--QHGLKAIQVLREQRPELCVGAGT--VLDRSMFAAVEAAGAQF-VV-- 103 (225)
T ss_dssp EECCSCGGGHHHHHHHHHHTTCCEEEEESSS--THHHHHHHHHHHHCTTSEEEEEC--CCSHHHHHHHHHHTCSS-EE--
T ss_pred EEeCCCHHHHHHHHHHHHHCCCCEEEEecCC--ccHHHHHHHHHHhCcccEEeeCe--EeeHHHHHHHHHCCCCE-EE--
Confidence 3444577888888999999999999998532 34566788888888887776665 56777755554443332 22
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC-ccHHHHHHHHHHHHHc-CCc
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK-FGVLGTLQIIKATRKS-GLH 356 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~-~Gi~~~~~~~~~A~~~-gi~ 356 (427)
-| ..| ....+.++ ..++|+..| +.++.++.++++.+ +||+.+=|.. .| +..-+-++.... +++
T Consensus 104 ---~p--~~d-~~v~~~~~----~~g~~~i~G--~~t~~e~~~A~~~G-ad~vk~FPa~~~~--G~~~lk~i~~~~~~ip 168 (225)
T 1mxs_A 104 ---TP--GIT-EDILEAGV----DSEIPLLPG--ISTPSEIMMGYALG-YRRFKLFPAEISG--GVAAIKAFGGPFGDIR 168 (225)
T ss_dssp ---CS--SCC-HHHHHHHH----HCSSCEECE--ECSHHHHHHHHTTT-CCEEEETTHHHHT--HHHHHHHHHTTTTTCE
T ss_pred ---eC--CCC-HHHHHHHH----HhCCCEEEe--eCCHHHHHHHHHCC-CCEEEEccCcccc--CHHHHHHHHhhCCCCe
Confidence 22 333 34555554 577888776 88999998888764 8998885521 21 222223334445 799
Q ss_pred EEEcccC
Q 014285 357 LMIDGMI 363 (427)
Q Consensus 357 ~~~~s~~ 363 (427)
+++.+-+
T Consensus 169 vvaiGGI 175 (225)
T 1mxs_A 169 FCPTGGV 175 (225)
T ss_dssp EEEBSSC
T ss_pred EEEECCC
Confidence 9877644
No 153
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.15 E-value=6.1 Score=35.86 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=91.8
Q ss_pred cCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE
Q 014285 201 PAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF 280 (427)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i 280 (427)
...++++..+.++++.+.|.+.+.+..-. ....+.++.+++.+|++.+..+. -++.+++...++.=.+ ++
T Consensus 24 r~~~~~~~~~~~~al~~gGv~~iel~~k~--~~~~~~i~~l~~~~~~l~vgaGt--vl~~d~~~~A~~aGAd------~v 93 (224)
T 1vhc_A 24 ALDNADDILPLADTLAKNGLSVAEITFRS--EAAADAIRLLRANRPDFLIAAGT--VLTAEQVVLAKSSGAD------FV 93 (224)
T ss_dssp CCSSGGGHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHHHHHCTTCEEEEES--CCSHHHHHHHHHHTCS------EE
T ss_pred eCCCHHHHHHHHHHHHHcCCCEEEEeccC--chHHHHHHHHHHhCcCcEEeeCc--EeeHHHHHHHHHCCCC------EE
Confidence 34577888888999999999999998632 34567888888888876666664 5677665544443222 44
Q ss_pred eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC-cc-HHHHHHHHHHHHHc-CCcE
Q 014285 281 EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK-FG-VLGTLQIIKATRKS-GLHL 357 (427)
Q Consensus 281 EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~-~G-i~~~~~~~~~A~~~-gi~~ 357 (427)
=-| ..| ....+.++ +.++|+..| +.++.++.++.+.+ +||+-+=|.. .| +....++ .... ++++
T Consensus 94 ~~p--~~d-~~v~~~ar----~~g~~~i~G--v~t~~e~~~A~~~G-ad~vk~Fpa~~~gG~~~lk~l---~~~~~~ipv 160 (224)
T 1vhc_A 94 VTP--GLN-PKIVKLCQ----DLNFPITPG--VNNPMAIEIALEMG-ISAVKFFPAEASGGVKMIKAL---LGPYAQLQI 160 (224)
T ss_dssp ECS--SCC-HHHHHHHH----HTTCCEECE--ECSHHHHHHHHHTT-CCEEEETTTTTTTHHHHHHHH---HTTTTTCEE
T ss_pred EEC--CCC-HHHHHHHH----HhCCCEEec--cCCHHHHHHHHHCC-CCEEEEeeCccccCHHHHHHH---HhhCCCCeE
Confidence 223 333 33344443 477887777 78899998888765 8999887643 33 4333332 3334 7999
Q ss_pred EEcccC
Q 014285 358 MIDGMI 363 (427)
Q Consensus 358 ~~~s~~ 363 (427)
++.+-+
T Consensus 161 vaiGGI 166 (224)
T 1vhc_A 161 MPTGGI 166 (224)
T ss_dssp EEBSSC
T ss_pred EEECCc
Confidence 887644
No 154
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.61 E-value=4.2 Score=38.24 Aligned_cols=140 Identities=9% Similarity=0.091 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC--------CchhhHHHHHHHHHh----CCCcEE--EEeCCCC---C----CHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR--------NITADFDVLQAIHAV----HPHCSF--ILDANEG---Y----TSEE 262 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~--------~~~~d~~~l~~ir~~----~~~~~L--~vDAN~~---~----s~~~ 262 (427)
++++..+.++++.+.|-..+|+--+. +.++-.++|+++++. +.++.+ |-|+... . ..++
T Consensus 90 ~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ 169 (275)
T 2ze3_A 90 APEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAE 169 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHH
Confidence 78888888999999999999998653 445667889888875 665444 5677432 1 4789
Q ss_pred HHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEec--CCCCCHHHHHHHHHcCCCcEEEeCCCCcc-
Q 014285 263 AVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVAD--ESCRSLNDVQKVMQENLASVVNIKLAKFG- 339 (427)
Q Consensus 263 A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~d--E~~~~~~~~~~ll~~~a~~~i~lk~~~~G- 339 (427)
|++.++++.+.|-...|+|-+ + +.+.++++++ ..++|+..- ....+. .++-+. .+..+..-++..-
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~-~--~~~~~~~i~~----~~~~P~n~~~~~~~~~~---~eL~~l-Gv~~v~~~~~~~ra 238 (275)
T 2ze3_A 170 TVRRGQAYADAGADGIFVPLA-L--QSQDIRALAD----ALRVPLNVMAFPGSPVP---RALLDA-GAARVSFGQSLMLA 238 (275)
T ss_dssp HHHHHHHHHHTTCSEEECTTC-C--CHHHHHHHHH----HCSSCEEEECCTTSCCH---HHHHHT-TCSEEECTTHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCC-C--CHHHHHHHHH----hcCCCEEEecCCCCCCH---HHHHHc-CCcEEEEChHHHHH
Confidence 999999999987665689885 3 4677888887 466777443 333443 444444 4776665544332
Q ss_pred -HHHHHHHHHHHHHcC
Q 014285 340 -VLGTLQIIKATRKSG 354 (427)
Q Consensus 340 -i~~~~~~~~~A~~~g 354 (427)
.....+.++.-.+.|
T Consensus 239 a~~a~~~~~~~i~~~g 254 (275)
T 2ze3_A 239 TLGLVQRMAAELHAAE 254 (275)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhC
Confidence 333444444444444
No 155
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=91.60 E-value=2.8 Score=40.30 Aligned_cols=151 Identities=14% Similarity=0.131 Sum_probs=96.6
Q ss_pred ceeeeeeec--CCCHHHHHHHHHHHhhcCCcEEEEeccC--------------CchhhHHHHHHHHHhC--CCcEE--EE
Q 014285 193 SLSTAITIP--AVSPAEASELASKYCKLGFSTLKLNVGR--------------NITADFDVLQAIHAVH--PHCSF--IL 252 (427)
Q Consensus 193 ~ip~~~~i~--~~~~~~~~~~~~~~~~~Gf~~iKlKiG~--------------~~~~d~~~l~~ir~~~--~~~~L--~v 252 (427)
.+|+-.-.+ ..++++..+-++++.+.|-..+||--+. +.++-.++|+++++.. ++..+ |-
T Consensus 101 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt 180 (318)
T 1zlp_A 101 NLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVART 180 (318)
T ss_dssp SSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEE
T ss_pred CCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEee
Confidence 455544332 3488888888999999999999996542 2335567899998843 55443 67
Q ss_pred eCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEec--C----CCCCHHHHHHHHHcC
Q 014285 253 DANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVAD--E----SCRSLNDVQKVMQEN 326 (427)
Q Consensus 253 DAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~d--E----~~~~~~~~~~ll~~~ 326 (427)
|+......+++++.++++.+.|-...|+|-+ + +.+.++++++ ..++|+... | ...+ .+++-+.+
T Consensus 181 da~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~-~--~~e~~~~i~~----~l~~P~lan~~~~g~~~~~~---~~eL~~lG 250 (318)
T 1zlp_A 181 DARAPHGLEEGIRRANLYKEAGADATFVEAP-A--NVDELKEVSA----KTKGLRIANMIEGGKTPLHT---PEEFKEMG 250 (318)
T ss_dssp CTHHHHHHHHHHHHHHHHHHTTCSEEEECCC-C--SHHHHHHHHH----HSCSEEEEEECTTSSSCCCC---HHHHHHHT
T ss_pred HHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC-C--CHHHHHHHHH----hcCCCEEEEeccCCCCCCCC---HHHHHHcC
Confidence 8775445689999999999988666799975 3 5678888987 567898532 2 1223 33444443
Q ss_pred CCcEEEeCCCCc-c-HHHHHHHHHHHHHcC
Q 014285 327 LASVVNIKLAKF-G-VLGTLQIIKATRKSG 354 (427)
Q Consensus 327 a~~~i~lk~~~~-G-i~~~~~~~~~A~~~g 354 (427)
+..+..-+... - .....+.++.-++.|
T Consensus 251 -v~~v~~~~~~~raa~~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 251 -FHLIAHSLTAVYATARALVNIMKILKEKG 279 (318)
T ss_dssp -CCEEEECSHHHHHHHHHHHHHHHHHHHHS
T ss_pred -CeEEEEchHHHHHHHHHHHHHHHHHHHcC
Confidence 66666554433 2 333344444434433
No 156
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=91.51 E-value=0.43 Score=43.47 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCCCC-hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD-WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d-~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
.++++|.+.+++|-+-+++ +||=++...+ .+.++++++ +.+-++..--.+.+..+++.+++.+ .+++.- |+
T Consensus 22 ~~~~~a~~~a~al~~gGi~--~iEvt~~t~~a~~~I~~l~~----~~p~~~IGAGTVlt~~~a~~ai~AG-A~fivs-P~ 93 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVH--LLEVTLRTEAGLAAISAIKK----AVPEAIVGAGTVCTADDFQKAIDAG-AQFIVS-PG 93 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCC--EEEEETTSTTHHHHHHHHHH----HCTTSEEEEECCCSHHHHHHHHHHT-CSEEEE-SS
T ss_pred CCHHHHHHHHHHHHHcCCC--EEEEeCCCccHHHHHHHHHH----HCCCCeEeeccccCHHHHHHHHHcC-CCEEEe-CC
Confidence 4689999999999999986 9999997544 455677765 3343444444888999999999997 566543 33
Q ss_pred CccHHHHHHHHHHHHHcCC------cEEEcccCchh
Q 014285 337 KFGVLGTLQIIKATRKSGL------HLMIDGMIETR 366 (427)
Q Consensus 337 ~~Gi~~~~~~~~~A~~~gi------~~~~~s~~es~ 366 (427)
. ..++++.|+++|+ +++++.+.-+.
T Consensus 94 ~-----~~evi~~~~~~~v~~~~~~~~~PG~~TptE 124 (217)
T 3lab_A 94 L-----TPELIEKAKQVKLDGQWQGVFLPGVATASE 124 (217)
T ss_dssp C-----CHHHHHHHHHHHHHCSCCCEEEEEECSHHH
T ss_pred C-----cHHHHHHHHHcCCCccCCCeEeCCCCCHHH
Confidence 2 2478889999999 99999876554
No 157
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=91.30 E-value=6 Score=35.81 Aligned_cols=142 Identities=13% Similarity=0.092 Sum_probs=99.3
Q ss_pred eecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCc
Q 014285 199 TIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278 (427)
Q Consensus 199 ~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~ 278 (427)
-+...+++++.+.++.+++.|++.+-+-.-. ..-++.++++++.+|++.+-. ..-.|.+++.+.++.=.+
T Consensus 18 Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t--~~a~~~I~~l~~~~p~~~IGA--GTVlt~~~a~~ai~AGA~------ 87 (217)
T 3lab_A 18 VIVIDDLVHAIPMAKALVAGGVHLLEVTLRT--EAGLAAISAIKKAVPEAIVGA--GTVCTADDFQKAIDAGAQ------ 87 (217)
T ss_dssp EECCSCGGGHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHHHHHCTTSEEEE--ECCCSHHHHHHHHHHTCS------
T ss_pred EEEcCCHHHHHHHHHHHHHcCCCEEEEeCCC--ccHHHHHHHHHHHCCCCeEee--ccccCHHHHHHHHHcCCC------
Confidence 3445688999999999999999999997643 345778899999888865544 466788887776665444
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCC------eEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC-cc-HHHHHHHHHHH
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGI------SVVADESCRSLNDVQKVMQENLASVVNIKLAK-FG-VLGTLQIIKAT 350 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~i------PIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~-~G-i~~~~~~~~~A 350 (427)
||=-|.- ..++.+.|+ +.++ |+.-| +.|+.++.++++.+ +|++.+=|.. .| ..-...+ .
T Consensus 88 fivsP~~---~~evi~~~~----~~~v~~~~~~~~~PG--~~TptE~~~A~~~G-ad~vK~FPa~~~gG~~~lkal---~ 154 (217)
T 3lab_A 88 FIVSPGL---TPELIEKAK----QVKLDGQWQGVFLPG--VATASEVMIAAQAG-ITQLKCFPASAIGGAKLLKAW---S 154 (217)
T ss_dssp EEEESSC---CHHHHHHHH----HHHHHCSCCCEEEEE--ECSHHHHHHHHHTT-CCEEEETTTTTTTHHHHHHHH---H
T ss_pred EEEeCCC---cHHHHHHHH----HcCCCccCCCeEeCC--CCCHHHHHHHHHcC-CCEEEECccccccCHHHHHHH---H
Confidence 4544553 344555554 4678 88885 57999999998876 8999888865 34 4332222 2
Q ss_pred HHc-CCcEEEcccC
Q 014285 351 RKS-GLHLMIDGMI 363 (427)
Q Consensus 351 ~~~-gi~~~~~s~~ 363 (427)
... ++++++.+-+
T Consensus 155 ~p~p~i~~~ptGGI 168 (217)
T 3lab_A 155 GPFPDIQFCPTGGI 168 (217)
T ss_dssp TTCTTCEEEEBSSC
T ss_pred hhhcCceEEEeCCC
Confidence 223 7899988754
No 158
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=90.97 E-value=2.8 Score=40.87 Aligned_cols=134 Identities=15% Similarity=0.182 Sum_probs=86.2
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCc-EEEEeccC-------Cchhh----HHHHHHHHHhC--C-CcEEEEeCCCCC
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFS-TLKLNVGR-------NITAD----FDVLQAIHAVH--P-HCSFILDANEGY 258 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~-~iKlKiG~-------~~~~d----~~~l~~ir~~~--~-~~~L~vDAN~~~ 258 (427)
.|+..++...+++++.+.++.+.+.||. .|-+.++. .+..| .+.++++|+.. | -++|+.| +
T Consensus 129 ~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~----~ 204 (345)
T 3oix_A 129 KNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY----F 204 (345)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC----C
T ss_pred CCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC----C
Confidence 4555677667899998888888778998 89999872 23233 44566666642 3 2455544 6
Q ss_pred CHHHHHHHHHHhhhCCCCC--c--------eEe--CCC---------------CCCChhhHHHHHHhhcccc--CCeEEe
Q 014285 259 TSEEAVEVLGKLNDMGVIP--V--------LFE--QPV---------------HRDDWSGLHDVSNFARDTY--GISVVA 309 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~--~--------~iE--qP~---------------~~~d~~~~~~L~~~~r~~~--~iPIa~ 309 (427)
+.++..+.++.+...++.. . -|. .|. ++-.++..+++++ .. .+||..
T Consensus 205 ~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~----~~~~~ipIIg 280 (345)
T 3oix_A 205 DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYK----RLNPSIQIIG 280 (345)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHT----TSCTTSEEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHH----HcCCCCcEEE
Confidence 7777677777665554420 0 022 221 1111334445543 55 699999
Q ss_pred cCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 310 DESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 310 dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
.=-+.+..|+.+.+..+ +|.|++=-.
T Consensus 281 ~GGI~s~~da~~~l~aG-Ad~V~igra 306 (345)
T 3oix_A 281 TGGVXTGRDAFEHILCG-ASMVQIGTA 306 (345)
T ss_dssp ESSCCSHHHHHHHHHHT-CSEEEESHH
T ss_pred ECCCCChHHHHHHHHhC-CCEEEEChH
Confidence 98999999999999876 788887544
No 159
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.87 E-value=0.89 Score=43.16 Aligned_cols=93 Identities=12% Similarity=0.197 Sum_probs=67.6
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeCCC--C-------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCC
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPV--H-------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEqP~--~-------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a 327 (427)
.++.++.++++++|++.++. +||.=. . .++++.++.++ +..++|++.- +.+..+++++++.+
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~--~IE~g~~~~~~~~p~~~~~~e~~~~i~----~~~~~~v~~l--~~n~~~i~~a~~~G- 92 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYA--RIEATSFVSPKWVPQLADSREVMAGIR----RADGVRYSVL--VPNMKGYEAAAAAH- 92 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCS--EEEEEECSCTTTCGGGTTHHHHHHHSC----CCSSSEEEEE--CSSHHHHHHHHHTT-
T ss_pred CcCHHHHHHHHHHHHHcCcC--EEEEccCcCccccccccCHHHHHHHHH----hCCCCEEEEE--eCCHHHHHHHHHCC-
Confidence 47999999999999999985 899833 1 23444455553 2457888442 26888999999876
Q ss_pred CcEEEeCC--C--------Cc---c-HHHHHHHHHHHHHcCCcEE
Q 014285 328 ASVVNIKL--A--------KF---G-VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 328 ~~~i~lk~--~--------~~---G-i~~~~~~~~~A~~~gi~~~ 358 (427)
++.|.+.. + .. + +..+.++++.|+++|+.+.
T Consensus 93 ~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~ 137 (295)
T 1ydn_A 93 ADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR 137 (295)
T ss_dssp CSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 66777763 3 22 3 6667888999999999986
No 160
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=90.71 E-value=4.7 Score=37.99 Aligned_cols=131 Identities=16% Similarity=0.174 Sum_probs=79.8
Q ss_pred eeeeeecCCCHHHHHHHHHHHhh-cCCcEEEEeccC------------CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCH
Q 014285 195 STAITIPAVSPAEASELASKYCK-LGFSTLKLNVGR------------NITADFDVLQAIHAV-HPHCSFILDANEGYTS 260 (427)
Q Consensus 195 p~~~~i~~~~~~~~~~~~~~~~~-~Gf~~iKlKiG~------------~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~ 260 (427)
|+..++...+++++.+.++.+.+ .|+..+.+.++. +.+.-.+.++++|+. .--+-+++=. .++
T Consensus 100 p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~--~~~- 176 (311)
T 1ep3_A 100 PIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSP--NVT- 176 (311)
T ss_dssp CEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECS--CSS-
T ss_pred cEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECC--ChH-
Confidence 44455555678888777777766 899999998762 222336778888885 3223333322 222
Q ss_pred HHHHHHHHHhhhCCCCCceEeC----------CCCC--------------CC----hhhHHHHHHhhccccCCeEEecCC
Q 014285 261 EEAVEVLGKLNDMGVIPVLFEQ----------PVHR--------------DD----WSGLHDVSNFARDTYGISVVADES 312 (427)
Q Consensus 261 ~~A~~~l~~L~~~~l~~~~iEq----------P~~~--------------~d----~~~~~~L~~~~r~~~~iPIa~dE~ 312 (427)
+..++++.+++.++. +|-= +-.. .. ++..++++ +.+.+||...=-
T Consensus 177 -~~~~~a~~l~~~G~d--~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~----~~~~ipvia~GG 249 (311)
T 1ep3_A 177 -DIVPIAKAVEAAGAD--GLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVA----QDVDIPIIGMGG 249 (311)
T ss_dssp -CSHHHHHHHHHTTCS--EEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHH----TTCSSCEEECSS
T ss_pred -HHHHHHHHHHHcCCC--EEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHH----HhcCCCEEEECC
Confidence 234456666666654 3321 1000 00 12333443 467899999888
Q ss_pred CCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 313 CRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 313 ~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
+.+..++.++++.+ +|.+++=-.
T Consensus 250 I~~~~d~~~~l~~G-Ad~V~vg~~ 272 (311)
T 1ep3_A 250 VANAQDVLEMYMAG-ASAVAVGTA 272 (311)
T ss_dssp CCSHHHHHHHHHHT-CSEEEECTH
T ss_pred cCCHHHHHHHHHcC-CCEEEECHH
Confidence 89999999999887 888887543
No 161
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=90.58 E-value=1.6 Score=41.60 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC--------------CchhhHHHHHHHHHh--CCCc--EEEEeCCCCCCHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR--------------NITADFDVLQAIHAV--HPHC--SFILDANEGYTSEEAVE 265 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~--------------~~~~d~~~l~~ir~~--~~~~--~L~vDAN~~~s~~~A~~ 265 (427)
+++.+.+.++++.+.|...+||--|. +.++-.++|+++++. ++++ .-|-|+......++|++
T Consensus 92 ~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ 171 (295)
T 1xg4_A 92 SAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIE 171 (295)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHH
Confidence 78888888999989999999997652 223456788888875 4554 44778765456799999
Q ss_pred HHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe--cCC-CCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 266 VLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA--DES-CRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 266 ~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~--dE~-~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
.++++++.|....|+|-+ + +++.++++++ ..++|+.. .|. .......+++-+. .++.+..-.+.
T Consensus 172 ra~ay~eAGAd~i~~e~~-~--~~~~~~~i~~----~~~iP~~~N~~~~g~~p~~~~~eL~~~-G~~~v~~~~~~ 238 (295)
T 1xg4_A 172 RAQAYVEAGAEMLFPEAI-T--ELAMYRQFAD----AVQVPILANITEFGATPLFTTDELRSA-HVAMALYPLSA 238 (295)
T ss_dssp HHHHHHHTTCSEEEETTC-C--SHHHHHHHHH----HHCSCBEEECCSSSSSCCCCHHHHHHT-TCSEEEESSHH
T ss_pred HHHHHHHcCCCEEEEeCC-C--CHHHHHHHHH----HcCCCEEEEecccCCCCCCCHHHHHHc-CCCEEEEChHH
Confidence 999999988666799975 3 5788889987 46788743 331 1111223444444 47776665443
No 162
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=90.50 E-value=0.34 Score=50.55 Aligned_cols=146 Identities=14% Similarity=0.111 Sum_probs=92.5
Q ss_pred HHHHHHHHhhcCCcEEEEeccC--C---------chhhHHHHHHHHHhCC--CcEEEEeCC-------------------
Q 014285 208 ASELASKYCKLGFSTLKLNVGR--N---------ITADFDVLQAIHAVHP--HCSFILDAN------------------- 255 (427)
Q Consensus 208 ~~~~~~~~~~~Gf~~iKlKiG~--~---------~~~d~~~l~~ir~~~~--~~~L~vDAN------------------- 255 (427)
+.+.++++.+.|...+=+--+. + ...+.+.++.+.+.++ .+-+.+|+.
T Consensus 349 ~~~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~ 428 (555)
T 1jvn_A 349 ALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEY 428 (555)
T ss_dssp HHHHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSS
T ss_pred HHHHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccc
Confidence 4566777888886644333221 0 0113467888888654 488899983
Q ss_pred ----C-----------CCCH---HHHHHHHHHhhhCCCCCceEeCCC------CCCChhhHHHHHHhhccccCCeEEecC
Q 014285 256 ----E-----------GYTS---EEAVEVLGKLNDMGVIPVLFEQPV------HRDDWSGLHDVSNFARDTYGISVVADE 311 (427)
Q Consensus 256 ----~-----------~~s~---~~A~~~l~~L~~~~l~~~~iEqP~------~~~d~~~~~~L~~~~r~~~~iPIa~dE 311 (427)
+ +|+. -++.++++.+++++.. ..+=..+ .--|++.++++++ .+++||.+.=
T Consensus 429 ~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~-~il~t~~~~dG~~~G~d~~li~~l~~----~~~iPVIasG 503 (555)
T 1jvn_A 429 PGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAG-EILLNCIDKDGSNSGYDLELIEHVKD----AVKIPVIASS 503 (555)
T ss_dssp CCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCC-EEEECCGGGTTTCSCCCHHHHHHHHH----HCSSCEEECS
T ss_pred cCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCC-EEEEeCCCCCCCCCCCCHHHHHHHHH----hCCccEEEEC
Confidence 3 2421 2356788888887764 2332222 2237888888875 5789998877
Q ss_pred CCCCHHHHHHHHHcCCCcEEEeCCCCc-cHHHHHHHHHHHHHcCCcEE
Q 014285 312 SCRSLNDVQKVMQENLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 312 ~~~~~~~~~~ll~~~a~~~i~lk~~~~-Gi~~~~~~~~~A~~~gi~~~ 358 (427)
-+.+..|++++++...++.+++--... |-....++.+..++.|+++-
T Consensus 504 Gi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~~l~~~gi~~r 551 (555)
T 1jvn_A 504 GAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKVR 551 (555)
T ss_dssp CCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHHHHHHTTCCCC
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHHHHHHCCCccc
Confidence 889999999999843466665543333 32234556667788888753
No 163
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.30 E-value=6.4 Score=37.30 Aligned_cols=130 Identities=12% Similarity=0.027 Sum_probs=84.9
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC----------------CchhhHHHHHHHHHhC--CCc--EEEEeCC-CCCCH
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR----------------NITADFDVLQAIHAVH--PHC--SFILDAN-EGYTS 260 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~----------------~~~~d~~~l~~ir~~~--~~~--~L~vDAN-~~~s~ 260 (427)
..++++..+.++++.+.|-..+|+--+. +.++-+++|+++++.. ++. .=|-|+. .....
T Consensus 86 yg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 165 (290)
T 2hjp_A 86 FGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQ 165 (290)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccH
Confidence 3478888888999999999999997542 1223377888888853 454 4478887 66779
Q ss_pred HHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC
Q 014285 261 EEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 261 ~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
++|++.++++.+.|-...|+|--++ +.+.++++++.+ ..++|+...=.......+.++-+.+.+..+..-+
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~e~~~~--~~~~~~~i~~~~--~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~ 236 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILIHSRQK--TPDEILAFVKSW--PGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGN 236 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCS--SSHHHHHHHHHC--CCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECS
T ss_pred HHHHHHHHHHHHcCCcEEEeCCCCC--CHHHHHHHHHHc--CCCCCEEEeccCCCCCCHHHHHhcCCeeEEEech
Confidence 9999999999998866669998333 346678888632 1238987531100111234444433355555444
No 164
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=90.12 E-value=10 Score=34.06 Aligned_cols=141 Identities=14% Similarity=0.095 Sum_probs=93.0
Q ss_pred ecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCce
Q 014285 200 IPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVL 279 (427)
Q Consensus 200 i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~ 279 (427)
+...++++..+.++++.+.|.+.+.+..-. ....+.++.+++.++++.+..+. -.+.+++...++.=.+ +
T Consensus 22 ~r~~~~~~~~~~~~al~~gGv~~iel~~k~--~~~~~~i~~l~~~~~~~~vgagt--vi~~d~~~~A~~aGAd------~ 91 (214)
T 1wbh_A 22 IVVKKLEHAVPMAKALVAGGVRVLNVTLRT--ECAVDAIRAIAKEVPEAIVGAGT--VLNPQQLAEVTEAGAQ------F 91 (214)
T ss_dssp ECCSSGGGHHHHHHHHHHTTCCEEEEESCS--TTHHHHHHHHHHHCTTSEEEEES--CCSHHHHHHHHHHTCS------C
T ss_pred EECCCHHHHHHHHHHHHHcCCCEEEEeCCC--hhHHHHHHHHHHHCcCCEEeeCE--EEEHHHHHHHHHcCCC------E
Confidence 344678888888999999999999998632 34466888888888877666654 6677765554443333 2
Q ss_pred EeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC-cc-HHHHHHHHHHHHHc-CCc
Q 014285 280 FEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK-FG-VLGTLQIIKATRKS-GLH 356 (427)
Q Consensus 280 iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~-~G-i~~~~~~~~~A~~~-gi~ 356 (427)
+=-| ..| ....+.++ ..++|+..| +.++.++.++++.+ +||+-+=|.. .| +.... ++.... +++
T Consensus 92 v~~p--~~d-~~v~~~~~----~~g~~~i~G--~~t~~e~~~A~~~G-ad~v~~Fpa~~~gG~~~lk---~i~~~~~~ip 158 (214)
T 1wbh_A 92 AISP--GLT-EPLLKAAT----EGTIPLIPG--ISTVSELMLGMDYG-LKEFKFFPAEANGGVKALQ---AIAGPFSQVR 158 (214)
T ss_dssp EEES--SCC-HHHHHHHH----HSSSCEEEE--ESSHHHHHHHHHTT-CCEEEETTTTTTTHHHHHH---HHHTTCTTCE
T ss_pred EEcC--CCC-HHHHHHHH----HhCCCEEEe--cCCHHHHHHHHHCC-CCEEEEecCccccCHHHHH---HHhhhCCCCe
Confidence 3223 333 34455554 477888776 88899998888765 8999886643 23 33322 233445 799
Q ss_pred EEEcccC
Q 014285 357 LMIDGMI 363 (427)
Q Consensus 357 ~~~~s~~ 363 (427)
++..+-+
T Consensus 159 vvaiGGI 165 (214)
T 1wbh_A 159 FCPTGGI 165 (214)
T ss_dssp EEEBSSC
T ss_pred EEEECCC
Confidence 8877644
No 165
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.95 E-value=1.2 Score=40.93 Aligned_cols=94 Identities=11% Similarity=0.081 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHhhhCCCCCceEeCCCCCCC-hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDD-WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d-~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
+++++.+++++|-+-|+. +||=++...+ .+.++++++. --.+-|..| .+.+..+++.+++.+ ++++.. |.
T Consensus 44 ~~~~a~~~a~al~~gGi~--~iEvt~~t~~a~e~I~~l~~~---~~~~~iGaG-TVlt~~~a~~Ai~AG-A~fIvs-P~- 114 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLP--AAEITFRSDAAVEAIRLLRQA---QPEMLIGAG-TILNGEQALAAKEAG-ATFVVS-PG- 114 (232)
T ss_dssp SGGGHHHHHHHHHHTTCC--EEEEETTSTTHHHHHHHHHHH---CTTCEEEEE-CCCSHHHHHHHHHHT-CSEEEC-SS-
T ss_pred CHHHHHHHHHHHHHCCCC--EEEEeCCCCCHHHHHHHHHHh---CCCCEEeEC-CcCCHHHHHHHHHcC-CCEEEe-CC-
Confidence 578999999999999986 9999887544 4456666652 123445555 588899999999987 566653 22
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEcccCch
Q 014285 338 FGVLGTLQIIKATRKSGLHLMIDGMIET 365 (427)
Q Consensus 338 ~Gi~~~~~~~~~A~~~gi~~~~~s~~es 365 (427)
+ ..++++.|+++|++++++.+.-+
T Consensus 115 --~--~~~vi~~~~~~gi~~ipGv~Tpt 138 (232)
T 4e38_A 115 --F--NPNTVRACQEIGIDIVPGVNNPS 138 (232)
T ss_dssp --C--CHHHHHHHHHHTCEEECEECSHH
T ss_pred --C--CHHHHHHHHHcCCCEEcCCCCHH
Confidence 1 25678889999999999987543
No 166
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=89.71 E-value=3.5 Score=40.27 Aligned_cols=118 Identities=14% Similarity=0.252 Sum_probs=73.8
Q ss_pred HHHHHHHhhcCCcEEEEeccC------------C---------ch----hhHHHHHHHHH-hCCC-cEEEEeCCC----C
Q 014285 209 SELASKYCKLGFSTLKLNVGR------------N---------IT----ADFDVLQAIHA-VHPH-CSFILDANE----G 257 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~------------~---------~~----~d~~~l~~ir~-~~~~-~~L~vDAN~----~ 257 (427)
.+.|+..+++||..|.|+.+. + ++ -=++.+++||+ ++++ +-+|+-++. .
T Consensus 155 ~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~ 234 (358)
T 4a3u_A 155 EKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGT 234 (358)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTB
T ss_pred HHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCC
Confidence 445677788999999999852 1 11 12667899998 5655 556665542 2
Q ss_pred C---CHHHHHHHHHHhhhCCCCCceEe-------CCCCCCChhhH-HHHHHhhccccCCeEEecCCCCCHHHHHHHHHcC
Q 014285 258 Y---TSEEAVEVLGKLNDMGVIPVLFE-------QPVHRDDWSGL-HDVSNFARDTYGISVVADESCRSLNDVQKVMQEN 326 (427)
Q Consensus 258 ~---s~~~A~~~l~~L~~~~l~~~~iE-------qP~~~~d~~~~-~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~ 326 (427)
+ +.++.+..++.+.+.++. +++ .+........+ ++++ +....||+.+- ..+.+..+++|+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~a~~ik----~~~~~~v~~~g-~~~~~~ae~~l~~G 307 (358)
T 4a3u_A 235 VDSHPEQVFIPAAKMLSDLDIA--FLGMREGAVDGTFGKTDQPKLSPEIR----KVFKPPLVLNQ-DYTFETAQAALDSG 307 (358)
T ss_dssp CCSSTHHHHHHHHHHHHHHTCS--EEEEECCBTTCSSSBCSSCCCHHHHH----HHCCSCEEEES-SCCHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHhhhccCcc--ccccccccccCcccccccHHHHHHHH----HhcCCcEEEeC-CCCHHHHHHHHHcC
Confidence 2 345556777888877653 333 22222222222 2333 34667887763 56888899999999
Q ss_pred CCcEEEe
Q 014285 327 LASVVNI 333 (427)
Q Consensus 327 a~~~i~l 333 (427)
.+|.|-+
T Consensus 308 ~aD~V~~ 314 (358)
T 4a3u_A 308 VADAISF 314 (358)
T ss_dssp SCSEEEE
T ss_pred CceEeHh
Confidence 9998654
No 167
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=89.05 E-value=2.9 Score=40.91 Aligned_cols=130 Identities=15% Similarity=0.118 Sum_probs=85.3
Q ss_pred eeeeeeecCCCHHHHHHHHHHHh---hcCCcEEEEeccC-------Cc----hhhHHHHHHHHHhC--C-CcEEEEeCCC
Q 014285 194 LSTAITIPAVSPAEASELASKYC---KLGFSTLKLNVGR-------NI----TADFDVLQAIHAVH--P-HCSFILDANE 256 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~---~~Gf~~iKlKiG~-------~~----~~d~~~l~~ir~~~--~-~~~L~vDAN~ 256 (427)
.|+..++...+++++.+.++.+. +.|+..|-+.+|. .+ +.-.+.++++|+.. | -++|+.|
T Consensus 127 ~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~--- 203 (354)
T 4ef8_A 127 KPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPY--- 203 (354)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCC---
T ss_pred CcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCC---
Confidence 45556665668888877776665 5689999999872 23 33345677788753 3 2455544
Q ss_pred CCCHHHHHHHHHHhhhCC-CCCceE----------------eCC---------------CCCCChhhHHHHHHhhcccc-
Q 014285 257 GYTSEEAVEVLGKLNDMG-VIPVLF----------------EQP---------------VHRDDWSGLHDVSNFARDTY- 303 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~-l~~~~i----------------EqP---------------~~~~d~~~~~~L~~~~r~~~- 303 (427)
|+.++..+.++.+.+.+ +. .| +.| +++-+++..+++++ ..
T Consensus 204 -~d~~~~~~~a~~~~~~Gg~d--~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~----~~~ 276 (354)
T 4ef8_A 204 -FDFAHFDAAAEILNEFPKVQ--FITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYR----RCP 276 (354)
T ss_dssp -CSHHHHHHHHHHHHTCTTEE--EEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHH----HCT
T ss_pred -CCHHHHHHHHHHHHhCCCcc--EEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHH----hCC
Confidence 67777777777777765 31 11 111 11223455566654 33
Q ss_pred CCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 304 GISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 304 ~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
.+||...=-+.+..|+.+++..+ ++.|++=
T Consensus 277 ~ipII~~GGI~s~~da~~~l~aG-Ad~V~vg 306 (354)
T 4ef8_A 277 GKLIFGCGGVYTGEDAFLHVLAG-ASMVQVG 306 (354)
T ss_dssp TSEEEEESCCCSHHHHHHHHHHT-EEEEEEC
T ss_pred CCCEEEECCcCCHHHHHHHHHcC-CCEEEEh
Confidence 69999998999999999999876 7888864
No 168
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=88.88 E-value=9.8 Score=34.20 Aligned_cols=115 Identities=12% Similarity=0.167 Sum_probs=74.0
Q ss_pred HHHHHHhhcCCcEEEEeccCC--c--hhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC--CCceEe--
Q 014285 210 ELASKYCKLGFSTLKLNVGRN--I--TADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGV--IPVLFE-- 281 (427)
Q Consensus 210 ~~~~~~~~~Gf~~iKlKiG~~--~--~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l--~~~~iE-- 281 (427)
++++.+.+.|...+-+..... + +.-.+.++.+|+.+++..+.++.+ +++++....+.=.++ + .+.-++
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~---t~~ea~~a~~~Gad~-i~~~v~g~~~~ 167 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIS---TFDEGLVAHQAGIDF-VGTTLSGYTPY 167 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECS---SHHHHHHHHHTTCSE-EECTTTTSSTT
T ss_pred HHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCC---CHHHHHHHHHcCCCE-EeeeccccCCC
Confidence 345566789999886665421 2 123678899999888888999875 677765554432221 0 000011
Q ss_pred -CCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 282 -QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 282 -qP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
++....+++.++++++ . ++||..+=-+.+..++.++++.+ ++.+.+=
T Consensus 168 ~~~~~~~~~~~i~~~~~----~-~ipvia~GGI~s~~~~~~~~~~G-ad~v~vG 215 (234)
T 1yxy_A 168 SRQEAGPDVALIEALCK----A-GIAVIAEGKIHSPEEAKKINDLG-VAGIVVG 215 (234)
T ss_dssp SCCSSSCCHHHHHHHHH----T-TCCEEEESCCCSHHHHHHHHTTC-CSEEEEC
T ss_pred CcCCCCCCHHHHHHHHh----C-CCCEEEECCCCCHHHHHHHHHCC-CCEEEEc
Confidence 2223345677777764 4 79998887888899999999876 7776653
No 169
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=87.71 E-value=4.5 Score=38.99 Aligned_cols=142 Identities=13% Similarity=0.139 Sum_probs=89.8
Q ss_pred HHHHHHHHh-hcCCcEEEEec-cC-------CchhhHHHHHHHHHhCCCcEEEEe--CCCCCCHHHHHHHHHHhhhC-CC
Q 014285 208 ASELASKYC-KLGFSTLKLNV-GR-------NITADFDVLQAIHAVHPHCSFILD--ANEGYTSEEAVEVLGKLNDM-GV 275 (427)
Q Consensus 208 ~~~~~~~~~-~~Gf~~iKlKi-G~-------~~~~d~~~l~~ir~~~~~~~L~vD--AN~~~s~~~A~~~l~~L~~~-~l 275 (427)
..+.+++.+ +.|-..|-+.. +. +.++..+++++|++.. ++.|.|| .|.+++++-+.+-++..... ++
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~-~vPlsIDg~~~~T~~~eV~eaAleagag~~~l 160 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAV-GVPLVVVGCGDVEKDHEVLEAVAEAAAGENLL 160 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-CSCEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhC-CceEEEECCCCCCCCHHHHHHHHHhcCCCCCe
Confidence 456677777 88999888864 22 2346677788888753 7899999 67777788777777777552 22
Q ss_pred CCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHH---HHHcCCC--cEEEeCCCC--cc--HHHHHHH
Q 014285 276 IPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQK---VMQENLA--SVVNIKLAK--FG--VLGTLQI 346 (427)
Q Consensus 276 ~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~---ll~~~a~--~~i~lk~~~--~G--i~~~~~~ 346 (427)
+..+.. ++++.+..+++ +.+.|+.+= +..+.+-+++ .+....+ +=|++||.. +| +...++.
T Consensus 161 -INsv~~----~~~~~m~~laa----~~g~~vVlm-h~~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~ 230 (323)
T 4djd_D 161 -LGNAEQ----ENYKSLTAACM----VHKHNIIAR-SPLDINICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSI 230 (323)
T ss_dssp -EEEEBT----TBCHHHHHHHH----HHTCEEEEE-CSSCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHH
T ss_pred -EEECCc----ccHHHHHHHHH----HhCCeEEEE-ccchHHHHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHH
Confidence 123333 35678888876 678888772 1113333333 2333334 449999987 34 5555444
Q ss_pred HHHHH--------HcCCcEEEc
Q 014285 347 IKATR--------KSGLHLMID 360 (427)
Q Consensus 347 ~~~A~--------~~gi~~~~~ 360 (427)
.+..+ ..|.++.++
T Consensus 231 l~~ir~~al~~~~~lg~PvL~G 252 (323)
T 4djd_D 231 MERIRLGALQGDKMLSMPVICT 252 (323)
T ss_dssp HHHHHHHHHHTCGGGCSCBEEE
T ss_pred HHHHHHHhhcccccCCCCEEEe
Confidence 43333 579999886
No 170
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=87.66 E-value=4.3 Score=36.86 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHhhcCCcEEEE--eccC----CchhhHHHHHHHHHhCCCcEEEE--eCCCCCCHHHHHHHHHHhhhCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKL--NVGR----NITADFDVLQAIHAVHPHCSFIL--DANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKl--KiG~----~~~~d~~~l~~ir~~~~~~~L~v--DAN~~~s~~~A~~~l~~L~~~~l 275 (427)
....-...+++..+.|+..+.+ .+|. +.+.-.+.++++++..+.+.+.+ .. ..|+.++..+.++.+.+.|.
T Consensus 68 ~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~-~~l~~~~~~~~a~~a~eaGa 146 (225)
T 1mzh_A 68 KTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVET-PYLNEEEIKKAVEICIEAGA 146 (225)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCG-GGCCHHHHHHHHHHHHHHTC
T ss_pred chhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeC-CCCCHHHHHHHHHHHHHhCC
Confidence 3443345567777899999995 4442 33344456788888533444544 32 45899888889999988887
Q ss_pred CCceEeCCC----CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHH
Q 014285 276 IPVLFEQPV----HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATR 351 (427)
Q Consensus 276 ~~~~iEqP~----~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~ 351 (427)
. +|-=-. ..-+++..+.+++.. ..++||...=-+.+..++.++++.+ ++. +|....+++.+-.+
T Consensus 147 d--~I~tstg~~~gga~~~~i~~v~~~v--~~~ipVia~GGI~t~~da~~~l~aG-A~~-------iG~s~~~~i~~~~~ 214 (225)
T 1mzh_A 147 D--FIKTSTGFAPRGTTLEEVRLIKSSA--KGRIKVKASGGIRDLETAISMIEAG-ADR-------IGTSSGISIAEEFL 214 (225)
T ss_dssp S--EEECCCSCSSSCCCHHHHHHHHHHH--TTSSEEEEESSCCSHHHHHHHHHTT-CSE-------EEESCHHHHHHHHH
T ss_pred C--EEEECCCCCCCCCCHHHHHHHHHHh--CCCCcEEEECCCCCHHHHHHHHHhC-chH-------HHHccHHHHHHHHH
Confidence 4 773221 111566677776521 1268997777888999999999876 553 35333455555444
Q ss_pred HcC
Q 014285 352 KSG 354 (427)
Q Consensus 352 ~~g 354 (427)
+.+
T Consensus 215 ~~~ 217 (225)
T 1mzh_A 215 KRH 217 (225)
T ss_dssp HHH
T ss_pred hcc
Confidence 443
No 171
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=87.04 E-value=7.9 Score=34.47 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=71.1
Q ss_pred HHHHHhhcCCcEEEEeccC--Cc-hhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE--eCCC-
Q 014285 211 LASKYCKLGFSTLKLNVGR--NI-TADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF--EQPV- 284 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~--~~-~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i--EqP~- 284 (427)
+++.+.+.|...+-+-... ++ +.-.+.++.+|+.+|+..+.+|.+ +++++.+. .+.+.. +| --+.
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~---t~~e~~~~----~~~G~d--~i~~~~~g~ 150 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA---TVEEAKNA----ARLGFD--YIGTTLHGY 150 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS---SHHHHHHH----HHTTCS--EEECTTTTS
T ss_pred HHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC---CHHHHHHH----HHcCCC--EEEeCCCcC
Confidence 3445567898888776543 22 233577899999878888888875 67776553 333432 23 1110
Q ss_pred ---------CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 285 ---------HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 285 ---------~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
...+++.++++++ ..++||..+=-+.+..++.++++.+ ++.+.+=
T Consensus 151 t~~~~~~~~~~~~~~~~~~~~~----~~~ipvia~GGI~~~~~~~~~~~~G-ad~v~vG 204 (223)
T 1y0e_A 151 TSYTQGQLLYQNDFQFLKDVLQ----SVDAKVIAEGNVITPDMYKRVMDLG-VHCSVVG 204 (223)
T ss_dssp STTSTTCCTTHHHHHHHHHHHH----HCCSEEEEESSCCSHHHHHHHHHTT-CSEEEEC
T ss_pred cCCCCCCCCCcccHHHHHHHHh----hCCCCEEEecCCCCHHHHHHHHHcC-CCEEEEC
Confidence 1112344555554 4689999888888999999999986 7777663
No 172
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=86.79 E-value=5.4 Score=40.54 Aligned_cols=117 Identities=20% Similarity=0.264 Sum_probs=79.5
Q ss_pred HHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEe----
Q 014285 207 EASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE---- 281 (427)
Q Consensus 207 ~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iE---- 281 (427)
+..+.++.+++.|+..+-+.... .+....+.++.+|+..|++.+.+- +..+.++|... .+.+.. +|-
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g--~~~t~e~a~~l----~~~G~d--~I~v~~~ 308 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG--NVATPEGTEAL----IKAGAD--AVKVGVG 308 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE--EECSHHHHHHH----HHTTCS--EEEECSS
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC--CcCCHHHHHHH----HHcCCC--EEEEcCC
Confidence 34567778889999999886653 456678899999998777777662 45678887443 344543 332
Q ss_pred ----------CCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 282 ----------QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 282 ----------qP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
......++..+..+++.+ +..++||..+=-+.+..++.+++..+ ++.+++
T Consensus 309 ~G~~~~~~~~~~~g~p~~~~l~~v~~~~-~~~~ipvia~GGI~~~~di~kala~G-Ad~V~i 368 (494)
T 1vrd_A 309 PGSICTTRVVAGVGVPQLTAVMECSEVA-RKYDVPIIADGGIRYSGDIVKALAAG-AESVMV 368 (494)
T ss_dssp CSTTCHHHHHHCCCCCHHHHHHHHHHHH-HTTTCCEEEESCCCSHHHHHHHHHTT-CSEEEE
T ss_pred CCccccccccCCCCccHHHHHHHHHHHH-hhcCCCEEEECCcCCHHHHHHHHHcC-CCEEEE
Confidence 111112344455554322 23589999999999999999999987 788774
No 173
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=86.58 E-value=1.7 Score=39.80 Aligned_cols=153 Identities=9% Similarity=0.067 Sum_probs=87.5
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCC-cEEEEeCC---C-------CCCH-
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPH-CSFILDAN---E-------GYTS- 260 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~-~~L~vDAN---~-------~~s~- 260 (427)
+|+-...++.++++ ++++.+.|-..+ -+|...-.+.+.+..+++ .+++ +.+.+|+. + +|..
T Consensus 75 ipvi~~ggI~~~~~----~~~~~~~Gad~V--~lg~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~ 148 (253)
T 1thf_D 75 IPFTVGGGIHDFET----ASELILRGADKV--SINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKN 148 (253)
T ss_dssp SCEEEESSCCSHHH----HHHHHHTTCSEE--EESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEE
T ss_pred CCEEEeCCCCCHHH----HHHHHHcCCCEE--EEChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccc
Confidence 45545555667765 444556786644 455422233445666655 4543 56889984 3 2421
Q ss_pred --HHHHHHHHHhhhCCCCCceEeCCCC------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEE
Q 014285 261 --EEAVEVLGKLNDMGVIPVLFEQPVH------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVN 332 (427)
Q Consensus 261 --~~A~~~l~~L~~~~l~~~~iEqP~~------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~ 332 (427)
....+.++.+.+.++....+ -.+. .-+++.++++++ .+++||..+=-+.+..++.++++.+ ++.+.
T Consensus 149 ~~~~~~e~~~~~~~~G~~~i~~-~~~~~~g~~~g~~~~~~~~l~~----~~~ipvia~GGI~~~~d~~~~~~~G-adgv~ 222 (253)
T 1thf_D 149 TGILLRDWVVEVEKRGAGEILL-TSIDRDGTKSGYDTEMIRFVRP----LTTLPIIASGGAGKMEHFLEAFLAG-ADAAL 222 (253)
T ss_dssp EEEEHHHHHHHHHHTTCSEEEE-EETTTTTSCSCCCHHHHHHHGG----GCCSCEEEESCCCSHHHHHHHHHTT-CSEEE
T ss_pred cCCCHHHHHHHHHHCCCCEEEE-EeccCCCCCCCCCHHHHHHHHH----hcCCCEEEECCCCCHHHHHHHHHcC-ChHHH
Confidence 12234455555555431122 1111 125778888874 5789999887888899999999754 67766
Q ss_pred eCCCCcc-HHHHHHHHHHHHHcCCcEE
Q 014285 333 IKLAKFG-VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 333 lk~~~~G-i~~~~~~~~~A~~~gi~~~ 358 (427)
+=-..++ -....+..+..++.|+++-
T Consensus 223 vGsal~~~~~~~~~~~~~l~~~g~~~~ 249 (253)
T 1thf_D 223 AASVFHFREIDVRELKEYLKKHGVNVR 249 (253)
T ss_dssp ESHHHHTTCSCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHcCCCCHHHHHHHHHHcCCccc
Confidence 5433332 1124455666778888764
No 174
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=86.26 E-value=14 Score=36.98 Aligned_cols=112 Identities=13% Similarity=-0.023 Sum_probs=78.4
Q ss_pred eeeeeee--cCCCHHHHHHHHHHHhhcCCcEEEEec--------c-------CCchhhHHHHHHHHHh----CCCc--EE
Q 014285 194 LSTAITI--PAVSPAEASELASKYCKLGFSTLKLNV--------G-------RNITADFDVLQAIHAV----HPHC--SF 250 (427)
Q Consensus 194 ip~~~~i--~~~~~~~~~~~~~~~~~~Gf~~iKlKi--------G-------~~~~~d~~~l~~ir~~----~~~~--~L 250 (427)
+|+.+-+ +.+++..+.+.++.+.+.|.-.+-|-= | .+.++-+++|+++|+. +++. .-
T Consensus 153 ~PviaD~dtGfG~~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiA 232 (439)
T 3i4e_A 153 APIVADAEAGFGGVLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVA 232 (439)
T ss_dssp CCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeEEECCCCCCccHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 6654443 334666677788888999998887742 1 1456778899988862 5664 34
Q ss_pred EEeCCCC----------------------------CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccc
Q 014285 251 ILDANEG----------------------------YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDT 302 (427)
Q Consensus 251 ~vDAN~~----------------------------~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~ 302 (427)
|.|+..+ ...++|++.+++..+ +-...|+|-+.+ +.+.++++++.++..
T Consensus 233 RTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~--~~eei~~f~~~v~~~ 309 (439)
T 3i4e_A 233 RTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKP--DLEYAKKFAEAIHKQ 309 (439)
T ss_dssp EECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSC--CHHHHHHHHHHHHHH
T ss_pred EcCcccccccccccccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCC--CHHHHHHHHHHhccc
Confidence 8999653 458999999999988 655569988775 678889998765433
Q ss_pred cCCeEE
Q 014285 303 YGISVV 308 (427)
Q Consensus 303 ~~iPIa 308 (427)
.++++.
T Consensus 310 ~P~~~l 315 (439)
T 3i4e_A 310 FPGKLL 315 (439)
T ss_dssp STTCEE
T ss_pred CCceEE
Confidence 455443
No 175
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=85.16 E-value=5.3 Score=37.13 Aligned_cols=92 Identities=13% Similarity=0.088 Sum_probs=66.8
Q ss_pred HHHHHHHhhcCCcEEEEeccC--------CchhhHHHHHHHHHh----CCC--cEEEEeCC-CCC-----CHHHHHHHHH
Q 014285 209 SELASKYCKLGFSTLKLNVGR--------NITADFDVLQAIHAV----HPH--CSFILDAN-EGY-----TSEEAVEVLG 268 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~--------~~~~d~~~l~~ir~~----~~~--~~L~vDAN-~~~-----s~~~A~~~l~ 268 (427)
.+.++++.+.|-..+|+--|. +.++=.++|+++++. +.+ +.=|.|+. ++. ..+++++.++
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~ 175 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIK 175 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHH
Confidence 566777888999999998662 345667889888875 766 55578873 222 2789999999
Q ss_pred HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeE
Q 014285 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISV 307 (427)
Q Consensus 269 ~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPI 307 (427)
++++.|-...|+|-+ + +.+..+++++ ..++|+
T Consensus 176 a~~eAGAd~i~~e~~-~--~~~~~~~i~~----~~~~P~ 207 (255)
T 2qiw_A 176 LMEQAGARSVYPVGL-S--TAEQVERLVD----AVSVPV 207 (255)
T ss_dssp HHHHHTCSEEEECCC-C--SHHHHHHHHT----TCSSCB
T ss_pred HHHHcCCcEEEEcCC-C--CHHHHHHHHH----hCCCCE
Confidence 999987665689875 2 3567788886 455665
No 176
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=84.82 E-value=18 Score=33.99 Aligned_cols=146 Identities=11% Similarity=0.114 Sum_probs=82.8
Q ss_pred HHHHHhhcCCcEEEEecc-----------CCchhhHHHH----HHHHHhCCCcE--EE--EeCC--CCCCHHHHHHHHHH
Q 014285 211 LASKYCKLGFSTLKLNVG-----------RNITADFDVL----QAIHAVHPHCS--FI--LDAN--EGYTSEEAVEVLGK 269 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG-----------~~~~~d~~~l----~~ir~~~~~~~--L~--vDAN--~~~s~~~A~~~l~~ 269 (427)
.+++..+.|++.+-+-+. .+.++.++++ +..++.+-.++ |. +++. ...+++++.++++.
T Consensus 84 ~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~ 163 (295)
T 1ydn_A 84 GYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQ 163 (295)
T ss_dssp HHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 345566789998888753 3455666664 33344443333 22 3322 35689999999998
Q ss_pred hhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC-CeEEecC---CCCCHHHHHHHHHcCCCcEEEeCCC---------
Q 014285 270 LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG-ISVVADE---SCRSLNDVQKVMQENLASVVNIKLA--------- 336 (427)
Q Consensus 270 L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~-iPIa~dE---~~~~~~~~~~ll~~~a~~~i~lk~~--------- 336 (427)
+.+.+.....+=+..-........++-+.+++..+ +||...= .-.........++.+ ++.++.-..
T Consensus 164 ~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG-~~~vd~sv~GlG~cp~a~ 242 (295)
T 1ydn_A 164 LFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKG-LRVFDASVGGLGGCPFAP 242 (295)
T ss_dssp HHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHT-CCEEEEBTTCCSCBTTBT
T ss_pred HHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhC-CCEEEeccccCCCCCCCC
Confidence 88888654456666554455555555555555665 7776531 222333446666665 556555331
Q ss_pred -CccHHHHHHHHHHHHHcCCcE
Q 014285 337 -KFGVLGTLQIIKATRKSGLHL 357 (427)
Q Consensus 337 -~~Gi~~~~~~~~~A~~~gi~~ 357 (427)
+.|-..+..++...+..|+..
T Consensus 243 g~~GN~~~e~lv~~l~~~g~~~ 264 (295)
T 1ydn_A 243 GAKGNVDTVAVVEMLHEMGFET 264 (295)
T ss_dssp TSCCBCBHHHHHHHHHHTTCBC
T ss_pred CCcCChhHHHHHHHHHhcCCCC
Confidence 334222444555556666543
No 177
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=84.57 E-value=2.9 Score=38.58 Aligned_cols=159 Identities=11% Similarity=0.059 Sum_probs=74.2
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCC-chh--hHHHHHHHHHh-C--C-CcEEEEeC---CC-------
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRN-ITA--DFDVLQAIHAV-H--P-HCSFILDA---NE------- 256 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~-~~~--d~~~l~~ir~~-~--~-~~~L~vDA---N~------- 256 (427)
+|+-...++.+++++. ++.+.|.. .+-+|.. ++. +.+.++.+.+. + . .+.+.+|+ ++
T Consensus 75 iPvi~~ggi~~~~~i~----~~~~~Gad--~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~ 148 (266)
T 2w6r_A 75 LPIIASGGAGKMEHFL----EAFLAGAD--KALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTH 148 (266)
T ss_dssp SCEEEESCCCSTHHHH----HHHHHTCS--EEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEET
T ss_pred CCEEEECCCCCHHHHH----HHHHcCCc--HhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEEC
Confidence 4544444556666643 33345644 4455543 223 55666666543 4 2 45688887 33
Q ss_pred CCCH---HHHHHHHHHhhhCCCCCceEeCCCC------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCC
Q 014285 257 GYTS---EEAVEVLGKLNDMGVIPVLFEQPVH------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327 (427)
Q Consensus 257 ~~s~---~~A~~~l~~L~~~~l~~~~iEqP~~------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a 327 (427)
+|.. ....++++.+.+.+....++ ..+. .-+++.++++++ .+++||...=-+.+..++.++++.+
T Consensus 149 g~~~~~~~~~~e~~~~~~~~G~~~i~~-t~~~~~g~~~g~~~~~i~~l~~----~~~ipvia~GGI~~~ed~~~~~~~G- 222 (266)
T 2w6r_A 149 SGKKNTGILLRDWVVEVEKRGAGEILL-TSIDRDGTKSGYDTEMIRFVRP----LTTLPIIASGGAGKMEHFLEAFLAG- 222 (266)
T ss_dssp TTTEEEEEEHHHHHHHHHHTTCSEEEE-EETTTTTTCSCCCHHHHHHHGG----GCCSCEEEESCCCSHHHHHHHHHHT-
T ss_pred CCceecchhHHHHHHHHHHcCCCEEEE-EeecCCCCcCCCCHHHHHHHHH----HcCCCEEEeCCCCCHHHHHHHHHcC-
Confidence 2320 11234445555555432233 1211 125777778765 5789999887888899999999765
Q ss_pred CcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccCc
Q 014285 328 ASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMIE 364 (427)
Q Consensus 328 ~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~e 364 (427)
++.+.+=-..++ -....++.+..+++|+++-.-..+|
T Consensus 223 adgv~vgsal~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 260 (266)
T 2w6r_A 223 ADAALAASVFHFREIDMRELKEYLKKHGVNVRLEGLLE 260 (266)
T ss_dssp CSEEEESTTTC---------------------------
T ss_pred CHHHHccHHHHcCCCCHHHHHHHHHHCCCcccccchhh
Confidence 677777666664 3345566677788888765443333
No 178
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=82.35 E-value=12 Score=34.96 Aligned_cols=146 Identities=13% Similarity=0.146 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH----HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC-CCc
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVL----QAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGV-IPV 278 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l----~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l-~~~ 278 (427)
+.+...+.+++++++|-..+-+-.+...+++.+++ ++|++.. ++.|.||.- +++-+..-++.....++ ...
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~-~~pisIDT~---~~~v~~aal~a~~Ga~iINdv 107 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV-DLPCCLDST---NPDAIEAGLKVHRGHAMINST 107 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC-CCCEEEECS---CHHHHHHHHHHCCSCCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC-CCeEEEeCC---CHHHHHHHHHhCCCCCEEEEC
Confidence 56778889999999999998888876555566655 4455433 788999965 66766666666543332 011
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCCeEEe---cCC--CCCHH----HH----HHHHHcCC-CcEEEeCCCC--cc--H
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGISVVA---DES--CRSLN----DV----QKVMQENL-ASVVNIKLAK--FG--V 340 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~---dE~--~~~~~----~~----~~ll~~~a-~~~i~lk~~~--~G--i 340 (427)
+-+ .++++.+..+++ +.+.|+.+ ||. -.+.. .+ ..+.+.+- .+=|.+||.. +| .
T Consensus 108 s~~----~d~~~~~~~~~a----~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~ 179 (271)
T 2yci_X 108 SAD----QWKMDIFFPMAK----KYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQ 179 (271)
T ss_dssp CSC----HHHHHHHHHHHH----HHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTST
T ss_pred CCC----ccccHHHHHHHH----HcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCH
Confidence 222 133567777775 56777765 432 12222 22 22333331 2248889974 24 4
Q ss_pred H---HHHHHHHHHHHcC---CcEEEcc
Q 014285 341 L---GTLQIIKATRKSG---LHLMIDG 361 (427)
Q Consensus 341 ~---~~~~~~~~A~~~g---i~~~~~s 361 (427)
. ..++-++..++.+ .++.++-
T Consensus 180 ~~~~~~l~~l~~~~~~~~p~~p~l~G~ 206 (271)
T 2yci_X 180 EHAVEVLETIRQIKLMANPAPRTVLGL 206 (271)
T ss_dssp HHHHHHHHHHHHHTTSSSSCCEEEEEG
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEee
Confidence 3 4466666666666 8888764
No 179
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=82.20 E-value=26 Score=30.82 Aligned_cols=149 Identities=16% Similarity=0.216 Sum_probs=86.1
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhC
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDM 273 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~ 273 (427)
.|+..++...+++++.+.++++.+.|.+.+-+.... ....+.++.+++.++ +.++|-+..-.+.++ ++...+.
T Consensus 7 ~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~--~~~~~~i~~i~~~~~-~~l~vg~g~~~~~~~----i~~a~~~ 79 (212)
T 2v82_A 7 LPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNS--PQWEQSIPAIVDAYG-DKALIGAGTVLKPEQ----VDALARM 79 (212)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTS--TTHHHHHHHHHHHHT-TTSEEEEECCCSHHH----HHHHHHT
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCC--hhHHHHHHHHHHhCC-CCeEEEeccccCHHH----HHHHHHc
Confidence 445556666788899999999999999999886542 233566676666433 345554334455553 3333344
Q ss_pred CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHc
Q 014285 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKS 353 (427)
Q Consensus 274 ~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~ 353 (427)
+.. ++=-| ..+.+ +.+.++ +.+.++..+ +.+..++.+..+. .+|++.+.++. ..+...+.++++..
T Consensus 80 Gad--~V~~~--~~~~~-~~~~~~----~~g~~~~~g--~~t~~e~~~a~~~-G~d~v~v~~t~--~~g~~~~~~l~~~~ 145 (212)
T 2v82_A 80 GCQ--LIVTP--NIHSE-VIRRAV----GYGMTVCPG--CATATEAFTALEA-GAQALKIFPSS--AFGPQYIKALKAVL 145 (212)
T ss_dssp TCC--EEECS--SCCHH-HHHHHH----HTTCEEECE--ECSHHHHHHHHHT-TCSEEEETTHH--HHCHHHHHHHHTTS
T ss_pred CCC--EEEeC--CCCHH-HHHHHH----HcCCCEEee--cCCHHHHHHHHHC-CCCEEEEecCC--CCCHHHHHHHHHhc
Confidence 443 44322 22333 333332 457776665 7788888777765 48998875532 12223333444444
Q ss_pred C--CcEEEcccC
Q 014285 354 G--LHLMIDGMI 363 (427)
Q Consensus 354 g--i~~~~~s~~ 363 (427)
+ ++++..+-+
T Consensus 146 ~~~ipvia~GGI 157 (212)
T 2v82_A 146 PSDIAVFAVGGV 157 (212)
T ss_dssp CTTCEEEEESSC
T ss_pred cCCCeEEEeCCC
Confidence 4 888876533
No 180
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=82.14 E-value=15 Score=35.43 Aligned_cols=158 Identities=9% Similarity=0.032 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH-HHHHHhCCCcE----EEEe---CCC-------CCCHHHHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVL-QAIHAVHPHCS----FILD---ANE-------GYTSEEAVEVLG 268 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l-~~ir~~~~~~~----L~vD---AN~-------~~s~~~A~~~l~ 268 (427)
+.++..+.++.+++.|++.|-.=-.-......+.| ++++..-.++. +... .++ .++++...+-++
T Consensus 50 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e 129 (348)
T 3n2t_A 50 DDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVE 129 (348)
T ss_dssp THHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHSCCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhhCCCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHH
Confidence 45677788888899999987643211111223333 44443222332 2111 111 256665544332
Q ss_pred -HhhhCC---CCCceEeCCCCCC----ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccH
Q 014285 269 -KLNDMG---VIPVLFEQPVHRD----DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGV 340 (427)
Q Consensus 269 -~L~~~~---l~~~~iEqP~~~~----d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi 340 (427)
.|+.++ +.++++-.|-+.. -|+.|.+|.+ .+.==+.|=|.++...++++++...++++|+..+..--
T Consensus 130 ~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~ 204 (348)
T 3n2t_A 130 DSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQ-----DGKIRALGVSNFSPEQMDIFREVAPLATIQPPLNLFER 204 (348)
T ss_dssp HHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHH-----TTSEEEEEEESCCHHHHHHHHHHSCCCEEECBCBTTBC
T ss_pred HHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHH-----hCcceEEecCCCCHHHHHHHHHhCCccEEEeeecCccC
Confidence 233332 2224555565432 2455566653 34434556677899999999998889999988776531
Q ss_pred HHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 341 LGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 341 ~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
..-.+++.+|+++||.++..+.+.+|
T Consensus 205 ~~e~~l~~~~~~~gi~v~a~spL~~G 230 (348)
T 3n2t_A 205 TIEKDILPYAEKHNAVVLAYGALCRG 230 (348)
T ss_dssp GGGGTHHHHHHHHTCEEEEBCTTGGG
T ss_pred chHHHHHHHHHHcCCeEEEeecccCc
Confidence 11246789999999999998877654
No 181
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=82.02 E-value=10 Score=33.31 Aligned_cols=92 Identities=21% Similarity=0.187 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh-hhHHHHHHhhcccc--CCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW-SGLHDVSNFARDTY--GISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~-~~~~~L~~~~r~~~--~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
.+.+++.+.++.+.+.++. +||=-+...+. +.++++++ .. +.+|..+ ++.+..+++.+++.+ +|++ +-
T Consensus 19 ~~~~~~~~~~~~~~~~G~~--~iev~~~~~~~~~~i~~ir~----~~~~~~~ig~~-~v~~~~~~~~a~~~G-ad~i-v~ 89 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVH--LIEITFTVPDADTVIKELSF----LKEKGAIIGAG-TVTSVEQCRKAVESG-AEFI-VS 89 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCC--EEEEETTSTTHHHHHHHTHH----HHHTTCEEEEE-SCCSHHHHHHHHHHT-CSEE-EC
T ss_pred CCHHHHHHHHHHHHHCCCC--EEEEeCCChhHHHHHHHHHH----HCCCCcEEEec-ccCCHHHHHHHHHcC-CCEE-Ec
Confidence 3688999999999998875 78743333232 23455543 33 4777776 467888888888765 8998 55
Q ss_pred CCCccHHHHHHHHHHHHHcCCcEEEcccC
Q 014285 335 LAKFGVLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 335 ~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
+... .++++.|+++|++++++...
