Query 014286
Match_columns 427
No_of_seqs 548 out of 1550
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 03:39:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014286.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014286hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 3.1E-36 6.7E-41 272.0 36.0 379 46-425 6-471 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 1E-33 2.2E-38 272.2 26.5 357 45-415 161-740 (742)
3 PRK10077 xylE D-xylose transpo 100.0 3.2E-32 6.9E-37 258.1 34.9 369 47-425 8-474 (479)
4 KOG0254 Predicted transporter 100.0 1.5E-31 3.4E-36 253.6 33.2 379 47-425 41-500 (513)
5 TIGR00887 2A0109 phosphate:H+ 100.0 5.8E-32 1.3E-36 256.6 27.1 370 44-421 9-501 (502)
6 TIGR00879 SP MFS transporter, 100.0 7.5E-31 1.6E-35 249.2 32.5 371 47-417 24-479 (481)
7 COG2814 AraJ Arabinose efflux 100.0 8.5E-31 1.8E-35 229.8 28.7 341 49-409 11-387 (394)
8 TIGR00898 2A0119 cation transp 100.0 1.9E-30 4.1E-35 247.4 23.9 332 72-417 110-503 (505)
9 PRK09705 cynX putative cyanate 100.0 2.1E-29 4.5E-34 231.7 28.8 344 50-415 9-388 (393)
10 PRK09556 uhpT sugar phosphate 100.0 1.3E-29 2.8E-34 238.5 26.7 346 47-406 25-447 (467)
11 PF00083 Sugar_tr: Sugar (and 100.0 9.3E-36 2E-40 280.0 -15.0 367 56-422 5-450 (451)
12 PRK10642 proline/glycine betai 100.0 8.1E-29 1.8E-33 234.2 30.4 349 52-413 17-434 (490)
13 PRK12307 putative sialic acid 100.0 1.3E-28 2.9E-33 229.8 28.9 327 48-389 15-389 (426)
14 PRK03545 putative arabinose tr 100.0 8.5E-29 1.8E-33 228.0 26.5 337 53-408 11-380 (390)
15 PRK11551 putative 3-hydroxyphe 100.0 5.2E-29 1.1E-33 231.0 23.2 344 47-407 11-395 (406)
16 PRK10406 alpha-ketoglutarate t 100.0 3.6E-28 7.9E-33 226.5 26.8 345 49-406 20-422 (432)
17 TIGR00890 2A0111 Oxalate/Forma 100.0 1.5E-28 3.2E-33 226.0 22.2 317 67-401 19-375 (377)
18 KOG0252 Inorganic phosphate tr 100.0 2.6E-29 5.6E-34 218.4 15.3 372 46-423 36-512 (538)
19 PRK11663 regulatory protein Uh 100.0 4.4E-28 9.5E-33 226.0 24.8 351 51-414 23-430 (434)
20 COG2271 UhpC Sugar phosphate p 100.0 1.2E-28 2.5E-33 213.3 18.6 351 46-409 24-435 (448)
21 PRK05122 major facilitator sup 100.0 1.1E-27 2.4E-32 221.6 25.5 334 53-407 17-388 (399)
22 PRK03633 putative MFS family t 100.0 3.8E-27 8.3E-32 216.3 28.5 330 53-404 8-368 (381)
23 KOG0253 Synaptic vesicle trans 100.0 2.3E-28 4.9E-33 206.2 17.9 357 46-416 73-527 (528)
24 PRK15034 nitrate/nitrite trans 100.0 9.1E-27 2E-31 212.0 28.0 346 50-410 33-456 (462)
25 TIGR00891 2A0112 putative sial 100.0 2.7E-27 5.8E-32 219.8 24.3 330 48-392 9-400 (405)
26 PRK15075 citrate-proton sympor 100.0 6.1E-27 1.3E-31 218.4 26.5 324 52-387 16-398 (434)
27 PRK12382 putative transporter; 100.0 8.6E-27 1.9E-31 215.1 26.3 330 56-407 20-388 (392)
28 TIGR02332 HpaX 4-hydroxyphenyl 100.0 7E-27 1.5E-31 216.1 25.6 334 48-397 5-410 (412)
29 PRK10091 MFS transport protein 100.0 2.3E-26 5E-31 211.1 27.0 340 53-410 5-378 (382)
30 PRK11273 glpT sn-glycerol-3-ph 100.0 9.9E-27 2.2E-31 218.0 25.1 341 49-407 27-434 (452)
31 PRK09952 shikimate transporter 100.0 7.7E-26 1.7E-30 210.9 30.6 346 50-410 21-434 (438)
32 PRK14995 methyl viologen resis 100.0 7.6E-27 1.7E-31 220.9 24.2 323 49-383 4-413 (495)
33 PRK10213 nepI ribonucleoside t 100.0 6.6E-26 1.4E-30 208.3 29.2 334 52-404 21-387 (394)
34 PRK03699 putative transporter; 100.0 1.4E-26 3E-31 213.5 24.4 333 52-405 8-377 (394)
35 PRK03893 putative sialic acid 100.0 1.1E-26 2.5E-31 221.1 23.5 339 48-399 17-444 (496)
36 PRK15402 multidrug efflux syst 100.0 1.6E-26 3.4E-31 214.2 21.9 340 46-400 8-387 (406)
37 PRK10504 putative transporter; 99.9 2.2E-26 4.8E-31 217.5 22.8 322 53-387 12-419 (471)
38 PRK10489 enterobactin exporter 99.9 9.8E-27 2.1E-31 216.3 18.4 342 64-425 30-416 (417)
39 TIGR00893 2A0114 d-galactonate 99.9 2.3E-26 4.9E-31 213.0 20.2 337 60-405 3-396 (399)
40 TIGR00903 2A0129 major facilit 99.9 1.2E-25 2.5E-30 203.6 23.2 315 68-405 8-362 (368)
41 TIGR00892 2A0113 monocarboxyla 99.9 2.1E-25 4.5E-30 208.7 24.2 333 50-402 18-415 (455)
42 PRK09874 drug efflux system pr 99.9 4.9E-25 1.1E-29 204.8 26.5 338 55-409 18-399 (408)
43 PRK10133 L-fucose transporter; 99.9 3.7E-25 8E-30 205.5 24.3 333 50-403 25-428 (438)
44 TIGR00897 2A0118 polyol permea 99.9 5.3E-25 1.1E-29 203.4 25.2 322 69-406 31-399 (402)
45 COG2223 NarK Nitrate/nitrite t 99.9 2.8E-25 6.1E-30 192.8 21.4 343 53-410 16-403 (417)
46 PLN00028 nitrate transmembrane 99.9 3.2E-25 6.8E-30 208.6 20.4 335 53-406 38-431 (476)
47 KOG0255 Synaptic vesicle trans 99.9 4.4E-24 9.6E-29 204.0 27.8 349 57-420 91-504 (521)
48 TIGR00889 2A0110 nucleoside tr 99.9 1.9E-24 4.1E-29 199.9 23.1 343 60-413 11-407 (418)
49 PRK11043 putative transporter; 99.9 5.9E-24 1.3E-28 196.8 25.8 314 60-388 15-362 (401)
50 TIGR00711 efflux_EmrB drug res 99.9 6.8E-25 1.5E-29 208.5 20.0 318 52-384 3-411 (485)
51 TIGR00895 2A0115 benzoate tran 99.9 7E-24 1.5E-28 196.4 24.6 320 49-380 15-397 (398)
52 TIGR00710 efflux_Bcr_CflA drug 99.9 1.8E-24 3.8E-29 199.5 20.1 312 56-382 10-360 (385)
53 TIGR00712 glpT glycerol-3-phos 99.9 2.2E-24 4.8E-29 201.5 20.8 348 49-412 25-437 (438)
54 TIGR00900 2A0121 H+ Antiporter 99.9 6.9E-25 1.5E-29 200.7 17.1 312 57-385 5-365 (365)
55 KOG1330 Sugar transporter/spin 99.9 8.2E-25 1.8E-29 191.4 16.4 333 45-387 27-417 (493)
56 TIGR00899 2A0120 sugar efflux 99.9 9.2E-24 2E-28 194.0 23.6 326 59-404 5-370 (375)
57 TIGR00881 2A0104 phosphoglycer 99.9 1.9E-24 4.2E-29 198.8 19.1 322 59-390 3-379 (379)
58 TIGR00894 2A0114euk Na(+)-depe 99.9 4E-24 8.7E-29 201.6 20.6 346 47-405 15-447 (465)
59 PRK15403 multidrug efflux syst 99.9 9.9E-24 2.1E-28 195.1 22.7 341 47-403 12-392 (413)
60 PRK11195 lysophospholipid tran 99.9 1.7E-23 3.7E-28 192.3 23.3 328 57-408 9-380 (393)
61 PRK10473 multidrug efflux syst 99.9 3E-23 6.5E-28 191.5 24.8 316 58-397 10-363 (392)
62 cd06174 MFS The Major Facilita 99.9 3.3E-23 7.1E-28 188.5 24.7 328 55-405 3-349 (352)
63 TIGR00883 2A0106 metabolite-pr 99.9 1.3E-23 2.9E-28 194.2 21.5 324 61-396 3-389 (394)
64 PRK10054 putative transporter; 99.9 1.8E-23 3.9E-28 192.3 21.3 331 59-405 15-381 (395)
65 TIGR00896 CynX cyanate transpo 99.9 6.5E-23 1.4E-27 186.6 24.3 299 66-386 15-351 (355)
66 PRK09528 lacY galactoside perm 99.9 5.8E-23 1.3E-27 191.1 23.9 332 68-410 27-405 (420)
67 TIGR00902 2A0127 phenyl propri 99.9 9.3E-23 2E-27 187.1 24.1 326 56-403 9-374 (382)
68 TIGR00885 fucP L-fucose:H+ sym 99.9 2.8E-22 6E-27 184.7 24.6 326 53-396 5-400 (410)
69 PRK11652 emrD multidrug resist 99.9 6E-23 1.3E-27 189.6 20.3 315 52-383 9-360 (394)
70 PF07690 MFS_1: Major Facilita 99.9 1.5E-23 3.3E-28 190.8 14.9 302 57-374 2-352 (352)
71 PRK11646 multidrug resistance 99.9 1.9E-22 4.1E-27 185.8 22.0 318 68-404 27-384 (400)
72 PRK11102 bicyclomycin/multidru 99.9 6.9E-23 1.5E-27 188.2 18.6 298 65-377 5-343 (377)
73 TIGR00882 2A0105 oligosacchari 99.9 2.1E-21 4.6E-26 179.3 25.4 337 58-405 9-392 (396)
74 PRK11010 ampG muropeptide tran 99.9 1.4E-21 3.1E-26 184.1 21.8 336 56-407 17-402 (491)
75 COG0738 FucP Fucose permease [ 99.9 1.4E-21 3E-26 168.7 19.1 327 53-401 15-402 (422)
76 PRK11128 putative 3-phenylprop 99.9 5.1E-21 1.1E-25 175.7 23.6 320 61-402 14-373 (382)
77 PRK15011 sugar efflux transpor 99.9 1.4E-20 3E-25 173.5 24.3 326 60-405 24-388 (393)
78 KOG3764 Vesicular amine transp 99.9 9E-23 1.9E-27 174.8 8.2 312 83-406 101-452 (464)
79 TIGR00886 2A0108 nitrite extru 99.9 1.2E-21 2.6E-26 179.3 15.9 298 55-369 5-365 (366)
80 PF05977 MFS_3: Transmembrane 99.9 9.8E-21 2.1E-25 177.0 21.7 319 68-405 27-391 (524)
81 KOG2532 Permease of the major 99.9 4.9E-21 1.1E-25 175.9 18.1 316 78-407 65-446 (466)
82 PRK08633 2-acyl-glycerophospho 99.9 1.3E-20 2.9E-25 197.1 23.3 312 71-399 30-401 (1146)
83 KOG2504 Monocarboxylate transp 99.9 4.1E-20 8.8E-25 172.0 23.5 341 48-406 43-474 (509)
84 COG2807 CynX Cyanate permease 99.9 4.6E-19 9.9E-24 150.9 24.5 336 52-405 13-382 (395)
85 PRK11902 ampG muropeptide tran 99.9 7E-20 1.5E-24 169.4 21.6 330 57-406 5-388 (402)
86 KOG2533 Permease of the major 99.9 4.6E-20 1E-24 169.8 19.4 246 45-300 39-354 (495)
87 KOG4686 Predicted sugar transp 99.9 1.2E-20 2.6E-25 154.2 13.0 347 45-406 38-441 (459)
88 PRK06814 acylglycerophosphoeth 99.8 7E-20 1.5E-24 191.1 21.5 338 54-401 18-415 (1140)
89 PF06609 TRI12: Fungal trichot 99.8 5E-19 1.1E-23 164.9 24.0 320 48-381 41-465 (599)
90 PF03825 Nuc_H_symport: Nucleo 99.8 3.2E-19 7E-24 162.1 21.4 340 60-410 11-397 (400)
91 TIGR00792 gph sugar (Glycoside 99.8 1.1E-19 2.3E-24 170.5 18.5 301 73-387 22-384 (437)
92 TIGR00924 yjdL_sub1_fam amino 99.8 3.9E-18 8.5E-23 160.1 23.5 352 55-409 14-469 (475)
93 TIGR02718 sider_RhtX_FptX side 99.8 7.6E-18 1.6E-22 155.3 24.6 339 53-403 3-386 (390)
94 PRK10207 dipeptide/tripeptide 99.8 1.5E-18 3.2E-23 163.0 19.4 344 57-407 20-475 (489)
95 TIGR00805 oat sodium-independe 99.8 6.4E-18 1.4E-22 163.0 16.4 114 53-168 35-199 (633)
96 PF01306 LacY_symp: LacY proto 99.8 1.2E-18 2.6E-23 155.3 9.6 340 60-414 16-406 (412)
97 PTZ00207 hypothetical protein; 99.8 7.9E-17 1.7E-21 151.4 21.7 323 71-411 47-555 (591)
98 TIGR00901 2A0125 AmpG-related 99.8 6.2E-17 1.3E-21 147.5 18.6 291 67-367 4-355 (356)
99 TIGR00806 rfc RFC reduced fola 99.7 7E-17 1.5E-21 144.9 17.6 334 53-404 29-444 (511)
100 PRK09584 tppB putative tripept 99.7 1.5E-16 3.2E-21 150.3 18.7 97 70-168 40-139 (500)
101 PRK09848 glucuronide transport 99.7 1.5E-16 3.2E-21 149.4 16.4 299 75-386 33-391 (448)
102 KOG2615 Permease of the major 99.7 3.1E-16 6.6E-21 134.3 15.2 286 88-383 68-414 (451)
103 PRK09669 putative symporter Ya 99.7 6.7E-16 1.5E-20 144.7 16.9 301 73-386 32-391 (444)
104 TIGR00788 fbt folate/biopterin 99.7 3.3E-15 7.2E-20 140.0 18.2 334 53-396 28-431 (468)
105 PRK10429 melibiose:sodium symp 99.7 5.4E-15 1.2E-19 139.5 18.5 313 64-386 19-396 (473)
106 TIGR01301 GPH_sucrose GPH fami 99.7 4.3E-14 9.4E-19 130.4 23.3 343 61-413 14-476 (477)
107 PF13347 MFS_2: MFS/sugar tran 99.7 2.6E-14 5.7E-19 133.3 21.9 305 73-387 24-388 (428)
108 COG2270 Permeases of the major 99.6 2E-13 4.4E-18 119.5 24.1 302 86-404 56-425 (438)
109 PF11700 ATG22: Vacuole efflux 99.6 2.4E-13 5.3E-18 126.2 25.6 317 90-413 72-472 (477)
110 COG2211 MelB Na+/melibiose sym 99.6 5.4E-14 1.2E-18 127.0 18.3 302 76-386 38-399 (467)
111 KOG2563 Permease of the major 99.6 7.2E-13 1.6E-17 116.7 20.9 355 44-413 38-455 (480)
112 PRK11462 putative transporter; 99.6 3.4E-13 7.3E-18 126.4 20.2 303 74-386 33-390 (460)
113 PRK15462 dipeptide/tripeptide 99.6 1.6E-12 3.5E-17 120.6 23.0 97 70-168 28-127 (493)
114 COG2814 AraJ Arabinose efflux 99.5 3.6E-13 7.7E-18 119.2 17.4 167 234-409 20-189 (394)
115 KOG2325 Predicted transporter/ 99.5 7.7E-14 1.7E-18 126.3 12.4 108 52-159 35-148 (488)
116 COG2271 UhpC Sugar phosphate p 99.5 1.7E-13 3.8E-18 119.8 13.5 176 227-411 29-209 (448)
117 PRK11663 regulatory protein Uh 99.5 4.3E-13 9.4E-18 125.3 17.3 157 245-410 41-200 (434)
118 PRK10054 putative transporter; 99.5 9.9E-13 2.1E-17 121.2 18.7 156 246-411 27-185 (395)
119 PRK03545 putative arabinose tr 99.5 1.3E-12 2.7E-17 120.7 18.3 155 248-411 30-187 (390)
120 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.2E-12 2.5E-17 121.5 18.0 170 234-412 15-193 (412)
121 TIGR00710 efflux_Bcr_CflA drug 99.5 7.6E-13 1.6E-17 122.0 16.5 161 244-413 22-185 (385)
122 PRK10213 nepI ribonucleoside t 99.5 1.8E-12 3.9E-17 119.5 18.0 154 249-411 42-198 (394)
123 TIGR00895 2A0115 benzoate tran 99.5 6.8E-13 1.5E-17 122.9 14.6 160 243-411 33-195 (398)
124 PRK14995 methyl viologen resis 99.5 1.4E-12 3E-17 124.0 16.0 172 231-411 10-185 (495)
125 TIGR00893 2A0114 d-galactonate 99.5 1.1E-12 2.5E-17 121.3 14.3 158 245-411 12-172 (399)
126 TIGR00891 2A0112 putative sial 99.5 4.3E-12 9.2E-17 117.9 17.8 160 242-411 27-191 (405)
127 PRK11551 putative 3-hydroxyphe 99.4 1.9E-12 4.1E-17 120.2 15.0 160 243-411 31-193 (406)
128 PRK10473 multidrug efflux syst 99.4 2.4E-12 5.1E-17 119.0 15.4 162 242-412 18-182 (392)
129 PRK15403 multidrug efflux syst 99.4 3.7E-12 8E-17 118.1 16.4 154 250-412 39-195 (413)
130 PRK11273 glpT sn-glycerol-3-ph 99.4 5.6E-12 1.2E-16 118.5 17.9 160 246-411 48-211 (452)
131 TIGR00712 glpT glycerol-3-phos 99.4 3.6E-12 7.8E-17 119.4 16.0 159 247-411 47-209 (438)
132 PRK10489 enterobactin exporter 99.4 6.7E-12 1.5E-16 116.9 17.6 187 215-410 9-198 (417)
133 PLN00028 nitrate transmembrane 99.4 1.6E-11 3.5E-16 116.0 20.3 178 220-408 30-219 (476)
134 PRK10091 MFS transport protein 99.4 4.6E-12 1E-16 116.5 16.1 159 245-412 21-182 (382)
135 TIGR00711 efflux_EmrB drug res 99.4 1.7E-12 3.6E-17 123.7 13.5 162 242-412 17-181 (485)
136 PRK03699 putative transporter; 99.4 7.3E-12 1.6E-16 115.7 17.3 153 243-404 23-179 (394)
137 TIGR00900 2A0121 H+ Antiporter 99.4 8.9E-12 1.9E-16 114.0 17.1 156 246-405 18-176 (365)
138 PRK15402 multidrug efflux syst 99.4 1.4E-11 3E-16 114.4 17.9 156 248-412 34-192 (406)
139 TIGR01299 synapt_SV2 synaptic 99.4 1.1E-11 2.3E-16 120.8 17.4 158 244-411 184-357 (742)
140 PRK15462 dipeptide/tripeptide 99.4 1.7E-11 3.7E-16 113.8 18.0 149 248-404 30-185 (493)
141 PRK11646 multidrug resistance 99.4 1.6E-11 3.5E-16 113.4 17.8 157 244-410 28-187 (400)
142 PRK10504 putative transporter; 99.4 1.1E-11 2.5E-16 117.4 17.2 159 243-410 26-187 (471)
143 PF07690 MFS_1: Major Facilita 99.4 2.1E-12 4.5E-17 117.5 11.6 155 246-409 15-173 (352)
144 PRK11652 emrD multidrug resist 99.4 2E-11 4.3E-16 112.9 18.2 180 223-412 5-187 (394)
145 PRK12307 putative sialic acid 99.4 1.1E-11 2.4E-16 115.9 16.5 144 243-395 34-180 (426)
146 TIGR00903 2A0129 major facilit 99.4 1.3E-11 2.9E-16 112.1 16.4 159 244-412 8-169 (368)
147 KOG1330 Sugar transporter/spin 99.4 4.8E-13 1E-17 118.2 6.7 182 229-419 35-220 (493)
148 PRK09874 drug efflux system pr 99.4 2.9E-11 6.3E-16 112.4 18.9 157 245-411 32-196 (408)
149 TIGR00881 2A0104 phosphoglycer 99.4 2.1E-12 4.5E-17 118.8 10.9 159 243-410 11-173 (379)
150 PRK05122 major facilitator sup 99.4 2.5E-11 5.5E-16 112.4 17.6 152 248-400 36-191 (399)
151 PRK11102 bicyclomycin/multidru 99.4 1.7E-11 3.7E-16 112.7 15.3 155 248-411 12-169 (377)
152 TIGR00892 2A0113 monocarboxyla 99.4 1.9E-11 4.1E-16 114.9 15.8 154 244-407 36-193 (455)
153 TIGR00924 yjdL_sub1_fam amino 99.4 1.7E-11 3.7E-16 115.4 15.4 148 247-403 30-187 (475)
154 PRK03893 putative sialic acid 99.4 2.4E-11 5.3E-16 116.0 16.4 145 242-395 35-182 (496)
155 TIGR00886 2A0108 nitrite extru 99.4 8.9E-11 1.9E-15 107.5 19.3 158 243-410 17-190 (366)
156 TIGR00890 2A0111 Oxalate/Forma 99.4 7.5E-12 1.6E-16 115.0 12.3 157 243-409 19-178 (377)
157 PRK10207 dipeptide/tripeptide 99.4 5.4E-11 1.2E-15 112.1 18.1 160 232-399 20-185 (489)
158 PRK12382 putative transporter; 99.3 5E-11 1.1E-15 110.2 17.3 144 252-396 41-187 (392)
159 KOG3762 Predicted transporter 99.3 5.8E-12 1.2E-16 113.2 10.3 152 244-404 388-543 (618)
160 TIGR01272 gluP glucose/galacto 99.3 3.7E-11 8.1E-16 106.5 15.4 160 219-394 136-301 (310)
161 TIGR00897 2A0118 polyol permea 99.3 3.7E-11 8.1E-16 111.2 16.0 157 248-409 34-194 (402)
162 PRK11043 putative transporter; 99.3 7E-11 1.5E-15 109.6 17.5 150 250-408 29-181 (401)
163 PRK09584 tppB putative tripept 99.3 6.9E-11 1.5E-15 112.0 17.2 151 243-401 38-194 (500)
164 PRK11195 lysophospholipid tran 99.3 9.7E-11 2.1E-15 107.9 17.6 171 223-411 3-176 (393)
165 PRK09556 uhpT sugar phosphate 99.3 2.9E-11 6.2E-16 114.3 14.3 160 246-409 48-213 (467)
166 COG3104 PTR2 Dipeptide/tripept 99.3 8.6E-10 1.9E-14 99.3 22.2 349 53-408 23-487 (498)
167 PF05977 MFS_3: Transmembrane 99.3 6.8E-11 1.5E-15 111.3 16.1 184 219-407 6-189 (524)
168 TIGR00880 2_A_01_02 Multidrug 99.3 5.1E-11 1.1E-15 92.7 11.5 135 267-410 6-140 (141)
169 PRK15034 nitrate/nitrite trans 99.3 4.9E-10 1.1E-14 103.0 19.3 164 242-410 49-234 (462)
170 PRK10406 alpha-ketoglutarate t 99.3 2.1E-10 4.5E-15 107.3 16.5 157 243-400 38-211 (432)
171 TIGR00894 2A0114euk Na(+)-depe 99.3 7E-11 1.5E-15 111.8 13.2 147 257-410 71-221 (465)
172 PRK09705 cynX putative cyanate 99.3 2.8E-10 6E-15 105.1 16.8 147 244-400 26-176 (393)
173 PRK10642 proline/glycine betai 99.2 2.1E-10 4.4E-15 109.1 15.9 144 266-411 64-215 (490)
174 PF03209 PUCC: PUCC protein; 99.2 1.6E-09 3.5E-14 95.6 20.0 312 77-404 6-394 (403)
175 cd06174 MFS The Major Facilita 99.2 2.4E-10 5.2E-15 103.8 15.6 153 243-404 15-170 (352)
176 TIGR00885 fucP L-fucose:H+ sym 99.2 4.8E-10 1E-14 103.7 17.6 155 244-404 20-203 (410)
177 PRK10077 xylE D-xylose transpo 99.2 4.6E-10 9.9E-15 106.8 17.6 147 263-411 59-217 (479)
178 TIGR00879 SP MFS transporter, 99.2 1.5E-10 3.2E-15 110.0 13.9 142 263-411 75-219 (481)
179 TIGR00899 2A0120 sugar efflux 99.2 4.7E-10 1E-14 103.1 16.6 156 247-411 18-179 (375)
180 PRK15075 citrate-proton sympor 99.2 2.7E-10 5.9E-15 106.6 14.2 162 232-394 20-198 (434)
181 TIGR00887 2A0109 phosphate:H+ 99.2 1.2E-09 2.7E-14 104.2 18.5 145 263-411 60-227 (502)
182 PF05631 DUF791: Protein of un 99.2 2.7E-10 5.9E-15 98.8 12.3 94 70-166 53-146 (354)
183 COG2223 NarK Nitrate/nitrite t 99.2 8.9E-10 1.9E-14 97.0 15.5 161 242-410 29-195 (417)
184 PRK09528 lacY galactoside perm 99.2 9E-10 1.9E-14 102.8 16.1 181 219-409 6-192 (420)
185 PRK06814 acylglycerophosphoeth 99.2 9.4E-10 2E-14 115.6 18.1 186 217-411 5-197 (1140)
186 KOG3764 Vesicular amine transp 99.2 7.4E-11 1.6E-15 102.4 7.7 141 263-412 110-251 (464)
187 PRK09952 shikimate transporter 99.2 9.6E-10 2.1E-14 102.9 15.9 129 270-399 75-211 (438)
188 KOG2615 Permease of the major 99.2 2.7E-10 5.9E-15 98.4 10.9 110 263-382 72-181 (451)
189 TIGR00805 oat sodium-independe 99.2 5.5E-10 1.2E-14 108.4 14.4 182 227-410 33-282 (633)
190 PRK03633 putative MFS family t 99.2 1.3E-09 2.7E-14 100.4 15.8 134 242-384 21-157 (381)
191 PF06609 TRI12: Fungal trichot 99.2 2.8E-10 6E-15 107.0 11.4 150 248-407 65-216 (599)
192 TIGR00901 2A0125 AmpG-related 99.1 1.9E-09 4E-14 98.3 16.6 160 245-411 6-181 (356)
193 PRK10133 L-fucose transporter; 99.1 3E-09 6.6E-14 99.3 18.1 134 242-381 41-177 (438)
194 PRK15011 sugar efflux transpor 99.1 4.9E-09 1.1E-13 96.8 19.0 157 246-412 35-198 (393)
195 TIGR01301 GPH_sucrose GPH fami 99.1 4.1E-09 8.9E-14 97.7 17.7 179 232-412 10-222 (477)
196 PRK11010 ampG muropeptide tran 99.1 5.7E-09 1.2E-13 98.9 18.9 162 243-411 28-197 (491)
197 PF03137 OATP: Organic Anion T 99.1 8.6E-12 1.9E-16 117.7 -0.2 115 53-169 5-169 (539)
198 TIGR00806 rfc RFC reduced fola 99.1 6.1E-09 1.3E-13 94.4 17.5 137 243-390 42-182 (511)
199 PTZ00207 hypothetical protein; 99.1 3.8E-09 8.2E-14 100.1 16.8 163 243-410 43-207 (591)
200 PRK08633 2-acyl-glycerophospho 99.1 3.4E-09 7.4E-14 111.8 17.7 156 219-383 5-165 (1146)
201 TIGR00882 2A0105 oligosacchari 99.1 2.7E-09 5.9E-14 98.7 15.1 162 245-410 21-185 (396)
202 PRK11902 ampG muropeptide tran 99.1 7.3E-09 1.6E-13 96.0 17.5 163 242-411 14-184 (402)
203 TIGR00896 CynX cyanate transpo 99.1 5.1E-09 1.1E-13 95.4 15.4 145 244-399 17-166 (355)
204 TIGR00883 2A0106 metabolite-pr 99.0 6.6E-09 1.4E-13 96.0 15.4 130 271-401 47-184 (394)
205 TIGR00898 2A0119 cation transp 99.0 6.7E-09 1.5E-13 99.4 14.9 149 250-411 112-266 (505)
206 KOG2532 Permease of the major 99.0 2.2E-08 4.8E-13 92.8 15.8 140 263-409 77-217 (466)
207 TIGR00902 2A0127 phenyl propri 99.0 5.3E-08 1.1E-12 89.6 18.0 145 243-397 20-168 (382)
208 TIGR00792 gph sugar (Glycoside 99.0 1.6E-08 3.4E-13 95.0 14.6 162 248-412 21-198 (437)
209 KOG2504 Monocarboxylate transp 98.9 9E-09 1.9E-13 96.6 12.2 175 226-409 45-222 (509)
210 KOG2816 Predicted transporter 98.9 4.8E-08 1E-12 90.2 16.6 309 52-383 23-392 (463)
211 KOG3626 Organic anion transpor 98.9 3.9E-08 8.4E-13 93.6 16.2 116 51-168 97-264 (735)
212 PRK11128 putative 3-phenylprop 98.9 5.2E-08 1.1E-12 89.7 16.2 149 243-401 20-172 (382)
213 KOG0255 Synaptic vesicle trans 98.9 3.1E-08 6.7E-13 95.2 14.3 136 263-411 122-257 (521)
214 COG3104 PTR2 Dipeptide/tripept 98.9 1.4E-08 3E-13 91.7 11.0 165 237-408 35-206 (498)
215 KOG0254 Predicted transporter 98.8 8.7E-08 1.9E-12 91.6 15.5 139 262-411 92-232 (513)
216 TIGR02718 sider_RhtX_FptX side 98.8 4E-07 8.6E-12 84.1 18.5 169 237-410 11-186 (390)
217 KOG0569 Permease of the major 98.8 2.3E-07 4.9E-12 85.4 16.0 142 263-411 64-207 (485)
218 PF06813 Nodulin-like: Nodulin 98.8 1.6E-07 3.4E-12 79.1 13.4 163 240-408 15-181 (250)
219 PF03092 BT1: BT1 family; Int 98.8 4.5E-08 9.7E-13 90.9 10.8 305 72-385 11-382 (433)
220 PF06779 DUF1228: Protein of u 98.8 1.7E-08 3.7E-13 68.3 5.8 81 63-145 4-84 (85)
221 COG0738 FucP Fucose permease [ 98.7 6.5E-07 1.4E-11 78.8 15.9 155 245-405 31-207 (422)
222 KOG3098 Uncharacterized conser 98.7 3E-06 6.4E-11 77.5 19.7 75 94-169 56-130 (461)
223 KOG2533 Permease of the major 98.7 1.9E-07 4.1E-12 87.0 12.0 141 263-412 85-231 (495)
224 KOG4332 Predicted sugar transp 98.7 2.1E-08 4.6E-13 82.5 4.4 325 70-404 56-427 (454)
225 PF13347 MFS_2: MFS/sugar tran 98.6 2.4E-07 5.3E-12 86.6 11.1 162 248-410 23-200 (428)
226 PRK09669 putative symporter Ya 98.6 1E-06 2.2E-11 82.8 14.8 161 248-411 31-207 (444)
227 PRK10429 melibiose:sodium symp 98.6 1.2E-06 2.7E-11 82.9 15.3 160 249-411 29-204 (473)
228 KOG2816 Predicted transporter 98.6 1.9E-06 4.1E-11 79.8 15.5 136 268-415 71-206 (463)
229 TIGR00788 fbt folate/biopterin 98.5 2.5E-06 5.3E-11 80.5 13.9 154 249-412 48-212 (468)
230 PF01306 LacY_symp: LacY proto 98.4 2.1E-07 4.6E-12 83.9 5.0 174 221-407 5-187 (412)
231 PF01770 Folate_carrier: Reduc 98.4 3.9E-05 8.5E-10 69.1 19.2 105 53-159 7-112 (412)
232 COG2807 CynX Cyanate permease 98.4 1.2E-05 2.7E-10 69.9 15.3 168 228-406 13-184 (395)
233 PRK11462 putative transporter; 98.4 1.1E-05 2.4E-10 76.0 16.4 159 250-411 33-207 (460)
234 TIGR00926 2A1704 Peptide:H+ sy 98.4 1.6E-05 3.4E-10 77.2 17.6 159 247-406 8-180 (654)
235 TIGR00880 2_A_01_02 Multidrug 98.4 1.8E-07 3.8E-12 72.5 2.6 75 94-168 4-78 (141)
236 PF05631 DUF791: Protein of un 98.3 4.6E-05 1E-09 66.8 16.2 155 250-414 57-222 (354)
237 TIGR00889 2A0110 nucleoside tr 98.3 1.8E-05 4E-10 73.6 14.9 150 245-411 21-182 (418)
238 PF00083 Sugar_tr: Sugar (and 98.3 6.4E-09 1.4E-13 98.1 -8.6 142 263-411 50-194 (451)
239 KOG2325 Predicted transporter/ 98.3 1.1E-05 2.4E-10 74.0 12.3 184 223-411 31-232 (488)
240 PF12832 MFS_1_like: MFS_1 lik 98.3 1.3E-06 2.8E-11 58.9 4.5 67 60-128 9-75 (77)
241 PF06963 FPN1: Ferroportin1 (F 98.2 0.0011 2.4E-08 60.9 24.0 125 251-376 282-411 (432)
242 PRK09848 glucuronide transport 98.2 9.6E-05 2.1E-09 69.7 17.6 119 248-368 30-157 (448)
243 KOG0252 Inorganic phosphate tr 98.2 5.2E-06 1.1E-10 74.3 8.2 114 263-379 88-202 (538)
244 PF03209 PUCC: PUCC protein; 98.2 5.1E-05 1.1E-09 67.7 13.9 135 255-390 8-158 (403)
245 PF03092 BT1: BT1 family; Int 98.1 9.8E-05 2.1E-09 68.8 14.6 155 250-410 13-177 (433)
246 KOG3574 Acetyl-CoA transporter 98.0 0.00056 1.2E-08 60.1 16.7 81 51-136 31-117 (510)
247 KOG2563 Permease of the major 98.0 0.00015 3.3E-09 65.1 13.7 158 223-384 41-203 (480)
248 KOG0253 Synaptic vesicle trans 98.0 0.00019 4.1E-09 62.8 13.7 137 263-411 117-253 (528)
249 TIGR01272 gluP glucose/galacto 98.0 2E-05 4.4E-10 70.0 7.7 94 71-167 160-256 (310)
250 COG2211 MelB Na+/melibiose sym 98.0 0.00036 7.8E-09 64.2 14.8 166 244-412 29-211 (467)
251 PF03825 Nuc_H_symport: Nucleo 97.9 0.00023 5E-09 65.5 13.1 124 242-376 17-144 (400)
252 COG0477 ProP Permeases of the 97.9 3.3E-05 7.2E-10 68.6 6.8 104 65-168 16-121 (338)
253 PF11700 ATG22: Vacuole efflux 97.7 0.004 8.6E-08 58.7 18.6 143 264-413 75-252 (477)
254 PF05978 UNC-93: Ion channel r 97.6 0.004 8.7E-08 48.5 13.8 108 263-380 41-148 (156)
255 KOG0637 Sucrose transporter an 97.6 0.00017 3.8E-09 64.8 6.5 70 73-144 54-128 (498)
256 COG2270 Permeases of the major 97.6 8.8E-05 1.9E-09 66.2 4.5 113 53-168 256-368 (438)
257 PF06813 Nodulin-like: Nodulin 97.5 0.00043 9.3E-09 58.6 8.2 87 68-157 19-112 (250)
258 TIGR00769 AAA ADP/ATP carrier 97.2 0.049 1.1E-06 51.0 18.0 106 276-382 61-190 (472)
259 PF12832 MFS_1_like: MFS_1 lik 97.2 0.002 4.4E-08 43.4 6.6 56 242-297 15-73 (77)
260 KOG4686 Predicted sugar transp 97.1 0.0013 2.8E-08 55.5 5.7 114 49-168 265-383 (459)
261 PF06963 FPN1: Ferroportin1 (F 97.0 0.062 1.3E-06 49.7 16.6 142 263-404 42-196 (432)
262 PF02487 CLN3: CLN3 protein; 97.0 0.015 3.2E-07 52.8 12.1 71 92-162 63-133 (402)
263 COG0477 ProP Permeases of the 96.8 0.049 1.1E-06 48.0 14.5 129 262-397 42-174 (338)
264 PF01770 Folate_carrier: Reduc 96.8 0.072 1.6E-06 48.6 15.0 157 243-410 20-183 (412)
265 PF03137 OATP: Organic Anion T 96.8 0.0003 6.5E-09 67.1 -0.0 172 236-407 12-249 (539)
266 KOG3626 Organic anion transpor 96.8 0.024 5.1E-07 55.2 12.5 178 231-408 101-343 (735)
267 PF00854 PTR2: POT family; In 96.8 0.0084 1.8E-07 55.0 9.4 116 290-406 2-121 (372)
268 PF05978 UNC-93: Ion channel r 96.7 0.0091 2E-07 46.5 7.5 74 94-168 43-116 (156)
269 PRK03612 spermidine synthase; 96.6 0.054 1.2E-06 51.8 13.7 51 354-404 142-193 (521)
270 KOG1237 H+/oligopeptide sympor 96.2 0.89 1.9E-05 44.0 19.2 98 68-167 55-178 (571)
271 KOG3810 Micronutrient transpor 96.2 0.13 2.9E-06 45.2 12.0 298 95-407 49-420 (433)
272 TIGR00926 2A1704 Peptide:H+ sy 96.0 0.27 5.9E-06 48.4 14.8 94 73-168 10-112 (654)
273 KOG1479 Nucleoside transporter 95.7 1 2.3E-05 40.9 16.1 102 65-169 32-145 (406)
274 KOG3097 Predicted membrane pro 95.3 1.6 3.5E-05 38.4 15.0 70 98-168 68-137 (390)
275 PF06779 DUF1228: Protein of u 95.2 0.22 4.8E-06 34.0 7.7 65 247-311 12-79 (85)
276 PF07672 MFS_Mycoplasma: Mycop 94.6 1.6 3.4E-05 37.1 12.9 27 211-237 82-108 (267)
277 KOG3098 Uncharacterized conser 94.4 0.5 1.1E-05 44.0 10.5 106 263-378 54-159 (461)
278 KOG0637 Sucrose transporter an 93.8 0.096 2.1E-06 47.8 4.5 149 228-378 34-200 (498)
279 KOG1237 H+/oligopeptide sympor 93.7 2.8 6E-05 40.8 14.5 158 248-405 59-242 (571)
280 PF02487 CLN3: CLN3 protein; 93.5 1.2 2.7E-05 40.7 11.2 131 264-409 64-196 (402)
281 KOG4332 Predicted sugar transp 93.4 0.26 5.6E-06 41.8 6.2 154 252-415 62-227 (454)
282 TIGR00939 2a57 Equilibrative N 93.4 7.1 0.00015 36.7 18.0 112 263-376 311-427 (437)
283 TIGR00769 AAA ADP/ATP carrier 93.2 7.7 0.00017 36.7 26.4 66 73-138 25-94 (472)
284 PF03219 TLC: TLC ATP/ADP tran 92.7 4.2 9E-05 38.7 13.7 109 273-382 73-205 (491)
285 PF13000 Acatn: Acetyl-coenzym 92.2 10 0.00023 35.7 15.9 43 341-383 425-467 (544)
286 KOG1479 Nucleoside transporter 91.3 9.1 0.0002 35.1 13.6 27 232-258 23-49 (406)
287 KOG3762 Predicted transporter 91.3 0.06 1.3E-06 50.2 0.0 89 78-168 398-486 (618)
288 KOG3574 Acetyl-CoA transporter 87.4 21 0.00045 32.6 12.5 78 228-308 33-118 (510)
289 TIGR00939 2a57 Equilibrative N 86.4 20 0.00043 33.8 12.8 29 269-297 55-83 (437)
290 KOG2881 Predicted membrane pro 85.8 14 0.00029 31.3 9.9 28 110-137 91-118 (294)
291 COG3202 ATP/ADP translocase [E 84.8 36 0.00078 32.2 17.0 112 271-382 74-209 (509)
292 COG4262 Predicted spermidine s 83.8 33 0.0007 30.9 12.1 23 359-381 141-163 (508)
293 KOG2601 Iron transporter [Inor 83.7 20 0.00044 32.5 10.6 41 360-400 178-218 (503)
294 PF13000 Acatn: Acetyl-coenzym 81.1 19 0.0004 34.1 9.9 44 264-307 45-89 (544)
295 COG5336 Uncharacterized protei 74.4 12 0.00026 26.6 5.2 35 91-125 45-80 (116)
296 COG5336 Uncharacterized protei 73.8 13 0.00029 26.5 5.3 36 352-387 37-72 (116)
297 PF01733 Nucleoside_tran: Nucl 72.8 1 2.2E-05 40.0 -0.3 112 263-376 186-303 (309)
298 PRK03612 spermidine synthase; 71.7 33 0.00072 33.2 9.5 30 85-114 47-76 (521)
299 PF06027 DUF914: Eukaryotic pr 67.0 65 0.0014 29.0 9.6 25 264-288 172-196 (334)
300 PF02990 EMP70: Endomembrane p 64.5 53 0.0012 31.8 9.3 72 216-288 251-326 (521)
301 COG4769 Predicted membrane pro 61.0 12 0.00026 29.1 3.3 52 96-153 81-132 (181)
302 PRK10263 DNA translocase FtsK; 54.9 1.1E+02 0.0025 33.0 10.0 19 269-287 62-80 (1355)
303 PF11947 DUF3464: Protein of u 52.9 40 0.00087 26.2 5.0 28 345-372 118-145 (153)
304 PF12670 DUF3792: Protein of u 51.6 95 0.0021 22.8 12.3 48 252-299 27-74 (116)
305 KOG2887 Membrane protein invol 49.5 1.3E+02 0.0028 23.8 10.0 48 108-155 99-148 (175)
306 PF09605 Trep_Strep: Hypotheti 47.7 1.5E+02 0.0033 24.0 12.9 54 97-153 37-90 (186)
307 COG1268 BioY Uncharacterized c 45.2 74 0.0016 25.7 5.7 23 95-117 89-111 (184)
308 PF10785 NADH-u_ox-rdase: NADH 44.4 92 0.002 21.5 5.3 41 101-141 31-78 (86)
309 PF02632 BioY: BioY family; I 40.5 1.1E+02 0.0023 23.8 5.8 25 95-119 60-84 (148)
310 PF02694 UPF0060: Uncharacteri 38.6 74 0.0016 22.9 4.1 47 91-137 57-103 (107)
311 PF07456 Hpre_diP_synt_I: Hept 37.8 85 0.0018 24.3 4.8 50 95-150 68-117 (148)
312 PF07672 MFS_Mycoplasma: Mycop 37.7 1.8E+02 0.0038 25.2 7.0 65 91-155 144-218 (267)
313 KOG3097 Predicted membrane pro 36.2 3.3E+02 0.0072 24.7 9.6 35 267-301 66-100 (390)
314 PF05545 FixQ: Cbb3-type cytoc 35.5 53 0.0012 19.6 2.8 18 402-420 25-42 (49)
315 KOG3880 Predicted small molecu 34.9 40 0.00086 29.9 2.9 133 264-410 67-201 (409)
316 PRK02237 hypothetical protein; 34.2 1.3E+02 0.0027 21.8 4.7 48 91-138 59-106 (109)
317 COG2274 SunT ABC-type bacterio 33.9 5.3E+02 0.011 26.3 11.6 21 266-286 164-184 (709)
318 PRK02237 hypothetical protein; 33.2 91 0.002 22.5 3.9 45 261-305 58-102 (109)
319 COG0861 TerC Membrane protein 33.0 3.2E+02 0.007 23.5 8.8 45 341-385 36-80 (254)
320 PF10183 ESSS: ESSS subunit of 32.6 61 0.0013 23.3 3.2 37 379-415 52-88 (105)
321 PF02694 UPF0060: Uncharacteri 32.3 74 0.0016 22.9 3.4 44 262-305 57-100 (107)
322 KOG2601 Iron transporter [Inor 31.6 1.4E+02 0.003 27.6 5.6 29 345-373 410-438 (503)
323 PF01733 Nucleoside_tran: Nucl 31.6 12 0.00027 33.2 -0.7 76 93-168 187-275 (309)
324 PF03547 Mem_trans: Membrane t 31.4 3.3E+02 0.0072 25.0 8.7 14 273-286 9-22 (385)
325 PRK12996 ulaA PTS system ascor 31.2 4.6E+02 0.01 24.8 12.9 18 67-84 61-78 (463)
326 PF09527 ATPase_gene1: Putativ 30.1 1.4E+02 0.0029 18.3 5.2 35 96-130 8-43 (55)
327 PF03219 TLC: TLC ATP/ADP tran 29.8 5.2E+02 0.011 25.0 20.9 80 214-297 271-357 (491)
328 COG2119 Predicted membrane pro 27.4 1.9E+02 0.0041 23.4 5.2 37 267-303 142-178 (190)
329 KOG4830 Predicted sugar transp 27.0 21 0.00046 30.5 0.0 62 58-121 24-94 (412)
330 PRK11111 hypothetical protein; 26.5 3.8E+02 0.0083 22.4 9.3 68 336-404 24-92 (214)
331 PF01914 MarC: MarC family int 25.4 3.9E+02 0.0084 22.1 10.5 64 339-403 21-85 (203)
332 PF04226 Transgly_assoc: Trans 24.9 1.6E+02 0.0035 17.5 5.0 14 372-385 6-19 (48)
333 PF11166 DUF2951: Protein of u 24.7 1.4E+02 0.003 20.9 3.5 19 119-137 73-91 (98)
334 COG4262 Predicted spermidine s 23.2 1.9E+02 0.0041 26.4 5.0 89 74-163 30-127 (508)
335 KOG3810 Micronutrient transpor 23.1 2.2E+02 0.0047 26.1 5.3 94 280-383 63-156 (433)
336 TIGR00210 gltS sodium--glutama 22.8 78 0.0017 29.4 2.8 22 267-288 246-267 (398)
337 PTZ00370 STEVOR; Provisional 22.8 1.5E+02 0.0033 25.7 4.2 15 402-416 272-286 (296)
338 KOG4473 Uncharacterized membra 22.2 2.8E+02 0.0061 23.0 5.3 40 351-390 158-197 (247)
339 PRK10692 hypothetical protein; 22.1 2.1E+02 0.0045 19.7 3.9 43 117-159 3-56 (92)
340 PF04341 DUF485: Protein of un 20.5 3.1E+02 0.0067 19.1 5.0 15 242-256 31-45 (91)
341 PF07099 DUF1361: Protein of u 20.1 4.5E+02 0.0098 20.9 6.3 22 91-112 64-85 (168)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-36 Score=272.02 Aligned_cols=379 Identities=35% Similarity=0.565 Sum_probs=310.9
Q ss_pred chhHHHHHHHHHHhhhhhccccccccchhhhhh--------hccCC--CCc--hhHHHHHHHHHHHHHHHHHHhHHhhhc
Q 014286 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESIS--------LDLGF--NGN--TLAEGLVVSMCLGGAFIGSTLSGWIAD 113 (427)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--------~~~~~--~~~--~~~~g~~~s~~~l~~~~~~~~~G~l~d 113 (427)
.++.......++++.+-.+|..+.+++..+.+. +.++. +++ +..++.+.+++.+|.++|+.+.|.++|
T Consensus 6 t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~ 85 (485)
T KOG0569|consen 6 TRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLAD 85 (485)
T ss_pred cHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455666677777888999999988765543 34453 322 233688899999999999999999999
Q ss_pred ccchhHHHHHhhHHHHHHHHHHHh---hhhhHHHHHHHHHHhhhccccccceeeccc-----------------------
Q 014286 114 GVGRRRAFQLCALPMIIGASISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVT----------------------- 167 (427)
Q Consensus 114 r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~----------------------- 167 (427)
|+|||..+.++.++..++.++..+ .+++++++++|++.|+..|......+.|+.