T Consensus 90 ~~~~-----~~~~~~~~~~g~~vi~g~~t 113 (205)
T 1wa3_A 90 PHLD-----EEISQFCKEKGVFYMPGVMT 113 (205)
T ss_dssp SSCC-----HHHHHHHHHHTCEEECEECS
T ss_pred CCCC-----HHHHHHHHHcCCcEECCcCC
Confidence 5432 35778889999999987643
No 182
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=81.99 E-value=45 Score=33.57 Aligned_cols=164 Identities=12% Similarity=0.164 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCC--------chhhHHHHHHHHHhCCCcEEEEeC---CC-CCC--HHHH-HHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRN--------ITADFDVLQAIHAVHPHCSFILDA---NE-GYT--SEEA-VEVLG 268 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~--------~~~d~~~l~~ir~~~~~~~L~vDA---N~-~~s--~~~A-~~~l~ 268 (427)
+.+++.+.++.+.+.|+..|-+-.|.. -+.|.++++.+++..++..+.+=. |. +|+ ++++ ...++
T Consensus 28 ~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~ 107 (464)
T 2nx9_A 28 RIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVE 107 (464)
T ss_dssp CGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHH
Confidence 456666777888889999999976542 256889999999866665554333 32 343 2333 45666
Q ss_pred HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEE-----ecCCCCCHHHH----HHHHHcCCCcEEEeCCCC-c
Q 014285 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVV-----ADESCRSLNDV----QKVMQENLASVVNIKLAK-F 338 (427)
Q Consensus 269 ~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa-----~dE~~~~~~~~----~~ll~~~a~~~i~lk~~~-~ 338 (427)
+..+.++. .|-=-.+..+.+.+....+.++ +.+..+- .|-.-+++..+ +++.+.+ ++.|.++=+. .
T Consensus 108 ~a~~~Gvd--~i~if~~~sd~~ni~~~i~~ak-~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G-ad~I~l~DT~G~ 183 (464)
T 2nx9_A 108 RAVKNGMD--VFRVFDAMNDVRNMQQALQAVK-KMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELG-VDSIALKDMAGI 183 (464)
T ss_dssp HHHHTTCC--EEEECCTTCCTHHHHHHHHHHH-HTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTT-CSEEEEEETTSC
T ss_pred HHHhCCcC--EEEEEEecCHHHHHHHHHHHHH-HCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCC-CCEEEEcCCCCC
Confidence 66666654 3332233345565655554443 3455542 23334455543 4455554 6777775443 3
Q ss_pred c-HHHHHHHHHHH-HHcCCcEEEcccCchhHHHHH
Q 014285 339 G-VLGTLQIIKAT-RKSGLHLMIDGMIETRLATGF 371 (427)
Q Consensus 339 G-i~~~~~~~~~A-~~~gi~~~~~s~~es~ig~~a 371 (427)
+ .....++++.. ++.++++-+|+-...|++.+.
T Consensus 184 ~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN 218 (464)
T 2nx9_A 184 LTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMT 218 (464)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHH
Confidence 3 55566666554 445899999987666666554
No 183
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=81.83 E-value=14 Score=35.23 Aligned_cols=145 Identities=12% Similarity=0.084 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhhcCCcEEEEecc---C-----CchhhHHHHHHHHHhCCCcEEEE-eC-CCCCCHHHHHHHHHHhhhCC-
Q 014285 206 AEASELASKYCKLGFSTLKLNVG---R-----NITADFDVLQAIHAVHPHCSFIL-DA-NEGYTSEEAVEVLGKLNDMG- 274 (427)
Q Consensus 206 ~~~~~~~~~~~~~Gf~~iKlKiG---~-----~~~~d~~~l~~ir~~~~~~~L~v-DA-N~~~s~~~A~~~l~~L~~~~- 274 (427)
+...+.+++++++|-..|-+... + +.+++.+.++.+++.. ++.|.| |. |.-++++-+.+-++...+-.
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT~~~~~~~~V~eaal~aga~~k~ 152 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGCGVEEKDAEIFPVIGEALSGRNC 152 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECCCCCCCCHHHHHHHHHhCCCCCC
Confidence 45567788888999999988873 1 3466788899998864 789999 98 66688887777777766511
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHH---HHcCCC--cEEEeCCCCc--c--HHHH--
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKV---MQENLA--SVVNIKLAKF--G--VLGT-- 343 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~l---l~~~a~--~~i~lk~~~~--G--i~~~-- 343 (427)
+ +..+ ..++++.+..+++ +.+.|+.+-=. .+.+.++++ +....+ +=|++||..- | +..+
T Consensus 153 i-INdv----s~~~~~~~~~~aa----~~g~~vv~m~~-~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g~~~e~~~~ 222 (310)
T 2h9a_B 153 L-LSSA----TKDNYKPIVATCM----VHGHSVVASAP-LDINLSKQLNIMIMEMNLAPNRIIMDPLIGALGYGIEYSYS 222 (310)
T ss_dssp E-EEEE----CTTTHHHHHHHHH----HHTCEEEEECS-SCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHH
T ss_pred E-EEEC----CCCccHHHHHHHH----HhCCCEEEECh-hHHHHHHHHHHHHHHCCCChhhEEEeCCCccccCchHhHHH
Confidence 1 1122 2236788888876 67888876321 134444332 222223 4589999752 4 3244
Q ss_pred -HHHHHHH-----HHcCCcEEEcc
Q 014285 344 -LQIIKAT-----RKSGLHLMIDG 361 (427)
Q Consensus 344 -~~~~~~A-----~~~gi~~~~~s 361 (427)
++.++.+ +..|.|+.++-
T Consensus 223 ~l~~ir~~al~~~~~lg~P~l~g~ 246 (310)
T 2h9a_B 223 IIERMRLGALTGDKILAMPVVCFI 246 (310)
T ss_dssp HHHHHHHHHHTTCGGGCSCBEECH
T ss_pred HHHHHHHhhhhhhhcCCCCEEEEc
Confidence 4444442 33688887764
No 184
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=81.64 E-value=3.1 Score=37.96 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=86.1
Q ss_pred ceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHh-CCC-cEEEEeCC---C-------CCCH
Q 014285 193 SLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAV-HPH-CSFILDAN---E-------GYTS 260 (427)
Q Consensus 193 ~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~-~~~-~~L~vDAN---~-------~~s~ 260 (427)
.+|+-...++.+++++ +++++.|... +-+|...-.+-+.++.+++. +++ +.+.+|++ + +|..
T Consensus 75 ~iPvi~~Ggi~~~~~~----~~~~~~Gad~--V~lg~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~ 148 (252)
T 1ka9_F 75 FIPLTVGGGVRSLEDA----RKLLLSGADK--VSVNSAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRV 148 (252)
T ss_dssp CSCEEEESSCCSHHHH----HHHHHHTCSE--EEECHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTE
T ss_pred CCCEEEECCcCCHHHH----HHHHHcCCCE--EEEChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCcc
Confidence 3555555566676543 4445667544 44554222334556666664 433 67888984 1 2321
Q ss_pred ---HHHHHHHHHhhhCCCCCceEeCCC------CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEE
Q 014285 261 ---EEAVEVLGKLNDMGVIPVLFEQPV------HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVV 331 (427)
Q Consensus 261 ---~~A~~~l~~L~~~~l~~~~iEqP~------~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i 331 (427)
....+.++.+.+.+.. ..+=-.+ ..-+++.++++++ .+++||...=-+.+..+++++++.+ ++.+
T Consensus 149 ~~~~~~~e~~~~~~~~G~~-~i~~~~~~~~g~~~g~~~~~i~~l~~----~~~ipvia~GGI~~~~d~~~~~~~G-adgv 222 (252)
T 1ka9_F 149 PTGLHAVEWAVKGVELGAG-EILLTSMDRDGTKEGYDLRLTRMVAE----AVGVPVIASGGAGRMEHFLEAFQAG-AEAA 222 (252)
T ss_dssp EEEEEHHHHHHHHHHHTCC-EEEEEETTTTTTCSCCCHHHHHHHHH----HCSSCEEEESCCCSHHHHHHHHHTT-CSEE
T ss_pred ccCCcHHHHHHHHHHcCCC-EEEEecccCCCCcCCCCHHHHHHHHH----HcCCCEEEeCCCCCHHHHHHHHHCC-CHHH
Confidence 1223344444444433 1222122 1225788888875 5789998877788899999998754 6666
Q ss_pred EeCCCCcc-HHHHHHHHHHHHHcCCcE
Q 014285 332 NIKLAKFG-VLGTLQIIKATRKSGLHL 357 (427)
Q Consensus 332 ~lk~~~~G-i~~~~~~~~~A~~~gi~~ 357 (427)
.+=-..++ -....+..+.+++.|+++
T Consensus 223 ~vgsal~~~~~~~~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 223 LAASVFHFGEIPIPKLKRYLAEKGVHV 249 (252)
T ss_dssp EESHHHHTTSSCHHHHHHHHHHTTCCB
T ss_pred HHHHHHHcCCCCHHHHHHHHHHCCCCc
Confidence 65433332 112445556677888765
No 185
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=80.80 E-value=24 Score=35.26 Aligned_cols=116 Identities=11% Similarity=0.005 Sum_probs=78.0
Q ss_pred ceeeeeee--cCCCHHHHHHHHHHHhhcCCcEEEEec--c-------------CCchhhHHHHHHHHHh----CCCcE--
Q 014285 193 SLSTAITI--PAVSPAEASELASKYCKLGFSTLKLNV--G-------------RNITADFDVLQAIHAV----HPHCS-- 249 (427)
Q Consensus 193 ~ip~~~~i--~~~~~~~~~~~~~~~~~~Gf~~iKlKi--G-------------~~~~~d~~~l~~ir~~----~~~~~-- 249 (427)
.+|+.+-+ +.+++..+.+.++.+.+.|--.+-|-= + .+.++-+++|++.|+. +++.-
T Consensus 145 ~lPIiaD~DtGfG~~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIi 224 (433)
T 3eol_A 145 FAPIVADAEAGFGDPLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIV 224 (433)
T ss_dssp CCCEEEECC---CCHHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCCeEEECCCCCCCcHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 46654433 334666677778888899988877642 1 1456778899888863 56644
Q ss_pred EEEeCCCC------------------------------CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhh
Q 014285 250 FILDANEG------------------------------YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFA 299 (427)
Q Consensus 250 L~vDAN~~------------------------------~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~ 299 (427)
-|-|+..+ ...++|++.+++..+ +-...|+|-+.+ +.++++++++.+
T Consensus 225 ARTDA~~a~l~~s~~d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~~~--~~eei~~f~~~v 301 (433)
T 3eol_A 225 ARTDAEAAKLLTSDIDERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETSKP--DLAQARRFAEAV 301 (433)
T ss_dssp EEECTTTCCEESCCCSTTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCSSC--CHHHHHHHHHHH
T ss_pred EEcCCccccccccCcccccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCCCC--CHHHHHHHHHHh
Confidence 48998652 458999999999888 555569998765 678888888755
Q ss_pred ccccCCe-EEecC
Q 014285 300 RDTYGIS-VVADE 311 (427)
Q Consensus 300 r~~~~iP-Ia~dE 311 (427)
+...+.+ ++.+-
T Consensus 302 ~~~~P~~~L~~~~ 314 (433)
T 3eol_A 302 HKAHPGKLLAYNC 314 (433)
T ss_dssp HHHSTTCCEEEEC
T ss_pred cccCCCcccccCC
Confidence 4334443 34443
No 186
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=80.64 E-value=8.7 Score=34.76 Aligned_cols=132 Identities=16% Similarity=0.168 Sum_probs=76.3
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCC------CCCCH--HHHH
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDAN------EGYTS--EEAV 264 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN------~~~s~--~~A~ 264 (427)
+|+-...++.++++ ++.+++.|-..+ -+|...-.+.+.+..+++ .+..+.+.+|+. .+|.. .+..
T Consensus 76 ipv~v~ggI~~~~~----~~~~l~~Gad~V--~lg~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~ 149 (244)
T 1vzw_A 76 IKVELSGGIRDDDT----LAAALATGCTRV--NLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLY 149 (244)
T ss_dssp SEEEEESSCCSHHH----HHHHHHTTCSEE--EECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHH
T ss_pred CcEEEECCcCCHHH----HHHHHHcCCCEE--EECchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHH
Confidence 45444555667765 445566786654 445322234455655554 455677888875 23410 0233
Q ss_pred HHHHHhhhCCCCCceEe---C--CCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcC--CCcEEEeCC
Q 014285 265 EVLGKLNDMGVIPVLFE---Q--PVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN--LASVVNIKL 335 (427)
Q Consensus 265 ~~l~~L~~~~l~~~~iE---q--P~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~--a~~~i~lk~ 335 (427)
+.++.+.+.++....+- . ....-+++.++++++ ..++||..+=-+.+..++.++++.. .++.+.+=-
T Consensus 150 e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~----~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 150 ETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCA----ATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp HHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHH----TCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHH----hcCCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 44455555554322221 1 111236788888875 5789999988888899999999873 467666543
No 187
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=80.32 E-value=5 Score=36.32 Aligned_cols=131 Identities=14% Similarity=0.169 Sum_probs=76.5
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCCCcEEEEeCC----------CCCCH--
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHPHCSFILDAN----------EGYTS-- 260 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~~~~L~vDAN----------~~~s~-- 260 (427)
+|+-...++.++++ ++.+++.|-..+ -+|...-.+.+.+..+++ .+..+.+.+|+. .+|..
T Consensus 75 ipv~v~ggi~~~~~----~~~~l~~Gad~V--~lg~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~ 148 (244)
T 2y88_A 75 VQVELSGGIRDDES----LAAALATGCARV--NVGTAALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDG 148 (244)
T ss_dssp SEEEEESSCCSHHH----HHHHHHTTCSEE--EECHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEE
T ss_pred CcEEEECCCCCHHH----HHHHHHcCCCEE--EECchHhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCC
Confidence 45444555667765 445566786654 444322334455665555 455677788875 13410
Q ss_pred HHHHHHHHHhhhCCCCCceE---eC--CCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcC--CCcEEEe
Q 014285 261 EEAVEVLGKLNDMGVIPVLF---EQ--PVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN--LASVVNI 333 (427)
Q Consensus 261 ~~A~~~l~~L~~~~l~~~~i---Eq--P~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~--a~~~i~l 333 (427)
.+..+.++.+.++++....+ .. -...-+++.++++++ ..++||..+=-+.+..++.++++.. .++.+.+
T Consensus 149 ~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~----~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 149 GDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVAD----RTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp EEHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHT----TCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHH----hCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEE
Confidence 02344555555555432222 11 111236778888874 5789999988888899999998762 4676665
Q ss_pred C
Q 014285 334 K 334 (427)
Q Consensus 334 k 334 (427)
=
T Consensus 225 G 225 (244)
T 2y88_A 225 G 225 (244)
T ss_dssp C
T ss_pred c
Confidence 3
No 188
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=79.58 E-value=19 Score=35.88 Aligned_cols=115 Identities=13% Similarity=-0.007 Sum_probs=77.9
Q ss_pred eeeeeee--cCCCHHHHHHHHHHHhhcCCcEEEEec--------c-------CCchhhHHHHHHHHHh----CCCc--EE
Q 014285 194 LSTAITI--PAVSPAEASELASKYCKLGFSTLKLNV--------G-------RNITADFDVLQAIHAV----HPHC--SF 250 (427)
Q Consensus 194 ip~~~~i--~~~~~~~~~~~~~~~~~~Gf~~iKlKi--------G-------~~~~~d~~~l~~ir~~----~~~~--~L 250 (427)
+|+..-+ +.+++..+.+.++.+.+.|...+-|-= | .+.++-+++|+++|+. ++++ .-
T Consensus 153 lPviaD~DtGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiA 232 (435)
T 3lg3_A 153 LPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIA 232 (435)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CCeEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 6654443 334566667778888889988887742 1 1456678889888752 5664 44
Q ss_pred EEeCCCC----------------------------CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccc
Q 014285 251 ILDANEG----------------------------YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDT 302 (427)
Q Consensus 251 ~vDAN~~----------------------------~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~ 302 (427)
|.|+..+ ...++|++.+++..+ +-...|+|-+.+ +.++++++++.++..
T Consensus 233 RTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~--~~~ei~~f~~~v~~~ 309 (435)
T 3lg3_A 233 RTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTP--DLALAKRFADAVHAQ 309 (435)
T ss_dssp EECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSC--CHHHHHHHHHHHHHH
T ss_pred EcCCccccccccccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCC--CHHHHHHHHHHhccc
Confidence 8998653 568999999999988 655569997655 678888888765433
Q ss_pred cCCe-EEecC
Q 014285 303 YGIS-VVADE 311 (427)
Q Consensus 303 ~~iP-Ia~dE 311 (427)
.+.. ++.+-
T Consensus 310 ~P~~~La~~~ 319 (435)
T 3lg3_A 310 FPGKLLAYNC 319 (435)
T ss_dssp STTCEEEEEC
T ss_pred cCCeEEEeCC
Confidence 4443 34433
No 189
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=79.51 E-value=16 Score=34.43 Aligned_cols=95 Identities=13% Similarity=0.168 Sum_probs=65.1
Q ss_pred CCCCHHHHHHHHHHhhhCCCCCceEeCCC--CC------CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCC
Q 014285 256 EGYTSEEAVEVLGKLNDMGVIPVLFEQPV--HR------DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327 (427)
Q Consensus 256 ~~~s~~~A~~~l~~L~~~~l~~~~iEqP~--~~------~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a 327 (427)
..++.++.+++++.|++.++. +||.=. .+ .+.+. +.+.+.+..++|++.- +.+..+++++++.+
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gv~--~IE~g~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~l--~~~~~~i~~a~~aG- 96 (302)
T 2ftp_A 25 QPIEVADKIRLVDDLSAAGLD--YIEVGSFVSPKWVPQMAGSAE---VFAGIRQRPGVTYAAL--APNLKGFEAALESG- 96 (302)
T ss_dssp SCCCHHHHHHHHHHHHHTTCS--EEEEEECSCTTTCGGGTTHHH---HHHHSCCCTTSEEEEE--CCSHHHHHHHHHTT-
T ss_pred CCCCHHHHHHHHHHHHHcCcC--EEEECCCcCccccccccCHHH---HHHHhhhcCCCEEEEE--eCCHHHHHHHHhCC-
Confidence 357899999999999999986 899832 11 22222 2222223467788652 25888999999986
Q ss_pred CcEEEe-CCCC------------cc-HHHHHHHHHHHHHcCCcEE
Q 014285 328 ASVVNI-KLAK------------FG-VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 328 ~~~i~l-k~~~------------~G-i~~~~~~~~~A~~~gi~~~ 358 (427)
++.|.+ +.+. -- +..+.+++++|+++|+.+.
T Consensus 97 ~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~ 141 (302)
T 2ftp_A 97 VKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVR 141 (302)
T ss_dssp CCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 666665 4331 12 4567889999999999984
No 190
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=79.23 E-value=46 Score=31.92 Aligned_cols=161 Identities=10% Similarity=0.100 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEe----cc-------CCchhhHHHHHHHHHhCCCcEEEE--eCCCCCCHHHHHHHHHHh
Q 014285 204 SPAEASELASKYCKLGFSTLKLN----VG-------RNITADFDVLQAIHAVHPHCSFIL--DANEGYTSEEAVEVLGKL 270 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlK----iG-------~~~~~d~~~l~~ir~~~~~~~L~v--DAN~~~s~~~A~~~l~~L 270 (427)
+.++..+.++.+.+.|+..|-+- ++ .....+.+.++++++..+++.+.+ ..|.+ .. +.+++.
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~-~~----~~i~~a 102 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIG-SV----HDLKNA 102 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTB-CH----HHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcc-cH----HHHHHH
Confidence 67888888999988999998884 22 223568889999998767766653 33322 22 234444
Q ss_pred hhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEec---CCCCCHHHH----HHHHHcCCCcEEEeCCCC-cc-HH
Q 014285 271 NDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVAD---ESCRSLNDV----QKVMQENLASVVNIKLAK-FG-VL 341 (427)
Q Consensus 271 ~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~d---E~~~~~~~~----~~ll~~~a~~~i~lk~~~-~G-i~ 341 (427)
.+.++. .+==|++..+.+.+.+..+.++ +.++.+... -.-.++..+ +.+.+.+ ++.|.++=+- .. ..
T Consensus 103 ~~aGvd--~v~I~~~~s~~~~~~~~i~~ak-~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~G-a~~i~l~DT~G~~~P~ 178 (345)
T 1nvm_A 103 YQAGAR--VVRVATHCTEADVSKQHIEYAR-NLGMDTVGFLMMSHMIPAEKLAEQGKLMESYG-ATCIYMADSGGAMSMN 178 (345)
T ss_dssp HHHTCC--EEEEEEETTCGGGGHHHHHHHH-HHTCEEEEEEESTTSSCHHHHHHHHHHHHHHT-CSEEEEECTTCCCCHH
T ss_pred HhCCcC--EEEEEEeccHHHHHHHHHHHHH-HCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCC-CCEEEECCCcCccCHH
Confidence 444443 2222344434444444444333 344444332 233445444 3333443 6677665432 23 45
Q ss_pred HHHHHHHHHHH-c--CCcEEEcccCchhHHHHHHH
Q 014285 342 GTLQIIKATRK-S--GLHLMIDGMIETRLATGFAL 373 (427)
Q Consensus 342 ~~~~~~~~A~~-~--gi~~~~~s~~es~ig~~a~~ 373 (427)
...++++..++ . ++++.+|+-...|++.+.++
T Consensus 179 ~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~l 213 (345)
T 1nvm_A 179 DIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSI 213 (345)
T ss_dssp HHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHH
Confidence 56666665554 4 68999998766666665433
No 191
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=78.90 E-value=41 Score=33.53 Aligned_cols=114 Identities=11% Similarity=-0.002 Sum_probs=78.6
Q ss_pred eeeeeee--cCCCHHHHHHHHHHHhhcCCcEEEEec--------c-------CCchhhHHHHHHHHHh----CCCc--EE
Q 014285 194 LSTAITI--PAVSPAEASELASKYCKLGFSTLKLNV--------G-------RNITADFDVLQAIHAV----HPHC--SF 250 (427)
Q Consensus 194 ip~~~~i--~~~~~~~~~~~~~~~~~~Gf~~iKlKi--------G-------~~~~~d~~~l~~ir~~----~~~~--~L 250 (427)
+|+.+-+ +.+++..+.+.++.+.+.|...+-|-= | .+.++-+++|+++|.. +++. --
T Consensus 149 ~PIiaD~DtGfG~~~nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiA 228 (429)
T 1f8m_A 149 APIVADGEAGFGGALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIA 228 (429)
T ss_dssp CCEEEECTTTTSSHHHHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 5654443 334666677888889999998887742 1 1456778899988863 4564 44
Q ss_pred EEeCCCC----------------------------CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccc
Q 014285 251 ILDANEG----------------------------YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDT 302 (427)
Q Consensus 251 ~vDAN~~----------------------------~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~ 302 (427)
|-|+..+ ...++|++.+++..+ +-...|+|-+.+ +.+.++++++.++..
T Consensus 229 RTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~~~--~~eei~~f~~~v~~~ 305 (429)
T 1f8m_A 229 RTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETGTP--DLEAARQFSEAVKAE 305 (429)
T ss_dssp EECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSC--CHHHHHHHHHHHHTT
T ss_pred EechhhhccccccccccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCCCC--CHHHHHHHHHHhccc
Confidence 8899653 468999999999888 444569997665 678889998865433
Q ss_pred cCC-eEEec
Q 014285 303 YGI-SVVAD 310 (427)
Q Consensus 303 ~~i-PIa~d 310 (427)
.+. +++..
T Consensus 306 ~P~~~La~n 314 (429)
T 1f8m_A 306 YPDQMLAYN 314 (429)
T ss_dssp CTTCEEEEE
T ss_pred CCCceeecC
Confidence 344 45544
No 192
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=78.04 E-value=36 Score=31.77 Aligned_cols=154 Identities=10% Similarity=0.115 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH-HHHHHhCCCcEEEEeC---------CCCCCHHHHHHHHH-Hhhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVL-QAIHAVHPHCSFILDA---------NEGYTSEEAVEVLG-KLND 272 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l-~~ir~~~~~~~L~vDA---------N~~~s~~~A~~~l~-~L~~ 272 (427)
+.++..+.++.+++.|++.|-.--.-. ...+.| +++++.-.++-|.-=. ...++++...+-++ .|+.
T Consensus 68 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~r 145 (292)
T 4exb_A 68 DDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLLRGQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKR 145 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHHTTTGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHhccCCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHH
Confidence 456777788888999999875533222 122333 3343311222221111 11356666554443 3444
Q ss_pred CCC---CCceEeCCCC-------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHH
Q 014285 273 MGV---IPVLFEQPVH-------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLG 342 (427)
Q Consensus 273 ~~l---~~~~iEqP~~-------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~ 342 (427)
++. .++++-.|.. .+-|+.|.+|.+ .+.==+.|=|.++...++++++. ++++|+..+..--..
T Consensus 146 Lg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~ 218 (292)
T 4exb_A 146 LETDRIELVLVHSDGNDLDILENSEVYPTLAALKR-----EGLIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE 218 (292)
T ss_dssp TTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHH-----TTSEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT
T ss_pred hCCCceeEEEEecCCCCccccchHHHHHHHHHHHH-----CCCceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH
Confidence 432 2245556621 245677777764 34333455577889999999887 899999877653112
Q ss_pred HHHHHHHHHHcCCcEEEcccCchhH
Q 014285 343 TLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
.+++..|+++||.++.-+.+.++.
T Consensus 219 -~~l~~~~~~~gi~v~a~spL~~G~ 242 (292)
T 4exb_A 219 -RPVIEYAAAHAKGILVKKALASGH 242 (292)
T ss_dssp -HHHHHHHHHTTCEEEEECCSCC--
T ss_pred -HHHHHHHHHCCcEEEEeccccCCc
Confidence 688999999999999988776553
No 193
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=77.62 E-value=45 Score=30.92 Aligned_cols=123 Identities=15% Similarity=0.174 Sum_probs=80.8
Q ss_pred eeecCCCHHHHHHHHHHHhh--cCCcEEEEeccCC----chhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHh
Q 014285 198 ITIPAVSPAEASELASKYCK--LGFSTLKLNVGRN----ITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKL 270 (427)
Q Consensus 198 ~~i~~~~~~~~~~~~~~~~~--~Gf~~iKlKiG~~----~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L 270 (427)
.+-+..+.+|....++-.++ .|-+-||+.|-.| +.+-.+.+++.++. -.+++...-.+.. ....++|
T Consensus 79 NTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd------~~~akrl 152 (265)
T 1wv2_A 79 NTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDD------PIIARQL 152 (265)
T ss_dssp ECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSC------HHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCC------HHHHHHH
Confidence 44566788888776666665 3778999998632 23345556666663 3455555323222 4566777
Q ss_pred hhCCCCCceEeCCCC----C----CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 271 NDMGVIPVLFEQPVH----R----DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 271 ~~~~l~~~~iEqP~~----~----~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
++.+-. .+ .|+. . -+++-++.+++ ..++||..|=-+.++.|+..+++.+ +|.+.+-
T Consensus 153 ~~~G~~--aV-mPlg~pIGsG~Gi~~~~lI~~I~e----~~~vPVI~eGGI~TPsDAa~AmeLG-AdgVlVg 216 (265)
T 1wv2_A 153 AEIGCI--AV-MPLAGLIGSGLGICNPYNLRIILE----EAKVPVLVDAGVGTASDAAIAMELG-CEAVLMN 216 (265)
T ss_dssp HHSCCS--EE-EECSSSTTCCCCCSCHHHHHHHHH----HCSSCBEEESCCCSHHHHHHHHHHT-CSEEEES
T ss_pred HHhCCC--EE-EeCCccCCCCCCcCCHHHHHHHHh----cCCCCEEEeCCCCCHHHHHHHHHcC-CCEEEEC
Confidence 777754 56 3422 2 26667777765 5789999988999999999999986 6666643
No 194
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=76.84 E-value=47 Score=30.68 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccC---CchhhHHHH-HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC-CC
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGR---NITADFDVL-QAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGV-IP 277 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~---~~~~d~~~l-~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l-~~ 277 (427)
.+++...+.+++++++|-..+-+-.|. +.+++++++ ..|++. .++.|.||.. +++.+..-++.....++ ..
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~-~~~pisIDT~---~~~v~~aAl~a~~Ga~iINd 97 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEV-SNLTLCLDST---NIKAIEAGLKKCKNRAMINS 97 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTT-CCSEEEEECS---CHHHHHHHHHHCSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHh-CCCeEEEeCC---CHHHHHHHHhhCCCCCEEEE
Confidence 467888889999999999999888774 345555554 334443 4789999965 66666666665433221 11
Q ss_pred ceEeCCCCCCChhhHHHHHHhhccccCCeEEe---cCC-C-CCHH--------HHHHHHHcCC-CcEEEeCCCC--cc--
Q 014285 278 VLFEQPVHRDDWSGLHDVSNFARDTYGISVVA---DES-C-RSLN--------DVQKVMQENL-ASVVNIKLAK--FG-- 339 (427)
Q Consensus 278 ~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~---dE~-~-~~~~--------~~~~ll~~~a-~~~i~lk~~~--~G-- 339 (427)
.|-+ .++++.|..+++ +.+.|+.+ |+. . .+.+ .+..+.+.+- .+=|++||.. .|
T Consensus 98 vs~~----~d~~~~~~~~~a----~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g~~ 169 (262)
T 1f6y_A 98 TNAE----REKVEKLFPLAV----EHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILPANVA 169 (262)
T ss_dssp ECSC----HHHHHHHHHHHH----HTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCCTTTC
T ss_pred CCCC----cccHHHHHHHHH----HhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCCCcCCCC
Confidence 1322 234557777765 57778765 322 1 1111 1233444442 2358899987 23
Q ss_pred H---HHHHHHHHHHHH-c--CCcEEEcc
Q 014285 340 V---LGTLQIIKATRK-S--GLHLMIDG 361 (427)
Q Consensus 340 i---~~~~~~~~~A~~-~--gi~~~~~s 361 (427)
. ...++-+...++ . |.++.++-
T Consensus 170 ~~~~~~~l~~l~~l~~~~~pg~pvl~G~ 197 (262)
T 1f6y_A 170 QDHAPEVLKTLQQIKMLADPAPKTVLGL 197 (262)
T ss_dssp TTHHHHHHHHHHHHHTCCSSCCEEEEEG
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEee
Confidence 2 356666777776 6 99998874
No 195
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=75.90 E-value=43 Score=33.92 Aligned_cols=132 Identities=17% Similarity=0.204 Sum_probs=85.2
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
+.+...++.. .+..+.++.+.+.|...+-+.... ....-.+.++.+|+.+|++.+.+ ...-+.++|.... +
T Consensus 218 l~v~aavG~~--~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~--g~v~t~e~a~~l~----~ 289 (490)
T 4avf_A 218 LRVGAAVGTG--ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIG--GNIATAEAAKALA----E 289 (490)
T ss_dssp BCCEEEECSS--TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEE--EEECSHHHHHHHH----H
T ss_pred ceeeeeeccc--cchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEE--eeeCcHHHHHHHH----H
Confidence 4444444432 233456777888999999988764 34566788999999888877766 1235677665544 3
Q ss_pred CCCCCceEeC---C-----------CCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 273 MGVIPVLFEQ---P-----------VHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 273 ~~l~~~~iEq---P-----------~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
.+.. +|== | +...++..+.++++.++ ..++||..+=-+.+..|+.+++..+ ++.+++--..
T Consensus 290 aGaD--~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~-~~~iPVIa~GGI~~~~di~kal~~G-Ad~V~vGs~~ 364 (490)
T 4avf_A 290 AGAD--AVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALE-GTGVPLIADGGIRFSGDLAKAMVAG-AYCVMMGSMF 364 (490)
T ss_dssp TTCS--EEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHT-TTTCCEEEESCCCSHHHHHHHHHHT-CSEEEECTTT
T ss_pred cCCC--EEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhc-cCCCcEEEeCCCCCHHHHHHHHHcC-CCeeeecHHH
Confidence 4432 2210 1 11224556666665332 4589999999999999999999986 5777775443
No 196
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=75.65 E-value=28 Score=33.20 Aligned_cols=158 Identities=9% Similarity=0.040 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH-HHHHHhC--CCcE----EEEeCC-C----CCCHHHHHHHHH-Hh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVL-QAIHAVH--PHCS----FILDAN-E----GYTSEEAVEVLG-KL 270 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l-~~ir~~~--~~~~----L~vDAN-~----~~s~~~A~~~l~-~L 270 (427)
+.++..+.++..++.|++.|-.=-.-......+.| +++++.+ .++. +.+..+ + .++++...+-++ .|
T Consensus 32 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL 111 (333)
T 1pz1_A 32 DEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSL 111 (333)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCEEEEEECEEESSSCEEECCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeEEEEEeeCccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 56777788888899999987654311111223333 4454432 2332 221111 2 346665544332 34
Q ss_pred hhCC---CCCceEeCCCCCC----ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHH
Q 014285 271 NDMG---VIPVLFEQPVHRD----DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGT 343 (427)
Q Consensus 271 ~~~~---l~~~~iEqP~~~~----d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~ 343 (427)
+.++ +.++++-.|-+.. -|+.|.+|.+ .+.==+.|=|.++...++++++...++++|+.-+..--..-
T Consensus 112 ~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e 186 (333)
T 1pz1_A 112 KRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYD-----AGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREME 186 (333)
T ss_dssp HHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHH-----TTSBSCEEECSCCHHHHHHHHTTSCCCEECCBCBTTBCGGG
T ss_pred HHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHH-----CCcCCEEEecCCCHHHHHHHHhcCCcEEEeccccCccCchH
Confidence 4433 2234555554322 3445555543 23222445577889999999988889999988776531111
Q ss_pred HHHHHHHHHcCCcEEEcccCchh
Q 014285 344 LQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
.+++..|+++||.++..+.+.+|
T Consensus 187 ~~l~~~~~~~gi~v~a~spL~~G 209 (333)
T 1pz1_A 187 ESVLPYAKDNKITTLLYGSLCRG 209 (333)
T ss_dssp GTHHHHHHHTTCEEEEBCTTGGG
T ss_pred HHHHHHHHHcCceEEEeecccCC
Confidence 46888999999999998877554
No 197
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=75.48 E-value=43 Score=29.61 Aligned_cols=144 Identities=14% Similarity=0.154 Sum_probs=90.6
Q ss_pred eeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCC
Q 014285 195 STAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMG 274 (427)
Q Consensus 195 p~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~ 274 (427)
++...+...++++..+.++++.+.|.+.+.+..-. ....+.++.+++ +++.+..+. -.+.+++...++. +
T Consensus 14 ~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~--~~~~~~i~~~~~--~~~~~gag~--vl~~d~~~~A~~~----G 83 (207)
T 2yw3_A 14 RLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRT--EKGLEALKALRK--SGLLLGAGT--VRSPKEAEAALEA----G 83 (207)
T ss_dssp CEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSS--THHHHHHHHHTT--SSCEEEEES--CCSHHHHHHHHHH----T
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCC--hHHHHHHHHHhC--CCCEEEeCe--EeeHHHHHHHHHc----C
Confidence 34444455567777788888899999999887632 244567777777 666665554 5566554433332 3
Q ss_pred CCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC-c-cHHHHHHHHHHHHH
Q 014285 275 VIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK-F-GVLGTLQIIKATRK 352 (427)
Q Consensus 275 l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~-~-Gi~~~~~~~~~A~~ 352 (427)
.. ++=-| ..| ....+.++ ..++|+..+ +.+..++.++.+.+ +||+.+-|.. . |+.... ++...
T Consensus 84 Ad--~v~~~--~~d-~~v~~~~~----~~g~~~i~G--~~t~~e~~~A~~~G-ad~v~~fpa~~~gG~~~lk---~l~~~ 148 (207)
T 2yw3_A 84 AA--FLVSP--GLL-EEVAALAQ----ARGVPYLPG--VLTPTEVERALALG-LSALKFFPAEPFQGVRVLR---AYAEV 148 (207)
T ss_dssp CS--EEEES--SCC-HHHHHHHH----HHTCCEEEE--ECSHHHHHHHHHTT-CCEEEETTTTTTTHHHHHH---HHHHH
T ss_pred CC--EEEcC--CCC-HHHHHHHH----HhCCCEEec--CCCHHHHHHHHHCC-CCEEEEecCccccCHHHHH---HHHhh
Confidence 22 55444 334 33444443 467888776 77899998888764 8999887643 3 343322 34445
Q ss_pred c-CCcEEEcccC
Q 014285 353 S-GLHLMIDGMI 363 (427)
Q Consensus 353 ~-gi~~~~~s~~ 363 (427)
. +++++..+-+
T Consensus 149 ~~~ipvvaiGGI 160 (207)
T 2yw3_A 149 FPEVRFLPTGGI 160 (207)
T ss_dssp CTTCEEEEBSSC
T ss_pred CCCCcEEEeCCC
Confidence 5 8999877644
No 198
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=75.47 E-value=5.5 Score=36.15 Aligned_cols=131 Identities=20% Similarity=0.270 Sum_probs=77.8
Q ss_pred ceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCC------CCCCH---HHH
Q 014285 193 SLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDAN------EGYTS---EEA 263 (427)
Q Consensus 193 ~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN------~~~s~---~~A 263 (427)
.+|+-...++.+++++. ++.+.|.. ++-+|...-.+-+.++.+++.++.+.+.+|++ .+|.. ...
T Consensus 73 ~ipvi~~Ggi~~~~~~~----~~~~~Gad--~V~lg~~~l~~p~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~ 146 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAE----KLRKLGYR--RQIVSSKVLEDPSFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEIDP 146 (241)
T ss_dssp GGGEEEESSCCSHHHHH----HHHHTTCC--EEEECHHHHHCTTHHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCCCH
T ss_pred CCcEEEECCCCCHHHHH----HHHHCCCC--EEEECchHhhChHHHHHHHHcCCcEEEEEEecCCEEEECCceecCCCCH
Confidence 35655555667776543 34456754 44566433334455766732455567889984 23421 022
Q ss_pred HHHHHHhhhCCCCCceEeCCC------CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc-----CCCcEEE
Q 014285 264 VEVLGKLNDMGVIPVLFEQPV------HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE-----NLASVVN 332 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~------~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~-----~a~~~i~ 332 (427)
.++++.+.+.+....++ -.+ ..-|++.++++++ .+++||...=-+.+.++++++++. +.++.+.
T Consensus 147 ~e~~~~~~~~G~~~i~~-t~~~~~g~~~g~~~~~i~~l~~----~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~ 221 (241)
T 1qo2_A 147 VSLLKRLKEYGLEEIVH-TEIEKDGTLQEHDFSLTKKIAI----EAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVI 221 (241)
T ss_dssp HHHHHHHHTTTCCEEEE-EETTHHHHTCCCCHHHHHHHHH----HHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHhCCCCEEEE-EeecccccCCcCCHHHHHHHHH----hcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEE
Confidence 34555565665542233 221 1236888888875 578999887788889999999876 3166665
Q ss_pred eC
Q 014285 333 IK 334 (427)
Q Consensus 333 lk 334 (427)
+=
T Consensus 222 vg 223 (241)
T 1qo2_A 222 VG 223 (241)
T ss_dssp EC
T ss_pred ee
Confidence 53
No 199
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=75.30 E-value=23 Score=33.08 Aligned_cols=76 Identities=11% Similarity=0.049 Sum_probs=60.9
Q ss_pred eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEc
Q 014285 281 EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMID 360 (427)
Q Consensus 281 EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~ 360 (427)
|++.-.+..+.++++++ .+++||-..+-+.+..++.++...+ +|.|.+..+...-....++.+.|+..|+.+++.
T Consensus 101 d~~~f~Gs~~~L~~ir~----~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lve 175 (272)
T 3tsm_A 101 DTPSFQGAPEFLTAARQ----ACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMASVDDDLAKELEDTAFALGMDALIE 175 (272)
T ss_dssp CSTTTCCCHHHHHHHHH----TSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccccCCCHHHHHHHHH----hcCCCEEECCccCCHHHHHHHHHcC-CCEEEEcccccCHHHHHHHHHHHHHcCCeEEEE
Confidence 66666678888888865 6899998888888888888887765 789888887776566788899999999997754
Q ss_pred c
Q 014285 361 G 361 (427)
Q Consensus 361 s 361 (427)
.
T Consensus 176 v 176 (272)
T 3tsm_A 176 V 176 (272)
T ss_dssp E
T ss_pred e
Confidence 4
No 200
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=74.54 E-value=43 Score=29.18 Aligned_cols=152 Identities=15% Similarity=0.086 Sum_probs=82.2
Q ss_pred ecCCCHHHHHHHHHHHhhcCCcEEEEeccCC-chhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCc
Q 014285 200 IPAVSPAEASELASKYCKLGFSTLKLNVGRN-ITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278 (427)
Q Consensus 200 i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~-~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~ 278 (427)
....+.++..+.++++ ..|...+|+-. +. ...-.+.++++|+.+++..+.+|.--....+. +++.+.+.|..
T Consensus 7 ~D~~~~~~~~~~~~~~-~~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~---~~~~~~~~Gad-- 79 (211)
T 3f4w_A 7 LDELTLPEAMVFMDKV-VDDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHF---ESQLLFDAGAD-- 79 (211)
T ss_dssp ECSCCHHHHHHHHHHH-GGGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHTTCS--
T ss_pred eCCCCHHHHHHHHHHh-hcCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHH---HHHHHHhcCCC--
Confidence 3445677777777777 35666655543 11 24456789999998777777555433333432 35556666643
Q ss_pred eEeCCCCC--CChhhHHHHHHhhccccCCeEEec-CCCCCH-HHHHHHHHcCCCcEEEeCCCCccHH----HHHHHHHHH
Q 014285 279 LFEQPVHR--DDWSGLHDVSNFARDTYGISVVAD-ESCRSL-NDVQKVMQENLASVVNIKLAKFGVL----GTLQIIKAT 350 (427)
Q Consensus 279 ~iEqP~~~--~d~~~~~~L~~~~r~~~~iPIa~d-E~~~~~-~~~~~ll~~~a~~~i~lk~~~~Gi~----~~~~~~~~A 350 (427)
++==|... ++.+.+.+.++ +.++++..+ -...+. ..++.+.+. .+|++.+.+...|-+ ....+.++.
T Consensus 80 ~v~v~~~~~~~~~~~~~~~~~----~~g~~~~v~~~~~~t~~~~~~~~~~~-g~d~i~v~~g~~g~~~~~~~~~~i~~l~ 154 (211)
T 3f4w_A 80 YVTVLGVTDVLTIQSCIRAAK----EAGKQVVVDMICVDDLPARVRLLEEA-GADMLAVHTGTDQQAAGRKPIDDLITML 154 (211)
T ss_dssp EEEEETTSCHHHHHHHHHHHH----HHTCEEEEECTTCSSHHHHHHHHHHH-TCCEEEEECCHHHHHTTCCSHHHHHHHH
T ss_pred EEEEeCCCChhHHHHHHHHHH----HcCCeEEEEecCCCCHHHHHHHHHHc-CCCEEEEcCCCcccccCCCCHHHHHHHH
Confidence 22223322 12233333333 357777654 223344 335666655 488888776544411 122333444
Q ss_pred HHc-CCcEEEcccC
Q 014285 351 RKS-GLHLMIDGMI 363 (427)
Q Consensus 351 ~~~-gi~~~~~s~~ 363 (427)
+.. ++++.+++-+
T Consensus 155 ~~~~~~~i~~~gGI 168 (211)
T 3f4w_A 155 KVRRKARIAVAGGI 168 (211)
T ss_dssp HHCSSCEEEEESSC
T ss_pred HHcCCCcEEEECCC
Confidence 443 7888876544
No 201
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=74.45 E-value=29 Score=33.80 Aligned_cols=127 Identities=13% Similarity=0.150 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC-C---------chhhHHHHHHHHHh---C---CCcEEEEeCCCCCCHHHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR-N---------ITADFDVLQAIHAV---H---PHCSFILDANEGYTSEEAVEVL 267 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~-~---------~~~d~~~l~~ir~~---~---~~~~L~vDAN~~~s~~~A~~~l 267 (427)
+++++.+.++.+ ..+...|-+.+|. + .+.-.+.++++++. . .++.+.|=-.-.++.++..+++
T Consensus 162 ~~~dy~~~~~~~-~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia 240 (367)
T 3zwt_A 162 AAEDYAEGVRVL-GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp HHHHHHHHHHHH-GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHH-hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHH
Confidence 567777666665 4456888888873 1 12223456666542 1 2445555555557888888888
Q ss_pred HHhhhCCCCCce-----EeCC-----CCC-------------CChhhHHHHHHhhcccc--CCeEEecCCCCCHHHHHHH
Q 014285 268 GKLNDMGVIPVL-----FEQP-----VHR-------------DDWSGLHDVSNFARDTY--GISVVADESCRSLNDVQKV 322 (427)
Q Consensus 268 ~~L~~~~l~~~~-----iEqP-----~~~-------------~d~~~~~~L~~~~r~~~--~iPIa~dE~~~~~~~~~~l 322 (427)
+.+++.++.-.. +..+ ... -.++..+++++ .. .+||...=.+.+..|+.++
T Consensus 241 ~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~----~v~~~ipvI~~GGI~s~~da~~~ 316 (367)
T 3zwt_A 241 SVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYA----LTQGRVPIIGVGGVSSGQDALEK 316 (367)
T ss_dssp HHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHH----HTTTCSCEEEESSCCSHHHHHHH
T ss_pred HHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHH----HcCCCceEEEECCCCCHHHHHHH
Confidence 888876653101 1221 100 01233445544 45 7999998899999999999
Q ss_pred HHcCCCcEEEeCCC
Q 014285 323 MQENLASVVNIKLA 336 (427)
Q Consensus 323 l~~~a~~~i~lk~~ 336 (427)
++.+ +|.|++=-.
T Consensus 317 l~~G-Ad~V~vgra 329 (367)
T 3zwt_A 317 IRAG-ASLVQLYTA 329 (367)
T ss_dssp HHHT-CSEEEESHH
T ss_pred HHcC-CCEEEECHH
Confidence 9876 688887543
No 202
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=73.38 E-value=23 Score=34.13 Aligned_cols=142 Identities=8% Similarity=0.031 Sum_probs=85.9
Q ss_pred HHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChh
Q 014285 212 ASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWS 290 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~ 290 (427)
+++..+.|.+.+-+-... +.+.-.+.++.+++.+-++...+---...+++...+.++.+.+++.+...+=+-.-.-...
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~ 178 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMN 178 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHH
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHH
Confidence 444556788887776543 3455556677778777555554422356788999999999999887655666655544556
Q ss_pred hHHHHHHhhcccc--CCeEEecC---CCCCHHHHHHHHHcCCCcEEEeCCCCccH------HHHHHHHHHHHHcCCc
Q 014285 291 GLHDVSNFARDTY--GISVVADE---SCRSLNDVQKVMQENLASVVNIKLAKFGV------LGTLQIIKATRKSGLH 356 (427)
Q Consensus 291 ~~~~L~~~~r~~~--~iPIa~dE---~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi------~~~~~~~~~A~~~gi~ 356 (427)
..+++.+.+++.+ ++||...= .-.........++.+ ++. +|.+..|+ ..+..++...+..|+.
T Consensus 179 ~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aG-a~~--vd~tv~GlG~~aGN~~le~lv~~L~~~g~~ 252 (345)
T 1nvm_A 179 DIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEG-CDR--VDASLAGMGAGAGNAPLEVFIAVAERLGWN 252 (345)
T ss_dssp HHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTT-CCE--EEEBGGGCSSTTCBCBHHHHHHHHHHHTCB
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcC-CCE--EEecchhccCCccCcCHHHHHHHHHhcCCC
Confidence 6666665555567 68998731 112233345566654 454 45555442 2245556666666554
No 203
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=73.33 E-value=14 Score=34.81 Aligned_cols=158 Identities=9% Similarity=0.088 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH-HHHHHh-CCCcEEE----EeC-C----CCCCHHHHHHHHH-Hhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVL-QAIHAV-HPHCSFI----LDA-N----EGYTSEEAVEVLG-KLN 271 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l-~~ir~~-~~~~~L~----vDA-N----~~~s~~~A~~~l~-~L~ 271 (427)
+.++..+.++..++.|++.|-.=-.-......+.| +++++. -.++.|. +.. + ..++++...+-++ .|+
T Consensus 33 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~ 112 (312)
T 1pyf_A 33 NEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLK 112 (312)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 46677788888899999987653221111223333 344331 1222221 111 1 2456665443332 233
Q ss_pred hCC---CCCceEeCCCCCC----ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHH
Q 014285 272 DMG---VIPVLFEQPVHRD----DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTL 344 (427)
Q Consensus 272 ~~~---l~~~~iEqP~~~~----d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~ 344 (427)
.++ +.++++-.|-+.. -|+.|.+|.+ .+.==+.|=|.++...++++++...++++|+.-+..--..-.
T Consensus 113 rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~ 187 (312)
T 1pyf_A 113 RLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKK-----AGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEK 187 (312)
T ss_dssp HHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHH-----TTSBSCEEEESCCHHHHHHHTTTSCCCEEEEECBTTBCGGGT
T ss_pred HhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHH-----CCCcCEEEecCCCHHHHHHHHhhCCceEEeccCCccccchHH
Confidence 322 2234555554322 3445555543 222123344677889999999887889999887765311113
Q ss_pred HHHHHHHHcCCcEEEcccCchh
Q 014285 345 QIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~s~~es~ 366 (427)
+++..|+++||.++..+.+.+|
T Consensus 188 ~l~~~~~~~gi~v~a~spL~~G 209 (312)
T 1pyf_A 188 TFFPYTKEHNISFIPYFPLVSG 209 (312)
T ss_dssp THHHHHHHHTCEEEEESTTTTT
T ss_pred HHHHHHHHcCCeEEEecccccc
Confidence 5888999999999998877554
No 204
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=72.94 E-value=1.8 Score=39.67 Aligned_cols=129 Identities=12% Similarity=0.089 Sum_probs=27.5
Q ss_pred ceeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHh-CCC-cEEEEeCCC----------CCCH
Q 014285 193 SLSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAV-HPH-CSFILDANE----------GYTS 260 (427)
Q Consensus 193 ~ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~-~~~-~~L~vDAN~----------~~s~ 260 (427)
.+|+-...++.+++++. ++++.| +=++-+|...-.|.+.++.+++. +++ +.+.+|+.. +|..
T Consensus 79 ~ipvi~~Ggi~~~~~~~----~~l~~G--ad~V~ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~~~~v~~~g~~~ 152 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFL----EAFLRG--ADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKK 152 (247)
T ss_dssp CSCEEEESCCCSHHHHH----HHHHTT--CSEECCSHHHHHCTHHHHHHHHHHC--------------------------
T ss_pred CCCEEEeCCCCCHHHHH----HHHHcC--CCeeehhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCCCEEEEECCCcc
Confidence 35665666777876643 345667 44556665333455567777764 544 556788752 3432
Q ss_pred ---HHHHHHHHHhhhCCCCCceEeCCCC------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEE
Q 014285 261 ---EEAVEVLGKLNDMGVIPVLFEQPVH------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVV 331 (427)
Q Consensus 261 ---~~A~~~l~~L~~~~l~~~~iEqP~~------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i 331 (427)
.++.++++.+++.+.....+ -.+. .-+++.++++++ .+++||.+.=-+.+.+++.++++.+ ++.+
T Consensus 153 ~~~~~~~~~a~~~~~~G~~~i~~-t~~~~~g~~~g~~~~~~~~i~~----~~~iPvia~GGI~~~~d~~~~~~~G-ad~v 226 (247)
T 3tdn_A 153 NTGILLRDWVVEVEKRGAGEILL-TSIDRDGTKSGYDTEMIRFVRP----LTTLPIIASGGAGKMEHFLEAFLRG-ADKV 226 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCHHHHHHHHHhcCCCEEEE-ecccCCCCcCCCCHHHHHHHHH----hCCCCEEEECCCCCHHHHHHHHHcC-CcHh
Confidence 34566777777665431111 1111 124455566654 5678887666667788888888775 6665
Q ss_pred Ee
Q 014285 332 NI 333 (427)
Q Consensus 332 ~l 333 (427)
.+
T Consensus 227 ~v 228 (247)
T 3tdn_A 227 SI 228 (247)
T ss_dssp --
T ss_pred hc
Confidence 44
No 205
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=72.91 E-value=13 Score=36.90 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=67.8
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cchh----hHHHHHHHHH-hCCC-cEEEEeCCCC----
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NITA----DFDVLQAIHA-VHPH-CSFILDANEG---- 257 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~~~----d~~~l~~ir~-~~~~-~~L~vDAN~~---- 257 (427)
.+.++..++.||..|-+..+. +++. -++.+++||+ ++++ +.+|+-....
T Consensus 171 ~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~ 250 (407)
T 3tjl_A 171 TNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNM 250 (407)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGC
T ss_pred HHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCC
Confidence 344555678999999999863 1111 2556788888 4543 6667765332
Q ss_pred ---CC----HHHHHHHHHHh---hhCC--CCCceEe--CCCCCC--------ChhhHHHHHHhhccccCCeEEecCCCCC
Q 014285 258 ---YT----SEEAVEVLGKL---NDMG--VIPVLFE--QPVHRD--------DWSGLHDVSNFARDTYGISVVADESCRS 315 (427)
Q Consensus 258 ---~s----~~~A~~~l~~L---~~~~--l~~~~iE--qP~~~~--------d~~~~~~L~~~~r~~~~iPIa~dE~~~~ 315 (427)
|+ .++...+++.| ++.+ +. ||. +|-... ++...+.+++ ...+||...=.+.+
T Consensus 251 ~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~--ylhv~~~~~~~~~~~~~~~~~~~~~~ir~----~~~~PvI~~Ggi~~ 324 (407)
T 3tjl_A 251 KAHKDTVHPLTTFSYLVHELQQRADKGQGIA--YISVVEPRVSGNVDVSEEDQAGDNEFVSK----IWKGVILKAGNYSY 324 (407)
T ss_dssp CGGGSSSCHHHHHHHHHHHHHHHHHTTCCCS--EEEEECTTEETTEECCGGGCCCCSHHHHH----HCCSEEEEESCGGG
T ss_pred cccccccccHHHHHHHHHHHHhHhhcCCcee--EEEEEccccCCCCcCCccchhHHHHHHHH----HhCCCEEecCCCCC
Confidence 13 56778889999 7777 43 442 231100 1122333433 34567766545555
Q ss_pred HHHHHHHHHc---CCCcEEEe
Q 014285 316 LNDVQKVMQE---NLASVVNI 333 (427)
Q Consensus 316 ~~~~~~ll~~---~a~~~i~l 333 (427)
..+..+.++. +.+|.|.+
T Consensus 325 ~~dA~~~i~~~~~g~aDlVa~ 345 (407)
T 3tjl_A 325 DAPEFKTLKEDIADKRTLVGF 345 (407)
T ss_dssp GTTTTHHHHHHHTTSSEEEEC
T ss_pred HHHHHHHHHhhccCCCeEEEe
Confidence 5444445544 66776654
No 206
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=72.27 E-value=54 Score=33.25 Aligned_cols=121 Identities=24% Similarity=0.315 Sum_probs=81.5
Q ss_pred HHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeC---C-
Q 014285 209 SELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ---P- 283 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEq---P- 283 (427)
.+.++.+.+.|...+-+.... +.+.-.+.++.+|+.+|++.+.+ ...-+.++|....+. +.. .|== |
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~--g~v~t~e~a~~l~~a----GaD--~I~Vg~g~G 304 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEA----GVS--AVKVGIGPG 304 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEE--EEECSHHHHHHHHHH----TCS--EEEECSSCC
T ss_pred HHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEE--cccCcHHHHHHHHHh----CCC--EEEECCCCC
Confidence 456777888999999888764 34556788999999888877766 223466766555443 332 2221 1
Q ss_pred ----------CCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc
Q 014285 284 ----------VHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG 339 (427)
Q Consensus 284 ----------~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G 339 (427)
+...++..+.++++.++ ..++||..|=-+.+..|+.+++..+ ++.+++--...|
T Consensus 305 s~~~tr~~~g~g~p~~~~i~~v~~~~~-~~~iPVIa~GGI~~~~di~kala~G-Ad~V~iGs~f~~ 368 (496)
T 4fxs_A 305 SICTTRIVTGVGVPQITAIADAAGVAN-EYGIPVIADGGIRFSGDISKAIAAG-ASCVMVGSMFAG 368 (496)
T ss_dssp TTBCHHHHHCCCCCHHHHHHHHHHHHG-GGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTT
T ss_pred cCcccccccCCCccHHHHHHHHHHHhc-cCCCeEEEeCCCCCHHHHHHHHHcC-CCeEEecHHHhc
Confidence 11224555666655332 4589999999999999999999886 688887655544
No 207
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=72.25 E-value=83 Score=31.43 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=52.8
Q ss_pred EEEeCCCCCCHHHHHHHHHHhhhCCCCCceE-------eCC----CCCC------------ChhhHHHHHHhhcccc--C
Q 014285 250 FILDANEGYTSEEAVEVLGKLNDMGVIPVLF-------EQP----VHRD------------DWSGLHDVSNFARDTY--G 304 (427)
Q Consensus 250 L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i-------EqP----~~~~------------d~~~~~~L~~~~r~~~--~ 304 (427)
+.|=-...|+.++..++++.+++.++. .| .++ +..+ .++..+++++ .+ .
T Consensus 300 V~vKispd~~~ed~~~iA~~~~~aGaD--gI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~----~v~~~ 373 (443)
T 1tv5_A 300 VFVKLAPDLNQEQKKEIADVLLETNID--GMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYN----YTNKQ 373 (443)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHTTCS--EEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHH----HTTTC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCC--EEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHH----HcCCC
Confidence 444444458888888899998887754 22 211 0000 1233344443 45 7
Q ss_pred CeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 305 ISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 305 iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
+||...=-+.+..|+.+.+..+ +|.|++=-.
T Consensus 374 iPVIg~GGI~s~~DA~e~l~aG-Ad~Vqigra 404 (443)
T 1tv5_A 374 IPIIASGGIFSGLDALEKIEAG-ASVCQLYSC 404 (443)
T ss_dssp SCEEEESSCCSHHHHHHHHHTT-EEEEEESHH
T ss_pred CcEEEECCCCCHHHHHHHHHcC-CCEEEEcHH
Confidence 9999998999999999999987 899887543
No 208
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=71.29 E-value=34 Score=32.70 Aligned_cols=92 Identities=14% Similarity=0.200 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec-----c--CCchhhHHHH----HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV-----G--RNITADFDVL----QAIHAVHPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi-----G--~~~~~d~~~l----~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
+.+.+.+.+++++++|-..|-+-. | .+.+++++++ ++|++..+++.|.||. |.++.|.+-++.=.+
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT---~~~~VaeaAl~aGa~ 139 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT---WRAQVAKAACAAGAD 139 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC---SCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC---CCHHHHHHHHHhCCC
Confidence 567888899999999999887763 3 2456777764 6667767799999996 455555555554221
Q ss_pred CCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 273 MGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 273 ~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
+ +...|-+ +.++|..+++ +.+.|+.+
T Consensus 140 i-INDVsg~------~d~~m~~vaa----~~g~~vVl 165 (318)
T 2vp8_A 140 L-INDTWGG------VDPAMPEVAA----EFGAGLVC 165 (318)
T ss_dssp E-EEETTSS------SSTTHHHHHH----HHTCEEEE
T ss_pred E-EEECCCC------CchHHHHHHH----HhCCCEEE
Confidence 1 0001222 2346777765 56777765
No 209
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=71.19 E-value=36 Score=31.83 Aligned_cols=144 Identities=8% Similarity=0.117 Sum_probs=79.1
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEec-----cC---CchhhHHHH----HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHh
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNV-----GR---NITADFDVL----QAIHAVHPHCSFILDANEGYTSEEAVEVLGKL 270 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKi-----G~---~~~~d~~~l----~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L 270 (427)
.+++.+.+.+++++++|-..|.+-. |. +.+++++++ +++++. ++.|.||. |+++.|..-++.
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT---~~~~va~aAl~a- 99 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT---MRADVARAALQN- 99 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC---SCHHHHHHHHHT-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC---CCHHHHHHHHHc-
Confidence 4788899999999999999998875 31 345666664 444443 78999996 555655555554
Q ss_pred hhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCC------CC-------C-----HHHH----HHHHHcCC-
Q 014285 271 NDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES------CR-------S-----LNDV----QKVMQENL- 327 (427)
Q Consensus 271 ~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~------~~-------~-----~~~~----~~ll~~~a- 327 (427)
|.+ +|-.=--....+.|.++++ +.+.|+.+==. .. + ...+ +.+.+.+-
T Consensus 100 ---Ga~--iINdvsg~~~d~~m~~~~a----~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~ 170 (280)
T 1eye_A 100 ---GAQ--MVNDVSGGRADPAMGPLLA----EADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVD 170 (280)
T ss_dssp ---TCC--EEEETTTTSSCTTHHHHHH----HHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ---CCC--EEEECCCCCCCHHHHHHHH----HhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCC
Confidence 322 3443321111346677765 56777765211 00 1 1122 33344432
Q ss_pred CcEEEeCCCC-cc--HHHHH---HHHHHHHHcCCcEEEcc
Q 014285 328 ASVVNIKLAK-FG--VLGTL---QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 328 ~~~i~lk~~~-~G--i~~~~---~~~~~A~~~gi~~~~~s 361 (427)
.+=|++||.. .| ....+ +-++.-++.|.++.++-
T Consensus 171 ~~~IilDPg~Gf~k~~~~n~~ll~~l~~~~~~g~Pvl~G~ 210 (280)
T 1eye_A 171 PARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGA 210 (280)
T ss_dssp GGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECC
T ss_pred hhhEEEECCCCcccCHHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 2258899974 23 33322 33344455789988764
No 210
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=70.24 E-value=53 Score=32.15 Aligned_cols=117 Identities=21% Similarity=0.233 Sum_probs=75.0
Q ss_pred HHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE-------
Q 014285 209 SELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF------- 280 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i------- 280 (427)
.+.++.+.+.|+..+-+..+. +.+.-.+.++.+|+..|++.+.+ -+..++++|.. +.+.+.....+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv--~~v~~~~~a~~----a~~~Gad~I~vg~~~G~~ 228 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIA--GNIVTKEAALD----LISVGADCLKVGIGPGSI 228 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEE--EEECSHHHHHH----HHTTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEE--cCCCcHHHHHH----HHhcCCCEEEECCCCCcC
Confidence 445666778999998885443 34556778899999877778877 12345665544 33445431122
Q ss_pred ----e-CCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 281 ----E-QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 281 ----E-qP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
+ ...-..+++.+.++.+.+ ...++||..+=-+.+..|+.+++..+ ++.+++
T Consensus 229 ~~~~~~~~~g~p~~~~l~~v~~~~-~~~~ipVia~GGI~~~~d~~~ala~G-Ad~V~i 284 (404)
T 1eep_A 229 CTTRIVAGVGVPQITAICDVYEAC-NNTNICIIADGGIRFSGDVVKAIAAG-ADSVMI 284 (404)
T ss_dssp SHHHHHHCCCCCHHHHHHHHHHHH-TTSSCEEEEESCCCSHHHHHHHHHHT-CSEEEE
T ss_pred cCccccCCCCcchHHHHHHHHHHH-hhcCceEEEECCCCCHHHHHHHHHcC-CCHHhh
Confidence 0 111111455566655422 24689999988999999999999987 778776
No 211
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=70.12 E-value=74 Score=30.01 Aligned_cols=152 Identities=11% Similarity=0.120 Sum_probs=97.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIP 277 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~ 277 (427)
|.+.+.+.++.+++.|-..+=+-- |- +.++=.+.++.+.+....+.+.+ .-++-+..++++..+..++.|..-
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gada 105 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV-GVSAPGFAAMRRLARLSMDAGAAG 105 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE-ECCCSSHHHHHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE-ecCCCCHHHHHHHHHHHHHcCCCE
Confidence 567788889999999998874432 21 33444556777777336788887 446678999999999998876542
Q ss_pred ceEeCCCCCCChh----hHHHHHHhhccccC--CeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 278 VLFEQPVHRDDWS----GLHDVSNFARDTYG--ISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 278 ~~iEqP~~~~d~~----~~~~L~~~~r~~~~--iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
..+=-|...-+-+ -++++++ .++ +||.+=. .-.+.+.+.++.+. .++++-+|-+-.| +....
T Consensus 106 vlv~~P~~~~s~~~l~~~f~~va~----a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pnIvgiKd~~~~~~~~~~ 180 (313)
T 3dz1_A 106 VMIAPPPSLRTDEQITTYFRQATE----AIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMD-SASCVMLKHEDWPGLEKIT 180 (313)
T ss_dssp EEECCCTTCCSHHHHHHHHHHHHH----HHCTTSCEEEEECHHHHCCCCCHHHHHHHHHH-CSSEEEEEECCSSCHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHH----hCCCCCcEEEEeCccccCcCCCHHHHHHHHHh-CCCEEEEEcCCCCCHHHHH
Confidence 2332333211222 3445554 577 9998743 23456666777643 3788999975456 77777
Q ss_pred HHHHHHHH---cCCcEEEcc
Q 014285 345 QIIKATRK---SGLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~---~gi~~~~~s 361 (427)
++++.... -++.+..+.
T Consensus 181 ~~~~~~~~~~~~~f~v~~G~ 200 (313)
T 3dz1_A 181 TLRGFQKDGSLRPLSILCGN 200 (313)
T ss_dssp HHHHHHHHTSSCCCEEEECG
T ss_pred HHHHhcCccCCCCeEEEeCC
Confidence 77766543 466666654
No 212
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=69.62 E-value=75 Score=29.88 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=98.1
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|.+.+=+-- |- +.++=.+.++.+.+. ...+.+.+= -++-+.+++++..+..++.+..
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaG-vg~~~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAG-SGCESTQATVEMTVSMAQVGAD 111 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEE-CCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEe-cCCCCHHHHHHHHHHHHHcCCC
Confidence 567778889999999988875543 21 334445567777774 567777773 4667899999999999988765
Q ss_pred CceEeCCCCC----CC---hhhHHHHHHhhccccCCeEEecCC------CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHH
Q 014285 277 PVLFEQPVHR----DD---WSGLHDVSNFARDTYGISVVADES------CRSLNDVQKVMQENLASVVNIKLAKFG-VLG 342 (427)
Q Consensus 277 ~~~iEqP~~~----~d---~~~~~~L~~~~r~~~~iPIa~dE~------~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~ 342 (427)
-..+=-|.-. .+ ++-++++++ .+++||.+=.. -.+.+.+.++.+ .++++-+|-+- | +..
T Consensus 112 avlv~~P~y~~~~~s~~~l~~~f~~ia~----a~~lPiilYn~P~~tg~~l~~~~~~~La~--~pnIvgiKdss-gd~~~ 184 (307)
T 3s5o_A 112 AAMVVTPCYYRGRMSSAALIHHYTKVAD----LSPIPVVLYSVPANTGLDLPVDAVVTLSQ--HPNIVGMXDSG-GDVTR 184 (307)
T ss_dssp EEEEECCCTTGGGCCHHHHHHHHHHHHH----HCSSCEEEEECHHHHSCCCCHHHHHHHHT--STTEEEEEECS-CCHHH
T ss_pred EEEEcCCCcCCCCCCHHHHHHHHHHHHh----hcCCCEEEEeCCcccCCCCCHHHHHHHhc--CCCEEEEEcCC-CCHHH
Confidence 3344455431 22 223445554 57899987542 345666777764 47899999874 6 877
Q ss_pred HHHHHHHHHHcCCcEEEcc
Q 014285 343 TLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~~~s 361 (427)
..++++.....++.+..+.
T Consensus 185 ~~~~~~~~~~~~f~v~~G~ 203 (307)
T 3s5o_A 185 IGLIVHKTRKQDFQVLAGS 203 (307)
T ss_dssp HHHHHHHTTTSSCEEEESS
T ss_pred HHHHHHhccCCCeEEEeCc
Confidence 6666654433456665543
No 213
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=69.53 E-value=23 Score=36.72 Aligned_cols=146 Identities=12% Similarity=0.130 Sum_probs=90.6
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC---CchhhHHHH-HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC-CCc
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR---NITADFDVL-QAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGV-IPV 278 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~---~~~~d~~~l-~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l-~~~ 278 (427)
+.++..+.+++++++|-..|-+-.|. +.+++++++ ..|++. .++.|.||.. +++-+..-++.....++ .+.
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~~-~~vpisIDT~---~~~v~eaal~~~~G~~iINdi 413 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYV-SNVPLSLDIQ---NVDLTERALRAYPGRSLFNSA 413 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHH-TCSCEEEECC---CHHHHHHHHHHCSSCCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHhh-CCceEEEeCC---CHHHHHHHHHhcCCCCEEEEC
Confidence 56777888999999999999998874 445566554 555554 3788999965 66666666666533322 112
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCCeEEe---cC-CCCCHH----HH----HHHHHcCCCcEEEeCCCC----ccH--
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGISVVA---DE-SCRSLN----DV----QKVMQENLASVVNIKLAK----FGV-- 340 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~---dE-~~~~~~----~~----~~ll~~~a~~~i~lk~~~----~Gi-- 340 (427)
+-++ ++++.+..+++ +.+.|+.+ ++ .-.+.. .+ +.+.+.+-.+=|++||.. .|.
T Consensus 414 s~~~----~~~~~~~~~~~----~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk~~ 485 (566)
T 1q7z_A 414 KVDE----EELEMKINLLK----KYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEGKP 485 (566)
T ss_dssp ESCH----HHHHHHHHHHH----HHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTTCCH
T ss_pred Ccch----hhHHHHHHHHH----HhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCcHHH
Confidence 3333 33467777775 56777755 33 111222 22 233333311458999987 244
Q ss_pred HHHHHHHHHHHHcCCcEEEcc
Q 014285 341 LGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 341 ~~~~~~~~~A~~~gi~~~~~s 361 (427)
...++-++..++.|.++.++-
T Consensus 486 ~~~l~~~~~~~~~g~p~l~G~ 506 (566)
T 1q7z_A 486 VEVLKTIEFISSKGFNTTVGL 506 (566)
T ss_dssp HHHHHHHHHHHHTTCEECCBG
T ss_pred HHHHHHHHHHHhCCCCEEEEe
Confidence 455666677777899998764
No 214
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=69.42 E-value=7.5 Score=34.96 Aligned_cols=149 Identities=13% Similarity=0.178 Sum_probs=82.2
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH-hCC-CcEEEEeCCC----------CC---
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA-VHP-HCSFILDANE----------GY--- 258 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~-~~~-~~~L~vDAN~----------~~--- 258 (427)
+|+....++.+++++ +++.+.|...+-+-.. .-.|.+.+..+++ .+. .+.+.+|++. +|
T Consensus 78 ipvi~~g~i~~~~~~----~~~~~~Gad~V~i~~~--~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~ 151 (253)
T 1h5y_A 78 IPVLVGGGVRSLEDA----TTLFRAGADKVSVNTA--AVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREA 151 (253)
T ss_dssp SCEEEESSCCSHHHH----HHHHHHTCSEEEESHH--HHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEE
T ss_pred CCEEEECCCCCHHHH----HHHHHcCCCEEEEChH--HhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeec
Confidence 444444455666654 3445668766554322 2233445655555 453 3678888851 12
Q ss_pred ---CHHHHHHHHHHhhhCCCCCceEeCCCC------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCc
Q 014285 259 ---TSEEAVEVLGKLNDMGVIPVLFEQPVH------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLAS 329 (427)
Q Consensus 259 ---s~~~A~~~l~~L~~~~l~~~~iEqP~~------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~ 329 (427)
++.+ .++.+.+.+.....+- ++. .-+++.++++++ ..++||..+=-+.+..++.++++.+ ++
T Consensus 152 ~~~~~~e---~~~~~~~~G~d~i~~~-~~~~~g~~~~~~~~~i~~l~~----~~~~pvia~GGi~~~~~~~~~~~~G-a~ 222 (253)
T 1h5y_A 152 TGLDAVK---WAKEVEELGAGEILLT-SIDRDGTGLGYDVELIRRVAD----SVRIPVIASGGAGRVEHFYEAAAAG-AD 222 (253)
T ss_dssp EEEEHHH---HHHHHHHHTCSEEEEE-ETTTTTTCSCCCHHHHHHHHH----HCSSCEEEESCCCSHHHHHHHHHTT-CS
T ss_pred CCCCHHH---HHHHHHhCCCCEEEEe-cccCCCCcCcCCHHHHHHHHH----hcCCCEEEeCCCCCHHHHHHHHHcC-Cc
Confidence 3333 3444444433211232 111 115677788875 4689998887777789999998765 66
Q ss_pred EEEeCCCCc-cHHHHHHHHHHHHHcCCcE
Q 014285 330 VVNIKLAKF-GVLGTLQIIKATRKSGLHL 357 (427)
Q Consensus 330 ~i~lk~~~~-Gi~~~~~~~~~A~~~gi~~ 357 (427)
.+.+=-..+ +-....++.+..+++|+++
T Consensus 223 ~v~vgsal~~~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 223 AVLAASLFHFRVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp EEEESHHHHTTSSCHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHcCCCC
Confidence 666543322 1112345556667777764
No 215
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=69.19 E-value=54 Score=32.53 Aligned_cols=138 Identities=11% Similarity=0.078 Sum_probs=80.5
Q ss_pred eeeeeeecCCC-----HHHHHHHHHHHhhcCCcEEEEeccC----------CchhhHHHHHHHHHh--------------
Q 014285 194 LSTAITIPAVS-----PAEASELASKYCKLGFSTLKLNVGR----------NITADFDVLQAIHAV-------------- 244 (427)
Q Consensus 194 ip~~~~i~~~~-----~~~~~~~~~~~~~~Gf~~iKlKiG~----------~~~~d~~~l~~ir~~-------------- 244 (427)
.++..+++.+. .+++.+.++.+.+. ...|-+.++. +.+.=.+.+++|++.
T Consensus 182 ~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~ 260 (415)
T 3i65_A 182 HIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEF 260 (415)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHH
T ss_pred ceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 34555555443 56666666665333 6778887762 223334456666653
Q ss_pred -----CCCcE-EEEeCCCCCCHHHHHHHHHHhhhCCCCCceE-----eCC----------------CCCCChhhHHHHHH
Q 014285 245 -----HPHCS-FILDANEGYTSEEAVEVLGKLNDMGVIPVLF-----EQP----------------VHRDDWSGLHDVSN 297 (427)
Q Consensus 245 -----~~~~~-L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i-----EqP----------------~~~~d~~~~~~L~~ 297 (427)
..++. +.|=-.-.|+.++..++++.+++.++.-..+ ++. +.+-.++..+++++
T Consensus 261 ~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~ 340 (415)
T 3i65_A 261 LWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYN 340 (415)
T ss_dssp HCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHH
T ss_pred cccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHH
Confidence 11334 4444444577777778888887765431111 111 00001133445544
Q ss_pred hhcccc--CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 298 FARDTY--GISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 298 ~~r~~~--~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
.+ .+||...=-+.+..|+.+++..+ ++.|++=-..
T Consensus 341 ----~v~~~iPIIg~GGI~s~eDa~e~l~aG-Ad~VqIgra~ 377 (415)
T 3i65_A 341 ----YTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQLYSCL 377 (415)
T ss_dssp ----HTTTCSCEEECSSCCSHHHHHHHHHHT-EEEEEESHHH
T ss_pred ----HhCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEcHHH
Confidence 44 69999999999999999999986 6888875443
No 216
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=69.10 E-value=70 Score=29.30 Aligned_cols=156 Identities=9% Similarity=0.082 Sum_probs=79.7
Q ss_pred eeecCCCHHHHHHHHHHHhhcCCcEEEEeccC-Cc---------------------hhhHHHHHHHHHhCCCcEEEEeCC
Q 014285 198 ITIPAVSPAEASELASKYCKLGFSTLKLNVGR-NI---------------------TADFDVLQAIHAVHPHCSFILDAN 255 (427)
Q Consensus 198 ~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~---------------------~~d~~~l~~ir~~~~~~~L~vDAN 255 (427)
.+.+.-+.++..+.++.+.+.|...+.+-+-. |+ +.=++.++++|+..|++.+.+=
T Consensus 23 i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m-- 100 (262)
T 2ekc_A 23 LMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM-- 100 (262)
T ss_dssp EETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE--
T ss_pred ecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE--
Confidence 34444466777888888888999998885521 11 1223557788877656666551
Q ss_pred CCCCHHHH---HHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC---CeEEecCCCCCHHHHHHHHHcCCCc
Q 014285 256 EGYTSEEA---VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG---ISVVADESCRSLNDVQKVMQENLAS 329 (427)
Q Consensus 256 ~~~s~~~A---~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~---iPIa~dE~~~~~~~~~~ll~~~a~~ 329 (427)
+-|++-.+ .++++.+.+.|.. -.+.=.++.++...+.+.++ +.+ +++.... .+...++.+.+.. ..
T Consensus 101 ~y~n~v~~~g~~~f~~~~~~aG~d-gvii~dl~~ee~~~~~~~~~----~~gl~~i~l~~p~--t~~~rl~~ia~~a-~g 172 (262)
T 2ekc_A 101 TYYNPIFRIGLEKFCRLSREKGID-GFIVPDLPPEEAEELKAVMK----KYVLSFVPLGAPT--STRKRIKLICEAA-DE 172 (262)
T ss_dssp CCHHHHHHHCHHHHHHHHHHTTCC-EEECTTCCHHHHHHHHHHHH----HTTCEECCEECTT--CCHHHHHHHHHHC-SS
T ss_pred ecCcHHHHhhHHHHHHHHHHcCCC-EEEECCCCHHHHHHHHHHHH----HcCCcEEEEeCCC--CCHHHHHHHHHhC-CC
Confidence 33333222 3677777777764 24443333333333444333 234 4444332 3444555555433 23
Q ss_pred EEEe--CCCCcc-HH-----HHHHHHHHHHHc-CCcEEEcccC
Q 014285 330 VVNI--KLAKFG-VL-----GTLQIIKATRKS-GLHLMIDGMI 363 (427)
Q Consensus 330 ~i~l--k~~~~G-i~-----~~~~~~~~A~~~-gi~~~~~s~~ 363 (427)
++-. -....| -+ ...++++..+++ ++++.++.-+
T Consensus 173 fiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI 215 (262)
T 2ekc_A 173 MTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGV 215 (262)
T ss_dssp CEEEESSCC---------CHHHHHHHHHHHHHCCSCEEEESSC
T ss_pred CEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCC
Confidence 3211 111224 21 123555555554 7898887644
No 217
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=68.65 E-value=23 Score=36.07 Aligned_cols=115 Identities=18% Similarity=0.235 Sum_probs=75.4
Q ss_pred HHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEE-eCCCCCCHHHHHHHHHHhhhCCCCCceE----e
Q 014285 208 ASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFIL-DANEGYTSEEAVEVLGKLNDMGVIPVLF----E 281 (427)
Q Consensus 208 ~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~v-DAN~~~s~~~A~~~l~~L~~~~l~~~~i----E 281 (427)
..+.++.+++.|+..+-+..+. +.+...+.++++|+..|++.+.+ +. -+.++|....+. |.. +| +
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v---~t~~~a~~l~~a----Gad--~I~vg~~ 326 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV---VTAAQAKNLIDA----GVD--GLRVGMG 326 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE---CSHHHHHHHHHH----TCS--EEEECSS
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc---chHHHHHHHHHc----CCC--EEEECCC
Confidence 4566777888999999987764 34455688999999877777765 33 567776555443 221 12 0
Q ss_pred -------CCCC-CC-----ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 282 -------QPVH-RD-----DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 282 -------qP~~-~~-----d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
.... .+ .+...++++ +..++||.++=-+.+..++.+++..+ ++.+++=-.
T Consensus 327 ~G~~~~t~~~~~~g~~~~~~~~~~~~~~----~~~~ipVia~GGI~~~~di~kala~G-Ad~V~iG~~ 389 (514)
T 1jcn_A 327 CGSICITQEVMACGRPQGTAVYKVAEYA----RRFGVPIIADGGIQTVGHVVKALALG-ASTVMMGSL 389 (514)
T ss_dssp CSCCBTTBCCCSCCCCHHHHHHHHHHHH----GGGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTT
T ss_pred CCcccccccccCCCccchhHHHHHHHHH----hhCCCCEEEECCCCCHHHHHHHHHcC-CCeeeECHH
Confidence 0110 00 123334444 35789999998999999999999987 788876443
No 218
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=68.04 E-value=43 Score=31.31 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCc---------------EEEEeCCCCCCHHHHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHC---------------SFILDANEGYTSEEAVEVLG 268 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~---------------~L~vDAN~~~s~~~A~~~l~ 268 (427)
++++..+.+.++.+.|-..+|+--| ++-.++|+++.+.+-.+ .+++=+.. =..+++++.++
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg---~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt-~~a~~~i~rA~ 168 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGG---VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRG-GKAQALLNDAK 168 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECS---GGGHHHHHHHHHTTCCEEEEEESCGGGTTC------------CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCc---HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeCh-HHHHHHHHHHH
Confidence 6888888888888899999999977 34577888888865211 12221222 13588999999
Q ss_pred HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 269 ~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
++++.|-...++|-+ +. +..+++++ ..++|+..
T Consensus 169 a~~eAGA~~ivlE~v-p~---~~a~~it~----~l~iP~ig 201 (275)
T 1o66_A 169 AHDDAGAAVVLMECV-LA---ELAKKVTE----TVSCPTIG 201 (275)
T ss_dssp HHHHTTCSEEEEESC-CH---HHHHHHHH----HCSSCEEE
T ss_pred HHHHcCCcEEEEecC-CH---HHHHHHHH----hCCCCEEE
Confidence 999988665688874 32 45677876 57788754
No 219
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=67.93 E-value=74 Score=29.99 Aligned_cols=145 Identities=11% Similarity=0.189 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec-----c---CCchhhHHHH----HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV-----G---RNITADFDVL----QAIHAVHPHCSFILDANEGYTSEEAVEVLGKLN 271 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi-----G---~~~~~d~~~l----~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~ 271 (427)
+++.+.+.+++++++|-..|.+-. | .+.+++++++ +++++.. ++.|.||. |+++-+.+-++.
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT---~~~~V~~aAl~a-- 134 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDT---YKAEVAKQAIEA-- 134 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEEC---SCHHHHHHHHHH--
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeC---CCHHHHHHHHHc--
Confidence 467778899999999999988874 2 1346677654 4445433 78999997 466665555554
Q ss_pred hCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCC--CCC----H----HHH----HHHHHcCC-CcEEEeCCC
Q 014285 272 DMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES--CRS----L----NDV----QKVMQENL-ASVVNIKLA 336 (427)
Q Consensus 272 ~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~--~~~----~----~~~----~~ll~~~a-~~~i~lk~~ 336 (427)
|.. .|-.=-.....+++.++++ +.+.|+.+==. ... . ..+ +.+.+.+- .+=|++||.
T Consensus 135 --Ga~--iINdvsg~~~d~~m~~~aa----~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg 206 (297)
T 1tx2_A 135 --GAH--IINDIWGAKAEPKIAEVAA----HYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPG 206 (297)
T ss_dssp --TCC--EEEETTTTSSCTHHHHHHH----HHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred --CCC--EEEECCCCCCCHHHHHHHH----HhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCC
Confidence 332 3433221111356777765 56777765211 111 1 112 33334332 224788986
Q ss_pred C-cc--HHH---HHHHHHHHHHcCCcEEEccc
Q 014285 337 K-FG--VLG---TLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 337 ~-~G--i~~---~~~~~~~A~~~gi~~~~~s~ 362 (427)
. .| ... .++-++..++.|.++.++-.
T Consensus 207 ~Gfgk~~~~n~~ll~~l~~l~~lg~Pvl~G~S 238 (297)
T 1tx2_A 207 IGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTS 238 (297)
T ss_dssp TTSSCCHHHHHHHHHTGGGGGGGCSCBEEECT
T ss_pred CCcCCCHHHHHHHHHHHHHHHhCCCCEEEEec
Confidence 5 24 332 23333334457888887653
No 220
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=67.87 E-value=42 Score=31.52 Aligned_cols=115 Identities=13% Similarity=0.195 Sum_probs=74.9
Q ss_pred HHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh----CC--CcE----------EEEeCC-CCCC-HHHHHHHHHHhh
Q 014285 211 LASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV----HP--HCS----------FILDAN-EGYT-SEEAVEVLGKLN 271 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~----~~--~~~----------L~vDAN-~~~s-~~~A~~~l~~L~ 271 (427)
.+.+.++.||+.+-+.... ++++.++..+.+-+. += +.+ +..+.+ ..|| |+||.+|.++..
T Consensus 89 ~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~Tg 168 (286)
T 1gvf_A 89 DIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTG 168 (286)
T ss_dssp HHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHC
Confidence 3445578899999999875 788888887777552 21 111 111222 3454 999999998753
Q ss_pred ----------hCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCC
Q 014285 272 ----------DMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADE-SCRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 272 ----------~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
-.|. |=.+| .-|++-++++++ .+++|+.+.= |=...+++++.++.+ +.=||++.
T Consensus 169 vD~LAvaiGt~HG~---Y~~~p--~Ld~~~L~~I~~----~~~vpLVlHGgSG~~~e~i~~ai~~G-v~KiNi~T 233 (286)
T 1gvf_A 169 VDSLAVAIGTAHGL---YSKTP--KIDFQRLAEIRE----VVDVPLVLHGASDVPDEFVRRTIELG-VTKVNVAT 233 (286)
T ss_dssp CSEEEECSSCCSSC---CSSCC--CCCHHHHHHHHH----HCCSCEEECCCTTCCHHHHHHHHHTT-EEEEEECH
T ss_pred CCEEEeecCccccC---cCCCC--ccCHHHHHHHHH----hcCCCEEEECCCCCCHHHHHHHHHCC-CeEEEECh
Confidence 1232 33333 457888999876 5789998865 666777899999876 44466654
No 221
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=67.79 E-value=80 Score=29.52 Aligned_cols=146 Identities=10% Similarity=0.095 Sum_probs=80.0
Q ss_pred HHHHHhhcCCcEEEEeccC-----------CchhhHHHHH----HHHHhCCCcEEEE----eC--CCCCCHHHHHHHHHH
Q 014285 211 LASKYCKLGFSTLKLNVGR-----------NITADFDVLQ----AIHAVHPHCSFIL----DA--NEGYTSEEAVEVLGK 269 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~-----------~~~~d~~~l~----~ir~~~~~~~L~v----DA--N~~~s~~~A~~~l~~ 269 (427)
.+++.++.|++.+-+-.+. +.++.+++++ ..++.+-.++.-+ ++ -+..+++++.++++.
T Consensus 88 ~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~ 167 (302)
T 2ftp_A 88 GFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARE 167 (302)
T ss_dssp HHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHH
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHH
Confidence 3445567899888774443 3444445443 3334443333222 11 135689999999999
Q ss_pred hhhCCCCCceEeCCCCCCChhhHHHHHHhhcccc-CCeEEec---CCCCCHHHHHHHHHcCCCcEEEeCCC---------
Q 014285 270 LNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVAD---ESCRSLNDVQKVMQENLASVVNIKLA--------- 336 (427)
Q Consensus 270 L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~-~iPIa~d---E~~~~~~~~~~ll~~~a~~~i~lk~~--------- 336 (427)
+.+.+.....+=+-.-........++-+.+++.. ++||.+. -.=.........++.+ ++.|+.=..
T Consensus 168 ~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aG-a~~vd~tv~GlG~cp~a~ 246 (302)
T 2ftp_A 168 LQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEG-IAVFDSSVAGLGGCPYAK 246 (302)
T ss_dssp HHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTT-CCEEEEBGGGCCBCGGGT
T ss_pred HHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhC-CCEEEecccccCCCCCCC
Confidence 8888875334444333334444555544445556 4788653 2333344556677765 566655444
Q ss_pred -CccHHHHHHHHHHHHHcCCcE
Q 014285 337 -KFGVLGTLQIIKATRKSGLHL 357 (427)
Q Consensus 337 -~~Gi~~~~~~~~~A~~~gi~~ 357 (427)
+.|-..+..++...+..|+..
T Consensus 247 gr~GN~~~E~lv~~l~~~g~~~ 268 (302)
T 2ftp_A 247 GATGNVASEDVLYLLNGLEIHT 268 (302)
T ss_dssp TCBCBCBHHHHHHHHHHTTCBC
T ss_pred CCCCChhHHHHHHHHHhcCCCC
Confidence 445333455566666666553
No 222
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=67.36 E-value=30 Score=31.84 Aligned_cols=97 Identities=12% Similarity=0.030 Sum_probs=71.9
Q ss_pred CCHHH-HHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 258 YTSEE-AVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 258 ~s~~~-A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
+++.+ |..+.+. ..++. ..-|++.-.+..+.++++++ .+++||---.-.+...++.++... ++|++-+..+
T Consensus 61 ~~~~~iA~~y~~~--A~~Is-VlTd~~~F~gs~~dL~~ir~----~v~lPvLrKDfi~~~~qi~ea~~~-GAD~ilLi~a 132 (251)
T 1i4n_A 61 ASLEDFIRMYDEL--ADAIS-ILTEKHYFKGDPAFVRAARN----LTCRPILAKDFYIDTVQVKLASSV-GADAILIIAR 132 (251)
T ss_dssp CCHHHHHHHHHHH--CSEEE-EECCCSSSCCCTHHHHHHHT----TCCSCEEEECCCCSTHHHHHHHHT-TCSEEEEEGG
T ss_pred CCHHHHHHHHHHh--CCceE-EEecccccCCCHHHHHHHHH----hCCCCEEEeeCCCCHHHHHHHHHc-CCCEEEEecc
Confidence 45443 4455454 44553 34588888888999998875 689999877777777787775554 5899999988
Q ss_pred CccHHHHHHHHHHHHHcCCcEEEccc
Q 014285 337 KFGVLGTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 337 ~~Gi~~~~~~~~~A~~~gi~~~~~s~ 362 (427)
...-....+.++.|++.|+.+++-..
T Consensus 133 ~l~~~~l~~l~~~a~~lGl~~lvEv~ 158 (251)
T 1i4n_A 133 ILTAEQIKEIYEAAEELGMDSLVEVH 158 (251)
T ss_dssp GSCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEeC
Confidence 76666788899999999999987543
No 223
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=67.22 E-value=82 Score=30.08 Aligned_cols=157 Identities=13% Similarity=0.124 Sum_probs=86.3
Q ss_pred CHHHHHHHHH-HHhhcCCcEEEEeccCCchhhHHHHHHHHH------hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELAS-KYCKLGFSTLKLNVGRNITADFDVLQAIHA------VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~-~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~------~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
+.++..+.++ ++.+.|+..|-+-.+..-+.|.+.++++++ ..++.++.+.....= + +++..+.+..
T Consensus 39 ~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~----i~~a~~~g~~ 111 (337)
T 3ble_A 39 STSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---T----VDWIKDSGAK 111 (337)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---H----HHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---h----HHHHHHCCCC
Confidence 6778888888 888899998887555433567888888887 346777776655421 2 2222222222
Q ss_pred CceEeCCCCCCC--------------hhhHHHHHHhhccccCCeEEecC------CCCCHHHH----HHHHHcCCCcEEE
Q 014285 277 PVLFEQPVHRDD--------------WSGLHDVSNFARDTYGISVVADE------SCRSLNDV----QKVMQENLASVVN 332 (427)
Q Consensus 277 ~~~iEqP~~~~d--------------~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~----~~ll~~~a~~~i~ 332 (427)
+|-=.++..+ ++.+.+..+.++ +.+..+..+= .-.++..+ +.+.+. .++.|.
T Consensus 112 --~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Ga~~i~ 187 (337)
T 3ble_A 112 --VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAI-KSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKE-HIERIF 187 (337)
T ss_dssp --EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHH-HTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTS-CCSEEE
T ss_pred --EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHH-HCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHc-CCCEEE
Confidence 2222222211 233333333332 3456665441 12233322 334444 467777
Q ss_pred eCCCC-cc-HHHHHHHHHHHHH-c-CCcEEEcccCchhHHHHH
Q 014285 333 IKLAK-FG-VLGTLQIIKATRK-S-GLHLMIDGMIETRLATGF 371 (427)
Q Consensus 333 lk~~~-~G-i~~~~~~~~~A~~-~-gi~~~~~s~~es~ig~~a 371 (427)
++=+. .+ .....++++..++ . ++++-+|+-...|++++.
T Consensus 188 l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN 230 (337)
T 3ble_A 188 LPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVAN 230 (337)
T ss_dssp EECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHH
T ss_pred EecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHH
Confidence 75443 23 5556666666544 4 788888886666665553
No 224
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=66.95 E-value=33 Score=32.92 Aligned_cols=102 Identities=16% Similarity=0.152 Sum_probs=68.8
Q ss_pred CCCHHHHHHHHH-HhhhCCCCCceEeC--CCC-CCChhhHHHHHHhhc---cccCCeEEecCCCCCHHHHHHHHHcCCCc
Q 014285 257 GYTSEEAVEVLG-KLNDMGVIPVLFEQ--PVH-RDDWSGLHDVSNFAR---DTYGISVVADESCRSLNDVQKVMQENLAS 329 (427)
Q Consensus 257 ~~s~~~A~~~l~-~L~~~~l~~~~iEq--P~~-~~d~~~~~~L~~~~r---~~~~iPIa~dE~~~~~~~~~~ll~~~a~~ 329 (427)
.++.++-+++++ .|.+.|+. +||= |.. +++|+.++++++... ...++.+..- ..+..+++++++.+ ++
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~--~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l--~~~~~~i~~a~~~g-~~ 111 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVD--RVEIASARVSKGELETVQKIMEWAATEQLTERIEILGF--VDGNKTVDWIKDSG-AK 111 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCS--EEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEE--SSTTHHHHHHHHHT-CC
T ss_pred CcCHHHHHHHHHHHHHHcCCC--EEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEE--ccchhhHHHHHHCC-CC
Confidence 478999999999 99999985 8997 663 677787877765100 1123455442 22334888888876 56
Q ss_pred EEEeCCCCc-------------c-HHHHHHHHHHHHHcCCcEEEcccC
Q 014285 330 VVNIKLAKF-------------G-VLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 330 ~i~lk~~~~-------------G-i~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
.+.+=.+.. - +....++++.|+++|+.+..+.+.
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~ 159 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED 159 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE
Confidence 655422111 1 346778899999999999877643
No 225
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=66.77 E-value=1.7e+02 Score=32.93 Aligned_cols=164 Identities=12% Similarity=0.110 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHHhhc--CCcEEEEeccCC--------chhhHHHHHHHHHhCCCcEEEEeC---CC-CC---CHHHHHHH
Q 014285 204 SPAEASELASKYCKL--GFSTLKLNVGRN--------ITADFDVLQAIHAVHPHCSFILDA---NE-GY---TSEEAVEV 266 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~--Gf~~iKlKiG~~--------~~~d~~~l~~ir~~~~~~~L~vDA---N~-~~---s~~~A~~~ 266 (427)
+.+++.+.++.+.+. ||..+-.--|.. -+.+.++++.+++..|+..+.+=. |. +| ..+--.++
T Consensus 553 ~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~~ 632 (1150)
T 3hbl_A 553 RTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKF 632 (1150)
T ss_dssp CHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCeEEEEeccccccccccCCchhHHHH
Confidence 567888888888777 999888633321 146788999999988877664433 32 33 33334456
Q ss_pred HHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCe----EEecC--------CCCCHHHH----HHHHHcCCCcE
Q 014285 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGIS----VVADE--------SCRSLNDV----QKVMQENLASV 330 (427)
Q Consensus 267 l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iP----Ia~dE--------~~~~~~~~----~~ll~~~a~~~ 330 (427)
+++..+.++...-|=.++ .+...+..+.+.+++ .+.- |+.-+ +.++...+ +.+.+.+ ++.
T Consensus 633 v~~a~~~Gvd~irif~~~--sd~~~~~~~~~~~~e-~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~G-a~~ 708 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSL--NWVDQMKVANEAVQE-AGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREG-FHI 708 (1150)
T ss_dssp HHHHHHTTCCEEEEECTT--CCGGGGHHHHHHHHH-TTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTT-CSE
T ss_pred HHHHHhCCcCEEEEEeeC--CHHHHHHHHHHHHHH-HhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcC-CCe
Confidence 777777776532343444 466666665544332 2211 11111 11333333 4455554 677
Q ss_pred EEeCCCC-cc-HHHHHHHHHHHH-HcCCcEEEcccCchhHHHHH
Q 014285 331 VNIKLAK-FG-VLGTLQIIKATR-KSGLHLMIDGMIETRLATGF 371 (427)
Q Consensus 331 i~lk~~~-~G-i~~~~~~~~~A~-~~gi~~~~~s~~es~ig~~a 371 (427)
|.++=+- .+ ...+.++++..+ ..++++-+|+-...|++.+.
T Consensus 709 i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An 752 (1150)
T 3hbl_A 709 LAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLT 752 (1150)
T ss_dssp EEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHH
T ss_pred eeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHH
Confidence 7775543 33 555666665544 45889999987666666554
No 226
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=66.63 E-value=1.2e+02 Score=31.10 Aligned_cols=164 Identities=12% Similarity=0.135 Sum_probs=97.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCC--------chhhHHHHHHHHHhCCCcEEEEeC---CC-CCC--HHHH-HHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRN--------ITADFDVLQAIHAVHPHCSFILDA---NE-GYT--SEEA-VEVLG 268 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~--------~~~d~~~l~~ir~~~~~~~L~vDA---N~-~~s--~~~A-~~~l~ 268 (427)
+.+++.+.++.+.+.|+..|-+-.|.. .+.|.++++.+++..++..+.+=. |. +|+ ++++ ...++
T Consensus 45 ~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~~ve 124 (539)
T 1rqb_A 45 AMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVD 124 (539)
T ss_dssp CGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHHHHH
Confidence 456667778888889999999876542 356889999999876776654433 32 343 2332 45667
Q ss_pred HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeE--Eec---CCCCCHHHH----HHHHHcCCCcEEEeCCCC-c
Q 014285 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISV--VAD---ESCRSLNDV----QKVMQENLASVVNIKLAK-F 338 (427)
Q Consensus 269 ~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPI--a~d---E~~~~~~~~----~~ll~~~a~~~i~lk~~~-~ 338 (427)
++.+.++. .|-==.+..+.+.+....+.++ +.+..+ ..+ -.-+++..+ +.+.+.+ ++.|.++=+. .
T Consensus 125 ~a~~aGvd--~vrIf~s~sd~~ni~~~i~~ak-~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G-ad~I~L~DT~G~ 200 (539)
T 1rqb_A 125 KSAENGMD--VFRVFDAMNDPRNMAHAMAAVK-KAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMG-ADSIALKDMAAL 200 (539)
T ss_dssp HHHHTTCC--EEEECCTTCCTHHHHHHHHHHH-HTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTT-CSEEEEEETTCC
T ss_pred HHHhCCCC--EEEEEEehhHHHHHHHHHHHHH-HCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcC-CCEEEeCCCCCC
Confidence 77666654 2332223335555555554443 345544 332 233455443 4455554 6888776444 3
Q ss_pred c-HHHHHHHHHHHH-Hc--CCcEEEcccCchhHHHHH
Q 014285 339 G-VLGTLQIIKATR-KS--GLHLMIDGMIETRLATGF 371 (427)
Q Consensus 339 G-i~~~~~~~~~A~-~~--gi~~~~~s~~es~ig~~a 371 (427)
+ .....++++..+ .. ++++-+|+-...|++.+.
T Consensus 201 ~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN 237 (539)
T 1rqb_A 201 LKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVS 237 (539)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHH
Confidence 3 555666665544 44 688998887666666554
No 227
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=66.50 E-value=44 Score=30.69 Aligned_cols=98 Identities=11% Similarity=0.117 Sum_probs=58.2
Q ss_pred CCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCC---------------------hhhHHHHHHhhcccc-CCeEEecC
Q 014285 254 ANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDD---------------------WSGLHDVSNFARDTY-GISVVADE 311 (427)
Q Consensus 254 AN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d---------------------~~~~~~L~~~~r~~~-~iPIa~dE 311 (427)
.+|-.+.++.++.++.|.+.|.. +||==+|..| .+.+-++.+.+|+.. .+||.+=
T Consensus 24 ~~g~p~~~~~~~~~~~l~~~G~D--~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m- 100 (262)
T 2ekc_A 24 MVGYPDYETSLKAFKEVLKNGTD--ILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM- 100 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCS--EEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE-
T ss_pred cCCCCChHHHHHHHHHHHHcCCC--EEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE-
Confidence 47777788888888888888764 6775333222 111222233333456 7898771
Q ss_pred CCCC------HHHH-HHHHHcCCCc-EEEeCCCCccHHHHHHHHHHHHHcCCcEE
Q 014285 312 SCRS------LNDV-QKVMQENLAS-VVNIKLAKFGVLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 312 ~~~~------~~~~-~~ll~~~a~~-~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~ 358 (427)
...+ ...+ +.+.+.+ +| ++.+|.. +.+..++++.++++|+.++
T Consensus 101 ~y~n~v~~~g~~~f~~~~~~aG-~dgvii~dl~---~ee~~~~~~~~~~~gl~~i 151 (262)
T 2ekc_A 101 TYYNPIFRIGLEKFCRLSREKG-IDGFIVPDLP---PEEAEELKAVMKKYVLSFV 151 (262)
T ss_dssp CCHHHHHHHCHHHHHHHHHHTT-CCEEECTTCC---HHHHHHHHHHHHHTTCEEC
T ss_pred ecCcHHHHhhHHHHHHHHHHcC-CCEEEECCCC---HHHHHHHHHHHHHcCCcEE
Confidence 1222 1233 4455555 56 5555543 4678889999999998854
No 228
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=65.18 E-value=40 Score=32.76 Aligned_cols=68 Identities=13% Similarity=0.206 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHH-hhhCCC
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGK-LNDMGV 275 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~-L~~~~l 275 (427)
.|.+...+++.++.++|-..+.+-+- -+++.+.++.||+.. ++.|..|-+ |++..|+..++. ++.+.+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp--~~~~a~al~~I~~~~-~vPlvaDiH--f~~~lal~a~e~G~dklRI 111 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVP--HKEDVEALEEIVKKS-PMPVIADIH--FAPSYAFLSMEKGVHGIRI 111 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECC--SHHHHHHHHHHHHHC-SSCEEEECC--SCHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCC--ChHHHHHHHHHHhcC-CCCEEEeCC--CCHHHHHHHHHhCCCeEEE
Confidence 46778899999999999999888663 367788899998864 588999975 566777776665 555433
No 229
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=64.92 E-value=41 Score=30.47 Aligned_cols=74 Identities=9% Similarity=0.040 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
.+++++..++..-+-+++++.|+|--=...+.+-++++++ .+ .+|+..+=-+.+.+++++++ . .+|.+++--.
T Consensus 137 ~~~e~~~~~a~~a~~~g~~~VYld~sG~~~~~~~i~~i~~----~~~~~Pv~vGGGI~t~e~a~~~~-~-gAD~VVVGSa 210 (228)
T 3vzx_A 137 LNMDDIVAYARVSELLQLPIFYLEYSGVLGDIEAVKKTKA----VLETSTLFYGGGIKDAETAKQYA-E-HADVIVVGNA 210 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECTTSCCCHHHHHHHHH----HCSSSEEEEESSCCSHHHHHHHH-T-TCSEEEECTH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCcCCHHHHHHHHH----hcCCCCEEEeCCCCCHHHHHHHH-h-CCCEEEEChH
Confidence 4578888888777777777779998222346777777765 57 79999999999999999988 4 5888877543
Q ss_pred C
Q 014285 337 K 337 (427)
Q Consensus 337 ~ 337 (427)
.
T Consensus 211 ~ 211 (228)
T 3vzx_A 211 V 211 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 230
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=64.90 E-value=45 Score=31.39 Aligned_cols=114 Identities=11% Similarity=0.202 Sum_probs=76.2
Q ss_pred HHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh--CCC----cEEE--------EeCCC-CCC-HHHHHHHHHHhh---
Q 014285 212 ASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV--HPH----CSFI--------LDANE-GYT-SEEAVEVLGKLN--- 271 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~--~~~----~~L~--------vDAN~-~~s-~~~A~~~l~~L~--- 271 (427)
+.+.++.||+.+-+.... ++++.++..+.+-+. .-+ .+|- ++.++ .|| |+||.+|.++..
T Consensus 96 i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~ 175 (288)
T 3q94_A 96 CKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDC 175 (288)
T ss_dssp HHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSE
T ss_pred HHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCE
Confidence 345567899999998875 788999888877662 112 2221 11222 364 999999998653
Q ss_pred -------hCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCC
Q 014285 272 -------DMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADE-SCRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 272 -------~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
-.|. |=.+ +.-|++-++++.+ .+++|+.+.= |=...++++++++.+ +.=||++.
T Consensus 176 LAvaiGt~HG~---Y~~~--p~Ld~~~L~~I~~----~v~vpLVlHGgSG~~~e~i~~ai~~G-v~KiNi~T 237 (288)
T 3q94_A 176 LAPALGSVHGP---YKGE--PNLGFAEMEQVRD----FTGVPLVLHGGTGIPTADIEKAISLG-TSKINVNT 237 (288)
T ss_dssp EEECSSCBSSC---CSSS--CCCCHHHHHHHHH----HHCSCEEECCCTTCCHHHHHHHHHTT-EEEEEECH
T ss_pred EEEEcCcccCC---cCCC--CccCHHHHHHHHH----hcCCCEEEeCCCCCCHHHHHHHHHcC-CeEEEECh
Confidence 1232 4233 3558888999876 5789998764 667778899999875 44456654
No 231
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=64.83 E-value=18 Score=33.99 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=61.7
Q ss_pred CCCCHHHHHHHHHHhhhCCCCCceEeCCC--CC------CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCC
Q 014285 256 EGYTSEEAVEVLGKLNDMGVIPVLFEQPV--HR------DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENL 327 (427)
Q Consensus 256 ~~~s~~~A~~~l~~L~~~~l~~~~iEqP~--~~------~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a 327 (427)
..++.++.+++++.|.+.|++ +||-=. .+ .|.+. +.+.+++..++++... +.+..+++++++.+
T Consensus 22 ~~~~~e~k~~i~~~L~~~Gv~--~IE~g~~~~~~~~p~~~d~~~---~~~~~~~~~~~~~~~l--~~~~~~i~~a~~ag- 93 (298)
T 2cw6_A 22 NIVSTPVKIKLIDMLSEAGLS--VIETTSFVSPKWVPQMGDHTE---VLKGIQKFPGINYPVL--TPNLKGFEAAVAAG- 93 (298)
T ss_dssp SCCCHHHHHHHHHHHHHTTCS--EECCEECCCTTTCGGGTTHHH---HHHHSCCCTTCBCCEE--CCSHHHHHHHHHTT-
T ss_pred CCCCHHHHHHHHHHHHHcCcC--EEEECCCcCcccccccCCHHH---HHHHHhhCCCCEEEEE--cCCHHhHHHHHHCC-
Confidence 457999999999999999985 899732 11 23332 2222222234554432 35788999999886
Q ss_pred CcEEEeCCCC-------------cc-HHHHHHHHHHHHHcCCcEE
Q 014285 328 ASVVNIKLAK-------------FG-VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 328 ~~~i~lk~~~-------------~G-i~~~~~~~~~A~~~gi~~~ 358 (427)
++.+.+-.+. -+ +..+.+.++.|+++|+.+.
T Consensus 94 ~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~ 138 (298)
T 2cw6_A 94 AKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVR 138 (298)
T ss_dssp CSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5666553221 12 3467788999999999985
No 232
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=64.20 E-value=72 Score=30.10 Aligned_cols=148 Identities=7% Similarity=0.154 Sum_probs=91.9
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC-
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGV- 275 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l- 275 (427)
|.+.+.+.++.+++.|-+.+=+--.. +.++=.+.++.+.+. .+.+.+.+= -++-+..++++..+..++.+.
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaG-vg~~~t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAG-VGTNDTRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEE-CCCSSHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe-CCCcCHHHHHHHHHHHHhcCCC
Confidence 55677788888889998876654321 334445567777774 566778774 466688999999999988753
Q ss_pred CCceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHH
Q 014285 276 IPVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFGVLGTL 344 (427)
Q Consensus 276 ~~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~ 344 (427)
.-..+=-|. ++.+ .+-++++++ .+++||.+=. .-.+...+.++.+ .++++-+|-+- .+....
T Consensus 105 davlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La~--~pnIvgiKdss-d~~~~~ 177 (311)
T 3h5d_A 105 AAGLAIVPYYNKPSQEGMYQHFKAIAD----ASDLPIIIYNIPGRVVVELTPETMLRLAD--HPNIIGVKECT-SLANMA 177 (311)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHH----SCSSCEEEEECHHHHSSCCCHHHHHHHHT--STTEEEEEECS-CHHHHH
T ss_pred cEEEEcCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEecccccCCCCCHHHHHHHhc--CCCEEEEEeCC-CHHHHH
Confidence 312333443 1222 223445554 6789998753 2345666777775 37888898876 655555
Q ss_pred HHHHHHHHcCCcEEEc
Q 014285 345 QIIKATRKSGLHLMID 360 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~ 360 (427)
++++... .++.+..+
T Consensus 178 ~~~~~~~-~~f~v~~G 192 (311)
T 3h5d_A 178 YLIEHKP-EEFLIYTG 192 (311)
T ss_dssp HHHHHCC-SSCEEEEC
T ss_pred HHHHHcC-CCEEEEEC
Confidence 5443321 24555544
No 233
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=63.42 E-value=9.7 Score=35.30 Aligned_cols=117 Identities=11% Similarity=0.048 Sum_probs=72.6
Q ss_pred HHHHHhhcCCcEEEEeccCCchhh-----HHHHHHHHHh-C-CCcEEEEeCC---C--------CCCHH---HHH-HHHH
Q 014285 211 LASKYCKLGFSTLKLNVGRNITAD-----FDVLQAIHAV-H-PHCSFILDAN---E--------GYTSE---EAV-EVLG 268 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~~~~~d-----~~~l~~ir~~-~-~~~~L~vDAN---~--------~~s~~---~A~-~~l~ 268 (427)
.++++. .|.. |+-+|...-+| .++++.+-+. + ..+.+.+|+. + +|... ++. ++++
T Consensus 89 ~~~~~l-~Ga~--~Viigs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~ 165 (260)
T 2agk_A 89 NCLEWL-KWAS--KVIVTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFR 165 (260)
T ss_dssp THHHHT-TTCS--CEEECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHH
T ss_pred HHHHHh-cCCC--EEEECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHH
Confidence 345566 7866 44466432234 6777777664 4 4577888885 3 35321 344 6666
Q ss_pred HhhhCCCCCceE------eCCCCCCChhhHHHHHHhhcccc----CCeEEecCCCCCHHHHHHHHHcC-CCcEEEeCCC
Q 014285 269 KLNDMGVIPVLF------EQPVHRDDWSGLHDVSNFARDTY----GISVVADESCRSLNDVQKVMQEN-LASVVNIKLA 336 (427)
Q Consensus 269 ~L~~~~l~~~~i------EqP~~~~d~~~~~~L~~~~r~~~----~iPIa~dE~~~~~~~~~~ll~~~-a~~~i~lk~~ 336 (427)
.++++ .. ..+ |+=..--|++.++++++ .+ ++||...=-+.+++|++++++.. .++.+.+--.
T Consensus 166 ~~~~~-a~-~il~t~i~~dG~~~G~d~eli~~l~~----~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~a 238 (260)
T 2agk_A 166 ELRKY-TN-EFLIHAADVEGLCGGIDELLVSKLFE----WTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSS 238 (260)
T ss_dssp HHTTT-CS-EEEEEC-------CCCCHHHHHHHHH----HHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTT
T ss_pred HHHHh-cC-EEEEEeeccccCcCCCCHHHHHHHHH----hhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCC
Confidence 66665 32 222 22222337888999986 56 89998888899999999999872 3666666554
No 234
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=63.03 E-value=18 Score=34.30 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=61.1
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeCC--CCC------CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCC
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQP--VHR------DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLA 328 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEqP--~~~------~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~ 328 (427)
.++.++-+++++.|.+.|+. +||-- ..+ .|.+. +.+.+++..++++..= +.+..+++++++.+ +
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~--~IE~g~~~~~~~~p~~~d~~~---~~~~~~~~~~~~~~~l--~~~~~~i~~a~~~g-~ 95 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLS--YIEITSFVHPKWIPALRDAID---VAKGIDREKGVTYAAL--VPNQRGLENALEGG-I 95 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCS--EEEEEECSCTTTCGGGTTHHH---HHHHSCCCTTCEEEEE--CCSHHHHHHHHHHT-C
T ss_pred CCCHHHHHHHHHHHHHcCCC--EEEECCCcCcccccccCCHHH---HHHHhhhcCCCeEEEE--eCCHHhHHHHHhCC-c
Confidence 47899999999999999985 89973 221 12222 2222222345565431 24788999999886 5
Q ss_pred cEEEeCCCC--------c-----c-HHHHHHHHHHHHHcCCcEE
Q 014285 329 SVVNIKLAK--------F-----G-VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 329 ~~i~lk~~~--------~-----G-i~~~~~~~~~A~~~gi~~~ 358 (427)
+.+.+-.+. + . +..+.++++.|+++|+.+.
T Consensus 96 ~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~ 139 (307)
T 1ydo_A 96 NEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTR 139 (307)
T ss_dssp SEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 666542211 1 1 3456888999999999985
No 235
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=62.94 E-value=74 Score=32.36 Aligned_cols=118 Identities=19% Similarity=0.242 Sum_probs=77.1
Q ss_pred HHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEE-eCCCCCCHHHHHHHHHHhhhCCCCCceEeC---
Q 014285 208 ASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFIL-DANEGYTSEEAVEVLGKLNDMGVIPVLFEQ--- 282 (427)
Q Consensus 208 ~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~v-DAN~~~s~~~A~~~l~~L~~~~l~~~~iEq--- 282 (427)
..+.++.+++.|...+-+.... +.+.-++.++.+|+.+|++.+.+ +.+ +.++|....+. +.. +|--
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~---t~e~a~~~~~a----Gad--~i~vg~g 327 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA---TAEATKALIEA----GAN--VVKVGIG 327 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC---SHHHHHHHHHH----TCS--EEEECSS
T ss_pred hHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeec---cHHHHHHHHHh----CCC--EEEECCC
Confidence 3556777888999988887643 44556678999999888766654 433 66666555443 432 3320
Q ss_pred -----------CCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 283 -----------PVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 283 -----------P~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
-+...++..+.++++.+ +..++||.+|=-+.+..|+.+++..+ ++.+++--.
T Consensus 328 ~gsi~~~~~~~g~g~p~~~~l~~v~~~~-~~~~iPVIa~GGI~~~~di~kala~G-A~~V~vGs~ 390 (511)
T 3usb_A 328 PGSICTTRVVAGVGVPQLTAVYDCATEA-RKHGIPVIADGGIKYSGDMVKALAAG-AHVVMLGSM 390 (511)
T ss_dssp CSTTCCHHHHHCCCCCHHHHHHHHHHHH-HTTTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTT
T ss_pred CccccccccccCCCCCcHHHHHHHHHHH-HhCCCcEEEeCCCCCHHHHHHHHHhC-chhheecHH
Confidence 11122455555554322 24689999999999999999999986 677776543
No 236
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=62.72 E-value=1.1e+02 Score=29.51 Aligned_cols=115 Identities=16% Similarity=0.097 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEE-eCCCCCCHHHHHHHHHHhhhCCCCCceEe-
Q 014285 205 PAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFIL-DANEGYTSEEAVEVLGKLNDMGVIPVLFE- 281 (427)
Q Consensus 205 ~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~v-DAN~~~s~~~A~~~l~~L~~~~l~~~~iE- 281 (427)
.+...+.++.+.+.|+..+-+.... ..+.-.+.++.+|+.+|++.+.+ . -.|+++|....+. +.. .|-
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~---V~T~e~A~~a~~a----GaD--~I~V 168 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGN---VATYAGADYLASC----GAD--IIKA 168 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEE---ECSHHHHHHHHHT----TCS--EEEE
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcC---cCCHHHHHHHHHc----CCC--EEEE
Confidence 4556677888889999999887543 23344567889999878888877 3 3578887665443 332 222
Q ss_pred --CCC-----------CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 282 --QPV-----------HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 282 --qP~-----------~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
.|- ...++..+.+.++ ... ||.+|=-+.+..++.+++..+ +|.+++-
T Consensus 169 g~g~G~~~~tr~~~g~g~p~l~aI~~~~~----~~~-PVIAdGGI~~~~di~kALa~G-Ad~V~iG 228 (361)
T 3r2g_A 169 GIGGGSVCSTRIKTGFGVPMLTCIQDCSR----ADR-SIVADGGIKTSGDIVKALAFG-ADFVMIG 228 (361)
T ss_dssp CCSSSSCHHHHHHHCCCCCHHHHHHHHTT----SSS-EEEEESCCCSHHHHHHHHHTT-CSEEEES
T ss_pred cCCCCcCccccccCCccHHHHHHHHHHHH----hCC-CEEEECCCCCHHHHHHHHHcC-CCEEEEC
Confidence 121 0113444444432 222 999999999999999999987 6777764
No 237
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=62.66 E-value=25 Score=33.65 Aligned_cols=114 Identities=15% Similarity=0.178 Sum_probs=70.8
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeC--CC-CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc---CCCcE
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQ--PV-HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE---NLASV 330 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEq--P~-~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~---~a~~~ 330 (427)
.++.++-+++++.|.+.|+. +||= |. .++|++.++++++. ..++.++.= .-.+..++++.++. ...+.
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~--~IE~g~p~~~~~d~e~v~~i~~~---~~~~~i~~l-~r~~~~~i~~a~~al~~ag~~~ 97 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVD--VIEAGFPVSSPGDFNSVVEITKA---VTRPTICAL-TRAKEADINIAGEALRFAKRSR 97 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCS--EEEEECTTSCHHHHHHHHHHHHH---CCSSEEEEE-CCSCHHHHHHHHHHHTTCSSEE
T ss_pred CCCHHHHHHHHHHHHHcCCC--EEEEeCCCCCHhHHHHHHHHHHh---CCCCEEEEe-ecCCHHHHHHHHHhhcccCCCE
Confidence 46888999999999999986 8987 43 23456667777652 234555321 12356677766665 12444
Q ss_pred EEe-------------CCCCcc-HHHHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHH
Q 014285 331 VNI-------------KLAKFG-VLGTLQIIKATRKSGLHLMIDGMIETRLATGFALHLA 376 (427)
Q Consensus 331 i~l-------------k~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hla 376 (427)
|.+ +.+.-- +....++++.|+++|+.+..++..++.......+.++
T Consensus 98 v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~ 157 (325)
T 3eeg_A 98 IHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMV 157 (325)
T ss_dssp EEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHH
T ss_pred EEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHH
Confidence 433 222222 4556789999999999999887655544333333333
No 238
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=62.13 E-value=13 Score=33.82 Aligned_cols=64 Identities=11% Similarity=0.132 Sum_probs=45.7
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc-cH-------HHHHHHHHHHHHcCCcEEEcccCchhH
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF-GV-------LGTLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~-Gi-------~~~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
+.|+.||+|.--.+...+..+.. -.+|+|-+|.+.+ ++ .-...++++|+..|+.++..+ +|+.-
T Consensus 150 ~~G~~ialDdfG~g~ssl~~L~~-l~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viaeG-VEt~~ 221 (259)
T 3s83_A 150 DAGAGLALDDFGTGFSSLSYLTR-LPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAEG-VENAE 221 (259)
T ss_dssp HHTCEEEEECC---CHHHHHHHH-SCCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEECC-CCSHH
T ss_pred HCCCEEEEECCCCCchhHHHHHh-CCCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEEe-CCCHH
Confidence 47999999987667666665554 4689999997655 22 125668899999999999987 57753
No 239
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=61.61 E-value=1.2e+02 Score=29.30 Aligned_cols=128 Identities=22% Similarity=0.263 Sum_probs=78.1
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
+|+...++..+ .+.++.+++.|...+-+.... +.+.-.+.++.+++.. ++.+.+ ...-++++|....+
T Consensus 96 ~pvga~ig~~~----~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Viv--g~v~t~e~A~~l~~---- 164 (361)
T 3khj_A 96 LRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIV--GNVVTEEATKELIE---- 164 (361)
T ss_dssp CCCEEEECTTC----HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEE--EEECSHHHHHHHHH----
T ss_pred ceEEEEeCCCH----HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEE--ccCCCHHHHHHHHH----
Confidence 44445555444 456777788999988776654 3455567888888876 566665 11246777655444
Q ss_pred CCCCCceE-eCC-----------CCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 273 MGVIPVLF-EQP-----------VHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 273 ~~l~~~~i-EqP-----------~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
.+.....+ =.| ....++..+.++++.+ +..++||..+=-+.+..++.+++..+ ++.+++=
T Consensus 165 aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~-~~~~iPVIA~GGI~~~~di~kala~G-Ad~V~vG 236 (361)
T 3khj_A 165 NGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVA-SKFGIPIIADGGIRYSGDIGKALAVG-ASSVMIG 236 (361)
T ss_dssp TTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHH-HHHTCCEEEESCCCSHHHHHHHHHHT-CSEEEES
T ss_pred cCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHH-hhcCCeEEEECCCCCHHHHHHHHHcC-CCEEEEC
Confidence 33321111 011 1112455555554321 24689999998899999999999886 6666643
No 240
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.59 E-value=1.2e+02 Score=29.37 Aligned_cols=121 Identities=23% Similarity=0.293 Sum_probs=77.7
Q ss_pred HHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEe-CCC--
Q 014285 209 SELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE-QPV-- 284 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iE-qP~-- 284 (427)
.+.++.+++.|...+-+.... +.+.-++.++.+++.+|++.+.+ ....++++|.+..+. +....-+- .|-
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~--G~v~t~e~A~~a~~a----GAD~I~vG~gpGs~ 183 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEA----GVSAVKVGIGPGSI 183 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEE--EEECSHHHHHHHHHH----TCSEEEECSSCSTT
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEe--eeeCCHHHHHHHHHc----CCCEEEEecCCCCC
Confidence 455677788999988876532 34556778899999888877765 123578887776554 22101120 011
Q ss_pred ---------CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 285 ---------HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 285 ---------~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
...++..+.++++.+ +..++||..+=-+.+..++.+++..+ ++.+++--..
T Consensus 184 ~~tr~~~g~g~p~~~~l~~v~~~~-~~~~iPVIA~GGI~~~~di~kala~G-Ad~V~vGs~f 243 (366)
T 4fo4_A 184 CTTRIVTGVGVPQITAIADAAGVA-NEYGIPVIADGGIRFSGDISKAIAAG-ASCVMVGSMF 243 (366)
T ss_dssp BCHHHHHCCCCCHHHHHHHHHHHH-GGGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTT
T ss_pred CCcccccCcccchHHHHHHHHHHH-hhcCCeEEEeCCCCCHHHHHHHHHcC-CCEEEEChHh
Confidence 112445555554322 24689999998899999999999987 5777765443
No 241
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=61.33 E-value=78 Score=29.91 Aligned_cols=148 Identities=11% Similarity=0.121 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|...+=+-- |- +.++=.+.++.+.+ ....+.+.+=+. . +.+++++..+..++.|..
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg-~-~t~~ai~la~~A~~~Gad 108 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG-Y-ATSTAIELGNAAKAAGAD 108 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC-c-CHHHHHHHHHHHHhcCCC
Confidence 567778889999999987754432 21 33444556777776 456788888774 5 999999999999887654
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccCCeEEecC--CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYGISVVADE--SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIK 348 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~iPIa~dE--~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~ 348 (427)
-..+=-|.. +.+ ++-++++++ .+++||.+=. .-.+.+.+.++. .-++++-+|-+- | +....++++
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~g~~l~~~~~~~La--~~pnIvgiKdss-gd~~~~~~~~~ 181 (316)
T 3e96_A 109 AVMIHMPIHPYVTAGGVYAYFRDIIE----ALDFPSLVYFKDPEISDRVLVDLA--PLQNLVGVKYAI-NDLPRFAKVVR 181 (316)
T ss_dssp EEEECCCCCSCCCHHHHHHHHHHHHH----HHTSCEEEEECCTTSCTHHHHHHT--TCTTEEEEEECC-CCHHHHHHHHT
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEeCCCCCCHHHHHHHH--cCCCEEEEEeCC-CCHHHHHHHHH
Confidence 223333442 122 223455554 5789998754 234556667776 357899999874 6 776666554
Q ss_pred HHHHcCCc-EEEc
Q 014285 349 ATRKSGLH-LMID 360 (427)
Q Consensus 349 ~A~~~gi~-~~~~ 360 (427)
.....+.. +..+
T Consensus 182 ~~~~~~f~~v~~G 194 (316)
T 3e96_A 182 SIPEEHQIAWICG 194 (316)
T ss_dssp TSCGGGCCEEEET
T ss_pred hcCCCCceEEEeC
Confidence 33222344 4444
No 242
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=61.27 E-value=39 Score=30.81 Aligned_cols=105 Identities=11% Similarity=0.097 Sum_probs=58.7
Q ss_pred CCCCCHHHHHHHHHHhhhCCCCCceEeC--CCCC-------------------CChhhHHHHHHhhccccCCeEEecCCC
Q 014285 255 NEGYTSEEAVEVLGKLNDMGVIPVLFEQ--PVHR-------------------DDWSGLHDVSNFARDTYGISVVADESC 313 (427)
Q Consensus 255 N~~~s~~~A~~~l~~L~~~~l~~~~iEq--P~~~-------------------~d~~~~~~L~~~~r~~~~iPIa~dE~~ 313 (427)
++..+.++..+.++.+.+.|.. +||= |+.. -+.+...++.+.+|+.+++||.+-- .
T Consensus 26 ~g~~~~~~~~~~~~~l~~~Gad--~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~-~ 102 (262)
T 1rd5_A 26 AGDPDLATTAEALRLLDGCGAD--VIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLS-Y 102 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCS--SEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEEC-C
T ss_pred CCCCCHHHHHHHHHHHHHcCCC--EEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEe-c
Confidence 5555667777777777776654 5554 3320 0223233344444456788986521 1
Q ss_pred CCHH---HHHHHHHcCCCcEEEe-CCCCccHHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 314 RSLN---DVQKVMQENLASVVNI-KLAKFGVLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 314 ~~~~---~~~~ll~~~a~~~i~l-k~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
.++. .++.+.+.+ +|.+.+ |. .+....++++.++++|++..++....+.
T Consensus 103 ~~~~~~~~~~~a~~aG-adgv~v~d~---~~~~~~~~~~~~~~~g~~~i~~~a~~t~ 155 (262)
T 1rd5_A 103 YKPIMFRSLAKMKEAG-VHGLIVPDL---PYVAAHSLWSEAKNNNLELVLLTTPAIP 155 (262)
T ss_dssp SHHHHSCCTHHHHHTT-CCEEECTTC---BTTTHHHHHHHHHHTTCEECEEECTTSC
T ss_pred CcHHHHHHHHHHHHcC-CCEEEEcCC---ChhhHHHHHHHHHHcCCceEEEECCCCC
Confidence 2221 223466665 565554 32 2446778888999999997766544443
No 243
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=60.45 E-value=33 Score=31.72 Aligned_cols=78 Identities=10% Similarity=0.139 Sum_probs=63.4
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEE
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~ 358 (427)
.=|++.-.+.++.+.++++ .+++||---+-+++..++.+.-..+ +|.|.+-.+...-....++.++|+..|+.+.
T Consensus 83 LTd~~~F~Gs~~~L~~vr~----~v~lPvLrKDFiid~yQI~eAr~~G-ADaILLI~a~L~~~~l~~l~~~A~~lGl~~L 157 (258)
T 4a29_A 83 TTEEKYFNGSYETLRKIAS----SVSIPILMSDFIVKESQIDDAYNLG-ADTVLLIVKILTERELESLLEYARSYGMEPL 157 (258)
T ss_dssp ECCSTTTCCCHHHHHHHHT----TCSSCEEEESCCCSHHHHHHHHHHT-CSEEEEEGGGSCHHHHHHHHHHHHHTTCCCE
T ss_pred eCCCCCCCCCHHHHHHHHH----hcCCCEeeccccccHHHHHHHHHcC-CCeeehHHhhcCHHHHHHHHHHHHHHhHHHH
Confidence 3488888899999988864 6899999888999999987766654 7888887777676678899999999999987
Q ss_pred Ecc
Q 014285 359 IDG 361 (427)
Q Consensus 359 ~~s 361 (427)
+-.
T Consensus 158 vEV 160 (258)
T 4a29_A 158 ILI 160 (258)
T ss_dssp EEE
T ss_pred Hhc
Confidence 543
No 244
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=59.10 E-value=1.3e+02 Score=28.99 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=47.3
Q ss_pred CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC----Ccc-HHHHHHHHHHHHHc--CCcEEE
Q 014285 287 DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA----KFG-VLGTLQIIKATRKS--GLHLMI 359 (427)
Q Consensus 287 ~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~----~~G-i~~~~~~~~~A~~~--gi~~~~ 359 (427)
-.|+.++++++ .+++||..-+. .+.++.+.+.+.+ +|+|.+.-. .-| .....-+.+++++. .++++.
T Consensus 204 ~~w~~i~~lr~----~~~~PvivK~v-~~~e~A~~a~~~G-aD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia 277 (352)
T 3sgz_A 204 FCWNDLSLLQS----ITRLPIILKGI-LTKEDAELAMKHN-VQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYM 277 (352)
T ss_dssp CCHHHHHHHHH----HCCSCEEEEEE-CSHHHHHHHHHTT-CSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEE
T ss_pred CCHHHHHHHHH----hcCCCEEEEec-CcHHHHHHHHHcC-CCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEE
Confidence 46888888875 57899987654 6788888887765 888876321 012 22222233333443 689988
Q ss_pred cccCchhH
Q 014285 360 DGMIETRL 367 (427)
Q Consensus 360 ~s~~es~i 367 (427)
.+-+.++-
T Consensus 278 ~GGI~~g~ 285 (352)
T 3sgz_A 278 DGGVRTGT 285 (352)
T ss_dssp ESSCCSHH
T ss_pred ECCCCCHH
Confidence 87666643
No 245
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=58.94 E-value=1.9e+02 Score=30.77 Aligned_cols=165 Identities=13% Similarity=0.102 Sum_probs=93.5
Q ss_pred CCHHHHHHHHHHHhhc--CCcEEEEeccCC--------chhhHHHHHHHHHhCCCcEEEEeCCC----CC---CHHHHHH
Q 014285 203 VSPAEASELASKYCKL--GFSTLKLNVGRN--------ITADFDVLQAIHAVHPHCSFILDANE----GY---TSEEAVE 265 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~--Gf~~iKlKiG~~--------~~~d~~~l~~ir~~~~~~~L~vDAN~----~~---s~~~A~~ 265 (427)
.+.+++.+.++.+.+. ||..|-+--|.. -+.+.++++.+++..|+..+.+=+.+ +| ...-...
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~~ 201 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVFK 201 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHHHHHHHHHHHcccchHHHHhcccccccccccCCcchHH
Confidence 3678888888888777 577777653322 24678899999998787666532222 23 2332345
Q ss_pred HHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEE----ec---CC----CCCHHHH----HHHHHcCCCcE
Q 014285 266 VLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVV----AD---ES----CRSLNDV----QKVMQENLASV 330 (427)
Q Consensus 266 ~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa----~d---E~----~~~~~~~----~~ll~~~a~~~ 330 (427)
.++...+.++. .|-=.....+++.+....+.++ +.+.-+. .. |+ .+++..+ +.+.+.+ ++.
T Consensus 202 ~i~~a~~~Gvd--~irIf~s~n~l~~l~~~i~~ak-~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~G-a~~ 277 (718)
T 3bg3_A 202 FCEVAKENGMD--VFRVFDSLNYLPNMLLGMEAAG-SAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAG-THI 277 (718)
T ss_dssp HHHHHHHHTCC--EEEEECSSCCHHHHHHHHHHHH-TTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHT-CSE
T ss_pred HHHHHHhcCcC--EEEEEecHHHHHHHHHHHHHHH-HcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcC-CCE
Confidence 66666555544 2221223345666655544443 2344432 22 22 2344433 4455665 677
Q ss_pred EEeCCCC-cc-HHHHHHHHHHHH-Hc-CCcEEEcccCchhHHHHH
Q 014285 331 VNIKLAK-FG-VLGTLQIIKATR-KS-GLHLMIDGMIETRLATGF 371 (427)
Q Consensus 331 i~lk~~~-~G-i~~~~~~~~~A~-~~-gi~~~~~s~~es~ig~~a 371 (427)
|.++=+. .. .....++++..+ .. ++++-+|+-...|++.+.