T Consensus 86 ~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ 165 (485)
T KOG0569|consen 86 RFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGI 165 (485)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHH
Confidence 999999999999988888877766 578999999999999999977777766665
Q ss_pred ----------------------------------------CCchhhhh-cCChHHHHHHHHHHhCCCchhhHHHHHh---
Q 014286 168 ----------------------------------------ESPHWLYK-KGRTAEAEAEFEKLLGGSHVKSSLAELS--- 203 (427)
Q Consensus 168 ----------------------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 203 (427)
|||||+.. +++.++|.+.+..+.+..+...+.++..
T Consensus 166 ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~ 245 (485)
T KOG0569|consen 166 LLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREI 245 (485)
T ss_pred HHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 99999998 8999999999999999876554443322
Q ss_pred hhhcCCCCCcchhHhhhcccchh-HHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhH
Q 014286 204 KLDRGDDGDIVKFEELLYGRHFR-VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVA 279 (427)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~ 279 (427)
+.++.+++++.+++++++++..| ...+...+....++.+.+.+.+|...++++.|++.. ......++...+.++++
T Consensus 246 ~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~ 325 (485)
T KOG0569|consen 246 EEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVS 325 (485)
T ss_pred HHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223334677899999987554 466777788888999999999999999999999877 67778888999999999
Q ss_pred hhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCC-CchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhH
Q 014286 280 MVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPG-SASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKA 358 (427)
Q Consensus 280 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 358 (427)
.++.||.|||++++.+..++.+..+++.......... ++..+..+.+.+++...++.+.+|+.+.+.+|++|++.|+.+
T Consensus 326 ~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa 405 (485)
T KOG0569|consen 326 PFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAA 405 (485)
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHH
Confidence 9999999999999999999888887776654432212 233345577888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHhhCC
Q 014286 359 MAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEIALLP 425 (427)
Q Consensus 359 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
.++.....++..++....+..+.+..|. ..|+.+.+.+++..+..++++||||+|+.+|+.++.++
T Consensus 406 ~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~ 471 (485)
T KOG0569|consen 406 QSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEK 471 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHh
Confidence 9999999999999999999999999998 68888999999999999999999999999888766543
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1e-33 Score=272.23 Aligned_cols=357 Identities=19% Similarity=0.206 Sum_probs=257.2
Q ss_pred CchhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHh
Q 014286 45 SWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLC 124 (427)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~ 124 (427)
..+..|.++++++++.+..+++...+++++|.+.++++++..+. +++.+++.++.+++++++|+++||+|||++++++
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~--g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~ 238 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGK--GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLIC 238 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 34566777888888889999999999999999999999876555 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeec---------------------------------------
Q 014286 125 ALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALY--------------------------------------- 165 (427)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~--------------------------------------- 165 (427)
++++++++++++++++++.++++|+++|++.|+..+....+
T Consensus 239 lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 239 LSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999877332222222
Q ss_pred -----------------------------------ccCCchhhhhcCChHHHHHHHHHHhCCCchh----hH---HHHHh
Q 014286 166 -----------------------------------VTESPHWLYKKGRTAEAEAEFEKLLGGSHVK----SS---LAELS 203 (427)
Q Consensus 166 -----------------------------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~ 203 (427)
++|+|+|+..+++.+++...+..+...+... .. ..+.+
T Consensus 319 G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 319 GWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred cchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 2388888888888888888887776543210 00 00000
Q ss_pred h--hhc------CCCCC----------------cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhc--
Q 014286 204 K--LDR------GDDGD----------------IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA-- 257 (427)
Q Consensus 204 ~--~~~------~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 257 (427)
. ..+ .+... ...++++++.+.++..++...++++..+ .+..+..|.|.++++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~-~yygl~~w~P~~~~~~~~ 477 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSF-GYYGLSVWFPDMIKHLQA 477 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 0 000 00000 0135566766666666766666665555 4555566666553221
Q ss_pred ----------------------------------------CC--------------------------------------
Q 014286 258 ----------------------------------------GL-------------------------------------- 259 (427)
Q Consensus 258 ----------------------------------------g~-------------------------------------- 259 (427)
|+
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 557 (742)
T TIGR01299 478 DDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFE 557 (742)
T ss_pred HHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhcc
Confidence 00
Q ss_pred --------------------------------C------hhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHH
Q 014286 260 --------------------------------S------SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 301 (427)
Q Consensus 260 --------------------------------~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 301 (427)
+ ......+.+++.+++.+++|+++||+|||+++..+.++.++
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai 637 (742)
T TIGR01299 558 NTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCI 637 (742)
T ss_pred ccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 0 01224456688889999999999999999999999888888
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 302 SMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL 381 (427)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 381 (427)
+.+++.+.... ...++..++++++.. +..+...++++|++|++.|++++|+.+....+|++++|.+.+.+.
T Consensus 638 ~~ll~~~~~s~--------~~ll~~~~l~g~~~~-~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~ 708 (742)
T TIGR01299 638 SCFFLSFGNSE--------SAMIALLCLFGGLSI-AAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFV 708 (742)
T ss_pred HHHHHHHHccH--------HHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87776654321 122222233333333 344566679999999999999999999999999999999999887
Q ss_pred HHhccchhHHHHHHHHHHHHHHHHHhccCCCCCC
Q 014286 382 EQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 415 (427)
Q Consensus 382 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (427)
+. +...+|++.+++.++++++.+ ++||++++.
T Consensus 709 ~~-~~~~pf~i~a~~lll~~ll~~-~LPET~~~~ 740 (742)
T TIGR01299 709 GI-TKAAPILFASAALACGGLLAL-KLPDTRGQV 740 (742)
T ss_pred Hh-hhHHHHHHHHHHHHHHHHHHH-hCCCCcccc
Confidence 74 456677777777777666554 568888764
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3.2e-32 Score=258.11 Aligned_cols=369 Identities=30% Similarity=0.466 Sum_probs=248.5
Q ss_pred hhHHHHHHHHHHhhhhhccccccccchhhhhhhcc--------CCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchh
Q 014286 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL--------GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR 118 (427)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr 118 (427)
+.....++++.++.+.++++...+++..|.+++++ +.+ ..+.+++.+++.++..++++++|+++||+|||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr 85 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAA--NSLLGFCVASALIGCIIGGALGGYCSNRFGRR 85 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 34455677788899999999999999999999988 444 34459999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHhh------------hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH
Q 014286 119 RAFQLCALPMIIGASISATT------------RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF 186 (427)
Q Consensus 119 ~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 186 (427)
++++.+.++++++.++++++ ++++.++++|+++|++.|...+...+++.|. ..++++..+....
T Consensus 86 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~----~~~~~rg~~~~~~ 161 (479)
T PRK10077 86 DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEI----APAHIRGKLVSFN 161 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhh----CChhhhhHHHHHH
Confidence 99999999999999888863 2356789999999999999999999888862 1111111110000
Q ss_pred ------H---------------------------------------H--HhCCCchhhHHHHHhhhh---------cCCC
Q 014286 187 ------E---------------------------------------K--LLGGSHVKSSLAELSKLD---------RGDD 210 (427)
Q Consensus 187 ------~---------------------------------------~--~~~~~~~~~~~~~~~~~~---------~~~~ 210 (427)
. . .....+.+.......+.+ ...+
T Consensus 162 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 241 (479)
T PRK10077 162 QFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNT 241 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh
Confidence 0 0 000000000000000000 0000
Q ss_pred CCc---chhHhhhcc-----cch-----hHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHH
Q 014286 211 GDI---VKFEELLYG-----RHF-----RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLL 274 (427)
Q Consensus 211 ~~~---~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~ 274 (427)
+.+ ...++..++ +.. ...........+......+...++.|.+.+..|.+.. ......++..++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 242 LATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHH
Confidence 000 011111110 000 0011111122222333344556777888888887644 455567788889
Q ss_pred HHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccc
Q 014286 275 GSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRI 354 (427)
Q Consensus 275 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 354 (427)
+.++.++++||+|||+.+..+..+.+++.+.+...... +.........+.+++.+++....|..+.++.|.+|+++
T Consensus 322 ~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~ 397 (479)
T PRK10077 322 FTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT----QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI 397 (479)
T ss_pred HHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc----CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH
Confidence 99999999999999999999998888887766544321 11112233344455555555556777779999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH------HHhccchhHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHhhCC
Q 014286 355 RAKAMAVCMSVHWVINFFVGLLFLRLL------EQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEIALLP 425 (427)
Q Consensus 355 ~g~~~g~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
|+++.|+.+...+++.++++.+.+.+. +..++...|.+.+++++++.++.+.+.+|+|+++.+|.+++.++
T Consensus 398 r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 398 RGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhh
Confidence 999999999999999999877776544 56788888888888888887777778899999998887766543
No 4
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.5e-31 Score=253.58 Aligned_cols=379 Identities=33% Similarity=0.587 Sum_probs=297.7
Q ss_pred hhHHHHHHHHHHhhhhhccc--cccccchhhhhhhccCCCC---ch--hHHHHHHHHHHHHHHHHHHhHHhhhcccchhH
Q 014286 47 KLSFPHVLVATLSSFLFGYH--LGVVNEPLESISLDLGFNG---NT--LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR 119 (427)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~---~~--~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~ 119 (427)
+..........++.+..+++ .+...+..+.+.++...+. ++ .+.+|+.+++.++..++++++|+++|++|||+
T Consensus 41 ~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~ 120 (513)
T KOG0254|consen 41 PFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKK 120 (513)
T ss_pred eehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33444566677777888886 6677777777777543221 12 23489999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeeccc--------------------------------
Q 014286 120 AFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT-------------------------------- 167 (427)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~-------------------------------- 167 (427)
.++++.+++.++++++++++|+++++++|+++|+|.|+.....+.|+.
T Consensus 121 ~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254|consen 121 TLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999976666665555
Q ss_pred ------------------------------CCchhhhhcCChHHHHHHHHHHhCC--CchhhHHHHHhhhh--cC-CCCC
Q 014286 168 ------------------------------ESPHWLYKKGRTAEAEAEFEKLLGG--SHVKSSLAELSKLD--RG-DDGD 212 (427)
Q Consensus 168 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~-~~~~ 212 (427)
|+|+|+..+++..++...+..+.+. .....+..+.+... +. ....
T Consensus 201 ~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (513)
T KOG0254|consen 201 TSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG 280 (513)
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc
Confidence 7888999989999999988888883 33333333322111 11 1111
Q ss_pred cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh--HHHHHHHHHHHHHHHhHhhhhcccCccc
Q 014286 213 IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG--LANVFVGIANLLGSVVAMVLMDKLGRKA 290 (427)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 290 (427)
+..++++++....++..++..+..++++.+.+...+|.+.+++..|.+.. ......++..+++..++..+.||+|||+
T Consensus 281 ~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ 360 (513)
T KOG0254|consen 281 KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRK 360 (513)
T ss_pred cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 22466666655677788888999999999999999999999999888854 5667777888888899999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhcCCC----CCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHH
Q 014286 291 LLQWSFFSMAVSMAIQVAASSSYIP----GSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVH 366 (427)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 366 (427)
.++.+...+.++.++++........ .....+..+....++...+..+..++.+.+.+|.+|.+.|+.+.++.....
T Consensus 361 lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n 440 (513)
T KOG0254|consen 361 LLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVN 440 (513)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHH
Confidence 9999999999999888876554322 234456777788888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH-HHHHhccCCCCCCHHHHHHhhCC
Q 014286 367 WVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA-FVKRNVVETKGKSLQEIEIALLP 425 (427)
Q Consensus 367 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
++...+.......+.+..+....|..++.++.+... ..+++.||+|+++.+|+++..++
T Consensus 441 ~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 441 WLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 998887777776666665544566677777766666 67788999999999998875543
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=5.8e-32 Score=256.55 Aligned_cols=370 Identities=19% Similarity=0.265 Sum_probs=237.8
Q ss_pred CCchhHHHHHHHHHHhhhhhccccccccchhhhhhhcc-C--CCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHH
Q 014286 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL-G--FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA 120 (427)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~--~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~ 120 (427)
+..+..+..+.+++++.+.++++...++.+.|.+.+++ + ...+..+.+++.+.+.++..++++++|+++||+|||++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~ 88 (502)
T TIGR00887 9 PFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRV 88 (502)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 33456666788889999999999999999999887753 1 11233445899999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhhhh------hHHHHHHHHHHhhhccccccceeecccC--------------------------
Q 014286 121 FQLCALPMIIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTE-------------------------- 168 (427)
Q Consensus 121 l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~-------------------------- 168 (427)
+.++++++.+++++++++++ ++.++++|+++|++.|...+....++.|
T Consensus 89 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~ 168 (502)
T TIGR00887 89 YGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168 (502)
T ss_pred HHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876 7899999999999998666666665553
Q ss_pred ----------------------------------------------------------CchhhhhcCChH-HHHHHHHHH
Q 014286 169 ----------------------------------------------------------SPHWLYKKGRTA-EAEAEFEKL 189 (427)
Q Consensus 169 ----------------------------------------------------------~~~~~~~~~~~~-~~~~~~~~~ 189 (427)
||||+..+++.+ ++...+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~ 248 (502)
T TIGR00887 169 IVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAV 248 (502)
T ss_pred HHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHH
Confidence 222222222211 111111111
Q ss_pred hCCCchhhHHHHHhhhhcCCCCCcchhHhhhccc---chhHHHHHHH-HHHhhhccchhHHHHhHHHHHHhcCCChhH--
Q 014286 190 LGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR---HFRVVFIGST-LFALQQLSGINAIFYFSSSVFKSAGLSSGL-- 263 (427)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-- 263 (427)
...... .+.++.++.+++++..+.+++++++++ +.++..+... ..+.... .+.....+.|.+++..|.+...
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~~~p~i~~~~G~~~~~~~ 326 (502)
T TIGR00887 249 LQVKIE-AEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDI-AFYGVNLNQKVILSAIGYSPPAAT 326 (502)
T ss_pred hccccc-cCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HHHccccccHHHHHHHcCCCCccc
Confidence 100000 000000000000001113466666532 1112222211 2222111 2223344566776777765320
Q ss_pred -------------HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 014286 264 -------------ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMF 330 (427)
Q Consensus 264 -------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (427)
......++.+++.++.++++||+|||+.+..+..+.+++..++....... ... .......+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~---~~~--~~~~~~~~~ 401 (502)
T TIGR00887 327 NNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL---STH--GFLAIYVLA 401 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc---chh--HHHHHHHHH
Confidence 12333456667888999999999999998888877777666555433110 001 111112222
Q ss_pred HHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------hccchhHHHHHHHHHHH
Q 014286 331 VLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ----------LGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~----------~g~~~~~~~~~~~~~~~ 400 (427)
...++.+..+..+.+..|.+|++.|+++.|+.+.+++++++++|.+.+.+.+. .++...|.+++++++++
T Consensus 402 ~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 481 (502)
T TIGR00887 402 QFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLG 481 (502)
T ss_pred HHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHH
Confidence 22334556677777889999999999999999999999999999999999884 34455778888877776
Q ss_pred HHHHHHhccCCCCCCHHHHHH
Q 014286 401 VAFVKRNVVETKGKSLQEIEI 421 (427)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~ 421 (427)
.+.. ++.||++++++||+++
T Consensus 482 ~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 482 ILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred HHHh-eEeccCCCCCHHhhhC
Confidence 5544 5779999998877654
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=7.5e-31 Score=249.16 Aligned_cols=371 Identities=30% Similarity=0.546 Sum_probs=251.2
Q ss_pred hhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCC------CchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHH
Q 014286 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFN------GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA 120 (427)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~ 120 (427)
++.+...+++.++.+...++...+.+.+|.+.++++.+ .++.+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 44444566677777888899999999999999998887 445666999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhhh---hhHHHHHHHHHHhhhccccccceeecccCCch--h---------------------hh
Q 014286 121 FQLCALPMIIGASISATTR---NLIGMLLGRFVVGTGMGLGPTVAALYVTESPH--W---------------------LY 174 (427)
Q Consensus 121 l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~--~---------------------~~ 174 (427)
++.+.+++.++++++.+.. +++.++++|+++|++.+...+....++.|... . ..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999996643 45689999999999999888887777775210 0 00
Q ss_pred -------hcCChHHHHHH------HH--HHhCCCchhh------HHHH----HhhhhcCCCCC-----------------
Q 014286 175 -------KKGRTAEAEAE------FE--KLLGGSHVKS------SLAE----LSKLDRGDDGD----------------- 212 (427)
Q Consensus 175 -------~~~~~~~~~~~------~~--~~~~~~~~~~------~~~~----~~~~~~~~~~~----------------- 212 (427)
....+...... .. ......+.+. +.++ ..+....++..
T Consensus 184 ~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (481)
T TIGR00879 184 SGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIE 263 (481)
T ss_pred HHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence 00001100000 00 0000000000 0000 00000000000
Q ss_pred ----cchhHhhhcccc--hhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhh
Q 014286 213 ----IVKFEELLYGRH--FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLM 283 (427)
Q Consensus 213 ----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~ 283 (427)
+..+++.++..+ .+..+....+..+..........++.+.+.++.|.+.. .......++.+++.++.++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 343 (481)
T TIGR00879 264 KRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLV 343 (481)
T ss_pred HhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001122222211 23334444444444444455666778888888888774 566677788889999999999
Q ss_pred cccCccchhhhhhHHHHHHHHHHHHHhhcCCCCC--chhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHH
Q 014286 284 DKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGS--ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAV 361 (427)
Q Consensus 284 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 361 (427)
||++||+.+..+..+.+++.+++........... ...+..+....++..+++.+..+....++.|.+|++.|+++.|+
T Consensus 344 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 423 (481)
T TIGR00879 344 DRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISI 423 (481)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHH
Confidence 9999999998887777777666653222111110 11233334444555566666667777788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCCCCCCHH
Q 014286 362 CMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQ 417 (427)
Q Consensus 362 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (427)
.+...+++++++|.+.+.+.++.|+...|++.+++++++.++.+++.+|+++++.+
T Consensus 424 ~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 424 AVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence 99999999999999999999999999999999988888888877777887766543
No 7
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.5e-31 Score=229.77 Aligned_cols=341 Identities=19% Similarity=0.189 Sum_probs=252.7
Q ss_pred HHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
.+..++.+.++.|..+....+...++|++++|+|+|.++. |++.|.|.+++.++.++...+.||+.||++++..+.++
T Consensus 11 ~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~a--G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 11 MWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAA--GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 3445778888888888999999999999999999987777 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------HhCCCc--------
Q 014286 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------LLGGSH-------- 194 (427)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-------- 194 (427)
.++++++++++||+.++++|++.|+..|..++....+..+ +..+++..++...+.. ..+.+.
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~----lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~ 164 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAAR----LVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF 164 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999999999999999999999999999999998888876 5556666655544322 111110
Q ss_pred ----------------hhhHHHHHhhhhcCCC---CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHH
Q 014286 195 ----------------VKSSLAELSKLDRGDD---GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK 255 (427)
Q Consensus 195 ----------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
........+ ..+.++ .+..+..+.+|++..+..++...+.+..++ ..+.|..|.+.+
T Consensus 165 GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F---~~ftYi~P~L~~ 240 (394)
T COG2814 165 GWRATFLAIAVLALLALLLLWKLLP-PSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHF---ALYTYIRPFLES 240 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchh---hhHHhHHHHHHH
Confidence 000011112 011111 122236677888888777776666665444 344466677777
Q ss_pred hcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 014286 256 SAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVL 332 (427)
Q Consensus 256 ~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (427)
..|++.. +....++++.++|+.++|++.|| +.|+.+.....+.++....+.+.... .+.......++++
T Consensus 241 v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~-------~~~~~~~~~~wg~ 312 (394)
T COG2814 241 VAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGAS-------PALALALLFLWGF 312 (394)
T ss_pred ccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcch-------HHHHHHHHHHHHH
Confidence 8888776 78888999999999999999999 88888888877777777766654432 1333333333332
Q ss_pred HHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 333 TFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
...... .......++.. ++.+..+.+++....|+|..+|..++|.+.|+.|+....++.+++.+++.++.....+
T Consensus 313 a~~~~~-~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 313 AFSPAL-QGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred Hhhhhh-hHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222211 12222344433 4789999999999999999999999999999999999998888888887776654433
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=1.9e-30 Score=247.42 Aligned_cols=332 Identities=21% Similarity=0.298 Sum_probs=226.2
Q ss_pred chhhhhhhccCCC-CchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHH
Q 014286 72 EPLESISLDLGFN-GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (427)
Q Consensus 72 ~~~~~i~~~~~~~-~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (427)
+..|.+.+|+|++ ++..+.+++.+++.++..++++++|+++||+|||++++++.++.+++++++++++|++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5678999999986 224445999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhccccccceeeccc----------------------------------------------------------CCchh
Q 014286 151 VGTGMGLGPTVAALYVT----------------------------------------------------------ESPHW 172 (427)
Q Consensus 151 ~G~~~g~~~~~~~~~i~----------------------------------------------------------~~~~~ 172 (427)
.|++.+...+....++. |+|+|
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~ 269 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRW 269 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 99999987777777666 34444
Q ss_pred hhhcCChHHHHHHHHHHhCCCchh--hHHHHHh-hhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHh
Q 014286 173 LYKKGRTAEAEAEFEKLLGGSHVK--SSLAELS-KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYF 249 (427)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
+..+++.+++...+......+... .+..+.. +++..+++++.+++++++++..+...+......+.. ....+.
T Consensus 270 l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~ 345 (505)
T TIGR00898 270 LISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTT----AFSYYG 345 (505)
T ss_pred HHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHH----HHHHHH
Confidence 444444443333332221111000 0000000 000011112346778888877766555443333221 111222
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHH
Q 014286 250 SSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLM 329 (427)
Q Consensus 250 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (427)
.+......+.+........++..+++.++.+++.||+|||+.+..+.++.+++.+++...... ..+.......+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~ 419 (505)
T TIGR00898 346 LVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVD------LYFLRTALAVL 419 (505)
T ss_pred HhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCC------chHHHHHHHHH
Confidence 333334455565566667788888999999999999999999998888877777666554321 11222222222
Q ss_pred HHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 330 FVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
..++.. ...+..+.+..|.+|++.|+++.|+.+....+|++++|.+.+ + +..++..++.+++++.+++.++. .+.|
T Consensus 420 ~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~-~~lp 495 (505)
T TIGR00898 420 GKFGIT-SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILT-LFLP 495 (505)
T ss_pred HHHHHH-HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHH-HcCc
Confidence 222222 233555668999999999999999999999999999999998 3 44566677888887777766555 4678
Q ss_pred CCCCCCHH
Q 014286 410 ETKGKSLQ 417 (427)
Q Consensus 410 ~~~~~~~~ 417 (427)
|+++++++
T Consensus 496 et~~~~l~ 503 (505)
T TIGR00898 496 ETKGVPLP 503 (505)
T ss_pred CCCCCCCC
Confidence 88887654
No 9
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=2.1e-29 Score=231.71 Aligned_cols=344 Identities=11% Similarity=0.076 Sum_probs=225.9
Q ss_pred HHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHH
Q 014286 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (427)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 129 (427)
|.....++++.+..... ...++.+|.+++|+|+|.++. |++.+.+.+++.+++++.|+++||+|||+++..++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVA--ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 33344555554444333 667899999999999876666 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHH----------HH-----hCC--
Q 014286 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFE----------KL-----LGG-- 192 (427)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----------~~-----~~~-- 192 (427)
++++++++++|++.++++|+++|++.+...+....++.+ |+ + ++...+..... .. ...
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~---~~-~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~ 160 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKR---RF-Q-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE 160 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHH---Hc-c-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999888877776654 22 1 12221111100 00 000
Q ss_pred Cchh--------------hHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcC
Q 014286 193 SHVK--------------SSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAG 258 (427)
Q Consensus 193 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 258 (427)
.+.. ......++.++++++++...++.++++..+...+...+... .+.....+.|.+.++.|
T Consensus 161 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~----~~~~~~~~lp~~l~~~g 236 (393)
T PRK09705 161 TWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLING----GYASLIAWLPAFYIEIG 236 (393)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcCCcccccCHhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcC
Confidence 0000 00000011111111111223344444444433332222222 33344455565566678
Q ss_pred CChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHh
Q 014286 259 LSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFA 335 (427)
Q Consensus 259 ~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (427)
.+.. ....+.+++.++++++.+++.||++||+.+..+..+..++...+..... .. ... ...+.+.+.+
T Consensus 237 ~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~------~~-~~~--~~~l~g~g~g 307 (393)
T PRK09705 237 ASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL------QL-PVL--WAMVCGLGLG 307 (393)
T ss_pred CChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc------hH-HHH--HHHHHHHhcc
Confidence 7765 5667788899999999999999999999888877766666554432211 11 111 1222333333
Q ss_pred hcccchhhhhccCcC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHhccCCCC
Q 014286 336 LGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVKRNVVETKG 413 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (427)
.. .+.......+.. |+++++++.|+.+...++++.++|.+.|++.|..| +...|.+.++++++..+....+.+|+++
T Consensus 308 ~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 308 GA-FPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred ch-HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 22 233333445555 46789999999999999999999999999999987 6777777777777776666777777766
Q ss_pred CC
Q 014286 414 KS 415 (427)
Q Consensus 414 ~~ 415 (427)
+.
T Consensus 387 ~~ 388 (393)
T PRK09705 387 QL 388 (393)
T ss_pred ch
Confidence 54
No 10
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=1.3e-29 Score=238.48 Aligned_cols=346 Identities=13% Similarity=0.102 Sum_probs=219.9
Q ss_pred hhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhH
Q 014286 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (427)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 126 (427)
|..+.++...+++++..++++..+++..|.+.+|+|++.++. |++.+.+.+++.+++++.|+++||+|||+++..+++
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTEL--GMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 335667778888888889999999999999999999876665 999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHh-----hhhhHHHHHHHHHHhhhccccccceeecccCC-c-----h---------------------hhh
Q 014286 127 PMIIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTES-P-----H---------------------WLY 174 (427)
Q Consensus 127 ~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~-~-----~---------------------~~~ 174 (427)
++++++++.++ ++|++.++++|+++|++.+...+....++.+- | + |..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 88887776665 68999999999999999998887777666531 0 0 000
Q ss_pred hc---CChHHHHHH---HH-------HHhCCCchhhH-----HHH-Hhhh---hcC-CCCCcch----h-Hhhhcccchh
Q 014286 175 KK---GRTAEAEAE---FE-------KLLGGSHVKSS-----LAE-LSKL---DRG-DDGDIVK----F-EELLYGRHFR 226 (427)
Q Consensus 175 ~~---~~~~~~~~~---~~-------~~~~~~~~~~~-----~~~-~~~~---~~~-~~~~~~~----~-~~~~~~~~~~ 226 (427)
.. +.+...... +. ...... .+++ .++ ..+. +++ +++++.+ + +..++++..+
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 261 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSD-SPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIW 261 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCC-ChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHH
Confidence 00 001100000 00 000000 0000 000 0000 000 0001111 1 1245565555
Q ss_pred HHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHH
Q 014286 227 VVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVS 302 (427)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 302 (427)
...+..++... .......|.|.++ +..|.+.. .......++.+++.++.|+++||++||+.+.....+..++
T Consensus 262 ~~~~~~~~~~~----~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 262 LLCFANIFLYI----VRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 44443333222 2233445566444 56788765 4555677788999999999999999988766554443333
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHH-HHHHHHHHHHHHH
Q 014286 303 MAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV-INFFVGLLFLRLL 381 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~ 381 (427)
..++.... ..+.+...+..++.+... .+..........|.+|++.+|++.|+.+..+++ |.+++|.+.|.+.
T Consensus 338 ~~~~~~~~------~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~ 410 (467)
T PRK09556 338 FTLGVYQH------ATSEYMYLASLFALGFLV-FGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIA 410 (467)
T ss_pred HHHHHHHh------cCcHHHHHHHHHHHHHHH-hhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHh
Confidence 22222211 111122222222222211 121222223667999999999999999999997 7799999999999
Q ss_pred H------------HhccchhHHHHHHHHHHHHHHHHH
Q 014286 382 E------------QLGPQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 382 ~------------~~g~~~~~~~~~~~~~~~~~~~~~ 406 (427)
| ..||+..|.+.+++.+++.+....
T Consensus 411 ~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 411 DPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred cccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 9 578999998887777776655543
No 11
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=9.3e-36 Score=279.98 Aligned_cols=367 Identities=34% Similarity=0.584 Sum_probs=276.3
Q ss_pred HHHhhhhhccccccccchhhhhh--hccCCCC-------chhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhH
Q 014286 56 ATLSSFLFGYHLGVVNEPLESIS--LDLGFNG-------NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (427)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~-------~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 126 (427)
+.++.+.++++...++...+... .++..+. ++.+.+++.+...+|..+|+++.|.++||+|||++++++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 44556788888888777666554 2222222 12345899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh---hhHHHHHHHHHHhhhccccccceeeccc------------------------------------
Q 014286 127 PMIIGASISATTR---NLIGMLLGRFVVGTGMGLGPTVAALYVT------------------------------------ 167 (427)
Q Consensus 127 ~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~------------------------------------ 167 (427)
+..+++++.++++ |++.+.++|+++|++.|+..+....++.
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999977777776665
Q ss_pred ----------------------------CCchhhhhcCChHHHHHHHHHHhCCCchhhHHHHHhhhhcCCCCCcchhHhh
Q 014286 168 ----------------------------ESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEEL 219 (427)
Q Consensus 168 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (427)
|||+|+..+++.+++.+.+....+....+++..+..+..++.++.+..++++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDL 244 (451)
T ss_pred cccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeec
Confidence 8899998888888888877775544333333322222222222223567777
Q ss_pred hcccc-hhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh-HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhH
Q 014286 220 LYGRH-FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 297 (427)
Q Consensus 220 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 297 (427)
++++. ++.......+..+....+.+...+|.+.+.+..+.+.. .......+...++.+++.++.||+|||+.+..+..
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~ 324 (451)
T PF00083_consen 245 FRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLL 324 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 77754 44555555666666666667777888888888888777 55566667777888888899999999999999888
Q ss_pred HHHHHHHHHHHHhhcCCCCC-chhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014286 298 SMAVSMAIQVAASSSYIPGS-ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 376 (427)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 376 (427)
+.+++.+.+..........+ ......+....++...+..+..+..+.+..|.+|++.|+++.|+....+++++++++.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~ 404 (451)
T PF00083_consen 325 LMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFL 404 (451)
T ss_pred cccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88877776651111111010 11223334444455566667788888899999999999999999999999999999999
Q ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHh
Q 014286 377 FLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEIA 422 (427)
Q Consensus 377 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (427)
...+.+..+....+.+.++++++..++.+++.||+|+++++|++++
T Consensus 405 ~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 405 FPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred cccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 9988888775667888888888888888899999999999999875
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=8.1e-29 Score=234.22 Aligned_cols=349 Identities=18% Similarity=0.207 Sum_probs=216.2
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhH--HHH--HHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLA--EGL--VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~g~--~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
.+....++.+++++|..+++...|.+.++++.+.++.. .+. +.++.++++.++++++|+++||+|||+++.+++++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 56677889999999999999999999999976544421 122 25778899999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHH--------HHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH----------HH--
Q 014286 128 MIIGASISATTRNLIG--------MLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE----------FE-- 187 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------~~-- 187 (427)
++++++++++++|+++ ++++|+++|++.|+.++....++.|. ..++++...... +.
T Consensus 97 ~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~----~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 97 MSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEY----SPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHh----CCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999875 89999999999999999988888872 111111100000 00
Q ss_pred ------HHh------CCC--------------------chhhHHH---HHhhhhc--C---CCCCcchhHhhhcccchhH
Q 014286 188 ------KLL------GGS--------------------HVKSSLA---ELSKLDR--G---DDGDIVKFEELLYGRHFRV 227 (427)
Q Consensus 188 ------~~~------~~~--------------------~~~~~~~---~~~~~~~--~---~~~~~~~~~~~~~~~~~~~ 227 (427)
... ... ..++... ...+.++ . ++.++.++++++++ +++.
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 251 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATK-HWRS 251 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHH-hHHH
Confidence 000 000 0000000 0000000 0 01122345666653 2233
Q ss_pred HHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHH
Q 014286 228 VFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 303 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 303 (427)
.........+... .+.....|.|.++ +..|.+.. .......++.+++.++.|+++||+|||+.+..+.++..+..
T Consensus 252 ~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~ 330 (490)
T PRK10642 252 LLTCIGLVIATNV-TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLA 330 (490)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3322222222222 2333444556555 45677654 34455567778889999999999999998877765443332
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 304 AIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 383 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 383 (427)
..+..... ...........++.+.+.+.... ....+..|.+|++.|+++.|+.+....+++.++|.+.+++.+.
T Consensus 331 ~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~ 404 (490)
T PRK10642 331 IPAFILIN-----SNVIGLIFAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES 404 (490)
T ss_pred HHHHHHHh-----CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111111 01112222233333333332222 3334777899999999999987777888889999999999887
Q ss_pred hc-cchhHHHHHHHHHHHHHHHHHhccCCCC
Q 014286 384 LG-PQLLYSIFGTFCLMAVAFVKRNVVETKG 413 (427)
Q Consensus 384 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (427)
.+ +..++....+.++++.+.. ++.||+++
T Consensus 405 ~~~~~~~~~~~~~~~~i~~~~~-~~~pes~~ 434 (490)
T PRK10642 405 TQNLMMPAYYLMVVAVIGLITG-VTMKETAN 434 (490)
T ss_pred hCCchHHHHHHHHHHHHHHHHH-HHhccccC
Confidence 65 4555555555555544444 34576644
No 13
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.3e-28 Score=229.82 Aligned_cols=327 Identities=18% Similarity=0.204 Sum_probs=218.4
Q ss_pred hHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
.++..++.+.++.+.++++.....+.+|.+.+++|+++.+. +++.+++.+++.++++++|+++||+|||+++..+.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEG--AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 33445677788888899999999999999999999876665 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH----------HHHH-----hCC
Q 014286 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE----------FEKL-----LGG 192 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~-----~~~ 192 (427)
.++++++++++++++.++++|+++|++.+...+....++.|... +++...+... +... ...
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~ 168 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWP----KHLKSKASAFLVSGFGIGNIIAAYFMPSFAEA 168 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCC----HhHhhHhhhHHHHHHhHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999888877777765210 0000000000 0000 000
Q ss_pred -C--------------------chhhHHHHHhhh-hcCCCC-------CcchhHhhhcccchhHHHHHHHHHHhhhccch
Q 014286 193 -S--------------------HVKSSLAELSKL-DRGDDG-------DIVKFEELLYGRHFRVVFIGSTLFALQQLSGI 243 (427)
Q Consensus 193 -~--------------------~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
. ..++..+..+++ ++++++ ....++++++++.++............ +...
T Consensus 169 ~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 247 (426)
T PRK12307 169 YGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSI-FGAN 247 (426)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHH-HHHH
Confidence 0 000000000000 000000 011456677777665544333322221 2122
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.....+.|.+.++.|.+.. .......++.+++.++.|++.||++||+.+..+.++..+....+..... ..
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~------~~- 320 (426)
T PRK12307 248 WPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQ------DN- 320 (426)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcc------cc-
Confidence 2234456666666787765 4556667888899999999999999999888777666555443332211 11
Q ss_pred HHHHHHHHHHHHHH-hhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 014286 321 YLSVGGMLMFVLTF-ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLL 389 (427)
Q Consensus 321 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 389 (427)
. ......+++.++ ..+..+....++.|.+|++.||++.|+.+...++++.++|.+.|.+.+..|+...
T Consensus 321 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 321 Y-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred H-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 1 111222222222 1223344445788999999999999999999999999999999999999886543
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=8.5e-29 Score=228.05 Aligned_cols=337 Identities=18% Similarity=0.154 Sum_probs=217.6
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
+..+.++.+..........+.+|.+.+|+|.+.++. |++.+.+.+++.++++++|+++||+|||+++..+.+++++++
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 88 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQV--GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASH 88 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Confidence 334344444433444455667899999999876666 999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------HhCC----------Cch-
Q 014286 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------LLGG----------SHV- 195 (427)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~----------~~~- 195 (427)
+++++++|++.++++|+++|++.+...+....++.+. ..++++..+...... ..+. .+.
T Consensus 89 ~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~----~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 164 (390)
T PRK03545 89 VLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRV----APAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRT 164 (390)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHH
Confidence 9999999999999999999999988877777776651 112222222111110 0000 000
Q ss_pred -----------h--hHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh
Q 014286 196 -----------K--SSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG 262 (427)
Q Consensus 196 -----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 262 (427)
. ......++.+++++....+.++.++++..+......++..... .....+..+++.+..|.+..
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~s~~ 241 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLPSEHSGSLKSLPLLFRRPALVSLYLLTVVVVTAH---FTAYSYIEPFVQQVAGLSEN 241 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHhCcHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCcc
Confidence 0 0000011111111112234566777776655444333322222 22222334444455676655
Q ss_pred ---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhccc
Q 014286 263 ---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG 339 (427)
Q Consensus 263 ---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (427)
......+++.++++++.+++.||++||... .+..+..++...+.... .+.+.......+.+.+.. ...
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~l~g~~~~-~~~ 312 (390)
T PRK03545 242 FATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA-------NSEWHLSVLSIFWGIAIM-CIG 312 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh-------chHHHHHHHHHHHHHHHh-cch
Confidence 455667788899999999999999987644 34433333333222211 112233333444444332 333
Q ss_pred chhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhc
Q 014286 340 PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNV 408 (427)
Q Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 408 (427)
+.....+.|..| +.++++.|+.+...++|..+||.+.|.+.|+.|++..+...+++.+++.+......
T Consensus 313 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 313 LAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 444456777766 68899999999999999999999999999999999999998888888777765544
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.97 E-value=5.2e-29 Score=231.05 Aligned_cols=344 Identities=18% Similarity=0.184 Sum_probs=223.6
Q ss_pred hhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhH
Q 014286 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (427)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 126 (427)
++.|.++.+.++..+.++++....++..|.+.+++|.+.++. |++.+.+.++..++++++|+++||+|||+++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQM--GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 355667888888889999999999999999999999866555 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH--------------HhCC
Q 014286 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK--------------LLGG 192 (427)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------------~~~~ 192 (427)
+.+++.+++++++|++.+++.|+++|++.+...+....++.|. ..+++...+...... ....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEA----VGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999999999998888777777652 111111111100000 0000
Q ss_pred C-----------------------chhhHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHh
Q 014286 193 S-----------------------HVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYF 249 (427)
Q Consensus 193 ~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
. ..++..+. .+.++.++.++...+..++++..+......... +...........+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 242 (406)
T PRK11551 165 DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAF-AQAAGAGKQRAPVLRALFGEGRATATLLLWISY-FFTLIVLYFLLNW 242 (406)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhH-HhccCcchhhhhhHHHHhhhhhhhHHHHHHHHH-HHHHHHHHHHHHH
Confidence 0 00000000 000000111111122333332222221111111 1111123344456
Q ss_pred HHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 014286 250 SSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 326 (427)
Q Consensus 250 ~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
.|.+.++.|.+.. .......++.+++.++.|++.||++||+.+..+.....++...+.... ..+.....
T Consensus 243 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 314 (406)
T PRK11551 243 LPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--------SFAGMLLA 314 (406)
T ss_pred HHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--------cHHHHHHH
Confidence 6777777787655 566667788899999999999999999888776655555544433221 11222222
Q ss_pred HHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHH
Q 014286 327 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 405 (427)
..+.+.+.. +..+...++..|.+|+++|+++.|+.+...++|..++|.+.|.+.++.+ +...+.....+.+++.+..+
T Consensus 315 ~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 315 GFAAGLFVV-GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHH-hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 222333222 3345556688999999999999999999999999999999999998755 34444444444444444444
Q ss_pred Hh
Q 014286 406 RN 407 (427)
Q Consensus 406 ~~ 407 (427)
..
T Consensus 394 ~~ 395 (406)
T PRK11551 394 LL 395 (406)
T ss_pred HH
Confidence 33
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=3.6e-28 Score=226.49 Aligned_cols=345 Identities=17% Similarity=0.144 Sum_probs=202.9
Q ss_pred HHHHHHHHHHhhhhhccccccccchhhhhhhccCCC-CchhHHHH---HHHHHHHHHHHHHHhHHhhhcccchhHHHHHh
Q 014286 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFN-GNTLAEGL---VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLC 124 (427)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~g~---~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~ 124 (427)
++..+...+++.+++++|...++...|.+.++++.+ .+..+.+. +.+...++..++++++|+++||+|||+++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 334566777889999999999999999999998632 12222233 34445555569999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhH--------HHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHH----------HH
Q 014286 125 ALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEA----------EF 186 (427)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~ 186 (427)
+++++++++++++++++. .++++|+++|++.|+.++....++.|. ..++++..... ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~----~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEV----AVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHh----CCCCcccHHHHHHHHHHHHHHHH
Confidence 999999999999998874 589999999999999999999998873 11111111100 00
Q ss_pred HHH-----h---------CCCc----------------hhhHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHH
Q 014286 187 EKL-----L---------GGSH----------------VKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFA 236 (427)
Q Consensus 187 ~~~-----~---------~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
... . ...+ .....++.++.++++.++..+++++++++..+...+...+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 253 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTA-- 253 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhhhcccccHHHHHhhHHHHHHHHHHHH--
Confidence 000 0 0000 0000000000000011112346677765544433222221
Q ss_pred hhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhc
Q 014286 237 LQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS 312 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (427)
..... +.....|.|.++ +..|.+.. .......+...++.++.|+++||++||+.+.....+.++....+......
T Consensus 254 ~~~~~-~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 332 (432)
T PRK10406 254 AGSLC-FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQN 332 (432)
T ss_pred HHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11222 222334455444 55677764 34445556667778888999999999988766655443332222111110
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHhc-cchhH
Q 014286 313 YIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV-INFFVGLLFLRLLEQLG-PQLLY 390 (427)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~~ 390 (427)
....+..+....+.....+ ...+....+.+|.+|++.|+++.|+.+..++. .+...|.+.+. .+..| +...+
T Consensus 333 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~ 406 (432)
T PRK10406 333 ----VSSPYAAFGLVMCALLIVS-FYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFF 406 (432)
T ss_pred ----CCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHH
Confidence 1111111111111111111 11234455889999999999999999988775 34457777774 45566 44455
Q ss_pred HHHHHHHHHHHHHHHH
Q 014286 391 SIFGTFCLMAVAFVKR 406 (427)
Q Consensus 391 ~~~~~~~~~~~~~~~~ 406 (427)
+..++..+++.+..++
T Consensus 407 ~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 407 WYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555555555554443
No 17
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=1.5e-28 Score=225.97 Aligned_cols=317 Identities=19% Similarity=0.182 Sum_probs=211.6
Q ss_pred cccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHH
Q 014286 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (427)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 146 (427)
....++.+|.+.+++|++.++. |++.+++.+++.++++++|+++||+|||+++..+.++.+++++++++++|++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAV--AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL 96 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456788999999999866655 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHH---------------hCCCchhh--------------
Q 014286 147 GRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKL---------------LGGSHVKS-------------- 197 (427)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~-------------- 197 (427)
+|+++|++.+...+.....+.+ |. ++ ++..+....... ......+.
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~---~~-~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVK---WF-PD-KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHH---Hc-Cc-ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999998766555544433 11 11 111111110000 00000000
Q ss_pred ----HHHHHhhhhc----CCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHH
Q 014286 198 ----SLAELSKLDR----GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANV 266 (427)
Q Consensus 198 ----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~ 266 (427)
..++.+++++ +.+.+....++.++++..+......+..... ......+.+.+.++.+.+.. ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVS----GLLLIGLYKPYGQSLGLSDGFLVLAVS 247 (377)
T ss_pred HHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHH----HHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 0000000000 0011122345667777666554443333221 12222233344566676654 4566
Q ss_pred HHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhc
Q 014286 267 FVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLL 346 (427)
Q Consensus 267 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (427)
...++.++++++.|++.||++||+.+..+..+..++.+.+..... ...+.......+.+.+.+. ..+....+.
T Consensus 248 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~g~-~~~~~~~~~ 320 (377)
T TIGR00890 248 ISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM------LNDVLFLATVALVFFTWGG-TISLFPSLV 320 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc------chhHHHHHHHHHHHHHhcc-chhccHHHH
Confidence 777888899999999999999999988888777777665544321 1111222222333333332 233444578
Q ss_pred cCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 014286 347 PEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 347 ~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 401 (427)
.|.+|+++|+++.|+.+....+|..++|.+.|.+.+..||+..|.+.+++.+++.
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 321 SDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999888777666543
No 18
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=2.6e-29 Score=218.35 Aligned_cols=372 Identities=19% Similarity=0.259 Sum_probs=247.8
Q ss_pred chhHHHHHHHHHHhhhhhccccccccchhhhhhhcc-CCC-----CchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhH
Q 014286 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL-GFN-----GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR 119 (427)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~-----~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~ 119 (427)
.++.+..+.++..+.+.+.||...++.+.|.+...+ |-+ ......+.+..+..+|..+||+++|+++||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 455677888999999999999999999999887655 222 22333488899999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhhh-------hhHHHHHHHHHHhhhccccccceeecccCCchh--------------------
Q 014286 120 AFQLCALPMIIGASISATTR-------NLIGMLLGRFVVGTGMGLGPTVAALYVTESPHW-------------------- 172 (427)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------------------- 172 (427)
++...++++.+++++++++. =.+++...|++.|+|.|+-+|...++.+|...-
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999999888753 246789999999999999999999988864210
Q ss_pred ---------------hhhcCChHHHHHHHHHHhCCCchh-----------hHHH---------------HHhhhhcC---
Q 014286 173 ---------------LYKKGRTAEAEAEFEKLLGGSHVK-----------SSLA---------------ELSKLDRG--- 208 (427)
Q Consensus 173 ---------------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---------------~~~~~~~~--- 208 (427)
+..++...+...++....+...++ .+.+ +.++....