T Consensus 278 I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvAN 322 (718)
T 3bg3_A 278 LCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAA 322 (718)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHH
T ss_pred EEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHH
Confidence 7765444 33 556666666554 44 688999987666666554
No 246
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=58.42 E-value=90 Score=26.91 Aligned_cols=150 Identities=17% Similarity=0.128 Sum_probs=78.8
Q ss_pred ecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCC-HHHHHHHHHHhhhCCCCCc
Q 014285 200 IPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYT-SEEAVEVLGKLNDMGVIPV 278 (427)
Q Consensus 200 i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s-~~~A~~~l~~L~~~~l~~~ 278 (427)
+...+.++..+.++++.+ |...+|+-.+.....-.+.++.+|+.+|+..+.+|.- .++ +++ +++.+.+.+..
T Consensus 7 ~d~~~~~~~~~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~-~~di~~~---~~~~a~~~Gad-- 79 (207)
T 3ajx_A 7 IDLLSTEAALELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKAHPDKIVFADMK-TMDAGEL---EADIAFKAGAD-- 79 (207)
T ss_dssp ECCSCHHHHHHHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEE-ECSCHHH---HHHHHHHTTCS--
T ss_pred eCCCCHHHHHHHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEE-ecCccHH---HHHHHHhCCCC--
Confidence 334577888888888766 8788777443222334567888998877777777775 345 555 34445555543
Q ss_pred eEe-CCCCC-CChhhHHHHHHhhccccCCeEEecC-CCCCHHH-HHHHHHcCCCcEEEeCCCC----cc--HHHHHHHHH
Q 014285 279 LFE-QPVHR-DDWSGLHDVSNFARDTYGISVVADE-SCRSLND-VQKVMQENLASVVNIKLAK----FG--VLGTLQIIK 348 (427)
Q Consensus 279 ~iE-qP~~~-~d~~~~~~L~~~~r~~~~iPIa~dE-~~~~~~~-~~~ll~~~a~~~i~lk~~~----~G--i~~~~~~~~ 348 (427)
++= -+... +..+...+.++ +.++++...= +..++.+ ++.+.+. .+|++-+.++. .| ..+ .++.+
T Consensus 80 ~v~vh~~~~~~~~~~~~~~~~----~~g~~~gv~~~s~~~p~~~~~~~~~~-g~d~v~~~~~~~~~~~g~~~~~-~~i~~ 153 (207)
T 3ajx_A 80 LVTVLGSADDSTIAGAVKAAQ----AHNKGVVVDLIGIEDKATRAQEVRAL-GAKFVEMHAGLDEQAKPGFDLN-GLLAA 153 (207)
T ss_dssp EEEEETTSCHHHHHHHHHHHH----HHTCEEEEECTTCSSHHHHHHHHHHT-TCSEEEEECCHHHHTSTTCCTH-HHHHH
T ss_pred EEEEeccCChHHHHHHHHHHH----HcCCceEEEEecCCChHHHHHHHHHh-CCCEEEEEecccccccCCCchH-HHHHH
Confidence 332 22222 12223333332 2366653311 2235555 4444443 58888454443 33 222 33333
Q ss_pred HHHHcCCcEEEcccC
Q 014285 349 ATRKSGLHLMIDGMI 363 (427)
Q Consensus 349 ~A~~~gi~~~~~s~~ 363 (427)
.... ++++++.+-.
T Consensus 154 ~~~~-~~pi~v~GGI 167 (207)
T 3ajx_A 154 GEKA-RVPFSVAGGV 167 (207)
T ss_dssp HHHH-TSCEEEESSC
T ss_pred hhCC-CCCEEEECCc
Confidence 3333 7787766533
No 247
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=57.98 E-value=1.4e+02 Score=28.93 Aligned_cols=128 Identities=13% Similarity=0.251 Sum_probs=68.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQP 283 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP 283 (427)
++++..+.+++.++.+--.+-+-+|.. ..+.++++.+.+.+.++ +.+|..++.+ +..++.+
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~vg~~-~~~~~~~~~lieaGvd~-I~idta~G~~-~~~~~~I---------------- 140 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAVGAA-PGNEERVKALVEAGVDV-LLIDSSHGHS-EGVLQRI---------------- 140 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEECCSC-TTCHHHHHHHHHTTCSE-EEEECSCTTS-HHHHHHH----------------
T ss_pred CHHHHHHHHHHHHhcCceeEEEEeccC-hhHHHHHHHHHhCCCCE-EEEeCCCCCC-HHHHHHH----------------
Confidence 566666666665554311111222221 23455666666666553 5566544332 1222222
Q ss_pred CCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeC--CCC---------cc---HHHHHHHHH
Q 014285 284 VHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIK--LAK---------FG---VLGTLQIIK 348 (427)
Q Consensus 284 ~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk--~~~---------~G---i~~~~~~~~ 348 (427)
+++++ .. ++||..+ ++.+..+.+++.+.+ +|+|.+- +.- +| ++...++.+
T Consensus 141 ---------~~ik~----~~p~v~Vi~G-~v~t~e~A~~a~~aG-AD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~ 205 (366)
T 4fo4_A 141 ---------RETRA----AYPHLEIIGG-NVATAEGARALIEAG-VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAG 205 (366)
T ss_dssp ---------HHHHH----HCTTCEEEEE-EECSHHHHHHHHHHT-CSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHH
T ss_pred ---------HHHHH----hcCCCceEee-eeCCHHHHHHHHHcC-CCEEEEecCCCCCCCcccccCcccchHHHHHHHHH
Confidence 33332 22 5676543 467888888888875 8888772 211 12 333445556
Q ss_pred HHHHcCCcEEEcccCch
Q 014285 349 ATRKSGLHLMIDGMIET 365 (427)
Q Consensus 349 ~A~~~gi~~~~~s~~es 365 (427)
.++..+++++..+-+.+
T Consensus 206 ~~~~~~iPVIA~GGI~~ 222 (366)
T 4fo4_A 206 VANEYGIPVIADGGIRF 222 (366)
T ss_dssp HHGGGTCCEEEESCCCS
T ss_pred HHhhcCCeEEEeCCCCC
Confidence 66678999998765533
No 248
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=57.79 E-value=42 Score=30.13 Aligned_cols=63 Identities=11% Similarity=0.157 Sum_probs=47.0
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-H-------HHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-V-------LGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i-------~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
+.|+.|++|.--.+...+..+.. -.+|+|-+|.+.+. + .-...++.+|+..|+.++..+ +|+.
T Consensus 154 ~~G~~ialDdfG~g~s~l~~L~~-l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viaeG-VEt~ 224 (250)
T 4f3h_A 154 AMGCKVGLEQFGSGLDSFQLLAH-FQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAEF-VADA 224 (250)
T ss_dssp TTTCEEEEEEETSSTHHHHHHTT-SCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEECC-CCCH
T ss_pred HCCCEEEEeCCCCCchHHHHHhh-CCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEec-cCCH
Confidence 57999999987677667655544 46999999965542 2 225667899999999999887 5764
No 249
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=57.67 E-value=1.4e+02 Score=28.89 Aligned_cols=87 Identities=15% Similarity=0.300 Sum_probs=50.4
Q ss_pred HHHHHhCCCcEEEEeCC-----CCCCHHHHHHHHHHhhhCCCCCceEe--------CCCCCCC-----hhhHHHHHHhhc
Q 014285 239 QAIHAVHPHCSFILDAN-----EGYTSEEAVEVLGKLNDMGVIPVLFE--------QPVHRDD-----WSGLHDVSNFAR 300 (427)
Q Consensus 239 ~~ir~~~~~~~L~vDAN-----~~~s~~~A~~~l~~L~~~~l~~~~iE--------qP~~~~d-----~~~~~~L~~~~r 300 (427)
+.+|+..|+..+..--+ ++|+++++.+.++.+.. +. .+|. +|=...| ++.+++++
T Consensus 111 ~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a-~a--l~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~---- 183 (368)
T 3vkj_A 111 AIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEA-DA--IAVHLNPAQEVFQPEGEPEYQIYALEKLRDIS---- 183 (368)
T ss_dssp HHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTC-SE--EEEECCHHHHHHSSSCCCBCBTHHHHHHHHHH----
T ss_pred HHHHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcC-CC--eEEEecchhhhhCCCCCchhhHHHHHHHHHHH----
Confidence 34566556654333222 33777777777666632 21 1222 1211122 33445554
Q ss_pred cccCCeEEecCCC---CCHHHHHHHHHcCCCcEEEeC
Q 014285 301 DTYGISVVADESC---RSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 301 ~~~~iPIa~dE~~---~~~~~~~~ll~~~a~~~i~lk 334 (427)
+.+++||..-| + .+.++.+.+.+.+ +|+|.+.
T Consensus 184 ~~~~vPVivK~-vG~g~s~~~A~~l~~aG-ad~I~V~ 218 (368)
T 3vkj_A 184 KELSVPIIVKE-SGNGISMETAKLLYSYG-IKNFDTS 218 (368)
T ss_dssp TTCSSCEEEEC-SSSCCCHHHHHHHHHTT-CCEEECC
T ss_pred HHcCCCEEEEe-CCCCCCHHHHHHHHhCC-CCEEEEe
Confidence 47899999987 4 6888888888765 8888774
No 250
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=57.57 E-value=20 Score=33.79 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=47.2
Q ss_pred ccCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCCCCcc----HHHHHHHHHHHHHcCCcEE
Q 014285 302 TYGISVVADE-SCRSLNDVQKVMQENLASVVNIKLAKFG----VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 302 ~~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~~~~G----i~~~~~~~~~A~~~gi~~~ 358 (427)
+.++||++.= ...+.+.+++.++.+ ++.+.+|.|..= +..++++.++|+++|+.+-
T Consensus 72 ~~~VPValHlDHg~~~e~i~~ai~~G-FtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVE 132 (286)
T 1gvf_A 72 TYNMPLALHLDHHESLDDIRRKVHAG-VRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVE 132 (286)
T ss_dssp HTTSCBEEEEEEECCHHHHHHHHHTT-CCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hCCCcEEEEcCCCCCHHHHHHHHHcC-CCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 5789998863 556788889999986 899999999873 7779999999999999884
No 251
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=57.33 E-value=1.2e+02 Score=28.11 Aligned_cols=150 Identities=11% Similarity=0.100 Sum_probs=95.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|-+.+=+-- |- ..++=.+.++.+.+ ....+.+.+= -++-+.+++++..+..++.|..
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaG-vg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAG-TGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE-CCCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEe-CCcccHHHHHHHHHHHHHcCCC
Confidence 566778888888999988875443 21 23444556777777 4567778773 4567889999999999887654
Q ss_pred CceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|. ++.+ .+-++++++ .+++||.+=. .-.+.+.+.++.+ .++++-+|-+- | +....
T Consensus 100 avlv~~P~y~~~~~~~l~~~f~~ia~----a~~lPiilYn~P~~tg~~l~~~~~~~La~--~pnivgiK~ss-gd~~~~~ 172 (292)
T 3daq_A 100 AIMLITPYYNKTNQRGLVKHFEAIAD----AVKLPVVLYNVPSRTNMTIEPETVEILSQ--HPYIVALKDAT-NDFEYLE 172 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HHCSCEEEEECHHHHSCCCCHHHHHHHHT--STTEEEEEECC-CCHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEecccccCCCCCHHHHHHHhc--CCCEEEEEeCC-CCHHHHH
Confidence 22344443 2222 223445554 5789998753 2355666777775 47889999864 6 76666
Q ss_pred HHHHHHHHcCCcEEEcc
Q 014285 345 QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~s 361 (427)
++++.....++.+..+.
T Consensus 173 ~~~~~~~~~~f~v~~G~ 189 (292)
T 3daq_A 173 EVKKRIDTNSFALYSGN 189 (292)
T ss_dssp HHHTTSCTTTSEEEESC
T ss_pred HHHHHCCCCCEEEEECC
Confidence 66544432246665543
No 252
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=57.32 E-value=45 Score=33.50 Aligned_cols=79 Identities=9% Similarity=-0.005 Sum_probs=64.2
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEE
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~ 358 (427)
.=|++.-.+..+.++++++ .+.+||---+-++...++.++... .+|+|-+..+...-....++++.|++.|+.++
T Consensus 87 LTd~~~F~gs~~dL~~vr~----~v~lPvLrKDFI~d~~Qi~ea~~~-GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~L 161 (452)
T 1pii_A 87 LTDEKYFQGSFNFLPIVSQ----IAPQPILCKDFIIDPYQIYLARYY-QADACLLMLSVLDDDQYRQLAAVAHSLEMGVL 161 (452)
T ss_dssp ECCSTTTCCCTTHHHHHHH----HCCSCEEEESCCCSHHHHHHHHHT-TCSEEEEETTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred EecccccCCCHHHHHHHHH----hcCCCeEEEeccCCHHHHHHHHHc-CCCEEEEEcccCCHHHHHHHHHHHHHcCCeEE
Confidence 4488888888899998875 678999877788888888775554 58999999998776678889999999999998
Q ss_pred Eccc
Q 014285 359 IDGM 362 (427)
Q Consensus 359 ~~s~ 362 (427)
+-..
T Consensus 162 vEvh 165 (452)
T 1pii_A 162 TEVS 165 (452)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 7543
No 253
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=57.20 E-value=46 Score=32.72 Aligned_cols=46 Identities=13% Similarity=0.226 Sum_probs=31.5
Q ss_pred HHHHHHHhhcCCcEEEEeccC---------------------Cch----hhHHHHHHHHH-hCCC-cEEEEeC
Q 014285 209 SELASKYCKLGFSTLKLNVGR---------------------NIT----ADFDVLQAIHA-VHPH-CSFILDA 254 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~---------------------~~~----~d~~~l~~ir~-~~~~-~~L~vDA 254 (427)
.+.|+..+++||..|-|+.+. +++ --++.+++||+ ++++ +-+|+-+
T Consensus 175 ~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~ 247 (400)
T 4gbu_A 175 VQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSP 247 (400)
T ss_dssp HHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEecc
Confidence 345667788999999999852 111 12678899998 4655 5667744
No 254
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=56.89 E-value=18 Score=31.67 Aligned_cols=95 Identities=21% Similarity=0.225 Sum_probs=61.2
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCC---CCChhhHHHHHHhhccccCCeEEecCCCC-CHHH-HHHHHHcCCCcEEE
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVH---RDDWSGLHDVSNFARDTYGISVVADESCR-SLND-VQKVMQENLASVVN 332 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~---~~d~~~~~~L~~~~r~~~~iPIa~dE~~~-~~~~-~~~ll~~~a~~~i~ 332 (427)
.+.+++++.++.+.+ ++ .+||.-.+ ..-.+..+++++. .+++||..|=.+. .... ++.+.+.+ +|++.
T Consensus 10 ~~~~~~~~~~~~~~~-~~--diie~G~p~~~~~g~~~i~~ir~~---~~~~~i~~~~~~~~~~~~~~~~~~~~G-ad~v~ 82 (211)
T 3f4w_A 10 LTLPEAMVFMDKVVD-DV--DIIEVGTPFLIREGVNAIKAIKEK---YPHKEVLADAKIMDGGHFESQLLFDAG-ADYVT 82 (211)
T ss_dssp CCHHHHHHHHHHHGG-GC--SEEEECHHHHHHHTTHHHHHHHHH---CTTSEEEEEEEECSCHHHHHHHHHHTT-CSEEE
T ss_pred CCHHHHHHHHHHhhc-Cc--cEEEeCcHHHHhccHHHHHHHHHh---CCCCEEEEEEEeccchHHHHHHHHhcC-CCEEE
Confidence 578999999999964 44 48897432 2234555666541 2578997765433 3444 56666665 67777
Q ss_pred eCCCCccHHHHHHHHHHHHHcCCcEEEc
Q 014285 333 IKLAKFGVLGTLQIIKATRKSGLHLMID 360 (427)
Q Consensus 333 lk~~~~Gi~~~~~~~~~A~~~gi~~~~~ 360 (427)
+-.. .+-....++++.++++|+++.+.
T Consensus 83 v~~~-~~~~~~~~~~~~~~~~g~~~~v~ 109 (211)
T 3f4w_A 83 VLGV-TDVLTIQSCIRAAKEAGKQVVVD 109 (211)
T ss_dssp EETT-SCHHHHHHHHHHHHHHTCEEEEE
T ss_pred EeCC-CChhHHHHHHHHHHHcCCeEEEE
Confidence 7322 23344567888899999998863
No 255
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=56.63 E-value=1.2e+02 Score=30.22 Aligned_cols=94 Identities=11% Similarity=0.126 Sum_probs=57.2
Q ss_pred CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 230 NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 230 ~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
+++.-...++.|++.. ++.|.|| ++++.+.+-++...+-..-+..+ ..++++.+..++. ..+.|+.+
T Consensus 139 dpe~~~~~Vk~V~e~~-dvPlsID----~dp~vleaale~~~d~~pLIns~----t~en~~~~~~la~----~y~~~vV~ 205 (445)
T 2h9a_A 139 DAATFAKAVATAREVT-DLPFILI----GTPEQLAAALETEGANNPLLYAA----TADNYEQMVELAK----KYNVPLTV 205 (445)
T ss_dssp CHHHHHHHHHHHHHHC-CSCEEEE----SCHHHHHHHHHHHGGGCCEEEEE----CTTTHHHHHHHHH----HHTCCEEE
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEE----CCHHHHHHHHHhcCCCCCEEEEC----CHHHHHHHHHHHH----HhCCeEEE
Confidence 3444444566666643 6889999 99988888888877522101222 3458999998886 56777755
Q ss_pred cCCCCCHHHHHHHH---HcCCCcEEEeCCCCc
Q 014285 310 DESCRSLNDVQKVM---QENLASVVNIKLAKF 338 (427)
Q Consensus 310 dE~~~~~~~~~~ll---~~~a~~~i~lk~~~~ 338 (427)
=-. +.+.+++++ ....+.=|++||.--
T Consensus 206 ~~~--~l~~l~~lv~~a~~~Gi~~IiLDP~~~ 235 (445)
T 2h9a_A 206 SAK--GLDALAELVQKITALGYKNLILDPQPE 235 (445)
T ss_dssp ECS--SHHHHHHHHHHHHHTTCCCEEEECCCS
T ss_pred EcC--CHHHHHHHHHHHHHCCCCcEEEcCCch
Confidence 212 566654433 223333456999843
No 256
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=56.34 E-value=52 Score=30.84 Aligned_cols=95 Identities=18% Similarity=0.269 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHHhh-cCCcEEEEeccCCchhhHHHHHHHHHhCCCcE----E---EEeCCCCC-------CHHHHHHHHH
Q 014285 204 SPAEASELASKYCK-LGFSTLKLNVGRNITADFDVLQAIHAVHPHCS----F---ILDANEGY-------TSEEAVEVLG 268 (427)
Q Consensus 204 ~~~~~~~~~~~~~~-~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~----L---~vDAN~~~-------s~~~A~~~l~ 268 (427)
++++..+.+.++.+ .|-..+|+--|. +-.++|+++.+.+-.+- | .+-..++| ..+++++.++
T Consensus 110 s~~~a~~na~rl~~eaGa~aVklEdg~---e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~ 186 (281)
T 1oy0_A 110 GPTAALAAATRFLKDGGAHAVKLEGGE---RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAI 186 (281)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEBSG---GGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCeEEEECCcH---HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHH
Confidence 67777665556555 899999999873 45778888888652110 0 01111223 3578888999
Q ss_pred HhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 269 KLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 269 ~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
++++.|-...++|-. +. +..+++++ ..++|+..
T Consensus 187 a~~eAGA~~ivlE~v-p~---~~a~~it~----~l~iP~ig 219 (281)
T 1oy0_A 187 AVAEAGAFAVVMEMV-PA---ELATQITG----KLTIPTVG 219 (281)
T ss_dssp HHHHHTCSEEEEESC-CH---HHHHHHHH----HCSSCEEE
T ss_pred HHHHcCCcEEEEecC-CH---HHHHHHHH----hCCCCEEE
Confidence 999888655578874 32 45677876 57788754
No 257
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=56.19 E-value=37 Score=31.20 Aligned_cols=89 Identities=16% Similarity=0.113 Sum_probs=61.6
Q ss_pred HHHHHhhhCCCCCceE--eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHH
Q 014285 265 EVLGKLNDMGVIPVLF--EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLG 342 (427)
Q Consensus 265 ~~l~~L~~~~l~~~~i--EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~ 342 (427)
++++..++.|..-..+ |+..-.+..+.++.+++ .+++||....-+.+..++..+.+.+ +|.|.+...... ..
T Consensus 69 ~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~----~v~lPvl~kdfI~d~~qi~~a~~~G-AD~VlL~~~~l~-~~ 142 (254)
T 1vc4_A 69 EAALAYARGGARAVSVLTEPHRFGGSLLDLKRVRE----AVDLPLLRKDFVVDPFMLEEARAFG-ASAALLIVALLG-EL 142 (254)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHH----HCCSCEEEESCCCSHHHHHHHHHTT-CSEEEEEHHHHG-GG
T ss_pred HHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHH----hcCCCEEECCcCCCHHHHHHHHHcC-CCEEEECccchH-HH
Confidence 4555555554321112 44444567778888875 6899999988889998888877765 788877654444 56
Q ss_pred HHHHHHHHHHcCCcEEE
Q 014285 343 TLQIIKATRKSGLHLMI 359 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~~ 359 (427)
..++++.|+..|+.+.+
T Consensus 143 l~~l~~~a~~lGl~~lv 159 (254)
T 1vc4_A 143 TGAYLEEARRLGLEALV 159 (254)
T ss_dssp HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHCCCeEEE
Confidence 77888889999999763
No 258
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=55.58 E-value=1.5e+02 Score=28.43 Aligned_cols=179 Identities=15% Similarity=0.078 Sum_probs=99.2
Q ss_pred hhhhCCCCCceeeeeeec------CCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH-HHHHHhC---CCcEEE--
Q 014285 184 WRLFGGASNSLSTAITIP------AVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVL-QAIHAVH---PHCSFI-- 251 (427)
Q Consensus 184 ~~Llgg~~~~ip~~~~i~------~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l-~~ir~~~---~~~~L~-- 251 (427)
|+-||..--+||.-.... ..+.++..+.++..++.|++.|-.=-.-......+.| +++++.+ .++.|.
T Consensus 39 yr~lG~tg~~vs~iglGt~~~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK 118 (367)
T 3lut_A 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTK 118 (367)
T ss_dssp EEESTTSSCEEESEEEECTTCCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEE
T ss_pred eeecCCCCCcccceeECCccccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCceEEEEec
Confidence 666775544555322211 1256667778888899999987654321111223334 4555532 233332
Q ss_pred EeCC------CCCCHHHHHHHHH-HhhhCC---CCCceEeCCCCCCC----hhhHHHHHHhhccccCCeEEecCCCCCHH
Q 014285 252 LDAN------EGYTSEEAVEVLG-KLNDMG---VIPVLFEQPVHRDD----WSGLHDVSNFARDTYGISVVADESCRSLN 317 (427)
Q Consensus 252 vDAN------~~~s~~~A~~~l~-~L~~~~---l~~~~iEqP~~~~d----~~~~~~L~~~~r~~~~iPIa~dE~~~~~~ 317 (427)
+-.+ ..++++...+-++ .|+.++ +.++++=.|-+... |+.|.+|.+ .+.=-+.|=|.++..
T Consensus 119 ~~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~ 193 (367)
T 3lut_A 119 IFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVIN-----QGMAMYWGTSRWSSM 193 (367)
T ss_dssp ESBCCSSGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHH-----TTSEEEEEEESCCHH
T ss_pred cccCCCCccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHH-----cCCeeEEEecCCCHH
Confidence 2111 2355555443332 233332 22245555544322 445566653 344445566778888
Q ss_pred HHHHHHHc------CCCcEEEeCCCCccHHH-HHHHHHHHHHcCCcEEEcccCchhH
Q 014285 318 DVQKVMQE------NLASVVNIKLAKFGVLG-TLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 318 ~~~~ll~~------~a~~~i~lk~~~~Gi~~-~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
++.++++. ..+.++|+..+..--.. -.++..+|+++||.++..+.+.+|+
T Consensus 194 ~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~ 250 (367)
T 3lut_A 194 EIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGI 250 (367)
T ss_dssp HHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEEECTTGGGG
T ss_pred HHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEEeccccccc
Confidence 88777643 35778888776653111 2368889999999999988776653
No 259
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=55.50 E-value=1.4e+02 Score=28.18 Aligned_cols=151 Identities=14% Similarity=0.115 Sum_probs=96.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|-+.+=+-- |- ..++=.+.++.+.+ ....+.+.+ .-++-+..+++++.+..++.|..
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gad 108 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA-GVGAHSTRQVLEHINDASVAGAN 108 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE-ECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHHcCCC
Confidence 567778889999999988876543 21 33444556777777 466788887 44667899999999999887654
Q ss_pred CceEeCC------CCCCC-hhhHHHHHHhhccccCCeEEecCC-------CCCHHHHHHHHHcCCCcEEEeCCCCcc-HH
Q 014285 277 PVLFEQP------VHRDD-WSGLHDVSNFARDTYGISVVADES-------CRSLNDVQKVMQENLASVVNIKLAKFG-VL 341 (427)
Q Consensus 277 ~~~iEqP------~~~~d-~~~~~~L~~~~r~~~~iPIa~dE~-------~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~ 341 (427)
-..+=-| ..++. ++-++++++ .+++||.+=.. -.+.+.+.++.+. .++++-+|-+- | +.
T Consensus 109 avlv~~P~y~~kp~~~~~l~~~f~~ia~----a~~lPiilYn~P~~t~g~~l~~~~~~~La~~-~pnIvgiKdss-gd~~ 182 (318)
T 3qfe_A 109 YVLVLPPAYFGKATTPPVIKSFFDDVSC----QSPLPVVIYNFPGVCNGIDLDSDMITTIARK-NPNVVGVKLTC-ASVG 182 (318)
T ss_dssp EEEECCCCC---CCCHHHHHHHHHHHHH----HCSSCEEEEECCC----CCCCHHHHHHHHHH-CTTEEEEEESS-CCHH
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHHHHh----hCCCCEEEEeCCcccCCCCCCHHHHHHHHhh-CCCEEEEEeCC-CCHH
Confidence 2233334 22111 233455654 57899977542 1345566777753 37889999864 6 77
Q ss_pred HHHHHHHHHHHcCCcEEEcc
Q 014285 342 GTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 342 ~~~~~~~~A~~~gi~~~~~s 361 (427)
...++++.....++.+..+.
T Consensus 183 ~~~~~~~~~~~~~f~v~~G~ 202 (318)
T 3qfe_A 183 KITRLAATLPPAAFSVFGGQ 202 (318)
T ss_dssp HHHHHHHHSCGGGCEEEESC
T ss_pred HHHHHHHhcCCCCEEEEEec
Confidence 66666554333456665553
No 260
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=54.90 E-value=68 Score=29.82 Aligned_cols=145 Identities=8% Similarity=0.133 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEe-----ccC---CchhhHHHHHHHHH-h-CCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 203 VSPAEASELASKYCKLGFSTLKLN-----VGR---NITADFDVLQAIHA-V-HPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlK-----iG~---~~~~d~~~l~~ir~-~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
.+.+.+.+++++++++|-..|-+- .|. +.+++++|+.-+-+ + .+++.|.||. |.++-|.+.++.
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iSIDT---~~~~Va~~al~a--- 100 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKISVDT---FRSEVAEACLKL--- 100 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEEC---SCHHHHHHHHHH---
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEEEEC---CCHHHHHHHHHh---
Confidence 356778899999999999987763 232 46778887654443 2 4789999995 555555544442
Q ss_pred CCCCCceEeCCCC-CCChhhHHHHHHhhccccCCeEEec----CCCC-C-HHH--------HHHHHHcCC-CcEEEeCCC
Q 014285 273 MGVIPVLFEQPVH-RDDWSGLHDVSNFARDTYGISVVAD----ESCR-S-LND--------VQKVMQENL-ASVVNIKLA 336 (427)
Q Consensus 273 ~~l~~~~iEqP~~-~~d~~~~~~L~~~~r~~~~iPIa~d----E~~~-~-~~~--------~~~ll~~~a-~~~i~lk~~ 336 (427)
|.+ +|=+--. ..| .+|.++++ +.++|+.+= ..-+ + ..+ +..+.+.+- .+-|++||.
T Consensus 101 -Ga~--iINDVs~g~~d-~~m~~~va----~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPG 172 (270)
T 4hb7_A 101 -GVD--MINDQWAGLYD-HRMFQIVA----KYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPG 172 (270)
T ss_dssp -TCC--EEEETTTTSSC-THHHHHHH----HTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred -ccc--eeccccccccc-hhHHHHHH----HcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCC
Confidence 433 4555321 112 46777765 578888762 1111 1 111 133344332 245888997
Q ss_pred Cc-c--HHHHHHH---HHHHHHcCCcEEEcc
Q 014285 337 KF-G--VLGTLQI---IKATRKSGLHLMIDG 361 (427)
Q Consensus 337 ~~-G--i~~~~~~---~~~A~~~gi~~~~~s 361 (427)
.= | ...-+++ ...-+..|.|+.++-
T Consensus 173 iGFgKt~~~N~~ll~~l~~~~~lg~PvLvG~ 203 (270)
T 4hb7_A 173 IGFAKTRNEEAEVMARLDELVATEYPVLLAT 203 (270)
T ss_dssp TTSSCCHHHHHHHHTCHHHHHTTCSCBEECC
T ss_pred CCcccccccHHHHHhhHHHHhcCCCCEEEEe
Confidence 62 4 4443443 334456788888764
No 261
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=54.12 E-value=1.3e+02 Score=27.84 Aligned_cols=99 Identities=19% Similarity=0.342 Sum_probs=60.3
Q ss_pred eeeecCCCHHHHHHHHHHHhhcCCcEEEEeccC----------------------CchhhHHHHHHHHHhCCCcE--EEE
Q 014285 197 AITIPAVSPAEASELASKYCKLGFSTLKLNVGR----------------------NITADFDVLQAIHAVHPHCS--FIL 252 (427)
Q Consensus 197 ~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~----------------------~~~~d~~~l~~ir~~~~~~~--L~v 252 (427)
|.+.+.-+.+...+.++.+.+.|-..+-+-+-. .+++-++.++.+|+.++++. +|.
T Consensus 25 yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~ 104 (271)
T 3nav_A 25 FVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLM 104 (271)
T ss_dssp EEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 455555566777777888878888887776521 11233567777777655544 455
Q ss_pred eCCC----C--------------------CCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHH
Q 014285 253 DANE----G--------------------YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSN 297 (427)
Q Consensus 253 DAN~----~--------------------~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~ 297 (427)
..|- + ..++|+.++.+.++++++...++=-|... .+.++++++
T Consensus 105 Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~--~eri~~i~~ 171 (271)
T 3nav_A 105 YANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTAS--DETLRAVAQ 171 (271)
T ss_dssp CHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCC--HHHHHHHHH
T ss_pred cCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCC--HHHHHHHHH
Confidence 6661 1 24567777778888888754445555543 345566654
No 262
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=54.00 E-value=1e+02 Score=28.66 Aligned_cols=92 Identities=14% Similarity=0.140 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEec-cC-------CchhhHHHH----HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHh
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNV-GR-------NITADFDVL----QAIHAVHPHCSFILDANEGYTSEEAVEVLGKL 270 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKi-G~-------~~~~d~~~l----~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L 270 (427)
.+++++.+.+++++++|-..|.+-. +. +.+++++++ +++++.. ++.|.||. ++++.+.+-++.
T Consensus 35 ~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT---~~~~va~aAl~a- 109 (282)
T 1aj0_A 35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDT---SKPEVIRESAKV- 109 (282)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEEC---CCHHHHHHHHHT-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeC---CCHHHHHHHHHc-
Confidence 3578888999999999999998886 31 236677665 3444333 88999997 455655555554
Q ss_pred hhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 271 NDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 271 ~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
|.+ .|-.=-.. ..+.+.++++ +.+.|+.+
T Consensus 110 ---Ga~--iINdvsg~-~d~~~~~~~a----~~~~~vVl 138 (282)
T 1aj0_A 110 ---GAH--IINDIRSL-SEPGALEAAA----ETGLPVCL 138 (282)
T ss_dssp ---TCC--EEEETTTT-CSTTHHHHHH----HHTCCEEE
T ss_pred ---CCC--EEEECCCC-CCHHHHHHHH----HhCCeEEE
Confidence 433 45443322 3456777765 56777755
No 263
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=53.84 E-value=1.2e+02 Score=27.08 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=71.2
Q ss_pred HHHHHhhcCCcEEEEeccC--CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE-------e
Q 014285 211 LASKYCKLGFSTLKLNVGR--NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF-------E 281 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~--~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i-------E 281 (427)
+++++++.|-..+=+-... +++.-.+.++.+++. ++.+++|++ +.++|.+..+ .|.. +| +
T Consensus 93 ~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~---t~eea~~a~~----~Gad--~Ig~~~~g~t 161 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCS---TVNEGISCHQ----KGIE--FIGTTLSGYT 161 (229)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECS---SHHHHHHHHH----TTCS--EEECTTTTSS
T ss_pred HHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecC---CHHHHHHHHh----CCCC--EEEecCccCC
Confidence 4556678899988665542 344555677777775 688999986 6777655433 3332 33 1
Q ss_pred ---CCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 282 ---QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 282 ---qP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
.+ ...+++.++++++ . ++||...=-+.+..++.++++.+ ++.+.+=
T Consensus 162 ~~~~~-~~~~~~li~~l~~----~-~ipvIA~GGI~t~~d~~~~~~~G-adgV~VG 210 (229)
T 3q58_A 162 GPITP-VEPDLAMVTQLSH----A-GCRVIAEGRYNTPALAANAIEHG-AWAVTVG 210 (229)
T ss_dssp SSCCC-SSCCHHHHHHHHT----T-TCCEEEESSCCSHHHHHHHHHTT-CSEEEEC
T ss_pred CCCcC-CCCCHHHHHHHHH----c-CCCEEEECCCCCHHHHHHHHHcC-CCEEEEc
Confidence 12 1236777788764 4 89998877888999999999985 6776653
No 264
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=53.68 E-value=1e+02 Score=29.68 Aligned_cols=79 Identities=14% Similarity=0.213 Sum_probs=49.1
Q ss_pred hhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC-----------cc---HHHHHHHHHHHHHcC
Q 014285 290 SGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKLAK-----------FG---VLGTLQIIKATRKSG 354 (427)
Q Consensus 290 ~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~-----------~G---i~~~~~~~~~A~~~g 354 (427)
+.++++++ .+ ++||..+ .+.+.++.+.+.+.+ +|+|.+-..- .| +....++.+.+...+
T Consensus 150 ~~i~~lr~----~~~~~~vi~g-~v~t~e~A~~a~~aG-aD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ 223 (351)
T 2c6q_A 150 EFVKDVRK----RFPQHTIMAG-NVVTGEMVEELILSG-ADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLK 223 (351)
T ss_dssp HHHHHHHH----HCTTSEEEEE-EECSHHHHHHHHHTT-CSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHH----hcCCCeEEEE-eCCCHHHHHHHHHhC-CCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcC
Confidence 34455543 45 6888755 467888998888876 7888553210 01 223456666677779
Q ss_pred CcEEEcccCchhHHHHHHHH
Q 014285 355 LHLMIDGMIETRLATGFALH 374 (427)
Q Consensus 355 i~~~~~s~~es~ig~~a~~h 374 (427)
++++..+-+-++-....++.
T Consensus 224 ipvIa~GGI~~g~di~kAla 243 (351)
T 2c6q_A 224 GHIISDGGCSCPGDVAKAFG 243 (351)
T ss_dssp CEEEEESCCCSHHHHHHHHH
T ss_pred CcEEEeCCCCCHHHHHHHHH
Confidence 99999776666554444443
No 265
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=53.51 E-value=1e+02 Score=29.35 Aligned_cols=119 Identities=13% Similarity=0.194 Sum_probs=70.0
Q ss_pred HHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh--CCC----cEE--------EEeCCCCCC-HHHHHHHHHHhhh---
Q 014285 212 ASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV--HPH----CSF--------ILDANEGYT-SEEAVEVLGKLND--- 272 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~--~~~----~~L--------~vDAN~~~s-~~~A~~~l~~L~~--- 272 (427)
+.+.++.||+.+-+.... ++++.++..+.+-+. .-+ .+| -+|....|| |+||.+|.++..-
T Consensus 91 i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~L 170 (323)
T 2isw_A 91 VKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDAL 170 (323)
T ss_dssp HHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEE
T ss_pred HHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEE
Confidence 445678899999999875 788888888777662 111 111 114444565 9999999987531
Q ss_pred ---CC-CCCceE--eCCCCCCChhhHHHHHHhhccccCCeEEecC-C---------------------CCCHHHHHHHHH
Q 014285 273 ---MG-VIPVLF--EQPVHRDDWSGLHDVSNFARDTYGISVVADE-S---------------------CRSLNDVQKVMQ 324 (427)
Q Consensus 273 ---~~-l~~~~i--EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE-~---------------------~~~~~~~~~ll~ 324 (427)
+| .|=.|= .+|-..-|++-++++.+ .+++|+.+.= | =...+++++.++
T Consensus 171 AvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~----~~~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~ 246 (323)
T 2isw_A 171 AVAIGTSHGAYKFKSESDIRLAIDRVKTISD----LTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIG 246 (323)
T ss_dssp EECSSCCSSSBCCCC----CCCCHHHHHHHH----HHCSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHH
T ss_pred EEecCccccccCCCCCcccccCHHHHHHHHH----HhCCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHH
Confidence 11 111132 33321146788888875 5789998865 4 344566777776
Q ss_pred cCCCcEEEeCC
Q 014285 325 ENLASVVNIKL 335 (427)
Q Consensus 325 ~~a~~~i~lk~ 335 (427)
.+ +.=||++.
T Consensus 247 ~G-V~KiNi~T 256 (323)
T 2isw_A 247 EG-VCKINVDS 256 (323)
T ss_dssp TT-EEEEEECH
T ss_pred CC-CeEEEECh
Confidence 54 33355543
No 266
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=53.49 E-value=1.2e+02 Score=27.04 Aligned_cols=143 Identities=14% Similarity=0.216 Sum_probs=78.0
Q ss_pred cCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcE-E---EEeCCC-CC----CHHHHHHHHHHhh
Q 014285 201 PAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCS-F---ILDANE-GY----TSEEAVEVLGKLN 271 (427)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~-L---~vDAN~-~~----s~~~A~~~l~~L~ 271 (427)
|+.++..|.+.++.+.+.|-.++.+ | ..+.++++|+.. ++. | +-|..+ .+ +.+++.+ +.
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~--~-----~~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~----~~ 98 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAASAGAVAVRI--E-----GIENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDA----LA 98 (229)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEE--E-----SHHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHH----HH
T ss_pred CCCCcchHHHHHHHHHHCCCcEEEE--C-----CHHHHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHH----HH
Confidence 4567889999999999999999876 2 245577778753 222 2 222222 11 3344333 33
Q ss_pred hCCCCCceEeCCC--CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC------Cc-cHHH
Q 014285 272 DMGVIPVLFEQPV--HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA------KF-GVLG 342 (427)
Q Consensus 272 ~~~l~~~~iEqP~--~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~------~~-Gi~~ 342 (427)
+.|.....+--.. .++....+-+.++ +.++++..+ +.+..+.+++.+.+ +|+|..... +. +. .
T Consensus 99 ~aGad~I~l~~~~~~~p~~l~~~i~~~~----~~g~~v~~~--v~t~eea~~a~~~G-ad~Ig~~~~g~t~~~~~~~~-~ 170 (229)
T 3q58_A 99 QAGADIIAFDASFRSRPVDIDSLLTRIR----LHGLLAMAD--CSTVNEGISCHQKG-IEFIGTTLSGYTGPITPVEP-D 170 (229)
T ss_dssp HHTCSEEEEECCSSCCSSCHHHHHHHHH----HTTCEEEEE--CSSHHHHHHHHHTT-CSEEECTTTTSSSSCCCSSC-C
T ss_pred HcCCCEEEECccccCChHHHHHHHHHHH----HCCCEEEEe--cCCHHHHHHHHhCC-CCEEEecCccCCCCCcCCCC-C
Confidence 3343211121111 1245555554443 358888874 67888888888765 889854221 11 21 1
Q ss_pred HHHHHHHHHHcCCcEEEcccCc
Q 014285 343 TLQIIKATRKSGLHLMIDGMIE 364 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~~~s~~e 364 (427)
...+.++++. +++++..+-+.
T Consensus 171 ~~li~~l~~~-~ipvIA~GGI~ 191 (229)
T 3q58_A 171 LAMVTQLSHA-GCRVIAEGRYN 191 (229)
T ss_dssp HHHHHHHHTT-TCCEEEESSCC
T ss_pred HHHHHHHHHc-CCCEEEECCCC
Confidence 1122233334 89998766443
No 267
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=53.46 E-value=1.2e+02 Score=28.79 Aligned_cols=95 Identities=13% Similarity=0.182 Sum_probs=58.7
Q ss_pred HHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh----CC--CcE----------EEEeCC-CCCC-HHHHHHHHHHhhh
Q 014285 212 ASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV----HP--HCS----------FILDAN-EGYT-SEEAVEVLGKLND 272 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~----~~--~~~----------L~vDAN-~~~s-~~~A~~~l~~L~~ 272 (427)
+.+.++.||+.+-+.... ++++.++..+.+-+. += +.+ +.++.+ ..|| |+||.+|.++..-
T Consensus 88 ~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~Tgv 167 (305)
T 1rvg_A 88 VLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGA 167 (305)
T ss_dssp HHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCC
Confidence 344568899999999875 788888887777551 20 111 112223 3464 9999999987531
Q ss_pred ------CC-CCCceE--eCCCCCCChhhHHHHHHhhccccCCeEEecCC
Q 014285 273 ------MG-VIPVLF--EQPVHRDDWSGLHDVSNFARDTYGISVVADES 312 (427)
Q Consensus 273 ------~~-l~~~~i--EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~ 312 (427)
+| .|=.|= .+| .-|++-++++.+ .+++|+.+.=.
T Consensus 168 D~LAvaiGt~HG~Yk~~g~p--~L~~~~L~~I~~----~~~vpLVlHGg 210 (305)
T 1rvg_A 168 DYLAVAIGTSHGAYKGKGRP--FIDHARLERIAR----LVPAPLVLHGA 210 (305)
T ss_dssp SEEEECSSCCSSSBCSSSSC--CCCHHHHHHHHH----HCCSCEEECSC
T ss_pred CEEEEecCccccccCCCCCC--ccCHHHHHHHHH----hcCCCEEEeCC
Confidence 11 110132 233 457888888876 67899988763
No 268
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=53.28 E-value=1.1e+02 Score=30.69 Aligned_cols=118 Identities=9% Similarity=0.075 Sum_probs=72.6
Q ss_pred CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 230 NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 230 ~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
+++.=...+++|++. -++.|.||. ++++-+.+-++..++...-+..+ ..++++.|..++. +.+.||.+
T Consensus 139 dpe~~~~vVk~V~e~-~dvPL~IDS---~dpevleaALea~a~~~plI~sa----t~dn~e~m~~lAa----~y~~pVi~ 206 (446)
T 4djd_C 139 DPAAFKAAVASVAAA-TQLNLVLMA---DDPDVLKEALAGVADRKPLLYAA----TGANYEAMTALAK----ENNCPLAV 206 (446)
T ss_dssp STHHHHHHHHHHHTT-CCSEEEEEC---SCHHHHHHHHGGGGGGCCEEEEE----CTTTHHHHHHHHH----HTTCCEEE
T ss_pred CHHHHHHHHHHHHHh-CCCCEEEec---CCHHHHHHHHHhhcCcCCeeEec----chhhHHHHHHHHH----HcCCcEEE
Confidence 344444455666653 478999995 88888778888886532212233 3678999999986 68888876
Q ss_pred cCCCCCHHHHHHH---HHcCCCcEEEeCCCCcc----HHHHHHHHHHHH-----HcCCcEEEcc
Q 014285 310 DESCRSLNDVQKV---MQENLASVVNIKLAKFG----VLGTLQIIKATR-----KSGLHLMIDG 361 (427)
Q Consensus 310 dE~~~~~~~~~~l---l~~~a~~~i~lk~~~~G----i~~~~~~~~~A~-----~~gi~~~~~s 361 (427)
-=. ..+.++++ +....++=|.+||.--| +....++.+.|- ..|.|+...-
T Consensus 207 ~~~--dl~~lkelv~~a~~~GI~~IvLDPG~~g~~~t~~~~~~iRr~AL~~~d~~LgyPvi~~~ 268 (446)
T 4djd_C 207 YGN--GLEELAELVDKIVALGHKQLVLDPGARETSRAIADFTQIRRLAIKKRFRSFGYPIIALT 268 (446)
T ss_dssp ECS--SHHHHHHHHHHHHHTTCCCEEEECCCCSHHHHHHHHHHHHHHHHHSCCGGGCSCBEEEC
T ss_pred Eec--cHHHHHHHHHHHHHCCCCcEEECCCchhHHHHHHHHHHHHHHhhhccCcccCCCEEecc
Confidence 322 55554333 33344566899998754 334455544433 3677776543
No 269
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=53.28 E-value=69 Score=29.39 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=58.4
Q ss_pred CCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh---------------------hhHHHHHHhhccc-cCCeEEe--
Q 014285 254 ANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW---------------------SGLHDVSNFARDT-YGISVVA-- 309 (427)
Q Consensus 254 AN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~---------------------~~~~~L~~~~r~~-~~iPIa~-- 309 (427)
.++-.+.++..+.++.|++.|.. |||==+|..|. ..+-++.+.+|+. +.+||.+
T Consensus 24 ~~gdp~~~~~~~~~~~l~~~GaD--~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~ 101 (268)
T 1qop_A 24 TLGDPGIEQSLKIIDTLIDAGAD--ALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLM 101 (268)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCS--SEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred eCCCCCHHHHHHHHHHHHHCCCC--EEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 36777778888888888887764 67653332211 1111223333445 6889865
Q ss_pred cCCC---CCHHH-HHHHHHcCCCc-EEEeCCCCccHHHHHHHHHHHHHcCCcEEE
Q 014285 310 DESC---RSLND-VQKVMQENLAS-VVNIKLAKFGVLGTLQIIKATRKSGLHLMI 359 (427)
Q Consensus 310 dE~~---~~~~~-~~~ll~~~a~~-~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~ 359 (427)
..+- ++... ++.+.+.+ +| ++.+|... .+..++++.++++|+...+
T Consensus 102 y~n~v~~~g~~~~~~~~~~aG-adgii~~d~~~---e~~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 102 YANLVFNNGIDAFYARCEQVG-VDSVLVADVPV---EESAPFRQAALRHNIAPIF 152 (268)
T ss_dssp CHHHHHTTCHHHHHHHHHHHT-CCEEEETTCCG---GGCHHHHHHHHHTTCEEEC
T ss_pred cccHHHHhhHHHHHHHHHHcC-CCEEEEcCCCH---HHHHHHHHHHHHcCCcEEE
Confidence 2221 12233 45566666 56 56666543 3456788889999988543
No 270
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=52.60 E-value=1.2e+02 Score=31.22 Aligned_cols=65 Identities=18% Similarity=0.158 Sum_probs=26.1
Q ss_pred HHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCC--CCCCHHHHHHHHHHhhhCCCC
Q 014285 212 ASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDAN--EGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN--~~~s~~~A~~~l~~L~~~~l~ 276 (427)
++...+.|...|-+-... +.+.=.+.++.+++.+..++..+++- ..++++.++++++++.+.+.+
T Consensus 123 ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad 190 (539)
T 1rqb_A 123 VDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGAD 190 (539)
T ss_dssp HHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCC
Confidence 334444454444443332 22222223333444443333333331 223455555555555554443
No 271
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=52.57 E-value=1e+02 Score=27.29 Aligned_cols=93 Identities=15% Similarity=0.088 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh-hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW-SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~-~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
.+++++.+.++++-+.|+. ++|=..+..+. +.++++++. ...+-+-.|- +.+.++++.+++.+ .|++..--
T Consensus 25 ~~~~~~~~~~~al~~gGv~--~iel~~k~~~~~~~i~~l~~~---~~~~~vgagt-vi~~d~~~~A~~aG-Ad~v~~p~- 96 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVR--VLNVTLRTECAVDAIRAIAKE---VPEAIVGAGT-VLNPQQLAEVTEAG-AQFAISPG- 96 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCC--EEEEESCSTTHHHHHHHHHHH---CTTSEEEEES-CCSHHHHHHHHHHT-CSCEEESS-
T ss_pred CCHHHHHHHHHHHHHcCCC--EEEEeCCChhHHHHHHHHHHH---CcCCEEeeCE-EEEHHHHHHHHHcC-CCEEEcCC-
Confidence 3567888999999998986 89988865443 344556652 2246677774 88889999999887 56665321
Q ss_pred CccHHHHHHHHHHHHHcCCcEEEcccC
Q 014285 337 KFGVLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 337 ~~Gi~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
. -.++++.|+.+|++++++...
T Consensus 97 ---~--d~~v~~~~~~~g~~~i~G~~t 118 (214)
T 1wbh_A 97 ---L--TEPLLKAATEGTIPLIPGIST 118 (214)
T ss_dssp ---C--CHHHHHHHHHSSSCEEEEESS
T ss_pred ---C--CHHHHHHHHHhCCCEEEecCC
Confidence 1 257788889999999998643
No 272
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=52.47 E-value=78 Score=35.13 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=73.7
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccC---------------CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHH
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGR---------------NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVL 267 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~---------------~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l 267 (427)
.+++++.+.++.+.+.||..|-+.++- +++.-.+.++++|+.. ++.+.|--.... ++..+++
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~--~~~~~~a 721 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTPNV--TDIVSIA 721 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCS--SCHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCCCh--HHHHHHH
Confidence 478888877877778999999998862 1222345678888753 222222222212 2345566
Q ss_pred HHhhhCCCCCceE----------e-----CCCC-------C------CC----hhhHHHHHHhhcccc-CCeEEecCCCC
Q 014285 268 GKLNDMGVIPVLF----------E-----QPVH-------R------DD----WSGLHDVSNFARDTY-GISVVADESCR 314 (427)
Q Consensus 268 ~~L~~~~l~~~~i----------E-----qP~~-------~------~d----~~~~~~L~~~~r~~~-~iPIa~dE~~~ 314 (427)
+.+.+.++.-..+ + .|.- . .. ++..+++++ .. ++||.+.=-+.
T Consensus 722 ~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~----~~~~ipvi~~GGI~ 797 (1025)
T 1gte_A 722 RAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIAR----ALPGFPILATGGID 797 (1025)
T ss_dssp HHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHH----HSTTCCEEEESSCC
T ss_pred HHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHH----HcCCCCEEEecCcC
Confidence 6666555431112 0 0110 0 01 123444543 45 79999998999
Q ss_pred CHHHHHHHHHcCCCcEEEeC
Q 014285 315 SLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 315 ~~~~~~~ll~~~a~~~i~lk 334 (427)
+..|+.+++..+ ++.+++=
T Consensus 798 s~~da~~~l~~G-a~~v~vg 816 (1025)
T 1gte_A 798 SAESGLQFLHSG-ASVLQVC 816 (1025)
T ss_dssp SHHHHHHHHHTT-CSEEEES
T ss_pred CHHHHHHHHHcC-CCEEEEe
Confidence 999999999865 6777763
No 273
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=52.07 E-value=1.3e+02 Score=28.02 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=62.7
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhC-CCc-EEE-----EeCCCCC-----C---HHHHHHHH
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVH-PHC-SFI-----LDANEGY-----T---SEEAVEVL 267 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~-~~~-~L~-----vDAN~~~-----s---~~~A~~~l 267 (427)
.++++..+.+.++.+.|-..+|+--|. +-.+.+++|++.+ |-+ .|. +-.-++| + .+++++.+
T Consensus 103 ~s~~~a~~~a~rl~kaGa~aVklEdg~---~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA 179 (275)
T 3vav_A 103 GTPADAFASAVKLMRAGAQMVKFEGGE---WLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDA 179 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCG---GGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCch---hHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHH
Confidence 578888888888888899999999874 3467888888865 211 000 0011222 3 46778888
Q ss_pred HHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEE
Q 014285 268 GKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVV 308 (427)
Q Consensus 268 ~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa 308 (427)
+++++.|....++|-+-. +..+++++ .+++|+.
T Consensus 180 ~a~~eAGA~~ivlE~vp~----~~a~~It~----~l~iP~i 212 (275)
T 3vav_A 180 RAVEEAGAQLIVLEAVPT----LVAAEVTR----ELSIPTI 212 (275)
T ss_dssp HHHHHHTCSEEEEESCCH----HHHHHHHH----HCSSCEE
T ss_pred HHHHHcCCCEEEecCCCH----HHHHHHHH----hCCCCEE
Confidence 888888765557777622 35677876 5778875
No 274
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=51.99 E-value=1.1e+02 Score=28.40 Aligned_cols=91 Identities=11% Similarity=0.173 Sum_probs=59.6
Q ss_pred HHHHHhhhCCCCCceEeCCCCC----CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccH
Q 014285 265 EVLGKLNDMGVIPVLFEQPVHR----DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGV 340 (427)
Q Consensus 265 ~~l~~L~~~~l~~~~iEqP~~~----~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi 340 (427)
+.++..++.|.. +|.=-... +..+.++++++ .+++||-...-.++.+++..+...+ +|.|.+=..-...
T Consensus 76 ~~A~~y~~~GA~--~isvltd~~~f~Gs~~~l~~ir~----~v~lPvl~kdfiid~~qv~~A~~~G-AD~VlLi~a~l~~ 148 (272)
T 3qja_A 76 KLAQAYQDGGAR--IVSVVTEQRRFQGSLDDLDAVRA----SVSIPVLRKDFVVQPYQIHEARAHG-ADMLLLIVAALEQ 148 (272)
T ss_dssp HHHHHHHHTTCS--EEEEECCGGGHHHHHHHHHHHHH----HCSSCEEEESCCCSHHHHHHHHHTT-CSEEEEEGGGSCH
T ss_pred HHHHHHHHcCCC--EEEEecChhhcCCCHHHHHHHHH----hCCCCEEECccccCHHHHHHHHHcC-CCEEEEecccCCH
Confidence 355666666643 55433222 23344555543 6889998888888988888888765 6777662222234
Q ss_pred HHHHHHHHHHHHcCCcEEEccc
Q 014285 341 LGTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 341 ~~~~~~~~~A~~~gi~~~~~s~ 362 (427)
....++.+.|++.|+.+++...
T Consensus 149 ~~l~~l~~~a~~lGl~~lvev~ 170 (272)
T 3qja_A 149 SVLVSMLDRTESLGMTALVEVH 170 (272)
T ss_dssp HHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHHCCCcEEEEcC
Confidence 5677888999999999886553
No 275
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=51.79 E-value=39 Score=32.98 Aligned_cols=104 Identities=13% Similarity=0.159 Sum_probs=65.8
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeC--CCC-CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc---CCCcE
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQ--PVH-RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE---NLASV 330 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEq--P~~-~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~---~a~~~ 330 (427)
.++.++-+++++.|.+.|++ +||= |.. ++|++..+++++. ..+..|+.=- -.+..++++.++. -..+.
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~--~IE~g~p~~~~~d~e~v~~i~~~---~~~~~i~~l~-r~~~~di~~a~~al~~ag~~~ 103 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVD--IIEAGFAAASPGDFEAVNAIAKT---ITKSTVCSLS-RAIERDIRQAGEAVAPAPKKR 103 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCS--EEEEEEGGGCHHHHHHHHHHHTT---CSSSEEEEEE-ESSHHHHHHHHHHHTTSSSEE
T ss_pred CcCHHHHHHHHHHHHHcCCC--EEEEeCCCCCHHHHHHHHHHHHh---CCCCeEEEEe-cCCHHHHHHHHHHHhhCCCCE
Confidence 37899999999999999986 8987 442 4567777777642 2334453211 1267788777762 23444
Q ss_pred EEe--CCC-----------Ccc-HHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 331 VNI--KLA-----------KFG-VLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 331 i~l--k~~-----------~~G-i~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
|.+ ..+ .-. +....++++.|+++|..+..++..++-
T Consensus 104 v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r 153 (370)
T 3rmj_A 104 IHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALR 153 (370)
T ss_dssp EEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGG
T ss_pred EEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCc
Confidence 432 111 112 344567889999999999888754443
No 276
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=51.06 E-value=1.3e+02 Score=26.81 Aligned_cols=93 Identities=10% Similarity=0.057 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh-hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW-SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~-~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
.+++++++.++++-+.++. ++|=..+..+. +.++++++. ...+-+-.|- +.+.++++.+++.+ .|++..--
T Consensus 26 ~~~~~~~~~~~al~~gGv~--~iel~~k~~~~~~~i~~l~~~---~~~l~vgaGt-vl~~d~~~~A~~aG-Ad~v~~p~- 97 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLS--VAEITFRSEAAADAIRLLRAN---RPDFLIAAGT-VLTAEQVVLAKSSG-ADFVVTPG- 97 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCC--EEEEETTSTTHHHHHHHHHHH---CTTCEEEEES-CCSHHHHHHHHHHT-CSEEECSS-
T ss_pred CCHHHHHHHHHHHHHcCCC--EEEEeccCchHHHHHHHHHHh---CcCcEEeeCc-EeeHHHHHHHHHCC-CCEEEECC-
Confidence 4678888999999998885 89988865443 345556652 2256666674 55778888888886 67774321
Q ss_pred CccHHHHHHHHHHHHHcCCcEEEcccC
Q 014285 337 KFGVLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 337 ~~Gi~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
. -.++++.|+++|++++++...
T Consensus 98 ---~--d~~v~~~ar~~g~~~i~Gv~t 119 (224)
T 1vhc_A 98 ---L--NPKIVKLCQDLNFPITPGVNN 119 (224)
T ss_dssp ---C--CHHHHHHHHHTTCCEECEECS
T ss_pred ---C--CHHHHHHHHHhCCCEEeccCC
Confidence 1 246677888999999998543
No 277
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=51.05 E-value=87 Score=29.48 Aligned_cols=158 Identities=7% Similarity=-0.028 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH-HHHHHhC---CCcEEE----EeCC---------CCCCHHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVL-QAIHAVH---PHCSFI----LDAN---------EGYTSEEAVEV 266 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l-~~ir~~~---~~~~L~----vDAN---------~~~s~~~A~~~ 266 (427)
+.++..+.++..++.|++.|-.--.-......+.| +++++.+ .++.|. .... ..++++...+-
T Consensus 51 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~ 130 (319)
T 1ur3_M 51 SARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKS 130 (319)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTCEEEEEECEECTTSTTCSSCEECCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeEEEEEeeccCCCCCcccccccCCCCHHHHHHH
Confidence 56677778888899999987654321111223333 4555421 333332 2111 13566655443
Q ss_pred HH-HhhhCC---CCCceEeCCCCCC----ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcC--CCcEEEeCCC
Q 014285 267 LG-KLNDMG---VIPVLFEQPVHRD----DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN--LASVVNIKLA 336 (427)
Q Consensus 267 l~-~L~~~~---l~~~~iEqP~~~~----d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~--a~~~i~lk~~ 336 (427)
++ .|+.++ +.++++-.|-+.. -|+.|.+|.+ .+.==+.|=|.++...++++++.. .++++|+..+
T Consensus 131 ~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~ 205 (319)
T 1ur3_M 131 AEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQ-----SGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEIS 205 (319)
T ss_dssp HHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHH-----TTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECB
T ss_pred HHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHH-----CCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCc
Confidence 32 233322 2234666664432 2445555543 232223444677888888887643 5777787665
Q ss_pred CccHH-HHHHHHHHHHHcCCcEEEcccCchh
Q 014285 337 KFGVL-GTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 337 ~~Gi~-~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
..--. ...+++..|+++||.++..+.+.+|
T Consensus 206 ~~~~~~~~~~ll~~~~~~gi~v~a~spL~~G 236 (319)
T 1ur3_M 206 PVHQPLLLDGTLDQLQQLRVRPMAWSCLGGG 236 (319)
T ss_dssp TTBCGGGTSSHHHHHHHHTCCCEEECCCTTT
T ss_pred hhhCchhhHHHHHHHHHcCCeEEEeccccCc
Confidence 54211 1134788999999999988877554
No 278
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=50.80 E-value=81 Score=28.35 Aligned_cols=93 Identities=12% Similarity=0.151 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe-------cC-CCC--CHHHHHHHHHcCCC
Q 014285 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA-------DE-SCR--SLNDVQKVMQENLA 328 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~-------dE-~~~--~~~~~~~ll~~~a~ 328 (427)
++.+..++++..++.|.. .|+= ...+.++++++ .+++||.. |. -.+ +..++..+++.+ +
T Consensus 34 ~~~~~~~~A~a~~~~Ga~--~i~~----~~~~~i~~ir~----~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G-a 102 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAV--AVRI----EGIDNLRMTRS----LVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG-A 102 (232)
T ss_dssp SHHHHHHHHHHHHHTTCS--EEEE----ESHHHHHHHHT----TCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-C
T ss_pred CcchHHHHHHHHHHCCCe--EEEE----CCHHHHHHHHH----hcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC-C
Confidence 478888899999988863 5653 34666777764 68899752 11 122 345777777765 8
Q ss_pred cEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEccc
Q 014285 329 SVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 329 ~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~ 362 (427)
|++.++.+... .....++++.++++|+.++....
T Consensus 103 d~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (232)
T 3igs_A 103 AIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS 137 (232)
T ss_dssp SEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 89988776432 33456788888899999988654
No 279
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=50.59 E-value=33 Score=32.32 Aligned_cols=56 Identities=11% Similarity=0.145 Sum_probs=47.0
Q ss_pred ccCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCCCCcc----HHHHHHHHHHHHHcCCcEE
Q 014285 302 TYGISVVADE-SCRSLNDVQKVMQENLASVVNIKLAKFG----VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 302 ~~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~~~~G----i~~~~~~~~~A~~~gi~~~ 358 (427)
+.++||++.= ...+.+...+.++.+ ++.+.+|.|..- +..++++.++|++.|+.+-
T Consensus 78 ~~~VPValHlDHg~~~e~i~~ai~~G-FtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVE 138 (288)
T 3q94_A 78 NITVPVAIHLDHGSSFEKCKEAIDAG-FTSVMIDASHHPFEENVETTKKVVEYAHARNVSVE 138 (288)
T ss_dssp TCCSCEEEEEEEECSHHHHHHHHHHT-CSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHcC-CCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 5789999864 445788889999986 899999999873 7779999999999999874
No 280
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=50.00 E-value=25 Score=32.91 Aligned_cols=74 Identities=18% Similarity=0.243 Sum_probs=50.4
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc-cHH-------HHHHHHHHHHHcCCcEEEcccCchhHHHHHHH
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF-GVL-------GTLQIIKATRKSGLHLMIDGMIETRLATGFAL 373 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~-Gi~-------~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~ 373 (427)
..|+.||+|.--.+...+..+.. -.+|+|-+|.+.+ ++. -...++.+|+..|+.++.-+ +|+. .-+
T Consensus 174 ~~G~~ialDDFGtG~ssl~~L~~-l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAEG-VEt~----~q~ 247 (294)
T 2r6o_A 174 ARGVRLALDDFGTGYSSLSYLSQ-LPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAEG-IETA----QQY 247 (294)
T ss_dssp HHTCEEEEEEETSSCBCHHHHHH-SCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEECC-CCSH----HHH
T ss_pred HCCCEEEEECCCCCchhHHHHHh-CCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEec-CCcH----HHH
Confidence 57999999985555555554443 4699999997765 232 14568899999999999877 5764 333
Q ss_pred HHHhhcCC
Q 014285 374 HLAAGLGC 381 (427)
Q Consensus 374 hlaaal~~ 381 (427)
.+...+|+
T Consensus 248 ~~l~~lG~ 255 (294)
T 2r6o_A 248 AFLRDRGC 255 (294)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 44444443
No 281
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=48.81 E-value=1.7e+02 Score=27.27 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=90.8
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHH-HHHHHhC---CCcEEE--EeCC------CCCCHHHHHHHHH-Hh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVL-QAIHAVH---PHCSFI--LDAN------EGYTSEEAVEVLG-KL 270 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l-~~ir~~~---~~~~L~--vDAN------~~~s~~~A~~~l~-~L 270 (427)
+.++..+.++..++.|++.|-.=-.-......+.| +++++.+ .++-|. +-.+ ..++++...+-++ .|
T Consensus 31 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~~~e~SL 110 (327)
T 3eau_A 31 TDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASL 110 (327)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBCCSSGGGBSSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeEEEEEeecCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 56677778888899999987654321111223344 4555532 233332 2111 1345555443332 23
Q ss_pred hhCC---CCCceEeCCCCCC----ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc------CCCcEEEeCCCC
Q 014285 271 NDMG---VIPVLFEQPVHRD----DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE------NLASVVNIKLAK 337 (427)
Q Consensus 271 ~~~~---l~~~~iEqP~~~~----d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~------~a~~~i~lk~~~ 337 (427)
+.++ +.++++-.|-+.. -|+.|.+|.+ .+.==+.|=|-++..++.++++. ..+.++|+.-+.
T Consensus 111 ~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~ 185 (327)
T 3eau_A 111 ERLQLEYVDVVFANRPDPNTPMEETVRAMTHVIN-----QGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHM 185 (327)
T ss_dssp HHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHH-----TTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECBT
T ss_pred HHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHH-----cCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeecccccc
Confidence 3322 2224555554432 2455666653 34444556677888888777653 357888888776
Q ss_pred cc-HHHHHHHHHHHHHcCCcEEEcccCchhH
Q 014285 338 FG-VLGTLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 338 ~G-i~~~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
.- -..-..+..+|+++||.++..+.+.+|+
T Consensus 186 ~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~ 216 (327)
T 3eau_A 186 FQREKVEVQLPELFHKIGVGAMTWSPLACGI 216 (327)
T ss_dssp TBCHHHHHHHHHHHHHHCCEEEEECTTGGGG
T ss_pred cccchhHhhHHHHHHHcCCeEEEeccccCce
Confidence 53 2223367889999999999988876653
No 282
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=48.74 E-value=1.7e+02 Score=28.95 Aligned_cols=98 Identities=9% Similarity=0.189 Sum_probs=63.8
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeCCCCCC---ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPVHRD---DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~---d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
.|+.++-+++++.|.+.|++ .||=-.|.. +++..+.+++. .....|.. =...+..+++++++.+ ++.|.+
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~--~IEvG~P~asp~d~~~~~~i~~~---~~~~~v~~-~~r~~~~di~~A~~aG-~~~V~i 129 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVD--YIELTSPVASEQSRQDCEAICKL---GLKCKILT-HIRCHMDDARVAVETG-VDGVDV 129 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCS--EEEECCTTSCHHHHHHHHHHHTS---CCSSEEEE-EEESCHHHHHHHHHTT-CSEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCC--EEEEeecccCHHHHHHHHHHHhc---CCCCEEEE-eeccChhhHHHHHHcC-CCEEEE
Confidence 47899999999999999986 899865432 34445555531 22334432 1235677888888876 444443
Q ss_pred -------------CCCCcc-HHHHHHHHHHHHHcCCcEEEcc
Q 014285 334 -------------KLAKFG-VLGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 334 -------------k~~~~G-i~~~~~~~~~A~~~gi~~~~~s 361 (427)
+-++-. +..+.+.+++|+++|+.+..+.