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~ 275 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIE 275 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccc
Confidence 000001111111111111100000 0000 00000000
Q ss_pred --------CCCCcch---hHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---H---------HH
Q 014286 209 --------DDGDIVK---FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---L---------AN 265 (427)
Q Consensus 209 --------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~---------~~ 265 (427)
...++.. +...+..++-+.++.....++..-. .++....+...+++..|..+. . ..
T Consensus 276 ~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDi-afy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 276 AESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDI-AFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred hhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHH
Confidence 0000011 2222222222333333333333222 333344455566666665544 1 12
Q ss_pred HHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhh
Q 014286 266 VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLL 345 (427)
Q Consensus 266 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (427)
.+...+.++|..+...++|++|||++.+.+++++.+..+.++...+.. .......+...+..++...+.+.....+
T Consensus 355 iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~----~~~~Gf~v~y~l~~ff~NFGPn~ttfiv 430 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQL----ENTIGFVVLYSLTFFFGNFGPNATTFIV 430 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccc----cccCceeehHHHHHHHHhcCCCceeEEe
Confidence 222233345667788899999999999999999999888877665421 1122233344444555566777777778
Q ss_pred ccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-----HhccchhHHHHHHHHHHHHHHHHHhccCCCCCCHHHHH
Q 014286 346 LPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-----QLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIE 420 (427)
Q Consensus 346 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (427)
.+|.+|++.|++..|+..+.+-.|++++...+.++.+ ..|.+.++++++++++++.+.. ++.||+++++++|++
T Consensus 431 paE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~~~leei~ 509 (538)
T KOG0252|consen 431 PAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKGKSLEEIS 509 (538)
T ss_pred ehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeecccccCHHHhc
Confidence 9999999999999999999999999999999999999 7889999999999998887766 456799999999886
Q ss_pred Hhh
Q 014286 421 IAL 423 (427)
Q Consensus 421 ~~~ 423 (427)
.+.
T Consensus 510 ~e~ 512 (538)
T KOG0252|consen 510 NEE 512 (538)
T ss_pred Chh
Confidence 543
No 19
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.96 E-value=4.4e-28 Score=225.96 Aligned_cols=351 Identities=13% Similarity=0.082 Sum_probs=216.8
Q ss_pred HHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHH
Q 014286 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (427)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 130 (427)
.+....+++.+...++...+++.+|.+.+++|++.++. |++.+.+.+++.+++++.|+++||+|||+++.++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDI--GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 34556667777777888888889999999999876555 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCc-h--------------------------hhhhcCChHHHH
Q 014286 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESP-H--------------------------WLYKKGRTAEAE 183 (427)
Q Consensus 131 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~--------------------------~~~~~~~~~~~~ 183 (427)
+++++++++|++.+++.|++.|++.|...+....++.+.- + ++.....+....
T Consensus 101 ~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f 180 (434)
T PRK11663 101 INILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGM 180 (434)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHH
Confidence 9999999999999999999999999988777776665410 0 000000111100
Q ss_pred HHHHH------HhCCCchhhHHHHH--h------hh----hcCCCCCcchhHh-----hhcccchhHHHHHHHHHHhhhc
Q 014286 184 AEFEK------LLGGSHVKSSLAEL--S------KL----DRGDDGDIVKFEE-----LLYGRHFRVVFIGSTLFALQQL 240 (427)
Q Consensus 184 ~~~~~------~~~~~~~~~~~~~~--~------~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
..... .......++..++. + ++ .+++++.+.+.++ .++++..+...+...+...
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 257 (434)
T PRK11663 181 MIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYV--- 257 (434)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHH---
Confidence 00000 00000000000000 0 00 0000001112222 3334444433332222222
Q ss_pred cchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhccc--Cccchh-hhhhHHHHHHHHHHHHHhhcC
Q 014286 241 SGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKL--GRKALL-QWSFFSMAVSMAIQVAASSSY 313 (427)
Q Consensus 241 ~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 313 (427)
.+.....+.|.++ +..|.+.. .......++..+++++.|+++||+ ++|+.. ........+....+.....
T Consensus 258 -~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-- 334 (434)
T PRK11663 258 -VRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF-- 334 (434)
T ss_pred -HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc--
Confidence 2334444555555 55677765 456667788899999999999998 333332 2222222222221111111
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Q 014286 314 IPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIF 393 (427)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 393 (427)
.. ........+..+. ...+..........|.+|++.|+++.|+.++..++|.+++|.+.|.+.|..||...|.+.
T Consensus 335 ---~~-~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~ 409 (434)
T PRK11663 335 ---AS-YVMQAACFFTIGF-FVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVI 409 (434)
T ss_pred ---cc-HHHHHHHHHHHHH-HHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHH
Confidence 11 1111111111111 111112223346789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCC
Q 014286 394 GTFCLMAVAFVKRNVVETKGK 414 (427)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~ 414 (427)
+++.+++++..+...++++++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 410 SIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHHHHHHHHHHhhhchh
Confidence 888888777665555544443
No 20
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=213.27 Aligned_cols=351 Identities=15% Similarity=0.132 Sum_probs=238.1
Q ss_pred chhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhh
Q 014286 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (427)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~ 125 (427)
++.++.+++...+++...++.+..++.+.|.+.+|.++|.+|. |++.+.+.++|.++..+.|.++||.+.|..+.+++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~l--G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQL--GILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 3445667888999999999999999999999999999876666 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccC------Cch----h-------------------hhhc
Q 014286 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE------SPH----W-------------------LYKK 176 (427)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~------~~~----~-------------------~~~~ 176 (427)
++.++.++++++++|++.+.++-+++|+..|..+|.+...+.. --+ | +..+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988887762 000 1 1111
Q ss_pred CChHHHHH----------HHHHHhCC--------CchhhHHHHHhhh-hcCCCCCcch-----hHhhhcccchhHHHHHH
Q 014286 177 GRTAEAEA----------EFEKLLGG--------SHVKSSLAELSKL-DRGDDGDIVK-----FEELLYGRHFRVVFIGS 232 (427)
Q Consensus 177 ~~~~~~~~----------~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 232 (427)
..+..+.- .+...... +.+++...+..+. +++++.+..+ .+-+++||..|.+.++.
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~ 261 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALAN 261 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 11111100 00000000 0111111111111 1111111122 34456777777766666
Q ss_pred HHHHhhhccchhHHHHhHH-HHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhccc--CccchhhhhhHH-HHHHHHH
Q 014286 233 TLFALQQLSGINAIFYFSS-SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKL--GRKALLQWSFFS-MAVSMAI 305 (427)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~~~-~~~~~~~ 305 (427)
......-++ +..|.| ++.+..|++.. .....+-.++++|++++||++||+ |||....+.+.+ ..++.+.
T Consensus 262 vfvYivR~g----i~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~ 337 (448)
T COG2271 262 VFVYVVRYG----INDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL 337 (448)
T ss_pred HHHHHHHHH----HhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 555553333 333443 33345666655 677777889999999999999996 566555443333 3333333
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Q 014286 306 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV-INFFVGLLFLRLLEQL 384 (427)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~ 384 (427)
+...+ ..+.++..+++.+.++ +..+..-+......|..|++..|++.|+...+.++ |.+.+....|++.|.+
T Consensus 338 ~w~~~------~~~~~l~~~~l~~iGf-~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 338 YWLAP------NGSYLLDAILLFIIGF-LIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHcCC------CccHHHHHHHHHHHHH-HHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 33222 1223333333333332 22233344555778999999999999999999999 8999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 385 GPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 385 g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
||...|.++.+.++++.++......
T Consensus 411 gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 411 GWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988888777766654443
No 21
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.1e-27 Score=221.60 Aligned_cols=334 Identities=18% Similarity=0.180 Sum_probs=213.2
Q ss_pred HHHHHHhhhhhccccccccchhhh-hhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
+..+++..++..++..+..|.+|. +.+++|.+..+. |++.+++.+++.+++++.|+++||+|||++++.+.++++++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 17 IVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLA--GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH--HHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 344556666666777778888986 678899876655 99999999999999999999999999999999999999888
Q ss_pred HHHHHhh--------hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH----------HH-----
Q 014286 132 ASISATT--------RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF----------EK----- 188 (427)
Q Consensus 132 ~~~~~~~--------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~----- 188 (427)
++.+.++ .+++.+++.|+++|++.+...+....++.|. ..+++..++.... ..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 170 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGR----VGALHTGRVISWNGIATYGALAIGAPLGVL 170 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhh----cChhhhccchhhhhhhhhHHHHHHHHHHHH
Confidence 7776653 2577899999999999998888776665542 1111111111100 00
Q ss_pred HhCCCchhh---------H--HHHHh--hhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHH
Q 014286 189 LLGGSHVKS---------S--LAELS--KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK 255 (427)
Q Consensus 189 ~~~~~~~~~---------~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+......+. . ..... ++.+.+++++.++++.+++ .+.......+... .+.....+.+.+..
T Consensus 171 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 244 (399)
T PRK05122 171 LYHWGGLAGLGLLIMLLALLGLLLARPRPAVPPVKGERLPFRRVLGR--VWPYGMGLALASI----GFGTIATFITLYYA 244 (399)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhHHHHHHH--HHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 000000000 0 00000 0001111112233333332 1111111111111 12223334444444
Q ss_pred hcCCChh-HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH
Q 014286 256 SAGLSSG-LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTF 334 (427)
Q Consensus 256 ~~g~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (427)
+.+.+.. .......++.+++.++.+++.||+++|+.+..+..+.+++...+....+ .+.......+.+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~G~~~ 316 (399)
T PRK05122 245 ARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS--------PWMALIGAALTGFGF 316 (399)
T ss_pred HcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc--------HHHHHHHHHHHHHhH
Confidence 5555332 4556677888899999999999999999888877777776655544321 123333344444444
Q ss_pred hhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHh
Q 014286 335 ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
+.. .+.......|..|+++||++.|+.+...++|..+++.+.|.+.+..|++..+.+.+++.+++.++....
T Consensus 317 ~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 317 SLV-FPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 432 334334667888999999999999999999999999999999999999999988888777776655443
No 22
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=3.8e-27 Score=216.27 Aligned_cols=330 Identities=16% Similarity=0.176 Sum_probs=221.7
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
+..+.++.++...+.+..++.+|.+.+++|.|.++. |++.+.+.++..++++++|+++||+|||+++..+.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQV--GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777788888999999999999999865555 999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH----------HHHhCCC---c----h
Q 014286 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF----------EKLLGGS---H----V 195 (427)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---~----~ 195 (427)
+++++++|++.++++|+++|++.+...+.....+.+.. ..++...+.... ....... . .
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 161 (381)
T PRK03633 86 AGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSG----TSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVL 161 (381)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchH
Confidence 99999999999999999999999887766544443211 001111111110 0000000 0 0
Q ss_pred hh-----------HHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh--
Q 014286 196 KS-----------SLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-- 262 (427)
Q Consensus 196 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-- 262 (427)
.. ......++++.++++..+.++.++++.++......+.... .......+.|.+.++.|.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~~~~~g~s~~~~ 237 (381)
T PRK03633 162 PWVTGLVLAAILPLLFTRILNQQAENHDSTSIWPMLKLRQARLGVNGCIISGI----VLGSLYGLMPLYLNHQGMSDASI 237 (381)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCCCCCHHHHHHhcchHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHH
Confidence 00 0000001111111122345667777766643332222221 122333456666666777755
Q ss_pred -HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 263 -LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 263 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
.......++.+++++..|++.||+++|+.+..+.....++...+. .. ........+.+.+. ....|.
T Consensus 238 g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~---------~~~~~~~~l~g~~~-~~~~p~ 305 (381)
T PRK03633 238 GFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ---------AAMAPALFILGAAG-FTLYPV 305 (381)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh---------HHHHHHHHHHHHHH-HhHHHH
Confidence 455566678889999999999999999988877776666554332 10 01112222233222 233466
Q ss_pred hhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 014286 342 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
..+.+.|..|+++++.+.+..+...++|..++|.+.|.+.|+.|+...|.+.+.+.++..+..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 306 AMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 666788888888888888888888999999999999999999999989988877776655444
No 23
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.3e-28 Score=206.22 Aligned_cols=357 Identities=20% Similarity=0.273 Sum_probs=255.3
Q ss_pred chhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhh
Q 014286 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (427)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~ 125 (427)
.+.++...+....+...+.+..-...-+.|...+.++.+ ..+..++......|..+++..||.++|++|||+.+.+..
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s--~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPS--EGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchh--hhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 344555666777777777666666666778888888864 444489999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeeccc--------------------------------------
Q 014286 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT-------------------------------------- 167 (427)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~-------------------------------------- 167 (427)
....+...+.+.++|+..+.+.|.+.|+|.|+.......+.-
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr 230 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWR 230 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 999999999999999999999999999999973322222111
Q ss_pred ---------------------CCchhhhhcCChHHHHHHHHHHhCCCchhhHH-------HHHhh---------hhcCCC
Q 014286 168 ---------------------ESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSL-------AELSK---------LDRGDD 210 (427)
Q Consensus 168 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---------~~~~~~ 210 (427)
||||++..+++..++...+..+...+..+.+. ++..+ ..+..+
T Consensus 231 ~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~k 310 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAK 310 (528)
T ss_pred HHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhcccc
Confidence 89999999999999988888776544322110 00000 001112
Q ss_pred CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcC--------------------CChh---HHHHH
Q 014286 211 GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAG--------------------LSSG---LANVF 267 (427)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------------------~~~~---~~~~~ 267 (427)
+...+..+++..+.++..++....++...+..+..+.. ...+++... .+.. .-..+
T Consensus 311 e~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLl-ttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdlli 389 (528)
T KOG0253|consen 311 EVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLL-TTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLI 389 (528)
T ss_pred ccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHH
Confidence 33455677777666666666666666555544443332 222222110 0111 34566
Q ss_pred HHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhcc
Q 014286 268 VGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLP 347 (427)
Q Consensus 268 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (427)
..+..++|.++.+++.||+|||+.+....++.+++.+++....... ...+..+..-.+.. +...+.+.|..
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn--------~~tvllf~arafis-g~fqvaYvYtP 460 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN--------AYTVLLFTARAFIS-GAFQVAYVYTP 460 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc--------hhHHHHHHHHHHHh-chheEEEEecC
Confidence 7788999999999999999999999999999888877766544321 22222333333333 33445566999
Q ss_pred CcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCCCCCCH
Q 014286 348 EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 416 (427)
Q Consensus 348 ~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (427)
|++|+..|+++.|....+..+|+++.|.++ +........+..+.+++++++.+...++.-|+|+|++
T Consensus 461 EVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 461 EVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred cccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999999999999999999999999999998 4444556667778899999998888888889998864
No 24
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=9.1e-27 Score=212.01 Aligned_cols=346 Identities=14% Similarity=0.078 Sum_probs=230.4
Q ss_pred HHHHHHHHHhhhhhccccccccchhhhhhh-ccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 50 FPHVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
++.+....++.+.......+.+++.+.+.+ |+|++.++. +++.+++.++++++.++.|++.||+|.|+++.++.+++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~--g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQL--FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 345566666666666777788888888876 899876665 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-----hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH---------------
Q 014286 129 IIGASISATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK--------------- 188 (427)
Q Consensus 129 ~~~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------------- 188 (427)
++.+++.+++ +|++.+++.|++.|++ |..++.....+.+ |+ .+++...+......
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~---wf-p~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISF---FF-PKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHH---HC-CHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999999987 8999999999999998 6666666666654 22 22222222221100
Q ss_pred -----H---hCCCc----------hh------hH-------HHH-HhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHH
Q 014286 189 -----L---LGGSH----------VK------SS-------LAE-LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFA 236 (427)
Q Consensus 189 -----~---~~~~~----------~~------~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
+ .+... .+ .. ..- ..++.++++.+.....+.+|+++.|...+.+++.+
T Consensus 186 ~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~~~~~~~~vlk~~~~Wllslly~~tF 265 (462)
T PRK15034 186 VIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATF 265 (462)
T ss_pred HHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCHHHHHHHhCCCchhHHHHHHHHHH
Confidence 0 00000 00 00 000 00111112223445667888888877666555544
Q ss_pred hhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcC
Q 014286 237 LQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY 313 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (427)
. .+..+.++.|++.++ .++.. ....+..+...+.++++|+++||+|+++++..+.+...++...+.....
T Consensus 266 G----~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp-- 338 (462)
T PRK15034 266 G----SFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP-- 338 (462)
T ss_pred H----HHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc--
Confidence 3 344444455555443 22222 2234445677888899999999999999999888777666544333221
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCc---------------------cchhhHHHHHHHHHHHHHHH
Q 014286 314 IPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPS---------------------RIRAKAMAVCMSVHWVINFF 372 (427)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~~g~~~g~~~~~~~~g~~~ 372 (427)
.....+.+.....++......+.+..++.. ++.+.+|+ ++.|.+.|+....+.+|+++
T Consensus 339 ~~~~~~~~~~~~~~~~l~~~~G~gngsvfk-~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~ 417 (462)
T PRK15034 339 GTGSGNFIAFYAVFMGLFLTAGLGSGSTFQ-MIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFF 417 (462)
T ss_pred cccccHHHHHHHHHHHHHHHhcccchHHHH-hhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccch
Confidence 111223344444444444555555556555 66677764 15789999999999999999
Q ss_pred HHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHhccC
Q 014286 373 VGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 373 ~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
.|.+.|...+..| +...|+.+.+..+++.++.+....+
T Consensus 418 ~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 418 IPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred hhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999988877 6777888888888887777665543
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.96 E-value=2.7e-27 Score=219.80 Aligned_cols=330 Identities=19% Similarity=0.170 Sum_probs=209.7
Q ss_pred hHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
+++.....+.++.+.++++....+++.|.+.+++|++.++. |++.+++.++..+++++.|.++||+|||++++.+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDA--ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 44556778889999999999999999999999999877666 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------------------H
Q 014286 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------------------L 189 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------------~ 189 (427)
.++++++++++++++.+++.|+++|++.+...+....++.|.. .+++...+...... .
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 162 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESW----PKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV 162 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhC----ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999988888777776521 11111100000000 0
Q ss_pred hCC--------------------CchhhHHHHHhhhhcCCCCCcchhHhhhc-------------------ccchhH-HH
Q 014286 190 LGG--------------------SHVKSSLAELSKLDRGDDGDIVKFEELLY-------------------GRHFRV-VF 229 (427)
Q Consensus 190 ~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~-~~ 229 (427)
.+. ...++..+..++ +++++......++..+ .+..+. ..
T Consensus 163 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (405)
T TIGR00891 163 WGDGWRALFFISILPIIFALWLRKNIPEAEDWKEK-HAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFV 241 (405)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH-hhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHH
Confidence 000 000000000000 0000000000000000 011111 11
Q ss_pred HHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHH
Q 014286 230 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 306 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~ 306 (427)
.......+..........++.++..++.|.+.. .......++.+++.++.+++.||++||+.+..+..+..+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 242 YLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHH
Confidence 111111111111112222233344455677765 45566778889999999999999999998877766543332222
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 014286 307 VAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG- 385 (427)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g- 385 (427)
.... ...+...+...+.+. ...+..+....++.|.+|+++|+++.|+.+.+.++|..++|.+.|.+.|..|
T Consensus 322 ~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~ 393 (405)
T TIGR00891 322 FAIG-------ANVAVLGLGLFFQQM-LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE 393 (405)
T ss_pred HHhC-------CchHHHHHHHHHHHH-HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 1111 111222222222222 2223344555688999999999999999999999999999999999999999
Q ss_pred cchhHHH
Q 014286 386 PQLLYSI 392 (427)
Q Consensus 386 ~~~~~~~ 392 (427)
|...+..
T Consensus 394 ~~~~~~~ 400 (405)
T TIGR00891 394 YGTALAS 400 (405)
T ss_pred cchhHHh
Confidence 7655543
No 26
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=6.1e-27 Score=218.42 Aligned_cols=324 Identities=19% Similarity=0.217 Sum_probs=196.2
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHH-----HHHHHHHHHhHHhhhcccchhHHHHHhhH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC-----LGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~-----~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 126 (427)
.....+++.+.+++|+..+++..|.+.+|++.++.+.. ++..+.. .++..+++++.|+++||+|||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 94 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFA-SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchH-HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHH
Confidence 47788889999999999999999999999998766542 2333322 23335789999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhH--------HHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH------------
Q 014286 127 PMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF------------ 186 (427)
Q Consensus 127 ~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------------ 186 (427)
++.+++++++++++++ .++++|+++|++.+...+....++.|. .+++++.......
T Consensus 95 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~----~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 95 IMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEI----ATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhh----CCcccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987 468999999999999888777777762 2222222111100
Q ss_pred --HHHh----------CCCch----------h--hHHHH-Hhhhhc-CCCCCcchhHhhhcc--cchhHHHHHHHHHHhh
Q 014286 187 --EKLL----------GGSHV----------K--SSLAE-LSKLDR-GDDGDIVKFEELLYG--RHFRVVFIGSTLFALQ 238 (427)
Q Consensus 187 --~~~~----------~~~~~----------~--~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 238 (427)
.... ...+. . ....+ .++.++ .+++++.+.++.+++ ++++...........
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAM- 249 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHH-
Confidence 0000 00000 0 00000 000000 000001111222211 111222222222222
Q ss_pred hccchhHHHHhHHHHHHh-cCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHH-HHHHHhhcC
Q 014286 239 QLSGINAIFYFSSSVFKS-AGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA-IQVAASSSY 313 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 313 (427)
....+.....|.|.++++ .|.+.. ....+..++.+++.++.|+++||++||+.+..+..+..+... .+.....
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-- 327 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA-- 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc--
Confidence 222344555666766654 677755 455567788889999999999999999987766544332221 1111111
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHhccc
Q 014286 314 IPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV-INFFVGLLFLRLLEQLGPQ 387 (427)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g~~ 387 (427)
.. ..........+.+.+++. ..+....+..|.+|++.|+++.|+.+.+... ++.++|.+.|.+.|..|+.
T Consensus 328 --~~-~~~~~~~~~~~~~~~~g~-~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 328 --AP-SFARMLAVELWLSFLYGS-YNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred --CC-chHHHHHHHHHHHHHHHH-HHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 11 111111212222223322 2333445788999999999999997666654 5888999999999998863
No 27
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=8.6e-27 Score=215.06 Aligned_cols=330 Identities=16% Similarity=0.144 Sum_probs=208.7
Q ss_pred HHHhhhhhccccccccchhhh-hhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHH
Q 014286 56 ATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (427)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 134 (427)
+.++.+......+...|.+|. +.+|+|.|.++. |++.+++.+++.++++++|+++||+||||+++.+.+...++.+.
T Consensus 20 ~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~--g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 97 (392)
T PRK12382 20 IAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMV--GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLA 97 (392)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHH--HHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 333444444556777788885 578999876665 99999999999999999999999999999999998887776654
Q ss_pred HHh--------hhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHH----------H-----HhC
Q 014286 135 SAT--------TRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFE----------K-----LLG 191 (427)
Q Consensus 135 ~~~--------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----------~-----~~~ 191 (427)
+.. .+|++.++++|+++|++.+...+...+++.|. ..++++..+..... . +..
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~----~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~ 173 (392)
T PRK12382 98 YLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGL----VGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS 173 (392)
T ss_pred HHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----CCccccchhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 322 35889999999999999998777666655441 11111111111100 0 000
Q ss_pred -CCch------------h-hHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhc
Q 014286 192 -GSHV------------K-SSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA 257 (427)
Q Consensus 192 -~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (427)
.... . ....+.++. +.+++++.+.++..+. .+...+...+... .......+.+.+.++.
T Consensus 174 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~ 246 (392)
T PRK12382 174 HFGFAALALTTMVLPLLAWAFNGTVRKV-PAHAGERPSLWSVVGL--IWKPGLGLALQGV----GFAVIGTFVSLYFASK 246 (392)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHhccCC-CCCcccCchHHHHHHH--HHHhHHHHHHHHH----HHhHHHHHHHHHHHhc
Confidence 0000 0 000011111 1111112223333321 1111111111111 1223334444455555
Q ss_pred CCChh-HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhh
Q 014286 258 GLSSG-LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFAL 336 (427)
Q Consensus 258 g~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (427)
+.+.. ......+++.+++++..|++.||+++|+.+..+..+.+++..++....+ .+.......+.+.+.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~g~~~~~ 318 (392)
T PRK12382 247 GWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT--------AWVALAGAALTGAGCSL 318 (392)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc--------HHHHHHHHHHHHHHHHh
Confidence 65544 4455566777889999999999999999988888777777665543221 12333334444444433
Q ss_pred cccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHh
Q 014286 337 GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 337 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
..+.......|.+|+++||++.|+.+...++|..++|.+.|.+.|+.||+..|.+.+++.+++.++....
T Consensus 319 -~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 319 -IFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred -HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 2344444677888999999999999999999999999999999999999999999888887777666544
No 28
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.96 E-value=7e-27 Score=216.10 Aligned_cols=334 Identities=13% Similarity=0.071 Sum_probs=211.2
Q ss_pred hHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
.++.++..++++++.+++|+..++...|.+.+|+|++.++. |++.+++.+++.+++++.|+++||+|||+++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMF--GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 34567788888889999999999999999999999876666 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCC-ch--------------------------hhhhc----
Q 014286 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTES-PH--------------------------WLYKK---- 176 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~-~~--------------------------~~~~~---- 176 (427)
++++++++++++|++.+++.|+++|++.+...+....++.|- |+ ++...
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999998887776666641 10 00000
Q ss_pred --CChHHHHHHHH---------HHhCCCchh-------h-HHHHHhhh---hc-----CC-C--CC----cchhHhhhcc
Q 014286 177 --GRTAEAEAEFE---------KLLGGSHVK-------S-SLAELSKL---DR-----GD-D--GD----IVKFEELLYG 222 (427)
Q Consensus 177 --~~~~~~~~~~~---------~~~~~~~~~-------~-~~~~~~~~---~~-----~~-~--~~----~~~~~~~~~~ 222 (427)
..++....... ......+.+ + +.+...+. +. .+ . +. +..+++++ +
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 01111110000 000000000 0 00000000 00 00 0 00 01122222 2
Q ss_pred cchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhc--CCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchh-hhhh
Q 014286 223 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA--GLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALL-QWSF 296 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~ 296 (427)
+..+...+ .. +.....+..+..|.|.++++. +.+.. .......++.+++.++.|+++||+++|+.. ....
T Consensus 242 ~~~~~~~~---~~-~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~ 317 (412)
T TIGR02332 242 PAIMLYTL---AY-FCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY 317 (412)
T ss_pred hHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence 32222222 22 222223445556777777664 44433 466777888999999999999999977643 3333
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014286 297 FSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 376 (427)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 376 (427)
....++..+ .... +.. ........+...+.. ...+.......|.+|+++|+++.|+.+...++|++++|.+
T Consensus 318 ~~~~~~~~~-~~~~------~~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~ 388 (412)
T TIGR02332 318 LFAAAGWLL-ASAT------DHN-LIQLLGIIMASMGSF-SAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFL 388 (412)
T ss_pred HHHHHHHHH-HHhc------CCH-HHHHHHHHHHHHHhh-hhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 333333211 1111 111 111111222221111 1123334455678899999999999999999999999999
Q ss_pred HHHHHHHhc-cchhHHHHHHHH
Q 014286 377 FLRLLEQLG-PQLLYSIFGTFC 397 (427)
Q Consensus 377 ~g~l~~~~g-~~~~~~~~~~~~ 397 (427)
.|.+.|..| |...+.+.+++.
T Consensus 389 ~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 389 IGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred cccccccCCCCchhHHHHHHHH
Confidence 999999886 887777665543
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=2.3e-26 Score=211.08 Aligned_cols=340 Identities=14% Similarity=0.123 Sum_probs=213.7
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
+....+..+..+.......+.+|.+++|+|++.++. |++.+.+.+++.++++++|+++||+|||+++..+.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAA--GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHH--hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 445556667777777788889999999999876666 999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH------HHHHhCCC---------chhh
Q 014286 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE------FEKLLGGS---------HVKS 197 (427)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~~~---------~~~~ 197 (427)
+++++++|++.+++.|+++|++.+...+....++.+. ..+++...+... +....+.. ..+.
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~ 158 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKI----IKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRY 158 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh----CChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHH
Confidence 9999999999999999999999988776666555541 111111111111 00000000 0000
Q ss_pred ---------------HHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh
Q 014286 198 ---------------SLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG 262 (427)
Q Consensus 198 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 262 (427)
.....++.+++++.+.....+.++++..+.......+. .........+..+++.+..|.++.
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~s~~ 235 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDIRDEAKGGLREQFHFLRSPAPWLIFAATMFG---NAGVFAWFSYIKPYMMFISGFSET 235 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcccccCHHHHHHHhcChHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcCCCHH
Confidence 00001111111111111122344444444332222211 111122223334455555787766
Q ss_pred ---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhccc
Q 014286 263 ---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG 339 (427)
Q Consensus 263 ---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (427)
......+++.++++++.+++.||+++|+.+..+..+.+++.+++...... .+.......+.+.+......
T Consensus 236 ~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 308 (382)
T PRK10091 236 SMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGM-------KTASLIFAFICCAGLFALSA 308 (382)
T ss_pred HHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHhhhH
Confidence 55667778889999999999999999998888877777666554332211 12222333333333322223
Q ss_pred chhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 340 PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LGPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
+.......+..|.+.++.+ ..+...++|..+||.+.|.+.|. .+|+..+.+.++++.+.......+.++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK10091 309 PLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRY 378 (382)
T ss_pred HHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3333344555555555544 34677889999999999999996 578888888877776666555444443
No 30
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=9.9e-27 Score=218.02 Aligned_cols=341 Identities=11% Similarity=0.074 Sum_probs=204.0
Q ss_pred HHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
.|.++...++.....+.++..+++.+|.+.++ |++.++. |++.+++.+++.++++++|+++||+|||++++.+.+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~--g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDL--GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHH--HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 34445555566666666666667788988888 8876655 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----hhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH-----------HH-----
Q 014286 129 IIGASISATTR----NLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF-----------EK----- 188 (427)
Q Consensus 129 ~~~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----------~~----- 188 (427)
+++.+++++++ +++.+++.|++.|++.+...+.....+.+ |+ .+++...+.... ..
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~---~~-~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~ 179 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVH---WW-SQKERGGIVSVWNCAHNVGGGLPPLLFLLG 179 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHH---hC-ChHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 99999988764 78889999999999998877655544442 11 000000000000 00
Q ss_pred H-hCCC---------------------chhhHHHH--------Hhhhhc----CCCCCcchhH-----hhhcccchhHHH
Q 014286 189 L-LGGS---------------------HVKSSLAE--------LSKLDR----GDDGDIVKFE-----ELLYGRHFRVVF 229 (427)
Q Consensus 189 ~-~~~~---------------------~~~~~~~~--------~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~~ 229 (427)
. .... ..++..++ .+++.+ .++.++.+.+ ..++++..+...
T Consensus 180 ~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (452)
T PRK11273 180 MAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIA 259 (452)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHH
Confidence 0 0000 00000000 000000 0000111122 244555555444
Q ss_pred HHHHHHHhhhccchhHHHHhHHHHHH-hcCCChh---HHHHHHHHHHHHHHHhHhhhhccc--Cccchhh-hhhHHHHHH
Q 014286 230 IGSTLFALQQLSGINAIFYFSSSVFK-SAGLSSG---LANVFVGIANLLGSVVAMVLMDKL--GRKALLQ-WSFFSMAVS 302 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~-~~~~~~~~~ 302 (427)
+...+... .......+.|.+++ ..|++.. ....+..++.+++.++.|+++||+ +||+... ....+..++
T Consensus 260 l~~~~~~~----~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~ 335 (452)
T PRK11273 260 IANVFVYL----LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 335 (452)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 44333332 22333445565554 4576654 445566778888999999999998 4444322 222222222
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHH-HHHHHHHHH
Q 014286 303 MAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFF-VGLLFLRLL 381 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~ 381 (427)
...+.... ....+.........+... .+.......+..|.+|++.||++.|+.+...++|+.+ +|.+.|.+.
T Consensus 336 ~~~~~~~~------~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 336 TIVYWLNP------AGNPTVDMACMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred HHHHHHhc------ccChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 22221111 111112222222222211 1112223335678999999999999999999998765 799999999
Q ss_pred HHhccchhHHHHHHHHHHHHHHHHHh
Q 014286 382 EQLGPQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 382 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
|+.||+..|.+++++++++.+....+
T Consensus 409 ~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 409 DFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888777776655433
No 31
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=7.7e-26 Score=210.86 Aligned_cols=346 Identities=15% Similarity=0.103 Sum_probs=207.6
Q ss_pred HHHHHHHHHhhhhhccccccccchhhh-hhhcc--CCCCchhHHHHHH-----HHHHHHHHHHHHhHHhhhcccchhHHH
Q 014286 50 FPHVLVATLSSFLFGYHLGVVNEPLES-ISLDL--GFNGNTLAEGLVV-----SMCLGGAFIGSTLSGWIADGVGRRRAF 121 (427)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~~~~~~~~g~~~-----s~~~l~~~~~~~~~G~l~dr~Grr~~l 121 (427)
++.+....++.+.+++|...++.+.|. +.+++ +.++. + +++. ++.+++..+++++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA--M-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH--H-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 346777888999999999998888774 45555 45443 2 5543 345567789999999999999999999
Q ss_pred HHhhHHHHHHHHHHHhhhhhH--------HHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHH---------
Q 014286 122 QLCALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEA--------- 184 (427)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------- 184 (427)
+.+.++++++++++++++|++ .++++|+++|++.|+..+....++.|. ..++++.....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~----~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVES----APKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHh----CCCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 588999999999999998888888762 11111110000
Q ss_pred -HHH-----HHh---------CCCc----------------hhh---HHHHH-hhh-hcCCCCCcchhH-hhhcccchhH
Q 014286 185 -EFE-----KLL---------GGSH----------------VKS---SLAEL-SKL-DRGDDGDIVKFE-ELLYGRHFRV 227 (427)
Q Consensus 185 -~~~-----~~~---------~~~~----------------~~~---~~~~~-~~~-~~~~~~~~~~~~-~~~~~~~~~~ 227 (427)
.+. .+. ...+ .+. +.++. ++. +.++.+++.+.. .++++++.+.
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 253 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFL 253 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHH
Confidence 000 000 0000 000 00000 000 000111111222 3444443333
Q ss_pred HHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHH
Q 014286 228 VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 304 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 304 (427)
.... ...+.....+....+..++..+..|.+.. ......++..+++.++.|+++||+|||+.+..+.++..++..
T Consensus 254 ~~~~--~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~ 331 (438)
T PRK09952 254 KIIA--LRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAF 331 (438)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 2221 11222222222223333344455677765 234445666778888999999999999988877665554433
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 014286 305 IQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHW-VINFFVGLLFLRLLEQ 383 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~ 383 (427)
.+...... ....+..+....+.+++.+.. .+..++++.|.+|++.|+++.|+.+.... +++.++|.+.+.+.+.
T Consensus 332 ~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~ 406 (438)
T PRK09952 332 PFFMALEA----QSIFWIVFFSIMLANIAHDMV-VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTY 406 (438)
T ss_pred HHHHHHHc----CChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33222110 111122222222223333322 34455688999999999999999776655 8999999999999886
Q ss_pred hc--cchhHHHHHHHHHHHHHHHHHhccC
Q 014286 384 LG--PQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 384 ~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
.+ |...+...+++.+++.+..+ ..++
T Consensus 407 ~~~~~~~~~~~~~~~~~i~~v~~~-~~~~ 434 (438)
T PRK09952 407 FGGSWHSVAIYLLAGCLISAMTAL-LMKD 434 (438)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHH-Hccc
Confidence 53 66667666666666655553 3444
No 32
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.95 E-value=7.6e-27 Score=220.93 Aligned_cols=323 Identities=13% Similarity=0.025 Sum_probs=212.3
Q ss_pred HHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
.+..+..++++.++..+|.++++..+|.+.+|+|.+.++. +|+.+.|.+++.++++++|+++||+|||++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~--~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNEL--LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3557888999999999999999999999999999876666 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCC--c-hh-------------------------hhhcCChH
Q 014286 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTES--P-HW-------------------------LYKKGRTA 180 (427)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~--~-~~-------------------------~~~~~~~~ 180 (427)
.++++++++++|++.++++|+++|+|.+...+.....+.+. + +. +.....+.
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr 161 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence 99999999999999999999999999998777654433210 0 00 00000000
Q ss_pred HHHHH---------HHH-HhCCCchhh-----HHH--------------HHhhh--------------------------
Q 014286 181 EAEAE---------FEK-LLGGSHVKS-----SLA--------------ELSKL-------------------------- 205 (427)
Q Consensus 181 ~~~~~---------~~~-~~~~~~~~~-----~~~--------------~~~~~-------------------------- 205 (427)
..... ... ......... +.. ..++.
T Consensus 162 ~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~ 241 (495)
T PRK14995 162 SVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIR 241 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 00000 000 000000000 000 00000
Q ss_pred hcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHH-HHHhcCCChh---HHHHHHHHHHHHHHHhHhh
Q 014286 206 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSS-VFKSAGLSSG---LANVFVGIANLLGSVVAMV 281 (427)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~ 281 (427)
.+.+.+++.-..+++|++.+....+..+.... ......++.|. +....|.++. ....+..++..++.++.|+
T Consensus 242 ~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~ 317 (495)
T PRK14995 242 TQLAASRPMIDMRLFTHRIILSGVVMAMTAMI----TLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGI 317 (495)
T ss_pred HHhcCCCCCcCHHHhCCcccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000111245555554443333322222 12222334444 4445677765 5677778888999999999
Q ss_pred hhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHH
Q 014286 282 LMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAV 361 (427)
Q Consensus 282 l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 361 (427)
+.||+|+|+.+..+..+.+++...+..... ....+.......+.+.+.+....+... ...+..|+++++.+.++
T Consensus 318 l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~l~G~g~g~~~~~~~~-~~~~~~~~~~~g~~~~~ 391 (495)
T PRK14995 318 LVSRLGLRLVATGGMALSALSFYGLAMTDF-----STQQWQAWGLMALLGFSAASALLASTS-AIMAAAPPEKAAAAGAI 391 (495)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHhHHHHHHHHHH-HHHhcCCHHhcchHHHH
Confidence 999999999888887777766655543321 112223334445555555544444444 66677899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014286 362 CMSVHWVINFFVGLLFLRLLEQ 383 (427)
Q Consensus 362 ~~~~~~~g~~~~~~~~g~l~~~ 383 (427)
.++..++|+.+|+.+.|.+.++
T Consensus 392 ~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 392 ETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988763
No 33
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.95 E-value=6.6e-26 Score=208.35 Aligned_cols=334 Identities=18% Similarity=0.128 Sum_probs=211.1
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
.++.+.++.+..........+.+|.+.+++|++.++. |+..+.+.++..+++++.|+++||+|||++++.+.++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~ 98 (394)
T PRK10213 21 AVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVA--GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS 98 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH
Confidence 3334444433333343355567899999999876666 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------Hh---------CC-Cc-
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------LL---------GG-SH- 194 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~---------~~-~~- 194 (427)
++++++++|++.++++|+++|++.+...+....++.| ...+++...+...... .. .. .+
T Consensus 99 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~----~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 99 CLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMR----LVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHH----HcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 9999999999999999999999999988888877765 2222222222211110 00 00 00
Q ss_pred ----------h---hhHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCCh
Q 014286 195 ----------V---KSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS 261 (427)
Q Consensus 195 ----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 261 (427)
. .......++.++++++...+.++.++++..+...+..++..... .....+..|.+.++.|.+.
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~g~s~ 251 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQ---FAFFTYIRPVYMNLAGFGV 251 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCcccccchhHHHHHhcCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCh
Confidence 0 00000111111111122233456677766665444333333221 2222333466667778776
Q ss_pred h---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcc
Q 014286 262 G---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGA 338 (427)
Q Consensus 262 ~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (427)
. ......+++.+++.++.+++.||.+ |+.+..+..+..+...++..... ..+.......+.+.+++..
T Consensus 252 ~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~l~G~~~~~~- 322 (394)
T PRK10213 252 DGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGS-------DKIVATGVAIIWGLTFALV- 322 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHhh-
Confidence 5 4566677888999999999999954 44444333333333222222111 1233334444455444433
Q ss_pred cchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 014286 339 GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
.+...+.+.+..| ++++.+.++.....++|..+|+.+.|.+.|..|+...+...+++.++..+..
T Consensus 323 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 323 PVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred hHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHH
Confidence 3434436667667 5567888888888899999999999999999998878877766655554433
No 34
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=1.4e-26 Score=213.49 Aligned_cols=333 Identities=14% Similarity=0.088 Sum_probs=214.1
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
....++++.+..+.+....++.+|.+.+++|++.++. +++.+.+.+++.++++++|++.||+|||+++..+.++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSM--SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4556677778888888888999999999999876655 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH---------------HHHhCCC-ch
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF---------------EKLLGGS-HV 195 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~-~~ 195 (427)
.+++++++|++.++++|+++|++.|...+....++.|. ..+++........ ..+.... ..
T Consensus 86 ~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~----~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 86 VAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHV----YEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhh----cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 99999999999999999999999998887777776652 1211111111000 0000000 00
Q ss_pred hhH---------------H-HHHhhhhcCCC-CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH-Hhc
Q 014286 196 KSS---------------L-AELSKLDRGDD-GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSA 257 (427)
Q Consensus 196 ~~~---------------~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 257 (427)
+.. . .+.++.+++++ +.+...++.+ ++..+...+..++... .......|.|.+. +..
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~p~~l~~~~ 236 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFSEFPALGKHAPKADKPVAKEKW-GIGVLFLAIAALLYIL----AQLTFISWVPEYAQKKF 236 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccCccccCccccccC-ChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHc
Confidence 000 0 00000000000 0011111111 1122222222222221 2333445566555 556
Q ss_pred CCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH
Q 014286 258 GLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTF 334 (427)
Q Consensus 258 g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (427)
|.+.. .......++..+++++.++++||+++|+.+.....+..+...++....+ .+......++.+.+.
T Consensus 237 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~G~~~ 308 (394)
T PRK03699 237 GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDD--------PSHLLYAILGLGFFS 308 (394)
T ss_pred CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCC--------chHHHHHHHHHHHHH
Confidence 88765 4556667788999999999999999998887766655554433332111 112222233333322
Q ss_pred hhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 335 ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
+ ...+...++..|..| +.++...+......++|..++|.+.|.+.+..|++..+++.+++++++.+...
T Consensus 309 ~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (394)
T PRK03699 309 S-AIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCI 377 (394)
T ss_pred H-HHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHH
Confidence 2 233444446666666 45678889999999999999999999999999999898888877776655443
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.95 E-value=1.1e-26 Score=221.13 Aligned_cols=339 Identities=17% Similarity=0.188 Sum_probs=212.7
Q ss_pred hHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
+.+..+..++++.+.+.++....++.+|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQA--ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 44556777888888888999999999999999999876655 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH------HH---------HhCC
Q 014286 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF------EK---------LLGG 192 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~---------~~~~ 192 (427)
.+++.+++++++|++.+++.|++.|++.+...+....++.|.. .+++........ .. +...
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 170 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESW----PKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV 170 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999888777777666521 111100000000 00 0000
Q ss_pred -C----------------chhhHHHHHh--hhhcCCCCCcchhHhh-hcccc-hh-------------------------
Q 014286 193 -S----------------HVKSSLAELS--KLDRGDDGDIVKFEEL-LYGRH-FR------------------------- 226 (427)
Q Consensus 193 -~----------------~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~-~~------------------------- 226 (427)
. ......++.+ +.+++++....+..+. .+.+. ..
T Consensus 171 ~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (496)
T PRK03893 171 WGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAI 250 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhH
Confidence 0 0000000000 0000000000111111 10000 00
Q ss_pred ------------------------HHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHh
Q 014286 227 ------------------------VVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVV 278 (427)
Q Consensus 227 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~ 278 (427)
..........+..+........+.|.+. ++.|.+.. .......++.+++.++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~ 330 (496)
T PRK03893 251 VAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCV 330 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000001111233455555 47778765 5666777888899999
Q ss_pred HhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhH
Q 014286 279 AMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKA 358 (427)
Q Consensus 279 ~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 358 (427)
.|+++||++||+.+..+..+..+..+.+.... ....+.... ......+.+.+..+....++.|.+|++.||++
T Consensus 331 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 403 (496)
T PRK03893 331 GGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG------GANVWVLGL-LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAG 403 (496)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc------ccHHHHHHH-HHHHHHHHhcccchhhHHHHHhhCCHHHhhcc
Confidence 99999999999988777655554443322211 111122111 22222222333344555588899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 359 MAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 359 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
+|+.+....+|+.++|.+.|.+.|..|+...+...++++.+
T Consensus 404 ~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 404 LGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred cchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777655544433
No 36
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=1.6e-26 Score=214.25 Aligned_cols=340 Identities=16% Similarity=0.104 Sum_probs=216.9
Q ss_pred chhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhh
Q 014286 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (427)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~ 125 (427)
.++.+...+.+.+..+...++...+.|.+|.+.+++|.+.++. ++..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWV--PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 3455666777777888888888888999999999999876555 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------H----------
Q 014286 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------L---------- 189 (427)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~---------- 189 (427)
.+.+++.+++.++++++.+++.|+++|++.+...+....++.|. ..+++.......... .
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 86 AFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQES----FEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHH----hChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887776666665541 111111111110000 0
Q ss_pred --hCCCch------------hhHHHHHhhhhcCC-CC-----CcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHh
Q 014286 190 --LGGSHV------------KSSLAELSKLDRGD-DG-----DIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYF 249 (427)
Q Consensus 190 --~~~~~~------------~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
.+.... .......++.++++ ++ ...++++.++++..+...+...+..... .....+
T Consensus 162 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 237 (406)
T PRK15402 162 HVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPL----LAWIAL 237 (406)
T ss_pred HccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH----HHHHHH
Confidence 000000 00000011111100 00 1123455666766655444433332211 112222
Q ss_pred HHHH-HHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q 014286 250 SSSV-FKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 325 (427)
Q Consensus 250 ~~~~-~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (427)
.|.+ .+..+.++. .......++.+++.++.+++.||+++|+.+..+..+..++..++....... ....+....
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~ 314 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS---SHAYLWLTA 314 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc---cccHHHHHH
Confidence 3433 355677765 334445567788999999999999999988888877777766665543211 112223334
Q ss_pred HHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 326 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
...+.+.+.+....+... ..... +++++|++.++.+....++..+|+.+.+.+.+..+........++..++.
T Consensus 315 ~~~~~g~g~~~~~~~~~~-~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYR-LTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHhhhHHH-HHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 444455544433333222 33333 34889999999999999999999999999988777654443333333333
No 37
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.2e-26 Score=217.49 Aligned_cols=322 Identities=16% Similarity=0.183 Sum_probs=209.4
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
+..++++.+...++...+++.+|.+.+++|.+..+. +++.+.+.++..++.+++|+++||+|||++++.+.++++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHM--HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 445666777778888888899999999999866555 899999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccceeecccCC-ch--------------------------hhhhcCChHHHHHH
Q 014286 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTES-PH--------------------------WLYKKGRTAEAEAE 185 (427)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~-~~--------------------------~~~~~~~~~~~~~~ 185 (427)
++++++++++.++++|+++|++.+...+....++.|. |+ ++.....+......