T Consensus 130 ~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~ 171 (423)
T 3ivs_A 130 VIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSS 171 (423)
T ss_dssp EEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 111222 4567789999999999998765
No 283
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=48.43 E-value=44 Score=31.83 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHcCCcEEEccc---CchhHHHHHHHHHHhhcC
Q 014285 340 VLGTLQIIKATRKSGLHLMIDGM---IETRLATGFALHLAAGLG 380 (427)
Q Consensus 340 i~~~~~~~~~A~~~gi~~~~~s~---~es~ig~~a~~hlaaal~ 380 (427)
....++.++.|++.|+++..+-+ .|+.--....+.+...++
T Consensus 187 ~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~l~~l~ 230 (350)
T 3t7v_A 187 FDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTND 230 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHHHHhCC
Confidence 77888999999999998755332 344434444455554443
No 284
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=47.33 E-value=1.9e+02 Score=27.38 Aligned_cols=144 Identities=13% Similarity=0.098 Sum_probs=79.3
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEec-----cCC-------chhhHHHH----HHHHHhCCCcEEEEeCCCCCCHHHHHHH
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNV-----GRN-------ITADFDVL----QAIHAVHPHCSFILDANEGYTSEEAVEV 266 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKi-----G~~-------~~~d~~~l----~~ir~~~~~~~L~vDAN~~~s~~~A~~~ 266 (427)
.+++.+.+.+++++++|-..|-+-. |.. .+++++|+ +++++. .++.|.||. |.++.|.+-
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~-~~vpISIDT---~~~~Va~aA 121 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKR-FPQLISVDT---SRPRVMREA 121 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHH-CCSEEEEEC---SCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhh-CCCeEEEeC---CCHHHHHHH
Confidence 4678889999999999999887764 111 24555554 444443 479999996 455555555
Q ss_pred HHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCC----------------HHHH----HHHHHcC
Q 014285 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRS----------------LNDV----QKVMQEN 326 (427)
Q Consensus 267 l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~----------------~~~~----~~ll~~~ 326 (427)
++. |.. +|=+ +...+.++|..+++ +.+.|+.+==.--. ...+ +.+.+.+
T Consensus 122 l~a----Ga~--iIND-Vsg~~~~~m~~v~a----~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~G 190 (314)
T 3tr9_A 122 VNT----GAD--MIND-QRALQLDDALTTVS----ALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAG 190 (314)
T ss_dssp HHH----TCC--EEEE-TTTTCSTTHHHHHH----HHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHc----CCC--EEEE-CCCCCchHHHHHHH----HhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcC
Confidence 543 221 2222 11222346777765 46777765211100 1112 3344443
Q ss_pred CC-cEEEeCCCC----cc--HHHHH---HHHHHHHHcCCcEEEcc
Q 014285 327 LA-SVVNIKLAK----FG--VLGTL---QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 327 a~-~~i~lk~~~----~G--i~~~~---~~~~~A~~~gi~~~~~s 361 (427)
-. +-|++||.. +| ....+ +-++.-+..|.++.++-
T Consensus 191 I~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l~~l~~lg~PvL~G~ 235 (314)
T 3tr9_A 191 ISEDRIIIDPGFGQGNYGKNVSENFYLLNKLPEFVAMGLPVLSGW 235 (314)
T ss_dssp CCGGGEEEECCCCSGGGCCCHHHHHHHHHTTHHHHTTSSCBEECC
T ss_pred CCHhHEEEeCCCCchhhcCCHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 22 347899964 12 33222 23333456799998865
No 285
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=46.70 E-value=60 Score=28.10 Aligned_cols=93 Identities=17% Similarity=0.116 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHhhhCCCCCceEeCCCC---CCChhhHHHHHHhhcccc-CCeEEecCCCCC-HHH-HHHHHHcCCCcEE
Q 014285 258 YTSEEAVEVLGKLNDMGVIPVLFEQPVH---RDDWSGLHDVSNFARDTY-GISVVADESCRS-LND-VQKVMQENLASVV 331 (427)
Q Consensus 258 ~s~~~A~~~l~~L~~~~l~~~~iEqP~~---~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~-~~~-~~~ll~~~a~~~i 331 (427)
.+.+++++.++++.+ ++. |||=-.+ .+-.+..++|++ .+ +.||-+|=.+.+ .+. ++.+.+. .+|++
T Consensus 10 ~~~~~~~~~~~~~~~-~v~--~iev~~~~~~~~g~~~i~~l~~----~~~~~~i~~~l~~~di~~~~~~~a~~~-Gad~v 81 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVD--IIELGTPLIKAEGLSVITAVKK----AHPDKIVFADMKTMDAGELEADIAFKA-GADLV 81 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCS--EEEECHHHHHHHCTHHHHHHHH----HSTTSEEEEEEEECSCHHHHHHHHHHT-TCSEE
T ss_pred CCHHHHHHHHHHhhc-cCC--EEEECcHHHHhhCHHHHHHHHH----hCCCCeEEEEEEecCccHHHHHHHHhC-CCCEE
Confidence 478999999999988 553 7876443 122344555653 44 789887766666 566 4455554 58998
Q ss_pred EeCCCCccHHHHHHHHHHHHHcCCcEEE
Q 014285 332 NIKLAKFGVLGTLQIIKATRKSGLHLMI 359 (427)
Q Consensus 332 ~lk~~~~Gi~~~~~~~~~A~~~gi~~~~ 359 (427)
.+.+... -....++.+.++++|+.+.+
T Consensus 82 ~vh~~~~-~~~~~~~~~~~~~~g~~~gv 108 (207)
T 3ajx_A 82 TVLGSAD-DSTIAGAVKAAQAHNKGVVV 108 (207)
T ss_dssp EEETTSC-HHHHHHHHHHHHHHTCEEEE
T ss_pred EEeccCC-hHHHHHHHHHHHHcCCceEE
Confidence 8766442 22344666778888888644
No 286
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=46.51 E-value=2.2e+02 Score=28.52 Aligned_cols=68 Identities=16% Similarity=0.123 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec----cC--CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV----GR--NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi----G~--~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
+.+.+.+.++..++.|... ..-+ |. +++.=++.++++.+.|.+.--..|.+|..+|.++.++++.+.+
T Consensus 125 d~~ni~~~i~~ak~~G~~v-~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~ 198 (464)
T 2nx9_A 125 DVRNMQQALQAVKKMGAHA-QGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKK 198 (464)
T ss_dssp CTHHHHHHHHHHHHTTCEE-EEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEE-EEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHH
Confidence 4455555566666667542 1222 21 3333345556666666665556777777777777777777654
No 287
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=46.41 E-value=1.6e+02 Score=26.30 Aligned_cols=106 Identities=15% Similarity=0.207 Sum_probs=71.1
Q ss_pred HHHHHhhcCCcEEEEeccC--CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE-------e
Q 014285 211 LASKYCKLGFSTLKLNVGR--NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF-------E 281 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~--~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i-------E 281 (427)
+++++++.|-..+=+-... +++.-.+.++.+++. ++.+++|++ +.++|.+.. +.+.. +| +
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~---t~eea~~a~----~~Gad--~Ig~~~~g~t 161 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCS---SVDDGLACQ----RLGAD--IIGTTMSGYT 161 (232)
T ss_dssp HHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECC---SHHHHHHHH----HTTCS--EEECTTTTSS
T ss_pred HHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCC---CHHHHHHHH----hCCCC--EEEEcCccCC
Confidence 4556678899888665542 344555667777765 688899886 567765443 33332 33 1
Q ss_pred ---CCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 282 ---QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 282 ---qP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
.+ ...+++.++++++ . ++||...=-+.+..++.++++.+ ++.+.+=
T Consensus 162 ~~~~~-~~~~~~~i~~l~~----~-~ipvIA~GGI~t~~d~~~~~~~G-adgV~VG 210 (232)
T 3igs_A 162 TPDTP-EEPDLPLVKALHD----A-GCRVIAEGRYNSPALAAEAIRYG-AWAVTVG 210 (232)
T ss_dssp SSSCC-SSCCHHHHHHHHH----T-TCCEEEESCCCSHHHHHHHHHTT-CSEEEEC
T ss_pred CCCCC-CCCCHHHHHHHHh----c-CCcEEEECCCCCHHHHHHHHHcC-CCEEEEe
Confidence 12 2336788888874 4 89998877888999999999985 6776663
No 288
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=46.40 E-value=50 Score=32.54 Aligned_cols=59 Identities=14% Similarity=0.098 Sum_probs=41.9
Q ss_pred ccCCeEEecCCCCCHHHHH--HHHHcCCCcEEEeCCCCcc-H----HHHHHHHHHHHHcCCcEEEcc
Q 014285 302 TYGISVVADESCRSLNDVQ--KVMQENLASVVNIKLAKFG-V----LGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~--~ll~~~a~~~i~lk~~~~G-i----~~~~~~~~~A~~~gi~~~~~s 361 (427)
.+++|+.+|=+....--++ ...+ ..+|-+.+.|..+| - ....++++.|+++|+++-++-
T Consensus 79 ~~~vPLVADiHF~~~~al~a~~~~a-~~~dkiRINPGNig~~~k~~e~~~~vv~~ak~~~~pIRIGV 144 (406)
T 4g9p_A 79 GVEVPLVGDFHFNGHLLLRKYPKMA-EALDKFRINPGTLGRGRHKDEHFAEMIRIAMDLGKPVRIGA 144 (406)
T ss_dssp TCCCCEEEECCSSHHHHHHHCHHHH-HHCSEEEECTTSSCSTHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCceEeeecccHHHHHHHHHHHH-hHHhhcccCccccCccccHHHHHHHHHHHHHHccCCceecc
Confidence 4789999996654322222 1122 25789999999998 3 246789999999999998764
No 289
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=46.38 E-value=2.2e+02 Score=27.86 Aligned_cols=127 Identities=22% Similarity=0.281 Sum_probs=78.4
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
+.+...++..+ .+.++.+++.|-..|-+.... ..+.-.+.++.+++.+ ++.+.+ ...-++++|....+.
T Consensus 135 l~v~~~v~~~~----~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~--g~V~t~e~A~~a~~a--- 204 (400)
T 3ffs_A 135 LRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIV--GNVVTEEATKELIEN--- 204 (400)
T ss_dssp BCCEEEECCC-----CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEE--EEECSHHHHHHHHHT---
T ss_pred eeEEeecCCCH----HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEE--eecCCHHHHHHHHHc---
Confidence 44455555543 456777888999988775543 2344577888888876 566665 122567877665553
Q ss_pred CCCCCceE--eCC-----------CCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 273 MGVIPVLF--EQP-----------VHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 273 ~~l~~~~i--EqP-----------~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
+....-+ | | ....++..+.++++.+ +..++||..+=-+.+..++.+++..+ ++.+++-
T Consensus 205 -GAD~I~vG~g-~Gs~~~tr~~~g~g~p~~~al~~v~~~~-~~~~IPVIA~GGI~~~~di~kalalG-Ad~V~vG 275 (400)
T 3ffs_A 205 -GADGIKVGIG-PGSICTTRIVAGVGVPQITAIEKCSSVA-SKFGIPIIADGGIRYSGDIGKALAVG-ASSVMIG 275 (400)
T ss_dssp -TCSEEEECC----------CCSCBCCCHHHHHHHHHHHH-TTTTCCEEEESCCCSHHHHHHHHTTT-CSEEEEC
T ss_pred -CCCEEEEeCC-CCcCcccccccccchhHHHHHHHHHHHH-HhcCCCEEecCCCCCHHHHHHHHHcC-CCEEEEC
Confidence 2210111 1 1 0112455566665432 24689999998999999999999886 5677643
No 290
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=46.15 E-value=57 Score=29.31 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=34.3
Q ss_pred CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 287 DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 287 ~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
.+++.++++++ ..++||..+=-+.+..+++++++.+ +|.+.+-
T Consensus 66 ~~~~~i~~i~~----~~~ipvi~~Ggi~~~~~~~~~l~~G-ad~V~ig 108 (247)
T 3tdn_A 66 YDTEMIRFVRP----LTTLPIIASGGAGKMEHFLEAFLRG-ADKVSIN 108 (247)
T ss_dssp CCHHHHHHHGG----GCCSCEEEESCCCSHHHHHHHHHTT-CSEECCS
T ss_pred ccHHHHHHHHH----hCCCCEEEeCCCCCHHHHHHHHHcC-CCeeehh
Confidence 35677777775 6799999998999999999999876 7776653
No 291
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=45.89 E-value=6.5 Score=37.92 Aligned_cols=35 Identities=9% Similarity=-0.007 Sum_probs=31.0
Q ss_pred eeccccccceeeeccccccccccccCCcceeeEEE
Q 014285 35 CVSNVMAETTTVRTSERTSLGFKNLTETFWVDVQR 69 (427)
Q Consensus 35 ~~~~~~~~~~~f~~~~~ts~g~~~~~~~~~~~I~~ 69 (427)
|+.++.++.+.||+|-.||+|.++.++.++++|++
T Consensus 1 m~i~~~~~~lpl~~p~~~s~g~~~~~~~~~V~vtd 35 (338)
T 3ijl_A 1 MKMTFFPYELKLRHVFTVATYSRTTTPDVQVEIEY 35 (338)
T ss_dssp -CEEEEECCEEEEEEEEETTEEEEEECEEEEEEEE
T ss_pred CeEEEEEEEEeccCcEEeeCcEEEEeeEEEEEEEe
Confidence 56788999999999999999999999999999864
No 292
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=45.76 E-value=1.5e+02 Score=28.03 Aligned_cols=96 Identities=14% Similarity=0.228 Sum_probs=56.7
Q ss_pred HHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh----CC--CcEE----------EEeC-CCCC-CHHHHHHHHHHhhh
Q 014285 212 ASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV----HP--HCSF----------ILDA-NEGY-TSEEAVEVLGKLND 272 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~----~~--~~~L----------~vDA-N~~~-s~~~A~~~l~~L~~ 272 (427)
+.+.++.||+.+-+.... ++++.++..+.+-+. += +.+| ..+. ...| +|+||.+|.++..-
T Consensus 90 ~~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~Tgv 169 (307)
T 3n9r_A 90 CEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQV 169 (307)
T ss_dssp HHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCC
T ss_pred HHHHHHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCC
Confidence 344568899999999875 788888887777552 21 1122 1122 2345 49999999986431
Q ss_pred ------CC-CCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecC
Q 014285 273 ------MG-VIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADE 311 (427)
Q Consensus 273 ------~~-l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE 311 (427)
.| .|=.|=.-.-+.-|++-++++.+ ..++|+.+.=
T Consensus 170 D~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~----~~~~PLVlHG 211 (307)
T 3n9r_A 170 DYLAPAIGTSHGAFKFKGEPKLDFERLQEVKR----LTNIPLVLHG 211 (307)
T ss_dssp SEEEECSSCCSSSBCCSSSCCCCHHHHHHHHH----HHCSCEEESS
T ss_pred CEEEEecCCcccccCCCCCCccCHHHHHHHHh----cCCCCeEEeC
Confidence 11 11013211113457888888854 4679998865
No 293
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=45.75 E-value=1.5e+02 Score=26.27 Aligned_cols=113 Identities=12% Similarity=0.145 Sum_probs=67.5
Q ss_pred HHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEe-CC----
Q 014285 209 SELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE-QP---- 283 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iE-qP---- 283 (427)
.+.++.+.+.|...+-+-. ...++-.+.++.+++.+.++-+.++.+ ++.++++.+....+ ++ .++- =|
T Consensus 98 ~~~~~~~~~~Gad~v~~~~-~~~~~~~~~~~~~~~~g~~~~~~i~~~---t~~e~~~~~~~~~d-~~--i~~~~~~G~~g 170 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVD-LPVFHAKEFTEIAREEGIKTVFLAAPN---TPDERLKVIDDMTT-GF--VYLVSLYGTTG 170 (248)
T ss_dssp HHHHHHHHHHTCCEEEETT-CCGGGHHHHHHHHHHHTCEEEEEECTT---CCHHHHHHHHHHCS-SE--EEEECCC----
T ss_pred HHHHHHHHHCCCCEEEECC-CChhhHHHHHHHHHHhCCCeEEEECCC---CHHHHHHHHHhcCC-Ce--EEEEECCccCC
Confidence 3556677788988877732 223333345566777777777777654 45555554443332 11 1221 11
Q ss_pred ----CCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 284 ----VHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 284 ----~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
+.+..++.++++++ .+++||..+=-+.+.+++.++++.+ ++.+++
T Consensus 171 ~~~~~~~~~~~~i~~l~~----~~~~pi~~~GGI~~~e~i~~~~~~G-ad~viv 219 (248)
T 1geq_A 171 AREEIPKTAYDLLRRAKR----ICRNKVAVGFGVSKREHVVSLLKEG-ANGVVV 219 (248)
T ss_dssp ---CCCHHHHHHHHHHHH----HCSSCEEEESCCCSHHHHHHHHHTT-CSEEEE
T ss_pred CCCCCChhHHHHHHHHHh----hcCCCEEEEeecCCHHHHHHHHHcC-CCEEEE
Confidence 11222345566654 4689999998888889999998876 666664
No 294
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=45.39 E-value=2e+02 Score=26.96 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|-+.+=+-- |- +.++=.+.++.+.+ ..+.+.+.+=+ ++-+.++++++.+..++.|..
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~~~t~~ai~la~~A~~~Gad 105 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT-SHYSTQVCAARSLRAQQLGAA 105 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec-CCchHHHHHHHHHHHHHcCCC
Confidence 567788889999999988776643 21 33444556777777 45667777766 567889999999999988764
Q ss_pred CceEeCCC-----CCCC---hhhHHHHHHhhccccCCeEEecCC-----CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHH
Q 014285 277 PVLFEQPV-----HRDD---WSGLHDVSNFARDTYGISVVADES-----CRSLNDVQKVMQENLASVVNIKLAKFG-VLG 342 (427)
Q Consensus 277 ~~~iEqP~-----~~~d---~~~~~~L~~~~r~~~~iPIa~dE~-----~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~ 342 (427)
-..+=-|. ++.+ ++-++++++ .+++||.+=.. -.+.+.+.++.+. .++++-+|..-.| +..
T Consensus 106 avlv~~Pyy~~~~~~s~~~l~~~f~~va~----a~~lPiilYn~P~tg~~l~~~~~~~La~~-~pnIvgiK~~~~~~~~~ 180 (309)
T 3fkr_A 106 MVMAMPPYHGATFRVPEAQIFEFYARVSD----AIAIPIMVQDAPASGTALSAPFLARMARE-IEQVAYFXIETPGAANK 180 (309)
T ss_dssp EEEECCSCBTTTBCCCHHHHHHHHHHHHH----HCSSCEEEEECGGGCCCCCHHHHHHHHHH-STTEEEEEECSSSHHHH
T ss_pred EEEEcCCCCccCCCCCHHHHHHHHHHHHH----hcCCCEEEEeCCCCCCCCCHHHHHHHHhh-CCCEEEEECCCcchHHH
Confidence 22344454 2222 223445554 57899987431 2455666777743 3778889944446 666
Q ss_pred HHHHHHHHH
Q 014285 343 TLQIIKATR 351 (427)
Q Consensus 343 ~~~~~~~A~ 351 (427)
..++++...
T Consensus 181 ~~~~~~~~~ 189 (309)
T 3fkr_A 181 LRELIRLGG 189 (309)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHhcC
Confidence 666665543
No 295
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=45.39 E-value=90 Score=29.43 Aligned_cols=150 Identities=12% Similarity=0.125 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccC---CchhhHHHHH-HHHHh--CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC-
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGR---NITADFDVLQ-AIHAV--HPHCSFILDANEGYTSEEAVEVLGKLNDMGV- 275 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~---~~~~d~~~l~-~ir~~--~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l- 275 (427)
.+++...+.+++++++|-..+-+-.|. +.+++++++- .|+.. ..++.|+||. +.++-+..-++.....++
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT---~~~~V~eaaL~~~~Ga~iI 110 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDS---SKWEVIEAGLKCLQGKSIV 110 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEEC---SCHHHHHHHHHHCSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeC---CCHHHHHHHHHhcCCCCEE
Confidence 467888999999999999999998875 3445565543 33321 2478999997 556665555554433221
Q ss_pred CCceEeCCCCCCChhhHHHHHHhhccccCCeEEe---cCC--CCCHHH-------HHHHH-HcCCC--cEEEeCCCCc--
Q 014285 276 IPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA---DES--CRSLND-------VQKVM-QENLA--SVVNIKLAKF-- 338 (427)
Q Consensus 276 ~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~---dE~--~~~~~~-------~~~ll-~~~a~--~~i~lk~~~~-- 338 (427)
.+.|.|+- .++++.+..+++ +.+.|+.+ ||. -.+.++ +.+++ ....+ +=|++||...
T Consensus 111 NdIs~~~~--d~~~~~~~~l~a----~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~ 184 (300)
T 3k13_A 111 NSISLKEG--EEVFLEHARIIK----QYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAV 184 (300)
T ss_dssp EEECSTTC--HHHHHHHHHHHH----HHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCC
T ss_pred EeCCcccC--ChhHHHHHHHHH----HhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCcc
Confidence 11122210 113446777775 56667643 331 122222 12221 22223 4488999873
Q ss_pred c--HHH-------HHHHHHHHH-Hc-CCcEEEcc
Q 014285 339 G--VLG-------TLQIIKATR-KS-GLHLMIDG 361 (427)
Q Consensus 339 G--i~~-------~~~~~~~A~-~~-gi~~~~~s 361 (427)
| ... .++-++..+ .+ |.++.++-
T Consensus 185 gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~ 218 (300)
T 3k13_A 185 ATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGV 218 (300)
T ss_dssp SSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBG
T ss_pred CCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3 233 455555555 67 99998764
No 296
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=44.91 E-value=65 Score=28.76 Aligned_cols=34 Identities=3% Similarity=-0.006 Sum_probs=23.0
Q ss_pred CCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEcccC
Q 014285 327 LASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 327 a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
.+.++++-+ |.....+++++|+++|+.+.++...
T Consensus 104 Ga~~v~~~~---~~~~~~~l~~~a~~~gv~l~~En~~ 137 (262)
T 3p6l_A 104 DLEFITCEP---ALSDWDLVEKLSKQYNIKISVHNHP 137 (262)
T ss_dssp TCSEEEECC---CGGGHHHHHHHHHHHTCEEEEECCS
T ss_pred CCCEEEecC---CHHHHHHHHHHHHHhCCEEEEEeCC
Confidence 345555544 2233467888999999999888754
No 297
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=44.36 E-value=1.6e+02 Score=26.97 Aligned_cols=105 Identities=16% Similarity=0.201 Sum_probs=50.8
Q ss_pred cEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCC---------ChhhHHHHHHhhccccCCeEEecCCCCCHHH
Q 014285 248 CSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRD---------DWSGLHDVSNFARDTYGISVVADESCRSLND 318 (427)
Q Consensus 248 ~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~---------d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~ 318 (427)
.-+....|..=+.+.|+++++++++.+..+ .-=|-+++. ..++++.|.+.. ++.++|++. +..+..+
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~-vk~~~fkprts~~~~~g~~~egl~~l~~~~-~~~Gl~~~t--e~~d~~~ 99 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKV-LRGGAFKPRTSPYSFQGYGEKALRWMREAA-DEYGLVTVT--EVMDTRH 99 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCE-EECBSSCCCSSTTSCCCCTHHHHHHHHHHH-HHHTCEEEE--ECCCGGG
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCE-EEEEecccCCCcccccCccHHHHHHHHHHH-HHcCCcEEE--eeCCHHh
Confidence 345555555556666777776666655431 111111100 044455444332 357777776 3444455
Q ss_pred HHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEcc
Q 014285 319 VQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 319 ~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s 361 (427)
+..+.+. ++++++-...+- . ..+.+.+.+.|+++.+..
T Consensus 100 ~~~l~~~--vd~~kIga~~~~--n-~~ll~~~a~~~kPV~lk~ 137 (262)
T 1zco_A 100 VELVAKY--SDILQIGARNSQ--N-FELLKEVGKVENPVLLKR 137 (262)
T ss_dssp HHHHHHH--CSEEEECGGGTT--C-HHHHHHHTTSSSCEEEEC
T ss_pred HHHHHhh--CCEEEECccccc--C-HHHHHHHHhcCCcEEEec
Confidence 4444433 566666543332 1 112222223677777654
No 298
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=44.14 E-value=43 Score=31.85 Aligned_cols=55 Identities=15% Similarity=0.195 Sum_probs=46.6
Q ss_pred cCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCCCCcc----HHHHHHHHHHHHHcCCcEE
Q 014285 303 YGISVVADE-SCRSLNDVQKVMQENLASVVNIKLAKFG----VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 303 ~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~~~~G----i~~~~~~~~~A~~~gi~~~ 358 (427)
.++||++.= ...+.+...+.++.+ ++.+.+|.|..- +..++++.++|++.|+.+-
T Consensus 73 ~~VPValHLDHg~~~e~~~~ai~~G-FtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVE 132 (307)
T 3n9r_A 73 PHIPVALHLDHGTTFESCEKAVKAG-FTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVE 132 (307)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHHT-CSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEECCCCCCHHHHHHHHHhC-CCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 679999863 445778889999986 999999999873 7789999999999999985
No 299
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=43.96 E-value=6.7 Score=38.66 Aligned_cols=51 Identities=10% Similarity=0.155 Sum_probs=30.9
Q ss_pred cccccccccccccccccccchhhheeccccccceeeeccccccccccccCCcceeeEE
Q 014285 11 PTCNFFFSPCVSRSLHRSQNVIKFCVSNVMAETTTVRTSERTSLGFKNLTETFWVDVQ 68 (427)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ts~g~~~~~~~~~~~I~ 68 (427)
-|-||+|-.|.+.. ||+-..++.+..+-|++|-.||+|..+.++.++++|+
T Consensus 14 ~~~~~~~~~~m~~~-------mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~ 64 (390)
T 3ugv_A 14 GTENLYFQSMMAQT-------LTFRKLTARPVLLKLQRPVTARIATIPDWPLILIDIE 64 (390)
T ss_dssp -------------C-------CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred CccccccccccCCC-------CEEEEEEEEEEEecCCCCccCcccccccceEEEEEEE
Confidence 46789887776532 6666677888899999999999998887777777764
No 300
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=42.99 E-value=2.1e+02 Score=26.61 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|-..+=+-- |- +.++=.+.++.+.+ ....+.+.+ .-++-+.+++++..+..++.|..
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gad 101 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA-GVASTSVADAVAQAKLYEKLGAD 101 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE-EEEESSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHHcCCC
Confidence 567778888888899987763321 21 33444556677776 455666666 33556789999999998886654
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccCCeEEecCC------CCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYGISVVADES------CRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~iPIa~dE~------~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|.- +.+ .+-++++++ .+++||.+=.. -.+.+.+.++. ..++++-+|-+- | +....
T Consensus 102 avlv~~P~y~~~~~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La--~~pnIvgiKdss-gd~~~~~ 174 (300)
T 3eb2_A 102 GILAILEAYFPLKDAQIESYFRAIAD----AVEIPVVIYTNPQFQRSDLTLDVIARLA--EHPRIRYIKDAS-TNTGRLL 174 (300)
T ss_dssp EEEEEECCSSCCCHHHHHHHHHHHHH----HCSSCEEEEECTTTCSSCCCHHHHHHHH--TSTTEEEEEECS-SBHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHH----HCCCCEEEEECccccCCCCCHHHHHHHH--cCCCEEEEEcCC-CCHHHHH
Confidence 223434431 222 223445554 57899987541 24555667774 357889999874 6 77776
Q ss_pred HHHHHHHHcCCcEEEcc
Q 014285 345 QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~s 361 (427)
++++... .++.+..+.
T Consensus 175 ~~~~~~~-~~f~v~~G~ 190 (300)
T 3eb2_A 175 SIINRCG-DALQVFSAS 190 (300)
T ss_dssp HHHHHHG-GGSEEEECT
T ss_pred HHHHHcC-CCeEEEeCc
Confidence 6665442 356665543
No 301
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=42.65 E-value=1.9e+02 Score=28.02 Aligned_cols=98 Identities=12% Similarity=0.241 Sum_probs=62.8
Q ss_pred CCCHHHHHHHHHHhhhCCCCCceEeCCCCC---CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 257 GYTSEEAVEVLGKLNDMGVIPVLFEQPVHR---DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 257 ~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~---~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
.++.++-+++++.|.+.|+. +||=-.+. .+.+..+.+++ .....++..- .-....+++++++.+ ++.+.+
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~--~IE~g~p~~~~~~~~~~~~i~~---~~~~~~v~~~-~r~~~~di~~a~~~g-~~~v~i 93 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIE--YIEVTTPVASPQSRKDAEVLAS---LGLKAKVVTH-IQCRLDAAKVAVETG-VQGIDL 93 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCS--EEEECCTTSCHHHHHHHHHHHT---SCCSSEEEEE-EESCHHHHHHHHHTT-CSEEEE
T ss_pred CcCHHHHHHHHHHHHHcCcC--EEEEcCCcCCHHHHHHHHHHHh---cCCCcEEEEE-cccChhhHHHHHHcC-CCEEEE
Confidence 57899999999999999985 99985543 23334444443 1233455431 112467788888875 555553
Q ss_pred --CCCC-----cc------HHHHHHHHHHHHHcC--CcEEEcc
Q 014285 334 --KLAK-----FG------VLGTLQIIKATRKSG--LHLMIDG 361 (427)
Q Consensus 334 --k~~~-----~G------i~~~~~~~~~A~~~g--i~~~~~s 361 (427)
..+. .| +..+.+.++.|+++| +.+.++.
T Consensus 94 ~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ 136 (382)
T 2ztj_A 94 LFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA 136 (382)
T ss_dssp EECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred EeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE
Confidence 1111 22 455788999999999 8887764
No 302
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=42.51 E-value=60 Score=30.77 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=46.0
Q ss_pred cCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCCCCcc----HHHHHHHHHHHHHcCCcEE
Q 014285 303 YGISVVADE-SCRSLNDVQKVMQENLASVVNIKLAKFG----VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 303 ~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~~~~G----i~~~~~~~~~A~~~gi~~~ 358 (427)
.++||++.= ...+.+..++.++.+ ++.+.+|.|..= +..++++.++|+++|+.+-
T Consensus 71 ~~VPValHlDHg~~~e~~~~ai~~G-FtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVE 130 (305)
T 1rvg_A 71 ARVPVAVHLDHGSSYESVLRALRAG-FTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVE 130 (305)
T ss_dssp CSSCEEEEEEEECSHHHHHHHHHTT-CSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcC-CCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 678998864 445778889999875 899999999873 7779999999999999884
No 303
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=42.49 E-value=2.2e+02 Score=26.69 Aligned_cols=147 Identities=18% Similarity=0.187 Sum_probs=93.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|...+=+-- |- +.++=.+.++.+.+ +...+.+.+=+.. +.+++++..+..++.|..
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~la~~A~~~Gad 108 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIELGKSAIDSGAD 108 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHHHHHHHHHcCCC
Confidence 667788889999999988754432 21 33444556777777 4567888886654 999999999999987754
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccCCeEEecCCC---CCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYGISVVADESC---RSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQII 347 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~iPIa~dE~~---~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~ 347 (427)
-..+=-|.- +.+ ++-++++++ .+++||.+=. . .+.+.+.++.+ .++++-+|-+- | +....+++
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn-~tg~l~~~~~~~La~--~pnIvgiKdss-gd~~~~~~~~ 180 (314)
T 3d0c_A 109 CVMIHQPVHPYITDAGAVEYYRNIIE----ALDAPSIIYF-KDAHLSDDVIKELAP--LDKLVGIKYAI-NDIQRVTQVM 180 (314)
T ss_dssp EEEECCCCCSCCCHHHHHHHHHHHHH----HSSSCEEEEE-CCTTSCTHHHHHHTT--CTTEEEEEECC-CCHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEe-CCCCcCHHHHHHHHc--CCCEEEEEeCC-CCHHHHHHHH
Confidence 223334431 222 223445554 6789998744 2 35556677763 47888898765 5 76666665
Q ss_pred HHHHHc-CCcEEEc
Q 014285 348 KATRKS-GLHLMID 360 (427)
Q Consensus 348 ~~A~~~-gi~~~~~ 360 (427)
+..... ++.+..+
T Consensus 181 ~~~~~~~~f~v~~G 194 (314)
T 3d0c_A 181 RAVPKSSNVAFICG 194 (314)
T ss_dssp HHSCGGGCCEEEET
T ss_pred HhcCCCCCEEEEEe
Confidence 443211 5566544
No 304
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=41.92 E-value=2e+02 Score=27.06 Aligned_cols=57 Identities=12% Similarity=0.162 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchh------hHHHHHHHHHhCCCcEEEEeCCCCCCHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITA------DFDVLQAIHAVHPHCSFILDANEGYTSEE 262 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~------d~~~l~~ir~~~~~~~L~vDAN~~~s~~~ 262 (427)
+++++.+.+++..+.|++.|-+--|.++.. =.+.++.+++.+ ++.+.+.. +..+.+.
T Consensus 92 s~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~-~i~i~~s~-g~~~~e~ 154 (350)
T 3t7v_A 92 TMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEEL-GLPIMISP-GLMDNAT 154 (350)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHH-CSCEEEEC-SSCCHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhc-CceEEEeC-CCCCHHH
Confidence 789999999988889999999854543322 256677777654 35555432 2345443
No 305
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=41.91 E-value=57 Score=30.96 Aligned_cols=57 Identities=5% Similarity=0.102 Sum_probs=47.2
Q ss_pred ccCCeEEecC-CCCCHHHHHHHHHc-------CCCcEEEeCCCCcc----HHHHHHHHHHHHHcCCcEE
Q 014285 302 TYGISVVADE-SCRSLNDVQKVMQE-------NLASVVNIKLAKFG----VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 302 ~~~iPIa~dE-~~~~~~~~~~ll~~-------~a~~~i~lk~~~~G----i~~~~~~~~~A~~~gi~~~ 358 (427)
+.++||++.= ...+....+++++. ..++.+.+|.|..= +..++++.++|++.|+.+-
T Consensus 80 ~~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVE 148 (306)
T 3pm6_A 80 AASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATE 148 (306)
T ss_dssp HCSSCEEEEEEEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HCCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 5789999864 45677788999986 25999999999873 7789999999999999885
No 306
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=41.71 E-value=65 Score=30.59 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=29.8
Q ss_pred CCCcEEEeCCCCcc--HH---------HHHHHHHHHHHcCCcEEEcc
Q 014285 326 NLASVVNIKLAKFG--VL---------GTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 326 ~a~~~i~lk~~~~G--i~---------~~~~~~~~A~~~gi~~~~~s 361 (427)
...++|.+|++-+| +. ...++++.|+++|+.+++..
T Consensus 92 ~~~~~vSvKlSalg~~~~~~~~~~~~~~l~~i~~~A~~~~v~v~iDa 138 (312)
T 4h6q_A 92 GIKPYVSIKLSSVGQGKDENGEDLGLTNARRIIAKAKEYGGFICLDM 138 (312)
T ss_dssp TCCCEEEECGGGTTTTCEETTEEHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEehhhcccccCcccHHHHHHHHHHHHHHHHHcCCEEEEcc
Confidence 45679999999888 33 47788999999999999964
No 307
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=41.68 E-value=64 Score=31.87 Aligned_cols=63 Identities=22% Similarity=0.359 Sum_probs=42.8
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHH-------HHHHHHHHHHcCCcEEEcccCchh
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLG-------TLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~-------~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
..|+.||+|.--.+...+..+... .+|+|-+|.+.+- +.. ...++.+|+..|+.++.-+ +|+.
T Consensus 168 ~~G~~ialDDFG~g~ssl~~L~~l-~~d~iKID~s~v~~~~~~~~~~~il~~ii~la~~lg~~vvAEG-VEt~ 238 (431)
T 2bas_A 168 TYGIKIAVDNIGKESSNLDRIALL-SPDLLKIDLQALKVSQPSPSYEHVLYSISLLARKIGAALLYED-IEAN 238 (431)
T ss_dssp TTTCEEEEEEETTTBCCHHHHHHH-CCSEEEEECTTTC----CCHHHHHHHHHHHHHHHHTCEEEEEC-CCSH
T ss_pred HCCCEEEEECCCCCcHHHHHHHhC-CCCEEEECHHHHhhhhcCHhHHHHHHHHHHHHHHcCCEEEEEe-CCCH
Confidence 356778887644444444444433 5899999998874 442 5668899999999999887 5764
No 308
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=41.56 E-value=1.2e+02 Score=26.51 Aligned_cols=90 Identities=14% Similarity=0.220 Sum_probs=61.0
Q ss_pred CHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc
Q 014285 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF 338 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~ 338 (427)
+++++.+.++++-+.++. +||=..+..+. ...+.. +++ ..+.+..|= +....+++.+++.+ +|++..- .
T Consensus 23 ~~~~~~~~~~~l~~gGv~--~iel~~k~~~~--~~~i~~-~~~-~~~~~gag~-vl~~d~~~~A~~~G-Ad~v~~~-~-- 91 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVG--ALEITLRTEKG--LEALKA-LRK-SGLLLGAGT-VRSPKEAEAALEAG-AAFLVSP-G-- 91 (207)
T ss_dssp SCCCHHHHHHHHHHTTCC--EEEEECSSTHH--HHHHHH-HTT-SSCEEEEES-CCSHHHHHHHHHHT-CSEEEES-S--
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEeCCChHH--HHHHHH-HhC-CCCEEEeCe-EeeHHHHHHHHHcC-CCEEEcC-C--
Confidence 456678889999888886 89987764433 222222 233 567777775 66778888888886 6666532 1
Q ss_pred cHHHHHHHHHHHHHcCCcEEEccc
Q 014285 339 GVLGTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 339 Gi~~~~~~~~~A~~~gi~~~~~s~ 362 (427)
. -..+++.++.+|+++.++..
T Consensus 92 -~--d~~v~~~~~~~g~~~i~G~~ 112 (207)
T 2yw3_A 92 -L--LEEVAALAQARGVPYLPGVL 112 (207)
T ss_dssp -C--CHHHHHHHHHHTCCEEEEEC
T ss_pred -C--CHHHHHHHHHhCCCEEecCC
Confidence 1 14677788889999998754
No 309
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=41.52 E-value=1.6e+02 Score=28.44 Aligned_cols=84 Identities=14% Similarity=0.234 Sum_probs=48.4
Q ss_pred CCcEEEEeCCCCCCHHHHHHHHHHhhhCC--CCCceEe---CCCCCCCh----hhHHHHHHhhccccCCeEEecCCC--C
Q 014285 246 PHCSFILDANEGYTSEEAVEVLGKLNDMG--VIPVLFE---QPVHRDDW----SGLHDVSNFARDTYGISVVADESC--R 314 (427)
Q Consensus 246 ~~~~L~vDAN~~~s~~~A~~~l~~L~~~~--l~~~~iE---qP~~~~d~----~~~~~L~~~~r~~~~iPIa~dE~~--~ 314 (427)
|+.-+..+-+...+.+++.+.++.+.... +|+...- ||--..++ +.+++|+ +.+++||...+-- .
T Consensus 143 P~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~----~~~~~PVivK~vg~g~ 218 (365)
T 3sr7_A 143 PHLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYA----KKLQLPFILKEVGFGM 218 (365)
T ss_dssp --CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHH----HHCCSCEEEEECSSCC
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHH----HhhCCCEEEEECCCCC
Confidence 66666666666666776666666554321 2211221 22212234 3344554 4689999999621 6
Q ss_pred CHHHHHHHHHcCCCcEEEeC
Q 014285 315 SLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 315 ~~~~~~~ll~~~a~~~i~lk 334 (427)
+.++.+.+.+.+ +|+|.+.
T Consensus 219 s~e~A~~l~~aG-ad~I~V~ 237 (365)
T 3sr7_A 219 DVKTIQTAIDLG-VKTVDIS 237 (365)
T ss_dssp CHHHHHHHHHHT-CCEEECC
T ss_pred CHHHHHHHHHcC-CCEEEEe
Confidence 788888888875 7888764
No 310
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=41.41 E-value=15 Score=36.27 Aligned_cols=21 Identities=14% Similarity=0.254 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHcCCcEEEcc
Q 014285 341 LGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 341 ~~~~~~~~~A~~~gi~~~~~s 361 (427)
....+++.+|+++||.+.+|.
T Consensus 200 ~~L~~i~~~Aee~GV~Laiep 220 (386)
T 3bdk_A 200 YFIKAILPTAEEAGVKMAIHP 220 (386)
T ss_dssp HHHHHHHHHHHSSSCEEEECC
T ss_pred HHHHHHHHHHHHhCCEEEEee
Confidence 346788999999999999985
No 311
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=40.29 E-value=2e+02 Score=27.08 Aligned_cols=107 Identities=13% Similarity=0.126 Sum_probs=66.1
Q ss_pred HHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCC----
Q 014285 209 SELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPV---- 284 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~---- 284 (427)
.+.++...+.|+..+-+..|.. .+.++.+|+. ++.+.+.. -+.++|.. +.+.+.....++-+-
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p----~~~i~~l~~~--g~~v~~~v---~~~~~a~~----~~~~GaD~i~v~g~~~GG~ 144 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNP----SKYMERFHEA--GIIVIPVV---PSVALAKR----MEKIGADAVIAEGMEAGGH 144 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCG----GGTHHHHHHT--TCEEEEEE---SSHHHHHH----HHHTTCSCEEEECTTSSEE
T ss_pred HHHHHHHHHCCCCEEEECCCCh----HHHHHHHHHc--CCeEEEEe---CCHHHHHH----HHHcCCCEEEEECCCCCCC
Confidence 3445566778999998877742 2346666664 45666554 24555543 333333323454221
Q ss_pred --CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 285 --HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 285 --~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
...+++.++++.+ ..++||.+.=-+.+..++.+++..+ +|.+++
T Consensus 145 ~g~~~~~~ll~~i~~----~~~iPViaaGGI~~~~~~~~al~~G-AdgV~v 190 (332)
T 2z6i_A 145 IGKLTTMTLVRQVAT----AISIPVIAAGGIADGEGAAAGFMLG-AEAVQV 190 (332)
T ss_dssp CCSSCHHHHHHHHHH----HCSSCEEEESSCCSHHHHHHHHHTT-CSEEEE
T ss_pred CCCccHHHHHHHHHH----hcCCCEEEECCCCCHHHHHHHHHcC-CCEEEe
Confidence 1123455556554 5689998888888899999999876 788775
No 312
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=39.96 E-value=1.1e+02 Score=28.74 Aligned_cols=70 Identities=13% Similarity=0.006 Sum_probs=53.3
Q ss_pred HHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhcccc--CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc
Q 014285 264 VEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY--GISVVADESCRSLNDVQKVMQENLASVVNIKLAKF 338 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~--~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~ 338 (427)
..+...-+.+++|+.++|-=-...+.+-.+++++ .+ .+||..+=-+.+.++++++++.+ +|.|++--..+
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~~~v~~e~V~~I~~----~~~~~iPV~vGGGIrs~Eda~~ll~aG-AD~VVVGSAav 260 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRNEHVPPEVVRHFRK----GLGPDQVLFVSGNVRSGRQVTEYLDSG-ADYVGFAGALE 260 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSSSCCCHHHHHHHHH----HSCTTCEEEEESSCCSHHHHHHHHHTT-CSEEEESGGGS
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcCCHHHHHHHHH----hcCCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEECchhh
Confidence 6777777888888888884334445566677765 56 79999999999999999999876 78888765443
No 313
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=39.88 E-value=61 Score=30.07 Aligned_cols=93 Identities=16% Similarity=0.214 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEE---------EeCCCCC-----C---HHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFI---------LDANEGY-----T---SEEAVEV 266 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~---------vDAN~~~-----s---~~~A~~~ 266 (427)
++++..+.+.++.+.|-..+|+--| ++-.++++++.+.+ +.++ +-..++| + .+++++.
T Consensus 92 ~~~~a~~~a~rl~kaGa~aVklEgg---~e~~~~I~al~~ag--ipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~r 166 (264)
T 1m3u_A 92 TPEQAFENAATVMRAGANMVKIEGG---EWLVETVQMLTERA--VPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSD 166 (264)
T ss_dssp SHHHHHHHHHHHHHTTCSEEECCCS---GGGHHHHHHHHHTT--CCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCc---HHHHHHHHHHHHCC--CCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHH
Confidence 7888888888888899999999877 34577888888765 2222 1011223 3 3677888
Q ss_pred HHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 267 l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
++++++.|-...++|-. +. +..+++++ ..++|+..
T Consensus 167 A~a~~eAGA~~ivlE~v-p~---~~a~~it~----~l~iP~ig 201 (264)
T 1m3u_A 167 ALALEAAGAQLLVLECV-PV---ELAKRITE----ALAIPVIG 201 (264)
T ss_dssp HHHHHHHTCCEEEEESC-CH---HHHHHHHH----HCSSCEEE
T ss_pred HHHHHHCCCcEEEEecC-CH---HHHHHHHH----hCCCCEEE
Confidence 88898887655578874 32 45677876 57788754
No 314
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=39.87 E-value=2.4e+02 Score=26.36 Aligned_cols=141 Identities=17% Similarity=0.193 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHHh-C-CCcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHAV-H-PHCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~~-~-~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
+.+.-..++++.++.|-+-|-+-+ |. +.+.-.+-+++|++. . +-+++.+... -++.++-.+..+...+.+.
T Consensus 124 ~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~-~Lt~eei~~A~~ia~eaGA 202 (288)
T 3oa3_A 124 STDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETS-QLTADEIIAGCVLSSLAGA 202 (288)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGG-GCCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECC-CCCHHHHHHHHHHHHHcCC
Confidence 444446788888999999998665 32 344445567777774 3 3366677654 5687775555555567775
Q ss_pred CCceEeCCCC---C----CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHH
Q 014285 276 IPVLFEQPVH---R----DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIK 348 (427)
Q Consensus 276 ~~~~iEqP~~---~----~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~ 348 (427)
. ||=-..- . +|.+-|++..+.. ..++||-.-=-+.+..++..+++.++ .++|.+...++++
T Consensus 203 D--fVKTSTGf~~~GAT~edv~lmr~~v~~~--g~~v~VKAAGGIrt~edAl~mi~aGA--------~RiGtS~g~~I~~ 270 (288)
T 3oa3_A 203 D--YVKTSTGFNGPGASIENVSLMSAVCDSL--QSETRVKASGGIRTIEDCVKMVRAGA--------ERLGASAGVKIVN 270 (288)
T ss_dssp S--EEECCCSSSSCCCCHHHHHHHHHHHHHS--SSCCEEEEESSCCSHHHHHHHHHTTC--------SEEEESCHHHHHH
T ss_pred C--EEEcCCCCCCCCCCHHHHHHHHHHHHHh--CCCceEEEeCCCCCHHHHHHHHHcCC--------ceeehhhHHHHHH
Confidence 4 7766531 1 2555666654210 13455533224778899999999875 3568777788888
Q ss_pred HHHHcCCcE
Q 014285 349 ATRKSGLHL 357 (427)
Q Consensus 349 ~A~~~gi~~ 357 (427)
-++.+|+..
T Consensus 271 ~~~~~~~~~ 279 (288)
T 3oa3_A 271 ETRLGNRQV 279 (288)
T ss_dssp HHTC-----
T ss_pred HHHhcCCCC
Confidence 888888754
No 315
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=39.64 E-value=2.6e+02 Score=26.88 Aligned_cols=134 Identities=12% Similarity=0.146 Sum_probs=70.6
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQP 283 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP 283 (427)
+++...+.+++..+.|+..+ .+++.. ...+..+.+.+.+.+ -+.+|.+... .+ |. +|
T Consensus 140 d~~~~~~~i~~~~~~g~~v~-~~v~~~--~~~e~a~~~~~agad-~i~i~~~~~~------------~~------~~-~~ 196 (393)
T 2qr6_A 140 DTELLSERIAQVRDSGEIVA-VRVSPQ--NVREIAPIVIKAGAD-LLVIQGTLIS------------AE------HV-NT 196 (393)
T ss_dssp CHHHHHHHHHHHHHTTSCCE-EEECTT--THHHHHHHHHHTTCS-EEEEECSSCC------------SS------CC-CC
T ss_pred CHHHHHHHHHHHhhcCCeEE-EEeCCc--cHHHHHHHHHHCCCC-EEEEeCCccc------------cc------cC-CC
Confidence 45666666667767787654 245442 233344444455544 2345543210 00 11 11
Q ss_pred CCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC--------Ccc---HHHHHHHHHHH--
Q 014285 284 VHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA--------KFG---VLGTLQIIKAT-- 350 (427)
Q Consensus 284 ~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~--------~~G---i~~~~~~~~~A-- 350 (427)
...|+.+.++++ .+++||..+ .+.+..+.+.+++.+ +|.|.+-.. -.| +....++.+.+
T Consensus 197 --~~~~~~i~~l~~----~~~~pvi~g-gi~t~e~a~~~~~~G-ad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~ 268 (393)
T 2qr6_A 197 --GGEALNLKEFIG----SLDVPVIAG-GVNDYTTALHMMRTG-AVGIIVGGGENTNSLALGMEVSMATAIADVAAARRD 268 (393)
T ss_dssp -------CHHHHHH----HCSSCEEEE-CCCSHHHHHHHHTTT-CSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHH----hcCCCEEEC-CcCCHHHHHHHHHcC-CCEEEECCCcccccccCCCCCChHHHHHHHHHHHHH
Confidence 114555677765 578999874 567888988888764 888888220 113 22222333321
Q ss_pred --HHcC---CcEEEcccCchhHH
Q 014285 351 --RKSG---LHLMIDGMIETRLA 368 (427)
Q Consensus 351 --~~~g---i~~~~~s~~es~ig 368 (427)
.+.+ ++++..+-+.++--
T Consensus 269 ~~~~~~~~~ipvia~GGI~~~~d 291 (393)
T 2qr6_A 269 YLDETGGRYVHIIADGSIENSGD 291 (393)
T ss_dssp HHHHHTSCCCEEEECSSCCSHHH
T ss_pred hHhhcCCcceEEEEECCCCCHHH
Confidence 1144 99998876655433
No 316
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=39.51 E-value=1.9e+02 Score=27.25 Aligned_cols=91 Identities=22% Similarity=0.236 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec-----cC---CchhhHHHH----HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV-----GR---NITADFDVL----QAIHAVHPHCSFILDANEGYTSEEAVEVLGKLN 271 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi-----G~---~~~~d~~~l----~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~ 271 (427)
+++.+.+.+++++++|-..|-+-. |. +.+++++|+ ++|++. .++.|.||. |.++.|.+-++.
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~-~~vpiSIDT---~~~~Va~aAl~a-- 104 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKE-SDVLISIDT---WKSQVAEAALAA-- 104 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEC---SCHHHHHHHHHT--
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhh-CCceEEEeC---CCHHHHHHHHHc--
Confidence 567788899999999999987765 22 235677764 444543 378999995 555665555554
Q ss_pred hCCCCCceEeCCCCC-CChhhHHHHHHhhccccCCeEEe
Q 014285 272 DMGVIPVLFEQPVHR-DDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 272 ~~~l~~~~iEqP~~~-~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
|.+ +|=+=--. .| +.|.++++ +.+.|+.+
T Consensus 105 --Ga~--iINDVsg~~~d-~~m~~v~a----~~~~~vvl 134 (314)
T 2vef_A 105 --GAD--LVNDITGLMGD-EKMPHVVA----EARAQVVI 134 (314)
T ss_dssp --TCC--EEEETTTTCSC-TTHHHHHH----HHTCEEEE
T ss_pred --CCC--EEEECCCCCCC-hHHHHHHH----HcCCCEEE
Confidence 222 22211110 11 46777765 56777765
No 317
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=38.68 E-value=1.9e+02 Score=28.75 Aligned_cols=96 Identities=11% Similarity=0.129 Sum_probs=59.6
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEec-----cC---CchhhHHH----HHHHHH---hCC-CcEEEEeCCCCCCHHHHHHH
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNV-----GR---NITADFDV----LQAIHA---VHP-HCSFILDANEGYTSEEAVEV 266 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKi-----G~---~~~~d~~~----l~~ir~---~~~-~~~L~vDAN~~~s~~~A~~~ 266 (427)
.+.+++.+.+++++++|-..|-+-. |. +.+++++| ++++++ ..+ ++.|.||. |.++.|.+.
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT---~~~~VaeaA 285 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDT---RKLEVMQKI 285 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEEC---CCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeC---CCHHHHHHH
Confidence 5677888999999999999887763 21 34667776 466666 233 89999996 455655555
Q ss_pred HHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 267 LGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 267 l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
++.....++ .|=+= .....+.|..+++ +.+.|+.+
T Consensus 286 L~~~aGa~i---~INDV-sg~~d~~m~~v~a----~~g~~vVl 320 (442)
T 3mcm_A 286 LAKHHDIIW---MINDV-ECNNIEQKAQLIA----KYNKKYVI 320 (442)
T ss_dssp HHHHGGGCC---EEEEC-CCTTHHHHHHHHH----HHTCEEEE
T ss_pred HhhCCCCCE---EEEcC-CCCCChHHHHHHH----HhCCeEEE
Confidence 553333222 01110 1123457777775 57788876
No 318
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=38.23 E-value=3.8e+02 Score=29.51 Aligned_cols=97 Identities=16% Similarity=0.193 Sum_probs=62.2
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeC----CCCC----------CChhhHHHHHHhhc
Q 014285 235 FDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ----PVHR----------DDWSGLHDVSNFAR 300 (427)
Q Consensus 235 ~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEq----P~~~----------~d~~~~~~L~~~~r 300 (427)
.+.++.+++..|+..+.+=-+.+.++++..+.++.+++.+.. .||= |... .+.+.+.++.+.++
T Consensus 622 ~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d--~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~ 699 (1025)
T 1gte_A 622 CQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGAD--ALELNLSCPHGMGERGMGLACGQDPELVRNICRWVR 699 (1025)
T ss_dssp HHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCS--EEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCC--EEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHH
Confidence 345666777677777777667788899988999888776653 6664 4431 23444555555555
Q ss_pred cccCCeEEecC--CCCCHHHHHHHHHcCCCcEEEe
Q 014285 301 DTYGISVVADE--SCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 301 ~~~~iPIa~dE--~~~~~~~~~~ll~~~a~~~i~l 333 (427)
+.+++||..-. .+.+..++.+.+....+|+|.+
T Consensus 700 ~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 700 QAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp HHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred HhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 56788987643 2334555555555555788777
No 319
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=38.02 E-value=2.2e+02 Score=25.50 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=0.0
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhC--CCcEEEEeC---CCCC---------C
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVH--PHCSFILDA---NEGY---------T 259 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~--~~~~L~vDA---N~~~---------s 259 (427)
+|+-...++.+.++ ++++.+.|.. |+-+|...-++-+.++.+.+.+ ..+.+.+|+ +..+ +
T Consensus 76 ~pl~vGGGIrs~e~----~~~~l~~Gad--kVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~ 149 (243)
T 4gj1_A 76 VNLQVGGGIRSKEE----VKALLDCGVK--RVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEAS 149 (243)
T ss_dssp SEEEEESSCCCHHH----HHHHHHTTCS--EEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------
T ss_pred CCeEeccccccHHH----HHHHHHcCCC--EEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecc
Q ss_pred HHHHHHHHHHhhhCCCCCceEeCCCCCC------ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 260 SEEAVEVLGKLNDMGVIPVLFEQPVHRD------DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 260 ~~~A~~~l~~L~~~~l~~~~iEqP~~~~------d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
.-++.++++.+.++++. +.+=--+..| |++.++++++. .+.+||.+.=-+.+..|++++ ...++.+.+
T Consensus 150 ~~~~~~~~~~~~~~g~~-eil~t~Id~DGt~~G~d~~l~~~l~~~---~~~ipviasGGv~~~~Dl~~l--~~~~~gviv 223 (243)
T 4gj1_A 150 DKKLMEVLDFYSNKGLK-HILCTDISKDGTMQGVNVRLYKLIHEI---FPNICIQASGGVASLKDLENL--KGICSGVIV 223 (243)
T ss_dssp CCBHHHHHHHHHTTTCC-EEEEEETTC-----CCCHHHHHHHHHH---CTTSEEEEESCCCSHHHHHHT--TTTCSEEEE
T ss_pred cchHHHHHHHHhhcCCc-EEEeeeecccccccCCCHHHHHHHHHh---cCCCCEEEEcCCCCHHHHHHH--HccCchheh
Q ss_pred CCCCc-c---HHHHHHHHH
Q 014285 334 KLAKF-G---VLGTLQIIK 348 (427)
Q Consensus 334 k~~~~-G---i~~~~~~~~ 348 (427)
--... | +.+++++.+
T Consensus 224 g~Al~~g~i~l~ea~~~l~ 242 (243)
T 4gj1_A 224 GKALLDGVFSVEEGIRCLA 242 (243)
T ss_dssp CHHHHTTSSCHHHHHHHHC
T ss_pred HHHHHCCCCCHHHHHHHhh
No 320
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=37.89 E-value=2.3e+02 Score=26.50 Aligned_cols=92 Identities=15% Similarity=0.161 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec-----cC---CchhhHHHHHHH-HHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV-----GR---NITADFDVLQAI-HAV-HPHCSFILDANEGYTSEEAVEVLGKLNDM 273 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi-----G~---~~~~d~~~l~~i-r~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~ 273 (427)
+++.+.+.+++++++|-..|-+-. |. +.+++++++.-+ +.+ ..++.|.||. |+++.|.+-++.=.+
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT---~~~~Va~aAl~aGa~- 119 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDT---YKPAVMRAALAAGAD- 119 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEEC---CCHHHHHHHHHHTCS-
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEEC---CCHHHHHHHHHcCCC-
Confidence 667888899999999999988876 31 446777765333 222 1288999995 455555555554221
Q ss_pred CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 274 ~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
.|=+= ...+.+.|..+++ +.+.|+.+
T Consensus 120 -----iINdV-sg~~d~~m~~~~a----~~~~~vVl 145 (294)
T 2y5s_A 120 -----LINDI-WGFRQPGAIDAVR----DGNSGLCA 145 (294)
T ss_dssp -----EEEET-TTTCSTTHHHHHS----SSSCEEEE
T ss_pred -----EEEEC-CCCCchHHHHHHH----HhCCCEEE
Confidence 12111 1111346777775 67888876
No 321
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=37.38 E-value=12 Score=36.60 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=25.1
Q ss_pred hhheeccccccceeeeccccccccccccCCcceeeEE
Q 014285 32 IKFCVSNVMAETTTVRTSERTSLGFKNLTETFWVDVQ 68 (427)
Q Consensus 32 ~~~~~~~~~~~~~~f~~~~~ts~g~~~~~~~~~~~I~ 68 (427)
|+.|+.++.++.+.|++|-.||+|..+.++++.++|+
T Consensus 2 m~~m~i~~~~~~~pl~~p~~~s~~~~~~~~~v~V~vt 38 (377)
T 2pge_A 2 LSGMELSYRRSDLIFKRPAGTSRGVLTSKPTWFVRLD 38 (377)
T ss_dssp -CCCEEEEEECCEEBCC-------CCCEECEEEEEEE
T ss_pred CcceEEEEEEEeecccCcceeccEEEeecceEEEEEE
Confidence 4567889999999999999999999998888888874
No 322
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=37.29 E-value=2.9e+02 Score=26.63 Aligned_cols=157 Identities=11% Similarity=0.131 Sum_probs=84.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQP 283 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP 283 (427)
+.++..+.++.+.+.|+..|-+-.+.....|.+.++.+++.+....+..-+. . ..++..+.+ +.++. .+-=.
T Consensus 23 ~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~~~~~v~~~~r-~-~~~di~~a~----~~g~~--~v~i~ 94 (382)
T 2ztj_A 23 STQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKAKVVTHIQ-C-RLDAAKVAV----ETGVQ--GIDLL 94 (382)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEEEEEE-S-CHHHHHHHH----HTTCS--EEEEE
T ss_pred CHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcCCCcEEEEEcc-c-ChhhHHHHH----HcCCC--EEEEE
Confidence 5788888888888899998888554445677888888888766555543221 1 234322222 22332 22211
Q ss_pred CCCCC-------------hhhHHHHHHhhccccC--CeEEec-CCC--CCHHHH----HHHHHcCCCcEEEeCCCC-cc-
Q 014285 284 VHRDD-------------WSGLHDVSNFARDTYG--ISVVAD-ESC--RSLNDV----QKVMQENLASVVNIKLAK-FG- 339 (427)
Q Consensus 284 ~~~~d-------------~~~~~~L~~~~r~~~~--iPIa~d-E~~--~~~~~~----~~ll~~~a~~~i~lk~~~-~G- 339 (427)
++..+ ++.+.+..+.++ +.+ +.+..+ |.. .++..+ +.+.+. ++.|.++=+. .+
T Consensus 95 ~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak-~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~--a~~i~l~DT~G~~~ 171 (382)
T 2ztj_A 95 FGTSKYLRAPHGRDIPRIIEEAKEVIAYIR-EAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY--VDRVGLADTVGVAT 171 (382)
T ss_dssp ECC--------CCCHHHHHHHHHHHHHHHH-HHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG--CSEEEEEETTSCCC
T ss_pred eccCHHHHHHhCCCHHHHHHHHHHHHHHHH-HcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh--cCEEEecCCCCCCC
Confidence 11111 233333333332 345 666555 322 233332 334444 7777775443 23
Q ss_pred HHHHHHHHHHHHHc---CCcEEEcccCchhHHHHH
Q 014285 340 VLGTLQIIKATRKS---GLHLMIDGMIETRLATGF 371 (427)
Q Consensus 340 i~~~~~~~~~A~~~---gi~~~~~s~~es~ig~~a 371 (427)
.....++++..++. ++++-+|+-...|++.+.
T Consensus 172 P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN 206 (382)
T 2ztj_A 172 PRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIAN 206 (382)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHH
Confidence 45566666655543 678888876566655553
No 323
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=36.58 E-value=1.9e+02 Score=28.86 Aligned_cols=97 Identities=19% Similarity=0.277 Sum_probs=57.2
Q ss_pred HHHHHHHhhhCCCCCceEeCCCCCC----ChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 263 AVEVLGKLNDMGVIPVLFEQPVHRD----DWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 263 A~~~l~~L~~~~l~~~~iEqP~~~~----d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
..+.++.+.+.++. .++=-...+ .++.++++++ .+ ++||..+ ...+..+.+.+.+.+ +|+|.+-..-
T Consensus 238 ~~~~a~~l~~aGvd--~v~i~~~~G~~~~~~e~i~~i~~----~~p~~pvi~g-~~~t~e~a~~l~~~G-~d~I~v~~~~ 309 (494)
T 1vrd_A 238 TMERVEKLVKAGVD--VIVIDTAHGHSRRVIETLEMIKA----DYPDLPVVAG-NVATPEGTEALIKAG-ADAVKVGVGP 309 (494)
T ss_dssp HHHHHHHHHHTTCS--EEEECCSCCSSHHHHHHHHHHHH----HCTTSCEEEE-EECSHHHHHHHHHTT-CSEEEECSSC
T ss_pred HHHHHHHHHHhCCC--EEEEEecCCchHHHHHHHHHHHH----HCCCceEEeC-CcCCHHHHHHHHHcC-CCEEEEcCCC
Confidence 34556666666653 555333333 3344555554 45 6898765 567888888888765 8888872210
Q ss_pred -----------cc---HHHHHHHHHHHHHcCCcEEEcccCchhH
Q 014285 338 -----------FG---VLGTLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 338 -----------~G---i~~~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
+| +....++.+.+++.+++++..+-+.++-
T Consensus 310 G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~ 353 (494)
T 1vrd_A 310 GSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSG 353 (494)
T ss_dssp STTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHH
T ss_pred CccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHH
Confidence 12 2333445555555699999877665543
No 324
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=36.18 E-value=2.4e+02 Score=25.29 Aligned_cols=112 Identities=13% Similarity=0.072 Sum_probs=75.1
Q ss_pred HHHHHHHHHhCC-CcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCC
Q 014285 235 FDVLQAIHAVHP-HCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESC 313 (427)
Q Consensus 235 ~~~l~~ir~~~~-~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~ 313 (427)
.+.++.|++..+ .+.+-||+ ++.++.++-+++|.+..-+ ..|==|...+-+...++|. .-+|++-.- -+
T Consensus 43 ~~~~~ei~~~v~G~Vs~EV~a---~d~e~mi~eA~~L~~~~~n-v~IKIP~T~eGl~A~~~L~-----~~GI~vn~T-li 112 (223)
T 3s1x_A 43 GDIIREILKIVDGPVSVEVVS---TKYEGMVEEARKIHGLGDN-AVVKIPMTEDGLRAIKTLS-----SEHINTNCT-LV 112 (223)
T ss_dssp HHHHHHHHHHCSSCEEEECCC---CSHHHHHHHHHHHHHTCTT-EEEEEESSHHHHHHHHHHH-----HTTCCEEEE-EE
T ss_pred HHHHHHHHHhCCCCEEEEEcc---CCHHHHHHHHHHHHHhCCC-EEEEeCCCHHHHHHHHHHH-----HCCCcEEEE-Ee
Confidence 357777887543 46667774 7888777777777765433 4788888643334444454 246766432 46
Q ss_pred CCHHHHHHHHHcCCCcEEEeCCCC------ccHHHHHHHHHHHHHcCCcE
Q 014285 314 RSLNDVQKVMQENLASVVNIKLAK------FGVLGTLQIIKATRKSGLHL 357 (427)
Q Consensus 314 ~~~~~~~~ll~~~a~~~i~lk~~~------~Gi~~~~~~~~~A~~~gi~~ 357 (427)
++..+.....+++ ++|+.|=.++ -|+.-..++.++-+.+|.+.
T Consensus 113 fS~~QA~~Aa~AG-a~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T 161 (223)
T 3s1x_A 113 FNPIQALLAAKAG-VTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKT 161 (223)
T ss_dssp CSHHHHHHHHHTT-CSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHHHHcC-CeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCCCC
Confidence 8888887777776 7899985544 35667788888889888664
No 325
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=36.06 E-value=2.9e+02 Score=26.27 Aligned_cols=107 Identities=19% Similarity=0.151 Sum_probs=67.6
Q ss_pred HHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCC----
Q 014285 210 ELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVH---- 285 (427)
Q Consensus 210 ~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~---- 285 (427)
+.++...+.|...+-+..|.. +.+.++.+++. ++.+.++.+ ++++|....+ .+.....++-|..
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~~---~~~~i~~~~~~--g~~v~~~v~---t~~~a~~a~~----~GaD~i~v~g~~~GGh~ 180 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGVP---DREVIARLRRA--GTLTLVTAT---TPEEARAVEA----AGADAVIAQGVEAGGHQ 180 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSCC---CHHHHHHHHHT--TCEEEEEES---SHHHHHHHHH----TTCSEEEEECTTCSEEC
T ss_pred HHHHHHHhcCCCEEEEeCCCC---cHHHHHHHHHC--CCeEEEECC---CHHHHHHHHH----cCCCEEEEeCCCcCCcC
Confidence 344455678999888887753 23456666664 466777664 6777654433 2322123443321
Q ss_pred -------------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 286 -------------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 286 -------------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
...++.++++++ ..++||.++=-+.+..++.++++.+ +|.+++
T Consensus 181 g~~~~~~~~~~~~~~~~~~l~~i~~----~~~iPViaaGGI~~~~~~~~~l~~G-Ad~V~v 236 (369)
T 3bw2_A 181 GTHRDSSEDDGAGIGLLSLLAQVRE----AVDIPVVAAGGIMRGGQIAAVLAAG-ADAAQL 236 (369)
T ss_dssp CCSSCCGGGTTCCCCHHHHHHHHHH----HCSSCEEEESSCCSHHHHHHHHHTT-CSEEEE
T ss_pred CCcccccccccccccHHHHHHHHHH----hcCceEEEECCCCCHHHHHHHHHcC-CCEEEE
Confidence 112555666654 4689998888888999999999977 788775
No 326
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=36.05 E-value=3e+02 Score=26.41 Aligned_cols=118 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC-------------------------------------------CchhhHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR-------------------------------------------NITADFDVLQA 240 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~-------------------------------------------~~~~d~~~l~~ 240 (427)
+++.+.+.+++..+.||..+-+.++. +.....+.++.
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~ 223 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEE 223 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHH
Q ss_pred HHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE------eCCCCCCChhhHHHHHHhhcccc--CCeEEecCC
Q 014285 241 IHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF------EQPVHRDDWSGLHDVSNFARDTY--GISVVADES 312 (427)
Q Consensus 241 ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i------EqP~~~~d~~~~~~L~~~~r~~~--~iPIa~dE~ 312 (427)
||+.. ++.+.|= +..++++| +.+.+.+.....+ .--..+.+++.+.++.+ .. .+||..+=-
T Consensus 224 lr~~~-~~PvivK--~v~~~e~a----~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~----~v~~~ipVia~GG 292 (368)
T 2nli_A 224 IAGHS-GLPVFVK--GIQHPEDA----DMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAE----RVNKRVPIVFDSG 292 (368)
T ss_dssp HHHHS-SSCEEEE--EECSHHHH----HHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHH----HHTTSSCEEECSS
T ss_pred HHHHc-CCCEEEE--cCCCHHHH----HHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHH----HhCCCCeEEEECC
Q ss_pred CCCHHHHHHHHHcCCCcEEEe
Q 014285 313 CRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 313 ~~~~~~~~~ll~~~a~~~i~l 333 (427)
+.+..|+.+++..+ +|.+.+
T Consensus 293 I~~g~D~~kalalG-Ad~V~i 312 (368)
T 2nli_A 293 VRRGEHVAKALASG-ADVVAL 312 (368)
T ss_dssp CCSHHHHHHHHHTT-CSEEEE
T ss_pred CCCHHHHHHHHHcC-CCEEEE
No 327
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=35.80 E-value=70 Score=30.55 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=46.4
Q ss_pred cCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCCCCcc----HHHHHHHHHHHHHcCCcEE
Q 014285 303 YGISVVADE-SCRSLNDVQKVMQENLASVVNIKLAKFG----VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 303 ~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~~~~G----i~~~~~~~~~A~~~gi~~~ 358 (427)
.++||++.= ...+...+++.++.+ ++.+.+|.|..= +..++++.++|+++|+.+-
T Consensus 74 ~~VPValHlDHg~~~e~i~~ai~~G-FtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVE 133 (323)
T 2isw_A 74 PDIPICIHLDHGDTLESVKMAIDLG-FSSVMIDASHHPFDENVRITKEVVAYAHARSVSVE 133 (323)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHTT-CSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcC-CCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 679998874 556778889999986 899999999873 7779999999999999883
No 328
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=35.76 E-value=1.8e+02 Score=28.40 Aligned_cols=53 Identities=15% Similarity=0.397 Sum_probs=25.3
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEcc
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s 361 (427)
+.++|+.. +..+..++..+.+ . ++++++-...+- . ..+++.+.+.|.++.+..
T Consensus 204 ~~Gl~~~t--e~~d~~~~~~l~~-~-vd~lkIgs~~~~--n-~~LL~~~a~~gkPVilk~ 256 (385)
T 3nvt_A 204 EYGLGVIS--EIVTPADIEVALD-Y-VDVIQIGARNMQ--N-FELLKAAGRVDKPILLKR 256 (385)
T ss_dssp HHTCEEEE--ECCSGGGHHHHTT-T-CSEEEECGGGTT--C-HHHHHHHHTSSSCEEEEC
T ss_pred HcCCEEEE--ecCCHHHHHHHHh-h-CCEEEECccccc--C-HHHHHHHHccCCcEEEec
Confidence 46666665 3444444443332 2 555555432221 1 233444455666666554
No 329
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=35.63 E-value=2.8e+02 Score=25.97 Aligned_cols=150 Identities=9% Similarity=0.144 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|.+.+=+--.. +.++=.+.++.+.+ ....+.+.+ .-++-+.+++++..+..++.|..
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA-GAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHhcCCC
Confidence 56778888999999999887433211 33444556777777 456777777 45667899999999999988754
Q ss_pred CceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|. ++.+ ++-++++++ .+++||.+=. .-.+.+.+.++.+.. ++++-+|-+- | +....
T Consensus 120 avlv~~P~y~~~~~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La~~~-pnIvgiKdss-gd~~~~~ 193 (315)
T 3si9_A 120 AVLVVTPYYNRPNQRGLYTHFSSIAK----AISIPIIIYNIPSRSVIDMAVETMRDLCRDF-KNIIGVKDAT-GKIERAS 193 (315)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HCSSCEEEEECHHHHSCCCCHHHHHHHHHHC-TTEEEEEECS-CCTHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----cCCCCEEEEeCchhhCCCCCHHHHHHHHhhC-CCEEEEEeCC-CCHHHHH
Confidence 22333443 1222 223455554 5799998753 234566677887633 6889999774 6 77766
Q ss_pred HHHHHHHHcCCcEEEcc
Q 014285 345 QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~s 361 (427)
++++.+ ..++.+..+.
T Consensus 194 ~l~~~~-~~~f~v~~G~ 209 (315)
T 3si9_A 194 EQREKC-GKDFVQLSGD 209 (315)
T ss_dssp HHHHHH-CSSSEEEESC
T ss_pred HHHHHc-CCCeEEEecC
Confidence 666544 2356665543
No 330
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=35.48 E-value=3.8e+02 Score=27.44 Aligned_cols=140 Identities=20% Similarity=0.280 Sum_probs=88.9
Q ss_pred eeeeeeecCCCHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhh
Q 014285 194 LSTAITIPAVSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 194 ip~~~~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~ 272 (427)
+.+.+.++.. ++..++++.++++|-..+-+..-. .-+.-++.++.||+.+|++.+.+ -.--|.+.|..++++=.+
T Consensus 270 L~VgAAVgv~--~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~via--GNVaT~e~a~~Li~aGAD 345 (556)
T 4af0_A 270 LYCGAAIGTR--PGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIA--GNVVTREQAAQLIAAGAD 345 (556)
T ss_dssp BCCEEEECSS--HHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEE--EEECSHHHHHHHHHHTCS
T ss_pred eeeEEEeccC--ccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEe--ccccCHHHHHHHHHcCCC
Confidence 3344444432 345677888899999988888753 34567889999999999887764 233467777777765332
Q ss_pred ---CCCC--CceEeCCC---CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc
Q 014285 273 ---MGVI--PVLFEQPV---HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG 339 (427)
Q Consensus 273 ---~~l~--~~~iEqP~---~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G 339 (427)
.++- +...=+-+ -..+.....+.++.+ +..++||.+|--+.+..|+.++|..+ +|.+.+--.+.|
T Consensus 346 ~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a-~~~~vpvIADGGI~~sGDi~KAlaaG-Ad~VMlGsllAG 418 (556)
T 4af0_A 346 GLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFA-SRFGIPCIADGGIGNIGHIAKALALG-ASAVMMGGLLAG 418 (556)
T ss_dssp EEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHH-GGGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTT
T ss_pred EEeecCCCCcccccccccCCCCcHHHHHHHHHHHH-HHcCCCEEecCCcCcchHHHHHhhcC-CCEEEEchhhcc
Confidence 1111 00111111 112444444444332 36899999999999999999999886 678887654444
No 331
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=35.47 E-value=2.7e+02 Score=25.67 Aligned_cols=148 Identities=16% Similarity=0.229 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC-------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR-------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~-------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
|.+.+.+.++.+++.|.+.+=+ .|. ..++=.+.++.+.+ ..+.+.+.+ .-++-+.+++++..+..++.|.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~-~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVA-VGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA-GTGANSTREAIELTKAAKDLGA 97 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEE-SSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEE-CccccccccCCHHHHHHHHHHHHHHhCCCCeEEE-eCCCCCHHHHHHHHHHHHhcCC
Confidence 5677788899999999988743 332 33444556777777 456677877 4456788999999999988765
Q ss_pred CCceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHH
Q 014285 276 IPVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGT 343 (427)
Q Consensus 276 ~~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~ 343 (427)
.-..+=-|. ++.+ ++-++++++ .+++||.+=. .-.+.+.+.++. ..++++-+|-+- | +...
T Consensus 98 davlv~~P~y~~~~~~~l~~~f~~ia~----a~~lPiilYn~P~~tg~~l~~~~~~~La--~~pnivgiK~ss-gd~~~~ 170 (291)
T 3tak_A 98 DAALLVTPYYNKPTQEGLYQHYKAIAE----AVELPLILYNVPGRTGVDLSNDTAVRLA--EIPNIVGIKDAT-GDVPRG 170 (291)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHH----HCCSCEEEEECHHHHSCCCCHHHHHHHT--TSTTEEEEEECS-CCHHHH
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHH----hcCCCEEEEecccccCCCCCHHHHHHHH--cCCCEEEEEeCC-CCHHHH
Confidence 422344444 2222 223445554 5789998753 234566667776 347889999764 6 7776
Q ss_pred HHHHHHHHHcCCcEEEcc
Q 014285 344 LQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~~~s 361 (427)
.++++.+. -++.+..+.
T Consensus 171 ~~~~~~~~-~~f~v~~G~ 187 (291)
T 3tak_A 171 KALIDALN-GKMAVYSGD 187 (291)
T ss_dssp HHHHHHHT-TSSEEEECC
T ss_pred HHHHHHcC-CCeEEEECc
Confidence 66665432 356665543
No 332
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=35.40 E-value=2.8e+02 Score=25.93 Aligned_cols=150 Identities=11% Similarity=0.103 Sum_probs=95.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|...+=+-- |- ..++=.+.++.+.+ ....+.+.+ .-++-+.+++++..+..++.|..
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV-SVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHhcCCC
Confidence 567788889999999988765443 21 33444556777777 456677777 34567889999999999987754
Q ss_pred CceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|. ++.+ ++-++++++ .+++||.+=. .-.+.+.+.++... .++++-+|-+- | +....
T Consensus 122 avlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~L~a~-~pnIvgiKdss-gd~~~~~ 195 (315)
T 3na8_A 122 AVMVLPISYWKLNEAEVFQHYRAVGE----AIGVPVMLYNNPGTSGIDMSVELILRIVRE-VDNVTMVKEST-GDIQRMH 195 (315)
T ss_dssp EEEECCCCSSCCCHHHHHHHHHHHHH----HCSSCEEEEECHHHHSCCCCHHHHHHHHHH-STTEEEEEECS-SCHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hCCCcEEEEeCcchhCcCCCHHHHHHHHhc-CCCEEEEECCC-CCHHHHH
Confidence 22333343 1222 223445554 5789998754 13455566777343 47888899774 6 77666
Q ss_pred HHHHHHHHcCCcEEEcc
Q 014285 345 QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~s 361 (427)
++++... -++.+..+.
T Consensus 196 ~~~~~~~-~~f~v~~G~ 211 (315)
T 3na8_A 196 KLRLLGE-GRVPFYNGC 211 (315)
T ss_dssp HHHHHTT-TCSCEEECC
T ss_pred HHHHHcC-CCEEEEeCc
Confidence 6655432 356666554
No 333
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=34.98 E-value=2e+02 Score=26.86 Aligned_cols=157 Identities=12% Similarity=0.143 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccCCchhhH-HHHH-HHHHhC-C--CcEEEEeC-CCCCCHHHHHHHHH-HhhhCC-
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGRNITADF-DVLQ-AIHAVH-P--HCSFILDA-NEGYTSEEAVEVLG-KLNDMG- 274 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~-~~l~-~ir~~~-~--~~~L~vDA-N~~~s~~~A~~~l~-~L~~~~- 274 (427)
.+.+++.+.++..++.|++.|-.=-.-.-++.+ +.++ .+++.+ + ++.+.-.. +..++++...+.++ .|+.++
T Consensus 62 ~d~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~~~~~~~~~~~~e~SL~rL~~ 141 (314)
T 3b3d_A 62 EEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGL 141 (314)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCCCcccccccccCcCCCCCHHHHHHHHHHHHHHhCC
Confidence 456777888888899999987654321112222 1222 223322 2 23332222 23445655544332 244333
Q ss_pred --CCCceEeCCCCCC---ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcE--EEeCCCCccHHHHHHHH
Q 014285 275 --VIPVLFEQPVHRD---DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASV--VNIKLAKFGVLGTLQII 347 (427)
Q Consensus 275 --l~~~~iEqP~~~~---d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~--i~lk~~~~Gi~~~~~~~ 347 (427)
+.++++--|.+.. .|+.|.+|.+ .+.==+.|=|.++...++++++...+.. .|+.....- .-.+++
T Consensus 142 dyiDL~~~H~~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~~~--~~~~ll 214 (314)
T 3b3d_A 142 DYLDLYLIHWPVEGKYKEAWRALETLYK-----EGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRL--TQKELI 214 (314)
T ss_dssp SCEEEEEESSCCTTTHHHHHHHHHHHHH-----TTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBTTB--CCHHHH
T ss_pred CcccccccccccccchhHHHHHHHHHHH-----CCCEeEEEecCCchHHHHHHHHhcCCCeEEEEecccccc--chHHHH
Confidence 2223455554432 3445555543 3443456667789999888886544332 232221111 124678
Q ss_pred HHHHHcCCcEEEcccCchh
Q 014285 348 KATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 348 ~~A~~~gi~~~~~s~~es~ 366 (427)
..|+++||.++.-+.+.+|
T Consensus 215 ~~c~~~gI~v~a~sPL~~G 233 (314)
T 3b3d_A 215 RYCQNQGIQMEAWSPLMQG 233 (314)
T ss_dssp HHHHHHTCEEEEESTTGGG
T ss_pred HHHHHcCCEEEEeccccCC
Confidence 8999999999988877554
No 334
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=34.70 E-value=1.8e+02 Score=25.97 Aligned_cols=91 Identities=16% Similarity=0.138 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHhhhCCCCCceEeCCCCCCCh-hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW-SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~-~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
+.+++.+.++++-+.|+. ++|=..+..+. +.++++++. ...+-+..|- +.+..+++.+++.+ .|++..-
T Consensus 36 ~~~~~~~~~~al~~gGv~--~iel~~k~~~~~~~i~~l~~~---~~~~~igagt-vl~~d~~~~A~~aG-Ad~v~~p--- 105 (225)
T 1mxs_A 36 REEDILPLADALAAGGIR--TLEVTLRSQHGLKAIQVLREQ---RPELCVGAGT-VLDRSMFAAVEAAG-AQFVVTP--- 105 (225)
T ss_dssp CGGGHHHHHHHHHHTTCC--EEEEESSSTHHHHHHHHHHHH---CTTSEEEEEC-CCSHHHHHHHHHHT-CSSEECS---
T ss_pred CHHHHHHHHHHHHHCCCC--EEEEecCCccHHHHHHHHHHh---CcccEEeeCe-EeeHHHHHHHHHCC-CCEEEeC---
Confidence 677888999999888886 88988764332 334446542 2356676674 67778888888887 5555421
Q ss_pred ccHHHHHHHHHHHHHcCCcEEEccc
Q 014285 338 FGVLGTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 338 ~Gi~~~~~~~~~A~~~gi~~~~~s~ 362 (427)
+. -..+++.++.+|++++++..
T Consensus 106 -~~--d~~v~~~~~~~g~~~i~G~~ 127 (225)
T 1mxs_A 106 -GI--TEDILEAGVDSEIPLLPGIS 127 (225)
T ss_dssp -SC--CHHHHHHHHHCSSCEECEEC
T ss_pred -CC--CHHHHHHHHHhCCCEEEeeC
Confidence 12 25677888899999998754
No 335
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=34.44 E-value=2.5e+02 Score=26.07 Aligned_cols=22 Identities=9% Similarity=0.075 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEcc
Q 014285 340 VLGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 340 i~~~~~~~~~A~~~gi~~~~~s 361 (427)
+...++.++.+++.|+.+..+-
T Consensus 177 ~~~~~~~i~~~~~~Gi~v~~~~ 198 (348)
T 3iix_A 177 FENRLNCLLTLKELGYETGAGS 198 (348)
T ss_dssp HHHHHHHHHHHHHTTCEEEECB
T ss_pred HHHHHHHHHHHHHhCCeeccce
Confidence 6677888888888898876554
No 336
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=34.36 E-value=3.1e+02 Score=27.20 Aligned_cols=111 Identities=21% Similarity=0.302 Sum_probs=72.1
Q ss_pred HHHHHHHhhcCCcEEEEecc-CCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE-------
Q 014285 209 SELASKYCKLGFSTLKLNVG-RNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF------- 280 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG-~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i------- 280 (427)
.+.++.+.+.|...+=+-.. .+++.-++.++.+++..|++.+. +.+.-+.+.|.+.++ .+.. .|
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi--~G~v~t~~~a~~~~~----~Gad--~I~vg~g~g 306 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLI--AGNIATAEGARALYD----AGVD--VVKVGIGPG 306 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEE--EEEECSHHHHHHHHH----TTCS--EEEECSSCC
T ss_pred HHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEe--CCCccCHHHHHHHHH----cCCC--EEEECccCC
Confidence 45566777888888776642 24555677888888877776666 333346666554443 3332 22
Q ss_pred -----------eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 281 -----------EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 281 -----------EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
+-| +.+.+.+++..+ ...++||..|=-+.+..|+.+++..+ ++.+++
T Consensus 307 ~~~~tr~~~~~~~p----~~~~l~~~~~~~-~~~~ipvia~GGi~~~~di~kal~~G-A~~v~v 364 (491)
T 1zfj_A 307 SICTTRVVAGVGVP----QVTAIYDAAAVA-REYGKTIIADGGIKYSGDIVKALAAG-GNAVML 364 (491)
T ss_dssp TTBCHHHHTCCCCC----HHHHHHHHHHHH-HHTTCEEEEESCCCSHHHHHHHHHTT-CSEEEE
T ss_pred cceEEeeecCCCCC----cHHHHHHHHHHH-hhcCCCEEeeCCCCCHHHHHHHHHcC-Ccceee
Confidence 323 355566655322 13689999999999999999999876 667666
No 337
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=34.30 E-value=1.5e+02 Score=26.27 Aligned_cols=91 Identities=11% Similarity=0.111 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhhhC----CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe-cCCCCC------HHHHHHHHHcCCC
Q 014285 260 SEEAVEVLGKLNDM----GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA-DESCRS------LNDVQKVMQENLA 328 (427)
Q Consensus 260 ~~~A~~~l~~L~~~----~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~-dE~~~~------~~~~~~ll~~~a~ 328 (427)
.+++.++++.+.+. ++. .++=-|+. .+..+++ .+++||.. |=+... .-.+..+.+.+ +
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~l~~v~~----~~~~~v~aqd~~~~~~ga~tGei~~~~~~~~G-a 83 (219)
T 2h6r_A 15 GNRGLEIAKIAEKVSEESGIT-IGVAPQFV-----DLRMIVE----NVNIPVYAQHIDNINPGSHTGHILAEAIKDCG-C 83 (219)
T ss_dssp THHHHHHHHHHHHHHHHHTCC-EEEECCTT-----THHHHHH----HCCSCBEESCCCSCCSBSCTTCCCHHHHHHHT-C
T ss_pred HHHHHHHHHHHHhcccccCCc-EEEECCHH-----HHHHHHH----HcCCcEEEEECChhhcCCccCchHHHHHHHcC-C
Confidence 47777777776432 232 24444443 3455543 35789876 411111 01144555554 8
Q ss_pred cEEEeCCC--CccHHHHHHHHHHHHHcCCcEEEcc
Q 014285 329 SVVNIKLA--KFGVLGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 329 ~~i~lk~~--~~Gi~~~~~~~~~A~~~gi~~~~~s 361 (427)
|++.+..+ +.-..+..+.++.|+++|+.+++-.
T Consensus 84 d~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v 118 (219)
T 2h6r_A 84 KGTLINHSEKRMLLADIEAVINKCKNLGLETIVCT 118 (219)
T ss_dssp CEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEe
Confidence 88888554 3346667888999999999887654
No 338
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=34.24 E-value=3.2e+02 Score=26.26 Aligned_cols=164 Identities=13% Similarity=0.103 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQP 283 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP 283 (427)
+.++..+.++.+.+.|+..|-+-.-...+.|.+.++++++..++.++..=+ .-+.++..+.++.+...+....-+=-+
T Consensus 32 ~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~--r~~~~di~~a~~al~~ag~~~v~if~~ 109 (370)
T 3rmj_A 32 TKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLS--RAIERDIRQAGEAVAPAPKKRIHTFIA 109 (370)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSSSEEEEEE--ESSHHHHHHHHHHHTTSSSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCCCeEEEEe--cCCHHHHHHHHHHHhhCCCCEEEEEec
Confidence 678888889999889999877643222357889999988866666553211 113455444555554444321111112
Q ss_pred CCC---------C---ChhhHHHHHHhhccccCCeE---EecCCCCCHHHH----HHHHHcCCCcEEEe-CCCCcc-HHH
Q 014285 284 VHR---------D---DWSGLHDVSNFARDTYGISV---VADESCRSLNDV----QKVMQENLASVVNI-KLAKFG-VLG 342 (427)
Q Consensus 284 ~~~---------~---d~~~~~~L~~~~r~~~~iPI---a~dE~~~~~~~~----~~ll~~~a~~~i~l-k~~~~G-i~~ 342 (427)
... . .++...+..+.+++ .+..+ +-|++-.++..+ +.+.+.+ ++.|.+ |..-.+ ...
T Consensus 110 ~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~-~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~G-a~~i~l~DT~G~~~P~~ 187 (370)
T 3rmj_A 110 TSPIHMEYKLKMKPKQVIEAAVKAVKIARE-YTDDVEFSCEDALRSEIDFLAEICGAVIEAG-ATTINIPDTVGYSIPYK 187 (370)
T ss_dssp CSHHHHHHTTCCCHHHHHHHHHHHHHHHTT-TCSCEEEEEETGGGSCHHHHHHHHHHHHHHT-CCEEEEECSSSCCCHHH
T ss_pred CcHHHHHHHhCCCHHHHHHHHHHHHHHHHH-cCCEEEEecCCCCccCHHHHHHHHHHHHHcC-CCEEEecCccCCcCHHH
Confidence 210 0 11222223333332 33333 224455665544 4455665 555555 543344 556
Q ss_pred HHHHHHHHHH-cC----CcEEEcccCchhHHHHH
Q 014285 343 TLQIIKATRK-SG----LHLMIDGMIETRLATGF 371 (427)
Q Consensus 343 ~~~~~~~A~~-~g----i~~~~~s~~es~ig~~a 371 (427)
..++++..++ .+ +++-+|+-...|++.+.
T Consensus 188 ~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN 221 (370)
T 3rmj_A 188 TEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVAN 221 (370)
T ss_dssp HHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHH
T ss_pred HHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHH
Confidence 6666665444 33 77888886666665553
No 339
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=34.04 E-value=3e+02 Score=25.88 Aligned_cols=164 Identities=14% Similarity=0.000 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQP 283 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP 283 (427)
+.++..+.++++.+.|+..|-+-.-..-+.|.+.++++++..++.++.+=+. -+.++....++.|...+....-+=-+
T Consensus 26 ~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r--~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 26 NTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPTICALTR--AKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCSSEEEEECC--SCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCCCEEEEeec--CCHHHHHHHHHhhcccCCCEEEEEec
Confidence 4567778888888899998776432223568888999998777777654431 12444444445544433210011111
Q ss_pred C------------CCCChhhHHHHHHhhccccCCeEEe---cCCCCCHHHH----HHHHHcCCCcEEEeCCCC-cc-HHH
Q 014285 284 V------------HRDDWSGLHDVSNFARDTYGISVVA---DESCRSLNDV----QKVMQENLASVVNIKLAK-FG-VLG 342 (427)
Q Consensus 284 ~------------~~~d~~~~~~L~~~~r~~~~iPIa~---dE~~~~~~~~----~~ll~~~a~~~i~lk~~~-~G-i~~ 342 (427)
. ..+.++.+.+..+.++ ..+..+.. |+.-.++..+ +.+.+.+ ++.|.++=+. .+ ...
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~-~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G-~~~i~l~DT~G~~~P~~ 181 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAK-KVVHEVEFFCEDAGRADQAFLARMVEAVIEAG-ADVVNIPDTTGYMLPWQ 181 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHH-TTSSEEEEEEETGGGSCHHHHHHHHHHHHHHT-CSEEECCBSSSCCCHHH
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHH-HCCCEEEEEccccccchHHHHHHHHHHHHhcC-CCEEEecCccCCcCHHH
Confidence 1 1112233333332222 34555533 3455665544 4445554 6677765443 34 556
Q ss_pred HHHHHHHHHH-cC----CcEEEcccCchhHHHHH
Q 014285 343 TLQIIKATRK-SG----LHLMIDGMIETRLATGF 371 (427)
Q Consensus 343 ~~~~~~~A~~-~g----i~~~~~s~~es~ig~~a 371 (427)
..++++..++ .+ +++-+|+-...+++.+.
T Consensus 182 v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN 215 (325)
T 3eeg_A 182 YGERIKYLMDNVSNIDKAILSAHCHNDLGLATAN 215 (325)
T ss_dssp HHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHH
T ss_pred HHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHH
Confidence 6677665544 44 78888886666665554
No 340
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=34.01 E-value=2.5e+02 Score=28.23 Aligned_cols=95 Identities=15% Similarity=0.272 Sum_probs=57.5
Q ss_pred HHHHHHhhhCCCCCceEeCCCCCCC----hhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC--C
Q 014285 264 VEVLGKLNDMGVIPVLFEQPVHRDD----WSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKL--A 336 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~~~~d----~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~--~ 336 (427)
.+.++.+.+.+.. .||=-...++ ++.++++++ .+ ++||..+ ++.+..+++.+.+.+ +|+|.+-. .
T Consensus 257 ~~~a~~~~~aG~d--~v~i~~~~G~~~~~~~~i~~i~~----~~~~~pvi~~-~v~t~~~a~~l~~aG-ad~I~vg~~~G 328 (514)
T 1jcn_A 257 KYRLDLLTQAGVD--VIVLDSSQGNSVYQIAMVHYIKQ----KYPHLQVIGG-NVVTAAQAKNLIDAG-VDGLRVGMGCG 328 (514)
T ss_dssp HHHHHHHHHTTCS--EEEECCSCCCSHHHHHHHHHHHH----HCTTCEEEEE-EECSHHHHHHHHHHT-CSEEEECSSCS
T ss_pred HHHHHHHHHcCCC--EEEeeccCCcchhHHHHHHHHHH----hCCCCceEec-ccchHHHHHHHHHcC-CCEEEECCCCC
Confidence 4455555555653 6664333332 234555543 45 7899865 357888888888876 78887721 1
Q ss_pred C---------cc---HHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 337 K---------FG---VLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 337 ~---------~G---i~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
- .| .+....+.+++++.+++++..+-+.++
T Consensus 329 ~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~ 370 (514)
T 1jcn_A 329 SICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTV 370 (514)
T ss_dssp CCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSH
T ss_pred cccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCH
Confidence 0 24 233455666777789999987766443
No 341
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=33.84 E-value=3.1e+02 Score=25.84 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHhhcC--CcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE-
Q 014285 205 PAEASELASKYCKLG--FSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF- 280 (427)
Q Consensus 205 ~~~~~~~~~~~~~~G--f~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i- 280 (427)
++++ +.++.+.+.| +..+-+..+. ++....+.++.+|+..++..+... ...++++|.+..+. +..-..+
T Consensus 105 ~~~~-~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G--~v~s~e~A~~a~~a----Gad~Ivvs 177 (336)
T 1ypf_A 105 EDEY-EFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAG--NVGTPEAVRELENA----GADATKVG 177 (336)
T ss_dssp HHHH-HHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEE--EECSHHHHHHHHHH----TCSEEEEC
T ss_pred HHHH-HHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEEC--CcCCHHHHHHHHHc----CCCEEEEe
Confidence 4433 4567777888 8888776532 556678889999998766555532 13567777665543 2210122
Q ss_pred --------eCCC-----CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCC
Q 014285 281 --------EQPV-----HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAK 337 (427)
Q Consensus 281 --------EqP~-----~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~ 337 (427)
-.|. +..+++.+.++++ ..++||..+=-+.+..|+.+++..+ ++.+++--..
T Consensus 178 ~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~----~~~ipVIa~GGI~~g~Dv~kalalG-AdaV~iGr~~ 242 (336)
T 1ypf_A 178 IGPGKVCITKIKTGFGTGGWQLAALRWCAK----AASKPIIADGGIRTNGDVAKSIRFG-ATMVMIGSLF 242 (336)
T ss_dssp SSCSTTCHHHHHHSCSSTTCHHHHHHHHHH----TCSSCEEEESCCCSTHHHHHHHHTT-CSEEEESGGG
T ss_pred cCCCceeecccccCcCCchhHHHHHHHHHH----HcCCcEEEeCCCCCHHHHHHHHHcC-CCEEEeChhh
Confidence 0000 0003556666664 4689999999999999999999876 6787774433
No 342
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=33.73 E-value=2.9e+02 Score=25.57 Aligned_cols=149 Identities=11% Similarity=0.145 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHH-hCC-CcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHA-VHP-HCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~-~~~-~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
|.+.+.+.++.+++.|-+.+=+--.. +.++=.+.++.+.+ ..+ .+.+.+ .-++-+.+++++..+..++.|.
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia-Gvg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA-GAGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE-ECCCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE-eCCCCCHHHHHHHHHHHHHcCC
Confidence 56777888999999998887543321 23444556777777 456 788888 4466789999999999998876
Q ss_pred CCceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHH
Q 014285 276 IPVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGT 343 (427)
Q Consensus 276 ~~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~ 343 (427)
.-..+=-|. ++.+ .+-++++++ .+++||.+=. .-.+.+.+.++.+. .++++-+|-+- | +...
T Consensus 105 davlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pnivgiKdss-gd~~~~ 178 (301)
T 3m5v_A 105 DGILSVAPYYNKPTQQGLYEHYKAIAQ----SVDIPVLLYNVPGRTGCEISTDTIIKLFRD-CENIYGVKEAS-GNIDKC 178 (301)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHH----HCSSCEEEEECHHHHSCCCCHHHHHHHHHH-CTTEEEEEECS-SCHHHH
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEeCchhhCcCCCHHHHHHHHhc-CCCEEEEEeCC-CCHHHH
Confidence 433344443 2222 223445554 5799998643 23456667777753 26888899874 6 7777
Q ss_pred HHHHHHHHHcCCcEEEcc
Q 014285 344 LQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~~~s 361 (427)
.++++.. .++.+..+.
T Consensus 179 ~~~~~~~--~~f~v~~G~ 194 (301)
T 3m5v_A 179 VDLLAHE--PRMMLISGE 194 (301)
T ss_dssp HHHHHHC--TTSEEEECC
T ss_pred HHHHHhC--CCeEEEEcc
Confidence 7776655 566666553
No 343
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=33.66 E-value=3e+02 Score=26.04 Aligned_cols=41 Identities=22% Similarity=0.200 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEccc---CchhHHHHHHHHHHhhcC
Q 014285 340 VLGTLQIIKATRKSGLHLMIDGM---IETRLATGFALHLAAGLG 380 (427)
Q Consensus 340 i~~~~~~~~~A~~~gi~~~~~s~---~es~ig~~a~~hlaaal~ 380 (427)
+...++.++.|++.|+.+.++-+ .|+.--....+.++..++
T Consensus 193 ~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~ 236 (369)
T 1r30_A 193 YQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLP 236 (369)
T ss_dssp HHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHHHHHhhc
Confidence 67788888888888887654322 244333444555555554
No 344
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=33.29 E-value=1.7e+02 Score=31.07 Aligned_cols=101 Identities=8% Similarity=0.028 Sum_probs=46.8
Q ss_pred HHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEE-------eCCC-CCCHHHHHHHHHHhhhCCCCCce
Q 014285 209 SELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFIL-------DANE-GYTSEEAVEVLGKLNDMGVIPVL 279 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~v-------DAN~-~~s~~~A~~~l~~L~~~~l~~~~ 279 (427)
.+.++...+.|...|.+-... +++.=...++.+++.+..++..+ |+.. .++++.+.++++.+.+++.+...
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~ 279 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILC 279 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 334455555666665555433 22211122333344343222222 3222 25666666677666666655444
Q ss_pred EeCCCCCCChhhHHHHHHhhcccc-CCeEEe
Q 014285 280 FEQPVHRDDWSGLHDVSNFARDTY-GISVVA 309 (427)
Q Consensus 280 iEqP~~~~d~~~~~~L~~~~r~~~-~iPIa~ 309 (427)
|=+-.---......++.+.+++.. ++||..
T Consensus 280 l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~ 310 (718)
T 3bg3_A 280 IKDMAGLLKPTACTMLVSSLRDRFPDLPLHI 310 (718)
T ss_dssp EECTTSCCCHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EcCcCCCcCHHHHHHHHHHHHHhCCCCeEEE
Confidence 544444334444444444444444 456644
No 345
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=33.13 E-value=3.3e+02 Score=26.05 Aligned_cols=122 Identities=13% Similarity=0.220 Sum_probs=68.6
Q ss_pred CchhhHHHHHHHHHhCC-CcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCCh----hhHHHHHHhhccccC
Q 014285 230 NITADFDVLQAIHAVHP-HCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDW----SGLHDVSNFARDTYG 304 (427)
Q Consensus 230 ~~~~d~~~l~~ir~~~~-~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~----~~~~~L~~~~r~~~~ 304 (427)
+.++-.+.++++++... -+-+.+-.|. .+.++.+.+.+.. .|+==...++. +.++++++ ..+
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~~-------~e~a~~l~eaGad--~I~ld~a~G~~~~~~~~i~~i~~----~~~ 145 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVNE-------IERAKLLVEAGVD--VIVLDSAHGHSLNIIRTLKEIKS----KMN 145 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTTC-------HHHHHHHHHTTCS--EEEECCSCCSBHHHHHHHHHHHH----HCC
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCCH-------HHHHHHHHHcCcC--eEEEeCCCCCcHHHHHHHHHHHH----hcC
Confidence 44555556677776431 1333343332 4456666666654 55511222232 23344443 458
Q ss_pred CeEEecCCCCCHHHHHHHHHcCCCcEEEeC--CC---------Ccc---HHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 305 ISVVADESCRSLNDVQKVMQENLASVVNIK--LA---------KFG---VLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 305 iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk--~~---------~~G---i~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
+||..+ .+.+..+.+.+++.+ +|+|.+- +. -+| ++...++.+.+++.+++++..+-+.++
T Consensus 146 ~~Vivg-~v~t~e~A~~l~~aG-aD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~ 219 (361)
T 3khj_A 146 IDVIVG-NVVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYS 219 (361)
T ss_dssp CEEEEE-EECSHHHHHHHHHTT-CSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSH
T ss_pred CcEEEc-cCCCHHHHHHHHHcC-cCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCH
Confidence 998874 357888888888775 7888761 11 112 344455666677789999987655443
No 346
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=33.08 E-value=3.1e+02 Score=25.63 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec-----cC---CchhhHHHHHH-HHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV-----GR---NITADFDVLQA-IHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDM 273 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi-----G~---~~~~d~~~l~~-ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~ 273 (427)
+.+.+.+.+++++++|-..|-+-. |. +.+++++++.- |+.+ ..++.|.||. |+++.|.+-++.
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSIDT---~~~~Va~aAl~a---- 122 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDT---RKPEVAEEALKL---- 122 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEEC---SCHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEC---CCHHHHHHHHHh----
Confidence 566678889999999999988776 31 34667776532 2222 1288999996 455555555554
Q ss_pred CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCC---C-CC--------------HHHH----HHHHHcCCCcEE
Q 014285 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADES---C-RS--------------LNDV----QKVMQENLASVV 331 (427)
Q Consensus 274 ~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~---~-~~--------------~~~~----~~ll~~~a~~~i 331 (427)
|.+ .|=+=- ....+.|..+++ +.+.|+.+==. . .+ ...+ +.+.+.+ +.=|
T Consensus 123 Ga~--iINdVs-g~~d~~m~~v~a----~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~G-i~~I 194 (294)
T 2dqw_A 123 GAH--LLNDVT-GLRDERMVALAA----RHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAG-VPQV 194 (294)
T ss_dssp TCS--EEECSS-CSCCHHHHHHHH----HHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTT-CSCE
T ss_pred CCC--EEEECC-CCCChHHHHHHH----HhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCC-CCcE
Confidence 221 222211 113457777775 57777765111 0 11 1112 3344444 3358
Q ss_pred EeCCCC-cc--HHHHHH---HHHHHHHcCCcEEEcc
Q 014285 332 NIKLAK-FG--VLGTLQ---IIKATRKSGLHLMIDG 361 (427)
Q Consensus 332 ~lk~~~-~G--i~~~~~---~~~~A~~~gi~~~~~s 361 (427)
++||.. .| ....++ -++.-++.|.++.++-
T Consensus 195 ilDPG~Gf~kt~~~n~~ll~~l~~~~~~g~Pvl~G~ 230 (294)
T 2dqw_A 195 VLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGL 230 (294)
T ss_dssp EEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECC
T ss_pred EEcCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 899964 23 333333 3333445799988865
No 347
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=33.00 E-value=3.2e+02 Score=25.76 Aligned_cols=129 Identities=14% Similarity=0.153 Sum_probs=71.9
Q ss_pred eeeeeeec-CCCHHHHHHHHHHHhhcCCcEEEEeccC-----------CchhhHHHHHHHHHhCCCcEEEEeC-CCCCCH
Q 014285 194 LSTAITIP-AVSPAEASELASKYCKLGFSTLKLNVGR-----------NITADFDVLQAIHAVHPHCSFILDA-NEGYTS 260 (427)
Q Consensus 194 ip~~~~i~-~~~~~~~~~~~~~~~~~Gf~~iKlKiG~-----------~~~~d~~~l~~ir~~~~~~~L~vDA-N~~~s~ 260 (427)
.|+...+. ..+++.+.+. +.+.|+..+-+.++. +++.-.+.++++|+.. ++.+.+-- -..+++
T Consensus 117 ~pv~~~i~~~~~~~~~~~~---~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~-~~Pv~vK~~~~~~~~ 192 (349)
T 1p0k_A 117 GLIFANLGSEATAAQAKEA---VEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV-SVPVIVKEVGFGMSK 192 (349)
T ss_dssp SCEEEEEETTCCHHHHHHH---HHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC-SSCEEEEEESSCCCH
T ss_pred ceeEEeecCCCCHHHHHHH---HHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc-CCCEEEEecCCCCCH
Confidence 44445554 3456555433 234689998888762 1112356788888754 23344321 223677
Q ss_pred HHHHHHHHHhhhCCCCCceE--------------eC--------CCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHH
Q 014285 261 EEAVEVLGKLNDMGVIPVLF--------------EQ--------PVHRDDWSGLHDVSNFARDTYGISVVADESCRSLND 318 (427)
Q Consensus 261 ~~A~~~l~~L~~~~l~~~~i--------------Eq--------P~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~ 318 (427)
++|....+ .+..-..+ .+ ......++.++++++. ...+||..+=-+.+..|
T Consensus 193 ~~a~~a~~----~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~---~~~ipvia~GGI~~~~d 265 (349)
T 1p0k_A 193 ASAGKLYE----AGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSE---FPASTMIASGGLQDALD 265 (349)
T ss_dssp HHHHHHHH----HTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHH---CTTSEEEEESSCCSHHH
T ss_pred HHHHHHHH----cCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHh---cCCCeEEEECCCCCHHH
Confidence 77654433 22210011 11 1111234455666541 13799999999999999
Q ss_pred HHHHHHcCCCcEEEeC
Q 014285 319 VQKVMQENLASVVNIK 334 (427)
Q Consensus 319 ~~~ll~~~a~~~i~lk 334 (427)
+.+++..+ +|.+++=
T Consensus 266 ~~k~l~~G-Ad~V~iG 280 (349)
T 1p0k_A 266 VAKAIALG-ASCTGMA 280 (349)
T ss_dssp HHHHHHTT-CSEEEEC
T ss_pred HHHHHHcC-CCEEEEc
Confidence 99999875 7887764
No 348
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=32.89 E-value=2.1e+02 Score=27.94 Aligned_cols=143 Identities=14% Similarity=0.177 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC---CchhhHHHHHHHHHh--CCCcEEEEeCCCCC------CHHHHHHHHHHhhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR---NITADFDVLQAIHAV--HPHCSFILDANEGY------TSEEAVEVLGKLND 272 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~---~~~~d~~~l~~ir~~--~~~~~L~vDAN~~~------s~~~A~~~l~~L~~ 272 (427)
+.++..+.++++.+.||+.+=.-+-. +.+.-.++++.+-+. --++++++|.|... +.++ +.+++.+--
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~d-l~~f~~lGi 117 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSD-LSFFAELGA 117 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCC-THHHHHHTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHH-HHHHHHcCC
Confidence 45666677888888999887666632 222233445544442 25799999999753 2122 345555543
Q ss_pred CCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCc---E---EEeCCCC-cc--HHHH
Q 014285 273 MGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLAS---V---VNIKLAK-FG--VLGT 343 (427)
Q Consensus 273 ~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~---~---i~lk~~~-~G--i~~~ 343 (427)
.+|+ +-..+. .+..++|++ +..+++|.+.=|. +..++..+++.+ ++ + -|.-|-. .| ..-.
T Consensus 118 ~gLR---LD~Gf~---~~eia~ls~---n~~glkIeLNASt-~~~~l~~l~~~~-~n~~~l~acHNFYPr~~TGLs~~~f 186 (385)
T 1x7f_A 118 DGIR---LDVGFD---GLTEAKMTN---NPYGLKIELNVSN-DIAYLENILSHQ-ANKSALIGCHNFYPQKFTGLPYDYF 186 (385)
T ss_dssp SEEE---ESSCCS---SHHHHHHTT---CTTCCEEEEETTS-CSSHHHHHTTSS-CCGGGEEEECCCBCSTTCSBCHHHH
T ss_pred CEEE---EcCCCC---HHHHHHHhc---CCCCCEEEEeCcC-CHHHHHHHHHcC-CChHHeEEeeccCCCCCCCCCHHHH
Confidence 3333 555553 456677764 3467999999887 777888887655 33 1 1223322 36 5667
Q ss_pred HHHHHHHHHcCCcEE
Q 014285 344 LQIIKATRKSGLHLM 358 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~ 358 (427)
.+.-+.-+++|++++
T Consensus 187 ~~~n~~~k~~Gi~t~ 201 (385)
T 1x7f_A 187 IRCSERFKKHGIRSA 201 (385)
T ss_dssp HHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHCCCcEE
Confidence 888888999999975
No 349
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=32.87 E-value=2.8e+02 Score=25.15 Aligned_cols=111 Identities=13% Similarity=0.071 Sum_probs=60.7
Q ss_pred HHHHHHhhcCCcEEEEec--cC-CchhhHHHHHHHHHh--CCCcEEEEeCC--C-----CCCHHHHHHHHHHhhhCCCCC
Q 014285 210 ELASKYCKLGFSTLKLNV--GR-NITADFDVLQAIHAV--HPHCSFILDAN--E-----GYTSEEAVEVLGKLNDMGVIP 277 (427)
Q Consensus 210 ~~~~~~~~~Gf~~iKlKi--G~-~~~~d~~~l~~ir~~--~~~~~L~vDAN--~-----~~s~~~A~~~l~~L~~~~l~~ 277 (427)
..+++.++.|.+.+++.+ |. +.++-++.++++++. ..++.+.+... | ..+.++-.+..+...+.+..
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD- 174 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGAD- 174 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCS-
T ss_pred HHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCC-
Confidence 345566789999999998 63 222233444555442 11333444321 1 12555544444556666654
Q ss_pred ceEeCCCCCCChhhHHHHHHhhccccCC-eE--EecCCCCCHHHHHHHH----HcCC
Q 014285 278 VLFEQPVHRDDWSGLHDVSNFARDTYGI-SV--VADESCRSLNDVQKVM----QENL 327 (427)
Q Consensus 278 ~~iEqP~~~~d~~~~~~L~~~~r~~~~i-PI--a~dE~~~~~~~~~~ll----~~~a 327 (427)
|+=-+.+ .+.+.++++++. +++ || +.|-...+..++.+.+ +.++
T Consensus 175 -~vkt~~~-~~~e~~~~~~~~----~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA 225 (263)
T 1w8s_A 175 -AMKIKYT-GDPKTFSWAVKV----AGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGA 225 (263)
T ss_dssp -EEEEECC-SSHHHHHHHHHH----TTTSCEEEECCSCCSSHHHHHHHHHHHHHTTC
T ss_pred -EEEEcCC-CCHHHHHHHHHh----CCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 7777654 467888887752 333 54 4444444666665444 6554
No 350
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=32.85 E-value=3.5e+02 Score=26.21 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=89.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC---CchhhHHHHHHHHHh--CCCcEEEEeCCCC------CCHHHHHHHHHHhhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR---NITADFDVLQAIHAV--HPHCSFILDANEG------YTSEEAVEVLGKLND 272 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~---~~~~d~~~l~~ir~~--~~~~~L~vDAN~~------~s~~~A~~~l~~L~~ 272 (427)
+.++..+.++++.+.||+.+=.-+-. +.+.-.++++.+-+. --++++++|.|.. ++.++ +.+++.+--
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~d-l~~~~~lGi 93 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDE-LEPLIELGV 93 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTB-CHHHHHHTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHH-HHHHHHcCC
Confidence 45566677888888999987666542 222234445444432 2479999999953 33333 344454433
Q ss_pred CCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCc---E---EEeCCCC-cc--HHHH
Q 014285 273 MGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLAS---V---VNIKLAK-FG--VLGT 343 (427)
Q Consensus 273 ~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~---~---i~lk~~~-~G--i~~~ 343 (427)
.+|+ +-..+ +.+..++|++ + ++|.+.=|..+..++..+++.+ ++ + -|.-|-. .| ..-.
T Consensus 94 ~glR---LD~Gf---~~~eia~ls~----n--lkIeLNASti~~~~l~~l~~~~-~n~~~l~a~HNFYPr~~TGLs~~~f 160 (372)
T 2p0o_A 94 TGLR---MDYGI---TIEQMAHASH----K--IDIGLNASTITLEEVAELKAHQ-ADFSRLEAWHNYYPRPETGIGTTFF 160 (372)
T ss_dssp CEEE---ECSSC---CHHHHHHHHT----T--SEEEEETTTCCHHHHHHHHHTT-CCGGGEEEECCCCCSTTCSBCHHHH
T ss_pred CEEE---EcCCC---CHHHHHHHhc----C--CEEEEECccCCHHHHHHHHHcC-CChHHeEEeeccCCCCCCCCCHHHH
Confidence 3333 55555 3567788864 3 8999999988999999998765 33 1 1223332 36 5667
Q ss_pred HHHHHHHHHcCCcEE
Q 014285 344 LQIIKATRKSGLHLM 358 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~ 358 (427)
.+.-+.-+++|++++
T Consensus 161 ~~~n~~~k~~Gi~t~ 175 (372)
T 2p0o_A 161 NEKNRWLKELGLQVF 175 (372)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCcEE
Confidence 888888999999975
No 351
>2a1i_A DNA excision repair protein ERCC-1; XPF, central domain, DNA repair, endonuclease, DNA binding protein; HET: DNA; 1.90A {Homo sapiens} SCOP: c.52.1.20 PDB: 2jnw_A* 2jpd_A*
Probab=32.05 E-value=2e+02 Score=24.04 Aligned_cols=67 Identities=18% Similarity=0.235 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHh--CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAV--HPHCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~--~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
.|+...++++++. ..|+.-=+=+=.|.++-.+.|+.+-+. ..++.|++ +||.+||.++++.+..++-
T Consensus 68 ~PeYI~~Ri~~L~-~~y~lrVLL~~VDv~d~~~~L~eL~~~c~~~~~TLiL----awS~eEaa~Yle~~k~~e~ 136 (146)
T 2a1i_A 68 HPDYIHGRLQSLG-KNFALRVLLVQVDVKDPQQALKELAKMCILADCTLIL----AWSPEEAGRYLETYKAYEQ 136 (146)
T ss_dssp STTHHHHHHHHHT-TSSSEEEEEEECCSSSCHHHHHHHHHHHHHHTCEEEE----ESSHHHHHHHHHHHHTCCS
T ss_pred CHHHHHHHHHHhc-cccceEEEEEEEeCCChHHHHHHHHHHHHHcCCEEEE----ECCHHHHHHHHHHHHHhcc
Confidence 4666777777763 355421111224555555666666652 46888888 8999999999999998763
No 352
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=32.03 E-value=2.9e+02 Score=25.03 Aligned_cols=121 Identities=17% Similarity=0.107 Sum_probs=71.1
Q ss_pred cCCCHHHHHHHHHHHhhc-CCcEEEEeccCC----chhhHHHHHHHHHh-CCCcEEE-EeCCCCCCHHHHHHHHHHhhhC
Q 014285 201 PAVSPAEASELASKYCKL-GFSTLKLNVGRN----ITADFDVLQAIHAV-HPHCSFI-LDANEGYTSEEAVEVLGKLNDM 273 (427)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~-Gf~~iKlKiG~~----~~~d~~~l~~ir~~-~~~~~L~-vDAN~~~s~~~A~~~l~~L~~~ 273 (427)
+..++++....++...+. |-..+|+.+-.| +++..+.++++|+. ++++.+. +.++ +.+++.+..+ .
T Consensus 74 ~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~---~~~~a~~~~~----~ 146 (264)
T 1xm3_A 74 GASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSD---DVVLARKLEE----L 146 (264)
T ss_dssp TCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECS---CHHHHHHHHH----H
T ss_pred ccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCC---CHHHHHHHHH----h
Confidence 346777755555555554 455677765433 24445677888884 5666555 4443 3555443332 2
Q ss_pred CCCCceEeC---CCC----CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC
Q 014285 274 GVIPVLFEQ---PVH----RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 274 ~l~~~~iEq---P~~----~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
+.. ||.- ++. ..+++.++++++ .+++||..+=-+.+..++.++++.+ +|.+++--
T Consensus 147 gad--~v~~~~~~~Gt~~~~~~~~~l~~i~~----~~~iPviv~gGI~t~eda~~~~~~G-AdgViVGS 208 (264)
T 1xm3_A 147 GVH--AIMPGASPIGSGQGILNPLNLSFIIE----QAKVPVIVDAGIGSPKDAAYAMELG-ADGVLLNT 208 (264)
T ss_dssp TCS--CBEECSSSTTCCCCCSCHHHHHHHHH----HCSSCBEEESCCCSHHHHHHHHHTT-CSEEEESH
T ss_pred CCC--EEEECCcccCCCCCCCCHHHHHHHHh----cCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEEcH
Confidence 322 3311 011 113556666654 5789998887788899999999876 67776543
No 353
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=31.97 E-value=2.6e+02 Score=24.38 Aligned_cols=156 Identities=10% Similarity=0.099 Sum_probs=83.7
Q ss_pred eecCCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCc
Q 014285 199 TIPAVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPV 278 (427)
Q Consensus 199 ~i~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~ 278 (427)
.+...+.++..+.+++. +.|...+|+-.-.....-.+.++++|+.+++..+.+|.+=.-.++. +++.+.+.|..
T Consensus 12 alD~~~~~~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~---~~~~~~~aGad-- 85 (218)
T 3jr2_A 12 ALDQTNLTDAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAI---LSRMAFEAGAD-- 85 (218)
T ss_dssp EECCSSHHHHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHHTCS--
T ss_pred EeCCCCHHHHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHH---HHHHHHhcCCC--
Confidence 34555778888888775 5677777654312223446789999998877778888765444544 55666666653
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCCeEEecC-CCCCHHHHHHHHHcCCCcEEEeCCCCc----c---HHHHHHHHHHH
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGISVVADE-SCRSLNDVQKVMQENLASVVNIKLAKF----G---VLGTLQIIKAT 350 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE-~~~~~~~~~~ll~~~a~~~i~lk~~~~----G---i~~~~~~~~~A 350 (427)
++==|.-..+ +.+.++.+.++ +.+++...|= ...|..+.+++.+. .+||+.+-.+.. | ....++.++..
T Consensus 86 ~i~vh~~~~~-~~~~~~~~~~~-~~g~~~~~d~l~~~T~~~~~~~~~~-g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~ 162 (218)
T 3jr2_A 86 WITVSAAAHI-ATIAACKKVAD-ELNGEIQIEIYGNWTMQDAKAWVDL-GITQAIYHRSRDAELAGIGWTTDDLDKMRQL 162 (218)
T ss_dssp EEEEETTSCH-HHHHHHHHHHH-HHTCEEEEECCSSCCHHHHHHHHHT-TCCEEEEECCHHHHHHTCCSCHHHHHHHHHH
T ss_pred EEEEecCCCH-HHHHHHHHHHH-HhCCccceeeeecCCHHHHHHHHHc-CccceeeeeccccccCCCcCCHHHHHHHHHH
Confidence 4432322211 22333322222 3455443211 12356677777665 588877644322 1 01122323333
Q ss_pred HHcCCcEEEcccC
Q 014285 351 RKSGLHLMIDGMI 363 (427)
Q Consensus 351 ~~~gi~~~~~s~~ 363 (427)
...++++++.+-+
T Consensus 163 ~~~~~pi~v~GGI 175 (218)
T 3jr2_A 163 SALGIELSITGGI 175 (218)
T ss_dssp HHTTCEEEEESSC
T ss_pred hCCCCCEEEECCC
Confidence 3357777776533
No 354
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=31.97 E-value=3.3e+02 Score=25.62 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=56.6
Q ss_pred HHHHHHhhhCCCCCceEeCCCCC----CChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeC--CC
Q 014285 264 VEVLGKLNDMGVIPVLFEQPVHR----DDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIK--LA 336 (427)
Q Consensus 264 ~~~l~~L~~~~l~~~~iEqP~~~----~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk--~~ 336 (427)
.+.++.+.+.+.+..|+|=-+.. ..++.++++++ .+ .+||..+ .+.+.++.+.+.+.+ +|+|.+- +.
T Consensus 108 ~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~----~~~~~~vi~G-~v~s~e~A~~a~~aG-ad~Ivvs~hgG 181 (336)
T 1ypf_A 108 YEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKK----HLPESFVIAG-NVGTPEAVRELENAG-ADATKVGIGPG 181 (336)
T ss_dssp HHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHH----HCTTSEEEEE-EECSHHHHHHHHHHT-CSEEEECSSCS
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCEEEEC-CcCCHHHHHHHHHcC-CCEEEEecCCC
Confidence 34455555554212355521111 12445555654 45 4677655 567888999998886 7888772 11
Q ss_pred Cc--c-------HH--HHHHHHHHHHHcCCcEEEcccCchhHHHHH
Q 014285 337 KF--G-------VL--GTLQIIKATRKSGLHLMIDGMIETRLATGF 371 (427)
Q Consensus 337 ~~--G-------i~--~~~~~~~~A~~~gi~~~~~s~~es~ig~~a 371 (427)
.. + .. ....+.+++++.+++++..+-+-++--...
T Consensus 182 ~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~k 227 (336)
T 1ypf_A 182 KVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAK 227 (336)
T ss_dssp TTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHH
T ss_pred ceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHH
Confidence 10 1 00 244456666777999999776655443333
No 355
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=31.82 E-value=2.5e+02 Score=25.81 Aligned_cols=14 Identities=7% Similarity=0.437 Sum_probs=7.3
Q ss_pred HHHHHHHHHHcCCc
Q 014285 343 TLQIIKATRKSGLH 356 (427)
Q Consensus 343 ~~~~~~~A~~~gi~ 356 (427)
+.+.++.|.++|++
T Consensus 149 l~~~~~~a~~~Gi~ 162 (271)
T 2yci_X 149 AMELVANADAHGIP 162 (271)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCC
Confidence 44455555555554
No 356
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=31.20 E-value=1.9e+02 Score=26.87 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEecc----C---CchhhHHHHHHHHHhCCCcEEEEeCCCC-CCHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVG----R---NITADFDVLQAIHAVHPHCSFILDANEG-YTSEE 262 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG----~---~~~~d~~~l~~ir~~~~~~~L~vDAN~~-~s~~~ 262 (427)
+|+|+.+.+.+..++|-..+-+.+- . |++.=.+.+++||+..||+-+-+-..++ +++++
T Consensus 32 TpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~ee 98 (284)
T 3chv_A 32 TVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQA 98 (284)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGG
T ss_pred CHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHH
Confidence 7899999999999999999998873 2 3333455678899888899888887543 34443
No 357
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=31.17 E-value=3.2e+02 Score=25.27 Aligned_cols=161 Identities=17% Similarity=0.171 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEE--EEeCCCCCCHHHHHHHHHHhhhCCCCCceEe
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSF--ILDANEGYTSEEAVEVLGKLNDMGVIPVLFE 281 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L--~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iE 281 (427)
+.++..+.++.+.+.|++.|-+-.....+.|.+.++++++..++.++ .+.++ .++....++.+.+.+....-+=
T Consensus 25 ~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~~~~----~~di~~a~~~~~~ag~~~v~i~ 100 (293)
T 3ewb_X 25 DVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLARCV----EGDIDRAEEALKDAVSPQIHIF 100 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEEESS----HHHHHHHHHHHTTCSSEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEecCC----HHHHHHHHHHHhhcCCCEEEEE
Confidence 57888888999999999988765433335688889999887666555 33433 3333344444444433201111
Q ss_pred CCCCC------------CChhhHHHHHHhhccccCCeEEe---cCCCCCHHHH----HHHHHcCCCcEEEe-CCCCcc-H
Q 014285 282 QPVHR------------DDWSGLHDVSNFARDTYGISVVA---DESCRSLNDV----QKVMQENLASVVNI-KLAKFG-V 340 (427)
Q Consensus 282 qP~~~------------~d~~~~~~L~~~~r~~~~iPIa~---dE~~~~~~~~----~~ll~~~a~~~i~l-k~~~~G-i 340 (427)
-|... +.++.+.+..+.++ +.+..+.. |+.-.++..+ +.+.+.+ ++.|.+ |..-.+ .
T Consensus 101 ~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~-~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G-~~~i~l~DT~G~~~P 178 (293)
T 3ewb_X 101 LATSDVHMEYKLKMSRAEVLASIKHHISYAR-QKFDVVQFSPEDATRSDRAFLIEAVQTAIDAG-ATVINIPDTVGYTNP 178 (293)
T ss_dssp EECSHHHHHHTTCCCHHHHHHHHHHHHHHHH-TTCSCEEEEEETGGGSCHHHHHHHHHHHHHTT-CCEEEEECSSSCCCH
T ss_pred ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHH-hCCCEEEEEeccCCCCCHHHHHHHHHHHHHcC-CCEEEecCCCCCCCH
Confidence 12210 01112233332222 23444432 3344565543 4455554 566666 443344 5
Q ss_pred HHHHHHHHHHHHc-C----CcEEEcccCchhHHHH
Q 014285 341 LGTLQIIKATRKS-G----LHLMIDGMIETRLATG 370 (427)
Q Consensus 341 ~~~~~~~~~A~~~-g----i~~~~~s~~es~ig~~ 370 (427)
....++++..++. + +++-+|+-...|.+.+
T Consensus 179 ~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~A 213 (293)
T 3ewb_X 179 TEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATA 213 (293)
T ss_dssp HHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHH
T ss_pred HHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHH
Confidence 6677777665543 3 6688887655555554
No 358
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=31.04 E-value=2.5e+02 Score=28.14 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=55.2
Q ss_pred HHHHHHHhhhCCCCCceEe----CCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeC--C
Q 014285 263 AVEVLGKLNDMGVIPVLFE----QPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIK--L 335 (427)
Q Consensus 263 A~~~l~~L~~~~l~~~~iE----qP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk--~ 335 (427)
..+.+++|.+.+.. .|+ .+-....++..+++++ .. ++||..+ .+.+..+.+.+++.+ +|+|.+- +
T Consensus 230 ~~~~a~~l~~aG~d--~I~id~a~g~~~~~~~~v~~i~~----~~p~~~Vi~g-~v~t~e~a~~l~~aG-aD~I~vg~g~ 301 (490)
T 4avf_A 230 TGERVAALVAAGVD--VVVVDTAHGHSKGVIERVRWVKQ----TFPDVQVIGG-NIATAEAAKALAEAG-ADAVKVGIGP 301 (490)
T ss_dssp HHHHHHHHHHTTCS--EEEEECSCCSBHHHHHHHHHHHH----HCTTSEEEEE-EECSHHHHHHHHHTT-CSEEEECSSC
T ss_pred hHHHHHHHhhcccc--eEEecccCCcchhHHHHHHHHHH----HCCCceEEEe-eeCcHHHHHHHHHcC-CCEEEECCCC
Confidence 34555566555553 454 2222222344555553 44 6788774 467888888888875 7888761 1
Q ss_pred -CC--------cc---HHHHHHHHHHHHHcCCcEEEcccCch
Q 014285 336 -AK--------FG---VLGTLQIIKATRKSGLHLMIDGMIET 365 (427)
Q Consensus 336 -~~--------~G---i~~~~~~~~~A~~~gi~~~~~s~~es 365 (427)
+. +| ++...++++.+++.+++++..+-+.+
T Consensus 302 Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~ 343 (490)
T 4avf_A 302 GSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRF 343 (490)
T ss_dssp STTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCS
T ss_pred CcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCC
Confidence 11 12 33445666666677999998765544
No 359
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=30.87 E-value=2.4e+02 Score=26.70 Aligned_cols=101 Identities=14% Similarity=0.195 Sum_probs=63.4
Q ss_pred CCCCCHHHHHHHHHHhhhCCCCCceEeCCC--CCCC----------hhhHHHHHHhhccccCCeEEe--cCCCCCHHHHH
Q 014285 255 NEGYTSEEAVEVLGKLNDMGVIPVLFEQPV--HRDD----------WSGLHDVSNFARDTYGISVVA--DESCRSLNDVQ 320 (427)
Q Consensus 255 N~~~s~~~A~~~l~~L~~~~l~~~~iEqP~--~~~d----------~~~~~~L~~~~r~~~~iPIa~--dE~~~~~~~~~ 320 (427)
+..++.++-++++++|++.|+. +||==. .+.. |+.++++++ ..+++++. .-.-....++.
T Consensus 18 ~~~~~~~~k~~ia~~L~~aGv~--~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~----~~~~~~~~L~r~~~~~~~dv~ 91 (320)
T 3dxi_A 18 NWDFNSKIVDAYILAMNELPID--YLEVGYRNKPSKEYMGKFGYTPVSVLKHLRN----ISTKKIAIMLNEKNTTPEDLN 91 (320)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCC--EEEEEECCSCCSSCCCHHHHCCHHHHHHHHH----HCCSEEEEEEEGGGCCGGGHH
T ss_pred CCcCCHHHHHHHHHHHHHhCCC--EEEEecccCCccccccccccChHHHHHHHhh----ccCCeEEEEecCCCCChhhHH
Confidence 3467899999999999999985 888543 1222 677777764 23444432 11112233555
Q ss_pred HHHHc--CCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEcc
Q 014285 321 KVMQE--NLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 321 ~ll~~--~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s 361 (427)
.+... ..+|.+.+=-...-+..+.+.++.|+++|+.+...-
T Consensus 92 ~~~~a~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~~~ 134 (320)
T 3dxi_A 92 HLLLPIIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGFNV 134 (320)
T ss_dssp HHHGGGTTTCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHhhhcCCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 54322 457776553222227788899999999999987653
No 360
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=30.85 E-value=73 Score=28.42 Aligned_cols=21 Identities=14% Similarity=0.010 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHcCCcEEEccc
Q 014285 342 GTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 342 ~~~~~~~~A~~~gi~~~~~s~ 362 (427)
...+++++|+++|+.+.++..
T Consensus 114 ~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 114 LLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp GHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHcCCEEEEecC
Confidence 456778888899999888765
No 361
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=30.14 E-value=2.6e+02 Score=27.35 Aligned_cols=62 Identities=15% Similarity=0.322 Sum_probs=39.6
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC-------CC----cc---HHHHHHHHHHHHHcCCcEEEcccCch
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKL-------AK----FG---VLGTLQIIKATRKSGLHLMIDGMIET 365 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~-------~~----~G---i~~~~~~~~~A~~~gi~~~~~s~~es 365 (427)
..++||..+ .+.+..+.+.+++.+ +|+|.+-. ++ .| ++...++++.+++.+++++..+-+-+
T Consensus 182 ~~~i~Vi~g-~V~t~e~A~~a~~aG-AD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~ 257 (400)
T 3ffs_A 182 KMNIDVIVG-NVVTEEATKELIENG-ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRY 257 (400)
T ss_dssp TCCCEEEEE-EECSHHHHHHHHHTT-CSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCS
T ss_pred cCCCeEEEe-ecCCHHHHHHHHHcC-CCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCC
Confidence 457888754 457888888888775 88887721 11 12 33445555555667999998765544
No 362
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=30.14 E-value=1.4e+02 Score=28.48 Aligned_cols=36 Identities=11% Similarity=0.317 Sum_probs=29.2
Q ss_pred CCCcEEEeCCCCcc--H------HHHHHHHHHHHHcCCcEEEcc
Q 014285 326 NLASVVNIKLAKFG--V------LGTLQIIKATRKSGLHLMIDG 361 (427)
Q Consensus 326 ~a~~~i~lk~~~~G--i------~~~~~~~~~A~~~gi~~~~~s 361 (427)
+...++.+|++-+| + ....++++.|+++|+.+++..