T Consensus 90 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~ 169 (471)
T PRK10504 90 LFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLI 169 (471)
T ss_pred HHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHH
Confidence 9999999999999999999999998887776665541 10 00000000000000
Q ss_pred H------H----HHhCCCch----hhHHHH--------------Hhh---------------------------hhcCCC
Q 014286 186 F------E----KLLGGSHV----KSSLAE--------------LSK---------------------------LDRGDD 210 (427)
Q Consensus 186 ~------~----~~~~~~~~----~~~~~~--------------~~~---------------------------~~~~~~ 210 (427)
. . ........ +.+... ..+ +++..+
T Consensus 170 ~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (471)
T PRK10504 170 NIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN 249 (471)
T ss_pred HHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0 0 00000000 000000 000 000000
Q ss_pred CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHH-hcCCChh---HHHHHHHHHHHHHHHhHhhhhccc
Q 014286 211 GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLSSG---LANVFVGIANLLGSVVAMVLMDKL 286 (427)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~ 286 (427)
++..+ .++++++.++..+...++.... .....++.|++.+ ..|.++. +...+..++.+++.++.+++.||+
T Consensus 250 ~~~~~-~~l~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~ 324 (471)
T PRK10504 250 RALFS-LKLFRTRTFSLGLAGSFAGRIG----SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF 324 (471)
T ss_pred CCccC-HHHhcccchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11111 2456677666655544444332 3334445555555 3666654 455556667777788999999999
Q ss_pred CccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHH
Q 014286 287 GRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVH 366 (427)
Q Consensus 287 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 366 (427)
|+|+.+..+..+..+...++.+... ....+.......+.+.+.+....+. .....+..|++.++.+.|+.++..
T Consensus 325 g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~ 398 (471)
T PRK10504 325 GYRRVLVATTLGLALVSLLFMLVAL-----LGWYYLLPFVLFLQGMVNSTRFSSM-NTLTLKDLPDNLASSGNSLLSMIM 398 (471)
T ss_pred CchHHHHHHHHHHHHHHHHHHhccc-----cccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCHHhccchHHHHHHHH
Confidence 9999998888777766555543221 1112222222333334444333333 347777889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccc
Q 014286 367 WVINFFVGLLFLRLLEQLGPQ 387 (427)
Q Consensus 367 ~~g~~~~~~~~g~l~~~~g~~ 387 (427)
.+|..+++.+.|.+.+..|+.
T Consensus 399 ~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 399 QLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999887763
No 38
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=9.8e-27 Score=216.31 Aligned_cols=342 Identities=17% Similarity=0.102 Sum_probs=220.9
Q ss_pred ccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHh-----h
Q 014286 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-----T 138 (427)
Q Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~ 138 (427)
.+......+.+|.+.++++.+ ..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+. .
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~s--~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 107 (417)
T PRK10489 30 IFGLGLLGVAVPVQIQMMTGS--TLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPE 107 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCC
Confidence 334456677889988888764 445599999999999999999999999999999999988888877766543 5
Q ss_pred hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHH------HHhCCC---------chhh------
Q 014286 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFE------KLLGGS---------HVKS------ 197 (427)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~---------~~~~------ 197 (427)
++++.+++.|+++|++.+...+....++++. ..+++...+..... ...+.. ..+.
T Consensus 108 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~ 183 (417)
T PRK10489 108 PSLLAIYLLGLWDGFFGSLGVTALLAATPAL----VGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAA 183 (417)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhc----cCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHH
Confidence 6789999999999999887777666666642 11111111111100 000000 0000
Q ss_pred --------HHHHHhhhhcC---CCCCc----chhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHh-cCCCh
Q 014286 198 --------SLAELSKLDRG---DDGDI----VKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS-AGLSS 261 (427)
Q Consensus 198 --------~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 261 (427)
.....++.+++ +++.. ..++..++++..+..++...+... ......+.|.+.++ .|.+.
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~~~ 258 (417)
T PRK10489 184 AGTFITLLPLLRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-----ASAVRVLYPALADEVWQMGA 258 (417)
T ss_pred HHHHHHHHHHHhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-----HHhHHHhhHHHHHhccCCCh
Confidence 00000111000 01111 123344555554444333322221 12223344555554 67765
Q ss_pred h---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcc
Q 014286 262 G---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGA 338 (427)
Q Consensus 262 ~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (427)
. .......++.+++.++.+++.||.++++.+..+..+.+++.+++.... +.+...+...+++.+.+. .
T Consensus 259 ~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~~-~ 329 (417)
T PRK10489 259 AQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--------MWILAVLCLALFGYLSAI-S 329 (417)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--------hHHHHHHHHHHHHHHHHH-H
Confidence 5 455667788889999999999998777777777766666655444321 112233333333333322 2
Q ss_pred cchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCCCCCCHHH
Q 014286 339 GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQE 418 (427)
Q Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (427)
.+...+++.|..|++.||++.|+.+...++|..++|.+.|.+.+..|+...+...+++.++..++.....++.|+++++|
T Consensus 330 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (417)
T PRK10489 330 SLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTP 409 (417)
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 34455588899999999999999999999999999999999999999988888888877777777777788888888887
Q ss_pred HHHhhCC
Q 014286 419 IEIALLP 425 (427)
Q Consensus 419 ~~~~~~~ 425 (427)
.|++..+
T Consensus 410 ~~~~~~~ 416 (417)
T PRK10489 410 PEVDASD 416 (417)
T ss_pred ccCCCCC
Confidence 7766543
No 39
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.95 E-value=2.3e-26 Score=212.97 Aligned_cols=337 Identities=15% Similarity=0.119 Sum_probs=213.2
Q ss_pred hhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhh
Q 014286 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (427)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 139 (427)
++...++...++...|.+.+++|++..+. |++.+++.++..++++++|+++||+|||+++..+.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQY--GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhH--HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 34555677788888999999999876666 9999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhccccccceeecccCCch---------------------------hhhhcCChHHHHHH------H
Q 014286 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTESPH---------------------------WLYKKGRTAEAEAE------F 186 (427)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---------------------------~~~~~~~~~~~~~~------~ 186 (427)
|++.++++|+++|++.+...+....++.|..+ ++.....+...... .
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999888888887775210 00000011100000 0
Q ss_pred HHH---hCCCchhh-------HHHHHh-hh-------hcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHH
Q 014286 187 EKL---LGGSHVKS-------SLAELS-KL-------DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFY 248 (427)
Q Consensus 187 ~~~---~~~~~~~~-------~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
... ......+. +.++.. +. +++++..+...++.++++..+...+..++... .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 236 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNI----GLGFFLT 236 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHh----HHHHHHH
Confidence 000 00000000 000000 00 00011122334566666655544444333332 2333334
Q ss_pred hHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhh-hhhHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 014286 249 FSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQ-WSFFSMAVSMAIQVAASSSYIPGSASLYLS 323 (427)
Q Consensus 249 ~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (427)
+.+.+. +..+.+.. .......++.+++.++.+++.||++||+... .......++.+.......... .....+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 314 (399)
T TIGR00893 237 WFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATN-YVNIPYA- 314 (399)
T ss_pred HHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc-cchhHHH-
Confidence 444443 45676654 5666777888899999999999999886211 111111111111111100000 0111122
Q ss_pred HHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHH
Q 014286 324 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVA 402 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~ 402 (427)
........ +...+..+...++..|.+|+++|+++.|+.+.+.++|..++|.+.|.+.|..| +...+.+.+++.+++.+
T Consensus 315 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 393 (399)
T TIGR00893 315 ALALVALG-FFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGAL 393 (399)
T ss_pred HHHHHHHH-HhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHH
Confidence 22222222 22223567777799999999999999999999999999999999999999988 88888888877777665
Q ss_pred HHH
Q 014286 403 FVK 405 (427)
Q Consensus 403 ~~~ 405 (427)
...
T Consensus 394 ~~~ 396 (399)
T TIGR00893 394 SYL 396 (399)
T ss_pred HHH
Confidence 543
No 40
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.95 E-value=1.2e-25 Score=203.62 Aligned_cols=315 Identities=13% Similarity=0.066 Sum_probs=187.6
Q ss_pred ccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHH
Q 014286 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (427)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 147 (427)
..+++.+|.+++|+|++.++. |++.+.+.+++.+++++.|+++||+|||+++..++.....+.+.....+|++.++++
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 85 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEEL--GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC 85 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 456789999999999876655 999999999999999999999999999998776655554544333334799999999
Q ss_pred HHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHH------hC----------CCc--------------hhh
Q 014286 148 RFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKL------LG----------GSH--------------VKS 197 (427)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~----------~~~--------------~~~ 197 (427)
|+++|++.+... .....+.| |.. ++++..+....... .+ ..+ ...
T Consensus 86 R~l~G~g~~~~~-~~~~~~~~---~~~-~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 86 QLLAALGQPFLL-NAFAPAAS---QIR-EERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHhHhHHHH-HHHHHHHH---HcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 999999998543 33333332 121 12222221111100 00 000 000
Q ss_pred HHHHHhhhhcCCC--CC----cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChhHHHHHHHHH
Q 014286 198 SLAELSKLDRGDD--GD----IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIA 271 (427)
Q Consensus 198 ~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 271 (427)
.....++.++.++ .+ ..+++++++++..+...+..++... .+..+..|.|.++++.|++.. ......+.
T Consensus 161 ~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~----~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~ 235 (368)
T TIGR00903 161 VLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVA----LFDNLAIWLEAALRPAGLEDI-AGDAVALA 235 (368)
T ss_pred HHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCChH-HHHHHHHH
Confidence 0000111111000 00 1246678888777666555444443 334445677777777777654 22333344
Q ss_pred HHHHHHhHhhhhcccCcc---chhh-hhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhcc
Q 014286 272 NLLGSVVAMVLMDKLGRK---ALLQ-WSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLP 347 (427)
Q Consensus 272 ~~~~~~~~g~l~d~~g~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (427)
...+.+..++++||..|| +... ....+.++....+.... + .+..+....+.+ .+.....+..+++.+
T Consensus 236 ~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~------~--~~~~~~~~~l~~-~~~~~~~~~~~~~~~ 306 (368)
T TIGR00903 236 ILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL------N--RLALFAFIGIAG-LLMLPAYAIIMDWIG 306 (368)
T ss_pred HHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc------c--cHHHHHHHHHHH-HhhhhhHHHHHHHHH
Confidence 444555568888887654 2222 22222232222222111 1 112222222222 222233345666899
Q ss_pred CcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 348 EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 348 ~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
|.+|++.||++.|+.+..+++++..+|.+.+.+.. |....|.++++..+++.+...
T Consensus 307 ~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 307 KFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988774 666778888887777766653
No 41
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.94 E-value=2.1e-25 Score=208.71 Aligned_cols=333 Identities=15% Similarity=0.122 Sum_probs=203.7
Q ss_pred HHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHH
Q 014286 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (427)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 129 (427)
|.++..+.+...........++..+|.+.+++|.+.++. +++.+.+.++..++.+++|+++||+|||++++.+.++.+
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSET--AWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHH--HHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 444555555554444445566778999999999877776 899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHH-HHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHH-------------------
Q 014286 130 IGASISATTRNLIGMLL-GRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKL------------------- 189 (427)
Q Consensus 130 ~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------------------- 189 (427)
+++++++++++++.+++ .|+++|++.+...+....++.+ |+ .+ +...+.......
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~---~~-~~-~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 96 LGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGK---YF-YR-RRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHH---HH-Hh-hHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 99999999999998865 5799999998765555444443 22 11 111111110000
Q ss_pred ---------------------hCCCchhhHHHHHhh-hhc---C-CCCC------c---ch--hHhhhcccchhHHHHHH
Q 014286 190 ---------------------LGGSHVKSSLAELSK-LDR---G-DDGD------I---VK--FEELLYGRHFRVVFIGS 232 (427)
Q Consensus 190 ---------------------~~~~~~~~~~~~~~~-~~~---~-~~~~------~---~~--~~~~~~~~~~~~~~~~~ 232 (427)
...........+..+ .+. . ..++ . .. ..+.++++.++......
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGN 250 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHH
Confidence 000000000000000 000 0 0000 0 00 01345566555444443
Q ss_pred HHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhccc--Cccchhhhhh--HHHHHHHHH
Q 014286 233 TLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKL--GRKALLQWSF--FSMAVSMAI 305 (427)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~--~~~~~~~~~ 305 (427)
++..... .....+.+.+.++.|.+.. ....+.+++.++++++.+++.||. ++++....+. +..+++.++
T Consensus 251 ~l~~~~~----~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll 326 (455)
T TIGR00892 251 VIMFLGF----FAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL 326 (455)
T ss_pred HHHHHHc----cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 3333322 2223344545566777765 455666777888889999999974 3333333322 222222222
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 014286 306 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 385 (427)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 385 (427)
+.... +.+..++..++.+.+.+ ...+...+.+.|.+|+++++++.|+++...++|.+++|.+.|.+.+..|
T Consensus 327 ~~~~~--------~~~~~~i~~~~~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 327 CALAG--------DYTGLVIYCIFFGLSFG-SVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHhc--------hHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 22111 12233333444444433 2334555588888999999999999999999999999999999999875
Q ss_pred -cchhHHHHHHHHHHHHH
Q 014286 386 -PQLLYSIFGTFCLMAVA 402 (427)
Q Consensus 386 -~~~~~~~~~~~~~~~~~ 402 (427)
|...|.+.+++.+++.+
T Consensus 398 ~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 398 NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred CcchHHHHhhHHHHHHHH
Confidence 88888887776666544
No 42
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=4.9e-25 Score=204.76 Aligned_cols=338 Identities=18% Similarity=0.143 Sum_probs=207.5
Q ss_pred HHHHhhhhhccccccccchhhhhhhccCCCCchh---HHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL---AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
.+.++.+..++......+.+|.+.+++|++..+. ..|++.+++.++..++++++|+++||+|||+++..+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 3344555556666778889999999999876543 3488999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH------HHHhC---------CCchh
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF------EKLLG---------GSHVK 196 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~---------~~~~~ 196 (427)
.++++++++++.+++.|++.|++.+. .+....++.+. ..+++...+.... ....+ ....+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 172 (408)
T PRK09874 98 MVLMGLAQNIWQFLILRALLGLLGGF-VPNANALIATQ----VPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLR 172 (408)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHHHh----cCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 99999999999999999999997653 34444444331 1111111111100 00000 00000
Q ss_pred h---------------HHHHHhhhh-cCCCCCc---chhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhc
Q 014286 197 S---------------SLAELSKLD-RGDDGDI---VKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA 257 (427)
Q Consensus 197 ~---------------~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (427)
. .....++.. +.+++++ .+..+.++++..........+.. .. .......+.+.+..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 249 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLII--QV-ATGSIAPILTLYVREL 249 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHhCcCCchHHHHHHHHHHH--HH-HHHHHHHHHHHHHHHH
Confidence 0 000001110 0011111 11223344444332222111111 11 1111222223232222
Q ss_pred -CCChh------HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHH
Q 014286 258 -GLSSG------LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMF 330 (427)
Q Consensus 258 -g~~~~------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (427)
+.... ......+++.+++.+..|++.||++||+.+..+..+..++.+.+..... .+...+...+.
T Consensus 250 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 321 (408)
T PRK09874 250 AGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQT--------PLQLGILRFLL 321 (408)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhcc--------HHHHHHHHHHH
Confidence 21111 2334456677788888999999999999988877766655554433211 12333333344
Q ss_pred HHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 331 VLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
+.+.+. ..+...+...+..|++++|+..++.+....+|..++|.+.|.+.+..||+..|.+.+++.+++.+..++..+
T Consensus 322 g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 322 GAADGA-LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HhhhHh-hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 443332 234444466777888999999999999999999999999999999999999999998888887776655443
No 43
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=3.7e-25 Score=205.55 Aligned_cols=333 Identities=14% Similarity=0.101 Sum_probs=215.6
Q ss_pred HHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHH
Q 014286 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (427)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 129 (427)
...+..+++..+..++.....++.+|.+++++|+++++. |++.+.+.+++.+++++.|++.||+|||+++..++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~--gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~ 102 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA--GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 334455556667777888888999999999999876555 999999999999999999999999999999999999999
Q ss_pred HHHHHH---HhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHH----------HHHHHHhC-----
Q 014286 130 IGASIS---ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAE----------AEFEKLLG----- 191 (427)
Q Consensus 130 ~~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~----- 191 (427)
++++++ ++++|++.++++|+++|+|.|...+....++.+.+. ..+..... ..+....+
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~----~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGP----ESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999886 468899999999999999999998888887654211 00000000 00000000
Q ss_pred -C-C-----------------c-----------------------hhhHHHHHhhhhcCCC------CCcchhHhhhccc
Q 014286 192 -G-S-----------------H-----------------------VKSSLAELSKLDRGDD------GDIVKFEELLYGR 223 (427)
Q Consensus 192 -~-~-----------------~-----------------------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 223 (427)
. . + ........++.+.+++ ....+++++++++
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~ 258 (438)
T PRK10133 179 SNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIR 258 (438)
T ss_pred cCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCc
Confidence 0 0 0 0000000010000000 0112345677777
Q ss_pred chhHHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHH
Q 014286 224 HFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 299 (427)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 299 (427)
.++...+..++....... ...+..+++. +..|.++. .......++.++++++++++.||+++|+++..+..+.
T Consensus 259 ~~~~~~l~~~~~~~~~~~---~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~ 335 (438)
T PRK10133 259 HWRWAVLAQFCYVGAQTA---CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIA 335 (438)
T ss_pred hHHHHHHHHHHHHHHHHH---HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 776554444443332221 1222233433 35688776 5667888899999999999999999999888877666
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014286 300 AVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR 379 (427)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 379 (427)
.+...+..+.. . ......+.+.+++.+.. .|...+...+..|+ +.+++.++.. ...+|+.++|.+.|.
T Consensus 336 ~~~~~~~~~~~------~---~~~~~~~~l~glg~~~i-~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~ 403 (438)
T PRK10133 336 MALCLISAFAG------G---HVGLIALTLCSAFMSIQ-YPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGF 403 (438)
T ss_pred HHHHHHHHHcC------C---hHHHHHHHHHHHHHHHH-HHHHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHH
Confidence 55544433321 1 11233344455555544 45555577787774 5678888876 455789999999999
Q ss_pred HHHHhc-cchhHHHHHHHHHHHHHH
Q 014286 380 LLEQLG-PQLLYSIFGTFCLMAVAF 403 (427)
Q Consensus 380 l~~~~g-~~~~~~~~~~~~~~~~~~ 403 (427)
+.|..| .+..|++...+.+...+.
T Consensus 404 l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 404 VSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHH
Confidence 999887 677776555444444333
No 44
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.94 E-value=5.3e-25 Score=203.40 Aligned_cols=322 Identities=14% Similarity=0.088 Sum_probs=198.8
Q ss_pred cccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHH---h-hhhhHHH
Q 014286 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---T-TRNLIGM 144 (427)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l 144 (427)
...+.++.+.+|+|.+.++. |++.+.+.+++.++++++|+++||+|||+++..+.++++++++++. + .++++.+
T Consensus 31 ~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSPQQS--ASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLI 108 (402)
T ss_pred hHHHhHHHHHHHhCCCHHHh--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHH
Confidence 33445667778899866655 9999999999999999999999999999999999999999887653 3 3578889
Q ss_pred HHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH-----------HHHH-----hCCCchh---h--------
Q 014286 145 LLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE-----------FEKL-----LGGSHVK---S-------- 197 (427)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~-----~~~~~~~---~-------- 197 (427)
++.|+++|++.+...+....++.+. ..+++...+... .... ....... .
T Consensus 109 ~~~~~i~G~g~~~~~~~~~~~~~~~----~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 184 (402)
T TIGR00897 109 LLFYGIRGLGYPLFAYSFLVWVVYN----TKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLT 184 (402)
T ss_pred HHHHHHHHcchHHHHhHHHHHHHHh----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 9999999999877655544444431 011111111100 0000 0000000 0
Q ss_pred --H-----HHHHhhhhcC-CCCC----cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---
Q 014286 198 --S-----LAELSKLDRG-DDGD----IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG--- 262 (427)
Q Consensus 198 --~-----~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--- 262 (427)
. .++.++.+++ ++.+ ...+++++++|..+...+..++... .......+.|.+.++.|.+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~g~s~~~~~ 260 (402)
T TIGR00897 185 GGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTI----GLFGFAVFLPMFVAELGFSTSEWL 260 (402)
T ss_pred HHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCChhHHH
Confidence 0 0000000000 0001 1123456667666554443333222 233344566777777888766
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhh-hhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQ-WSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
.......++..++.+..|+++||++||+.+. .+.....++...+....... ....+.......+.+.+.+. ..+.
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~G~~~~~-~~~~ 336 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF---GHSFAVALIIAIALGIFLAG-YVPL 336 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc---CCcHHHHHHHHHHHHHHHHH-HHHH
Confidence 3445667888999999999999999887664 23333333322222222110 11122233333334433332 2343
Q ss_pred hhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 014286 342 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 406 (427)
.. ...|..| ++||++.|+.+...++++.++|.+.|.+.+..|+...+++.+++.+++.++..+
T Consensus 337 ~~-~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 337 AA-VFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HH-HHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 33 5667655 689999999999999999999999999999999999999888887777666543
No 45
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.8e-25 Score=192.75 Aligned_cols=343 Identities=15% Similarity=0.137 Sum_probs=238.1
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
+.+..++.....+...+.+++.+.+.+|+|+|.+|. +++.++..+..++..++.|.+.||||.|++..++.++..+-+
T Consensus 16 L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~--~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~ 93 (417)
T COG2223 16 LWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQK--GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPC 93 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHH--HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHH
Confidence 334444444444555677888889999999987777 999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhH---HHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHHhCC----------------C
Q 014286 133 SISATTRNLI---GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKLLGG----------------S 193 (427)
Q Consensus 133 ~~~~~~~~~~---~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 193 (427)
+..+++.+++ ++++++++.|++.+ .+.....+++. ++++++...+..+.. .... .
T Consensus 94 ~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~----~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 94 LGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASF----FFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccc----cCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 9999986555 99999999999755 44455555554 333333333332221 0000 0
Q ss_pred c--hh------------------hHHHHHhhhhcCCCCCc-chhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHH-
Q 014286 194 H--VK------------------SSLAELSKLDRGDDGDI-VKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSS- 251 (427)
Q Consensus 194 ~--~~------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 251 (427)
. .. ...++.++.....++.. ..++.++++++.|.+.+.+...+... ..+..++|
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~F----vgfs~~l~~ 243 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGF----VGFSAYLPM 243 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccchhHHHHHhcCcchHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 0 00 00011111111111112 45677888888888777766665533 33333333
Q ss_pred HHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 014286 252 SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 328 (427)
Q Consensus 252 ~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
++.+++|.+.. .......+.+.+.++++|+++||+|.++++...+..++++..++........ ...+.+..+...+
T Consensus 244 ~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~l 322 (417)
T COG2223 244 YLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG-HGGSFVVFVAVFL 322 (417)
T ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccc-cCcchHHHHHHHH
Confidence 44456777655 4566666777788999999999999999999988888888877766542211 1233344445455
Q ss_pred HHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHh
Q 014286 329 MFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
......+.+...+.. ++..++| ++.|.+.|+...++.+|+..-|...|...+.+| +...|+++..+.+++.++.+..
T Consensus 323 ~l~~~~G~GnGsvfk-~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 323 ALFVFAGLGNGSVFK-MIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHhccCcchhee-echHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666666666 8888887 568999999999999999999999999999999 7888888888888887766554
Q ss_pred ccC
Q 014286 408 VVE 410 (427)
Q Consensus 408 ~~~ 410 (427)
..+
T Consensus 401 y~r 403 (417)
T COG2223 401 YAR 403 (417)
T ss_pred HHh
Confidence 443
No 46
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.94 E-value=3.2e-25 Score=208.57 Aligned_cols=335 Identities=13% Similarity=0.054 Sum_probs=190.0
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
+.......+...++.....+.+|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+.++++++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~ 115 (476)
T PLN00028 38 FHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDI--GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAV 115 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 333334444444455566788999999999876655 899999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH---------------HHH----hCC-
Q 014286 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF---------------EKL----LGG- 192 (427)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------~~~----~~~- 192 (427)
+++++++|++.++++|+++|++.+...+ ...++.| |+.. ++...+.... ..+ ...
T Consensus 116 ~~~~~~~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~---~~~~-~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 116 FCMSLVSSATGFIAVRFFIGFSLATFVS-CQYWMST---MFNG-KIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHhhHH-HHHHHHH---hcCh-hheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999998875433 3333332 1111 1110000000 000 000
Q ss_pred -----Cch---------------h-hHH-HHHh-----hhhcCCCCC----cchhHhhhcccchhHHHHHHHHHHhhhcc
Q 014286 193 -----SHV---------------K-SSL-AELS-----KLDRGDDGD----IVKFEELLYGRHFRVVFIGSTLFALQQLS 241 (427)
Q Consensus 193 -----~~~---------------~-~~~-~~~~-----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (427)
.+. . ... ++.+ +.+++.+.+ ...+++.++++..+...+..+.....
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 267 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGV--- 267 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHH---
Confidence 000 0 000 0000 000000001 11234445555555444333222221
Q ss_pred chhHHHHhHHH-HHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccch----hhhhhHHHHHHHHHHHHHhhcC
Q 014286 242 GINAIFYFSSS-VFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKAL----LQWSFFSMAVSMAIQVAASSSY 313 (427)
Q Consensus 242 ~~~~~~~~~~~-~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~ 313 (427)
......+.|. +.+..|.+.. ....+..++.+++++++|+++||++||+. .........+..+.+.....
T Consensus 268 -~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~-- 344 (476)
T PLN00028 268 -ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR-- 344 (476)
T ss_pred -HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc--
Confidence 1222333443 3455688765 56666778889999999999999986521 11111111111111111110
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHH
Q 014286 314 IPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIF 393 (427)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 393 (427)
..+.+.....+++++.+..... +..+.+..+..| +++|++.|+.+..+++|+.++|.+.+ ..+..+|...|.+.
T Consensus 345 ---~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~ 418 (476)
T PLN00028 345 ---ANSLGAAIVVMILFSIFVQAAC-GATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLM 418 (476)
T ss_pred ---cchHHHHHHHHHHHHHHHHHhh-hhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHH
Confidence 1111222223333333332222 223335666655 78999999998887778877777654 11223588888888
Q ss_pred HHHHHHHHHHHHH
Q 014286 394 GTFCLMAVAFVKR 406 (427)
Q Consensus 394 ~~~~~~~~~~~~~ 406 (427)
+++.+++.++.++
T Consensus 419 ~~~~~i~~~~~~~ 431 (476)
T PLN00028 419 GVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHHHHHh
Confidence 8777777665543
No 47
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=4.4e-24 Score=203.96 Aligned_cols=349 Identities=21% Similarity=0.188 Sum_probs=240.2
Q ss_pred HHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHH
Q 014286 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 136 (427)
+........+....++..+ .+.+.. +.....+..+++++|..+|++++|+++||+|||++++.++++..++.++++
T Consensus 91 ~~~~~~~~~~~~~~s~~~~--~~~~c~--~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a 166 (521)
T KOG0255|consen 91 CLDGWVYDYGSSVYSIVSE--WNLVCD--SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA 166 (521)
T ss_pred ccceeEecCCCCcccccch--hceeeC--cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444444433 234443 444448899999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHhhhccccccceeeccc-------------------------------------------------
Q 014286 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVT------------------------------------------------- 167 (427)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~------------------------------------------------- 167 (427)
+++|++.+++.|+++|++.++....+..++.
T Consensus 167 ~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~ 246 (521)
T KOG0255|consen 167 FAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGL 246 (521)
T ss_pred HhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999877776666654
Q ss_pred ---------CCchhhhhcCChHHHHHHHHHHhCCC---chh-hHHHHH---hhhhcCCCCCcchhHhhhcccchhHHHHH
Q 014286 168 ---------ESPHWLYKKGRTAEAEAEFEKLLGGS---HVK-SSLAEL---SKLDRGDDGDIVKFEELLYGRHFRVVFIG 231 (427)
Q Consensus 168 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (427)
|+|||+..+++.+++...+......+ ... ...... ++......+++..+.++++.++.+...+.
T Consensus 247 ~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 326 (521)
T KOG0255|consen 247 FLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLY 326 (521)
T ss_pred HHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHH
Confidence 89999999999988888877765432 111 111111 11111112233457788887754433333
Q ss_pred HHHHHhhhccchhHHHHhHHHHHHhcCCChhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhh
Q 014286 232 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 311 (427)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
..+... ......+-........|.+........+.....+....+...|+.|||.....+..+..++.+...+...
T Consensus 327 ~~~~~~----~~~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~ 402 (521)
T KOG0255|consen 327 LLFIWF----VFSLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPD 402 (521)
T ss_pred HHHHHH----HHhHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 322221 1222222334444556777777777777778888888899999999999999999999999888887664
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Q 014286 312 SYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYS 391 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 391 (427)
.. .. +.......+...+.+.++... ..+..|.+|+..|..+.+.......++++++|.+...... ......+.
T Consensus 403 ~~----~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~ 475 (521)
T KOG0255|consen 403 DL----GG-WLHWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLI 475 (521)
T ss_pred cc----hh-HHHHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHH
Confidence 32 10 122223333333333344444 5599999999999999999999999999999988765444 33333444
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCHHHHH
Q 014286 392 IFGTFCLMAVAFVKRNVVETKGKSLQEIE 420 (427)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (427)
+++....+..++...+.||++++.+.+..
T Consensus 476 ~~~~~~~l~~~~~~~~lpet~~~~l~~t~ 504 (521)
T KOG0255|consen 476 LFGWLALLLGLLSLLLLPETKGKPLPGTL 504 (521)
T ss_pred HHHHHHHHHHHHHHhcCcccCCCCCchhH
Confidence 45666677777777889999988765543
No 48
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=1.9e-24 Score=199.88 Aligned_cols=343 Identities=14% Similarity=0.110 Sum_probs=213.8
Q ss_pred hhhhcccccccc-chhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccch-hHHHHHhhHHHHHHHHHHHh
Q 014286 60 SFLFGYHLGVVN-EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGASISAT 137 (427)
Q Consensus 60 ~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~ 137 (427)
.+......+... +..+.+.+++|++.++. |++.+++.++..++++++|.++||+|| |+++.++.++.++++.++.+
T Consensus 11 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~i--Gl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 11 SFLQWFIWGSWLVTLGSYMSKTLHFSGAEI--GWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344444444443 44456677889876655 999999999999999999999999965 77889889999899999999
Q ss_pred hhhhHHHHHHHHHHhhhccccccceeecc----c----CCchhhhhcCChHHHHHH----HHHHhCCCc--hh-------
Q 014286 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYV----T----ESPHWLYKKGRTAEAEAE----FEKLLGGSH--VK------- 196 (427)
Q Consensus 138 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i----~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~------- 196 (427)
.++++.+++.|++.|++.+...+...++. . |..+.+...+........ +........ ..
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l~~~~~~~~f~~~~~~ 168 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLLDIELSNIQLYITAGS 168 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 99999999999999998766655443331 1 111111000000000000 000000000 00
Q ss_pred ----hHH-HHHhhhhcCCC---CC-----cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCCh--
Q 014286 197 ----SSL-AELSKLDRGDD---GD-----IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS-- 261 (427)
Q Consensus 197 ----~~~-~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-- 261 (427)
... ...++.++.++ .+ +.+.++++|++.++..++..++.... ......+.+.+.++.|.++
T Consensus 169 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~ 244 (418)
T TIGR00889 169 SALLGVFALTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAP----LQITNIFGNGFLHEFGRNPEF 244 (418)
T ss_pred HHHHHHHHhcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhH----HHHHHHhHHHHHHHhcccccc
Confidence 000 00011100000 00 01234567777766555554443321 1222233444445545332
Q ss_pred ---------hHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 014286 262 ---------GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVL 332 (427)
Q Consensus 262 ---------~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (427)
+.......+..+++.+..++++||+|+|+.+..+.++.+++..++..... .....+..++..++.+.
T Consensus 245 ~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~----~~~~~~~l~l~~~l~g~ 320 (418)
T TIGR00889 245 ADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDP----EYFGYALLFLSMIVYGC 320 (418)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc----chhhHHHHHHHHHHHHH
Confidence 25556666778888999999999999999999998888777655544211 01111223333444444
Q ss_pred HHhhcccchhhhhccCcCCccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHh------ccchhHHHHHHHHHHHHHHHH
Q 014286 333 TFALGAGPVPSLLLPEIFPSRIRAKAMAVCM-SVHWVINFFVGLLFLRLLEQL------GPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~------g~~~~~~~~~~~~~~~~~~~~ 405 (427)
+.+.. .+....++.|.+|++.|+++.|+.+ ....+|.+++|.+.|.+.|+. ||+..|.+.+++.++..++.+
T Consensus 321 ~~~~~-~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 321 AFDFF-NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 44432 3444458899999999999999997 567899999999999999985 578888888888888888777
Q ss_pred HhccCCCC
Q 014286 406 RNVVETKG 413 (427)
Q Consensus 406 ~~~~~~~~ 413 (427)
++.+|+++
T Consensus 400 ~~~~~~~~ 407 (418)
T TIGR00889 400 IFFKYSHN 407 (418)
T ss_pred HHhCCccc
Confidence 77776654
No 49
>PRK11043 putative transporter; Provisional
Probab=99.93 E-value=5.9e-24 Score=196.79 Aligned_cols=314 Identities=20% Similarity=0.186 Sum_probs=196.0
Q ss_pred hhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhh
Q 014286 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (427)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 139 (427)
.....+....+.|.+|.+.+++|.+.++. |++.+++.++..++++++|+++||+|||+++..+.++.+++.+++++++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAV--SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 33344566778889999999999866655 9999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH----------HH-----HhCCCchhh-------
Q 014286 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF----------EK-----LLGGSHVKS------- 197 (427)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~-----~~~~~~~~~------- 197 (427)
+++.+++.|+++|++.+...+....++.|. ..+++........ .. +......+.
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~ 168 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDR----YPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFA 168 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 999999999999999877666555555541 1111111111100 00 000000000
Q ss_pred -------HHHHHhhhhc--CCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHH
Q 014286 198 -------SLAELSKLDR--GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LAN 265 (427)
Q Consensus 198 -------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~ 265 (427)
......+.++ ++++++.++++.++++..+...+....... .......+.|.+.++.|.+.. ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~g~s~~~~g~~~ 244 (401)
T PRK11043 169 ITLLLILPTLRLKPSKKARKQSQDALTFKQLLKSKTYLGNVLIFAACSA----AFFAWLTGSPFILEQMGYSPADIGLSY 244 (401)
T ss_pred HHHHHHHHHHHcCCCCCccccchHHHHHHHHHcChhHHHHHHHHHHHHH----HHHHHHHHhHHHHHHcCCCHHHHHHHH
Confidence 0000111111 111223356677777766544333322222 122233445666677788766 334
Q ss_pred HHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhh
Q 014286 266 VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLL 345 (427)
Q Consensus 266 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (427)
....++..++.++.+++.||+++|+.........+++.+.+....... ....+.......+.+.+.+. ..+.....
T Consensus 245 ~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 320 (401)
T PRK11043 245 VPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS---HPSLVPLLIPFCVMAAANGA-IYPIVVAQ 320 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 455667788889999999999998876665555554444333222111 11122222233333333332 33444445
Q ss_pred ccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Q 014286 346 LPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQL 388 (427)
Q Consensus 346 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 388 (427)
..|..| +++|++.|+.+.....++..++.+.|.+.+......
T Consensus 321 ~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 321 ALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 566666 679999999999999999999999999877544433
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.93 E-value=6.8e-25 Score=208.52 Aligned_cols=318 Identities=18% Similarity=0.195 Sum_probs=213.3
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
.+..++++.+...++....++.+|.+.+++|.+.++. +++.+.+.++..++.++.|+++||+|||++++.+.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQV--QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh--hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4566777888888999999999999999999876666 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHH------H-----------------
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFE------K----------------- 188 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~----------------- 188 (427)
++++++++|++.++++|+++|++.+...+....++.|.. .++++..+..... .
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~----~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~ 156 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIY----PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWR 156 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCce
Confidence 999999999999999999999999988887777776421 1111111100000 0
Q ss_pred ------------------HhCCCchhhHHHH-------------------Hhhhhc------------------------
Q 014286 189 ------------------LLGGSHVKSSLAE-------------------LSKLDR------------------------ 207 (427)
Q Consensus 189 ------------------~~~~~~~~~~~~~-------------------~~~~~~------------------------ 207 (427)
.......+...++ ..+.++
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (485)
T TIGR00711 157 WIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFV 236 (485)
T ss_pred ehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 0000000000000 000000
Q ss_pred ---CCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHh
Q 014286 208 ---GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAM 280 (427)
Q Consensus 208 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g 280 (427)
.+++++....+.++++.++...+..++.... .....++.|.+. +..|.++. ....+..++.+++.++.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g 312 (485)
T TIGR00711 237 VWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLG----LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAG 312 (485)
T ss_pred HHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001112355666655544444333332 222334455444 44677765 566667788889999999
Q ss_pred hhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHH
Q 014286 281 VLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMA 360 (427)
Q Consensus 281 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g 360 (427)
++.||++||+.+..+..+.+++..++..... .+...+.......+.+.+.+....+... ...+..|+++++++.|
T Consensus 313 ~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~g~~~~~~~~~~-~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 313 RMGDKIDPRKLVTIGLILYAVGFYWRAFTFT----PDTPFLAIALPQFIRGFGMGCFFMPLTT-IALSGLPPHKIARGSS 387 (485)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCHHHHhHHHH
Confidence 9999999999988887777766665542111 1222233333444455555444445444 5567779999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 014286 361 VCMSVHWVINFFVGLLFLRLLEQL 384 (427)
Q Consensus 361 ~~~~~~~~g~~~~~~~~g~l~~~~ 384 (427)
+.+..+.+|+.+++.+.+.+.++.
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998753
No 51
>TIGR00895 2A0115 benzoate transport.
Probab=99.93 E-value=7e-24 Score=196.39 Aligned_cols=320 Identities=19% Similarity=0.217 Sum_probs=200.9
Q ss_pred HHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
.+..+...++..+..+++.....+..|.+.+++|.+..+. |++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL--GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH--HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 3445566666677777777778888999999999865555 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCch---------------------------hhhhcCChHH
Q 014286 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPH---------------------------WLYKKGRTAE 181 (427)
Q Consensus 129 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---------------------------~~~~~~~~~~ 181 (427)
+++.+++.++++++.+++.|++.|++.+...+....++.|... ++.....+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 172 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRS 172 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccccee
Confidence 9999999999999999999999999999888888777775210 0000000000
Q ss_pred H------HHH----HHHHhCCCchh---hH-HHH-------Hhhh--------hcCCCC----CcchhHhhhcccchhHH
Q 014286 182 A------EAE----FEKLLGGSHVK---SS-LAE-------LSKL--------DRGDDG----DIVKFEELLYGRHFRVV 228 (427)
Q Consensus 182 ~------~~~----~~~~~~~~~~~---~~-~~~-------~~~~--------~~~~~~----~~~~~~~~~~~~~~~~~ 228 (427)
. ... +.......... .. .++ ..+. .++++. .+...+..++++..+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARIT 252 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHH
Confidence 0 000 00000000000 00 000 0000 000000 01112223333333322
Q ss_pred HHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHH
Q 014286 229 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 305 (427)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 305 (427)
........+ ..........+.|++.++.+.+.. .......++.+++.++.+++.||+++|+... ...+..+...+
T Consensus 253 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~ 330 (398)
T TIGR00895 253 VLLWLLYFM-LLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGAVFAVL 330 (398)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHHH
Confidence 222222222 222344445566777777887765 4566677888999999999999999984443 33333333333
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 306 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRL 380 (427)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 380 (427)
+..... ..+......++.+.+.+.. .+...++..|.+|+++|+++.|+.+.+.++|..++|.+.|.+
T Consensus 331 ~~~~~~-------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 331 VGSTLF-------SPTLLLLLGAIAGFFVNGG-QSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHhh-------CHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 222111 1122333344444444333 445566899999999999999999999999999999999875
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.93 E-value=1.8e-24 Score=199.48 Aligned_cols=312 Identities=20% Similarity=0.176 Sum_probs=198.7
Q ss_pred HHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHH
Q 014286 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (427)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 135 (427)
+.+..+....+.....|.+|.+.+++|.+.++. |++.+.+.++..++++++|+++||+|||+++..+.++.+++.+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAADLSTPASIV--QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 333345556677788899999999999876665 999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHH------hC----------CCchh---
Q 014286 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKL------LG----------GSHVK--- 196 (427)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------~~----------~~~~~--- 196 (427)
+++++++.+++.|+++|++.+...+....++.|. ..+++........... .+ .....
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 163 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDI----YPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFA 163 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHh----cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 9999999999999999999999888888777762 1111111111110000 00 00000
Q ss_pred -----------hHHHHHhhhhcCCC-----CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHH-HHhcCC
Q 014286 197 -----------SSLAELSKLDRGDD-----GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV-FKSAGL 259 (427)
Q Consensus 197 -----------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~ 259 (427)
......++.+++++ +....+++.++++..+...+....... .......+.|.+ .+..|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 239 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETLPYEARIQISTYFETFLLLLKSKMFWGYALIYGASFG----GFFAFFSGAPFVYIDIMGV 239 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHH----HHHHHHHcChHHHHHHcCC
Confidence 00000011111111 111234556667666654443333222 122222333433 346777
Q ss_pred Chh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhh
Q 014286 260 SSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFAL 336 (427)
Q Consensus 260 ~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (427)
++. .......++.+++.++.+++.||+++|+.+..+..+..++..++....... ............+.+.+.+.
T Consensus 240 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~ 316 (385)
T TIGR00710 240 SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG---LGSWAMIIGPMMFVGIGNSM 316 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHH
Confidence 765 455667788889999999999999999988888777776666555432211 11112222223333333333
Q ss_pred cccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 337 GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 382 (427)
Q Consensus 337 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 382 (427)
. .+.......|..| ++++++.++.+...+.++.+.+.+.+.+.+
T Consensus 317 ~-~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 317 I-SSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred H-HHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2 3344446677777 679999999999988777777777774433
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.93 E-value=2.2e-24 Score=201.45 Aligned_cols=348 Identities=11% Similarity=0.049 Sum_probs=207.7
Q ss_pred HHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
.+..+....+.+...+.++..+....|.+++ +|++.++. |++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGEL--GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHh--HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3445556666666676777767777787775 58766655 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH---------------H
Q 014286 129 IIGASISATT----RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK---------------L 189 (427)
Q Consensus 129 ~~~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~ 189 (427)
+++.+++++. ++++.+.+.|++.|++.|...+.....+.|. ..+++...+...... .
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~----~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHW----WSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHh----cCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 9999888764 4677888999999999988777665554431 111111111000000 0
Q ss_pred h----C-------------------CCchhhHHHHH-----hhhhc-------CCCCCcchh-----HhhhcccchhHHH
Q 014286 190 L----G-------------------GSHVKSSLAEL-----SKLDR-------GDDGDIVKF-----EELLYGRHFRVVF 229 (427)
Q Consensus 190 ~----~-------------------~~~~~~~~~~~-----~~~~~-------~~~~~~~~~-----~~~~~~~~~~~~~ 229 (427)
. + ....++..++. ++.++ ++++.+.+. +..++++..+...
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIA 257 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHH
Confidence 0 0 00000000000 00000 000000111 1245566555544
Q ss_pred HHHHHHHhhhccchhHHHHhHHHHHHh-cCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHH
Q 014286 230 IGSTLFALQQLSGINAIFYFSSSVFKS-AGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 305 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 305 (427)
+...+... .......+.|.+.++ .|.+.. +...+..+..+++.+++|+++||+++++....+.....+..+.
T Consensus 258 ~~~~~~~~----~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 333 (438)
T TIGR00712 258 IANVFVYL----LRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIA 333 (438)
T ss_pred HHHHHHHH----HHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHH
Confidence 43333222 222333455555544 576654 5666777888999999999999996543222232222221111
Q ss_pred -HHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 014286 306 -QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVIN-FFVGLLFLRLLEQ 383 (427)
Q Consensus 306 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~g~l~~~ 383 (427)
...... ...+.+......+..+.+. .+..........|.+|++.||++.|+.+...++++ +++|.+.|.+.|+
T Consensus 334 ~~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~ 408 (438)
T TIGR00712 334 VIVYWMN----PAGNPLVDMICMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 408 (438)
T ss_pred HHHHHhc----CCCchHHHHHHHHHHHHHH-ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHh
Confidence 111111 1111122222222222211 11112222356788999999999999999988875 6899999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhccCCC
Q 014286 384 LGPQLLYSIFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 384 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
.||...+.+.+++.+++.+......+|.|
T Consensus 409 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 409 FGWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999998888888777777766666544
No 54
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.93 E-value=6.9e-25 Score=200.68 Aligned_cols=312 Identities=13% Similarity=0.086 Sum_probs=206.3
Q ss_pred HHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHH
Q 014286 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 136 (427)
..+.++..+......+.+|.+..+++.+.. +.|++.+++.++..++++++|+++||+|||++++.+.++..++.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSAS--VLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHH--HHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 344555556667777888999999886544 449999999999999999999999999999999999999999999988
Q ss_pred hhh-----hhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH------HHHhCC----------Cc-
Q 014286 137 TTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF------EKLLGG----------SH- 194 (427)
Q Consensus 137 ~~~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~~----------~~- 194 (427)
+++ |++.+++.|+++|++.+...+...+++.|. ..++++....... ....+. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~ 158 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDL----VPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIK 158 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 888 999999999999999999888888887762 1111111111100 000000 00
Q ss_pred --------------hhhHHHHHhhhhc-CCCC--------CcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHH
Q 014286 195 --------------VKSSLAELSKLDR-GDDG--------DIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSS 251 (427)
Q Consensus 195 --------------~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
........++.++ ++++ ....+++.++++..+.......+...... .....+.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 235 (365)
T TIGR00900 159 WAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFA---PAIVALFP 235 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHH---HHHHHHhH
Confidence 0000000000000 0000 01223445666666655444443333221 12223445
Q ss_pred HHHHh-cCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH
Q 014286 252 SVFKS-AGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 327 (427)
Q Consensus 252 ~~~~~-~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
.+.++ .+.+.. .......++.+++.++.+++.||.+||+.+..+..+.+++...+..... +.+...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 308 (365)
T TIGR00900 236 YVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP-------NFPLFLVLW 308 (365)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch-------hHHHHHHHH
Confidence 55443 566654 5666677888899999999999999999888776666665555443321 123344444
Q ss_pred HHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 014286 328 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 385 (427)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 385 (427)
++.+.+.+. ..+...++..|..|+++|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 309 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 309 FAIGVGYGP-INVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 444544443 345555688999999999999999999999999999999999998764
No 55
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.93 E-value=8.2e-25 Score=191.38 Aligned_cols=333 Identities=16% Similarity=0.129 Sum_probs=211.0
Q ss_pred CchhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHh
Q 014286 45 SWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLC 124 (427)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~ 124 (427)
.++.....++++++...++.+|+..+..+.+++++.+|++++.. |++.+.+.+.+.+++|++|+++|||+||+++.+|
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~--Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG 104 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSEL--GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVG 104 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhc--cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeH
Confidence 44555567889999999999999999999999999999988877 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHHhC-------------
Q 014286 125 ALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKLLG------------- 191 (427)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------------- 191 (427)
..+|.++.++++++..||+++++|.+.|+|.+...++++.+++|+ +...++......+.....