T Consensus 111 ~~~~~vSvKlSalg~~~~~~~~~~rl~~i~~~A~~~gv~v~IDa 154 (327)
T 2ekg_A 111 PWPKYISLXLTQLGLDLSEDLALALLREVLREAEPRGVFVRLDM 154 (327)
T ss_dssp SSCEEEEECGGGGTTTTCHHHHHHHHHHHHHHHGGGTEEEEECC
T ss_pred CCCCeEEEEcccCccccCHHHHHHHHHHHHHHHHHcCCEEEEcC
Confidence 45678999999888 2 345788999999999999964
No 363
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=29.98 E-value=25 Score=32.79 Aligned_cols=46 Identities=17% Similarity=0.105 Sum_probs=28.5
Q ss_pred ChhhHHHHHHhhccccCCeEE--ecCCCCCHHHHHHHHHcCCCcEEEeCCCCc
Q 014285 288 DWSGLHDVSNFARDTYGISVV--ADESCRSLNDVQKVMQENLASVVNIKLAKF 338 (427)
Q Consensus 288 d~~~~~~L~~~~r~~~~iPIa--~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~ 338 (427)
+++.++++++ .+++|+. .+=-+.+..++.++++.+ ++.+++=-..+
T Consensus 195 ~~~~i~~l~~----~~~~pvi~~a~GGI~~~e~i~~~~~aG-adgvvvGsai~ 242 (297)
T 2zbt_A 195 PFELVKWVHD----HGRLPVVNFAAGGIATPADAALMMHLG-MDGVFVGSGIF 242 (297)
T ss_dssp CHHHHHHHHH----HSSCSSCEEBCSSCCSHHHHHHHHHTT-CSEEEECGGGG
T ss_pred hHHHHHHHHH----hcCCCcEEEeeCCCCCHHHHHHHHHcC-CCEEEEchHHh
Confidence 4555666654 3567764 443566788888888775 66666644433
No 364
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=29.86 E-value=2.7e+02 Score=28.12 Aligned_cols=98 Identities=16% Similarity=0.345 Sum_probs=56.8
Q ss_pred HHHHHHHhhhCCCCCceEe--CCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC--C
Q 014285 263 AVEVLGKLNDMGVIPVLFE--QPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKLA--K 337 (427)
Q Consensus 263 A~~~l~~L~~~~l~~~~iE--qP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~--~ 337 (427)
..+.++.|.+.+....++- +|-...-++..+++++ .. ++||..+. +.+..+.+.+.+.+ +|+|.+... .
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~----~~~~~~vi~g~-v~t~e~a~~~~~aG-ad~i~vg~g~gs 330 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA----KYPSLNIIAGN-VATAEATKALIEAG-ANVVKVGIGPGS 330 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH----HCTTSEEEEEE-ECSHHHHHHHHHHT-CSEEEECSSCST
T ss_pred hHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH----hCCCceEEeee-eccHHHHHHHHHhC-CCEEEECCCCcc
Confidence 3455666666665422332 2211112233444443 43 47888763 56888888888876 788775221 0
Q ss_pred ---------cc---HHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 338 ---------FG---VLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 338 ---------~G---i~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
+| ++...++.+.+++.+++++..+-+.++
T Consensus 331 i~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~ 371 (511)
T 3usb_A 331 ICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYS 371 (511)
T ss_dssp TCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSH
T ss_pred ccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCH
Confidence 11 444556777788889999987655444
No 365
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=29.40 E-value=1.9e+02 Score=26.94 Aligned_cols=109 Identities=10% Similarity=0.052 Sum_probs=67.4
Q ss_pred hHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCC
Q 014285 234 DFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESC 313 (427)
Q Consensus 234 d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~ 313 (427)
..+.++.+.+....-.+.||.+ +-++..+.+..+.+++.+++ |+.-|+..... ++. ....+-+..++.
T Consensus 100 ~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~g~~--~~d~pv~g~~~---a~~-----g~l~i~vgg~~~- 167 (317)
T 4ezb_A 100 TKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATGKGS--FVEGAVMARVP---PYA-----EKVPILVAGRRA- 167 (317)
T ss_dssp HHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTSSCE--EEEEEECSCST---TTG-----GGSEEEEESTTH-
T ss_pred HHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHcCCe--EEeccCCCCch---hhc-----CCEEEEEeCChH-
Confidence 3444555555433346889998 66788888888888887764 88888754221 111 122232333332
Q ss_pred CCHHHHHHHHHcCCCcEEEeCCC-C------------c-c-HHHHHHHHHHHHHcCCcE
Q 014285 314 RSLNDVQKVMQENLASVVNIKLA-K------------F-G-VLGTLQIIKATRKSGLHL 357 (427)
Q Consensus 314 ~~~~~~~~ll~~~a~~~i~lk~~-~------------~-G-i~~~~~~~~~A~~~gi~~ 357 (427)
..++.+++.-...++.+.+. - . + +....|...+|++.|+..
T Consensus 168 ---~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~ 223 (317)
T 4ezb_A 168 ---VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTE 223 (317)
T ss_dssp ---HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ---HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 66788888777777777641 1 1 2 333557788889988886
No 366
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=29.24 E-value=57 Score=30.98 Aligned_cols=74 Identities=14% Similarity=0.101 Sum_probs=52.2
Q ss_pred hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCCcEEEcccCchhH
Q 014285 289 WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 289 ~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
|+.|.+|.+ .+.==+.|=|..+...++++++...++++|+.-+..--..-.+++..|+++||.++..+.+.+|+
T Consensus 138 ~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~ 211 (337)
T 3v0s_A 138 MGELXXLVE-----EGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGL 211 (337)
T ss_dssp HHHHHHHHH-----TTSEEEEEEESCCHHHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEEESTTHHHH
T ss_pred HHHHHHHHH-----CCCeeEEeccCCCHHHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEEeccccCcc
Confidence 455666653 33333455577889999999988888899987766521111368899999999999998886654
No 367
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=29.16 E-value=3.3e+02 Score=24.85 Aligned_cols=121 Identities=12% Similarity=0.199 Sum_probs=58.8
Q ss_pred hHHHHHHHHHhCCCcEEEE--eCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhcccc---CCeEE
Q 014285 234 DFDVLQAIHAVHPHCSFIL--DANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTY---GISVV 308 (427)
Q Consensus 234 d~~~l~~ir~~~~~~~L~v--DAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~---~iPIa 308 (427)
-++.++++|+. .++.+.+ +.|.-+.. -..++++.+.+.|.. -.|.=-++.++.+.+.+.++ +. .++++
T Consensus 79 ~~~~v~~ir~~-~~~Pii~m~y~n~v~~~-g~~~f~~~~~~aG~d-Gviv~Dl~~ee~~~~~~~~~----~~gl~~i~li 151 (271)
T 1ujp_A 79 ALELVREVRAL-TEKPLFLMTYLNPVLAW-GPERFFGLFKQAGAT-GVILPDLPPDEDPGLVRLAQ----EIGLETVFLL 151 (271)
T ss_dssp HHHHHHHHHHH-CCSCEEEECCHHHHHHH-CHHHHHHHHHHHTCC-EEECTTCCGGGCHHHHHHHH----HHTCEEECEE
T ss_pred HHHHHHHHHhc-CCCCEEEEecCcHHHHh-hHHHHHHHHHHcCCC-EEEecCCCHHHHHHHHHHHH----HcCCceEEEe
Confidence 35678888876 4554444 44522210 114566777766653 24443344444445554443 23 35555
Q ss_pred ecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHH--------HHHHHHHHHc-CCcEEEcccCch
Q 014285 309 ADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGT--------LQIIKATRKS-GLHLMIDGMIET 365 (427)
Q Consensus 309 ~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~--------~~~~~~A~~~-gi~~~~~s~~es 365 (427)
.+. .+...++.+.+ .+..++-.- +..|.|+. .++++..++. ++++.+++-+.+
T Consensus 152 ap~--s~~eri~~ia~-~~~gfiy~v-s~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t 213 (271)
T 1ujp_A 152 APT--STDARIATVVR-HATGFVYAV-SVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSG 213 (271)
T ss_dssp CTT--CCHHHHHHHHT-TCCSCEEEE-CC------------CCHHHHHHHHTTCCSCEEEESCCCS
T ss_pred CCC--CCHHHHHHHHH-hCCCCEEEE-ecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCC
Confidence 554 23444444443 334444333 55665554 3555555554 789988875543
No 368
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=29.06 E-value=40 Score=33.00 Aligned_cols=114 Identities=14% Similarity=0.109 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHhhhCCC-----CCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 259 TSEEAVEVLGKLNDMGV-----IPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l-----~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
+++-.-.+.+.+.++++ .++.-|..+.. + +...++.+.++ +.|+.|++|.--.+...+..+... .+|+|-+
T Consensus 289 ~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~-~-~~~~~~~~~l~-~~G~~ialDdfG~g~ssl~~L~~l-~~d~iKi 364 (430)
T 3pjx_A 289 DPQALNKVFEILRAHSNLGARLTLEIGEEQLPE-Q-AVLEQLTRRLR-ELGFSLSLQRFGGRFSMIGNLARL-GLAYLKI 364 (430)
T ss_dssp CHHHHHHHHHHHHTTGGGGGGEEEEEEGGGCCC-H-HHHHHHHHHHH-HHTCEEEEEEECCCHHHHCTHHHH-CCSCEEE
T ss_pred ChHHHHHHHHHHHhcCCCCceEEEEEECccccc-c-HHHHHHHHHHH-HCCCEEEEeCCCCCchhHHHHHhC-CCCEEEE
Confidence 44333344444555442 22344555432 2 43333322222 579999999977787777555543 5999999
Q ss_pred CCCCcc-HH-------HHHHHHHHHHHcCCcEEEcccCchhHHHHHHHHHHhhcCC
Q 014285 334 KLAKFG-VL-------GTLQIIKATRKSGLHLMIDGMIETRLATGFALHLAAGLGC 381 (427)
Q Consensus 334 k~~~~G-i~-------~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~hlaaal~~ 381 (427)
|.+.+- +. -...++.+|+..|+.++..+ +|+. ..+.+...+|.
T Consensus 365 D~~~v~~~~~~~~~~~~~~~i~~~a~~l~~~viaeG-VEt~----~~~~~l~~~g~ 415 (430)
T 3pjx_A 365 DGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAER-VETE----GELSVIREMGL 415 (430)
T ss_dssp CGGGTTTTTTCHHHHHHHHHHHHHHHTTTCCEEECC-CCCH----HHHHHHHHTTC
T ss_pred CHHHHHhHhcChhhHHHHHHHHHHHHHCCCcEEEEe-cCCH----HHHHHHHHcCC
Confidence 987762 32 14677899999999999877 5764 34444445544
No 369
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=29.05 E-value=2.7e+02 Score=24.42 Aligned_cols=116 Identities=14% Similarity=0.207 Sum_probs=62.9
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccCCchhh-HHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHH--hhhCCCCCce
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGRNITAD-FDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGK--LNDMGVIPVL 279 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d-~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~--L~~~~l~~~~ 279 (427)
+++++. ++...+.|...+-+..+... .. .+.++.+++. ++.+.+..|...+.+....++.. ..++ ..
T Consensus 74 ~d~~~~---i~~~~~agad~v~vH~~~~~-~~~~~~~~~i~~~--g~~igv~~~p~t~~e~~~~~~~~~~~~d~----vl 143 (228)
T 1h1y_A 74 TNPSDY---VEPLAKAGASGFTFHIEVSR-DNWQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEAENPVEL----VL 143 (228)
T ss_dssp SCGGGG---HHHHHHHTCSEEEEEGGGCT-TTHHHHHHHHHHT--TCEEEEEECTTSCGGGGHHHHHSSSCCSE----EE
T ss_pred cCHHHH---HHHHHHcCCCEEEECCCCcc-cHHHHHHHHHHHc--CCCEEEEEeCCCCHHHHHHHHhcCCCCCE----EE
Confidence 455443 34445679999999987632 33 4556667665 45666777665544332333321 1221 12
Q ss_pred E--------eCCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 280 F--------EQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 280 i--------EqP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
+ -|.+.+..++.++++++ .. ++||..|=-+.. +.+.++++.+ +|++..=
T Consensus 144 ~~sv~pg~~g~~~~~~~l~~i~~~~~----~~~~~pi~v~GGI~~-~ni~~~~~aG-aD~vvvG 201 (228)
T 1h1y_A 144 VMTVEPGFGGQKFMPEMMEKVRALRK----KYPSLDIEVDGGLGP-STIDVAASAG-ANCIVAG 201 (228)
T ss_dssp EESSCTTCSSCCCCGGGHHHHHHHHH----HCTTSEEEEESSCST-TTHHHHHHHT-CCEEEES
T ss_pred EEeecCCCCcccCCHHHHHHHHHHHH----hcCCCCEEEECCcCH-HHHHHHHHcC-CCEEEEC
Confidence 2 23333333444555544 34 788876654433 5666666664 7877764
No 370
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=28.78 E-value=3.6e+02 Score=25.04 Aligned_cols=146 Identities=15% Similarity=0.209 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|-+.+=+--.. ..++=.+.++.+.+ ..+.+.+.+= -++-+.+++++..+..++.|..
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaG-vg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAG-AGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE-CCCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEe-CCCCCHHHHHHHHHHHHHcCCC
Confidence 66778888999999999887543321 33444556777777 4667888875 4667889999999999887754
Q ss_pred CceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|. ++.+ .+-++++++ .+++||.+=. .-.+.+.+.++. ..++++-+|-+- | +....
T Consensus 113 avlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La--~~pnIvgiKdss-gd~~~~~ 185 (304)
T 3l21_A 113 GLLVVTPYYSKPPQRGLQAHFTAVAD----ATELPMLLYDIPGRSAVPIEPDTIRALA--SHPNIVGVXDAK-ADLHSGA 185 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHT----SCSSCEEEEECHHHHSSCCCHHHHHHHH--TSTTEEEEEECS-CCHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hcCCCEEEEeCccccCCCCCHHHHHHHh--cCCCEEEEECCC-CCHHHHH
Confidence 22344444 1222 223455553 6899998753 245666777777 357899999875 6 77666
Q ss_pred HHHHHHHHcCCcEEEc
Q 014285 345 QIIKATRKSGLHLMID 360 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~ 360 (427)
+++ ...++.+..+
T Consensus 186 ~~~---~~~~f~v~~G 198 (304)
T 3l21_A 186 QIM---ADTGLAYYSG 198 (304)
T ss_dssp HHH---HHHCCEEEES
T ss_pred HHh---cCCCeEEEeC
Confidence 665 3446777655
No 371
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=28.62 E-value=4.3e+02 Score=26.61 Aligned_cols=125 Identities=17% Similarity=0.219 Sum_probs=72.6
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccCCc-------------------------------------------hhhHHHH
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGRNI-------------------------------------------TADFDVL 238 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~-------------------------------------------~~d~~~l 238 (427)
..+++.+.+.++...+.||+++-+.++... ..+.+.+
T Consensus 256 ~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i 335 (511)
T 1kbi_A 256 NSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDI 335 (511)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHH
Confidence 346777777777777789998777765210 1125567
Q ss_pred HHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEe-----C-CCCCCChhhHHHHHHhhcc---ccCCeEEe
Q 014285 239 QAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE-----Q-PVHRDDWSGLHDVSNFARD---TYGISVVA 309 (427)
Q Consensus 239 ~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iE-----q-P~~~~d~~~~~~L~~~~r~---~~~iPIa~ 309 (427)
+.||+.. ++.+.|= +.-++++|.... +.|..-..+= | -..+..++.+.++.+.+++ ...+||.+
T Consensus 336 ~~lr~~~-~~PvivK--gv~~~e~A~~a~----~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia 408 (511)
T 1kbi_A 336 EELKKKT-KLPIVIK--GVQRTEDVIKAA----EIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFV 408 (511)
T ss_dssp HHHHHHC-SSCEEEE--EECSHHHHHHHH----HTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEE
T ss_pred HHHHHHh-CCcEEEE--eCCCHHHHHHHH----HcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEE
Confidence 8888853 2222222 112466654433 3333211120 0 0112245666666654321 13799999
Q ss_pred cCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 310 DESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 310 dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
+=-+.+..|+.++|..+ +|.+++-
T Consensus 409 ~GGI~~g~Dv~kaLalG-AdaV~iG 432 (511)
T 1kbi_A 409 DGGVRRGTDVLKALCLG-AKGVGLG 432 (511)
T ss_dssp ESSCCSHHHHHHHHHHT-CSEEEEC
T ss_pred ECCCCCHHHHHHHHHcC-CCEEEEC
Confidence 99999999999999986 6877763
No 372
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=28.46 E-value=1.4e+02 Score=25.53 Aligned_cols=141 Identities=10% Similarity=0.161 Sum_probs=72.9
Q ss_pred HHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHh-CCC-cEEEEeCC---CCC--------C--HHHHHHHHHHhhhCCC
Q 014285 211 LASKYCKLGFSTLKLNVGRNITADFDVLQAIHAV-HPH-CSFILDAN---EGY--------T--SEEAVEVLGKLNDMGV 275 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~-~~~-~~L~vDAN---~~~--------s--~~~A~~~l~~L~~~~l 275 (427)
.+.+..+.|...+=.|--+ -...+.++.+++. +.+ +.+.+|.+ +.+ + ..+..++++.+...+.
T Consensus 67 ~~~~~~~~Ga~~~l~kp~~--~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~ 144 (237)
T 3cwo_X 67 MVIEAIKAGAKDFIVNTAA--VENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGA 144 (237)
T ss_dssp HHHHHHHTTCCEEEESHHH--HHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTC
T ss_pred HHHHHHHCCHHheEeCCcc--cChHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCC
Confidence 3445567888777666310 1223445556653 322 55566652 211 0 0123445555554332
Q ss_pred CCceE----eCCCCCC-ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHH
Q 014285 276 IPVLF----EQPVHRD-DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKAT 350 (427)
Q Consensus 276 ~~~~i----EqP~~~~-d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A 350 (427)
.-.++ |.+...+ +++.+++++. ...+||...=...+..++.++++.++-+++.-..-..|-....++.+..
T Consensus 145 ~~vli~~~~~~g~~~g~~~~~i~~~~~----~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~~~~~l 220 (237)
T 3cwo_X 145 GEILLTSIDRDGTKSGYDTEMIRFVRP----LTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEYL 220 (237)
T ss_dssp SEEEEEETTTTTCCSCCCHHHHHHHGG----GCCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred CeEEEEecCCCCccccccHHHHHHHHH----hcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHHHHHHH
Confidence 21133 4444322 2445566653 5689998877777889999998877544444332222322234445556
Q ss_pred HHcCCcE
Q 014285 351 RKSGLHL 357 (427)
Q Consensus 351 ~~~gi~~ 357 (427)
++.|+..
T Consensus 221 ~~~~~~~ 227 (237)
T 3cwo_X 221 KKHGVNV 227 (237)
T ss_dssp HTTTCCC
T ss_pred HHCCCce
Confidence 6677654
No 373
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=28.21 E-value=2.5e+02 Score=26.14 Aligned_cols=154 Identities=11% Similarity=0.179 Sum_probs=82.4
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEecc----C---CchhhHHHHHHHHHhCCCcEEEEeCCCC-C-CHHHHHHHHHHhhh--
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVG----R---NITADFDVLQAIHAVHPHCSFILDANEG-Y-TSEEAVEVLGKLND-- 272 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG----~---~~~~d~~~l~~ir~~~~~~~L~vDAN~~-~-s~~~A~~~l~~L~~-- 272 (427)
+|+|+.+.+.+..++|-..+-+.+- . |++.=.+.+++||+..||+-+-+-..++ + +.++=...+ .+.+
T Consensus 32 TpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~Pe~ 110 (282)
T 2y7e_A 32 TPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALKPEM 110 (282)
T ss_dssp SHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGCCSE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcCCCE
Confidence 7899999999999999998888873 2 3333455678899888899998888433 2 455533333 2221
Q ss_pred --CCCCC-ceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHH---HHHHHcCCC----cEEEeCCCCc-c--
Q 014285 273 --MGVIP-VLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDV---QKVMQENLA----SVVNIKLAKF-G-- 339 (427)
Q Consensus 273 --~~l~~-~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~---~~ll~~~a~----~~i~lk~~~~-G-- 339 (427)
+++.+ -|-|.-+ ....+...++.+.++ +.++..-. ++++..++ +.+++.+-+ -++|+=.... |
T Consensus 111 asl~~gs~Nf~~~v~-~n~~~~~~~~~~~~~-e~Gv~pE~--e~fd~g~l~~~~~l~~~Gl~p~~p~~~~~VlGv~~g~~ 186 (282)
T 2y7e_A 111 ATLNAGTLNFGDDIF-INHPADIIRLAEAFK-QYNVVPEV--EVYESGMVDAVARLIKKGIITQNPLHIQFVLGVPGGMS 186 (282)
T ss_dssp EEEECCCEEETTEEE-CCCHHHHHHHHHHHH-HTTCEEEE--EECSHHHHHHHHHHHHTTSCCCSSCEEEEEECCTTSCC
T ss_pred EEecccccccccccc-cCCHHHHHHHHHHHH-HcCCeEEE--EEECHHHHHHHHHHHHcCCCCCCCeEEEEEEecCCCCC
Confidence 00000 0111011 122333444433322 34554433 56776665 455566544 4555433322 2
Q ss_pred --HHHHHHHHHHHHHc--CCcEEEccc
Q 014285 340 --VLGTLQIIKATRKS--GLHLMIDGM 362 (427)
Q Consensus 340 --i~~~~~~~~~A~~~--gi~~~~~s~ 362 (427)
....+.+.+..-.. +..|.+.+.
T Consensus 187 ~~~~~L~~~~~~lp~~~~~~~wsv~g~ 213 (282)
T 2y7e_A 187 GKPKNLMYMMEHLKEEIPTATWAVAGI 213 (282)
T ss_dssp CCHHHHHHHHHHHHHHSTTCEEEEEEC
T ss_pred CCHHHHHHHHHhcccccCCCeEEEEec
Confidence 33344444443321 677777654
No 374
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=27.34 E-value=3.9e+02 Score=24.98 Aligned_cols=114 Identities=14% Similarity=0.194 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------Cchhh----HHHHHHHHHhCCCcEEEEe-CCCCCCHHHHHHHHHHhhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITAD----FDVLQAIHAVHPHCSFILD-ANEGYTSEEAVEVLGKLND 272 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d----~~~l~~ir~~~~~~~L~vD-AN~~~s~~~A~~~l~~L~~ 272 (427)
+++.+.+.++.. |+..+.+.+.. +.+.+ .+.+++||+ . ++.+.|- ...++++++|. .+.+
T Consensus 133 ~~~~~~~a~~~~---~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~-~-~~Pv~vK~v~~g~~~e~a~----~~~~ 203 (332)
T 1vcf_A 133 GRDDLLRLVEML---EADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP-L-PFPVMVKEVGHGLSREAAL----ALRD 203 (332)
T ss_dssp CHHHHHHHHHHH---TCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS-C-SSCEEEECSSSCCCHHHHH----HHTT
T ss_pred ChHHHHHHHhhc---CCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc-C-CCCEEEEecCCCCCHHHHH----HHHH
Q ss_pred CCCCCceE----------------eC----------CCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHc
Q 014285 273 MGVIPVLF----------------EQ----------PVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQE 325 (427)
Q Consensus 273 ~~l~~~~i----------------Eq----------P~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~ 325 (427)
.++. +| -+ ......++.+.++.+ .. ++||.++=-+.+..|+.+++..
T Consensus 204 ~G~d--~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~----~~~~ipvia~GGI~~~~d~~kal~~ 277 (332)
T 1vcf_A 204 LPLA--AVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVRE----VLPHLPLVASGGVYTGTDGAKALAL 277 (332)
T ss_dssp SCCS--EEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHH----HCSSSCEEEESSCCSHHHHHHHHHH
T ss_pred cCCC--EEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHH----hcCCCeEEEECCCCCHHHHHHHHHh
Q ss_pred CCCcEEEe
Q 014285 326 NLASVVNI 333 (427)
Q Consensus 326 ~a~~~i~l 333 (427)
+ +|.+++
T Consensus 278 G-Ad~V~i 284 (332)
T 1vcf_A 278 G-ADLLAV 284 (332)
T ss_dssp T-CSEEEE
T ss_pred C-CChHhh
No 375
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=27.09 E-value=3.2e+02 Score=24.62 Aligned_cols=73 Identities=14% Similarity=0.073 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHhhh-CCCCCceEeCCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 259 TSEEAVEVLGKLND-MGVIPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 259 s~~~A~~~l~~L~~-~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
+++++..++..-++ ++....|+|-.=...+.+-++++++ .+ .+|++.+=-+.+.++++++.+ .+|.+++--.
T Consensus 143 ~~e~iaa~A~~a~~~~g~~~vY~e~sG~~g~~~~v~~ir~----~~~~~pv~vGfGI~~~e~a~~~~~--gAD~VVVGSa 216 (235)
T 3w01_A 143 TTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSE----HLTETQLFYGGGISSEQQATEMAA--IADTIIVGDI 216 (235)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHT----TCSSSEEEEESCCCSHHHHHHHHT--TSSEEEECTH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEecCCCcCCHHHHHHHHH----hcCCCCEEEECCcCCHHHHHHHHc--CCCEEEECCc
Confidence 57777777553222 2444468998434556666676654 56 899999999999999998876 4888876543
Q ss_pred C
Q 014285 337 K 337 (427)
Q Consensus 337 ~ 337 (427)
.
T Consensus 217 i 217 (235)
T 3w01_A 217 I 217 (235)
T ss_dssp H
T ss_pred e
Confidence 3
No 376
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=27.05 E-value=3.1e+02 Score=26.44 Aligned_cols=63 Identities=14% Similarity=0.332 Sum_probs=38.4
Q ss_pred cc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC-----------CCcc---HHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 302 TY-GISVVADESCRSLNDVQKVMQENLASVVNIKL-----------AKFG---VLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 302 ~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~-----------~~~G---i~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
.+ ++||..+ .+.+..+++.+.+.+ +|+|.+-. .-+| +....++.+.+...+++++..+-+.++
T Consensus 191 ~~~~~pviv~-~v~~~~~a~~a~~~G-ad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~ 268 (404)
T 1eep_A 191 KYPNLDLIAG-NIVTKEAALDLISVG-ADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFS 268 (404)
T ss_dssp HCTTCEEEEE-EECSHHHHHHHHTTT-CSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSH
T ss_pred HCCCCeEEEc-CCCcHHHHHHHHhcC-CCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCH
Confidence 45 7888863 356777887777664 89988810 1122 222334444444578999987666544
No 377
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=27.00 E-value=3.8e+02 Score=24.78 Aligned_cols=88 Identities=16% Similarity=0.105 Sum_probs=59.7
Q ss_pred hhcCCcEEEEec-------cC------CchhhHHHHHHHHHhCCCcEEEEeCCC-CC-CHHHHHHHHHHhhhCCCCCceE
Q 014285 216 CKLGFSTLKLNV-------GR------NITADFDVLQAIHAVHPHCSFILDANE-GY-TSEEAVEVLGKLNDMGVIPVLF 280 (427)
Q Consensus 216 ~~~Gf~~iKlKi-------G~------~~~~d~~~l~~ir~~~~~~~L~vDAN~-~~-s~~~A~~~l~~L~~~~l~~~~i 280 (427)
-+.||..+=.-- |. .+++=+...++|++.-+..-+.+|.-- +| ++++|.+-+.+|.+.+..-.-|
T Consensus 46 e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVkl 125 (275)
T 3vav_A 46 DRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKF 125 (275)
T ss_dssp HHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 357999982221 11 244556677888776678889999985 68 7999998888877666554468
Q ss_pred eCCCCCCChhhHHHHHHhhccccCCeEEec
Q 014285 281 EQPVHRDDWSGLHDVSNFARDTYGISVVAD 310 (427)
Q Consensus 281 EqP~~~~d~~~~~~L~~~~r~~~~iPIa~d 310 (427)
|.=.. -.+..+.|+ +.+||++..
T Consensus 126 Edg~~--~~~~i~~l~-----~~GIpv~gH 148 (275)
T 3vav_A 126 EGGEW--LAETVRFLV-----ERAVPVCAH 148 (275)
T ss_dssp ECCGG--GHHHHHHHH-----HTTCCEEEE
T ss_pred CCchh--HHHHHHHHH-----HCCCCEEEe
Confidence 97532 234556665 368999864
No 378
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=26.83 E-value=17 Score=34.75 Aligned_cols=35 Identities=6% Similarity=-0.033 Sum_probs=30.9
Q ss_pred heeccccccceeeeccccccccccccCCcceeeEE
Q 014285 34 FCVSNVMAETTTVRTSERTSLGFKNLTETFWVDVQ 68 (427)
Q Consensus 34 ~~~~~~~~~~~~f~~~~~ts~g~~~~~~~~~~~I~ 68 (427)
.|+.++.++.+.|++|-.||+|..+.++.++++|+
T Consensus 2 ~~~i~~~~~~~pl~~p~~~s~~~~~~~~~~lV~v~ 36 (332)
T 2ozt_A 2 SLRWQWRIYEEPLQEPLTTAQGVWRSRSGIYLRLE 36 (332)
T ss_dssp CEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEeecCCCcEecCEEEEeeeEEEEEEE
Confidence 36778899999999999999999998888888886
No 379
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=26.82 E-value=90 Score=30.26 Aligned_cols=141 Identities=14% Similarity=0.137 Sum_probs=75.8
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeC
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEq 282 (427)
-+.+.+.+..+...+.||-.-=+.+- +.+.-.+.+++.++...-+-|. .++..+ ++. ...++. .++
T Consensus 12 ~~~~~~~~ll~~A~~~~yAVpAfNv~-n~e~~~Avl~AAee~~sPvIlq------~s~g~~-~~~---~g~~~~---~~~ 77 (358)
T 1dos_A 12 ITGDDVQKVFQVAKENNFALPAVNCV-GTDSINAVLETAAKVKAPVIVQ------FSNGGA-SFI---AGKGVK---SDV 77 (358)
T ss_dssp CCTHHHHHHHHHHHHTTCCEEEEECC-SHHHHHHHHHHHHHHTCCEEEE------ECHHHH-HHH---HCTTSC---CCS
T ss_pred ecchHHHHHHHHHHHCCceEEEEeeC-CHHHHHHHHHHHHHhCCCEEEE------CChhHH-HHh---cCCCcc---ccc
Confidence 45677777777777888865444442 3344445555555543323232 233322 221 111111 000
Q ss_pred CCCCCChhh---HHHHHHhhccccCCeEEecCCCC-CH--HHHHHHHHcC----------CCcEEEeCCCCcc----HHH
Q 014285 283 PVHRDDWSG---LHDVSNFARDTYGISVVADESCR-SL--NDVQKVMQEN----------LASVVNIKLAKFG----VLG 342 (427)
Q Consensus 283 P~~~~d~~~---~~~L~~~~r~~~~iPIa~dE~~~-~~--~~~~~ll~~~----------a~~~i~lk~~~~G----i~~ 342 (427)
... ..+.+ ++.+.+.+-++.++||++.=... +. ..+..+++.+ .++.+.+|.|..= +..
T Consensus 78 ~~~-~~i~ga~~~~~~v~~~A~~~~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS~~p~eENI~~ 156 (358)
T 1dos_A 78 PQG-AAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEI 156 (358)
T ss_dssp TTH-HHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHH
T ss_pred hhh-hHHHhHHHHHHHHHHHHHHCCCCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEeecCCCCCHHHHHHH
Confidence 000 00100 11111111125789999875333 32 4466666553 3899999999873 777
Q ss_pred HHHHHHHHHHcCCcEE
Q 014285 343 TLQIIKATRKSGLHLM 358 (427)
Q Consensus 343 ~~~~~~~A~~~gi~~~ 358 (427)
++++.++|++.|+.+-
T Consensus 157 Tkevv~~ah~~gvsVE 172 (358)
T 1dos_A 157 CSKYLERMSKIGMTLE 172 (358)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 9999999999999884
No 380
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=26.39 E-value=3.9e+02 Score=24.68 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=27.0
Q ss_pred CCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccC----CeEEe
Q 014285 256 EGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYG----ISVVA 309 (427)
Q Consensus 256 ~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~----iPIa~ 309 (427)
+..+++...++++++.+++.....|=+-+-........++.+.+++..+ +||..
T Consensus 145 ~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~ 202 (293)
T 3ewb_X 145 TRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFAS 202 (293)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEE
Confidence 3456666666666666666543445554443344444444333333332 55654
No 381
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=26.10 E-value=4.6e+02 Score=25.41 Aligned_cols=143 Identities=8% Similarity=0.093 Sum_probs=80.6
Q ss_pred cCCCHHHHHHHHHHHhhcCCcEEEEeccC---------Cc-hhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHh
Q 014285 201 PAVSPAEASELASKYCKLGFSTLKLNVGR---------NI-TADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKL 270 (427)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~Gf~~iKlKiG~---------~~-~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L 270 (427)
+.+|.+.+.+.++.+.+.|..++|+-.-. .+ .+.++.++.+.+. -++.+..|.....+.+.+.+ +
T Consensus 151 sves~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~-~Gl~~~te~~d~~~~~~l~~----~ 225 (385)
T 3nvt_A 151 SVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDE-YGLGVISEIVTPADIEVALD----Y 225 (385)
T ss_dssp BCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEECCSGGGHHHHTT----T
T ss_pred CcCCHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHH-cCCEEEEecCCHHHHHHHHh----h
Confidence 34688888888999999999999876521 01 2344445444432 24677777766555443222 1
Q ss_pred hhCCCCCceEeCCCC-CCChhhHHHHHHhhccccCCeEEecCCC-CCHHHHHHHH----HcCCCcEEEeCCCCc-----c
Q 014285 271 NDMGVIPVLFEQPVH-RDDWSGLHDVSNFARDTYGISVVADESC-RSLNDVQKVM----QENLASVVNIKLAKF-----G 339 (427)
Q Consensus 271 ~~~~l~~~~iEqP~~-~~d~~~~~~L~~~~r~~~~iPIa~dE~~-~~~~~~~~ll----~~~a~~~i~lk~~~~-----G 339 (427)
+. |+==|=. -.|++-+++++ +++.||-+---. .+++++..++ +.+..+++.+.-+-. +
T Consensus 226 ----vd--~lkIgs~~~~n~~LL~~~a-----~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~ 294 (385)
T 3nvt_A 226 ----VD--VIQIGARNMQNFELLKAAG-----RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKAT 294 (385)
T ss_dssp ----CS--EEEECGGGTTCHHHHHHHH-----TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS
T ss_pred ----CC--EEEECcccccCHHHHHHHH-----ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCC
Confidence 11 2222211 12344444444 588899887766 7888774443 445567777664211 1
Q ss_pred --HHHHHHHHHHHHHcCCcEEE
Q 014285 340 --VLGTLQIIKATRKSGLHLMI 359 (427)
Q Consensus 340 --i~~~~~~~~~A~~~gi~~~~ 359 (427)
-.....+..+.+..|++++.
T Consensus 295 ~~~ldl~~i~~lk~~~~lpV~~ 316 (385)
T 3nvt_A 295 RNTLDISAVPILKKETHLPVMV 316 (385)
T ss_dssp SSBCCTTHHHHHHHHBSSCEEE
T ss_pred ccccCHHHHHHHHHhcCCCEEE
Confidence 01223344555668999855
No 382
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=26.03 E-value=2.8e+02 Score=26.62 Aligned_cols=144 Identities=10% Similarity=0.054 Sum_probs=73.1
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCC-------CCCCHHHHHHHHHHhhhCCC
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDAN-------EGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN-------~~~s~~~A~~~l~~L~~~~l 275 (427)
.|.+.+.+.++...+.|-.++|+-.-.. +. +-.-.. ..+..-. . .-+ ..++.++-..+.+..++.|+
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~-~t-l~s~~~--~~fq~~~-~-~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi 105 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIV-ED-EMSDEA--KQVIPGN-A-DVSIYEIMERCALNEEDEIKLKEYVESKGM 105 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCH-HH-HCCGGG--GGCCCTT-C-SSCHHHHHHHHCCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeeccc-cc-ccCcch--hccccCC-C-CccHHHHHHHhCCCHHHHHHHHHHHHHhCC
Confidence 4778888888888899999999864210 00 000000 0000000 0 000 02333443334444455555
Q ss_pred CCceEeCCCCCCChh---------------------hHHHHHHhhccccCCeEEecCCCCCHHHHHHHH----HcCCCcE
Q 014285 276 IPVLFEQPVHRDDWS---------------------GLHDVSNFARDTYGISVVADESCRSLNDVQKVM----QENLASV 330 (427)
Q Consensus 276 ~~~~iEqP~~~~d~~---------------------~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll----~~~a~~~ 330 (427)
. |+=+|+...+.+ -+++++ +++-||.+.--..+..++..++ +.+. ++
T Consensus 106 ~--~~st~~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va-----~~gkPviLstGmat~~Ei~~Ave~i~~~G~-~i 177 (349)
T 2wqp_A 106 I--FISTLFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVA-----SFGKPIILSTGMNSIESIKKSVEIIREAGV-PY 177 (349)
T ss_dssp E--EEEEECSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHH-----TTCSCEEEECTTCCHHHHHHHHHHHHHHTC-CE
T ss_pred e--EEEeeCCHHHHHHHHhcCCCEEEECcccccCHHHHHHHH-----hcCCeEEEECCCCCHHHHHHHHHHHHHcCC-CE
Confidence 2 566665544333 333333 4788888877667888874443 2333 77
Q ss_pred EEeCCCCcc-HH-----HHHHHHHHHHHc-CCcEEEcc
Q 014285 331 VNIKLAKFG-VL-----GTLQIIKATRKS-GLHLMIDG 361 (427)
Q Consensus 331 i~lk~~~~G-i~-----~~~~~~~~A~~~-gi~~~~~s 361 (427)
+.+. +..+ -+ ....+-.+.+.+ ++++..++
T Consensus 178 iLlh-c~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sd 214 (349)
T 2wqp_A 178 ALLH-CTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSD 214 (349)
T ss_dssp EEEE-CCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEEC
T ss_pred EEEe-ccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCC
Confidence 7765 2223 22 124445556677 78886543
No 383
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=25.94 E-value=5.5e+02 Score=26.27 Aligned_cols=58 Identities=17% Similarity=0.282 Sum_probs=43.7
Q ss_pred CCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC-----------CCcc---HHHHHHHHHHHHHcCCcEEEcccC
Q 014285 304 GISVVADESCRSLNDVQKVMQENLASVVNIKL-----------AKFG---VLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 304 ~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~-----------~~~G---i~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
.+||..+ ++.+.+.++.|++.+ +|++.+-. +-+| ++...++++.|+++|++++-.+-+
T Consensus 322 ~~~viaG-NVaT~e~a~~Li~aG-AD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI 393 (556)
T 4af0_A 322 KIDVIAG-NVVTREQAAQLIAAG-ADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGI 393 (556)
T ss_dssp TSEEEEE-EECSHHHHHHHHHHT-CSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCC
T ss_pred cceEEec-cccCHHHHHHHHHcC-CCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCc
Confidence 5788877 567888889999987 67765432 1234 777889999999999999876644
No 384
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=25.92 E-value=1.8e+02 Score=26.68 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=34.0
Q ss_pred ccccCCeEEe--cCC-C--CCHHHH-HHHHHcCCCc-EEEeCCCCccHHHHHHHHHHHHHcCCcEEE
Q 014285 300 RDTYGISVVA--DES-C--RSLNDV-QKVMQENLAS-VVNIKLAKFGVLGTLQIIKATRKSGLHLMI 359 (427)
Q Consensus 300 r~~~~iPIa~--dE~-~--~~~~~~-~~ll~~~a~~-~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~ 359 (427)
|+...+||.+ ..+ + ++...+ +.+.+.+ +| ++.+|... .+..++.+.++++|+....
T Consensus 87 r~~~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG-~dGviv~Dl~~---ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 87 RALTEKPLFLMTYLNPVLAWGPERFFGLFKQAG-ATGVILPDLPP---DEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp HHHCCSCEEEECCHHHHHHHCHHHHHHHHHHHT-CCEEECTTCCG---GGCHHHHHHHHHHTCEEEC
T ss_pred HhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcC-CCEEEecCCCH---HHHHHHHHHHHHcCCceEE
Confidence 3356789877 111 1 123333 4455555 56 77777754 4566778889999987543
No 385
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=25.82 E-value=4e+02 Score=24.66 Aligned_cols=147 Identities=16% Similarity=0.254 Sum_probs=96.6
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEecc--C----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVG--R----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG--~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|.+.+=+--. - +.++=.+.++.+++ ....+.+.+=+ ++-+.+++++..+..++.|..
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV-GTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC-CCSCHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC-CCCCHHHHHHHHHHHHhcCCC
Confidence 5677888899999999888665432 1 23444556777777 45667777655 566889999999999988765
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|.- +.+ ++-++++++ .+++||.+=. .-.+.+.+.++.+ .++++-+|-+- | +....
T Consensus 114 avlv~~P~y~~~~~~~l~~~f~~ia~----a~~lPiilYn~P~~tg~~l~~~~~~~La~--~pnIvgiKdss-gd~~~~~ 186 (304)
T 3cpr_A 114 GLLVVTPYYSKPSQEGLLAHFGAIAA----ATEVPICLYDIPGRSGIPIESDTMRRLSE--LPTILAVXDAK-GDLVAAT 186 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HCCSCEEEEECHHHHSSCCCHHHHHHHTT--STTEEEEEECS-CCHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hcCCCEEEEeCccccCcCCCHHHHHHHHc--CCCEEEEecCC-CCHHHHH
Confidence 233445542 222 223344554 5789998743 2346666777764 47899999775 6 77777
Q ss_pred HHHHHHHHcCCcEEEcc
Q 014285 345 QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~s 361 (427)
++++.. ++.+..+.
T Consensus 187 ~~~~~~---~f~v~~G~ 200 (304)
T 3cpr_A 187 SLIKET---GLAWYSGD 200 (304)
T ss_dssp HHHHHH---CCEEEECS
T ss_pred HHHHhc---CEEEEECc
Confidence 766544 67665553
No 386
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.76 E-value=4.1e+02 Score=24.76 Aligned_cols=149 Identities=13% Similarity=0.199 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|...+=+-- |- ..++=.+.++.+.+ ....+.+.+ .-++-+.+++++..+..++.|..
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA-GTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHHHcCCC
Confidence 567778889999999998875532 21 33444556677776 456677877 45567899999999999987754
Q ss_pred CceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|. ++.+ .+-++++++ .+++||.+=. .-.+.+.+.++.+ .++++-+|-+- | +....
T Consensus 121 avlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La~--~pnIvgiKdss-gd~~~~~ 193 (314)
T 3qze_A 121 ACLLVTPYYNKPTQEGMYQHFRHIAE----AVAIPQILYNVPGRTSCDMLPETVERLSK--VPNIIGIKEAT-GDLQRAK 193 (314)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HSCSCEEEEECHHHHSCCCCHHHHHHHHT--STTEEEEEECS-CCHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHH----hcCCCEEEEeCccccCCCCCHHHHHHHhc--CCCEEEEEcCC-CCHHHHH
Confidence 22333443 1222 223455554 5799998753 2355666777773 57899999764 6 77666
Q ss_pred HHHHHHHHcCCcEEEcc
Q 014285 345 QIIKATRKSGLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~s 361 (427)
++++... -++.+..+.
T Consensus 194 ~~~~~~~-~~f~v~~G~ 209 (314)
T 3qze_A 194 EVIERVG-KDFLVYSGD 209 (314)
T ss_dssp HHHHHSC-TTSEEEESC
T ss_pred HHHHHcC-CCeEEEecC
Confidence 6554322 245555443
No 387
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=25.73 E-value=88 Score=29.38 Aligned_cols=83 Identities=7% Similarity=0.109 Sum_probs=54.3
Q ss_pred ceEeCCCCCC----ChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHc
Q 014285 278 VLFEQPVHRD----DWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKS 353 (427)
Q Consensus 278 ~~iEqP~~~~----d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~ 353 (427)
+++-.|-+.. .|+.|.+|.+ .+.==+.|=|-++...++++++...++++|+..+..--. ..+++..|+++
T Consensus 136 ~llH~p~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~-~e~l~~~~~~~ 209 (317)
T 1ynp_A 136 YQLHGGTIDDPIDETIEAFEELKQ-----EGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILDRR-PEEWFPLIQEH 209 (317)
T ss_dssp EEECSCCTTSCHHHHHHHHHHHHH-----HTSEEEEEEECCCHHHHHHHHHHSCCCEEEEECBTTBCG-GGGGHHHHHHT
T ss_pred EEecCCCCCCChHHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHhcCCCEEEeccCCchhCC-HHHHHHHHHHc
Confidence 3455554332 2445555543 343334555678889999999888899999877654211 11288999999
Q ss_pred CCcEEEcccCchh
Q 014285 354 GLHLMIDGMIETR 366 (427)
Q Consensus 354 gi~~~~~s~~es~ 366 (427)
||.++..+.+.+|
T Consensus 210 gI~v~a~spL~~G 222 (317)
T 1ynp_A 210 GVSVVVRGPVARG 222 (317)
T ss_dssp TCEEEEECTTGGG
T ss_pred CCeEEEecCccCc
Confidence 9999988877554
No 388
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=25.54 E-value=4.1e+02 Score=24.66 Aligned_cols=108 Identities=11% Similarity=0.085 Sum_probs=67.9
Q ss_pred HHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCC---
Q 014285 209 SELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVH--- 285 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~--- 285 (427)
.+.++...+.|...+-+..|.+ .+.++.+++. ++.+.++.+ ++++|....+. +.....++-+-.
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p----~~~~~~l~~~--gi~vi~~v~---t~~~a~~~~~~----GaD~i~v~g~~~GG~ 152 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDP----GEHIAEFRRH--GVKVIHKCT---AVRHALKAERL----GVDAVSIDGFECAGH 152 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCC----HHHHHHHHHT--TCEEEEEES---SHHHHHHHHHT----TCSEEEEECTTCSBC
T ss_pred HHHHHHHHhcCCCEEEEcCCCc----HHHHHHHHHc--CCCEEeeCC---CHHHHHHHHHc----CCCEEEEECCCCCcC
Confidence 3445566678999988887742 3556677765 466666653 56776654432 222123433211
Q ss_pred -----CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 286 -----RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 286 -----~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
..+++.++++++ ..++||.++=-+.+..++.+++..+ ++.+++-
T Consensus 153 ~G~~~~~~~~~l~~v~~----~~~iPviaaGGI~~~~~v~~al~~G-AdgV~vG 201 (328)
T 2gjl_A 153 PGEDDIPGLVLLPAAAN----RLRVPIIASGGFADGRGLVAALALG-ADAINMG 201 (328)
T ss_dssp CCSSCCCHHHHHHHHHT----TCCSCEEEESSCCSHHHHHHHHHHT-CSEEEES
T ss_pred CCCccccHHHHHHHHHH----hcCCCEEEECCCCCHHHHHHHHHcC-CCEEEEC
Confidence 124555555553 5789999988888899999988876 7777753
No 389
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=25.37 E-value=1.1e+02 Score=29.62 Aligned_cols=132 Identities=16% Similarity=0.176 Sum_probs=74.9
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeC
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ 282 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEq 282 (427)
.+.+.|.+..+...+.||-.-=+.+- +.+.-.+.+++..+...-+-|.+ ++.. .++. ...++ +
T Consensus 15 ~~~~~~~~ll~~A~~~~yAV~AfNv~-n~e~~~Avl~AAee~~sPvIlq~------s~g~-~~~~---~g~~~-----~- 77 (357)
T 3qm3_A 15 ISGDELNKIYDYAKAEGFAIPAVNVV-GTDSINAVLEAAKKVNSPVIIQF------SNGG-AKFY---AGKNC-----P- 77 (357)
T ss_dssp CCGGGHHHHHHHHHHHTCCEEEEECC-SHHHHHHHHHHHHHHTSCEEEEE------CHHH-HHHH---HCTTC-----T-
T ss_pred ccHHHHHHHHHHHHHcCceEEEEeeC-CHHHHHHHHHHHHHhCCCEEEEc------ChhH-Hhhc---cCccc-----h-
Confidence 35666777777777788865444442 33444445555555433333333 2222 2221 11111 0
Q ss_pred CCCCCChh-------hHHHHHHhhccccCCeEEecCCCC-C--HHHHHHHHHcC----------CCcEEEeCCCCcc---
Q 014285 283 PVHRDDWS-------GLHDVSNFARDTYGISVVADESCR-S--LNDVQKVMQEN----------LASVVNIKLAKFG--- 339 (427)
Q Consensus 283 P~~~~d~~-------~~~~L~~~~r~~~~iPIa~dE~~~-~--~~~~~~ll~~~----------a~~~i~lk~~~~G--- 339 (427)
....- ....+++ +.++||++.=... + ...++.+++.+ .++.+.+|.|..=
T Consensus 78 ---~~~~~ga~~~a~~v~~~A~----~~~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMiDgS~lp~eE 150 (357)
T 3qm3_A 78 ---NGEVLGAISGAKHVHLLAK----AYGVPVILHTDHAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLDLSEESLEE 150 (357)
T ss_dssp ---THHHHHHHHHHHHHHHHHH----HHTCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEECCCTTSCHHH
T ss_pred ---hhHHHHHHHHHHHHHHHHH----HCCCcEEEECCCCCccchHHHHHHHHHhHHHHhhhcCCCCCEEEEeCCCCCHHH
Confidence 00000 0123333 5789999864333 3 23456666542 5899999999873
Q ss_pred -HHHHHHHHHHHHHcCCcEE
Q 014285 340 -VLGTLQIIKATRKSGLHLM 358 (427)
Q Consensus 340 -i~~~~~~~~~A~~~gi~~~ 358 (427)
+..++++.++|++.|+.+-
T Consensus 151 NI~~Tk~vv~~ah~~gvsVE 170 (357)
T 3qm3_A 151 NLSTCEVYLQKLDALGVALE 170 (357)
T ss_dssp HHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHcCCeEE
Confidence 7779999999999999885
No 390
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=25.15 E-value=4.3e+02 Score=24.83 Aligned_cols=158 Identities=11% Similarity=0.090 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCc---hhhHHHHHHHHHhC----CCcEEEEeC--------CCC-CCHHHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNI---TADFDVLQAIHAVH----PHCSFILDA--------NEG-YTSEEAVEVL 267 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~---~~d~~~l~~ir~~~----~~~~L~vDA--------N~~-~s~~~A~~~l 267 (427)
+.++..+.++.+++.|++.|-.=-.-.. ..+...=+++++.. .++.|.-=. ++. .+++...+-+
T Consensus 62 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~ 141 (353)
T 3erp_A 62 RVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASL 141 (353)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHHHHHHHH
Confidence 5677778888889999998765432111 12222224555411 233332111 111 1555544333
Q ss_pred H-HhhhCC---CCCceEeCCCCCCC----hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc-----CCCcEEEeC
Q 014285 268 G-KLNDMG---VIPVLFEQPVHRDD----WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE-----NLASVVNIK 334 (427)
Q Consensus 268 ~-~L~~~~---l~~~~iEqP~~~~d----~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~-----~a~~~i~lk 334 (427)
+ .|+.++ +.++++-.|-+... |+.|.+|.+ .+.==+.|=|.++...++++++. ..+.++|+.
T Consensus 142 e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~ 216 (353)
T 3erp_A 142 DQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVR-----HGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPK 216 (353)
T ss_dssp HHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHH-----TTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEECB
T ss_pred HHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHH-----CCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeecc
Confidence 2 233332 22245555544322 455666653 34434556677888888777653 357778887
Q ss_pred CCCccHHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 335 LAKFGVLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 335 ~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
.+..--..-.+++..|+++||.++..+.+.+|
T Consensus 217 ~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G 248 (353)
T 3erp_A 217 YSLFERWVEDGLLALLQEKGVGSIAFSPLAGG 248 (353)
T ss_dssp CBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGG
T ss_pred ccccccchhhHHHHHHHHcCCeEEEecccccc
Confidence 76652111245889999999999998877654
No 391
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.14 E-value=3.2e+02 Score=25.11 Aligned_cols=54 Identities=11% Similarity=0.164 Sum_probs=34.6
Q ss_pred cCCeEEe--cCC---CCCHHHH-HHHHHcCCCcE-EEeCCCCccHHHHHHHHHHHHHcCCcEEEc
Q 014285 303 YGISVVA--DES---CRSLNDV-QKVMQENLASV-VNIKLAKFGVLGTLQIIKATRKSGLHLMID 360 (427)
Q Consensus 303 ~~iPIa~--dE~---~~~~~~~-~~ll~~~a~~~-i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~ 360 (427)
..+||.+ ..+ .++...| +++.+.+ +|. +.+|... .+..++.+.|+++|+....-
T Consensus 96 ~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aG-vdGvIipDlp~---ee~~~~~~~~~~~gl~~I~l 156 (271)
T 3nav_A 96 PETPIGLLMYANLVYARGIDDFYQRCQKAG-VDSVLIADVPT---NESQPFVAAAEKFGIQPIFI 156 (271)
T ss_dssp TTSCEEEEECHHHHHHTCHHHHHHHHHHHT-CCEEEETTSCG---GGCHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEecCcHHHHHhHHHHHHHHHHCC-CCEEEECCCCH---HHHHHHHHHHHHcCCeEEEE
Confidence 5778854 222 1355555 5555665 555 6667644 56778899999999986543
No 392
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=24.92 E-value=20 Score=35.05 Aligned_cols=50 Identities=18% Similarity=0.251 Sum_probs=30.8
Q ss_pred cccccccccccccccccccchhhheeccccccceeeeccccccccccccCCcceeeEE
Q 014285 11 PTCNFFFSPCVSRSLHRSQNVIKFCVSNVMAETTTVRTSERTSLGFKNLTETFWVDVQ 68 (427)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ts~g~~~~~~~~~~~I~ 68 (427)
-|-||+|.+=.+ .||+-..++....+-+++|-.+|+|..+.++.++++|+
T Consensus 14 ~~~~~~~~~m~~--------~mkI~~i~~~~~~~pl~~p~~~s~g~~~~~~~~~V~v~ 63 (383)
T 3toy_A 14 GTENLYFQSMMT--------TAAITGVTARAVITPMKRPLRNAFGVIDSGPLVLIDVT 63 (383)
T ss_dssp -----------C--------CCBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred ChhhccccccCC--------CCEEEEEEEEEEeccCCCcccCccccccceeEEEEEEE
Confidence 466888876221 26666677788889999999999998887777777765
No 393
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=24.91 E-value=39 Score=30.77 Aligned_cols=79 Identities=20% Similarity=0.303 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHhhc--CCcEEEEeccC--------CchhhHHHHHHHHHhCCCcEE-EEeCCCCCCHHHHHHHHHHhh
Q 014285 203 VSPAEASELASKYCKL--GFSTLKLNVGR--------NITADFDVLQAIHAVHPHCSF-ILDANEGYTSEEAVEVLGKLN 271 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~--Gf~~iKlKiG~--------~~~~d~~~l~~ir~~~~~~~L-~vDAN~~~s~~~A~~~l~~L~ 271 (427)
-+++++...++++... ||+.+|+. |. ....|...+-.+-+..+-+.. .+=.|-+|+.+.|.+.|..+.
T Consensus 115 IS~dDi~rAik~L~~LG~g~~v~~~~-g~~~VqSvp~el~~D~~~vLela~~~g~vt~~~L~~~l~W~~~Ra~~~L~~l~ 193 (234)
T 3cuq_A 115 VSQDDLIRAIKKLKALGTGFGIIPVG-GTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLL 193 (234)
T ss_dssp CCHHHHHHHHHHHGGGBTTCEEEEET-TEEEEECSCCCCCHHHHHHHHHHTTTSEECHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEEEC-CEEEEEeCCCccchHHHHHHHHHHhcCcCcHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4789988888777654 79999887 52 355666655433332111100 111356899999999999999
Q ss_pred hCCCCCceEeCCC
Q 014285 272 DMGVIPVLFEQPV 284 (427)
Q Consensus 272 ~~~l~~~~iEqP~ 284 (427)
..|+ .|+.+-.
T Consensus 194 ~~Gl--lwvD~q~ 204 (234)
T 3cuq_A 194 KEGL--AWLDLQA 204 (234)
T ss_dssp HHTS--CEEESSS
T ss_pred hCCC--EEEeCCC
Confidence 8887 4999533
No 394
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=24.83 E-value=4.8e+02 Score=25.22 Aligned_cols=120 Identities=12% Similarity=0.157 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEE----------------------ec--------------------cC----------Cc
Q 014285 204 SPAEASELASKYCKLGFSTLKL----------------------NV--------------------GR----------NI 231 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKl----------------------Ki--------------------G~----------~~ 231 (427)
+++.+.+.+++..+.||..+-+ |+ |. +.
T Consensus 158 d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~ 237 (392)
T 2nzl_A 158 DREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDP 237 (392)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCT
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCCh
Q ss_pred hhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE------eCCCCCCChhhHHHHHHhhccccCC
Q 014285 232 TADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF------EQPVHRDDWSGLHDVSNFARDTYGI 305 (427)
Q Consensus 232 ~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i------EqP~~~~d~~~~~~L~~~~r~~~~i 305 (427)
+...+.++.||+.. ++.+.|= +..++++ ++.+.+.+..-..+ ..-..+..++.+.++.+.+ ...+
T Consensus 238 ~~~~~~i~~lr~~~-~~PvivK--gv~~~e~----A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av--~~~i 308 (392)
T 2nzl_A 238 SISWEDIKWLRRLT-SLPIVAK--GILRGDD----AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAV--EGKV 308 (392)
T ss_dssp TCCHHHHHHHC--C-CSCEEEE--EECCHHH----HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHH--TTSS
T ss_pred HHHHHHHHHHHHhh-CCCEEEE--ecCCHHH----HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHc--CCCC
Q ss_pred eEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 306 SVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 306 PIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
||..|=-+.+..|+.+++..+ +|.+.+
T Consensus 309 pVia~GGI~~g~Dv~kalalG-Ad~V~i 335 (392)
T 2nzl_A 309 EVFLDGGVRKGTDVLKALALG-AKAVFV 335 (392)
T ss_dssp EEEECSSCCSHHHHHHHHHTT-CSEEEE
T ss_pred EEEEECCCCCHHHHHHHHHhC-CCeeEE
No 395
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=24.71 E-value=78 Score=30.60 Aligned_cols=64 Identities=13% Similarity=0.238 Sum_probs=48.1
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHH-------HHHHHHHHHHcCCcEEEcccCchhH
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFG-VLG-------TLQIIKATRKSGLHLMIDGMIETRL 367 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~-------~~~~~~~A~~~gi~~~~~s~~es~i 367 (427)
..|+.||+|.--.+...+..+ ..-.+|++-+|.+.+- +.. ...++.+|+..|+.++.-+ +|+.-
T Consensus 287 ~~G~~ialDDfG~g~ssl~~L-~~l~~d~iKiD~~~v~~~~~~~~~~~~v~~i~~~a~~l~~~vvaEG-VEt~~ 358 (400)
T 3sy8_A 287 IMGCGLAMDDFGAGYSSLDRL-CEFPFSQIKLDRTFVQKMKTQPRSCAVISSVVALAQALGISLVVEG-VESDE 358 (400)
T ss_dssp HHTCEEEEEEECSCSGGGGSS-SSCCCSEEEECTHHHHHHHHCTTHHHHHHHHHHHHHHHTCEEEECC-CCCHH
T ss_pred HCCCEEEEECCCCchhhHHHH-HhCCCCEEEECHHHHhhhhcChhHHHHHHHHHHHHHHcCCeEEEec-CCcHH
Confidence 479999999866666665543 3456999999988773 432 4568999999999999987 57743
No 396
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=24.70 E-value=4.7e+02 Score=25.03 Aligned_cols=142 Identities=11% Similarity=0.097 Sum_probs=77.4
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC---C-------chhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhh
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR---N-------ITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLN 271 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~---~-------~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~ 271 (427)
..|.+.+.+.++.+.+.|.+++|.-.-. . -++.++.++.+++. -++.+.-+.-...+++.+.+++
T Consensus 116 ~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e-~Gl~~~te~~d~~~~~~l~~~v---- 190 (350)
T 1vr6_A 116 VEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADK-YGMYVVTEALGEDDLPKVAEYA---- 190 (350)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEECSSGGGHHHHHHHC----
T ss_pred cCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHH-cCCcEEEEeCCHHHHHHHHHhC----
Confidence 4688888899999999999987764421 0 13445555444432 1366666665555544433321
Q ss_pred hCCCCCceEeCCCC-CCChhhHHHHHHhhccccCCeEEecCCCC-CHHHHHHHH----HcCCCcEEEeC-CCCc--cH--
Q 014285 272 DMGVIPVLFEQPVH-RDDWSGLHDVSNFARDTYGISVVADESCR-SLNDVQKVM----QENLASVVNIK-LAKF--GV-- 340 (427)
Q Consensus 272 ~~~l~~~~iEqP~~-~~d~~~~~~L~~~~r~~~~iPIa~dE~~~-~~~~~~~ll----~~~a~~~i~lk-~~~~--Gi-- 340 (427)
+ |+==|=. -.|+.-+++++ +++.||-+---.. ++.++..++ ..+..+++... -... +.
T Consensus 191 d------~lkIgAr~~~n~~LL~~va-----~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~ 259 (350)
T 1vr6_A 191 D------IIQIGARNAQNFRLLSKAG-----SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATR 259 (350)
T ss_dssp S------EEEECGGGTTCHHHHHHHH-----TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSS
T ss_pred C------EEEECcccccCHHHHHHHH-----ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcCh
Confidence 1 1111111 12445556665 4788998887765 777764443 44556766641 1111 11
Q ss_pred --HHHHHHHHHHHHcCCcEEE
Q 014285 341 --LGTLQIIKATRKSGLHLMI 359 (427)
Q Consensus 341 --~~~~~~~~~A~~~gi~~~~ 359 (427)
.....+..+.+..|++++.
T Consensus 260 ~~vdl~ai~~lk~~~~lpVi~ 280 (350)
T 1vr6_A 260 NTLDISAVPIIRKESHLPILV 280 (350)
T ss_dssp SBCCTTHHHHHHHHBSSCEEE
T ss_pred hhhhHHHHHHHHHhhCCCEEE
Confidence 1122334455566899866
No 397
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=24.63 E-value=4.2e+02 Score=24.43 Aligned_cols=148 Identities=12% Similarity=0.197 Sum_probs=95.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|-+.+=+--.. +.++=.+.++.+.+ ....+.+.+ .-++-+.+++++..+..++.|..
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA-GTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHHHcCCC
Confidence 56777888999999998887654321 33444556777777 456788887 44667899999999999988765
Q ss_pred CceEeCCC--CCCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPV--HRDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~--~~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|. ++.+ .+-++++++ .+++||.+=. .-.+.+.+.++. ..++++-+|-+- | +....
T Consensus 105 avlv~~P~y~~~~~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La--~~pnivgiKdss-gd~~~~~ 177 (297)
T 3flu_A 105 YTLSVVPYYNKPSQEGIYQHFKTIAE----ATSIPMIIYNVPGRTVVSMTNDTILRLA--EIPNIVGVKEAS-GNIGSNI 177 (297)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HCCSCEEEEECHHHHSSCCCHHHHHHHT--TSTTEEEEEECS-CCHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEECCchhccCCCHHHHHHHH--cCCCEEEEEeCC-CCHHHHH
Confidence 33444454 2222 223445554 5789998753 234566667776 357888899764 6 77666
Q ss_pred HHHHHHHHcCCcEEEc
Q 014285 345 QIIKATRKSGLHLMID 360 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~ 360 (427)
++++.. ..++.+..+
T Consensus 178 ~~~~~~-~~~f~v~~G 192 (297)
T 3flu_A 178 ELINRA-PEGFVVLSG 192 (297)
T ss_dssp HHHHHS-CTTCEEEEC
T ss_pred HHHHhc-CCCeEEEEC
Confidence 665432 134555544
No 398
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=24.15 E-value=4.3e+02 Score=29.66 Aligned_cols=101 Identities=10% Similarity=0.035 Sum_probs=57.3
Q ss_pred HHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEE-------EeCC--CCCCHHHHHHHHHHhhhCCCCCc
Q 014285 209 SELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFI-------LDAN--EGYTSEEAVEVLGKLNDMGVIPV 278 (427)
Q Consensus 209 ~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~-------vDAN--~~~s~~~A~~~l~~L~~~~l~~~ 278 (427)
.+.+++..+.|...|.+-... +...-...++.+++.+..+.-. +|+. ..++++..+++++.+.+.+.+..
T Consensus 630 ~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i 709 (1150)
T 3hbl_A 630 HKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHIL 709 (1150)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCee
Confidence 344566666777777666554 3444444556666655333222 2222 23567777788888877776655
Q ss_pred eEeCCCCCCChhhHHHHHHhhccccCCeEEe
Q 014285 279 LFEQPVHRDDWSGLHDVSNFARDTYGISVVA 309 (427)
Q Consensus 279 ~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~ 309 (427)
.|=+-.---......+|.+.+++..++||..