T Consensus 105 ~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~----f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 105 IFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADS----FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhc----CcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence 999999999999999999999999999999999999999999973 222222222222111100
Q ss_pred -------------------------CCchhhHHHHHhhhhcCCC----CC---cchhHhhhcccchhHHHHHHHHHHhhh
Q 014286 192 -------------------------GSHVKSSLAELSKLDRGDD----GD---IVKFEELLYGRHFRVVFIGSTLFALQQ 239 (427)
Q Consensus 192 -------------------------~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (427)
....+++.+...++.+.+. .. ..+.+.+.+++.+....+.+....+..
T Consensus 181 a~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~ 260 (493)
T KOG1330|consen 181 ASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI 260 (493)
T ss_pred ccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhc
Confidence 0011111111111111111 11 122333444455544444444444433
Q ss_pred ccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCc----cchhhhhhHHHHHH----HHHHHH
Q 014286 240 LSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGR----KALLQWSFFSMAVS----MAIQVA 308 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~----~~~~~~~~~~~~~~----~~~~~~ 308 (427)
.....+.+.+.++..+..+.+.. ....+...++.+|.+++|.++||+.| ........+..+.+ ...+..
T Consensus 261 Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~ 340 (493)
T KOG1330|consen 261 GSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL 340 (493)
T ss_pred cccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH
Confidence 33333334444444444444433 55666777888999999999999532 12222222222211 111111
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHh-cc
Q 014286 309 ASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV-INFFVGLLFLRLLEQL-GP 386 (427)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~-g~ 386 (427)
.... .....+.. ..+++++............-+..|++|++.|.++.++...+..+ |.+-+|++.|.+.|+. |+
T Consensus 341 ~~~~---~~~s~~~~-~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~ 416 (493)
T KOG1330|consen 341 FPAF---TSSSMIFG-LILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGY 416 (493)
T ss_pred HHhh---hhHHHHHH-HHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCC
Confidence 1111 11222222 22333333333333333333888999999999999998877665 5566666999999874 44
Q ss_pred c
Q 014286 387 Q 387 (427)
Q Consensus 387 ~ 387 (427)
.
T Consensus 417 ~ 417 (493)
T KOG1330|consen 417 K 417 (493)
T ss_pred C
Confidence 4
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.93 E-value=9.2e-24 Score=193.98 Aligned_cols=326 Identities=15% Similarity=0.109 Sum_probs=202.8
Q ss_pred hhhhhccccccccchhhh-hhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHH-HhhHHHHHHHHHHH
Q 014286 59 SSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ-LCALPMIIGASISA 136 (427)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~ 136 (427)
.++..++..+...|.+|. +++++|.+..+. |++.+.+.++..+.++++|.++||+||||.++ .+.++..++.++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMI--GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 355566667777888886 568899876655 99999999999999999999999999988765 45666677888899
Q ss_pred hhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHH--HH------HHHHHhCCC---------chhh--
Q 014286 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEA--EA------EFEKLLGGS---------HVKS-- 197 (427)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~--~~------~~~~~~~~~---------~~~~-- 197 (427)
+++|++.+++.|+++|.+.+...+....+..|. ..+++.... .. .+....+.. ..+.
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f 158 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREH----ADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMF 158 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHH----hhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHH
Confidence 999999999999999888777666655555441 111111100 00 011111100 0000
Q ss_pred -------------HHHHHhhhhc--CCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHH-HHHHhcCCCh
Q 014286 198 -------------SLAELSKLDR--GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSS-SVFKSAGLSS 261 (427)
Q Consensus 198 -------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~ 261 (427)
.....++.++ +++..+.+.++.++++.++......++.... ......+.+ ++.++.|.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~ 234 (375)
T TIGR00899 159 LTAALAFVLCGVLVWLFLPSYPRGAPGALTRLEVRGLLASRDTRLLFVACTLMWGC----NILYIINMPLLIIHELGLPD 234 (375)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCcccccCcchhhhhhcCcchHHHHHHHHHHHHH----HHHHHhhhHHHHHHHcCCCH
Confidence 0000111111 1111122344556666665544433332221 111222233 3445667776
Q ss_pred hH---HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcc
Q 014286 262 GL---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGA 338 (427)
Q Consensus 262 ~~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (427)
.. ......+..+++.++.|++.||++||+.+..+.....+....+....+ .+.......+.+.+.+..
T Consensus 235 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~g~~- 305 (375)
T TIGR00899 235 KLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS--------LWALLMLQLLNAIFIGIL- 305 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH-
Confidence 63 333344456677889999999999999887766655444433332211 122233333333333322
Q ss_pred cchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 014286 339 GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
.+....+..|..|+ +++++.++.+...++|..++|.+.|.+.+..|++..+.+.+++.+++.++.
T Consensus 306 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 306 AGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 34455577888775 567999999999999999999999999999999999988888777766554
No 57
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.93 E-value=1.9e-24 Score=198.78 Aligned_cols=322 Identities=14% Similarity=0.077 Sum_probs=197.7
Q ss_pred hhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 014286 59 SSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (427)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 138 (427)
+++...++...+++..|.+.+++|++.++. |++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDL--GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHH--HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 345666778888889999999999876666 999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhccccccceeecccCCch----------------------------hhhhcCChHHHHHHHH---
Q 014286 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPH----------------------------WLYKKGRTAEAEAEFE--- 187 (427)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~----------------------------~~~~~~~~~~~~~~~~--- 187 (427)
++++.+++.|++.|++.+...+....++.|... .+.....+........
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 999999999999999999888888877764210 0000001100000000
Q ss_pred ---HHhCCCchhhHHHH-----Hhh--hhc------CC----CCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHH
Q 014286 188 ---KLLGGSHVKSSLAE-----LSK--LDR------GD----DGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIF 247 (427)
Q Consensus 188 ---~~~~~~~~~~~~~~-----~~~--~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
........++..++ .++ .++ ++ +..+...++.++++..+...+...+.... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 236 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVV----RTGIL 236 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHH----HHHHH
Confidence 00000000000000 000 000 00 00111234456666655544444333322 22333
Q ss_pred HhHHHH-HHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 014286 248 YFSSSV-FKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 323 (427)
Q Consensus 248 ~~~~~~-~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (427)
.+.+.+ .+..|.+.. .......++.+++.++.+++.||..+++...............+...... .....+..
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 313 (379)
T TIGR00881 237 DWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLN---PAANPLMD 313 (379)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcC---cchhHHHH
Confidence 344444 345677655 56666778888999999999998643322222221111111111111100 01111222
Q ss_pred HHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 014286 324 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLY 390 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 390 (427)
.......+. ...+..+....+..|.+|+++|+++.|+.+...++|+.++|.+.|.+.|+.||+..|
T Consensus 314 ~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 314 LICLFALGF-LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHH-HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 222222222 222333444557889999999999999999999999999999999999999987653
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=4e-24 Score=201.63 Aligned_cols=346 Identities=11% Similarity=0.052 Sum_probs=211.7
Q ss_pred hhHHHHHHHHHHhhhhhccccccccchhhhhhh----------------------ccCCCCchhHHHHHHHHHHHHHHHH
Q 014286 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISL----------------------DLGFNGNTLAEGLVVSMCLGGAFIG 104 (427)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~~~~~~~~g~~~s~~~l~~~~~ 104 (427)
+.++.++.+++++....+.|+..++...+.+.+ |++++..+. |++.+.+.+++.++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQ--GLILSSHFYGQIII 92 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHh--hHHHHHHHHHHHHH
Confidence 344567777788888888999888888888876 677655544 99999999999999
Q ss_pred HHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhh--hhhHHHHHHHHHHhhhccccccceeecccCCch-----------
Q 014286 105 STLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPH----------- 171 (427)
Q Consensus 105 ~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~----------- 171 (427)
+++.|+++||+|||+++..+.++++++++++.++ .+++.+++.|+++|++.+...+....+++|..+
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999999887654 568899999999999999999988888775210
Q ss_pred ----------------hhhhc-CChHHHH------HH---HHH-HhC-CCc-h-----hhHHHHHhhhhcC---CCCCcc
Q 014286 172 ----------------WLYKK-GRTAEAE------AE---FEK-LLG-GSH-V-----KSSLAELSKLDRG---DDGDIV 214 (427)
Q Consensus 172 ----------------~~~~~-~~~~~~~------~~---~~~-~~~-~~~-~-----~~~~~~~~~~~~~---~~~~~~ 214 (427)
++... ..+.... .. +.. ... ... . +.+.+..++..++ +.+.+.
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSL 252 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCC
Confidence 00000 0110000 00 000 000 000 0 0000000000000 111223
Q ss_pred hhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccc
Q 014286 215 KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKA 290 (427)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~ 290 (427)
+++++++++..+...+..+.... .......|.|.++ +..|.+.. ....+..++.+++.++.|+++||+++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFW----LYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 46777777766655544433332 3444455666554 44677654 5566677888899999999999976443
Q ss_pred hhh------hhhHHHH--HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHH
Q 014286 291 LLQ------WSFFSMA--VSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVC 362 (427)
Q Consensus 291 ~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 362 (427)
... ....+.. .+...+..... ....+..+..+.+.+.+.+ ...+.......|..| +.+|.+.|+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~ 401 (465)
T TIGR00894 329 TLSLTAARKIFNGIGGLGPGIFAYALPYL-----SAAFYLTIIILTLANAVSS-GPLAGVLINSLDLAP-RFLGFIKGIT 401 (465)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCchHHHHHHHHHHHHHhh-hhhhhhhhchhhcCh-hHHHHHHHHH
Confidence 211 1111111 11111111110 1111222222222222222 222333334557666 5899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHHHH
Q 014286 363 MSVHWVINFFVGLLFLRLLEQL---GPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 363 ~~~~~~g~~~~~~~~g~l~~~~---g~~~~~~~~~~~~~~~~~~~~ 405 (427)
+..+.+++.++|.+.|.+.+.. +|...|.+.+++.+++.++..
T Consensus 402 ~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 402 GLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 9999999999999999987653 377788888777777665554
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.92 E-value=9.9e-24 Score=195.06 Aligned_cols=341 Identities=15% Similarity=0.148 Sum_probs=199.8
Q ss_pred hhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhH
Q 014286 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (427)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~ 126 (427)
.........+.+..+...++...+.|.+|.+.++++.+.++. ++..+++.+++.++++++|+++||+|||++++.+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 89 (413)
T PRK15403 12 AATLFFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLA--PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGAL 89 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHH
Confidence 333334455566667777888999999999999999866665 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH----------HHHhCC----
Q 014286 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF----------EKLLGG---- 192 (427)
Q Consensus 127 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~---- 192 (427)
+++++++++++++|++.++++|+++|++.+...+....++.|. ..+++..+..... ....+.
T Consensus 90 ~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 90 IFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEA----FGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999876555555555441 1111111111100 000000
Q ss_pred --Cc--------------hhhHHHHHhhhhcCCCC--C----cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhH
Q 014286 193 --SH--------------VKSSLAELSKLDRGDDG--D----IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS 250 (427)
Q Consensus 193 --~~--------------~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
.+ ........++.++++++ . ...++++++++.++...+...+.... ......+.
T Consensus 166 ~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~----~~~~~~~~ 241 (413)
T PRK15403 166 FVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIP----MMSWVAVS 241 (413)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHH----HHHHHHhC
Confidence 00 00000001111111111 1 12445667777666554444333322 22233344
Q ss_pred HHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 014286 251 SSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 326 (427)
Q Consensus 251 ~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
|.+. +..|.+.. +.......+.+++..+.+++.++..+++.......+..++..++....... ....+.....
T Consensus 242 P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~---~~~~~~~~~~ 318 (413)
T PRK15403 242 PVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW---PHVWLWSVLG 318 (413)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc---cccHHHHHHH
Confidence 5444 44577766 344445666677777777765544443333322333333333332221100 1111223344
Q ss_pred HHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 014286 327 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAF 403 (427)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 403 (427)
..+++.+.+....+... ..-+. ....+|++.|+.+.....+..+++...+++.++ +...+|...++++.+....
T Consensus 319 ~~l~~~G~~~~~p~~~~-~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 392 (413)
T PRK15403 319 TSLYAFGIGLIFPTLFR-FTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVVF 392 (413)
T ss_pred HHHHHHHHHHHhHHHHH-HHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHHH
Confidence 44455554443333322 22111 123479999999999999999999999988775 6666666666555544333
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.92 E-value=1.7e-23 Score=192.34 Aligned_cols=328 Identities=16% Similarity=0.102 Sum_probs=201.7
Q ss_pred HHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHH
Q 014286 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 136 (427)
+++.++..+.........+.+.+|++.+..+ .+++.+.+.+++.++++++|+++||+|||++++.+.+++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~--~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKELHYPDWS--QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH--HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 4444554454444455566677888865444 49999999999999999999999999999999999999999999888
Q ss_pred hhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHHh------CC----Cc----hh------
Q 014286 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKLL------GG----SH----VK------ 196 (427)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~----~~------ 196 (427)
++++. ++.|+++|++.+...|...++++| +..+++..++........ +. .. ..
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~----~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~ 159 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYGILTE----LLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVC 159 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHH----HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87764 789999999999999999988886 222233322222111100 00 00 00
Q ss_pred h------HH--HHHhhhhcC-C--CCC--------cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhH-HHHHHh
Q 014286 197 S------SL--AELSKLDRG-D--DGD--------IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS-SSVFKS 256 (427)
Q Consensus 197 ~------~~--~~~~~~~~~-~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 256 (427)
. .. ...++.+.+ + +.+ ...++.+++++..+.......+..... ....+.. ++..+.
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 235 (393)
T PRK11195 160 ALIYLLAALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAG----ATLRFLVLAWAPVA 235 (393)
T ss_pred HHHHHHHHHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 0 00 000110000 0 000 011344566666554433332222211 1112222 223334
Q ss_pred cCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 014286 257 AGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLT 333 (427)
Q Consensus 257 ~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (427)
.|.++. ......+++.++++++.+++.||.++++.+..+.. .++....+.... +.+.......+.+.+
T Consensus 236 lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--------~~~~~~~~~~~~G~~ 306 (393)
T PRK11195 236 LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--------SLLPAYPLLILIGAL 306 (393)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--------HHHHHHHHHHHHHHh
Confidence 566554 56677778889999999999999998877766643 333322222211 123333344445555
Q ss_pred HhhcccchhhhhccCcCCccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhc
Q 014286 334 FALGAGPVPSLLLPEIFPSRI-RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNV 408 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~p~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 408 (427)
.+....+... ...+..|++. +|++.++.+...+++..++..+.+.+ +..|.+..+.+.+...+++..+.+.++
T Consensus 307 ~g~~~~~~~~-~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 307 GGFFVVPMNA-LLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred hhhhhhhHHH-HHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444 6677666554 79999999999999999999998855 678888777776666666655554444
No 61
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.92 E-value=3e-23 Score=191.47 Aligned_cols=316 Identities=20% Similarity=0.198 Sum_probs=191.4
Q ss_pred HhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHh
Q 014286 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (427)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 137 (427)
...+..........+.+|.+.+++|.+.++. ++..+.+.++..+++++.|+++||+|||++++.+.++..++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQL--HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 3334444455556678999999999866555 99999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHH----------H----H-h-CCCchh-----
Q 014286 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFE----------K----L-L-GGSHVK----- 196 (427)
Q Consensus 138 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----------~----~-~-~~~~~~----- 196 (427)
+++++.+++.|+++|++.+...+....++.|. ..++++........ . . . ...+..
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~----~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDT----LDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 99999999999999999988887777777652 11111111111000 0 0 0 000000
Q ss_pred -------h--HHHHHhhhhcC-CC---CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHH-HHHHhcCCChh
Q 014286 197 -------S--SLAELSKLDRG-DD---GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSS-SVFKSAGLSSG 262 (427)
Q Consensus 197 -------~--~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 262 (427)
. .....++.+++ ++ ......++.++++.++...+...+.... ......+.+ +..++.|.+..
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~ 239 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRPARAPAASSKPRENSESLLNRFFLSRLVITTLSVTV----ILTFVNTSPVLLMEQMGFSRG 239 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccCCccchHHHHHHHHhCHHHHHHHHHHHHHHHH----HHHHHHhCHHHHHHHcCCCHH
Confidence 0 00000111111 01 1112334556665544333322222211 111222233 33456677765
Q ss_pred ---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhccc
Q 014286 263 ---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG 339 (427)
Q Consensus 263 ---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (427)
......+++.+++.++.+++.||+|||+.+..+..+..++.+.+...... +.......+...+++.+..
T Consensus 240 ~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~g~~~~~~ 311 (392)
T PRK10473 240 EYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSH--------AVSLFGITLICAGFSVGFG 311 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHhH
Confidence 45566777888999999999999999999888887777776665554321 1222223333333333322
Q ss_pred chhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Q 014286 340 PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFC 397 (427)
Q Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 397 (427)
.. ...+..|.++|+ |.......++..+++.+.+.+.+..|+.....+.+.+.
T Consensus 312 ~~---~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 312 VA---MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HH---HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 21 333444544443 44455566778888888888888888765454444433
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=3.3e-23 Score=188.53 Aligned_cols=328 Identities=25% Similarity=0.312 Sum_probs=227.9
Q ss_pred HHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHH
Q 014286 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (427)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 134 (427)
.+.+..+...++.....+..|.+.+++|.+.++. +++.+.+.++..++++++|+++||+|||+.+..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQA--GLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 3445566677778888899999999998765555 99999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHHhCCCchhhH--HHHHhhhhcCCCCC
Q 014286 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKLLGGSHVKSS--LAELSKLDRGDDGD 212 (427)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 212 (427)
+.++++++.++++|++.|++.+...+....++.| ...++++................... .....+... .
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~ 152 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAE----WFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG----W 152 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHH----hCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh----H
Confidence 9999999999999999999999998888888887 33333333322221111100000000 000000000 0
Q ss_pred cchhH------------hhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhc-CCChh---HHHHHHHHHHHHHH
Q 014286 213 IVKFE------------ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA-GLSSG---LANVFVGIANLLGS 276 (427)
Q Consensus 213 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~---~~~~~~~~~~~~~~ 276 (427)
+..+. ..+-.+..+... +..+...........+.+.+.++. +.+.. .......++..++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 228 (352)
T cd06174 153 RWLFLILAILGLLLALLLLFLLRLLLLLA----LAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA 228 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000 000001122221 222222223444455555555543 66655 56677788889999
Q ss_pred HhHhhhhcccCccc-hhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccch
Q 014286 277 VVAMVLMDKLGRKA-LLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIR 355 (427)
Q Consensus 277 ~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 355 (427)
++.+++.||++||+ .+..+..+..++...+....+ .+.......+.+.+.+ ...+....+..|..|+++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~ 299 (352)
T cd06174 229 LLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS--------LALLLVALLLLGFGLG-FAFPALLTLASELAPPEAR 299 (352)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc--------HHHHHHHHHHHHHHHh-ccchhHHHHHHhhcCHHHH
Confidence 99999999999999 888888888887776665432 2333444444444444 3456666699999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 356 AKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 356 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
++..|+.+...+++..++|.+.|.+.+..+++..+.+.+++.+++.++.+
T Consensus 300 ~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 300 GTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999999999988888877766543
No 63
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.92 E-value=1.3e-23 Score=194.23 Aligned_cols=324 Identities=17% Similarity=0.160 Sum_probs=192.3
Q ss_pred hhhccccccccchhhhhhhccCCCCchhHHHHHHHH-----HHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHH
Q 014286 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSM-----CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (427)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~-----~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 135 (427)
+.+++++..+++..+.+.+++..+.++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 455677777777888888776542333333444432 334445789999999999999999999999999999999
Q ss_pred HhhhhhH--------HHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH------HHH----H--------
Q 014286 136 ATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE------FEK----L-------- 189 (427)
Q Consensus 136 ~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~----~-------- 189 (427)
+++++++ .++++|+++|++.+...+....++.|. ..++++...... +.. .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~ 158 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEY----APPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYL 158 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhc----CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999875 488999999999999888888887762 111111111000 000 0
Q ss_pred hC------CCc----------------hh---hHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchh
Q 014286 190 LG------GSH----------------VK---SSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGIN 244 (427)
Q Consensus 190 ~~------~~~----------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (427)
.. ..+ .. .+.++.++.++++++.+.+.++.++++..+ .........+... ...
T Consensus 159 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~ 236 (394)
T TIGR00883 159 LGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKKKRGPIRETLTKHRKP-FLLGLGLVIATTT-TFY 236 (394)
T ss_pred cCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhccccccCCHHHHHHhchHH-HHHHHHHHHHHHH-HHH
Confidence 00 000 00 000000011111122234456666655422 2222222222222 233
Q ss_pred HHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHH-HHHHHHhhcCCCCCch
Q 014286 245 AIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM-AIQVAASSSYIPGSAS 319 (427)
Q Consensus 245 ~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 319 (427)
....+.|.+. ++.|.+.. .......+...++.++.|+++||+|||+.+.....+..+.. ..+..... ...
T Consensus 237 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 311 (394)
T TIGR00883 237 LITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD-----SGS 311 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc-----CCc
Confidence 3334455554 55666655 45556677888899999999999999987765544443332 22221111 112
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCM-SVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTF 396 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~ 396 (427)
.+.......+.+.+.+.. .+...+++.|.+|++.|+++.++.+ ....+|..++|.+.|.+.++.| +...++...++
T Consensus 312 ~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMY-TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred hHHHHHHHHHHHHHHHHH-hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 223333333344433333 3445568999999999999999854 4456788899999999999988 66555544443
No 64
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=1.8e-23 Score=192.25 Aligned_cols=331 Identities=13% Similarity=0.085 Sum_probs=201.8
Q ss_pred hhhhhccccccccchhh-hhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHh
Q 014286 59 SSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (427)
Q Consensus 59 ~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 137 (427)
..+..........|.+| .+.+++|++..+. |++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.++
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQYSLSVDLI--GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 34444455555566666 4567889866655 99999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH------HH---------Hh--CCCc------
Q 014286 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF------EK---------LL--GGSH------ 194 (427)
Q Consensus 138 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~---------~~--~~~~------ 194 (427)
+++++.++++|++.|.+.+...+....+..|. ...++..+..... .. +. +...
T Consensus 93 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~ 168 (395)
T PRK10054 93 VNNVTLVVLFFALINCAYSVFSTVLKAWFADN----LSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAA 168 (395)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 99999999999998887776666555555431 1111111110000 00 00 0000
Q ss_pred ---------hhhHHHHHhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---
Q 014286 195 ---------VKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG--- 262 (427)
Q Consensus 195 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--- 262 (427)
.....++.++++++++++..+.++.++++.++......++..............+.+.. .+.+.+..
T Consensus 169 ~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g 247 (395)
T PRK10054 169 ICSAFPLVFIQIWVQRSEKAIATETGSVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV-ADSDFAEKVVA 247 (395)
T ss_pred HHHHHHHHHHHHHHhccccccccchhhhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh-cccchHHHHHH
Confidence 00000011000011111112235667777776655544443332222222333333322 23344333
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
.......+.........|++.||.++|+.+..+..+..++...+..... +.+...+...+++.+.. ...|..
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~-~~~p~~ 319 (395)
T PRK10054 248 VVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN-------SLLLWGMSAAVFTVGEI-IYAPGE 319 (395)
T ss_pred HHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch-------HHHHHHHHHHHHHHHHH-HHHhhH
Confidence 2333333444455677889999999999888887777776655543211 11222333334444432 224455
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
...+.+..|++.++++.+..+ ..++|..+||.+.|.+.|+.|+...|.+.+.+..+..++..
T Consensus 320 ~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 320 YMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 568888899999999998755 67789999999999999999998888776666555544443
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.92 E-value=6.5e-23 Score=186.63 Aligned_cols=299 Identities=14% Similarity=0.120 Sum_probs=191.9
Q ss_pred ccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHH
Q 014286 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGML 145 (427)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 145 (427)
.....+|.+|.+.+++|++.++. |++.+.+.+++.+++++.|+++||+|||+++..+.++..++.+.+ .+++++.++
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVA--GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLF 91 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHH
Confidence 33567899999999999876666 999999999999999999999999999999999999988888887 788999999
Q ss_pred HHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHH---------------HHhCC--C-c-------------
Q 014286 146 LGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFE---------------KLLGG--S-H------------- 194 (427)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------------~~~~~--~-~------------- 194 (427)
+.|++.|++.+...+....++.|. . .+ +...+..... .+... . +
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~---~-~~-~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRD---F-PQ-RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHh---C-cc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999999988766665555531 1 11 1111100000 00000 0 0
Q ss_pred -hhhHHHHHhhhhcCC-CCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHH
Q 014286 195 -VKSSLAELSKLDRGD-DGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVG 269 (427)
Q Consensus 195 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~ 269 (427)
.....++.+++++++ +..+...++.+|++..+...+...+... .+.....+.|.+.++.|.+.. .......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~ 242 (355)
T TIGR00896 167 ALLAWIPQVRRRVAANQTTTRLTPVRIWRSPLAWQVTVFFGLQSG----LYYSLIGWLPAILISHGASAATAGSLLALMQ 242 (355)
T ss_pred HHHHHhhhhccccCCCCCCCCCCCchhhcCHhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 000001111111111 1111234566666665544333322222 233344566666667787765 5666778
Q ss_pred HHHHHHHHhHhhhhcccC-ccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhcc-
Q 014286 270 IANLLGSVVAMVLMDKLG-RKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLP- 347 (427)
Q Consensus 270 ~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 347 (427)
++.++++++.|++.||++ ||+.+..+..+.+++.+.+.+.... . .. ....+++.+.+.. .+...+...
T Consensus 243 ~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~-~~~~l~g~~~g~~-~~~~~~~~~~ 312 (355)
T TIGR00896 243 LAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMH------G--LW-AWALVLGLGQGGA-FPLALTLIGL 312 (355)
T ss_pred HHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhh------H--HH-HHHHHHHHhhhhH-hHHHHHHHHH
Confidence 889999999999999994 6666666666666666555443211 1 11 1223334333322 333333444
Q ss_pred CcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 014286 348 EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 386 (427)
Q Consensus 348 ~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 386 (427)
+..++++++...++.+.+.+++..++|.+.|.+.|+.|.
T Consensus 313 ~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 313 RSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred hccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344456779999999999999999999999999998873
No 66
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=5.8e-23 Score=191.13 Aligned_cols=332 Identities=15% Similarity=0.051 Sum_probs=183.2
Q ss_pred ccccchhhhhh-hccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHH---hhh----
Q 014286 68 GVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---TTR---- 139 (427)
Q Consensus 68 ~~~~~~~~~i~-~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~---- 139 (427)
+...|.+|... +++|++..+. |++.+.+.++..++++++|+++||+|||++++++..+.+++..... .++
T Consensus 27 ~~~~~~~~~~l~~~~g~s~~~~--g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (420)
T PRK09528 27 SSWFSFFPIWLHDINGLSGTDT--GIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQY 104 (420)
T ss_pred HHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566776554 4588866555 9999999999999999999999999999999887666655433221 111
Q ss_pred -hhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHH----HH-----HHHhCCC----------------
Q 014286 140 -NLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEA----EF-----EKLLGGS---------------- 193 (427)
Q Consensus 140 -~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~---------------- 193 (427)
.+...++++++.|.+.....+....+..+..+-............ .+ ..+....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~ 184 (420)
T PRK09528 105 NILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILL 184 (420)
T ss_pred HHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHH
Confidence 111123334444433333322222222110000000000000000 00 0000000
Q ss_pred -----chhhHHHHH--hhhhc--CCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh--
Q 014286 194 -----HVKSSLAEL--SKLDR--GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-- 262 (427)
Q Consensus 194 -----~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-- 262 (427)
..+++.++. +++++ +++......++.+|++..+...+................+.|......+.+.+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (420)
T PRK09528 185 VLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVF 264 (420)
T ss_pred HHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHH
Confidence 000000000 00000 0111112344567777665544433222221111122233333333333344433
Q ss_pred -HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 263 -LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 263 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
.......+...++.++.|++.||+|+|+.+..+..+.+++..++.+..+ .+..+....+.+...... .+.
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~--------~~~~~~~~~l~g~~~~~~-~~~ 335 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG--------PLEVSILKLLHAFEVPFL-LVG 335 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc--------HHHHHHHHHHHHHHHHHH-HHH
Confidence 4555566777889999999999999999988888877776666554321 123333333333333222 223
Q ss_pred hhhhccCcCCccchhhHHHH-HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 342 PSLLLPEIFPSRIRAKAMAV-CMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 342 ~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
...++.|.+|++.+++..+. .++...+|.+++|.+.|.+.|..||+..|.+.+++.++..++..+..++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33477888899999888766 6777889999999999999999999999998888887776666555554
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.91 E-value=9.3e-23 Score=187.15 Aligned_cols=326 Identities=14% Similarity=0.079 Sum_probs=211.3
Q ss_pred HHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHH----HHhhHHHHHH
Q 014286 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF----QLCALPMIIG 131 (427)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l----~~~~~~~~~~ 131 (427)
+.+.++...+..+...|.+|.+.+++|.+.++. |++.+++.+...++++++|+++||+|||+.. ..+..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~i--g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMI--GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 334455555666788899999999999865555 9999999999999999999999999985433 222222222
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCC---hHHHHHHHHHHh------------CCCch-
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGR---TAEAEAEFEKLL------------GGSHV- 195 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~------------~~~~~- 195 (427)
..+..+++++.+++.|+++|.+.+...+...++..+. ...+++ .......+.... +....
T Consensus 86 -~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~---~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f 161 (382)
T TIGR00902 86 -AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW---QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNIL 161 (382)
T ss_pred -HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH---HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHH
Confidence 3455788999999999999999888777776665431 111110 000000000000 00000
Q ss_pred ------------hhHHHHH-hhhhc---CCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCC
Q 014286 196 ------------KSSLAEL-SKLDR---GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL 259 (427)
Q Consensus 196 ------------~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 259 (427)
.....+. +++++ ++.....+.++++|+|+++...+..++..... .....+.+.+.++.|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~----~~~~~~~~~~l~~~g~ 237 (382)
T TIGR00902 162 AILTAGLAFMLIGFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAH----AAYYGFSAIYWQAAGI 237 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHCCC
Confidence 0000000 00000 01111234677888887777666555544432 2223344555566888
Q ss_pred Chh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhh
Q 014286 260 SSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFAL 336 (427)
Q Consensus 260 ~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (427)
+.. .......+..+++.+..+++.||+|+|+.+..+.+...+....+.+..+ .+..+....+.+..++.
T Consensus 238 s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~q~l~g~~~~~ 309 (382)
T TIGR00902 238 SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEA--------FPLIFLLQILHCGTFAV 309 (382)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhh--------HHHHHHHHHHHHHHHHH
Confidence 876 3444566677788888999999999999999999888888877765433 23444455666666665
Q ss_pred cccchhhhhccCcCCccchhhHHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 014286 337 GAGPVPSLLLPEIFPSRIRAKAMAVCMS-VHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAF 403 (427)
Q Consensus 337 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 403 (427)
....... ++.+. |++++++++++++. ...+|..++|.+.|.+.|+.|+ ..|...+++.+++.++
T Consensus 310 ~~~~~~~-~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 310 CHLAAMR-YIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHH-HHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 5555444 78887 88999999999874 5668999999999999999986 5677777777665444
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.91 E-value=2.8e-22 Score=184.70 Aligned_cols=326 Identities=15% Similarity=0.118 Sum_probs=205.8
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
+..+++..+..++..+..+|.+|.+++++|++..+. |++.+.+.+++.+++++.|++.||+|||++++.++++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~--g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQA--ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 445666777778888888999999999999876655 999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhhhHHHHHHHHHHhhhccccccceeecccCC-c-hh-------------------------hhhcC-----
Q 014286 133 SISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTES-P-HW-------------------------LYKKG----- 177 (427)
Q Consensus 133 ~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~-~-~~-------------------------~~~~~----- 177 (427)
+++.. .+|++.+++.|++.|+|.|...+....++.+. | +. +....
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88654 46899999999999999999888777666431 0 00 00000
Q ss_pred ---------------------ChHHHHHHHHHHhCCCchhhHHHHHhhhhcCCC---CCcchhHhhhcccchhHHHHHHH
Q 014286 178 ---------------------RTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDD---GDIVKFEELLYGRHFRVVFIGST 233 (427)
Q Consensus 178 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 233 (427)
.+......+..+...........+.++.+++++ ....+.++++|++.++...+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f 242 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQF 242 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHhChhHHHHHHHHH
Confidence 000000000000000000000000011000001 11123456777777776665555
Q ss_pred HHHhhhccchhHHHHhHHHHHHhc--CCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHH
Q 014286 234 LFALQQLSGINAIFYFSSSVFKSA--GLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 308 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 308 (427)
++...+.. ...+.+.+.++. +.+.+ ...........+|+++++++.||+++|+.+.....+.++..++...
T Consensus 243 ~yvg~e~~----~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~ 318 (410)
T TIGR00885 243 FYVGVQIM----CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF 318 (410)
T ss_pred HHHHHHHH----HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 55443322 223444444433 22322 2334444667899999999999999999888877777766665554
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 014286 309 ASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL---- 384 (427)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---- 384 (427)
... ......+.+.+++.+..+ |...+...+..+++.+..+.++.... +|+++.|++.|.+.|..
T Consensus 319 ~~~---------~~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~ 386 (410)
T TIGR00885 319 AGG---------HVGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAA 386 (410)
T ss_pred cCC---------hHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccc
Confidence 321 122344444555555444 67676888888866544444544443 89999999999999965
Q ss_pred --ccchhHHHHHHH
Q 014286 385 --GPQLLYSIFGTF 396 (427)
Q Consensus 385 --g~~~~~~~~~~~ 396 (427)
+.+..|++...+
T Consensus 387 ~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 387 APAVNTSFILPLLC 400 (410)
T ss_pred cCccchHHHHHHHH
Confidence 366666654333
No 69
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.91 E-value=6e-23 Score=189.62 Aligned_cols=315 Identities=16% Similarity=0.130 Sum_probs=186.7
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
.+.+..+......+......|.+|.+.+++|.+.++. +++.+.+.++..++++++|+++||+|||+++..+.++..++
T Consensus 9 ~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 86 (394)
T PRK11652 9 LLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAV--QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 3444444444555666777888999999999876666 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH------HH---------HHhCC-Cch
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE------FE---------KLLGG-SHV 195 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~---------~~~~~-~~~ 195 (427)
.+++.++++++.+++.|+++|++.+...+....+..|. ...++...+... .. .+... .+.
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~ 162 (394)
T PRK11652 87 TLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDL----YEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWR 162 (394)
T ss_pred HHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 99999999999999999999999887666555444431 111111111000 00 00000 000
Q ss_pred ------------h--hHHHHHhhhhcCC---CCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH-Hhc
Q 014286 196 ------------K--SSLAELSKLDRGD---DGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSA 257 (427)
Q Consensus 196 ------------~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 257 (427)
. ......++.++.+ ++....+++.++++..+...+..+.... .......+.+.+. +..
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 238 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRRFNCYLLMLIGTLA----GIAVFEACSGVLMGAVL 238 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCccccchhHHHHHHHHHHcChHHHHHHHHHHHHHH----HHHHHHHhChHHHHHHc
Confidence 0 0000001111111 1112345566777766554443332221 1222222233333 336
Q ss_pred CCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH
Q 014286 258 GLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTF 334 (427)
Q Consensus 258 g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (427)
|.+.. .......++.+++..+.+++.||.+++.. .......++.+.+...... .....+.......+.+.+.
T Consensus 239 g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 239 GLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW--QSVICCLLAGLLMWIPGWF---GVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHh---ccccHHHHHHHHHHHHHHH
Confidence 77765 34444556677777888888888873322 2222222222222111110 0111233333344444444
Q ss_pred hhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 335 ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 383 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 383 (427)
+. ..|....+..|.+| +++|++.++.+....+|+.+++.+.+.+.+.
T Consensus 314 ~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 314 GM-LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HH-HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 43 34555557778877 6789999999999999999999998887554
No 70
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=1.5e-23 Score=190.80 Aligned_cols=302 Identities=20% Similarity=0.316 Sum_probs=197.5
Q ss_pred HHhhhhhccccccccchhh-hhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHH
Q 014286 57 TLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 135 (427)
+++.+...++.....+.+| .+.+++|.+.++. |++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQI--GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCH--HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 3455666667777888999 8999999887777 999999999999999999999999999999999999999997777
Q ss_pred HhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHHhC-------------CCc--hh----
Q 014286 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKLLG-------------GSH--VK---- 196 (427)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~--~~---- 196 (427)
.+++|++.++++|+++|++.+...+....++.|. ..+++............. ... .+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~ 155 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADW----FPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFL 155 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHH
T ss_pred hhhhhHHHHhhhcccccccccccccccccccccc----chhhhhhhccccccchhhhhhhcccchhhhhhhccccccccc
Confidence 7778888999999999999999999888888862 222333332222111000 000 00
Q ss_pred --------------hHHHHHhhhhcCC---CC---C---cch-hHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHH
Q 014286 197 --------------SSLAELSKLDRGD---DG---D---IVK-FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSS 252 (427)
Q Consensus 197 --------------~~~~~~~~~~~~~---~~---~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
....+.++.++.+ ++ . ..+ ++.+.+++..+..+...++..+ .......+.|.
T Consensus 156 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 231 (352)
T PF07690_consen 156 ISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFF----VFSGFSFFLPL 231 (352)
T ss_dssp HHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred cccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHH----HHHHhhcccch
Confidence 0000000000000 01 0 112 4555656655533333333322 23334455555
Q ss_pred H-HHhcCCC-hh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH
Q 014286 253 V-FKSAGLS-SG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 327 (427)
Q Consensus 253 ~-~~~~g~~-~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
+ .+..+.+ .. .......+...++.++.+++.||+++++..........+....+...... .+........
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 306 (352)
T PF07690_consen 232 YLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS-----SSPVWLIIAL 306 (352)
T ss_dssp HCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH-----CHHHHHHHHH
T ss_pred hhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHH
Confidence 4 5666777 34 34666777778889999999999998777766666655555444432221 1122333344
Q ss_pred HHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHH
Q 014286 328 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVG 374 (427)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~ 374 (427)
.+.+.+.+. ..+....+..|..|++++|++.|+.+...++++.++|
T Consensus 307 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 307 FLIGFGFGI-VFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHH-HCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 444444443 3556666999999999999999999999999999987
No 71
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.91 E-value=1.9e-22 Score=185.81 Aligned_cols=318 Identities=14% Similarity=0.039 Sum_probs=190.8
Q ss_pred ccccchhhh-hhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHH
Q 014286 68 GVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (427)
Q Consensus 68 ~~~~~~~~~-i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 146 (427)
....|.+|. +.+++|++..+. |++.+.+.++..+.++++|+++||+|||+++..+.++.+++.+++.++++++.+++
T Consensus 27 ~~~~~~~~~~~~~~~g~s~~~~--gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 104 (400)
T PRK11646 27 FVVFPLISIRFVDQLGWAAVMV--GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWL 104 (400)
T ss_pred HHHHHHHHHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 444556654 578888765555 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------HhC---------CCc------------hh--h
Q 014286 147 GRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------LLG---------GSH------------VK--S 197 (427)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~---------~~~------------~~--~ 197 (427)
.|+++|++.+...+...+++.+. ...++..++...... ..+ ... .. .
T Consensus 105 ~~~l~g~~~~~~~~~~~~~~~~~----~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 105 SCILSGLGGTLFDPPRTALVIKL----IRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999887777766666542 111111111111000 000 000 00 0
Q ss_pred HHHHHhhh--hcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHH
Q 014286 198 SLAELSKL--DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIAN 272 (427)
Q Consensus 198 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~ 272 (427)
.....++. ++.+++.+.++++.++++.++...+........ ......+.|.+.++.+.++. ......++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~ 256 (400)
T PRK11646 181 NAWLLPAYKLSTVRTPVREGMTRVLRDKRFVTYVLTLTGYYML----AVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLS 256 (400)
T ss_pred HHHhCCcccccccchhhHHHHHHHHcCchHHHHHHHHHHHHHH----HHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHH
Confidence 00000110 001111223456677776655433332222211 11122345555555444433 3333444444
Q ss_pred HHHHHhHhhhh-cccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCC
Q 014286 273 LLGSVVAMVLM-DKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP 351 (427)
Q Consensus 273 ~~~~~~~g~l~-d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 351 (427)
..+....+++. ||++.++.+..+..+.+++...+....+ .+.......+++.+.+. ..|...+++.|..|
T Consensus 257 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~l~~~g~~~-~~p~~~~~~~~~~p 327 (400)
T PRK11646 257 LTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSN--------LQQLFTLICLFYIGSII-AEPARETLSASLAD 327 (400)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHHHHH-HHccHHHHHHhcCC
Confidence 44444445555 4566566666666666666555443321 12222233333333332 23444558889999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cchhHHHHHHHHHHHHHHH
Q 014286 352 SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG----PQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 352 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~ 404 (427)
+++||++.|+.+...++|..++|.+.|.+.|+.+ ....+...+.+.+++.+..
T Consensus 328 ~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 328 ARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred cccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999753 3445555555555554443
No 72
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.90 E-value=6.9e-23 Score=188.24 Aligned_cols=298 Identities=14% Similarity=0.155 Sum_probs=178.3
Q ss_pred cccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHH
Q 014286 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (427)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 144 (427)
+....+.|.+|.+.+++|++.++. +++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSV--QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 344566789999999999876655 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------Hh---------C-CCch------------h
Q 014286 145 LLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------LL---------G-GSHV------------K 196 (427)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~---------~-~~~~------------~ 196 (427)
++.|+++|++.+...+....++.|. ..+++.......... .. . .... .
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDM----FPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 9999999999998877777766652 111111111111000 00 0 0000 0
Q ss_pred --hHHHHHhhhhcCCCCC-------cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HH
Q 014286 197 --SSLAELSKLDRGDDGD-------IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LA 264 (427)
Q Consensus 197 --~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~ 264 (427)
......++..++++++ ..++++.++++..+...+...+... .......+....+.+..|.++. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~s~~~~g~~ 235 (377)
T PRK11102 159 AALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFA---GMFSFLTAGPFVYIELNGVSPQNFGYY 235 (377)
T ss_pred HHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHH---HHHHHHHcCHHHHHHHhCCCHHHHHHH
Confidence 0000001110111111 1233455666554443333222211 1112222222344455677765 45
Q ss_pred HHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhh
Q 014286 265 NVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSL 344 (427)
Q Consensus 265 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (427)
.....++.+++.++.+++.||+|+|+.+..+..+..+..+.+...... +...+.......++..+.+.. .+....
T Consensus 236 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 310 (377)
T PRK11102 236 FALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL----DLGFWALVVGVAAFVGCVSMI-SSNAMA 310 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHHHHHh-hHHHHH
Confidence 666777888999999999999999998888776544433332222110 111122222232333333322 222333
Q ss_pred hccCcCCccchhhHHHHHHHHHH-HHHHHHHHHH
Q 014286 345 LLPEIFPSRIRAKAMAVCMSVHW-VINFFVGLLF 377 (427)
Q Consensus 345 ~~~~~~p~~~~g~~~g~~~~~~~-~g~~~~~~~~ 377 (427)
...|..| +.++++.++.+.... ++..+++.+.
T Consensus 311 ~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 311 VILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677766 789999999887654 4455555443
No 73
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=2.1e-21 Score=179.29 Aligned_cols=337 Identities=15% Similarity=0.087 Sum_probs=195.9
Q ss_pred Hhhhhhccccccccchhhhh-hhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHH-
Q 014286 58 LSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS- 135 (427)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~- 135 (427)
...+........+.|.+|.+ .+++|.+..+. |++.+.+.++..++++++|+++||+|||+.++.+++...++....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 86 (396)
T TIGR00882 9 LFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDT--GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFF 86 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 33444444555667777765 45688765555 999999999999999999999999999999988777665544332
Q ss_pred --Hhh-----hhhHHHHHHHHHHhhhccccccceeecccCCchhh----h---hcCChHHHH-HHHHHHh-CCC------
Q 014286 136 --ATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWL----Y---KKGRTAEAE-AEFEKLL-GGS------ 193 (427)
Q Consensus 136 --~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~----~---~~~~~~~~~-~~~~~~~-~~~------ 193 (427)
.+. +.+..+++.|++.|++.+...+....+..+..+-. . .......+. ..+.... ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~ 166 (396)
T TIGR00882 87 IYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFW 166 (396)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHH
Confidence 112 22344577789999988887777766655421100 0 000000000 0000000 000
Q ss_pred ---------------chhhH-HHHHhhh---hcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH
Q 014286 194 ---------------HVKSS-LAELSKL---DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF 254 (427)
Q Consensus 194 ---------------~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
..++. .++..++ .++++++..+.++.+|++.++...+..+.............+.|.+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~ 246 (396)
T TIGR00882 167 LGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFF 246 (396)
T ss_pred HHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000 0000000 0011122245677788877655444332222211111122223333332
Q ss_pred HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHH
Q 014286 255 KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFV 331 (427)
Q Consensus 255 ~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (427)
++.+.+.. .......+...++.+..+++.||+++|+.+.++..+.++...+.....+ .+.......+.+
T Consensus 247 ~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~--------~~~~~~~~~l~g 318 (396)
T TIGR00882 247 ATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATT--------ALEVVILKMLHA 318 (396)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCC--------hHHHHHHHHHHH
Confidence 22233332 3455556677778889999999999999988888777776655443211 222333333333
Q ss_pred HHHhhcccchhhhhccCcCCccchhhHHHH-HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 332 LTFALGAGPVPSLLLPEIFPSRIRAKAMAV-CMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
.+.... ......+..+..|++.++++.+. .+....+|+++++.+.|.+.|..|++..|.+.+++.++..++..
T Consensus 319 ~~~~~~-~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 319 FEVPFL-LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHH-HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 332221 11223356677788888887776 67888999999999999999999999999998888877766554
No 74
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.89 E-value=1.4e-21 Score=184.14 Aligned_cols=336 Identities=15% Similarity=0.094 Sum_probs=204.0
Q ss_pred HHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc-----chhHH-HHHhhHHHH
Q 014286 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRA-FQLCALPMI 129 (427)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~ 129 (427)
.++.++..+......++.+|...++.|.+.++. |.+ +.....+ ++.+++|+++||+ ||||. ++.+.++.+
T Consensus 17 ~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~i--g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 17 LLILGFASGLPLALTSGTLQAWMTVENIDLKTI--GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 344445556666677888999999988766665 665 4444444 6899999999999 99986 667778787
Q ss_pred HHHHHHHhh---hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH------H---------HHhC
Q 014286 130 IGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF------E---------KLLG 191 (427)
Q Consensus 130 ~~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~---------~~~~ 191 (427)
++..++++. ++++.+.+.|++.|++.+...+...+++.|. ..+++........ . .+..
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~----~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~ 168 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDV----LPAEERGAGAAISVLGYRLAMLVSGGLALWLAD 168 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888887775 4788999999999999988877777777652 1111111111000 0 0000
Q ss_pred -C-Cch------------hhHH-HHHhhhh---cCCCC----CcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHh
Q 014286 192 -G-SHV------------KSSL-AELSKLD---RGDDG----DIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYF 249 (427)
Q Consensus 192 -~-~~~------------~~~~-~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
. .+. .... ...++.+ +++++ ...++++.++++..+......++..... .....+.
T Consensus 169 ~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~---~~~~~~~ 245 (491)
T PRK11010 169 RYLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGD---AFAMSLT 245 (491)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHH---HHHHHHH
Confidence 0 000 0000 0001110 00000 1124566776666554444333332221 1222233
Q ss_pred HHHHHHhcCCChhH---HH-HHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q 014286 250 SSSVFKSAGLSSGL---AN-VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 325 (427)
Q Consensus 250 ~~~~~~~~g~~~~~---~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (427)
.+++.+..|++... .. ....++.+++.+++|+++||+++|+.+..+.++.++..+.+...... ..+.+....
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~----~~~~~~l~~ 321 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT----DKNLYSMGA 321 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc----cccHHHHHH
Confidence 44555667888773 22 23346778999999999999999887776665555444333221111 111122222
Q ss_pred HHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 326 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
...+.....+.+.. ...++..+..+++.+++..|+.+....+|..+++.+.|.+.|..||...|.+.+++++.+.+...
T Consensus 322 ~~~l~~~~~g~~~~-~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 322 AVFFENLCGGMGTA-AFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222 23457778888889999999999999999999999999999999999989888888888766665
Q ss_pred Hh
Q 014286 406 RN 407 (427)
Q Consensus 406 ~~ 407 (427)
..
T Consensus 401 ~~ 402 (491)
T PRK11010 401 VC 402 (491)
T ss_pred HH
Confidence 44
No 75
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.4e-21 Score=168.74 Aligned_cols=327 Identities=18% Similarity=0.193 Sum_probs=224.4
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
.+.+....++.++......+.+|.+++.|+++..+. +++...++.|+.+++++.|.+.+|+|+|+.+++|+.++++++
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a--~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~ 92 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEA--SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGA 92 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHH--HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 445556667778888888999999999999876666 999999999999999999999999999999999999999999
Q ss_pred HHHH---hhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHHhC------------------
Q 014286 133 SISA---TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKLLG------------------ 191 (427)
Q Consensus 133 ~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 191 (427)
.++. -..+|..++++-++.|.|.+...+.+..++.. +..++...+.......+.+
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~----lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~ 168 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTL----LGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGV 168 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHH----hCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 9984 56789999999999999999999999888873 1111000000000000000
Q ss_pred ---CC-------------chhh----------------HHHHHhhhh---cCCCCC-cchhHhhhcccchhHHHHHHHHH
Q 014286 192 ---GS-------------HVKS----------------SLAELSKLD---RGDDGD-IVKFEELLYGRHFRVVFIGSTLF 235 (427)
Q Consensus 192 ---~~-------------~~~~----------------~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
.. .++. ...+.++.+ +++.+. .....+++++|+++...++.+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlY 248 (422)
T COG0738 169 ALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLY 248 (422)
T ss_pred hhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHH
Confidence 00 0000 000000101 111111 11467889999999888888877
Q ss_pred HhhhccchhHHHHhHHHHHHh-cCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhh
Q 014286 236 ALQQLSGINAIFYFSSSVFKS-AGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 311 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
...+.... .+.+.+..+ .|.+.. ........+.++|++++.++..|+...+.+....++..+.++...+...
T Consensus 249 VG~Eva~g----sfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g 324 (422)
T COG0738 249 VGAEVAIG----SFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG 324 (422)
T ss_pred HhHHHHHH----HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77554444 444444444 555544 5667778888999999999999999988888777666655555555433
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Q 014286 312 SYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYS 391 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 391 (427)
...+....+.+.+.+ ...|...+...+..| ++ ....|..-....+|+++.|++.|++.|+.|....+.
T Consensus 325 ---------~v~~~~l~~ig~F~s-imfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 325 ---------VVALYALFLIGLFNS-IMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred ---------hHHHHHHHHHHHHhH-HHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 233444444555444 445666668888888 43 334444555667899999999999999999887777
Q ss_pred HHHHHHHHHH
Q 014286 392 IFGTFCLMAV 401 (427)
Q Consensus 392 ~~~~~~~~~~ 401 (427)
....+|.+..
T Consensus 393 ~~pllc~lyV 402 (422)
T COG0738 393 IVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHH
Confidence 6666666555
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.89 E-value=5.1e-21 Score=175.74 Aligned_cols=320 Identities=14% Similarity=0.116 Sum_probs=195.2
Q ss_pred hhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchh----HHHHHhhHHHHHHHHHHH
Q 014286 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR----RAFQLCALPMIIGASISA 136 (427)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~~~~~~ 136 (427)
+......+...|.+|.+.+|+|.|.++. |++.+++.++..++++++|+++||+||| +.+.++..+. ....+.
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~~g~s~~~i--G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~ 89 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKGQGYTPETI--GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWF 89 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCCHHHH--HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHH
Confidence 3333455778899999999999866655 9999999999999999999999999984 3333222222 223344
Q ss_pred hhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCC---hHHHHHHHHHHhC------------CC--------
Q 014286 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGR---TAEAEAEFEKLLG------------GS-------- 193 (427)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~------------~~-------- 193 (427)
.+++++.+++.|++.|++.+...+...+++.+ |..++++ ..+....+....+ ..
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~---~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANT---WQKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHH---HHhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 56889999999999999988887766655443 1111111 0111000110000 00
Q ss_pred -----chhhH-HHHHhhhhc-CC--CCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh--
Q 014286 194 -----HVKSS-LAELSKLDR-GD--DGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-- 262 (427)
Q Consensus 194 -----~~~~~-~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-- 262 (427)
..... .++.+++++ ++ ++...++++++|++.++...+..++...... ....+.+.+.++.|.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~g~s~~~~ 242 (382)
T PRK11128 167 GVASMLLGQLLRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHA----AYYGFSAIYWQAAGYSASTI 242 (382)
T ss_pred HHHHHHHHHHccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhH----hHHHHHHHHHHHCCCCHhHH
Confidence 00000 000000000 01 1113467888888887766555554443222 222233444456777765
Q ss_pred -HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 263 -LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 263 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
.......+..++..++.+++.||+++|+.+..+....+++...+.... +.+..++..++.+.+++.... .
T Consensus 243 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~g~~~~~~~~-~ 313 (382)
T PRK11128 243 GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--------ALPWLIVIQILHCGTFTVCHL-A 313 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHHHHHHHHH-H
Confidence 344455566777788899999999999998888887777666554332 223444445555555554333 3
Q ss_pred hhhhccCcCCccchhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 014286 342 PSLLLPEIFPSRIRAKAMAVCMSV-HWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 402 (427)
Q Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 402 (427)
...+..+. +++++++..++.+.. ...|..++|.+.|.+.|..|+. .+...+++.+++.+
T Consensus 314 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~~ 373 (382)
T PRK11128 314 AMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHH
Confidence 34466676 556678899988744 4567799999999999998874 66666665554443
No 77
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=1.4e-20 Score=173.46 Aligned_cols=326 Identities=14% Similarity=0.125 Sum_probs=177.8
Q ss_pred hhhhccccccccchhhh-hhhccCCCCchhHHHHHHHHHHH-HHHHHHHhHHhhhcccchhHHH-HHhhHHHHHHHHHHH
Q 014286 60 SFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAF-QLCALPMIIGASISA 136 (427)
Q Consensus 60 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~g~~~s~~~l-~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~ 136 (427)
.++..+......|.+|. +.+++|++.++. |++.+.+.+ +..+++++.|+ +||+||||.+ ..+.++.+++..+.+
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~ 100 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMV--GFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFA 100 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHH
Confidence 44444555556677765 578899876665 998776655 55566655555 9999999875 556676678888889
Q ss_pred hhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHH-H------HHHHHHHhCCC---------chhh---
Q 014286 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAE-A------EAEFEKLLGGS---------HVKS--- 197 (427)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~-~------~~~~~~~~~~~---------~~~~--- 197 (427)
++++++.+++.+.+.|...+...+....++.+ |..++++... . ...+....+.. ..+.
T Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~ 177 (393)
T PRK15011 101 WNRNYFVLLFVGVFLSSFGSTANPQMFALARE---HADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYL 177 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHH---HhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHH
Confidence 99999988766555444444555555555544 1111211110 0 00111111110 0000
Q ss_pred ---------H---HHHHhhhhcCCCCCcchhHhhhcccc-hhHHHHHHHHHHhhhccchhHHHHhHHHH-HHhcCCChh-
Q 014286 198 ---------S---LAELSKLDRGDDGDIVKFEELLYGRH-FRVVFIGSTLFALQQLSGINAIFYFSSSV-FKSAGLSSG- 262 (427)
Q Consensus 198 ---------~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~- 262 (427)
. ....++.++++++.+.+.+...++++ .+..+....... ........+.|.+ .++.+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~l~~~~~~~~~~ 253 (393)
T PRK15011 178 SAAVAFIVCGVMVWLFLPSMRKELPLATGTLEAPRRNRRDTLLLFVICTLMW----GTNSLYIINMPLFIINELHLPEKL 253 (393)
T ss_pred HHHHHHHHHHHHHHhhcCccCCCCccccccccccccccccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHcCCCHHH
Confidence 0 00011111111110111111111211 121111111111 1222223344444 355677765
Q ss_pred --HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccc
Q 014286 263 --LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 340 (427)
Q Consensus 263 --~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (427)
.......+..+++.++.|+++||++||+.+..+.....+....+.... ..+..+....+.....+... +
T Consensus 254 ~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~l~~~~~g~~~-~ 324 (393)
T PRK15011 254 AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--------SPAILLGLQLLNAIYIGILG-G 324 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHH-H
Confidence 333444556677889999999999999877766554444333222111 11222222222222222221 2
Q ss_pred hhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 341 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 341 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
....+..|.+|+ +++++.++++...++|..++|.+.|.+.|..||+..+.+.+++.+++.++.+
T Consensus 325 ~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 325 IGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 223467788884 5999999999999999999999999999999999888877777766655554
No 78
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=9e-23 Score=174.79 Aligned_cols=312 Identities=13% Similarity=0.066 Sum_probs=203.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccce
Q 014286 83 FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVA 162 (427)
Q Consensus 83 ~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 162 (427)
.+.++.++|++.+++.+.+.+.+++.|.+.||+|+|-.+++|++.+..+++++++.++++++++.|.+||+|.+...+.+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 34456667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCCchhhhhcCChHHHHHHHHHHhCCCch----------------------------hh--HHHHHhhhh--cCCC
Q 014286 163 ALYVTESPHWLYKKGRTAEAEAEFEKLLGGSHV----------------------------KS--SLAELSKLD--RGDD 210 (427)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~--~~~~~~~~~--~~~~ 210 (427)
.+++++. +....++..++.......+.... .. ..--.+..+ +++.
T Consensus 181 lamlAd~---f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~ 257 (464)
T KOG3764|consen 181 LAMLADV---FPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST 257 (464)
T ss_pred HHHHHHH---cccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc
Confidence 9999873 22222234443333322211100 00 000011111 1134
Q ss_pred CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcC---CChhHHHHHHHHHHHHHHHhHhhhhcccC
Q 014286 211 GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAG---LSSGLANVFVGIANLLGSVVAMVLMDKLG 287 (427)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 287 (427)
.+..+++++++++..+...... .....+....-+.+.....+... ...++.+....+...++..+.|.+.||++
T Consensus 258 ~~~~~~~~Ll~dP~I~~~agai---~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~ 334 (464)
T KOG3764|consen 258 EQGTPMWSLLMDPYILLIAGAI---TFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYP 334 (464)
T ss_pred ccCccHHHHHhCchHhhhhcch---hhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcC
Confidence 4456688888888765433322 22222222222333333334333 23346778888999999999999999999
Q ss_pred ccchh--hhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCcc---chhhHHHHH
Q 014286 288 RKALL--QWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSR---IRAKAMAVC 362 (427)
Q Consensus 288 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~ 362 (427)
..+.+ ..+.+...++.....+... ....|.......+.+........|... +..|.-..+ ..|...++.
T Consensus 335 ~~~wl~~~~gl~~~G~~~~~iP~~~~-----~~~L~vp~~~l~~~i~~~dasl~P~l~-~lvd~rh~s~~~vYGsVyaIa 408 (464)
T KOG3764|consen 335 HLRWLLSLGGLATVGVSSGPIPFATS-----IAQLWVPNFGLGFGIGLADASLIPTLG-YLVDPRHVSGFNVYGSVYAIA 408 (464)
T ss_pred chhHHHHHHHHHHHHHHhchhHhhhh-----HHHHhhhhHHHHHHHHHHHHHHhhhhH-HhcchhhccccceeeeHHHHH
Confidence 43322 2333333322222222221 111233333333333333444456665 455544444 679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 014286 363 MSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 363 ~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 406 (427)
.....+|.++||.++|.+.+..|+.+...+.+...++-+-+...
T Consensus 409 d~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 409 DAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888887776655433
No 79
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.88 E-value=1.2e-21 Score=179.31 Aligned_cols=298 Identities=17% Similarity=0.125 Sum_probs=181.4
Q ss_pred HHHHhhhhhccccccccchhhh-hhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHH
Q 014286 55 VATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (427)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 133 (427)
..+++.+..........+.+|. +++++|++.++. +++.+++.+++.++++++|+++||+|||++++.+.++..++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQL--GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHh--hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 3444555555566677888995 999999876666 9999999999999999999999999999999999999999999
Q ss_pred HHHhhh-hhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH--------------HH-HHhC------
Q 014286 134 ISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE--------------FE-KLLG------ 191 (427)
Q Consensus 134 ~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------------~~-~~~~------ 191 (427)
++++++ +++.+++.|+++|++.+.. +....++.|. . .++++..+... +. .+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~---~-~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 157 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGSF-ASCMPWISFF---F-PKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGA 157 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchhh-HhHHHHHHHh---c-CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999 9999999999999986543 4444555431 1 11111110000 00 0000
Q ss_pred -------CCchh-h---------------HHHHHhhh-hcCCCCCcc------------hhHhhhcccchhHHHHHHHHH
Q 014286 192 -------GSHVK-S---------------SLAELSKL-DRGDDGDIV------------KFEELLYGRHFRVVFIGSTLF 235 (427)
Q Consensus 192 -------~~~~~-~---------------~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 235 (427)
....- . ..++.++. +++++.+.. ..++.++++..+...+...+.
T Consensus 158 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (366)
T TIGR00886 158 GLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVT 237 (366)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHH
Confidence 00000 0 00000000 000000000 445566666665544443333
Q ss_pred HhhhccchhHHHHhHHHHH-HhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhh
Q 014286 236 ALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 311 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
... ......+.+.+. +..|.+.. .......+..+++.++.|++.||+|+|+.+..+......+..++.....
T Consensus 238 ~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 313 (366)
T TIGR00886 238 FGS----FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV 313 (366)
T ss_pred HHH----HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC
Confidence 322 222333344344 45676655 4555667778889999999999999988777776665555544443221
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHH
Q 014286 312 SYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVI 369 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 369 (427)
.+...+.......+.....+.+.. .......+..| +++|++.|+.+..+++|
T Consensus 314 ----~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 314 ----SPLSLAVFIVLFVALFFFSGAGNG-STFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred ----CcchHHHHHHHHHHHHHHhccccc-hhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 000222333333333444443333 34447778877 68999999999988765
No 80
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.87 E-value=9.8e-21 Score=177.00 Aligned_cols=319 Identities=18% Similarity=0.187 Sum_probs=210.4
Q ss_pred ccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhh-----hhhH
Q 014286 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----RNLI 142 (427)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~ 142 (427)
.+....++-+..+. +.+....+++.++..+...+.+++.|.++||++|||+++.+-++..+..+..++. .+.+
T Consensus 27 ~~~~va~~wlv~~l--t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~ 104 (524)
T PF05977_consen 27 WMQTVALAWLVTQL--TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPW 104 (524)
T ss_pred HHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHH
Confidence 33344555555444 4577777999999999999999999999999999999999998877665554432 4788
Q ss_pred HHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------HhCCC------------c---------h
Q 014286 143 GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------LLGGS------------H---------V 195 (427)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~------------~---------~ 195 (427)
.+++.-++.|++.+...|.-.++++| +..+++...+...... ..+.. . .
T Consensus 105 ~Ll~~~fl~g~~~a~~~PA~~A~ip~----lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl 180 (524)
T PF05977_consen 105 LLLILTFLLGIGSAFFNPAWQAIIPE----LVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFL 180 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----hccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999987 4444444433322111 11110 0 0
Q ss_pred --hhHHHHHhhhhcCCCCC--------cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh--
Q 014286 196 --KSSLAELSKLDRGDDGD--------IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG-- 262 (427)
Q Consensus 196 --~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~-- 262 (427)
.......+...++++.. +..++-+.+++..+..++...+..+... .....+|.+. +..+.++.
T Consensus 181 ~~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~----a~~aLlPl~a~~~l~~~a~~y 256 (524)
T PF05977_consen 181 ISILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFAS----AVWALLPLFARDVLGGGASGY 256 (524)
T ss_pred HHHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhh----HHHHhhhHHHHHHhCCcHHHH
Confidence 00000111111111111 1223333445555544443333333222 1222344443 34565555
Q ss_pred -HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 263 -LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 263 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
+.....+++.++|.++.+++.+|+++++.+..+.++.+++.+.+++..+ .+.....+++.+.+..... ..
T Consensus 257 Gll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~--------~~~~~~~l~l~G~~~~~~~-~~ 327 (524)
T PF05977_consen 257 GLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPS--------FWLALIALFLAGAAWIIAN-SS 327 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchH--------HHHHHHHHHHHHHHHHHHH-HH
Confidence 6777888999999999999999999988888888877777766665433 2344444555555544433 33
Q ss_pred hhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 342 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
..+..++..|++.||++.+++++....+..+|..+.|.+.+..|....+.+.++..+++.++..
T Consensus 328 ~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 328 LNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 4457888899999999999999999999999999999999999998888777766655555543
No 81
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=4.9e-21 Score=175.93 Aligned_cols=316 Identities=15% Similarity=0.128 Sum_probs=203.3
Q ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhh--hhHHHHHHHHHHhhhc
Q 014286 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGM 155 (427)
Q Consensus 78 ~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~ 155 (427)
..+++++.++ .|++.+.++.|+.+++++.|+++||||-|+++..+.++.++++++...+. +++.+++.|++||++.
T Consensus 65 ~~~~~ws~~~--k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTE--KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred CceecCCHHH--HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHH
Confidence 3456665444 49999999999999999999999999999999999999999999998875 5568899999999999
Q ss_pred cccccceeecccC------Cchh---------------------hhhc-CChHHHHHH----------HH-HHhCCC---
Q 014286 156 GLGPTVAALYVTE------SPHW---------------------LYKK-GRTAEAEAE----------FE-KLLGGS--- 193 (427)
Q Consensus 156 g~~~~~~~~~i~~------~~~~---------------------~~~~-~~~~~~~~~----------~~-~~~~~~--- 193 (427)
|..+++...+... ..++ +... ..++...-. +- .+....
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999988877662 0000 0000 011100000 00 000000
Q ss_pred ---chhhHHHHHhhhhcCCC---CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChh---H
Q 014286 194 ---HVKSSLAELSKLDRGDD---GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---L 263 (427)
Q Consensus 194 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~---~ 263 (427)
...+|.+.+++...+++ +.+.+++++++++..|..+++.+.... ....+..|.|.++ +.++++.. +
T Consensus 223 h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~----~~~~l~~y~PtY~~~VL~f~v~~~G~ 298 (466)
T KOG2532|consen 223 HPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNW----GFYLLLTYLPTYLKEVLGFDVRETGF 298 (466)
T ss_pred CCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHH----HHHHHHHHhhHHHHHHhCCChhhhhH
Confidence 01122333332222221 136789999999988877776655544 3445555555555 44666654 7
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccCcc---------chhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH
Q 014286 264 ANVFVGIANLLGSVVAMVLMDKLGRK---------ALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTF 334 (427)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (427)
..++..+...+..+++|.++||..+| ..-.++....+++++.+.+... ...+..++++.+.....
T Consensus 299 ~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~------~~~~~a~~~l~~~~~~~ 372 (466)
T KOG2532|consen 299 LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSD------EHRLLAVILLTIAIGLS 372 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCC------CcchHHHHHHHHHHHHc
Confidence 78888899999999999999987552 2223344444444444443321 11122222222222222
Q ss_pred hhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH---HhccchhHHHHHHHHHHHHHHHHHh
Q 014286 335 ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE---QLGPQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
+ ...+-...-..+..| ++.+..+|+.+.+..+.++++|.+.|.+.. ...|+.+|++.+++.+++.++..++
T Consensus 373 g-~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 373 G-FNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred c-cchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 2 222222212333344 889999999999999999999999999983 3469999999999988887665444
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.87 E-value=1.3e-20 Score=197.12 Aligned_cols=312 Identities=15% Similarity=0.089 Sum_probs=192.3
Q ss_pred cchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHH---hhhhhHHHHHH
Q 014286 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---TTRNLIGMLLG 147 (427)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~ 147 (427)
..+.+.+..+++.+.+....+++.+++.+++.++++++|+++||+|||++++++.++..++.++.. .+++++.++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 109 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAV 109 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 344556667777766666679999999999999999999999999999999998877666655544 45789999999
Q ss_pred HHHHhhhccccccceeecccCCchhhhhcCChHHHHHHH--------------H-HHhCC----------Cch-------
Q 014286 148 RFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEF--------------E-KLLGG----------SHV------- 195 (427)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------------~-~~~~~----------~~~------- 195 (427)
|+++|++.+...+...+++.|. ...++...+.... . .+... ...
T Consensus 110 r~l~G~~~~~~~~~~~~~i~~~----~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 185 (1146)
T PRK08633 110 TFLLGAQSAIYSPAKYGIIPEL----VGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVL 185 (1146)
T ss_pred HHHHHHHHHhhchHHHhhhHHh----cCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHH
Confidence 9999999999999888888862 1111111110000 0 00000 000
Q ss_pred ----------hhHHHHHhhhhcCC--CC---C----cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHh
Q 014286 196 ----------KSSLAELSKLDRGD--DG---D----IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS 256 (427)
Q Consensus 196 ----------~~~~~~~~~~~~~~--~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
....++.++..... +. . ...++.+++++..+..++...+..+.. .....++.+++.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 262 (1146)
T PRK08633 186 LAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFIS---QLAQANFPAYAKEV 262 (1146)
T ss_pred HHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH---HHHHHhhHHHHHHH
Confidence 00000000000000 00 0 122445566665555444443333221 22222333444455
Q ss_pred cCCChh----HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHH
Q 014286 257 AGLSSG----LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVL 332 (427)
Q Consensus 257 ~g~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (427)
.|.+.. +......++.+++.++.+++.||+++++.+.++.++.+++.+++.+..+ .+..++..++++.
T Consensus 263 ~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~ 334 (1146)
T PRK08633 263 LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPS--------LASVLVLFFLFGF 334 (1146)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHH
Confidence 666544 4566677888899999999999999988888777777766665554321 2233344444444
Q ss_pred HHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHH
Q 014286 333 TFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--PQLLYSIFGTFCLM 399 (427)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~ 399 (427)
+.+.... ...+++.+..|++.||+++|+.+++.+++.++++.+.+.+.. .+ +...+.+.+.+.++
T Consensus 335 ~~~~~~~-~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 335 SAGLFIV-PLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHhhH-HHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHH
Confidence 4443333 344588899999999999999999999999888777665543 33 33344444444333
No 83
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.87 E-value=4.1e-20 Score=172.02 Aligned_cols=341 Identities=16% Similarity=0.168 Sum_probs=224.6
Q ss_pred hHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
+-|.+++..++......-....++...+.++++++-+.++. +|+.++......+..|+.+.+.||||.|++.+.|.++
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~--~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQI--AWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHH--HHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 34555555555554443334455678899999999877775 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHH-HHHHhhhccccccceeecccCCchhhhhcCC----------------------------
Q 014286 128 MIIGASISATTRNLIGMLLG-RFVVGTGMGLGPTVAALYVTESPHWLYKKGR---------------------------- 178 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~-r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~---------------------------- 178 (427)
.+++.++.++++++|++++. -++.|+|.|..+..+..++.. |+.+++.
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~---YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~ 197 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGT---YFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhh---HhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh
Confidence 99999999999999887655 578899999888887777762 2222111
Q ss_pred -hHHHHHHHHH----------HhCCCchhh-HH--------------------HHH------------------hhhhcC
Q 014286 179 -TAEAEAEFEK----------LLGGSHVKS-SL--------------------AEL------------------SKLDRG 208 (427)
Q Consensus 179 -~~~~~~~~~~----------~~~~~~~~~-~~--------------------~~~------------------~~~~~~ 208 (427)
+......... ......... +. ... ++.+++
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDK 277 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCcc
Confidence 1111111100 000000000 00 000 000000
Q ss_pred CC--CCcchh----HhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhH
Q 014286 209 DD--GDIVKF----EELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVA 279 (427)
Q Consensus 209 ~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~ 279 (427)
.. ..+... .++++++.+..+.+...+..+ .+.....+++.+.+..+++.. ....+.++..++++++.
T Consensus 278 ~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~----g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~ 353 (509)
T KOG2504|consen 278 WRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYL----GFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIIL 353 (509)
T ss_pred ccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHH----HHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhh
Confidence 00 011111 356666555544444433333 455666677777778888776 67778889999999999
Q ss_pred hhhhcccCcc--chhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhh
Q 014286 280 MVLMDKLGRK--ALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAK 357 (427)
Q Consensus 280 g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 357 (427)
|++.|+...+ ....++.+..+++...+...... +.......+++...+ .........+.|+.+.++-..
T Consensus 354 G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~--------~~l~~~~~~fG~~~g-~~~~l~~~i~~~~~g~~~l~~ 424 (509)
T KOG2504|consen 354 GLLADKPGIRALVLFLLTLLIAGLARLFLPFATTY--------VGLIVFSILFGFCVG-SFSSLTPVILVDLVGLEKLSN 424 (509)
T ss_pred hhhcCccccchHHHHHHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHH-HHHHHHHHHHHHHcChhhcch
Confidence 9999998743 34444555555554444433221 223333333333332 223444447889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHH
Q 014286 358 AMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 358 ~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 406 (427)
+.|+...+..++..+||++.|.+.|..| |...|...+++.+++..+...
T Consensus 425 a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 425 AYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred HHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHH
Confidence 9999999999999999999999999988 888898888888777755543
No 84
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.86 E-value=4.6e-19 Score=150.94 Aligned_cols=336 Identities=17% Similarity=0.146 Sum_probs=223.9
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
.+..+.+..+-.--..+.++|+++++++|+|+|.+.. |++.++..++..+.+++..+++.|+|.++.+..++++..++
T Consensus 13 li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~a--GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 13 LLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVA--GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred HHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444444445555667888999999999999987777 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCC-chh-------------------------hhhcC-ChHHHHH
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTES-PHW-------------------------LYKKG-RTAEAEA 184 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~-~~~-------------------------~~~~~-~~~~~~~ 184 (427)
.++-... +.+.++.+-.+.|.|.+...+..+..+.+. |+- +..+. .+..+..
T Consensus 91 ~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~ 169 (395)
T COG2807 91 ILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALG 169 (395)
T ss_pred HHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHH
Confidence 9999887 888899999999999998888888877741 110 00000 1111111
Q ss_pred HHHHHhCCCchhhHHHH-HhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh-
Q 014286 185 EFEKLLGGSHVKSSLAE-LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG- 262 (427)
Q Consensus 185 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~- 262 (427)
.......... ..-.+. .++.....+.+..+-..++|++.-|...+-+.+ +...++....|+|.+..+.|++..
T Consensus 170 ~WAl~allAl-~~WlPq~~r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGl----qS~~~Y~~~~WLP~ili~~G~sa~~ 244 (395)
T COG2807 170 FWALLALLAL-LIWLPQALREQAASIATKLVSVRKVWRSPLAWQVTLFMGL----QSLLYYIVIGWLPAILIDRGLSAAE 244 (395)
T ss_pred HHHHHHHHHH-HHHhhhcccccccccccccccccccccCchhHHHHHHHHh----hHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1111000000 000111 111011111222233457777766654443333 333566677788889999999987
Q ss_pred --HHHHHHHHHHHHHHHhHhhhhccc-CccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhccc
Q 014286 263 --LANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG 339 (427)
Q Consensus 263 --~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (427)
.......+..++.++....+.+|. ++|+.......++.++.+.+.+.+... ++. ..++.+.+.+..+
T Consensus 245 aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~------~~l---w~~llG~G~G~~F- 314 (395)
T COG2807 245 AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL------PIL---WALLLGLGQGGAF- 314 (395)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH------HHH---HHHHHhCccchHH-
Confidence 566677788888899999999964 577777777777777777766554321 111 1234444433332
Q ss_pred chhhhhccC-cCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHH
Q 014286 340 PVPSLLLPE-IFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 340 ~~~~~~~~~-~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 405 (427)
|.....+.+ .-.++..+.-.|+.+.++++-...||.+.|.+.|..| |...+..++.+.++..+..+
T Consensus 315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl 382 (395)
T COG2807 315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGL 382 (395)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHh
Confidence 333334433 3345677888999999999999999999999999987 66666666665555555444
No 85
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.86 E-value=7e-20 Score=169.39 Aligned_cols=330 Identities=17% Similarity=0.106 Sum_probs=198.1
Q ss_pred HHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc-----chhH-HHHHhhHHHHH
Q 014286 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRR-AFQLCALPMII 130 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~~~~~ 130 (427)
..-++..++..+.....+|.+.++.|++.++. |++..+... .+.++++|+++||+ |||| .++++.++.++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~i--g~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTI--GFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 34466677778888889999999999877766 888766665 58999999999999 8875 68888888888
Q ss_pred HHHHHHhh---hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH------HHH---------HhCC
Q 014286 131 GASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE------FEK---------LLGG 192 (427)
Q Consensus 131 ~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~---------~~~~ 192 (427)
+..+.++. .+++.+++..++.++..+...+...++++|. ..++++...... +.. +...
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~----~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDV----LHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 88888886 3577888888888888877777777776652 122211111100 000 0000
Q ss_pred --Cch-----------hh--HHHHHhhhhcCC--C-----CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhH
Q 014286 193 --SHV-----------KS--SLAELSKLDRGD--D-----GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS 250 (427)
Q Consensus 193 --~~~-----------~~--~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
.+. .. .....+++++.+ + +...+++++++++.++..++...+........ ..+..
T Consensus 157 ~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~---~~~~~ 233 (402)
T PRK11902 157 VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFA---GSLST 233 (402)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH---HHHHH
Confidence 000 00 000001110100 0 11234667788887776655544433322111 12233
Q ss_pred HHHHHhcCCChhHHHHH---HH-HHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 014286 251 SSVFKSAGLSSGLANVF---VG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 326 (427)
Q Consensus 251 ~~~~~~~g~~~~~~~~~---~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
+++.++.|.++...... .+ ++.+++.++++++.||+++|+.+..+..+..+..+.+...... ..+.+.....
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~----~~~~~~~~~~ 309 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT----PKHLWTMALA 309 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHHHHHH
Confidence 44556678887733333 22 3567889999999999999888776666655544333221111 1112222222
Q ss_pred HHH----HHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 014286 327 MLM----FVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 402 (427)
Q Consensus 327 ~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 402 (427)
..+ .+...+ ...+....++.+.+|.++ .++.+....++..+++.+.|.+.|..||+..|.+.+++++++.+
T Consensus 310 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~ 384 (402)
T PRK11902 310 IGIENLCGGMGTA-AFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLA 384 (402)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 221 111121 223444447777766544 45666666778777778999999999999999888888877766
Q ss_pred HHHH
Q 014286 403 FVKR 406 (427)
Q Consensus 403 ~~~~ 406 (427)
+.+.
T Consensus 385 ~~~~ 388 (402)
T PRK11902 385 LLWL 388 (402)
T ss_pred HHHH
Confidence 5543
No 86
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4.6e-20 Score=169.82 Aligned_cols=246 Identities=18% Similarity=0.164 Sum_probs=167.7
Q ss_pred CchhHHHHHHHHHHhhhhhcccccccc-chhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHH
Q 014286 45 SWKLSFPHVLVATLSSFLFGYHLGVVN-EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (427)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~ 123 (427)
.+|..+.++..+++.++....+...++ +.+..+.+|.+...++. +.+.++|.++++++++++|.+.||++-.+.+..
T Consensus 39 ~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l--~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~ 116 (495)
T KOG2533|consen 39 LRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQL--GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSV 116 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhh--hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHH
Confidence 344556677777888888888776554 33456778888766666 999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHH--------------HHHHH
Q 014286 124 CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEA--------------EFEKL 189 (427)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------------~~~~~ 189 (427)
..+++++.+++....+|++.+++.|++.|+..+..+|....++.. |+. +.+...... .+...
T Consensus 117 ~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~---wy~-~~e~g~r~~~~~a~~~~g~i~ggliA~g 192 (495)
T KOG2533|consen 117 SGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGN---WYG-KSERGLRMGIWYASASLGNIFGGLIAYG 192 (495)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHh---hcC-hhhhhhhHHHHHHhcchhhHHHHHHHHH
Confidence 999999999888889999999999999999999999999888873 111 111100000 00000
Q ss_pred --------------------------hC------CCc------hh-hHH-----HHHhhhhc---CCCCCcchhHhhhcc
Q 014286 190 --------------------------LG------GSH------VK-SSL-----AELSKLDR---GDDGDIVKFEELLYG 222 (427)
Q Consensus 190 --------------------------~~------~~~------~~-~~~-----~~~~~~~~---~~~~~~~~~~~~~~~ 222 (427)
.+ .+. .. ++. ++.++.+. .++.++..+++.+++
T Consensus 193 ~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d 272 (495)
T KOG2533|consen 193 VFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKD 272 (495)
T ss_pred hhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhc
Confidence 00 000 00 011 11111111 111344567788888
Q ss_pred cchhHHHHHHHHHHhhhccchhHHHHhHHHHHHh-cCCChh---HHHHHHHHHHHHHHHhHhhhhcc----cCccchhhh
Q 014286 223 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS-AGLSSG---LANVFVGIANLLGSVVAMVLMDK----LGRKALLQW 294 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~ 294 (427)
+..+...++.++... ..+.+.+|.|.+.++ .+++.. .+..+..++++++.+++|+++|| ..+|.....
T Consensus 273 p~vw~~~l~~~~~~l----v~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~ 348 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKL----VNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIV 348 (495)
T ss_pred hhHHHHHHHHHHHhh----ccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 888877776666555 445566677777766 335443 68888999999999999999999 445554444
Q ss_pred hhHHHH
Q 014286 295 SFFSMA 300 (427)
Q Consensus 295 ~~~~~~ 300 (427)
...+..
T Consensus 349 ~~~~~~ 354 (495)
T KOG2533|consen 349 FLCLYA 354 (495)
T ss_pred HHHHHH
Confidence 444333
No 87
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.2e-20 Score=154.21 Aligned_cols=347 Identities=17% Similarity=0.108 Sum_probs=208.1
Q ss_pred CchhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc-cchhHHHHH
Q 014286 45 SWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQL 123 (427)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~ 123 (427)
...+++..++..|+..|-.+++....+....+..+|.+++.++. .++.+.|.....+-+.+.|++.|| +|-|..-++
T Consensus 38 ~l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akf--tLlYsvYSwPNvVlcffgGflidr~fgir~gtii 115 (459)
T KOG4686|consen 38 ALGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKF--TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTII 115 (459)
T ss_pred hhhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeee--eeeeeeccCCCEEEeeecceeehhhhhhhHHHHH
Confidence 34455667778888888888888887777778888888876666 699999999999999999999997 788877766
Q ss_pred hhHHHHHHHHHHHh---hhhhHHHHHHHHHHhhhccccccceeecccC----------------------C-----chhh
Q 014286 124 CALPMIIGASISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTE----------------------S-----PHWL 173 (427)
Q Consensus 124 ~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~----------------------~-----~~~~ 173 (427)
-++...++-+.++. .+.+|.++++|++.|+|.-...++...|+.- + -.|+
T Consensus 116 ~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 116 LCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 66666777777654 7899999999999999977666666665551 0 0011
Q ss_pred hhc------CChHHHHHHHHHHh------------CCCchhhHHHHHhhhhcCCCCCcchhHhhhc-ccchhHHHHHHHH
Q 014286 174 YKK------GRTAEAEAEFEKLL------------GGSHVKSSLAELSKLDRGDDGDIVKFEELLY-GRHFRVVFIGSTL 234 (427)
Q Consensus 174 ~~~------~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (427)
... +...........+. .....++..+.+-+.++....+..+..+... .+.+|.+.+...+
T Consensus 196 y~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~ 275 (459)
T KOG4686|consen 196 YDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVL 275 (459)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHH
Confidence 100 00000000000000 0000111111111111111111122222211 2345554444444
Q ss_pred HHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhh
Q 014286 235 FALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 311 (427)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
+....+. .+..-...+.+++|+++. .+.........+.+++.|.++||+|++...+.+..+..+..-...+...
T Consensus 276 yyva~fP---Fi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~ 352 (459)
T KOG4686|consen 276 YYVAWFP---FITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF 352 (459)
T ss_pred HHHHHHH---HhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh
Confidence 4332222 111222344567888876 3444555566677889999999999997777666555444333222221
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c---c
Q 014286 312 SYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-P---Q 387 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~---~ 387 (427)
+.....+.+.+....... ...+..++.+.|+++.|++.|..+.+.++|-++.|.++|.+.|+-| + .
T Consensus 353 ---------lsPy~~m~~lGLsysllA-cslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le 422 (459)
T KOG4686|consen 353 ---------LSPYTSMTFLGLSYSLLA-CSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLE 422 (459)
T ss_pred ---------ccHHHHHHHHhhhHHHHH-HHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHH
Confidence 123334444444443322 2234466777888999999999999999999999999999999876 2 2
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 014286 388 LLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~ 406 (427)
..|++...+.++...+.+.
T Consensus 423 ~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 423 AFFLIIGLMALTSVGILFY 441 (459)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 3444444455555444443
No 88
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.85 E-value=7e-20 Score=191.07 Aligned_cols=338 Identities=14% Similarity=0.060 Sum_probs=193.2
Q ss_pred HHHHHhhhhhccccccccch-hhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHH---hhHHHH
Q 014286 54 LVATLSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL---CALPMI 129 (427)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~ 129 (427)
...+++.+.+++....+... ...+..+.+.+. ....++..+++.+++.++++++|+++||+|||+++.. ..++..
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~ 96 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAYN-NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIA 96 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccch-HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHH
Confidence 33344444444333222222 224444443322 2334888999999999999999999999999997633 333333
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHH------HhC---------CCc
Q 014286 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEK------LLG---------GSH 194 (427)
Q Consensus 130 ~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~---------~~~ 194 (427)
+..+.+...+|+++++++|+++|++.+...+...+++++. ...++...+...... ..+ ...
T Consensus 97 ~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~----~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~ 172 (1140)
T PRK06814 97 ALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDH----LNKDELLGANALVEAGTFIAILLGTIIGGLATISGN 172 (1140)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhh----cCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3334444458999999999999999999999999988862 222222211111110 000 000
Q ss_pred hhh------------H-H-HHHhhhhcC-C--CCC-------cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhH
Q 014286 195 VKS------------S-L-AELSKLDRG-D--DGD-------IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS 250 (427)
Q Consensus 195 ~~~------------~-~-~~~~~~~~~-~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
... . . ...++.+.. + +.. ...++.+.+++.++...+...+..+.. .....+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 248 (1140)
T PRK06814 173 FVILVALLMGIAVLGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVG----AVVLSQL 248 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH----HHHHHHh
Confidence 000 0 0 000010000 0 000 123455666666666555544443322 2222233
Q ss_pred HH-HHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcC-C-----------
Q 014286 251 SS-VFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY-I----------- 314 (427)
Q Consensus 251 ~~-~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------- 314 (427)
|. ..+..|.+.. ......+++.+++.++.|+++|+..+++.+..+.++.+++.+.+.+..... .
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVF 328 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhh
Confidence 43 3344676655 566777889999999999999988777666655555555444333320000 0
Q ss_pred CCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHH
Q 014286 315 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LGPQLLYSIF 393 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~ 393 (427)
......+...+..++++++.+....+ ..+++.+..|++.+|+++|+.+++..++..+++.+.|.+.+. .++...+.+.
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~ 407 (1140)
T PRK06814 329 LSKRHGWRILIDLFGLAAAGGLYIVP-LFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFI 407 (1140)
T ss_pred hcccccHHHHHHHHHHHHHHHHhHHH-HHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 00122233444444455544443334 455889999999999999999999999999999999998753 3455555554
Q ss_pred HHHHHHHH
Q 014286 394 GTFCLMAV 401 (427)
Q Consensus 394 ~~~~~~~~ 401 (427)
+++.++..
T Consensus 408 ~~~~~~~~ 415 (1140)
T PRK06814 408 ALANLIVA 415 (1140)
T ss_pred HHHHHHHH
Confidence 44434333
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.84 E-value=5e-19 Score=164.92 Aligned_cols=320 Identities=16% Similarity=0.147 Sum_probs=188.1
Q ss_pred hHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 48 LSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
+.+..+...++......+.....+.+++.+..|+|-++. . .|+.+.+.++.+++.++.|+++|.||||.+++.+.++
T Consensus 41 ~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~-~--~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l 117 (599)
T PF06609_consen 41 RFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDN-W--SWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLL 117 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCcc-c--hHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Confidence 333333344444444555556667788999999996433 3 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeeccc------------------------------------CCch
Q 014286 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT------------------------------------ESPH 171 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~------------------------------------~~~~ 171 (427)
..+|++.++.++|...++++-.+.|+|.|...... ..++ .+||
T Consensus 118 ~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~~-~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WR 196 (599)
T PF06609_consen 118 GVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELAA-LAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWR 196 (599)
T ss_pred HHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHHH-HHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcc
Confidence 99999999999999999999999999987544321 1122 2455
Q ss_pred hhhhcCChHHHHHHHH--HHhCCCc----------hhhHHHH--------------------------------------
Q 014286 172 WLYKKGRTAEAEAEFE--KLLGGSH----------VKSSLAE-------------------------------------- 201 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~~-------------------------------------- 201 (427)
|.+.....-.....+. ..+.... .++..++
T Consensus 197 w~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~ 276 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAP 276 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhh
Confidence 4211110000000000 0000000 0000000
Q ss_pred ----------HhhhhcC-CCCCcchhHhhhccc-chhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCCh------hH
Q 014286 202 ----------LSKLDRG-DDGDIVKFEELLYGR-HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS------GL 263 (427)
Q Consensus 202 ----------~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------~~ 263 (427)
.--.+.. ..+++.-..+++|++ .+...++..++... ..+....+|.+.....++.+. ..
T Consensus 277 lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~---~~~s~~~l~p~~~~~vf~~d~~~~~~~~~ 353 (599)
T PF06609_consen 277 LVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGM---NFFSVNILWPQQVVNVFGSDPISITEIGW 353 (599)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhccCCCcccceeeh
Confidence 0000000 011122234556553 23222233323222 233444455555554444432 25
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccCc-cchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 264 ANVFVGIANLLGSVVAMVLMDKLGR-KALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
...+.+++..++.++.|.+..+++| |+.++++..++.++..++..... +..+.. +....+.+++.+....+..
T Consensus 354 ~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~----~n~~~~--i~~~~l~g~giG~~~~~~~ 427 (599)
T PF06609_consen 354 ISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRP----DNKNAA--IAFLVLAGFGIGGILVPAI 427 (599)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccC----CCcchH--HHHHHHHHHhHHHHHHHHH
Confidence 6677888888888989999988876 55556666666554444443221 111122 2223333444433333333
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL 381 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 381 (427)
. .++-..|+++-|++.|+..+++.+|+.++..+...+.
T Consensus 428 ~-~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 428 V-IAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred H-eeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3 5556789999999999999999999999998876544
No 90
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.84 E-value=3.2e-19 Score=162.13 Aligned_cols=340 Identities=17% Similarity=0.147 Sum_probs=212.0
Q ss_pred hhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccc-hhHHHHHhhHHHHHHHHHHHhh
Q 014286 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQLCALPMIIGASISATT 138 (427)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~ 138 (427)
+++..+..+...|.+|.+-++.|+|..+. |.+.+...+...++++++|.++||++ +|+++.+..++.++........
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~~G~s~~qI--G~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~ 88 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLESRGFSGTQI--GILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444555667788899999999765655 99999999999999999999999986 6778878778777777777788
Q ss_pred hhhHHHHHHHHHHhhhccccccceeecccC----CchhhhhcCCh---HHHHHH---HHHHhCC---Cch----------
Q 014286 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTE----SPHWLYKKGRT---AEAEAE---FEKLLGG---SHV---------- 195 (427)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~----~~~~~~~~~~~---~~~~~~---~~~~~~~---~~~---------- 195 (427)
++++.+++.-++..+......+...++.-+ ..+-+...+-+ .-.... .....+. ...
T Consensus 89 ~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 168 (400)
T PF03825_consen 89 SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAIL 168 (400)
T ss_pred ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHH
Confidence 899988888888887766655555444332 11101000000 000010 0000000 000
Q ss_pred ---hh----HHHHHhhhhc-C---CCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcC-CChh-
Q 014286 196 ---KS----SLAELSKLDR-G---DDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAG-LSSG- 262 (427)
Q Consensus 196 ---~~----~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~- 262 (427)
.. ..++.+.+++ + ++....+..+++|+|+....++..++.... ......|.+.+.++.| .+..
T Consensus 169 ~~ll~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~----~~~~~~f~~~yl~~~gg~~~~~ 244 (400)
T PF03825_consen 169 SLLLAGFALFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGIS----HAAYYTFFSIYLQELGGYSGST 244 (400)
T ss_pred HHHHHHHHHhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcccchhhH
Confidence 00 0001110000 1 111112334688888887766666555543 3334445555566666 4433
Q ss_pred --HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhH-HHHHHHHHHHHHHhhccc
Q 014286 263 --LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLY-LSVGGMLMFVLTFALGAG 339 (427)
Q Consensus 263 --~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 339 (427)
....+..+..++.-...+++.+|+|.++++.++.+..++=..++....... ...+ .......+.+..++....