T Consensus 710 ~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~ 740 (1150)
T 3hbl_A 710 AIKDMAGLLKPKAAYELIGELKSAVDLPIHL 740 (1150)
T ss_dssp EEEETTCCCCHHHHHHHHHHHHHHCCSCEEE
T ss_pred eEcCccCCCCHHHHHHHHHHHHHhcCCeEEE
Confidence 5555554444455555555444456777765
No 399
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=23.97 E-value=4.3e+02 Score=24.35 Aligned_cols=123 Identities=19% Similarity=0.151 Sum_probs=70.2
Q ss_pred eeecCCCHHHHHHHHHHHhh-cCCcEEEEeccCC----chhhHHHHHHHHHh-CCCcEEE-EeCCCCCCHHHHHHHHHHh
Q 014285 198 ITIPAVSPAEASELASKYCK-LGFSTLKLNVGRN----ITADFDVLQAIHAV-HPHCSFI-LDANEGYTSEEAVEVLGKL 270 (427)
Q Consensus 198 ~~i~~~~~~~~~~~~~~~~~-~Gf~~iKlKiG~~----~~~d~~~l~~ir~~-~~~~~L~-vDAN~~~s~~~A~~~l~~L 270 (427)
.+.+..+.+++...++-.++ -|-+.+|+.+=.+ ..+-.+.+++.++. -.++++. +- .-++ ..+++|
T Consensus 69 ntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~---~~D~----~~ak~l 141 (268)
T 2htm_A 69 NTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFLVLPYM---GPDL----VLAKRL 141 (268)
T ss_dssp BCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCEECCEE---CSCH----HHHHHH
T ss_pred cccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCEEeecc---CCCH----HHHHHH
Confidence 34456778887655443333 4778888877421 11234455555553 2333333 11 1344 344455
Q ss_pred hhCCCCCceEeCCCC----CC----ChhhHHHHHHhhccccC-CeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 271 NDMGVIPVLFEQPVH----RD----DWSGLHDVSNFARDTYG-ISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 271 ~~~~l~~~~iEqP~~----~~----d~~~~~~L~~~~r~~~~-iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
++++-. .+ .|+. .+ +.+.++.+++ ...+ +||..|=-+.+..|+..+++.+ +|.+.+-
T Consensus 142 ~~~G~~--aV-mPlg~pIGsG~Gi~~~~~L~~i~~---~~~~~vPVI~~GGI~tpsDAa~AmeLG-AdgVlVg 207 (268)
T 2htm_A 142 AALGTA--TV-MPLAAPIGSGWGVRTRALLELFAR---EKASLPPVVVDAGLGLPSHAAEVMELG-LDAVLVN 207 (268)
T ss_dssp HHHTCS--CB-EEBSSSTTTCCCSTTHHHHHHHHH---TTTTSSCBEEESCCCSHHHHHHHHHTT-CCEEEES
T ss_pred HhcCCC--EE-EecCccCcCCcccCCHHHHHHHHH---hcCCCCeEEEeCCCCCHHHHHHHHHcC-CCEEEEC
Confidence 555543 45 4433 22 4444566653 1356 8999888999999999999986 6666554
No 400
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=23.88 E-value=4.4e+02 Score=24.47 Aligned_cols=118 Identities=15% Similarity=0.199 Sum_probs=66.0
Q ss_pred HHHHhhcCCcEEEEec--cCC--chhhHHHHHHHHHh--CCCcEEEEeCC-------CCCCH-HHHHHHHHHhhhCCCCC
Q 014285 212 ASKYCKLGFSTLKLNV--GRN--ITADFDVLQAIHAV--HPHCSFILDAN-------EGYTS-EEAVEVLGKLNDMGVIP 277 (427)
Q Consensus 212 ~~~~~~~Gf~~iKlKi--G~~--~~~d~~~l~~ir~~--~~~~~L~vDAN-------~~~s~-~~A~~~l~~L~~~~l~~ 277 (427)
+++.++.|..++|+-+ +.+ -.+-++.++.+.+. --++.+.+|.. +..++ +...+.++...+++..
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD- 192 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGAD- 192 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCS-
T ss_pred HHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCC-
Confidence 4455688999999655 332 22233445555542 34677776652 11345 4445557888888875
Q ss_pred ceEeCCCC---CCChhhHHHHHHhhccccCCe-E--EecCCCCCH-HHHHHHHHcCCCcEEE
Q 014285 278 VLFEQPVH---RDDWSGLHDVSNFARDTYGIS-V--VADESCRSL-NDVQKVMQENLASVVN 332 (427)
Q Consensus 278 ~~iEqP~~---~~d~~~~~~L~~~~r~~~~iP-I--a~dE~~~~~-~~~~~ll~~~a~~~i~ 332 (427)
|+--+.+ .++++.++++++.....+++| | +.|.+.-.. ..++.+++.++ +.+.
T Consensus 193 -~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa-~Gv~ 252 (304)
T 1to3_A 193 -LYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGA-SGFL 252 (304)
T ss_dssp -EEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTC-CEEE
T ss_pred -EEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCC-eEEE
Confidence 6655553 246788888776211126778 6 555532221 33566777654 4443
No 401
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=23.63 E-value=3.1e+02 Score=22.65 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhhcCCcEEEEec-cCCchhhHHHHHHHHHhCCCcEEEEeCCC--------CCCHHHHHHHHHHhhhCCC
Q 014285 205 PAEASELASKYCKLGFSTLKLNV-GRNITADFDVLQAIHAVHPHCSFILDANE--------GYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 205 ~~~~~~~~~~~~~~Gf~~iKlKi-G~~~~~d~~~l~~ir~~~~~~~L~vDAN~--------~~s~~~A~~~l~~L~~~~l 275 (427)
++.+.+.++.+.+.|+. +.+-- |. + ..+.++.+.+....+.+.+|+-. +.+.+.+++.++.|.+.++
T Consensus 18 ~~~~~~l~~~~~~~g~~-~~l~TNG~-l--~~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~~~g~ 93 (182)
T 3can_A 18 PEFLIDILKRCGQQGIH-RAVDTTLL-A--RKETVDEVMRNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVAEADF 93 (182)
T ss_dssp HHHHHHHHHHHHHTTCC-EEEECTTC-C--CHHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCc-EEEECCCC-C--CHHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCC
Confidence 33334555555566753 22222 32 2 12344555554334555566520 1123667777777777776
Q ss_pred CCceEeCCCCC---CChhhHHHHHHhhccccC--CeEEecCCCC-CHHHHHHHHHcCCCcEEEeCCCCccHHH--HHHHH
Q 014285 276 IPVLFEQPVHR---DDWSGLHDVSNFARDTYG--ISVVADESCR-SLNDVQKVMQENLASVVNIKLAKFGVLG--TLQII 347 (427)
Q Consensus 276 ~~~~iEqP~~~---~d~~~~~~L~~~~r~~~~--iPIa~dE~~~-~~~~~~~ll~~~a~~~i~lk~~~~Gi~~--~~~~~ 347 (427)
+ .++.=++-+ ++.+.+.++.+.+++..+ .++..-.-.. +...... +.. .+..-.+++. -... ..++.
T Consensus 94 ~-v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~-l~~-~y~~~~~~~~--~~e~~~l~~~~ 168 (182)
T 3can_A 94 P-YYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKHAK-LGS-IYNPKGYKMQ--TPSEEVQQQCI 168 (182)
T ss_dssp C-EEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECCC--------------------CCB--CCCHHHHHHHH
T ss_pred e-EEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHHHH-hCC-cCcccCCCCC--CHHHHHHHHHH
Confidence 5 477777655 455555555544332213 3444332111 1111111 100 0000011111 0123 67788
Q ss_pred HHHHHcCCcEEEc
Q 014285 348 KATRKSGLHLMID 360 (427)
Q Consensus 348 ~~A~~~gi~~~~~ 360 (427)
+.|+++|+.+.++
T Consensus 169 ~~~~~~g~~~~i~ 181 (182)
T 3can_A 169 QILTDYGLKATIG 181 (182)
T ss_dssp HHHHHTTCCEEEC
T ss_pred HHHHHcCCceEeC
Confidence 8899999998774
No 402
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=23.62 E-value=4.4e+02 Score=24.33 Aligned_cols=154 Identities=15% Similarity=0.129 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHH---hC----CCcEEEEeC-CCCCCHHH---H-HHHHHHhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHA---VH----PHCSFILDA-NEGYTSEE---A-VEVLGKLN 271 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~---~~----~~~~L~vDA-N~~~s~~~---A-~~~l~~L~ 271 (427)
+.++..+.++.+++.|++.|-.=-.-.-++ ..=+++++ .+ .++-|.-=. +..++++. + -+-|++|.
T Consensus 27 ~~~~~~~~v~~Al~~Gi~~~DTA~~Yg~E~--~vG~al~~~~~~~~~~R~~~~i~TK~~~~~~~~~~i~~~~~~SL~rL~ 104 (317)
T 1qwk_A 27 SPAEVITAVKTAVKAGYRLIDTASVYQNEE--AIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQ 104 (317)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECCGGGTCHH--HHHHHHHHHHHHTSCCGGGCEEEEEECTTTSSTTTHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEccccccCHH--HHHHHHHHHhhcCCCChhheEEEeeeCCCcCCHHHHHHHHHHHHHHhC
Confidence 567777788888999999876533211121 22244444 12 233332111 11223222 2 23444553
Q ss_pred hCCCCCceEeCCCC-------------CCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcC--CCcEEEeCCC
Q 014285 272 DMGVIPVLFEQPVH-------------RDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQEN--LASVVNIKLA 336 (427)
Q Consensus 272 ~~~l~~~~iEqP~~-------------~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~--a~~~i~lk~~ 336 (427)
---+.++++-.|-+ .+-|+.|.+|.+ .|.==+.|=|-++...++++++.. .+.++|+..+
T Consensus 105 ~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~ 179 (317)
T 1qwk_A 105 LEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYK-----AGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELH 179 (317)
T ss_dssp CSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHH-----TTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECB
T ss_pred CCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHH-----cCCeeEEEecCCCHHHHHHHHHhcCCccceecceec
Confidence 21122234544532 122445566653 222113344667888899988754 3577777665
Q ss_pred CccHHHHHHHHHHHHHcCCcEEEcccCchh
Q 014285 337 KFGVLGTLQIIKATRKSGLHLMIDGMIETR 366 (427)
Q Consensus 337 ~~Gi~~~~~~~~~A~~~gi~~~~~s~~es~ 366 (427)
..- .-.+++..|+++||.++..+.+.+|
T Consensus 180 ~~~--~~~~l~~~~~~~gI~v~a~spL~~G 207 (317)
T 1qwk_A 180 LYF--PQHDHVDFCKKHNISVTSYATLGSP 207 (317)
T ss_dssp TTB--CCHHHHHHHHHTTCEEEEESTTCSC
T ss_pred ccc--CcHHHHHHHHHcCCEEEEecCccCC
Confidence 432 1146889999999999988776544
No 403
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=23.50 E-value=2.8e+02 Score=24.36 Aligned_cols=41 Identities=15% Similarity=0.211 Sum_probs=31.4
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCC
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKL 335 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~ 335 (427)
+.++++++ .+++|+..+-.+.++.+++.+++.+ +|.+.+..
T Consensus 65 ~~i~~i~~----~~~ipv~v~ggI~~~~~~~~~l~~G-ad~V~lg~ 105 (244)
T 1vzw_A 65 ALIAEVAQ----AMDIKVELSGGIRDDDTLAAALATG-CTRVNLGT 105 (244)
T ss_dssp HHHHHHHH----HCSSEEEEESSCCSHHHHHHHHHTT-CSEEEECH
T ss_pred HHHHHHHH----hcCCcEEEECCcCCHHHHHHHHHcC-CCEEEECc
Confidence 45666664 5789998888888888988888876 77777543
No 404
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=23.46 E-value=2.7e+02 Score=27.19 Aligned_cols=25 Identities=16% Similarity=0.159 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEec
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNV 227 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKi 227 (427)
+|.+.+.+.++...+.|-.++|+-.
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~ 65 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQM 65 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeee
Confidence 4778888888888899999998754
No 405
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=23.36 E-value=4.2e+02 Score=24.00 Aligned_cols=62 Identities=8% Similarity=0.178 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHhhc----CCcEEEEeccC--Cchh---hHHHHHHHHHhCCCcEEEEeCC----CC---CCHHHHHHHH
Q 014285 204 SPAEASELASKYCKL----GFSTLKLNVGR--NITA---DFDVLQAIHAVHPHCSFILDAN----EG---YTSEEAVEVL 267 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~----Gf~~iKlKiG~--~~~~---d~~~l~~ir~~~~~~~L~vDAN----~~---~s~~~A~~~l 267 (427)
+.+++.+..+.+.+. .+.+ +|+|. +.+. =.+.++..++.++++.+.+|.+ ++ |+ +++.+.+
T Consensus 58 ~~~~~~~~~~~~~~~~~l~~~d~--v~~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~-~~~~~~l 134 (289)
T 3pzs_A 58 PASHLTDIVQGIADIDRLKDCDA--VLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA-PGVAEFF 134 (289)
T ss_dssp CHHHHHHHHHHHHHTTCGGGCCE--EEECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC-HHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCccCCCE--EEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC-HHHHHHH
Confidence 567777777776554 5777 46663 2211 1233455555678899999964 32 45 5555555
Q ss_pred H
Q 014285 268 G 268 (427)
Q Consensus 268 ~ 268 (427)
+
T Consensus 135 ~ 135 (289)
T 3pzs_A 135 C 135 (289)
T ss_dssp H
T ss_pred H
Confidence 5
No 406
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=23.32 E-value=4.9e+02 Score=24.79 Aligned_cols=118 Identities=18% Similarity=0.217 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC-------------------------------------------------Cchhh
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR-------------------------------------------------NITAD 234 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~-------------------------------------------------~~~~d 234 (427)
+++.+.+.++++.+.||+++-+.++. +...+
T Consensus 134 d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~ 213 (370)
T 1gox_A 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLS 213 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCC
T ss_pred CchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccch
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE------eCCCCCCChhhHHHHHHhhcccc--CCe
Q 014285 235 FDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF------EQPVHRDDWSGLHDVSNFARDTY--GIS 306 (427)
Q Consensus 235 ~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i------EqP~~~~d~~~~~~L~~~~r~~~--~iP 306 (427)
.+.++.+|+.. ++.+.+ -+..++++| +.+.+.+.....+ ...-...+++.+.++.+ .. .+|
T Consensus 214 ~~~i~~l~~~~-~~pv~v--K~~~~~e~a----~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~----~~~~~ip 282 (370)
T 1gox_A 214 WKDVAWLQTIT-SLPILV--KGVITAEDA----RLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVK----AAQGRIP 282 (370)
T ss_dssp HHHHHHHHHHC-CSCEEE--ECCCSHHHH----HHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHH----HTTTSSC
T ss_pred HHHHHHHHHHh-CCCEEE--EecCCHHHH----HHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHH----HhCCCCE
Q ss_pred EEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 307 VVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 307 Ia~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
|..+=-+.+..|+.+++..+ ++.+++
T Consensus 283 via~GGI~~~~D~~k~l~~G-AdaV~i 308 (370)
T 1gox_A 283 VFLDGGVRRGTDVFKALALG-AAGVFI 308 (370)
T ss_dssp EEEESSCCSHHHHHHHHHHT-CSEEEE
T ss_pred EEEECCCCCHHHHHHHHHcC-CCEEee
No 407
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=23.28 E-value=4.8e+02 Score=24.71 Aligned_cols=119 Identities=15% Similarity=0.159 Sum_probs=73.2
Q ss_pred HHHHHHhhc--CCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeC-CC-
Q 014285 210 ELASKYCKL--GFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQ-PV- 284 (427)
Q Consensus 210 ~~~~~~~~~--Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEq-P~- 284 (427)
+.++.+++. |...+-+.... +...-.+.++.+|+.+|++.+.+ -...++++|....+ .+.....+-. |-
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~--g~v~t~e~A~~a~~----aGaD~I~v~~g~G~ 194 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMA--GNVVTGEMVEELIL----SGADIIKVGIGPGS 194 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEE--EEECSHHHHHHHHH----TTCSEEEECSSCST
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEE--EeCCCHHHHHHHHH----hCCCEEEECCCCCc
Confidence 455666665 88887776532 34445678899999887777764 23457887765544 3332111211 10
Q ss_pred ----------CCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCC
Q 014285 285 ----------HRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 285 ----------~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
...++..+.++.+.. ...++||..|=-+.+..|+.+++..+ ++.+++--.
T Consensus 195 ~~~~r~~~g~~~p~~~~l~~v~~~~-~~~~ipvIa~GGI~~g~di~kAlalG-A~~V~vG~~ 254 (351)
T 2c6q_A 195 VCTTRKKTGVGYPQLSAVMECADAA-HGLKGHIISDGGCSCPGDVAKAFGAG-ADFVMLGGM 254 (351)
T ss_dssp TBCHHHHHCBCCCHHHHHHHHHHHH-HHTTCEEEEESCCCSHHHHHHHHHTT-CSEEEESTT
T ss_pred CcCccccCCCCccHHHHHHHHHHHH-hhcCCcEEEeCCCCCHHHHHHHHHcC-CCceeccHH
Confidence 111233444544321 13579999999999999999999987 677776443
No 408
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=23.25 E-value=4.3e+02 Score=24.15 Aligned_cols=147 Identities=16% Similarity=0.141 Sum_probs=94.3
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|.+.+=+--.. +.++=.+.++.+.+ ....+.+.+=+ ++-+.+++++..+..++.|..
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-g~~~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA-GSNCTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC-CCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-CCCCHHHHHHHHHHHHhcCCC
Confidence 67778888999999999887664321 33444556677776 45567777655 456889999999998887654
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|.- +.+ ++-++++++ .+++||.+=. .-.+.+.+.++.+. .++++-+|-+- | +....
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ia~----a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pnivgiK~s~-gd~~~~~ 171 (289)
T 2yxg_A 98 AVLSITPYYNKPTQEGLRKHFGKVAE----SINLPIVLYNVPSRTAVNLEPKTVKLLAEE-YSNISAVKEAN-PNLSQVS 171 (289)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HCSSCEEEEECHHHHSCCCCHHHHHHHHHH-CTTEEEEEECC-SCTHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hcCCCEEEEeCccccCcCCCHHHHHHHHHh-CCCEEEEEeCC-CCHHHHH
Confidence 223344442 222 223345554 5789998743 23566677788733 37888898664 6 76666
Q ss_pred HHHHHHHHcCCcEEEc
Q 014285 345 QIIKATRKSGLHLMID 360 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~ 360 (427)
++++.. ++.+..+
T Consensus 172 ~~~~~~---~f~v~~G 184 (289)
T 2yxg_A 172 ELIHDA---KITVLSG 184 (289)
T ss_dssp HHHHHT---CSEEEES
T ss_pred HHHHhC---CeEEEEC
Confidence 665543 6666554
No 409
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=22.71 E-value=1e+02 Score=29.76 Aligned_cols=81 Identities=19% Similarity=0.248 Sum_probs=47.6
Q ss_pred HHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHH---------cCCCcEEEeCC
Q 014285 265 EVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQ---------ENLASVVNIKL 335 (427)
Q Consensus 265 ~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~---------~~a~~~i~lk~ 335 (427)
+++.++-+.|.| .++|-|+..++.+.|.++++ +.++.++.+........++++++ .+.+.++....
T Consensus 85 ~~a~~al~aGkh-Vl~EKPl~~~ea~~l~~~A~----~~g~~~~v~~~yr~~p~vr~~i~~~~~l~~~~~~~~~~i~~~~ 159 (372)
T 4gmf_A 85 QLARHFLARGVH-VIQEHPLHPDDISSLQTLAQ----EQGCCYWINTFYPHTRAGRTWLRDAQQLRRCLAKTPPVVHATT 159 (372)
T ss_dssp HHHHHHHHTTCE-EEEESCCCHHHHHHHHHHHH----HHTCCEEEECSGGGSHHHHHHHHHHHHHHHHHTSCCSEEEEEE
T ss_pred HHHHHHHHcCCc-EEEecCCCHHHHHHHHHHHH----HcCCEEEEcCcccCCHHHHHHHHHHHHHHhhccCCceEEEEEe
Confidence 344444445777 59999997666667777765 67899998875543333333321 34566666654
Q ss_pred CCccHHHHHHHHHHH
Q 014285 336 AKFGVLGTLQIIKAT 350 (427)
Q Consensus 336 ~~~Gi~~~~~~~~~A 350 (427)
+.-.+.....++..+
T Consensus 160 s~q~~y~~~dil~~a 174 (372)
T 4gmf_A 160 SRQLLYSTLDLLLLA 174 (372)
T ss_dssp CTTTHHHHHHHHHHH
T ss_pred ccccccchHHHHHHh
Confidence 443344444544443
No 410
>1h2i_A RAD52, DNA repair protein RAD52 homolog; DNA-binding protein, DNA recombination; HET: DNA; 2.7A {Homo sapiens} SCOP: d.50.1.3 PDB: 1kn0_A
Probab=22.31 E-value=2.7e+02 Score=24.69 Aligned_cols=73 Identities=14% Similarity=0.045 Sum_probs=47.4
Q ss_pred hheeccccccceeeeccccccccccc-------------cCCcceeeEEEEEEEEEEeeccccccccceeEEeeeEEEEE
Q 014285 33 KFCVSNVMAETTTVRTSERTSLGFKN-------------LTETFWVDVQRAEGRELNVALSAPLSLGLSSVENVENVAIR 99 (427)
Q Consensus 33 ~~~~~~~~~~~~~f~~~~~ts~g~~~-------------~~~~~~~~I~~i~~~~~~~pl~~p~~~a~~~~~~~~~vlV~ 99 (427)
+.+..++-++.+.+|.-.+++.=-|- --..|...|.++++..+.. ..+...-.-.++||
T Consensus 41 ~~L~~~lgpe~is~R~g~gg~kv~YIeg~kvI~lANeiFGFNGWSs~I~~~~vd~~d~--------~~gk~~v~~~aiVR 112 (209)
T 1h2i_A 41 KALRQRLGPEYISSRMAGGGQKVCYIEGHRVINLANEMFGYNGWAHSITQQNVDFVDL--------NNGKFYVGVCAFVR 112 (209)
T ss_dssp HHHHCCBCTTTEEEEECTTSCEEEEECHHHHHHHHHHHHCTTTEEEEEEEEEEEEEEE--------SSSSEEEEEEEEEE
T ss_pred HHHhcccCchhheeccCCCCceEEEeeHHHHHHHHHhccCCCCCeeEEEEeeceeEec--------cCCeEEEEEEEEEE
Confidence 33445678888998886555432220 0148999999988755442 12344455678899
Q ss_pred EEEcCC----ceEEEEee
Q 014285 100 VELSNG----CVGWGEVA 113 (427)
Q Consensus 100 v~t~~G----~~G~GE~~ 113 (427)
|+..+| -+|+|++.
T Consensus 113 VtLkDGt~~EdiG~G~~~ 130 (209)
T 1h2i_A 113 VQLKDGSYHEDVGYGVSE 130 (209)
T ss_dssp EEETTSCEEEEEEEEEEE
T ss_pred EEECCCCEecceeeEEEe
Confidence 999999 45777765
No 411
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=22.27 E-value=4.6e+02 Score=24.08 Aligned_cols=148 Identities=14% Similarity=0.140 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHHh-CCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHAV-HPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~~-~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|.+.+=+--.. +.++=.+.++.+.+. ...+.+.+=+ ++-+.+++++..+..++.|..
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-g~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV-LVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE-CCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-CCccHHHHHHHHHHHHhcCCC
Confidence 56777888999999998886654321 334445567777774 4566666544 456789999999999887754
Q ss_pred CceEeCCCC---CCC---hhhHHHHHHhhcccc---CCeEEecC------CCCCHHHHHHHHHcCCCc-EEEeCCCCcc-
Q 014285 277 PVLFEQPVH---RDD---WSGLHDVSNFARDTY---GISVVADE------SCRSLNDVQKVMQENLAS-VVNIKLAKFG- 339 (427)
Q Consensus 277 ~~~iEqP~~---~~d---~~~~~~L~~~~r~~~---~iPIa~dE------~~~~~~~~~~ll~~~a~~-~i~lk~~~~G- 339 (427)
-..+=-|.- +.+ ++-++++++ .+ ++||.+=. .-.+.+.+.++.+. .++ ++-+|-+- |
T Consensus 101 avlv~~P~y~~~~s~~~l~~~f~~va~----a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pn~ivgiKds~-gd 174 (294)
T 3b4u_A 101 NILLAPPSYFKNVSDDGLFAWFSAVFS----KIGKDARDILVYNIPSVTMVTLSVELVGRLKAA-FPGIVTGVKDSS-GN 174 (294)
T ss_dssp EEEECCCCSSCSCCHHHHHHHHHHHHH----HHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHH-CTTTEEEEEECC-CC
T ss_pred EEEEcCCcCCCCCCHHHHHHHHHHHHH----hcCCCCCcEEEEECcchhCcCCCHHHHHHHHHh-CCCcEEEEEECC-CC
Confidence 223334432 222 223345554 56 89998743 23566667788733 377 88899664 6
Q ss_pred HHHHHHHHHHHHHcCCcEEEc
Q 014285 340 VLGTLQIIKATRKSGLHLMID 360 (427)
Q Consensus 340 i~~~~~~~~~A~~~gi~~~~~ 360 (427)
+....++++... ++.+..+
T Consensus 175 ~~~~~~~~~~~~--~f~v~~G 193 (294)
T 3b4u_A 175 WSHTERLLKEHG--DLAILIG 193 (294)
T ss_dssp HHHHHHHHHHHT--TSEEEEC
T ss_pred HHHHHHHHHhCC--CeEEEEc
Confidence 777777765543 6666554
No 412
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=22.26 E-value=4.2e+02 Score=25.41 Aligned_cols=122 Identities=14% Similarity=0.083 Sum_probs=71.5
Q ss_pred HHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHh----CC--CcEEE--------EeC---CCCCC-HHHHHHHHHHhh
Q 014285 211 LASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAV----HP--HCSFI--------LDA---NEGYT-SEEAVEVLGKLN 271 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~----~~--~~~L~--------vDA---N~~~s-~~~A~~~l~~L~ 271 (427)
.+++..+.||+.+-+.... ++++.++..+.+-+. += +.+|- ++. ...|| |+||.+|.+++.
T Consensus 116 ~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah~~gvsVEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg 195 (349)
T 3elf_A 116 RVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEALG 195 (349)
T ss_dssp HHHTTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC-------------CCCHHHHHHHHHHHT
T ss_pred HHHHHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeccccccCCcccccccccCCCHHHHHHHHHHhC
Confidence 3444445679999998875 788888887776552 21 11211 111 23464 999999999876
Q ss_pred h-----------CC-CCCceE-eCCCCCCChhhHHHHHHhhccc-------cCCeEEecC-CCCCHHHHHHHHHcCCCcE
Q 014285 272 D-----------MG-VIPVLF-EQPVHRDDWSGLHDVSNFARDT-------YGISVVADE-SCRSLNDVQKVMQENLASV 330 (427)
Q Consensus 272 ~-----------~~-l~~~~i-EqP~~~~d~~~~~~L~~~~r~~-------~~iPIa~dE-~~~~~~~~~~ll~~~a~~~ 330 (427)
. +| .|=.|= .+ +.-|++-++++.+.++++ .++|+.+-= |=...++++++++.+ +.=
T Consensus 196 ~~~~gvD~LAvaiGt~HG~Yk~g~--p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ai~~G-V~K 272 (349)
T 3elf_A 196 AGEHGKYLLAATFGNVHGVYKPGN--VKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALRYG-VVK 272 (349)
T ss_dssp TSTTSCEEEEECSSCBSSCCCTTS--SCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHHHHHHHHTT-EEE
T ss_pred CCCCCceEEEEecCCcccCCCCCC--CccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCHHHHHHHHHcC-CEE
Confidence 1 00 110121 12 334677788776543211 268887754 667788899999876 444
Q ss_pred EEeCC
Q 014285 331 VNIKL 335 (427)
Q Consensus 331 i~lk~ 335 (427)
+|++.
T Consensus 273 iNi~T 277 (349)
T 3elf_A 273 MNVDT 277 (349)
T ss_dssp EEECH
T ss_pred EEcch
Confidence 66654
No 413
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=22.11 E-value=4.7e+02 Score=24.17 Aligned_cols=151 Identities=14% Similarity=0.162 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|...+=+-- |. +.++=.+.++.+.+ +...+.+.+=+ ++-+.+++++..+..++.|..
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv-g~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA-GTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC-CCccHHHHHHHHHHHHhcCCC
Confidence 677788889999999988866543 21 33444556777776 45567777655 556889999999998887654
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|.- +.+ ++-++++++ .+++||.+=. .-.+.+.+.++.+. .++++-+|-+- | +....
T Consensus 110 avlv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pnIvgiKdss-gd~~~~~ 183 (306)
T 1o5k_A 110 GVLVVTPYYNKPTQEGLYQHYKYISE----RTDLGIVVYNVPGRTGVNVLPETAARIAAD-LKNVVGIXEAN-PDIDQID 183 (306)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHT----TCSSCEEEEECHHHHSCCCCHHHHHHHHHH-CTTEEEEEECC-CCHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEeCccccCcCCCHHHHHHHHHh-CCCEEEEeCCC-CCHHHHH
Confidence 223444542 222 223344543 6789998743 23566667788732 37889999766 6 77777
Q ss_pred HHHHHHHHc--CCcEEEcc
Q 014285 345 QIIKATRKS--GLHLMIDG 361 (427)
Q Consensus 345 ~~~~~A~~~--gi~~~~~s 361 (427)
++++..... ++.+..+.
T Consensus 184 ~~~~~~~~~~~~f~v~~G~ 202 (306)
T 1o5k_A 184 RTVSLTKQARSDFMVWSGN 202 (306)
T ss_dssp HHHHHHHHHCTTCEEEESS
T ss_pred HHHHhcCCCCCcEEEEECc
Confidence 777665432 56665543
No 414
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=21.83 E-value=1.7e+02 Score=26.02 Aligned_cols=104 Identities=12% Similarity=0.142 Sum_probs=53.8
Q ss_pred HHHHHHHHhC-CCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEe-cCCC
Q 014285 236 DVLQAIHAVH-PHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVA-DESC 313 (427)
Q Consensus 236 ~~l~~ir~~~-~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~-dE~~ 313 (427)
+.++.+++.| ..++|+.+.... +. +..++.+.++++++.+.++. |. .+.. ++++
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~-~~-~~~~~~~~l~~~gl~i~~~~-~~---------------------~~~~~~~~~ 82 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAG-PP-DTEALTAAIQLQGLECVFSS-PL---------------------ELWREDGQL 82 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSS-CC-CHHHHHHHHHHTTCEEEEEE-EE---------------------EEECTTSSB
T ss_pred HHHHHHHHcCCCEEEEEHHhcCC-CH-HHHHHHHHHHHcCCEEEEec-ch---------------------hhcCCchhH
Confidence 4677777775 678888652111 12 44556667777776432221 10 0100 1222
Q ss_pred -CCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEcccC
Q 014285 314 -RSLNDVQKVMQENLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 314 -~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
.......++...-.+.++++-+.... -....++++.|+++|+.+.++...
T Consensus 83 ~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lEn~~ 134 (264)
T 1yx1_A 83 NPELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQ 134 (264)
T ss_dssp CTTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCEEEEecCC
Confidence 23333333333334555555432221 114567788889999999888753
No 415
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=21.83 E-value=1.7e+02 Score=26.79 Aligned_cols=66 Identities=12% Similarity=0.182 Sum_probs=37.4
Q ss_pred HHHHHHHHHHh--hcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCC-----CC--HHHHHHHHHHhhh
Q 014285 206 AEASELASKYC--KLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEG-----YT--SEEAVEVLGKLND 272 (427)
Q Consensus 206 ~~~~~~~~~~~--~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~-----~s--~~~A~~~l~~L~~ 272 (427)
+.+.++.+.+. +..+.++|+-.-.+ .+-++.+...-+..++..+.+|.|.+ |. .+++++.++.|-+
T Consensus 59 ~~~~~~~~~~~~~d~~~daik~G~l~s-~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~ 133 (282)
T 3h74_A 59 TWLPQVFAHWTRAQLHFDQALIGYVGS-VALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQ 133 (282)
T ss_dssp TTHHHHHHHHHHTTCCCSEEEECCCCS-HHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHcCCccCEEEECCCCC-HHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhc
Confidence 45556666664 34567776643333 23334443333334778899999843 64 4677766665543
No 416
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=21.68 E-value=5.8e+02 Score=25.06 Aligned_cols=121 Identities=13% Similarity=0.165 Sum_probs=70.4
Q ss_pred HHHHHHhhcCCcEEEEeccC-------CchhhHHH------HHHHHHh-------------CCCc----EEEEeCCC-CC
Q 014285 210 ELASKYCKLGFSTLKLNVGR-------NITADFDV------LQAIHAV-------------HPHC----SFILDANE-GY 258 (427)
Q Consensus 210 ~~~~~~~~~Gf~~iKlKiG~-------~~~~d~~~------l~~ir~~-------------~~~~----~L~vDAN~-~~ 258 (427)
+.+.++++.||+.|-+.-.. ++++++.. ++..++. |-++ ....+..+ .+
T Consensus 108 e~i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~v~~~~~~~~~~~~~ 187 (420)
T 2fiq_A 108 ELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEASAIQSVHI 187 (420)
T ss_dssp HHHHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSCC----------CCC
T ss_pred HHHHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecCCCCCcccccCCCCC
Confidence 56788899999999998763 34555533 3333332 0011 11111212 25
Q ss_pred -CHHHHHHHHH----HhhhCCCCCc----eE--e-C--------CCCCCChhhHHHHHHhhccccCCe-EEe---cCCCC
Q 014285 259 -TSEEAVEVLG----KLNDMGVIPV----LF--E-Q--------PVHRDDWSGLHDVSNFARDTYGIS-VVA---DESCR 314 (427)
Q Consensus 259 -s~~~A~~~l~----~L~~~~l~~~----~i--E-q--------P~~~~d~~~~~~L~~~~r~~~~iP-Ia~---dE~~~ 314 (427)
+|++|.++++ .|.+.|+. . || = | -.+.-|++.+++|++ .+++| +.+ +=|-.
T Consensus 188 T~PeeA~~Fve~~~~~~~~tGvd-~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~----~v~~P~LVle~HGgSg~ 262 (420)
T 2fiq_A 188 THVEDAANTLRTHQKAFIARGLT-EALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQ----WIENTRMVYEAHSTDYQ 262 (420)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCH-HHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHH----HHTTSSCEEEESCCTTC
T ss_pred CCHHHHHHHHHHHHHHHHhhCCC-cccccceEEEEeCCccCCCCCCCCcCHHHHHHHHH----hcCCCCEEEecCCCCCC
Confidence 5999999998 45454432 1 11 0 0 123457888888876 46678 665 55777
Q ss_pred CHHHHHHHHHcCCCcEEEeCCC
Q 014285 315 SLNDVQKVMQENLASVVNIKLA 336 (427)
Q Consensus 315 ~~~~~~~ll~~~a~~~i~lk~~ 336 (427)
+..+++++++.+ +..+++-+.
T Consensus 263 ~~e~l~~~v~~G-i~kiNV~t~ 283 (420)
T 2fiq_A 263 TRTAYWELVRDH-FAILKVGPA 283 (420)
T ss_dssp CHHHHHHHHHTT-EEEEEECHH
T ss_pred CHHHHHHHHHcC-CCEEEECHH
Confidence 888899999865 555665543
No 417
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=21.59 E-value=4.8e+02 Score=24.05 Aligned_cols=60 Identities=20% Similarity=0.218 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccCCch----hhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHH
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGRNIT----ADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEV 266 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~----~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~ 266 (427)
+++++.+.++++.+.|++.|-+--|.++. .=.+.++.+++. ++.+.+. ++..+.+.+..+
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~~~i~~s-~g~l~~e~l~~L 148 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM--GVAVTLS-LGEWPREYYEKW 148 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT--SCEEEEE-CCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc--CceEEEe-cCCCCHHHHHHH
Confidence 68888888888888999999886564332 224456666665 5555543 345565553333
No 418
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=21.47 E-value=1.9e+02 Score=28.06 Aligned_cols=74 Identities=12% Similarity=0.002 Sum_probs=51.5
Q ss_pred ccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc-cHH------HHHHHHHHHHHcCCcEEEcccCchhHHHHHHHH
Q 014285 302 TYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF-GVL------GTLQIIKATRKSGLHLMIDGMIETRLATGFALH 374 (427)
Q Consensus 302 ~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~-Gi~------~~~~~~~~A~~~gi~~~~~s~~es~ig~~a~~h 374 (427)
..|+.||+|.--.+...+..+. .-.+|+|-+|.+.+ ++. -...++.+|+..|+.++..+ +|+. .-+.
T Consensus 333 ~~G~~ialDDfG~g~ssl~~L~-~l~~d~iKiD~~~i~~~~~~~~~~~~~~~i~~~~~~~~~viaeg-VEt~----~~~~ 406 (437)
T 3hvb_A 333 TLHCQAAISQFGCSLNPFNALK-HLTVQFIKIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVPF-VESA----SVLA 406 (437)
T ss_dssp HTTCEEEEEEETCSSSHHHHHT-TSCCSEEEECGGGSSCCSSHHHHHHHHHHHHHHHHTTCEEEECC-CCSH----HHHH
T ss_pred HCCCEEEEcCCCCCccHHHHHh-hCCCCEEEECHHHHHhHhhCcHHHHHHHHHHHHHHcCCCEEeee-eCCH----HHHH
Confidence 5799999998666655665444 44699999998776 221 24678899999999999875 6774 3334
Q ss_pred HHhhcCC
Q 014285 375 LAAGLGC 381 (427)
Q Consensus 375 laaal~~ 381 (427)
+...+|+
T Consensus 407 ~l~~~G~ 413 (437)
T 3hvb_A 407 TLWQAGA 413 (437)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 4444443
No 419
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=21.32 E-value=1.6e+02 Score=25.83 Aligned_cols=59 Identities=22% Similarity=0.315 Sum_probs=36.9
Q ss_pred hhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHHHHHHHcCC
Q 014285 290 SGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQIIKATRKSGL 355 (427)
Q Consensus 290 ~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~~~A~~~gi 355 (427)
+.++++++ .+++||..+-.+.+..+++++++.+ +|.+.+-... +.....+.++++.+|.
T Consensus 67 ~~i~~i~~----~~~ipvi~~g~i~~~~~~~~~~~~G-ad~V~i~~~~--~~~~~~~~~~~~~~g~ 125 (253)
T 1h5y_A 67 DSVKRVAE----AVSIPVLVGGGVRSLEDATTLFRAG-ADKVSVNTAA--VRNPQLVALLAREFGS 125 (253)
T ss_dssp HHHHHHHH----HCSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHH--HHCTHHHHHHHHHHCG
T ss_pred HHHHHHHH----hcCCCEEEECCCCCHHHHHHHHHcC-CCEEEEChHH--hhCcHHHHHHHHHcCC
Confidence 33445543 5789998888888888998888876 7777764211 2222234455566553
No 420
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=21.25 E-value=2.4e+02 Score=27.15 Aligned_cols=139 Identities=10% Similarity=0.093 Sum_probs=75.0
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceEe
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLFE 281 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~iE 281 (427)
+-+.+++.+..+...+.||-.-=+.+- +.+.-.+.+++..+...-+-|.+ ++ -+.++... ..+.
T Consensus 3 ~~~~~~~~~ll~~A~~~~yAV~AfNv~-n~e~~~Avl~AAee~~sPvIlq~------s~-g~~~y~~g---~~~~----- 66 (349)
T 3elf_A 3 IATPEVYAEMLGQAKQNSYAFPAINCT-SSETVNAAIKGFADAGSDGIIQF------ST-GGAEFGSG---LGVK----- 66 (349)
T ss_dssp BCCHHHHHHHHHHHHHTTCCEEEEECC-SHHHHHHHHHHHHHTTCCEEEEE------CH-HHHHHHHC---TTTC-----
T ss_pred eecHHHHHHHHHHHHHcCceEEEEeeC-CHHHHHHHHHHHHHhCCCEEEEc------Ch-hHHhhcCc---chhh-----
Confidence 346777777777778888876555442 23344444555555432233332 22 22333221 1110
Q ss_pred CCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHH-----------HHHHHHcC---CCcEEEeCCCCcc----HHHH
Q 014285 282 QPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLND-----------VQKVMQEN---LASVVNIKLAKFG----VLGT 343 (427)
Q Consensus 282 qP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~-----------~~~ll~~~---a~~~i~lk~~~~G----i~~~ 343 (427)
..+. -...++.+.+.+.++.++||++-=.-..... ..+.+... .++.+.+|.|..= +..+
T Consensus 67 ~~v~--g~~~~a~~v~~~A~~~~VPVaLHlDHg~~~~ld~~~~~~l~~~~~~i~~~i~~GFtSVMiDgS~lp~eENi~~T 144 (349)
T 3elf_A 67 DMVT--GAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIA 144 (349)
T ss_dssp CHHH--HHHHHHHHHHHHHTTSSSCEEEEECCCCGGGGGGTHHHHHHHHHHHHHTTCCCSCSEEEECCTTSCHHHHHHHH
T ss_pred hhhh--hHHHHHHHHHHHHHHCCCCEEEECCCCCCcccchhhhhhHHHHHHHHHHHhhcCCCEEEecCCCCCHHHHHHHH
Confidence 0000 0011222222112367899998644333211 13344432 3899999999873 7779
Q ss_pred HHHHHHHHHcCCcEE
Q 014285 344 LQIIKATRKSGLHLM 358 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~ 358 (427)
+++.++|++.|+.+-
T Consensus 145 k~vv~~ah~~gvsVE 159 (349)
T 3elf_A 145 QELLKAAAAAKIILE 159 (349)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCeEE
Confidence 999999999999885
No 421
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=21.17 E-value=4.6e+02 Score=23.81 Aligned_cols=147 Identities=9% Similarity=0.040 Sum_probs=81.3
Q ss_pred CCCHHHHHHHHHHHhhcCCcEEEEeccC---C-------chhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhh
Q 014285 202 AVSPAEASELASKYCKLGFSTLKLNVGR---N-------ITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLN 271 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~Gf~~iKlKiG~---~-------~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~ 271 (427)
..|.+.+.+.++++.+.|..++|.-.-. . .++.++.++.+++. -++.+.-|.....+++.+.++ ++
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~-~Gl~~~te~~d~~~~~~l~~~---vd 108 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADE-YGLVTVTEVMDTRHVELVAKY---SD 108 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHH-HTCEEEEECCCGGGHHHHHHH---CS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHH-cCCcEEEeeCCHHhHHHHHhh---CC
Confidence 4578888899999999999988764311 1 14555555555542 246777777666665443333 11
Q ss_pred hCCCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCC-CHHHHHHHH----HcCCCcEEEeCC---CCcc-H--
Q 014285 272 DMGVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCR-SLNDVQKVM----QENLASVVNIKL---AKFG-V-- 340 (427)
Q Consensus 272 ~~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~-~~~~~~~ll----~~~a~~~i~lk~---~~~G-i-- 340 (427)
-+.+.. ..-.+..-+++++ +++.||-+---.. ++.++...+ ..+..+++.+.- +..+ -
T Consensus 109 ~~kIga------~~~~n~~ll~~~a-----~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~ 177 (262)
T 1zco_A 109 ILQIGA------RNSQNFELLKEVG-----KVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRF 177 (262)
T ss_dssp EEEECG------GGTTCHHHHHHHT-----TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSS
T ss_pred EEEECc------ccccCHHHHHHHH-----hcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChh
Confidence 111110 0112344455554 4788998877665 777775544 344567666652 1112 1
Q ss_pred -HHHHHHHHHHHHcCCcEEEcccC
Q 014285 341 -LGTLQIIKATRKSGLHLMIDGMI 363 (427)
Q Consensus 341 -~~~~~~~~~A~~~gi~~~~~s~~ 363 (427)
.....+..+.+..|++++.-+.-
T Consensus 178 ~v~L~ai~~lk~~~~~pVi~d~sH 201 (262)
T 1zco_A 178 TLDISAVPVVKELSHLPIIVDPSH 201 (262)
T ss_dssp BCCTTHHHHHHHHBSSCEEECSST
T ss_pred hcCHHHHHHHHhhhCCCEEEEcCC
Confidence 11233344555568998665543
No 422
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=21.11 E-value=4.1e+02 Score=24.84 Aligned_cols=73 Identities=11% Similarity=0.049 Sum_probs=47.6
Q ss_pred hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHc-----CCCcEEEeCCCCcc-HHHHHHHHHHHHHcCCcEEEccc
Q 014285 289 WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQE-----NLASVVNIKLAKFG-VLGTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 289 ~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~-----~a~~~i~lk~~~~G-i~~~~~~~~~A~~~gi~~~~~s~ 362 (427)
|+.|.+|.+ .+.==+.|=|.++...++++++. ..+.++|+.-+..- -.+-.+++..|+++||.++..+.
T Consensus 150 ~~al~~l~~-----~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a~sp 224 (346)
T 3n6q_A 150 ASALAHAVQ-----SGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTP 224 (346)
T ss_dssp HHHHHHHHH-----TTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEEBST
T ss_pred HHHHHHHHH-----cCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEEecc
Confidence 445555543 34333455577888888776542 34667888776653 11112689999999999999887
Q ss_pred Cchh
Q 014285 363 IETR 366 (427)
Q Consensus 363 ~es~ 366 (427)
+.+|
T Consensus 225 L~~G 228 (346)
T 3n6q_A 225 LAQG 228 (346)
T ss_dssp TGGG
T ss_pred ccCe
Confidence 7665
No 423
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=21.04 E-value=3.6e+02 Score=24.15 Aligned_cols=69 Identities=9% Similarity=0.021 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHhhh-CCCCCceEeCCCCCCChhhHHHHHHhhcccc-CCeEEecCCCCCHHHHHHHHHcCCCcEEEe
Q 014285 259 TSEEAVEVLGKLND-MGVIPVLFEQPVHRDDWSGLHDVSNFARDTY-GISVVADESCRSLNDVQKVMQENLASVVNI 333 (427)
Q Consensus 259 s~~~A~~~l~~L~~-~~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~-~iPIa~dE~~~~~~~~~~ll~~~a~~~i~l 333 (427)
+++.+..+.+.=++ ++++..|++--=...+.+-++++++ .+ .+|+..+=-+.+.++++++++ + +|.+++
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~~G~~~~~~~i~~i~~----~~~~~Pv~vGgGI~s~e~a~~~~~-g-Ad~VIV 217 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEYSGTYGNPELVAEVKK----VLDKARLFYGGGIDSREKAREMLR-Y-ADTIIV 217 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHH----HCSSSEEEEESCCCSHHHHHHHHH-H-SSEEEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeCCCCcchHHHHHHHHH----hCCCCCEEEEecCCCHHHHHHHHh-C-CCEEEE
Confidence 56666666666553 3334457776112345666677765 56 899999999999999999887 4 777665
No 424
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=21.01 E-value=4.6e+02 Score=23.61 Aligned_cols=113 Identities=9% Similarity=-0.016 Sum_probs=66.5
Q ss_pred HHHHHHhhcCCcEEEEeccCCchhhHHHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE---------
Q 014285 210 ELASKYCKLGFSTLKLNVGRNITADFDVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF--------- 280 (427)
Q Consensus 210 ~~~~~~~~~Gf~~iKlKiG~~~~~d~~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i--------- 280 (427)
+.++...+.|...+=+- ....++..+.++.+++.+-+.-+.+ |-.-+.+...+.++....+- |+
T Consensus 113 ~~~~~~~~aGadgii~~-d~~~e~~~~~~~~~~~~g~~~i~l~--~p~t~~~~i~~i~~~~~g~v----~~~s~~G~tG~ 185 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVA-DVPVEESAPFRQAALRHNIAPIFIC--PPNADDDLLRQVASYGRGYT----YLLSRSGVTGA 185 (268)
T ss_dssp HHHHHHHHHTCCEEEET-TCCGGGCHHHHHHHHHTTCEEECEE--CTTCCHHHHHHHHHHCCSCE----EEESSSSCCCS
T ss_pred HHHHHHHHcCCCEEEEc-CCCHHHHHHHHHHHHHcCCcEEEEE--CCCCCHHHHHHHHhhCCCcE----EEEecCCcCCC
Confidence 44556667788755543 2234455566778888764322222 22223444444444433331 33
Q ss_pred eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeC
Q 014285 281 EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIK 334 (427)
Q Consensus 281 EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk 334 (427)
..|+..+..+.++++++ .+++||+.|=-+.+.+++.+++..+ +|.+++-
T Consensus 186 ~~~~~~~~~~~i~~lr~----~~~~pi~vggGI~t~e~~~~~~~ag-AD~vVVG 234 (268)
T 1qop_A 186 ENRGALPLHHLIEKLKE----YHAAPALQGFGISSPEQVSAAVRAG-AAGAISG 234 (268)
T ss_dssp SSCC--CCHHHHHHHHH----TTCCCEEEESSCCSHHHHHHHHHTT-CSEEEEC
T ss_pred ccCCCchHHHHHHHHHh----ccCCcEEEECCCCCHHHHHHHHHcC-CCEEEEC
Confidence 22555555666777765 5689999998888899999977766 7887754
No 425
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=20.90 E-value=1.9e+02 Score=25.52 Aligned_cols=21 Identities=0% Similarity=0.115 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHcCCcEEEccc
Q 014285 342 GTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 342 ~~~~~~~~A~~~gi~~~~~s~ 362 (427)
...++++.|+++|+.+.++..
T Consensus 121 ~l~~l~~~a~~~gv~l~~E~~ 141 (272)
T 2q02_A 121 AIKRLSDLFARYDIQGLVEPL 141 (272)
T ss_dssp HHHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHHcCCEEEEEec
Confidence 345677888888888887653
No 426
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=20.85 E-value=4.1e+02 Score=22.97 Aligned_cols=113 Identities=10% Similarity=0.082 Sum_probs=63.1
Q ss_pred HHHHHhhcCCcEEEEeccCCchhhH-HHHHHHHHhCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCCCceE---------
Q 014285 211 LASKYCKLGFSTLKLNVGRNITADF-DVLQAIHAVHPHCSFILDANEGYTSEEAVEVLGKLNDMGVIPVLF--------- 280 (427)
Q Consensus 211 ~~~~~~~~Gf~~iKlKiG~~~~~d~-~~l~~ir~~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~~~~i--------- 280 (427)
.+++..+.|-..+-+..-.. ++.+ +.++.+++. ++...+|.=+..|++++.+..+. ++. +.+
T Consensus 75 ~~~~~~~aGad~i~vh~~~~-~~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~----g~d-~v~~~~~~~~~~ 146 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAH-IATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDL----GIT-QAIYHRSRDAEL 146 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSC-HHHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHT----TCC-EEEEECCHHHHH
T ss_pred HHHHHHhcCCCEEEEecCCC-HHHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHc----Ccc-ceeeeecccccc
Confidence 34556678998888886543 2222 345666665 46788888666788776665432 332 111
Q ss_pred -eCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCc
Q 014285 281 -EQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKF 338 (427)
Q Consensus 281 -EqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~ 338 (427)
-|++. .+.++++++.. ...+||..+=-+ +.....++++.+ +|++.+=-..+
T Consensus 147 ~g~~~~---~~~l~~i~~~~--~~~~pi~v~GGI-~~~~~~~~~~aG-Ad~vvvGsaI~ 198 (218)
T 3jr2_A 147 AGIGWT---TDDLDKMRQLS--ALGIELSITGGI-VPEDIYLFEGIK-TKTFIAGRALA 198 (218)
T ss_dssp HTCCSC---HHHHHHHHHHH--HTTCEEEEESSC-CGGGGGGGTTSC-EEEEEESGGGS
T ss_pred CCCcCC---HHHHHHHHHHh--CCCCCEEEECCC-CHHHHHHHHHcC-CCEEEEchhhc
Confidence 12222 23344443310 246888776555 566666676655 66766653333
No 427
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=20.67 E-value=5e+02 Score=23.93 Aligned_cols=147 Identities=14% Similarity=0.151 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|...+=+--.. +.++=.+.++.+.+ ..+.+.+.+=+ ++-+.++++++.+..++.|..
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv-g~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV-GCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-CCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-CCCCHHHHHHHHHHHHhCCCC
Confidence 56777888999999999887664321 33444556777776 45678887754 566889999999998887654
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccC-CeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYG-ISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGT 343 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~-iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~ 343 (427)
-..+=-|.- +.+ ++-++++++ .++ +||.+=. .-.+.+.+.++.+ .++++-+|-+- | +...
T Consensus 109 avlv~~P~y~~~s~~~l~~~f~~va~----a~~~lPiilYn~P~~tg~~l~~~~~~~La~--~pnIvgiK~s~-gd~~~~ 181 (303)
T 2wkj_A 109 AVSAVTPFYYPFSFEEHCDHYRAIID----SADGLPMVVYNIPALSGVKLTLDQINTLVT--LPGVGALXQTS-GDLYQM 181 (303)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HHTTCCEEEEECHHHHCCCCCHHHHHHHHT--STTEEEEEECC-CCHHHH
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHHH----hCCCCCEEEEeCccccCCCCCHHHHHHHhc--CCCEEEEeCCC-CCHHHH
Confidence 223444542 222 223345554 577 9998743 2356666777764 48899999776 5 7776
Q ss_pred HHHHHHHHHcCCcEEEc
Q 014285 344 LQIIKATRKSGLHLMID 360 (427)
Q Consensus 344 ~~~~~~A~~~gi~~~~~ 360 (427)
.++++. .-++.+..+
T Consensus 182 ~~~~~~--~~~f~v~~G 196 (303)
T 2wkj_A 182 EQIRRE--HPDLVLYNG 196 (303)
T ss_dssp HHHHHH--CTTCEEEEC
T ss_pred HHHHHh--CCCeEEEeC
Confidence 666653 225555554
No 428
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=20.46 E-value=5e+02 Score=23.78 Aligned_cols=149 Identities=13% Similarity=0.158 Sum_probs=92.8
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEec--cC----CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhhhCCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNV--GR----NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLNDMGVI 276 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKi--G~----~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l~ 276 (427)
|.+.+.+.++.+++.|.+.+=+-- |- +.++=.+.++.+.+ ....+.+.+=+ ++-+.+++++..+..++.|..
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-g~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA-GSNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-CCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-CCccHHHHHHHHHHHHHcCCC
Confidence 567778888889999988765432 21 33444556677776 44567776555 456789999999999888765
Q ss_pred CceEeCCCC--CCC---hhhHHHHHHhhccccCCeEEecC------CCCCHHHHHHHHHcCCCcEEEeCCCCcc-HHHHH
Q 014285 277 PVLFEQPVH--RDD---WSGLHDVSNFARDTYGISVVADE------SCRSLNDVQKVMQENLASVVNIKLAKFG-VLGTL 344 (427)
Q Consensus 277 ~~~iEqP~~--~~d---~~~~~~L~~~~r~~~~iPIa~dE------~~~~~~~~~~ll~~~a~~~i~lk~~~~G-i~~~~ 344 (427)
-..+=-|.- +.+ .+-++++++ .+++||.+=. .-.+.+.+.++.+. .++++-+|-+- | +....
T Consensus 98 avlv~~P~y~~~s~~~l~~~f~~ia~----a~~lPiilYn~P~~tg~~l~~~~~~~La~~-~pnIvgiK~s~-gd~~~~~ 171 (292)
T 2vc6_A 98 GVLIVSPYYNKPTQEGIYQHFKAIDA----ASTIPIIVYNIPGRSAIEIHVETLARIFED-CPNVKGVXDAT-GNLLRPS 171 (292)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHHH----HCSSCEEEEECHHHHSCCCCHHHHHHHHHH-CTTEEEEEECS-CCTHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHH----hCCCCEEEEeCccccCcCCCHHHHHHHHhh-CCCEEEEecCC-CCHHHHH
Confidence 234445542 222 123345554 5789998732 23566677787752 27888898765 5 66666
Q ss_pred HHHHHHHHcCCcEEEc
Q 014285 345 QIIKATRKSGLHLMID 360 (427)
Q Consensus 345 ~~~~~A~~~gi~~~~~ 360 (427)
++++... -++.+..+
T Consensus 172 ~~~~~~~-~~f~v~~G 186 (292)
T 2vc6_A 172 LERMACG-EDFNLLTG 186 (292)
T ss_dssp HHHHHSC-TTSEEEES
T ss_pred HHHHHcC-CCEEEEEC
Confidence 5554321 24666544
No 429
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=20.36 E-value=5e+02 Score=23.81 Aligned_cols=119 Identities=16% Similarity=0.190 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHhhhCCCCCceEeCCCCCCC---------hhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCc
Q 014285 259 TSEEAVEVLGKLNDMGVIPVLFEQPVHRDD---------WSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLAS 329 (427)
Q Consensus 259 s~~~A~~~l~~L~~~~l~~~~iEqP~~~~d---------~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~ 329 (427)
+.+.|+++++++++.+.. ..-=|-.++.. .++++.|.+..+ +.++|++. +..+..++..+.+. ++
T Consensus 50 ~~e~a~~~a~~~k~~ga~-~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~-~~Gl~~~t--e~~d~~~~~~l~~~--vd 123 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAH-MLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGD-EAGLPVVT--EVLDPRHVETVSRY--AD 123 (276)
T ss_dssp CHHHHHHHHHHHHHHTCS-EEECBSSCCCSSTTSCCCCTHHHHHHHHHHHH-HHTCCEEE--ECCCGGGHHHHHHH--CS
T ss_pred CHHHHHHHHHHHHHhCCC-EEEeEEEeCCCChhhhcCCCHHHHHHHHHHHH-HcCCcEEE--ecCCHHHHHHHHHh--CC
Q ss_pred EEEeCCCCccHHHHHHHHHHHHHcCCcEEEcccCc---hhHHHHHHHHHHhhcCCcceec
Q 014285 330 VVNIKLAKFGVLGTLQIIKATRKSGLHLMIDGMIE---TRLATGFALHLAAGLGCIKYVN 386 (427)
Q Consensus 330 ~i~lk~~~~Gi~~~~~~~~~A~~~gi~~~~~s~~e---s~ig~~a~~hlaaal~~~~~~e 386 (427)
++++-. +-..-..+.+.+.+.|.++.+..-.. ..+-.++..-...+-++..+++
T Consensus 124 ~~kIgs---~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~ 180 (276)
T 1vs1_A 124 MLQIGA---RNMQNFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVE 180 (276)
T ss_dssp EEEECG---GGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEECc---ccccCHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
No 430
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.26 E-value=4.9e+02 Score=23.60 Aligned_cols=21 Identities=19% Similarity=0.069 Sum_probs=10.0
Q ss_pred hHHHHHHHHHhCCCcEEEEeCCCC
Q 014285 234 DFDVLQAIHAVHPHCSFILDANEG 257 (427)
Q Consensus 234 d~~~l~~ir~~~~~~~L~vDAN~~ 257 (427)
-+++.+...+.|-+ .+|-|++
T Consensus 27 a~~~a~~~v~~GAd---iIDIg~g 47 (262)
T 1f6y_A 27 VQEWARRQEEGGAR---ALDLNVG 47 (262)
T ss_dssp HHHHHHHHHHHTCS---EEEEBCC
T ss_pred HHHHHHHHHHCCCc---EEEECCC
Confidence 33444444444544 3566654
No 431
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.24 E-value=5.3e+02 Score=24.01 Aligned_cols=57 Identities=16% Similarity=0.167 Sum_probs=31.0
Q ss_pred cCCeEEecCCCCCHHHHHHHHHc-CCCcEEEeCCCCc-cHHHHHHHHHHHHHcCCcEEEccc
Q 014285 303 YGISVVADESCRSLNDVQKVMQE-NLASVVNIKLAKF-GVLGTLQIIKATRKSGLHLMIDGM 362 (427)
Q Consensus 303 ~~iPIa~dE~~~~~~~~~~ll~~-~a~~~i~lk~~~~-Gi~~~~~~~~~A~~~gi~~~~~s~ 362 (427)
+++||+.|=+ ...-++..++. ...++|| +.+-- |=....+++.++.++|.++++-++
T Consensus 83 ~~vpisIDT~--~~~V~eaaL~~~~Ga~iIN-dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 83 ARVPVMIDSS--KWEVIEAGLKCLQGKSIVN-SISLKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp HTSCEEEECS--CHHHHHHHHHHCSSCCEEE-EECSTTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred CCCeEEEeCC--CHHHHHHHHHhcCCCCEEE-eCCcccCChhHHHHHHHHHHhCCeEEEEee
Confidence 5678877743 44445666762 1244433 33221 212344677777888887765443
No 432
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=20.09 E-value=88 Score=26.83 Aligned_cols=80 Identities=20% Similarity=0.237 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHhhc--C-CcEEEEeccC------CchhhHHHH-HHHHHhCCC----cEE--E-EeCCCCCCHHHHHH
Q 014285 203 VSPAEASELASKYCKL--G-FSTLKLNVGR------NITADFDVL-QAIHAVHPH----CSF--I-LDANEGYTSEEAVE 265 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~--G-f~~iKlKiG~------~~~~d~~~l-~~ir~~~~~----~~L--~-vDAN~~~s~~~A~~ 265 (427)
-+|+++.+.++.+... | |+.+|++-|. +.+++..++ +.+.+..+. +.- . +-.+-+|+..-|.+
T Consensus 60 ISp~Dl~~A~~~l~~Lg~~~~~l~~~~sg~~V~~~~~~d~~~~~il~~~~~~~g~d~~~vt~~~~~la~~~~ws~~~a~e 139 (169)
T 1u5t_B 60 ISPMEMREACERFEHLGLNELKLVKVNKRILCVTSEKFDVVKEKLVDLIGDNPGSDLLRLTQILSSNNSKSNWTLGILME 139 (169)
T ss_dssp CCHHHHHHHHTTTGGGTCCSCEEEEETTTEEEEESSCSHHHHHHHHHHHHHSCSBCHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCCCeEEEEEECCeeEEEeCCChhHHHHHHHHHHHhcCCCCcccccHHHHHHHHHhCCCHHHHHH
Confidence 4799998887777554 6 7777776432 233333444 344333233 222 3 55778999999999
Q ss_pred HHHHhhhCCCCCceEeCCC
Q 014285 266 VLGKLNDMGVIPVLFEQPV 284 (427)
Q Consensus 266 ~l~~L~~~~l~~~~iEqP~ 284 (427)
.++.+.+-|+ .|+.+-.
T Consensus 140 ~L~~~e~~G~--l~~D~~~ 156 (169)
T 1u5t_B 140 VLQNCVDEGD--LLIDKQL 156 (169)
T ss_dssp HHHHHHHHTS--EEEEECS
T ss_pred HHHHHHHcCC--EEEECCC
Confidence 9999998887 5998644
No 433
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=20.07 E-value=44 Score=30.00 Aligned_cols=80 Identities=15% Similarity=0.025 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHHhhc--CCcEEEEeccC--------CchhhHHHHHHHHH-hCCCcEEEEeCCCCCCHHHHHHHHHHhh
Q 014285 203 VSPAEASELASKYCKL--GFSTLKLNVGR--------NITADFDVLQAIHA-VHPHCSFILDANEGYTSEEAVEVLGKLN 271 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~--Gf~~iKlKiG~--------~~~~d~~~l~~ir~-~~~~~~L~vDAN~~~s~~~A~~~l~~L~ 271 (427)
-+|+++.+.++.+... ||+.+|++=|. ..+.|...+-.+-+ .+.=-...+=.|-+|+..-|.+.++.+.
T Consensus 114 VSp~Dl~~A~~~l~~Lg~~~~l~~~~sg~~vvqs~~~~~~~~~~~il~~~~~~g~vt~~~la~~l~ws~~~a~e~L~~~e 193 (218)
T 3cuq_B 114 LSPEDLVNACKMLEALKLPLRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAE 193 (218)
T ss_dssp CCHHHHHHHHHTTTTTTCSEEEEECTTSBEEEEETTCCGGGGHHHHHHHHHHTSCBCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEECCCcEEEEcCCCchHHHHHHHHHHHHHCCCcCHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4799998888877654 56666665342 34456666644333 3321111122244899999999999999
Q ss_pred hCCCCCceEeCCC
Q 014285 272 DMGVIPVLFEQPV 284 (427)
Q Consensus 272 ~~~l~~~~iEqP~ 284 (427)
.-|+ .|+.+..
T Consensus 194 ~~G~--l~~D~~~ 204 (218)
T 3cuq_B 194 KMGH--LCRDDSV 204 (218)
T ss_dssp HTTS--EEEEESS
T ss_pred HcCC--EEEECCC
Confidence 9997 5999854
No 434
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=20.05 E-value=4.6e+02 Score=23.19 Aligned_cols=128 Identities=10% Similarity=0.135 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEeccC------CchhhHHHHHHHHHhC--CCcEEEEeCCCCCCHHHHHHHHHHhhhCCC
Q 014285 204 SPAEASELASKYCKLGFSTLKLNVGR------NITADFDVLQAIHAVH--PHCSFILDANEGYTSEEAVEVLGKLNDMGV 275 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~Gf~~iKlKiG~------~~~~d~~~l~~ir~~~--~~~~L~vDAN~~~s~~~A~~~l~~L~~~~l 275 (427)
+.+....++++.++.|-..+-+-+.. +.+.-.+-++++++.- ..+++.+.. +-++.++-....+...+.+.
T Consensus 69 ~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet-~~l~~e~i~~a~~ia~eaGA 147 (220)
T 1ub3_A 69 EKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILET-GYFSPEEIARLAEAAIRGGA 147 (220)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCG-GGSCHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEec-CCCCHHHHHHHHHHHHHhCC
Confidence 44445677888899999999887642 3344456677777743 345656654 55787775555555567776
Q ss_pred CCceEeCCC--CC-----CChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccHHHHHHHH
Q 014285 276 IPVLFEQPV--HR-----DDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGVLGTLQII 347 (427)
Q Consensus 276 ~~~~iEqP~--~~-----~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi~~~~~~~ 347 (427)
. ||=-.. .+ +|.+.|++... .+.++-++.|-. +..++.++++.++- ++|.+..+++.
T Consensus 148 D--fVKTsTGf~~~gat~~dv~~m~~~vg---~~v~VkaaGGir--t~~~al~~i~aGa~--------RiG~S~g~~I~ 211 (220)
T 1ub3_A 148 D--FLKTSTGFGPRGASLEDVALLVRVAQ---GRAQVKAAGGIR--DRETALRMLKAGAS--------RLGTSSGVALV 211 (220)
T ss_dssp S--EEECCCSSSSCCCCHHHHHHHHHHHT---TSSEEEEESSCC--SHHHHHHHHHTTCS--------EEEETTHHHHH
T ss_pred C--EEEeCCCCCCCCCCHHHHHHHHHhhC---CCCeEEEECCCC--CHHHHHHHHHCCCc--------ccchhHHHHHH
Confidence 4 887774 22 25566665542 234444555544 88889999987653 55744444444
No 435
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=20.01 E-value=4.3e+02 Score=29.71 Aligned_cols=138 Identities=11% Similarity=0.005 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEeccC-CchhhHHHHHHHHHhCCCcEEEEeCC--------CCCCHHHHHHHHHHhhhC
Q 014285 203 VSPAEASELASKYCKLGFSTLKLNVGR-NITADFDVLQAIHAVHPHCSFILDAN--------EGYTSEEAVEVLGKLNDM 273 (427)
Q Consensus 203 ~~~~~~~~~~~~~~~~Gf~~iKlKiG~-~~~~d~~~l~~ir~~~~~~~L~vDAN--------~~~s~~~A~~~l~~L~~~ 273 (427)
....-..+.++...+.|...+.+-... +++.=...++.+++.+..++..+-.- +.++++.++++++++.+.
T Consensus 642 ~~~~~~~~~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~ 721 (1165)
T 2qf7_A 642 YPDNVVKYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKA 721 (1165)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHc
Q ss_pred CCCCceEeCCCCCCChhhHHHHHHhhccccCCeEEecCCCCCHHHHHHHHHcCCCcEEEeCCCCccH
Q 014285 274 GVIPVLFEQPVHRDDWSGLHDVSNFARDTYGISVVADESCRSLNDVQKVMQENLASVVNIKLAKFGV 340 (427)
Q Consensus 274 ~l~~~~iEqP~~~~d~~~~~~L~~~~r~~~~iPIa~dE~~~~~~~~~~ll~~~a~~~i~lk~~~~Gi 340 (427)
+.+...|=+-.---......+|.+.+++..++||...=+-..=-.+...+.+....+-++|.+..|+
T Consensus 722 Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~Gl 788 (1165)
T 2qf7_A 722 GAHIIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDAL 788 (1165)
T ss_dssp TCSEEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGG
T ss_pred CCCEEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHhCCCEEEeccccc
Done!