T Consensus 245 ~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~----~~~~~~~~l~q~lhG~tf~~~~~ 320 (400)
T PF03825_consen 245 IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPW----PFIVALQLLGQLLHGLTFGLFHA 320 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCc----HHHHHHHHHHHhhhhHHHHHHHH
Confidence 344455677778888999999999999999999999888887777652110 0001 111112345655555544
Q ss_pred chhhhhccCcCCccchhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhccch------hHHHHHHHHHHHHHHHHHhccC
Q 014286 340 PVPSLLLPEIFPSRIRAKAMAVCMSV-HWVINFFVGLLFLRLLEQLGPQL------LYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
.... ++.+..|++.|++++++++.. ..+|..+|..+.|++.|+.|.+. .+.+.+++.++..++...+.||
T Consensus 321 a~~~-yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 321 ASVR-YIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHH-HHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4545 999999999999999998876 46899999999999999988554 3444444444444444444443
No 91
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.84 E-value=1.1e-19 Score=170.48 Aligned_cols=301 Identities=16% Similarity=0.090 Sum_probs=177.1
Q ss_pred hhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc----cchhH-HHHHhhHHHHHHHHHHHhhhh------h
Q 014286 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRR-AFQLCALPMIIGASISATTRN------L 141 (427)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~ 141 (427)
..+.+.+++|++.... |++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++...++ +
T Consensus 22 l~~~~~~~~g~s~~~~--g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFV--GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCCCHHHH--HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 3456677889866655 999999999999999999999998 68744 577888888888888877654 4
Q ss_pred HHHHHHHHHHhhhccccccceeecccCCchhhhhcCCh---HHHH----HHH-----HHH---hCC--C--chhh-----
Q 014286 142 IGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRT---AEAE----AEF-----EKL---LGG--S--HVKS----- 197 (427)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~---~~~~----~~~-----~~~---~~~--~--~~~~----- 197 (427)
..+++.+++.+++.+...+...++.+|-..-...+.+. .... ..+ ..+ .+. . ..+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56777888888887765555445544411000000000 0000 000 000 000 0 0000
Q ss_pred -------------HHHHHhhhhcCCCCC----cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHh-cCC
Q 014286 198 -------------SLAELSKLDRGDDGD----IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS-AGL 259 (427)
Q Consensus 198 -------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 259 (427)
..++.++..+.++++ ...++++++++.++...+..++....... ...+.+++.+. .+.
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 255 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNI----KNGVQVYYFTYVLGD 255 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH----HcchhheeEeeecCC
Confidence 000000000011011 22345666777666555544443332221 11122222221 221
Q ss_pred Ch--hHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhc
Q 014286 260 SS--GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALG 337 (427)
Q Consensus 260 ~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (427)
+. ........++.+++.++.++++||+|+|+.+..+..+.+++.+.+.+.. ...+...+...+.+.+.+..
T Consensus 256 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 328 (437)
T TIGR00792 256 PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-------SNLPLILVLIILAGFGQNFV 328 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-------hhHHHHHHHHHHHHHHHHHH
Confidence 11 1344556788889999999999999999999888877777666554321 11222333333333433332
Q ss_pred ccchhhhhccCcCC-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 014286 338 AGPVPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQ 387 (427)
Q Consensus 338 ~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 387 (427)
.+...++.+|..+ ++.+|.+.|+.+....+|..+++.+.|.+.+..|+.
T Consensus 329 -~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 329 -TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred -HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3455557777654 456899999999999999999999999999988763
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.82 E-value=3.9e-18 Score=160.07 Aligned_cols=352 Identities=13% Similarity=0.058 Sum_probs=201.0
Q ss_pred HHHHhhhhhccccccccchhhhhhh-c--cCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc-cchhHHHHHhhHHHHH
Q 014286 55 VATLSSFLFGYHLGVVNEPLESISL-D--LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMII 130 (427)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~-~--~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~ 130 (427)
.+.+..+.+.+......+.+|.+.+ + +|++..+. |++.+.+.++..++++++|+++|| +|||+++.++.+++++
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~a--g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQA--FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 3334445555555555667776644 4 78765555 999999999999999999999999 8999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCC------ch------h------------------hhhcCChH
Q 014286 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTES------PH------W------------------LYKKGRTA 180 (427)
Q Consensus 131 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~------~~------~------------------~~~~~~~~ 180 (427)
+.++.+++++++.++++|++.|+|.|...+...+++.+. ++ + +.....+.
T Consensus 92 g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~ 171 (475)
T TIGR00924 92 GHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYH 171 (475)
T ss_pred HHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 999999999999999999999999998888777766531 00 0 00000000
Q ss_pred HHHHHHH--HHhCCC---chhhHHHHHhhhhcC-CCCCcchhH-------------------------------------
Q 014286 181 EAEAEFE--KLLGGS---HVKSSLAELSKLDRG-DDGDIVKFE------------------------------------- 217 (427)
Q Consensus 181 ~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~------------------------------------- 217 (427)
....... ...... ......++.+++++. +++++...+
T Consensus 172 ~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (475)
T TIGR00924 172 VGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVI 251 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 0000000 000000 000000000000000 000000000
Q ss_pred ----hhhccc-------chhHHHHHHHHHHhhhccchhHHHHhHHHHH-Hhc-------CCChhHHHHHHHHHHHHHHHh
Q 014286 218 ----ELLYGR-------HFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSA-------GLSSGLANVFVGIANLLGSVV 278 (427)
Q Consensus 218 ----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------g~~~~~~~~~~~~~~~~~~~~ 278 (427)
+..+++ .....++..++.....+..+.-.....+.+. ++. +.+++....+..+..++..++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~ 331 (475)
T TIGR00924 252 IFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPV 331 (475)
T ss_pred HHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHH
Confidence 000000 0001111112211111112222222222222 211 122445666666666666655
Q ss_pred Hh----hhhcc-cCccchh--hhhhHHHHHHHHHHHHHhhcCC-CCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcC
Q 014286 279 AM----VLMDK-LGRKALL--QWSFFSMAVSMAIQVAASSSYI-PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIF 350 (427)
Q Consensus 279 ~g----~l~d~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (427)
.. ++.|| .+.+... .+|.++.++++..+.+...... ....+.++.+....+.+.+... ..|...++..+..
T Consensus 332 ~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~-~~p~~~~~~~~~a 410 (475)
T TIGR00924 332 LAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELM-ISPLGLSWWTKIA 410 (475)
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHH-HhHHHHHHHHHhC
Confidence 44 44444 2233333 5677777777766654322111 1133555566666666665553 4566666999999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 351 PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 351 p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
|++.||+.+|+......+|..+++.+.....+..++...|...++++++..++.++..|
T Consensus 411 P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 411 PQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777777887888887777776666654443
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.81 E-value=7.6e-18 Score=155.33 Aligned_cols=339 Identities=12% Similarity=0.034 Sum_probs=188.5
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHH--HHHHHHHHHHHHHhHH-hhhcccchhHHHHHhhHHH-
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLV--VSMCLGGAFIGSTLSG-WIADGVGRRRAFQLCALPM- 128 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~--~s~~~l~~~~~~~~~G-~l~dr~Grr~~l~~~~~~~- 128 (427)
...++..++..+...+...|.+|.+.+|.|.+.++. |++ .+...+...+.+++++ +..||+||||..++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~i--Gl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTAL--AFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 455666778889998999999999999999876666 886 4666778888888884 4799999999976665332
Q ss_pred HHHHHHHH-h--hhh-hHHHHHHHHHHhhhccccccceeecccCCchhhhhcCC-h----HHHHHHHHHHhCC-------
Q 014286 129 IIGASISA-T--TRN-LIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGR-T----AEAEAEFEKLLGG------- 192 (427)
Q Consensus 129 ~~~~~~~~-~--~~~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~-~----~~~~~~~~~~~~~------- 192 (427)
++.....+ + ..+ ..+++..-++.++..+...+....+..|..+ .++. . ......+....+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~---~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~ 157 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFN---GRTLAKGNAVQIAGVMIGFFGGGAGTLVLF 157 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222 1 222 3334444455555555555544444333110 0000 0 0000000110000
Q ss_pred ---Cch-----------h-h-HHHHHhhhh----cCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHH
Q 014286 193 ---SHV-----------K-S-SLAELSKLD----RGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSS 252 (427)
Q Consensus 193 ---~~~-----------~-~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
.+. . . ......+++ +.++++..++++.+|++..+......++...... ....+.+.
T Consensus 158 ~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~----~~~~~~~~ 233 (390)
T TIGR02718 158 GKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAPLARRASLFRFFRRPLAWSLLALALLSAMTAV----SGFGLSKL 233 (390)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccchhhHHHHHHHHcCcCHHHHHHHHHHHHHHHH----HHHHHhhH
Confidence 000 0 0 000000110 0011122345678888877665555544443222 22223444
Q ss_pred HHHhcCCChhHHHHHH---H-HHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 014286 253 VFKSAGLSSGLANVFV---G-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 328 (427)
Q Consensus 253 ~~~~~g~~~~~~~~~~---~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
+.++.|.+........ + ...+++.++.|++.||+|+|+.+..+..+.++............. ............
T Consensus 234 ~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 311 (390)
T TIGR02718 234 YLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWL--APGIAVAWSCSA 311 (390)
T ss_pred HHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc--CCcHHHHHHHHH
Confidence 5556788887433332 2 355667889999999999999888776655333322222111110 011111122222
Q ss_pred HHHHHHhhcccchhhhhccCcCCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 014286 329 MFVLTFALGAGPVPSLLLPEIFPS-RIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAF 403 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 403 (427)
+.....+........ ...+..++ +.+++..++.+...++|..++|.+.|.+.|..|+...|...+++.+++.++
T Consensus 312 ~~~~~~g~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 312 FGSLITGITSVAIYT-AFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 222222322222333 44444554 789999999999999999999999999999999988888877766665443
No 94
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.81 E-value=1.5e-18 Score=162.98 Aligned_cols=344 Identities=12% Similarity=0.100 Sum_probs=191.4
Q ss_pred HHhhhhhccccccccch-hhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc-cchhHHHHHhhHHHHHHHHH
Q 014286 57 TLSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASI 134 (427)
Q Consensus 57 ~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~ 134 (427)
++..+...+......+. ...+.+++|++.++. +++.+.+.....+..++.|+++|| +||||+++.+.+++++++++
T Consensus 20 ~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a--~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~ 97 (489)
T PRK10207 20 FFVELWERFGYYGVQGILAVFFVKQLGFSQEQA--FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFM 97 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 33333343443333333 446677899876666 799999998888889999999999 99999999999999999999
Q ss_pred HHhhhhhHH-HHHHHHHHhhhccccccceeecccCCchhhhhcCC--hHHHHHH------HHHHhC--------C--Cc-
Q 014286 135 SATTRNLIG-MLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGR--TAEAEAE------FEKLLG--------G--SH- 194 (427)
Q Consensus 135 ~~~~~~~~~-l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~------~~~~~~--------~--~~- 194 (427)
++++++... ++++|+++|+|.|...+...+++.| .+..++ ...+... +....+ . .+
T Consensus 98 ~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~----~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~ 173 (489)
T PRK10207 98 TGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSK----CYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYS 173 (489)
T ss_pred HHHhccchhHHHHHHHHHHhccccccCCHHHHHHH----hcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChH
Confidence 999877554 5589999999999998888887775 111111 0100000 000000 0 00
Q ss_pred -------------------hhhHHHHHhhhhcCCCCCcch-----------------------h----------------
Q 014286 195 -------------------VKSSLAELSKLDRGDDGDIVK-----------------------F---------------- 216 (427)
Q Consensus 195 -------------------~~~~~~~~~~~~~~~~~~~~~-----------------------~---------------- 216 (427)
.+...++..+++++++.+... .
T Consensus 174 ~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f 253 (489)
T PRK10207 174 VTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIF 253 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 000000000000000000000 0
Q ss_pred -H------hhhcccchhHHHHH--HHHHHhhhccchhHHHHhHHHHHHh--cCC--ChhHHHHHHHHHHHHHHHhHhhhh
Q 014286 217 -E------ELLYGRHFRVVFIG--STLFALQQLSGINAIFYFSSSVFKS--AGL--SSGLANVFVGIANLLGSVVAMVLM 283 (427)
Q Consensus 217 -~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~g~l~ 283 (427)
. +.+|+|.+....+. ..+............+.+.+...++ .|. .+........+..++..++.+++.
T Consensus 254 ~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~ 333 (489)
T PRK10207 254 FREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIY 333 (489)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHH
Confidence 0 11111111111100 1111111111112222222211111 122 222444445566667788889999
Q ss_pred cccCccch-------hhhhhHHHHHHHHHHHHHhh--cCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccc
Q 014286 284 DKLGRKAL-------LQWSFFSMAVSMAIQVAASS--SYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRI 354 (427)
Q Consensus 284 d~~g~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 354 (427)
||+++|+. +.++.++.+++++.+..... ...+...+.++.+....+.+.+.... .|....++.+..|++.
T Consensus 334 ~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~-~~~g~~~~~~~aP~~~ 412 (489)
T PRK10207 334 THLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFI-SALGLAMIAALVPQHL 412 (489)
T ss_pred HHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHH-hHHHHHHHHHhChHHH
Confidence 99998863 66777777777654432211 11112234455555566666666544 4444447788889999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH----------HhccchhHHHHHHHHHHHHHHHHHh
Q 014286 355 RAKAMAVCMSVHWVINFFVGLLFLRLLE----------QLGPQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 355 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
+|.++|+.+....+|+.++..+...... ...+...|...++..++..++.+..
T Consensus 413 ~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~ 475 (489)
T PRK10207 413 MGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALM 475 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888765421 1124566766776666655555443
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.77 E-value=6.4e-18 Score=163.05 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=100.6
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
++..++..+......+..++.++.++++|+++.++. |++.+.+.++++++.++.|+++||+|||+.+.++++++++++
T Consensus 35 ~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~--G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 35 SLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSS--GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcc--eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 344455666666777888999999999999987777 999999999999999999999999999999999999999999
Q ss_pred HHHHhhh---------------------------------------------------hhHHHHHHHHHHhhhccccccc
Q 014286 133 SISATTR---------------------------------------------------NLIGMLLGRFVVGTGMGLGPTV 161 (427)
Q Consensus 133 ~~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~~~ 161 (427)
+++++.+ .+..++++|+++|+|.+..++.
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~ 192 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPL 192 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhc
Confidence 9998864 2456789999999999999999
Q ss_pred eeecccC
Q 014286 162 AALYVTE 168 (427)
Q Consensus 162 ~~~~i~~ 168 (427)
+.+++.|
T Consensus 193 ~~~~i~d 199 (633)
T TIGR00805 193 GISYIDD 199 (633)
T ss_pred Cchhhhc
Confidence 9999886
No 96
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.77 E-value=1.2e-18 Score=155.27 Aligned_cols=340 Identities=16% Similarity=0.135 Sum_probs=191.8
Q ss_pred hhhhccccccccchhhhhhhc-cCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHH--HHHH-HH
Q 014286 60 SFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI--IGAS-IS 135 (427)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~--~~~~-~~ 135 (427)
.+...+..+...|..|...++ .|++.++. |.+.++..+...+.+|+.|.++||+|.||-++..+.+.. .+.. ..
T Consensus 16 ~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~i--G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~ 93 (412)
T PF01306_consen 16 YFFYFFIWGIFLPFFPIWLTQVAGLSGTEI--GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIY 93 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccccCCCHHHH--HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 333344456667777766654 78876666 999999999999999999999999997665544332221 1222 11
Q ss_pred Hhh----hhhH-HHHHHHHHHhhhccccccceeecccCCchh----hhhcCChHHHHHHHH-----HHhCCCc-------
Q 014286 136 ATT----RNLI-GMLLGRFVVGTGMGLGPTVAALYVTESPHW----LYKKGRTAEAEAEFE-----KLLGGSH------- 194 (427)
Q Consensus 136 ~~~----~~~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~-----~~~~~~~------- 194 (427)
.+. .|++ ..+++-+..|+......++..+++.+..|- +.+.+.+....-... .+...+.
T Consensus 94 v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~ 173 (412)
T PF01306_consen 94 VFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIA 173 (412)
T ss_dssp THHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHH
Confidence 222 2322 233333334444444445444444421110 000000000000000 0000000
Q ss_pred -----hh-----hHHHHHhh-----hhcCCCCCcch---hHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHh
Q 014286 195 -----VK-----SSLAELSK-----LDRGDDGDIVK---FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS 256 (427)
Q Consensus 195 -----~~-----~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
.. ...++.++ +.+..++++.+ ..+++|+|++|.+.+....... .+.......+.+...
T Consensus 174 s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~----~Y~vfdqqf~~y~~~ 249 (412)
T PF01306_consen 174 SAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAA----IYDVFDQQFPIYFAS 249 (412)
T ss_dssp HHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 00 00000000 00011112222 3466777777765554333322 233332223333333
Q ss_pred cCCCh----h---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHH
Q 014286 257 AGLSS----G---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLM 329 (427)
Q Consensus 257 ~g~~~----~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (427)
+--+. . .......+..++.-.+..++.+|+|.|+.++++..++.+=....++..+ ++.....-.+
T Consensus 250 ~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~--------~~~i~~~klL 321 (412)
T PF01306_consen 250 FFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN--------PWVISLIKLL 321 (412)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S--------HHHHHHHHHH
T ss_pred HhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc--------hHHHHHHHHH
Confidence 32222 2 3455555677788888999999999999999999999888888776543 2445555556
Q ss_pred HHHHHhhcccchhhhhccCcCCccchhhHHHHH-HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhc
Q 014286 330 FVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVC-MSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNV 408 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 408 (427)
-+.-+.....+... |+++.+|++..++...+. +...+++.++.+.+.|.++|+.|++..|++.+.+.+...++..+.+
T Consensus 322 H~~e~~l~lva~fk-YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 322 HALEFPLLLVAAFK-YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHH-HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHH-HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 66666655566666 999999999989999885 6778899999999999999999999999999998888888887777
Q ss_pred cCCCCC
Q 014286 409 VETKGK 414 (427)
Q Consensus 409 ~~~~~~ 414 (427)
++.++.
T Consensus 401 ~~~~~~ 406 (412)
T PF01306_consen 401 KKDKKQ 406 (412)
T ss_dssp --SSST
T ss_pred cCCCcc
Confidence 655543
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.77 E-value=7.9e-17 Score=151.38 Aligned_cols=323 Identities=13% Similarity=0.067 Sum_probs=192.5
Q ss_pred cchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhh------hhhHHH
Q 014286 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------RNLIGM 144 (427)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l 144 (427)
+...|.+++++|++.++. +++.++. .....++++.|+++||+|||+++.++.+++++++++++++ ++++.+
T Consensus 47 sv~s~~L~~~lgls~~~l--~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l 123 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDL--STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRL 123 (591)
T ss_pred HHHHHHHHHHhCcCHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence 456788999999876655 8887763 4456778889999999999999999999999999999997 689999
Q ss_pred HHHHHHHhhhccccccceeeccc---------------------------------------------------------
Q 014286 145 LLGRFVVGTGMGLGPTVAALYVT--------------------------------------------------------- 167 (427)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~--------------------------------------------------------- 167 (427)
.+.|+++|+|.+...+.+...+.
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998755544433322
Q ss_pred -----CCchhhhhcCChHHHHHHHHHH--------------------------------------hCCC-----------
Q 014286 168 -----ESPHWLYKKGRTAEAEAEFEKL--------------------------------------LGGS----------- 193 (427)
Q Consensus 168 -----~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~----------- 193 (427)
+.++|....++..+........ ....
T Consensus 204 ~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~ 283 (591)
T PTZ00207 204 FMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTV 283 (591)
T ss_pred heeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 2222221111101111100000 0000
Q ss_pred -------c-hhhHHHHHh-----------h------------hh--------c-CCCCCcchhHhhhcccchhHHHHHHH
Q 014286 194 -------H-VKSSLAELS-----------K------------LD--------R-GDDGDIVKFEELLYGRHFRVVFIGST 233 (427)
Q Consensus 194 -------~-~~~~~~~~~-----------~------------~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (427)
. ...+.+... + .+ + ...+...++++.+++..+|.+++..+
T Consensus 284 ~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~ 363 (591)
T PTZ00207 284 IVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIF 363 (591)
T ss_pred HHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHH
Confidence 0 000000000 0 00 0 00011125667777778887777766
Q ss_pred HHHhhhccchhHHHHhHHHHHHhc-CCC--h--h-HHHHHHHHHHHHHHHhHhhhhcccCcc--------ch-hhhhhHH
Q 014286 234 LFALQQLSGINAIFYFSSSVFKSA-GLS--S--G-LANVFVGIANLLGSVVAMVLMDKLGRK--------AL-LQWSFFS 298 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~--~--~-~~~~~~~~~~~~~~~~~g~l~d~~g~~--------~~-~~~~~~~ 298 (427)
+........ .+.+.++.+.. |.+ . . ....+.++++.+|++..|.+.....+| .. +.+..+
T Consensus 364 cg~g~gl~~----~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~- 438 (591)
T PTZ00207 364 CCVGAHFVI----IFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV- 438 (591)
T ss_pred HhhCchhee----eecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-
Confidence 665543332 23344555555 552 2 1 256888999999999999887222111 11 222222
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHH-HHHH
Q 014286 299 MAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFV-GLLF 377 (427)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~-~~~~ 377 (427)
+.++.+++..... . -.+.+..++.+++.+..+. +....++|+|. ++-|+-.-+.....-+|+.+- -.++
T Consensus 439 ~~~~~lll~~~~p-----~---~~L~~~~~lvg~~~G~~~~-~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~ 508 (591)
T PTZ00207 439 CIITMLTLFLTLP-----K---AALPLPYFIAAFANGFMAA-TIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLY 508 (591)
T ss_pred HHHHHHHHHHHCC-----c---cHhHHHHHHHHHHhhHhHH-HHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHH
Confidence 3444444333321 0 1344555555666654444 44448999999 888887777777666776665 5677
Q ss_pred HHHHHHhc-------------cchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 378 LRLLEQLG-------------PQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 378 g~l~~~~g-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
|.++|.-. ++.+|++.+++++++.++......++
T Consensus 509 G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 509 GEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred HHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 88887532 67799999999988887765544443
No 98
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.75 E-value=6.2e-17 Score=147.47 Aligned_cols=291 Identities=15% Similarity=0.062 Sum_probs=165.4
Q ss_pred cccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc-----chhHHH-HHhhHHHHHHHHHHHhh--
Q 014286 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRAF-QLCALPMIIGASISATT-- 138 (427)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~-----Grr~~l-~~~~~~~~~~~~~~~~~-- 138 (427)
....++.+|.+.+|+|+|.++. |+..+. .+...+ .+++|+++||+ ||||.+ +.+.++.++...+.++.
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~--g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTI--GFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHH--HHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 3556788999999999877765 888655 455555 99999999998 899974 67778888887777777
Q ss_pred -hhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH------HHH------------HhCCC------
Q 014286 139 -RNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE------FEK------------LLGGS------ 193 (427)
Q Consensus 139 -~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~------------~~~~~------ 193 (427)
.+++.+....++.|++.+...+...++++|. ..++++..+... +.. ..+..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~ 155 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEI----LSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITL 155 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 4666777788888888877777777777652 111111111100 000 00000
Q ss_pred ch-----------hhHHH-H--HhhhhcCC--C-C----CcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHH
Q 014286 194 HV-----------KSSLA-E--LSKLDRGD--D-G----DIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSS 252 (427)
Q Consensus 194 ~~-----------~~~~~-~--~~~~~~~~--~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
+. ..... . .++.++.+ + + .+..++++++++..+..........+... .......+.+.
T Consensus 156 wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 234 (356)
T TIGR00901 156 WGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKL-GDSAATVLTTL 234 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 00 00000 0 01110000 0 0 01234555666552222222222222222 22233334444
Q ss_pred HHHhcCCChhHH---HHHHH-HHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCC-C--CCchhHHHHH
Q 014286 253 VFKSAGLSSGLA---NVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI-P--GSASLYLSVG 325 (427)
Q Consensus 253 ~~~~~g~~~~~~---~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~ 325 (427)
+.++.|.+.... ....+ +..+++.++++++.||+|+|+.+..+.++.+++...+.+...... . +....+....
T Consensus 235 ~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (356)
T TIGR00901 235 FLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFL 314 (356)
T ss_pred HHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Confidence 545578877743 22233 456788999999999999999888888777766655444321100 0 0012233333
Q ss_pred HHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHH
Q 014286 326 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHW 367 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 367 (427)
+.++..++.+. ..+...++..|.+|+++||+..|+.+...+
T Consensus 315 ~~~l~~~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 315 TITLEAVTGGL-GTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHhHH-HHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 33333443333 344555699999999999999999887654
No 99
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.75 E-value=7e-17 Score=144.86 Aligned_cols=334 Identities=13% Similarity=0.073 Sum_probs=194.5
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
.+.+|+-.|+.- .+...+.+.|.+.+|+|++.++. .|.+.++++.++++++++.|.++||+|.|+++.++.+.+++.+
T Consensus 29 ~~~lC~fGF~~e-~R~n~s~a~p~L~~elglT~~qv-~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 29 VLYLCFYGFMAQ-FRPGESFITPYLLTVLNFTEETV-TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHHH-hhchHHHHHHHHHHHcCCCHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 444444444443 34566778899999999987772 3999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHH---------------------------
Q 014286 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAE--------------------------- 185 (427)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------------------------- 185 (427)
++.++++++..+.+.|++.|++.|..+ ....++.. |+.. +++..+...
T Consensus 107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~---WfP~-kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y 181 (511)
T TIGR00806 107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFS---LVPP-SRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISY 181 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH---HCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhH
Confidence 999999999999999999999999998 66666663 1111 111100000
Q ss_pred ------------HHHHh--CCCchhhHHH-------------HHhhhhcCCC--C---Cc----c-------hhHhhhcc
Q 014286 186 ------------FEKLL--GGSHVKSSLA-------------ELSKLDRGDD--G---DI----V-------KFEELLYG 222 (427)
Q Consensus 186 ------------~~~~~--~~~~~~~~~~-------------~~~~~~~~~~--~---~~----~-------~~~~~~~~ 222 (427)
+..+. ..+..+...- +.+...+++. . .+ . .+++..++
T Consensus 182 ~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n 261 (511)
T TIGR00806 182 STLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRN 261 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcC
Confidence 00000 0000000000 0000000000 0 00 0 11122333
Q ss_pred cchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCC----hhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHH
Q 014286 223 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS----SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 298 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 298 (427)
+.. +-..++.....+++.-+.+|.+.+-++..-+ .+..-++..+.+.+.++..|++-.++.+..-+.++.+.
T Consensus 262 ~~v----l~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s 337 (511)
T TIGR00806 262 PQL----LLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVS 337 (511)
T ss_pred cch----hhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHH
Confidence 322 2233333444446667777777776554221 12455566667777888889986666443333333333
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHH-
Q 014286 299 MAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF- 377 (427)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~- 377 (427)
..-+.+++... ...+.|...+..+++...+.+...-... -++.....+.-|...|+.+++..+-..+-..+.
T Consensus 338 ~~~~gll~~m~------~t~~Iw~~Y~~yvlf~~~y~flitia~~-~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVv 410 (511)
T TIGR00806 338 AIQAGLVFWMS------QSHDIWVLYVTYVLFRGIYQFLVPIATF-QIASSLSKELCALVFGINTFVATALKTIITAVVS 410 (511)
T ss_pred HHHHHHhhhhh------cccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcccceEEEEecHHHHHHHHHHheEEEEE
Confidence 32222222211 2345677777777777777654433333 445545656679999998888776665555443
Q ss_pred ---HHHHHH---h-ccchhHHHHHHHHHHHHHHH
Q 014286 378 ---LRLLEQ---L-GPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 378 ---g~l~~~---~-g~~~~~~~~~~~~~~~~~~~ 404 (427)
|.-.+. + =|...|.+++++.++..++.
T Consensus 411 d~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~~~ 444 (511)
T TIGR00806 411 DKRGLGLQVRKQFRIYSVYFLVLSIICFFGAGLD 444 (511)
T ss_pred cccccCCCceeEEEehhhHHHHHHHHHHHHHHHH
Confidence 110111 1 14445666666665554443
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.74 E-value=1.5e-16 Score=150.31 Aligned_cols=97 Identities=18% Similarity=0.256 Sum_probs=77.1
Q ss_pred ccchhh-hhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc-cchhHHHHHhhHHHHHHHHHHHhhh-hhHHHHH
Q 014286 70 VNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTR-NLIGMLL 146 (427)
Q Consensus 70 ~~~~~~-~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~ 146 (427)
..+.++ .+.+++|++.++. +++.+.+........+++|+++|| +|||++++.+.++++++.+++++++ +.+.+.+
T Consensus 40 ~~~~l~~yl~~~lg~s~~~a--~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~ 117 (500)
T PRK09584 40 LQGIMAVYLVKQLGMSEADS--ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYM 117 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 334444 5568899876655 677777776666667899999999 5999999999999999999999874 5667788
Q ss_pred HHHHHhhhccccccceeecccC
Q 014286 147 GRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
+|+++|+|.|...+...+++.|
T Consensus 118 ~~~l~gig~g~~~~~~~~l~~~ 139 (500)
T PRK09584 118 GMATIAVGNGLFKANPSSLLST 139 (500)
T ss_pred HHHHHHHhhhcccCCHHHHHHH
Confidence 9999999999887777666664
No 101
>PRK09848 glucuronide transporter; Provisional
Probab=99.72 E-value=1.5e-16 Score=149.35 Aligned_cols=299 Identities=11% Similarity=0.025 Sum_probs=165.4
Q ss_pred hhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc----chhHHH-HHhhHHHHHHHHHHH-hh----h--hhH
Q 014286 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV----GRRRAF-QLCALPMIIGASISA-TT----R--NLI 142 (427)
Q Consensus 75 ~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~----Grr~~l-~~~~~~~~~~~~~~~-~~----~--~~~ 142 (427)
+.+.+.+|++..+. |.+.+...+..++..+++|.++||. ||||.. ..+.+...+.+++.. .. + ...
T Consensus 33 ~y~~~~~gl~~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 33 SYYTDVAGVGAAAA--GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHcCCCHHHH--HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 45666778765544 9999999999999999999999996 777755 555555554444432 21 1 123
Q ss_pred HHHHHHHHHhhhccccccceeecccCCchhhhhcCCh---HHH---H--HH--------HHHHhCCCchh----h-----
Q 014286 143 GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRT---AEA---E--AE--------FEKLLGGSHVK----S----- 197 (427)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~---~~~---~--~~--------~~~~~~~~~~~----~----- 197 (427)
..++.-++.+++.+...+...++..+-.+-...+.+. ... . .. +....+..... .
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~ 190 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLA 190 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 3444556667776666554444333210000000000 000 0 00 00000000000 0
Q ss_pred ---------HHHHHhhhhcCCC---CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHH-hcCCChh--
Q 014286 198 ---------SLAELSKLDRGDD---GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLSSG-- 262 (427)
Q Consensus 198 ---------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-- 262 (427)
.....++..+++. ..+..++.+++++.+....+..++......... ...+++.+ ..|.+..
T Consensus 191 v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~ 266 (448)
T PRK09848 191 IAGMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVS----ASSLFYVRYVLNDTGLFT 266 (448)
T ss_pred HHHHHHHHHHHcCcEeccCCCccCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHh----hhheeeEeeecCChHHHH
Confidence 0000011111111 112335668888887766555555444322222 22333322 2344333
Q ss_pred -HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 263 -LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 263 -~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
.......++.+++.++.+++.||+|+|+.+..+..+..++.+.+.+.. ....+.......+.+.+.+... +.
T Consensus 267 ~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~------~~~~~~~~~~~~l~g~G~~~~~-~~ 339 (448)
T PRK09848 267 VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVS------VWSLPVALVALAIASIGQGVTM-TV 339 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC------chhHHHHHHHHHHHHHHHHHHH-HH
Confidence 222223455677888999999999999999998887777766554321 1222333333444444444333 44
Q ss_pred hhhhccCcCCcc-------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 014286 342 PSLLLPEIFPSR-------IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 386 (427)
Q Consensus 342 ~~~~~~~~~p~~-------~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 386 (427)
..++.+|..|.+ .+|...|+.+....+|..+++.+.+.+.+..||
T Consensus 340 ~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 340 MWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 455777776543 469999999999999999999999999887775
No 102
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.71 E-value=3.1e-16 Score=134.27 Aligned_cols=286 Identities=17% Similarity=0.144 Sum_probs=154.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeeccc
Q 014286 88 LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (427)
Q Consensus 88 ~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 167 (427)
.-.|.+.|.|.++..+.++.||.++||||||++++++++..+++.++.+++.||..+++.|++.|+..|-..+ ..+++.
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v-~rAiis 146 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSV-IRAIIS 146 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHH-HHHHHH
Confidence 3359999999999999999999999999999999999999999999999999997777779999998874433 333444
Q ss_pred CC--ch-------------------------hhh----hcCChHHHH-HHHHHHhCCC-------chhhHHHHHhhhhcC
Q 014286 168 ES--PH-------------------------WLY----KKGRTAEAE-AEFEKLLGGS-------HVKSSLAELSKLDRG 208 (427)
Q Consensus 168 ~~--~~-------------------------~~~----~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~ 208 (427)
|- ++ ++. ..++...+. ..+..+.... ..++.++..++.++.
T Consensus 147 dV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~ 226 (451)
T KOG2615|consen 147 DVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEH 226 (451)
T ss_pred hhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccc
Confidence 21 00 011 111111111 1111100000 001111110000000
Q ss_pred --------CCCCcchhH-----hhhcccchhHHHHHHHHHHhhhcc---chhHHHHhHHHH-HHhcCCChhH---HHHHH
Q 014286 209 --------DDGDIVKFE-----ELLYGRHFRVVFIGSTLFALQQLS---GINAIFYFSSSV-FKSAGLSSGL---ANVFV 268 (427)
Q Consensus 209 --------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~g~~~~~---~~~~~ 268 (427)
.+.+..+.. ..++++................+. .+....++...+ .+.+|+++.. +....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~t 306 (451)
T KOG2615|consen 227 STLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTT 306 (451)
T ss_pred cchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehh
Confidence 000000111 123333333222222222222221 222222222222 2556777663 44444
Q ss_pred HHHHHHHHHhHhhhhcccC--ccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhc
Q 014286 269 GIANLLGSVVAMVLMDKLG--RKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLL 346 (427)
Q Consensus 269 ~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (427)
++.+.+......+..||.+ .+..+..+..++.-.++++..... +........+..+... ...+....++
T Consensus 307 Gl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~--------~~~l~~~s~l~sf~~A-~~vt~Lt~Lv 377 (451)
T KOG2615|consen 307 GLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLART--------PVVLYLGSTLKSFSTA-SVVTCLTSLV 377 (451)
T ss_pred hHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcccc--------chhhhHHHHHHHHHHH-HhhHHHHHHH
Confidence 5555554444455555544 333444444443333333332221 1223333333333333 3344455588
Q ss_pred cCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 347 PEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 383 (427)
Q Consensus 347 ~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 383 (427)
....|+++||++.|+..+.+.++-++||.+.|.+...
T Consensus 378 ~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 378 HKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 8899999999999999999999999999999877653
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.69 E-value=6.7e-16 Score=144.72 Aligned_cols=301 Identities=13% Similarity=0.107 Sum_probs=168.8
Q ss_pred hhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc----cchh-HHHHHhhHHHHHHHHHHHhhhh------h
Q 014286 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRR-RAFQLCALPMIIGASISATTRN------L 141 (427)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~ 141 (427)
+.+.+.+++|++.... |.+.++..+..++..|+.|.++|| +||| +.++.+.+..+++.++....++ +
T Consensus 32 l~~~~t~~~gls~~~~--g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 32 LAYFYTDVFGLSAAIM--GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHhcCCCHHHH--HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 3456777889876655 999999999999999999999999 7875 5556777777777766555543 4
Q ss_pred HHHHHHHHHHhhhccccccceeecccCCchhhhhcCCh---HHHHHHH----H--------HHhCCCchhhH--------
Q 014286 142 IGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRT---AEAEAEF----E--------KLLGGSHVKSS-------- 198 (427)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~----~--------~~~~~~~~~~~-------- 198 (427)
..+++..++.+.+.......-.++.+|-.+-...+.+. ....... . ...+.......
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~ 189 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVM 189 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 55566666666655544444444544311000000000 0000000 0 00000000000
Q ss_pred ---------HHH--Hhhh--hc--CCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh-
Q 014286 199 ---------LAE--LSKL--DR--GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG- 262 (427)
Q Consensus 199 ---------~~~--~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~- 262 (427)
..- .++. ++ ++.+....++.+++++.++..+...++.............+|..+.. + +..
T Consensus 190 ~ii~~v~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~---~-~~~~ 265 (444)
T PRK09669 190 GLLGVVLFFCCFFMTKERYTPEVDNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVL---L-RPDL 265 (444)
T ss_pred HHHHHHHHHHHhCCeEEecCCCCcCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeec---C-CHHH
Confidence 000 0010 00 01111334667788888777665554443322211222222222222 1 122
Q ss_pred --HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccc
Q 014286 263 --LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 340 (427)
Q Consensus 263 --~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (427)
.......+..+++.++.+++.||+|+|+.+..+..+.++....+.... ..+.+...+...+.+.+.+ ...+
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~g~~~~-~~~~ 338 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP------PSNVWLIFALNILFNFIQN-LTTP 338 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC------cchHHHHHHHHHHHHHHHH-HHHH
Confidence 233344566778888999999999999988877665554333222221 1222333333444444444 3346
Q ss_pred hhhhhccCcCC-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 014286 341 VPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 386 (427)
Q Consensus 341 ~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 386 (427)
..+++++|..+ .+..|...|..+.+..+|..+++.+.|.+.+..|+
T Consensus 339 ~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 339 LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66768888764 23456778999999999999999999999998887
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.67 E-value=3.3e-15 Score=139.96 Aligned_cols=334 Identities=14% Similarity=0.078 Sum_probs=193.8
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccc-----hhHHHHHhhHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQLCALP 127 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~ 127 (427)
..++...++..++.........|.+.+++|++.++. +...+...+...+-.+ +|+++||++ ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i--~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARY--QRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 344555567777763333445567777899877666 7889999999998666 999999998 77877887766
Q ss_pred HH-HHHHHHHhhhhhHHH-HHHHHHHhhhccccccceeecccCCchhhhhcCC---hHH-------HHHHHHHHh-----
Q 014286 128 MI-IGASISATTRNLIGM-LLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGR---TAE-------AEAEFEKLL----- 190 (427)
Q Consensus 128 ~~-~~~~~~~~~~~~~~l-~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~---~~~-------~~~~~~~~~----- 190 (427)
.+ +.....+..++.... .+.+++.+++.+..-+...++..|.-+ ..... ... ....+....
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~--~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR--ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh--cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 63 333333434554444 458899999999888888888877432 11100 000 001110000
Q ss_pred ---CCCch---------hhH--HHHHhhhh---cCCCCC--------------------cchhHhhhcccchhHHHHHHH
Q 014286 191 ---GGSHV---------KSS--LAELSKLD---RGDDGD--------------------IVKFEELLYGRHFRVVFIGST 233 (427)
Q Consensus 191 ---~~~~~---------~~~--~~~~~~~~---~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~ 233 (427)
+.... ... ....++++ ..+..+ ....++.++++..+..++..+
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fif 262 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIF 262 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 00000 000 00001110 000000 011233344454444333333
Q ss_pred H-HHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHH
Q 014286 234 L-FALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 309 (427)
Q Consensus 234 ~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~ 309 (427)
+ +... ..... ..+. ...+..|.++. ......+++.+++..+.+++.+|++.|+.+.++.++.+++.......
T Consensus 263 l~~~~~-~~~~~--~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l 338 (468)
T TIGR00788 263 LSYANL-PGASG--SVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLIL 338 (468)
T ss_pred HHHhhc-CCCCc--eeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceee
Confidence 3 1111 11111 1111 11134677766 45666778888899999999999999999888888877766443211
Q ss_pred hhcCCCC--CchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Q 014286 310 SSSYIPG--SASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-- 385 (427)
Q Consensus 310 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-- 385 (427)
....... ....+.......+...+.+....+... ++.+..|++.+|+..++.+++.++|..+++.++|.+.+..|
T Consensus 339 ~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~-~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~ 417 (468)
T TIGR00788 339 VKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLV-LLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGIT 417 (468)
T ss_pred eeccccccCCCCeeeeeehhHHHHHHHHHHHccHHH-HHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1111000 011223333344555555556666655 88999999999999999999999999999999999999888
Q ss_pred ---cchhHHHHHHH
Q 014286 386 ---PQLLYSIFGTF 396 (427)
Q Consensus 386 ---~~~~~~~~~~~ 396 (427)
++..+....+.
T Consensus 418 ~~~~~~~~~~i~i~ 431 (468)
T TIGR00788 418 CDNSNNLWLLILGH 431 (468)
T ss_pred cccccchHHHHHHH
Confidence 66555544333
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.66 E-value=5.4e-15 Score=139.47 Aligned_cols=313 Identities=13% Similarity=0.109 Sum_probs=167.9
Q ss_pred ccccccccchhh-hhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhc----ccch-hHHHHHhhHHHHHHHHHHHh
Q 014286 64 GYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGR-RRAFQLCALPMIIGASISAT 137 (427)
Q Consensus 64 ~~~~~~~~~~~~-~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~ 137 (427)
.+..+.+.+.++ .+.+.+|++.... |.+..+.-+.-++..|++|.++| |+|| |+.++.+.+..+++..++-.
T Consensus 19 ~~~~~~~~~~l~~yyt~v~Gls~~~v--g~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~ 96 (473)
T PRK10429 19 DFAIGIVYMYLMYYYTDVVGLSVGLV--GTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFS 96 (473)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHc
Confidence 333344444444 4555668765544 99999999999999999999999 6698 55567788887777666644
Q ss_pred hhh------hHHHHHHHHHHhhhccccccceeecccCCchhhhhcCC---h----HHHHHHHH----H-H---hCCCchh
Q 014286 138 TRN------LIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGR---T----AEAEAEFE----K-L---LGGSHVK 196 (427)
Q Consensus 138 ~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~---~----~~~~~~~~----~-~---~~~~~~~ 196 (427)
.++ +..+++.-++.+++.....+.-.++.+|-.+-...+.+ . ......+. . + .+.....
T Consensus 97 ~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~ 176 (473)
T PRK10429 97 AHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRG 176 (473)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 332 33455556666666655555555555541100000000 0 00000000 0 0 0100000
Q ss_pred h----------------HHHH---Hhhh---h--cCCCCCcchh----HhhhcccchhHHHHHHHHHHhhhccchhHHHH
Q 014286 197 S----------------SLAE---LSKL---D--RGDDGDIVKF----EELLYGRHFRVVFIGSTLFALQQLSGINAIFY 248 (427)
Q Consensus 197 ~----------------~~~~---~~~~---~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
. .... .++. + +.+++++.++ +.+++++.++..+...++.... ......
T Consensus 177 ~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~----~~~~~~ 252 (473)
T PRK10429 177 FGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIA----SNIING 252 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHH----HHHHhh
Confidence 0 0000 0110 0 0011112233 3444565555544444433332 222222
Q ss_pred hHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q 014286 249 FSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 325 (427)
Q Consensus 249 ~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (427)
+.+++.+....+.. .......+..+++.++.+++.||+|+|+.+..+..+..++.+.+...... .....+..++
T Consensus 253 ~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i 329 (473)
T PRK10429 253 FAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA---APHNALLIVI 329 (473)
T ss_pred heeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc---CchhHHHHHH
Confidence 22333332222222 34444557778888999999999999999888777666555444332111 1122233333
Q ss_pred HHHHHHHHHhhcccchhhhhccCcCC-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 014286 326 GMLMFVLTFALGAGPVPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 386 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 386 (427)
...+.+.+.+.. .+...++.+|..+ .+..|...|....+..++..+++.+.|.+.+..||
T Consensus 330 ~~~l~g~~~~~~-~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 330 AGILLNIGTALF-WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 334444444433 3445557888755 34456688999999999999999999999988776
No 106
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.65 E-value=4.3e-14 Score=130.36 Aligned_cols=343 Identities=13% Similarity=0.098 Sum_probs=195.4
Q ss_pred hhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhc----ccchhHHHHHh-hHHHHHHHHHH
Q 014286 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQLC-ALPMIIGASIS 135 (427)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~d----r~Grr~~l~~~-~~~~~~~~~~~ 135 (427)
+-..+......+.++.+.+++|.+.... +++..+..+...+.+++.|.++| |+||||.++++ .....++.++.
T Consensus 14 ~Giq~~~~l~~~~l~~yl~~lg~~~~~~--~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll 91 (477)
T TIGR01301 14 AGVQFGWALQLSLLTPYVQELGIPHAWA--SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI 91 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 3334455566667777888999865444 99999999999999999999999 59999998774 66666777777
Q ss_pred HhhhhhHHH-----------------HHHHHHHhhhccccccceeecccCCchhhhhcCCh--HHHHH----------HH
Q 014286 136 ATTRNLIGM-----------------LLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRT--AEAEA----------EF 186 (427)
Q Consensus 136 ~~~~~~~~l-----------------~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~--~~~~~----------~~ 186 (427)
++++++..+ +++-.+..++.....+...++++|. ...++. ..+.. .+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl----~p~~~~~~~~a~~~~~~~~~lG~il 167 (477)
T TIGR01301 92 GFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADL----TGGDARRTRIANAYFSFFMAIGNVL 167 (477)
T ss_pred HhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cCchhHHHHHHHHHHHHHHHHHHHH
Confidence 777665322 2222233335555555666667762 111110 11111 00
Q ss_pred HHHhCC------------------------------------------CchhhHHH----HH--hhhh-cCCCCCcchhH
Q 014286 187 EKLLGG------------------------------------------SHVKSSLA----EL--SKLD-RGDDGDIVKFE 217 (427)
Q Consensus 187 ~~~~~~------------------------------------------~~~~~~~~----~~--~~~~-~~~~~~~~~~~ 217 (427)
....+. ...++... +. ++.+ .++......++
T Consensus 168 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (477)
T TIGR01301 168 GYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFG 247 (477)
T ss_pred HHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHH
Confidence 000000 00000000 00 0000 00001112234
Q ss_pred hhhcc-----cchhHHHHHHHHHHhhhccchhHHHHhHHHHHH-hcCCC--------hh-----HHHHHHHHHHHHHHHh
Q 014286 218 ELLYG-----RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLS--------SG-----LANVFVGIANLLGSVV 278 (427)
Q Consensus 218 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~--------~~-----~~~~~~~~~~~~~~~~ 278 (427)
+++++ +..+.+.+..++. .++.+....|...++-+ .++.+ .+ +.....++...+.+++
T Consensus 248 ~i~~~~~~mP~~m~~l~~vqffs---W~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~ 324 (477)
T TIGR01301 248 ELFGAFKYLPRPVWILLLVTCLN---WIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIG 324 (477)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHH---HHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44332 2233333332222 22222222222232221 12211 11 3445555666677778
Q ss_pred HhhhhcccCc-cchhhhhhHHHHHHHHHHHHHhhcCCC-------------CCchhHHHHHHHHHHHHHHhhcccchhhh
Q 014286 279 AMVLMDKLGR-KALLQWSFFSMAVSMAIQVAASSSYIP-------------GSASLYLSVGGMLMFVLTFALGAGPVPSL 344 (427)
Q Consensus 279 ~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (427)
..++.+|+|+ |.....+.++.++++....+......+ .....+..++.+...++.++. ...++++
T Consensus 325 l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~-~~siPfa 403 (477)
T TIGR01301 325 MEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAI-TYSIPFA 403 (477)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHH-HHHHhHH
Confidence 8899999985 677788888888888777655431100 000124444555555555543 3566777
Q ss_pred hccCcCCc--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHHHhccCCCC
Q 014286 345 LLPEIFPS--RIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--PQLLYSIFGTFCLMAVAFVKRNVVETKG 413 (427)
Q Consensus 345 ~~~~~~p~--~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (427)
++++..|+ +..|..+|+.|.+..+.+.+.....|.+.+..| ....+.+.++..+++++...+.+|+.+.
T Consensus 404 l~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 404 LASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 88888774 456999999999999999999999898777666 4556767777778888888888887654
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.65 E-value=2.6e-14 Score=133.30 Aligned_cols=305 Identities=16% Similarity=0.141 Sum_probs=196.8
Q ss_pred hhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhc----ccchhHHH-HHhhHHHHHHHHHHHhh-h-------
Q 014286 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAF-QLCALPMIIGASISATT-R------- 139 (427)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~~-~------- 139 (427)
..+.+.+.+|++.... |.+..+..+-.++..|+.|.++| |+||||.. +.+.++.+++.+++... +
T Consensus 24 ~~~f~~~~~gl~~~~~--g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALA--GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHcCCCHHHH--HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 4556667778765554 99999999999999999999999 89977665 56778888888877765 4
Q ss_pred hhHHHHHHHHHHhhhccccccceeecccCCchhhhhcCCh---HHHHHHHHHH------------hCCCch----h----
Q 014286 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRT---AEAEAEFEKL------------LGGSHV----K---- 196 (427)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~------------~~~~~~----~---- 196 (427)
.+..+.+.-++..++.......-.++.+|-.+-...+.+. ......+... .+.... .
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 2334567777778887777766666666522101011110 0000000000 000000 0
Q ss_pred --------------hHHHH---HhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCC
Q 014286 197 --------------SSLAE---LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL 259 (427)
Q Consensus 197 --------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 259 (427)
...+| ..+.++++.+-+..+++++++|.++..+...++.............+|..+..+..+.
T Consensus 182 v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~ 261 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL 261 (428)
T ss_pred HHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh
Confidence 00011 0001111112234567788888888777777776665555555556666655544321
Q ss_pred ChhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhccc
Q 014286 260 SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG 339 (427)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (427)
.+.......+..+++.++.++++||+|+|+.+..+..+.+++.+++.+... .+.+...+...+.+.+.+.. .
T Consensus 262 -~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~l~gi~~~~~-~ 333 (428)
T PF13347_consen 262 -ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP------GSPWLVLILFILAGIGYGAF-F 333 (428)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh------hhHHHHHHHHHHhHhhhccc-c
Confidence 224556677888899999999999999999999999999998888776652 22244455555555555543 3
Q ss_pred chhhhhccCcCC-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 014286 340 PVPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQ 387 (427)
Q Consensus 340 ~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 387 (427)
....++.+|+.+ ++..|...|+.+....++..+++.+.+.+.+..|+.
T Consensus 334 ~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 334 VIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred cccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 555668888776 244689999999999999999999999999887754
No 108
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.64 E-value=2e-13 Score=119.51 Aligned_cols=302 Identities=15% Similarity=0.153 Sum_probs=185.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHH-HHhhHHHHHHHHHHHhhhh--h-HHHHHHHHHHhhhccccccc
Q 014286 86 NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF-QLCALPMIIGASISATTRN--L-IGMLLGRFVVGTGMGLGPTV 161 (427)
Q Consensus 86 ~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~g~~~~~ 161 (427)
++...|...++..+..++-+|+.|.++|+.|+||.. -+...+..+++.+..++++ + +..++.-.+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 344458888999999999999999999999976655 5555566666666666654 4 44566677788888777777
Q ss_pred eeecccCCchhhhhcCCh-------------HHHHH---HHHHHhCC---------------C--ch------------h
Q 014286 162 AALYVTESPHWLYKKGRT-------------AEAEA---EFEKLLGG---------------S--HV------------K 196 (427)
Q Consensus 162 ~~~~i~~~~~~~~~~~~~-------------~~~~~---~~~~~~~~---------------~--~~------------~ 196 (427)
-.+++++ +..+++. ..... .+...... . .. .
T Consensus 136 yds~L~~----~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li 211 (438)
T COG2270 136 YDSMLPR----LTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLL 211 (438)
T ss_pred hhhHhhh----hcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHH
Confidence 7776663 1111000 00000 00000000 0 00 0
Q ss_pred hHHHHHhhhhcCC----C----------CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHH-HHhcCCCh
Q 014286 197 SSLAELSKLDRGD----D----------GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV-FKSAGLSS 261 (427)
Q Consensus 197 ~~~~~~~~~~~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 261 (427)
...+-....++.+ . +-..+++++.++++...++++.+++.- +.+.+......+ ..++|.+.
T Consensus 212 ~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~D----Gv~til~~~~~fg~~~~gls~ 287 (438)
T COG2270 212 FALPMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYID----GVNTILAMGGVFGAADLGLSS 287 (438)
T ss_pred HHhHHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHh----hHHHHHHHHHHHHHHHcCccH
Confidence 0001111101110 0 112335566666666666666655544 333333333333 34788877
Q ss_pred h---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcc
Q 014286 262 G---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGA 338 (427)
Q Consensus 262 ~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (427)
. +......+..++|+++.|++.||+|.|+++..+.++..+..+...+... + ....+..++++...+ +.
T Consensus 288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~-----~---~~f~i~gll~g~s~G-~~ 358 (438)
T COG2270 288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG-----E---LDFWILGLLVGTSLG-GA 358 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc-----c---HHHHHHHHHHHHhcc-hH
Confidence 6 4666677888999999999999999999988888777666555444322 1 112222233333332 44
Q ss_pred cchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHH
Q 014286 339 GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~ 404 (427)
.+..-++..+.+|+++-++..|+++..+...+.++|.+.+.+.+.+| .+..+....++..++.++.
T Consensus 359 qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 359 QASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 56667799999999999999999999999999999999999999887 4445555555555554443
No 109
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.63 E-value=2.4e-13 Score=126.25 Aligned_cols=317 Identities=16% Similarity=0.119 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhhcccchhHHH-HHhhHHHHHHHHHHHhh-h-hhHHHHHHHHHHhhhccccccceeecc
Q 014286 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF-QLCALPMIIGASISATT-R-NLIGMLLGRFVVGTGMGLGPTVAALYV 166 (427)
Q Consensus 90 ~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~g~~~~~~~~~i 166 (427)
.++..++..+..++..|+.|.++|+-|+||.+ .+...+..+++.+..+. + +++...+.-++.-++.+...+.-.+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 36788889999999999999999999977665 44555566667766663 3 444445555555566666666666666
Q ss_pred cCCchhhhh---c----------------------CChHH---HHHHHH----------HHhCCCch-------hh----
Q 014286 167 TESPHWLYK---K----------------------GRTAE---AEAEFE----------KLLGGSHV-------KS---- 197 (427)
Q Consensus 167 ~~~~~~~~~---~----------------------~~~~~---~~~~~~----------~~~~~~~~-------~~---- 197 (427)
+|-.+--.. . ++... +...+. .+...... +.
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 641110000 0 11000 000000 00000000 00
Q ss_pred --------HHH---HHhhhhc-CC-CCCc----c-------hhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHH
Q 014286 198 --------SLA---ELSKLDR-GD-DGDI----V-------KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV 253 (427)
Q Consensus 198 --------~~~---~~~~~~~-~~-~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
..+ ..++.+. ++ +... . .++++.|.|+...++++.+++.- +..+.......+.
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~d---g~~ti~~~~~i~a 308 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSD---GVNTIISFAGIYA 308 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Confidence 000 0111111 00 1111 1 12333334444444444443332 2233333333444
Q ss_pred HHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCcc--chhhhhhHHHHHHHHHHH--HHhhcCCCCCchhHHHHHH
Q 014286 254 FKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRK--ALLQWSFFSMAVSMAIQV--AASSSYIPGSASLYLSVGG 326 (427)
Q Consensus 254 ~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 326 (427)
.+..|++.. ...+...+.+++|+++.|++.||+|.| +.+..+.+...+..+.-. +.... ....+.+...+.
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~--~g~~~~~~f~~~ 386 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSF--FGLKSPWEFWVL 386 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcc--cCcccHHHHHHH
Confidence 457888877 566677888999999999999999988 676666555533222211 11111 012222333333
Q ss_pred HHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHH
Q 014286 327 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 405 (427)
..+.+... .+..+...++.+|+.|+++.+...|++...+...+.+||.+.|.+.+.+| .+..+....++.+++.++.
T Consensus 387 a~~~G~~~-G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll- 464 (477)
T PF11700_consen 387 AVLIGLFM-GGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL- 464 (477)
T ss_pred HHHHHHHh-hhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-
Confidence 33333333 34467777799999999999999999999999999999999999999998 7778877777777776665
Q ss_pred HhccCCCC
Q 014286 406 RNVVETKG 413 (427)
Q Consensus 406 ~~~~~~~~ 413 (427)
...+..|+
T Consensus 465 ~~v~~~~g 472 (477)
T PF11700_consen 465 FFVDVEKG 472 (477)
T ss_pred hhccchhh
Confidence 34444333
No 110
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.61 E-value=5.4e-14 Score=127.00 Aligned_cols=302 Identities=18% Similarity=0.182 Sum_probs=186.5
Q ss_pred hhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc----cchhHH-HHHhhHHHHHHHHHHHhhhh------hHHH
Q 014286 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRA-FQLCALPMIIGASISATTRN------LIGM 144 (427)
Q Consensus 76 ~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~------~~~l 144 (427)
.+.+.+|++.... |.+..+.-+--++.-|+.|.+.|| +||+|. ++.+.+..++.+.++-.+++ ....
T Consensus 38 fYTdv~Gis~~~a--G~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya 115 (467)
T COG2211 38 FYTDVFGLSAALA--GTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA 115 (467)
T ss_pred HHhcccCCcHHHH--HHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHH
Confidence 4455667755544 888888888888999999999996 787655 57777889999888887773 4456
Q ss_pred HHHHHHHhhhccccccceeecccCCchhhhhcCC---hHHHHHHHH------------HHhCCCc---------------
Q 014286 145 LLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGR---TAEAEAEFE------------KLLGGSH--------------- 194 (427)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~------------~~~~~~~--------------- 194 (427)
++.-.+.+++.......-.++.+|-.+-..++.+ +........ ...+...
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 6777788888777666555555541100000000 000000000 0011110
Q ss_pred ----hhhHHHHHhhhh----cCCCCCcchhH----hhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh
Q 014286 195 ----VKSSLAELSKLD----RGDDGDIVKFE----ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG 262 (427)
Q Consensus 195 ----~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 262 (427)
........++.. +.++..+.+++ .+++|+.+....+..++.............+|..+.+++....+.
T Consensus 196 ~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~ 275 (467)
T COG2211 196 GVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAY 275 (467)
T ss_pred HHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHH
Confidence 000000111111 11111223333 567788877766655555554444444445555555444333344
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
........+.+++.++..++.+|+|+|+++..+.++.+++.+++.+... .+.+..++..++.+.+.+ ...++.
T Consensus 276 ~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~------~~~~l~~~~~~i~~~g~~-~~~~l~ 348 (467)
T COG2211 276 LLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA------GSVVLIVVALIIAGVGTG-IANPLP 348 (467)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC------cchHHHHHHHHHHHHHhh-cccccc
Confidence 5666666777777899999999999999999999999998888877652 122333333333333333 446788
Q ss_pred hhhccCcCC-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 014286 343 SLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 386 (427)
Q Consensus 343 ~~~~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 386 (427)
+++++|... .+.-|...|...++.-+|.+++..+.|+..+..||
T Consensus 349 wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 349 WAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888888754 34458889999999999999999999999988775
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.57 E-value=7.2e-13 Score=116.74 Aligned_cols=355 Identities=14% Similarity=0.075 Sum_probs=208.6
Q ss_pred CCchhHHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHH
Q 014286 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (427)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~ 123 (427)
+..+++|.++++.++..+.+++..-.+++.-.....-++ +.+.. -|..-+|++.+....+++-|+.|++|-|..+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~--~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAA--DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHH--HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 345677888888888888888888777887777777788 33333 588999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhh------hhH--HHHHHHHHHhhhccccccceeecccCCchhhhhcCChH-HHHHHH--------
Q 014286 124 CALPMIIGASISATTR------NLI--GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTA-EAEAEF-------- 186 (427)
Q Consensus 124 ~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~-------- 186 (427)
+..+..+|+.+-..+. .++ ....+..+.+.+.-..... +.-++++ |+....+.. .....+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~l-PskiA~~--WF~~~qra~A~~~~v~~n~LGvav 191 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGL-PSKIAAV--WFPPDQRAIATVLGVMGNPLGVAV 191 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcc-ccHHHHh--hCCcchhhhhhhHHHhcchHHHHH
Confidence 9999999999877652 334 4455666655544322221 1112211 111111000 000000
Q ss_pred HHHhCCCc--------------------------hhhHHHHH--hh----------hhcCCCCCcchhHhhhcccchhHH
Q 014286 187 EKLLGGSH--------------------------VKSSLAEL--SK----------LDRGDDGDIVKFEELLYGRHFRVV 228 (427)
Q Consensus 187 ~~~~~~~~--------------------------~~~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 228 (427)
..+..... ........ ++ ....+..-..+.++.++++++...
T Consensus 192 g~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il 271 (480)
T KOG2563|consen 192 GFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIIL 271 (480)
T ss_pred HhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHH
Confidence 00000000 00000000 00 000111223456677888877766
Q ss_pred HHHHHHHHhhhccchhHHHHhHHHHHHhcCCC---hhHHHHHHHHHHHHHHHhHhhhhcccCc-cchhhhhhHHHHHHHH
Q 014286 229 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGR-KALLQWSFFSMAVSMA 304 (427)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~ 304 (427)
.+++..... .++.+...+...+...|++ .+.......+++++++.+.|.+.||.+. |.+.+.......++..
T Consensus 272 ~~~ygi~~g----~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 272 AICYGIGLG----LFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHhhhHH----HHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 666555444 3333333343333344444 4477888888999999999999999875 4444444444444432
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014286 305 IQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL 384 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 384 (427)
.+..... .....+.... .....+.++.+..|+..-+..|..-|..-++..|+.+..+++-+++-.++.+...+..
T Consensus 348 ~l~~~t~----~~~~~viv~~-t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 348 MLLTCTL----FLGDSVIVFT-TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred HHHHhhc----cCCceEehhh-hHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 2222211 1111122222 2223333455667777777777644455688899999999999999999999988877
Q ss_pred c----cchhHHHHHHHHHHHHHHHHHhccCCCC
Q 014286 385 G----PQLLYSIFGTFCLMAVAFVKRNVVETKG 413 (427)
Q Consensus 385 g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (427)
+ +...-+.....+.+...+..++.++.++
T Consensus 423 ~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 423 GPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred CCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 7 4444455555555555555555544433
No 112
>PRK11462 putative transporter; Provisional
Probab=99.57 E-value=3.4e-13 Score=126.43 Aligned_cols=303 Identities=14% Similarity=0.076 Sum_probs=157.4
Q ss_pred hhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc----cchhHHH-HHhhHHHHHHHHHHHhhhh------hH
Q 014286 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAF-QLCALPMIIGASISATTRN------LI 142 (427)
Q Consensus 74 ~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr----~Grr~~l-~~~~~~~~~~~~~~~~~~~------~~ 142 (427)
+..+.+.+|++.... |.+..+.-+--++..|+.|.++|| +||||.. +++.+..+++.+++-..++ +.
T Consensus 33 ~~fyt~~~Gl~~~~~--g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~ 110 (460)
T PRK11462 33 MFFYTDIFGIPAGFV--GTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHhhCCCHHHH--HHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 334556678754444 899988889999999999999996 7987665 5676778877776654442 33
Q ss_pred HHHHHHHHHhhhccccccceeecccCCchhhhhcCChH---HHHHHH------------HHHhCCCc-------------
Q 014286 143 GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTA---EAEAEF------------EKLLGGSH------------- 194 (427)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~------------~~~~~~~~------------- 194 (427)
.+.+.-++..++.......-.++.+|-.+-...+.+.. ...... ....+...
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ 190 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS 190 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 45555555565555444433333332100000000000 000000 00000000
Q ss_pred ----hh--hHHHHHhhhhcCCC---CCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChhHHH
Q 014286 195 ----VK--SSLAELSKLDRGDD---GDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLAN 265 (427)
Q Consensus 195 ----~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 265 (427)
.. ......++..+.++ ..+..++..++++.++......++.............+|..+..+... ......
T Consensus 191 ii~~i~~~i~~~~~kE~~~~~~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l 269 (460)
T PRK11462 191 VVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFL 269 (460)
T ss_pred HHHHHHHHHHHhcceeccCCCccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHH
Confidence 00 00000011111111 112334566777777665544444444333333444444444432111 111345
Q ss_pred HHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhh
Q 014286 266 VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLL 345 (427)
Q Consensus 266 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (427)
....+..+++.+++++++||+++|+.+..+..+..+..+++.+.. ....+...+..++.+.+. ....+..+++
T Consensus 270 ~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~g~~~-~~~~~l~~~m 342 (460)
T PRK11462 270 TTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVP------MQASITMFVFIFVIGVLH-QLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc------hhHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 566677888999999999999998877655444433333322221 111112222223333332 2234455556
Q ss_pred ccCcCC-------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 014286 346 LPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 386 (427)
Q Consensus 346 ~~~~~p-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 386 (427)
..|..+ .+..|...+.......+|..+++.+.|.+.+..|+
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666644 23335556777788999999999999999987775
No 113
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.55 E-value=1.6e-12 Score=120.57 Aligned_cols=97 Identities=24% Similarity=0.276 Sum_probs=69.8
Q ss_pred ccchhhhh-hhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc-chhHHHHHhhHHHHHHHHHHHhhh-hhHHHHH
Q 014286 70 VNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTR-NLIGMLL 146 (427)
Q Consensus 70 ~~~~~~~i-~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~ 146 (427)
+...+|.+ .+++|++..+. +.+.+.+.....++.+++|+++||+ ||||+++++.++..++.++++..+ +...+.+
T Consensus 28 ~~~~L~~yL~~~lgls~~~a--~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l 105 (493)
T PRK15462 28 MRALLILYLTNQLKYDDNHA--YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYL 105 (493)
T ss_pred HHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 34455544 56688766555 8999999999999999999999999 999999999999999988777643 2233444
Q ss_pred HHHHHhhhccccccceeecccC
Q 014286 147 GRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
+..+.++|.|...+...+++.|
T Consensus 106 ~l~li~iG~G~~~~~~~alv~e 127 (493)
T PRK15462 106 SLAIIVCGYGLFKSNVSCLLGE 127 (493)
T ss_pred HHHHHHHhcccccccHHHHHHH
Confidence 4444445556555544555554
No 114
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=3.6e-13 Score=119.21 Aligned_cols=167 Identities=16% Similarity=0.100 Sum_probs=140.0
Q ss_pred HHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHh
Q 014286 234 LFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 310 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 310 (427)
+..+..........-.+|.+.++++.+.. +....++.+..++.++...+.||+.||+++.....++.++.++..+.+
T Consensus 20 ~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp 99 (394)
T COG2814 20 LAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP 99 (394)
T ss_pred HHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333333455566678899999999987 688889999999999999999999999999999999999999999887
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 014286 311 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLY 390 (427)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 390 (427)
++. ...+.=++.+...+ .+.++..++..++.|+++|+++.++......+...+|.+++.++-|.+||+..|
T Consensus 100 ~f~--------~Ll~aR~~~g~a~G-~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F 170 (394)
T COG2814 100 SFA--------VLLLARALAGLAHG-VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170 (394)
T ss_pred cHH--------HHHHHHHHHHHHHH-HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence 643 44444444554444 345566669999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 014286 391 SIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~ 409 (427)
+..+++.++..+..+...|
T Consensus 171 ~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 171 LAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 9999999999988888888
No 115
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.54 E-value=7.7e-14 Score=126.25 Aligned_cols=108 Identities=23% Similarity=0.264 Sum_probs=88.8
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccch-hHHHHHhhHHHHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMII 130 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~ 130 (427)
.+.+..+..++.....+++.+..-.+.++++.+.++...|++.++..++.+++++.+|..+.|.|. |+.++.|.++..+
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~ 114 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAII 114 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHH
Confidence 455666677777788888877776777776666666666999999999999999999999999997 8889999999999
Q ss_pred HHHHH-Hh---hh-hhHHHHHHHHHHhhhccccc
Q 014286 131 GASIS-AT---TR-NLIGMLLGRFVVGTGMGLGP 159 (427)
Q Consensus 131 ~~~~~-~~---~~-~~~~l~~~r~l~G~~~g~~~ 159 (427)
++++. ++ .+ .-+.++++|++.|+|.|...
T Consensus 115 g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a 148 (488)
T KOG2325|consen 115 GNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA 148 (488)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH
Confidence 99998 43 23 67889999999999977543
No 116
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=1.7e-13 Score=119.76 Aligned_cols=176 Identities=11% Similarity=0.074 Sum_probs=140.3
Q ss_pred HHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHH
Q 014286 227 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 303 (427)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 303 (427)
..++..++.....+..-..+..-.|.+.++.+++.. .+.+.+.+..-++-++.|.++||.+.|..+..+.++.++..
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~n 108 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVN 108 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHH
Confidence 344444443333333344444556777788878876 57777888889999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHH--HHHH
Q 014286 304 AIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF--LRLL 381 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~ 381 (427)
+++++..+. +...+...+-+.+.+.++.|... .+..-+|+++||+..++-|+..++|+.+.|.+. +.+.
T Consensus 109 il~Gfs~s~--------~~~~~l~~lng~fQg~Gwpp~~~-~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 109 ILFGFSPSL--------FLFAVLWVLNGWFQGMGWPPCAR-TITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHhhhhHH--------HHHHHHHHHHHHHhcCCCcHHHH-HHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 999887642 34555556666677777777776 888899999999999999999999999999999 8999
Q ss_pred HHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 382 EQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 382 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
++.+|+..|++-++++++.+++.++..+++
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888999999999999998888887776654
No 117
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.53 E-value=4.3e-13 Score=125.34 Aligned_cols=157 Identities=15% Similarity=0.112 Sum_probs=119.5
Q ss_pred HHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhH
Q 014286 245 AIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLY 321 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (427)
....+.|.+.++.|.+.. .......++..++.++.|++.||+|||+.+..+.++.+++.++.....+. +
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--------~ 112 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSL--------W 112 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHH--------H
Confidence 445667788888898876 55667778888999999999999999999999998888887776654432 2
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 014286 322 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 401 (427)
...+...+.+.+.+.. .+....++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..||+..|.+.+++.++..
T Consensus 113 ~l~~~~~l~g~~~g~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 113 AFALLWVLNAFFQGWG-WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHcc-chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 2333333334444433 345555889999999999999999999999999999999999999999999988887766555
Q ss_pred HHHHHhccC
Q 014286 402 AFVKRNVVE 410 (427)
Q Consensus 402 ~~~~~~~~~ 410 (427)
++..+..+|
T Consensus 192 ~~~~~~~~~ 200 (434)
T PRK11663 192 LFLCWRLRD 200 (434)
T ss_pred HHHHHHcCC
Confidence 444444444
No 118
>PRK10054 putative transporter; Provisional
Probab=99.52 E-value=9.9e-13 Score=121.23 Aligned_cols=156 Identities=12% Similarity=0.055 Sum_probs=112.9
Q ss_pred HHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 246 IFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 246 ~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
.++..+++.++.|.+.. +......+..+++.+..|+++||+|||+.+..+.++..++.+++.+..+. +.
T Consensus 27 ~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~--------~~ 98 (395)
T PRK10054 27 LPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNV--------TL 98 (395)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHH--------HH
Confidence 33444555567888876 45555667788889999999999999999988888887777766654431 22
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 402 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 402 (427)
.+....+.+...+ ...+....+..|..|+++|+++.|+.+...++|..++|.+.+.+.+ .||+..|.+.+++.++..+
T Consensus 99 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i 176 (395)
T PRK10054 99 VVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLV 176 (395)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHH
Confidence 2222223333322 3345566688899999999999999999999999999999998875 7899999888877776655
Q ss_pred HHHHhccCC
Q 014286 403 FVKRNVVET 411 (427)
Q Consensus 403 ~~~~~~~~~ 411 (427)
+..+..++.
T Consensus 177 ~~~~~~~~~ 185 (395)
T PRK10054 177 FIQIWVQRS 185 (395)
T ss_pred HHHHHHhcc
Confidence 554444443
No 119
>PRK03545 putative arabinose transporter; Provisional
Probab=99.50 E-value=1.3e-12 Score=120.68 Aligned_cols=155 Identities=15% Similarity=0.063 Sum_probs=117.9
Q ss_pred HhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHH
Q 014286 248 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 324 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (427)
...|.+.+++|.+.. +......++..++.+..|++.||+|||+.+..+..+.+++.+...+..+. +..+
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--------~~l~ 101 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNF--------TVLL 101 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccH--------HHHH
Confidence 346778888898877 44455666777888889999999999999999988888887777664332 2333
Q ss_pred HHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 014286 325 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
+...+.+.+.+ ...+...+++.|.+|+++|+++.|+......+|..++|++.+.+.+..||+..|.+.+++.++..+..
T Consensus 102 ~~r~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 102 ISRIGIAFAHA-IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 33333333332 23355556889999999999999999999999999999999999999999999999888877776665
Q ss_pred HHhccCC
Q 014286 405 KRNVVET 411 (427)
Q Consensus 405 ~~~~~~~ 411 (427)
....|+.
T Consensus 181 ~~~~~~~ 187 (390)
T PRK03545 181 IKLLPLL 187 (390)
T ss_pred HHhCCCC
Confidence 5555543
No 120
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.50 E-value=1.2e-12 Score=121.49 Aligned_cols=170 Identities=16% Similarity=0.072 Sum_probs=126.6
Q ss_pred HHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHh
Q 014286 234 LFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 310 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 310 (427)
+.......-.....+..+.+.++++.+.. +......++..++.+..|++.||+|||+.+..+.++..++..+..+..
T Consensus 15 ~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 94 (412)
T TIGR02332 15 ILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT 94 (412)
T ss_pred HHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333333444555566777788888876 566677788889999999999999999999999888888887776643
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH------Hh
Q 014286 311 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE------QL 384 (427)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~------~~ 384 (427)
+. +...+.-++.+.+.+. ..+....++.|.+|+++|+++.|+.+....+|..+++.+.+.+.+ ..
T Consensus 95 ~~--------~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 165 (412)
T TIGR02332 95 GP--------ESLYLLRILVGIAEAG-FLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK 165 (412)
T ss_pred CH--------HHHHHHHHHHHHHHhh-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 32 2333444444444443 345555588999999999999999999999999999999998875 35
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhccCCC
Q 014286 385 GPQLLYSIFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 385 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
||+..|.+.++..++..++.+++.+|++
T Consensus 166 gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 166 GWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 8999999988877776666666666654
No 121
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.50 E-value=7.6e-13 Score=122.04 Aligned_cols=161 Identities=13% Similarity=0.111 Sum_probs=120.9
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.......|.+.++.|.+.. +......++..++.++.|++.||+|||+.+..+..+..++.+......+ .
T Consensus 22 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~--------~ 93 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNN--------I 93 (385)
T ss_pred HHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc--------H
Confidence 3333446677788888776 5666677888899999999999999999999988888887777665432 1
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
+...+..++.+.+.+. ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..+.+.+++.++.
T Consensus 94 ~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 172 (385)
T TIGR00710 94 ETLLVLRFVQAFGASA-GSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILL 172 (385)
T ss_pred HHHHHHHHHHHcchhH-HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 2333333333333332 234555588999999999999999999999999999999999999999999998888877777
Q ss_pred HHHHHHhccCCCC
Q 014286 401 VAFVKRNVVETKG 413 (427)
Q Consensus 401 ~~~~~~~~~~~~~ 413 (427)
.+......+|+++
T Consensus 173 ~~~~~~~~~~~~~ 185 (385)
T TIGR00710 173 SALIFFILPETLP 185 (385)
T ss_pred HHHHHHhCCCCCC
Confidence 6666555665543
No 122
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.49 E-value=1.8e-12 Score=119.46 Aligned_cols=154 Identities=14% Similarity=0.152 Sum_probs=118.3
Q ss_pred hHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q 014286 249 FSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 325 (427)
Q Consensus 249 ~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (427)
..|.+.++.|.++. .......++..++.++.|++.||+|||+.+..+.++.+++.++.....+ .+..++
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~ 113 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANS--------FSLLLI 113 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHCh--------HHHHHH
Confidence 45667788888876 4455667788889999999999999999999999998887777655432 233444
Q ss_pred HHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 326 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
.-.+.+.+.+. ..+....++.|.+|+++|+.+.++.....+++..++|.+.+.+.+..||+..|.+.+++.++..+...
T Consensus 114 ~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~ 192 (394)
T PRK10213 114 GRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWII 192 (394)
T ss_pred HHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 44444444443 34556668899999999999999999999999999999999999999999999888776666554444
Q ss_pred HhccCC
Q 014286 406 RNVVET 411 (427)
Q Consensus 406 ~~~~~~ 411 (427)
...||.
T Consensus 193 ~~~p~~ 198 (394)
T PRK10213 193 KSLPSL 198 (394)
T ss_pred HHCCCC
Confidence 445553
No 123
>TIGR00895 2A0115 benzoate transport.
Probab=99.48 E-value=6.8e-13 Score=122.90 Aligned_cols=160 Identities=21% Similarity=0.217 Sum_probs=120.7
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
.....++.|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+..+..++.++.....+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-------- 104 (398)
T TIGR00895 33 LAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATN-------- 104 (398)
T ss_pred HHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccc--------
Confidence 44555677888888888766 4556667788899999999999999999999988887777766654322
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
.+...+...+.+.+.+ ...+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..+.+.+++..+
T Consensus 105 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 183 (398)
T TIGR00895 105 VTQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLL 183 (398)
T ss_pred hHHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHH
Confidence 1233333344443333 234555668999999999999999999999999999999999999999999999888766666
Q ss_pred HHHHHHHhccCC
Q 014286 400 AVAFVKRNVVET 411 (427)
Q Consensus 400 ~~~~~~~~~~~~ 411 (427)
..++.....+++
T Consensus 184 ~~~~~~~~~~~~ 195 (398)
T TIGR00895 184 LLLLLMRFLPES 195 (398)
T ss_pred HHHHHHHhCCCC
Confidence 665555556654
No 124
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.47 E-value=1.4e-12 Score=123.96 Aligned_cols=172 Identities=14% Similarity=0.031 Sum_probs=126.2
Q ss_pred HHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHH
Q 014286 231 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 307 (427)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 307 (427)
...+..+....-.+....-.|.+.++.+.+.. +....+.++...+.+..|+++||+|||+.+..+..+..++.+++.
T Consensus 10 ~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~ 89 (495)
T PRK14995 10 IIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAA 89 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 33333333333455556667888888887664 566677788888889999999999999999999999988888877
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccC-cCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 014286 308 AASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPE-IFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 386 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 386 (427)
...+ .+..++.-.+.+.+.+. ..+.....+.+ ..|+++|+++.|+......+|..++|.+.|.+.++.||
T Consensus 90 ~a~~--------~~~li~~r~l~G~g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 90 FSPT--------ASWLIATRALLAIGAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HcCC--------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 6533 23344444445544443 23333334444 44778999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhccCC
Q 014286 387 QLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
++.|++...+.++..++..+..|+.
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999988877777766666666654
No 125
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=1.1e-12 Score=121.26 Aligned_cols=158 Identities=16% Similarity=0.123 Sum_probs=122.8
Q ss_pred HHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhH
Q 014286 245 AIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLY 321 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (427)
......|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+.++.+++..++.+..+ .+
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~--------~~ 83 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGA--------YV 83 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcC--------HH
Confidence 344556677778888766 5677778888999999999999999999999988888887777665442 23
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 014286 322 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 401 (427)
...+...+.+.+.+. ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+|+..|.+.+++.++..
T Consensus 84 ~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 84 SLYILRVLLGAAEAP-FFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHh-hhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 444444555555443 3455566999999999999999999999999999999999999999999999988888777766
Q ss_pred HHHHHhccCC
Q 014286 402 AFVKRNVVET 411 (427)
Q Consensus 402 ~~~~~~~~~~ 411 (427)
++.....+++
T Consensus 163 ~~~~~~~~~~ 172 (399)
T TIGR00893 163 VLWLKFIPDP 172 (399)
T ss_pred HHhhheecCC
Confidence 6655555544
No 126
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.45 E-value=4.3e-12 Score=117.89 Aligned_cols=160 Identities=15% Similarity=0.101 Sum_probs=116.4
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
.........+.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+.++.+++.++..+..+
T Consensus 27 ~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~------- 99 (405)
T TIGR00891 27 DFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPG------- 99 (405)
T ss_pred HHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 455555666777788888766 5666677888899999999999999999999988888877776665432
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--PQLLYSIFGTF 396 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~ 396 (427)
.+..+...++.+.+.+. ..+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+ |+..|.+.++.
T Consensus 100 -~~~l~~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~ 177 (405)
T TIGR00891 100 -YITMFIARLVIGIGMGG-EYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILP 177 (405)
T ss_pred -HHHHHHHHHHHHhhhhh-hhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHH
Confidence 12333444444444433 334555588999999999999999999999999999999999988776 88888765544
Q ss_pred HHHHHHHHHHhccCC
Q 014286 397 CLMAVAFVKRNVVET 411 (427)
Q Consensus 397 ~~~~~~~~~~~~~~~ 411 (427)
.++. ++.....||+
T Consensus 178 ~~~~-~~~~~~~~~~ 191 (405)
T TIGR00891 178 IIFA-LWLRKNIPEA 191 (405)
T ss_pred HHHH-HHHHHhCCCC
Confidence 4433 3333445554
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.45 E-value=1.9e-12 Score=120.24 Aligned_cols=160 Identities=16% Similarity=0.079 Sum_probs=118.7
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
........|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++.++.....+
T Consensus 31 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-------- 102 (406)
T PRK11551 31 LQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWD-------- 102 (406)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhcc--------
Confidence 34445556777888888876 5666777888899999999999999999999988877777665554322
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
.+...+...+.+.+.+. ..+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+|+..|++.+++.++
T Consensus 103 ~~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (406)
T PRK11551 103 FPSLLVARLLTGVGLGG-ALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLL 181 (406)
T ss_pred HHHHHHHHHHHHhhHHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 23333444444444333 23455568999999999999999999999999999999988888888999888887776666
Q ss_pred HHHHHHHhccCC
Q 014286 400 AVAFVKRNVVET 411 (427)
Q Consensus 400 ~~~~~~~~~~~~ 411 (427)
..++...+.+|+
T Consensus 182 ~~~~~~~~l~~~ 193 (406)
T PRK11551 182 LVPLLMRWLPES 193 (406)
T ss_pred HHHHHHHhCCCC
Confidence 555555555554
No 128
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.45 E-value=2.4e-12 Score=118.99 Aligned_cols=162 Identities=15% Similarity=0.113 Sum_probs=120.2
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
.........|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+..+..++...+....+
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~------- 90 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAET------- 90 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCc-------
Confidence 344444567788888888876 4556666778888999999999999999999988888877776654332
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCL 398 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 398 (427)
.+.......+.+.+.+. ..+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..||+..+.+.+++.+
T Consensus 91 -~~~~~~~~~l~g~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~ 168 (392)
T PRK10473 91 -SSLFLAGRFLQGIGAGC-CYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGI 168 (392)
T ss_pred -HHHHHHHHHHHHhhhhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHH
Confidence 12223333333333322 2344555888999999999999999999999999999999988888899999988888777
Q ss_pred HHHHHHHHhccCCC
Q 014286 399 MAVAFVKRNVVETK 412 (427)
Q Consensus 399 ~~~~~~~~~~~~~~ 412 (427)
+..++.....+|++
T Consensus 169 i~~~~~~~~~~~~~ 182 (392)
T PRK10473 169 LVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHcCCCC
Confidence 77666656666554
No 129
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.44 E-value=3.7e-12 Score=118.12 Aligned_cols=154 Identities=16% Similarity=0.112 Sum_probs=116.5
Q ss_pred HHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 014286 250 SSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 326 (427)
Q Consensus 250 ~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
+|.+.++++.+.. .....+.++..++.++.|+++||+|||+++..+..+..++.+......+ .+..++.
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~--------~~~l~~~ 110 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTS--------MTQFLIA 110 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCC--------HHHHHHH
Confidence 4456677788766 4566667888899999999999999999999998888877776665432 1233444
Q ss_pred HHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 014286 327 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 406 (427)
-++.+.+.+. ..+....+..|.+|+++++++.++.+....++..++|.+.+.+.+..||+..|++.+++.++..+...+
T Consensus 111 r~l~Gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 111 RFIQGTSICF-IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444332 234445578899999999999999999999999999999999999889999999988887777665555
Q ss_pred hccCCC
Q 014286 407 NVVETK 412 (427)
Q Consensus 407 ~~~~~~ 412 (427)
..||++
T Consensus 190 ~lp~~~ 195 (413)
T PRK15403 190 AMPETV 195 (413)
T ss_pred hCCCCc
Confidence 567653
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.44 E-value=5.6e-12 Score=118.53 Aligned_cols=160 Identities=13% Similarity=0.057 Sum_probs=109.4
Q ss_pred HHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 246 IFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 246 ~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
.....|++.++ |.+.. .......++..++.++.|+++||+|||+.+..+.++.+++.+.+.+.... ..+.+.
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~----~~~~~~ 122 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA----TSSIAV 122 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc----cccHHH
Confidence 34556776666 87766 56666778888999999999999999999999988888877766654311 111223
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFF-VGLLFLRLLEQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 401 (427)
..+...+.+.+.+.. .+.....+.|.+|+++|+++.|+.+....+|+.+ +|.+...+....||+..|++.+++.++..
T Consensus 123 ~~~~~~l~gi~~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 123 MFVLLFLCGWFQGMG-WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVA 201 (452)
T ss_pred HHHHHHHHHHHHhcc-chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 333344444444433 3333347788899999999999999998888754 44433333344589999988887777766
Q ss_pred HHHHHhccCC
Q 014286 402 AFVKRNVVET 411 (427)
Q Consensus 402 ~~~~~~~~~~ 411 (427)
++..++.+|+
T Consensus 202 ~l~~~~~~~~ 211 (452)
T PRK11273 202 LFAFAMMRDT 211 (452)
T ss_pred HHHHHHccCC
Confidence 6665555553
No 131
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.44 E-value=3.6e-12 Score=119.38 Aligned_cols=159 Identities=13% Similarity=0.064 Sum_probs=111.4
Q ss_pred HHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 014286 247 FYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 323 (427)
Q Consensus 247 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (427)
....|++.+ .|.+.. +......++..++.++.|+++||+|||+.+..+.++.+++.+.+...... ..+.+..
T Consensus 47 ~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 121 (438)
T TIGR00712 47 ALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----TSSIAIM 121 (438)
T ss_pred HhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc----cchHHHH
Confidence 344555554 477766 56667778888999999999999999999888888777776665443211 1112222
Q ss_pred HHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhccchhHHHHHHHHHHHHH
Q 014286 324 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-QLGPQLLYSIFGTFCLMAVA 402 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~~~~~~~~~~~~~~ 402 (427)
.+...+.+.+.+... +.....+.|.+|+++|+++.|+.+....+++.+++.+.+...+ ..||+..|++.+++.++..+
T Consensus 122 ~~~~~l~g~~~g~~~-~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 122 FVLLFLNGWFQGMGW-PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred HHHHHHHHHHhhcch-HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 333333444444333 3344477899999999999999999999999999988876554 46899999988888777666
Q ss_pred HHHHhccCC
Q 014286 403 FVKRNVVET 411 (427)
Q Consensus 403 ~~~~~~~~~ 411 (427)
+.+++.+|+
T Consensus 201 ~~~~~~~~~ 209 (438)
T TIGR00712 201 FAFAMMRDT 209 (438)
T ss_pred HHHHhccCC
Confidence 655555543
No 132
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.43 E-value=6.7e-12 Score=116.94 Aligned_cols=187 Identities=17% Similarity=0.041 Sum_probs=125.4
Q ss_pred hhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccch
Q 014286 215 KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKAL 291 (427)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 291 (427)
+++.+.+++.++..++..++..+. ........|.+.++.+.+.. .......++.+++.++.|+++||+|||+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~ 84 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFG----LGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL 84 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE
Confidence 344455677777666665554442 33444455655555555554 56677778888999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHH
Q 014286 292 LQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINF 371 (427)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 371 (427)
+..+..+.+++...+...... .....+...+..++.+.+.+.. .+....++.|.+|+++|+++.++.+...++|..
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 160 (417)
T PRK10489 85 ILLARGTCGLGFIGLALNAFL---PEPSLLAIYLLGLWDGFFGSLG-VTALLAATPALVGRENLMQAGAITMLTVRLGSV 160 (417)
T ss_pred EEehHHHHHHHHHHHHHHHHc---CCCcHHHHHHHHHHHHHHHHHH-HHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHH
Confidence 988877777666554432111 1112223333333334333333 233444788999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 372 FVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 372 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
++|.+.+.+.+..||++.+.+.++..++..++. ...++
T Consensus 161 ~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 198 (417)
T PRK10489 161 ISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPA 198 (417)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCC
Confidence 999999999998899988887776666554443 34444
No 133
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.43 E-value=1.6e-11 Score=115.95 Aligned_cols=178 Identities=11% Similarity=0.031 Sum_probs=117.6
Q ss_pred hcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhh
Q 014286 220 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSF 296 (427)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 296 (427)
+++++.+.............. .......+.+.+.+++|.+.. .......++..++.++.|+++||+|||+.+..+.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 30 FARPHMRAFHLSWISFFTCFV-STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred CCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 334444444444443333333 233344556778888898776 3455566777889999999999999999998888
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014286 297 FSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 376 (427)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 376 (427)
++.+++.++..+..+. +..++..++.+.+.+. ..+. ..++.|.+|+++||.+.|+.+...++|..+++.+
T Consensus 109 ~~~~~~~~~~~~~~s~--------~~l~~~r~l~G~~~~~-~~~~-~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~ 178 (476)
T PLN00028 109 MLTAPAVFCMSLVSSA--------TGFIAVRFFIGFSLAT-FVSC-QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL 178 (476)
T ss_pred HHHHHHHHHHHHhcCH--------HHHHHHHHHHHHHHHh-hHHH-HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH
Confidence 7777776666554321 2223333333333332 2233 3367899999999999999998888888888777
Q ss_pred HHHHHH---------HhccchhHHHHHHHHHHHHHHHHHhc
Q 014286 377 FLRLLE---------QLGPQLLYSIFGTFCLMAVAFVKRNV 408 (427)
Q Consensus 377 ~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~ 408 (427)
.+.+.+ ..||+..|.+.+++.++..++.+++.
T Consensus 179 ~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 179 MPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 655432 14899999998888877666555444
No 134
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.43 E-value=4.6e-12 Score=116.49 Aligned_cols=159 Identities=15% Similarity=0.114 Sum_probs=121.5
Q ss_pred HHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhH
Q 014286 245 AIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLY 321 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (427)
......|.+.++.|.+.. .......++..++.++.|++.||+|||+.+..+..+.+++.++..+..+ .+
T Consensus 21 ~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~--------~~ 92 (382)
T PRK10091 21 GIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSS--------YL 92 (382)
T ss_pred HHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCc--------HH
Confidence 444456777888888765 5677788899999999999999999999999999998888877766533 23
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 014286 322 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 401 (427)
..++...+.+.+.+.. .+.....+.|.+|+++|+.+.++......++..++|.+.+.+.+..||+..|.+.+++.++..
T Consensus 93 ~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 93 MLAIGRLVSGFPHGAF-FGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVL 171 (382)
T ss_pred HHHHHHHHHHhhhHHH-HHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 3344444444433332 334445778889988999999999999999999999999999998999999999888777666
Q ss_pred HHHHHhccCCC
Q 014286 402 AFVKRNVVETK 412 (427)
Q Consensus 402 ~~~~~~~~~~~ 412 (427)
+......||.+
T Consensus 172 ~~~~~~lp~~~ 182 (382)
T PRK10091 172 ASIYFWVPDIR 182 (382)
T ss_pred HHHHHhCCCCC
Confidence 55555666643
No 135
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.43 E-value=1.7e-12 Score=123.66 Aligned_cols=162 Identities=16% Similarity=0.075 Sum_probs=124.7
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
.........|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..+..+..++.++.....+
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~------- 89 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPN------- 89 (485)
T ss_pred HHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCC-------
Confidence 345555667888888888765 6777788899999999999999999999999998888888777664332
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCL 398 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 398 (427)
.+..++...+.+.+.+ ...+...+++.|.+|+++|+++.++......+|..++|.+.+.+.++.||++.|++.+.+.+
T Consensus 90 -~~~l~~~~~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~ 167 (485)
T TIGR00711 90 -LELMIIFRVIQGFGGG-PLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGI 167 (485)
T ss_pred -HHHHHHHHHHHHhhhh-hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHH
Confidence 2233333344443333 33455666899999999999999999999999999999999999999999999998887777
Q ss_pred HHHHHHHHhccCCC
Q 014286 399 MAVAFVKRNVVETK 412 (427)
Q Consensus 399 ~~~~~~~~~~~~~~ 412 (427)
+..++..+..++++
T Consensus 168 ~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 168 IVVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHHcCCcc
Confidence 66666655555543
No 136
>PRK03699 putative transporter; Provisional
Probab=99.43 E-value=7.3e-12 Score=115.69 Aligned_cols=153 Identities=14% Similarity=0.166 Sum_probs=113.3
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
........|.+.++++.+.. .......++..++.++.|++.||+|||+.+..+..+..++..+.....+
T Consensus 23 ~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~-------- 94 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHS-------- 94 (394)
T ss_pred HHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcch--------
Confidence 44555667788888888876 4556677888899999999999999999998888887777766655322
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhccchhHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-QLGPQLLYSIFGTFCL 398 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~~~~~~~~~~ 398 (427)
.+...+...+.+.+.+... +....++.|.+|+++|+.+.+..+....+++.++|.+.+.+.+ ..||+..|.+.+++.+
T Consensus 95 ~~~~~~~~~l~G~~~g~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~ 173 (394)
T PRK03699 95 LALFSIAMFVLGVVSGITM-SIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYV 173 (394)
T ss_pred HHHHHHHHHHHHHhhHhhc-cchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 2233344444444444333 3444588899999999999999988888999999999988875 4689999988877766
Q ss_pred HHHHHH
Q 014286 399 MAVAFV 404 (427)
Q Consensus 399 ~~~~~~ 404 (427)
+..++.
T Consensus 174 ~~~~~~ 179 (394)
T PRK03699 174 AIFILT 179 (394)
T ss_pred HHHHHH
Confidence 654443
No 137
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.42 E-value=8.9e-12 Score=113.96 Aligned_cols=156 Identities=14% Similarity=0.063 Sum_probs=114.2
Q ss_pred HHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 246 IFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 246 ~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
.....|.+..+.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++..+....... ...+.+.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 94 (365)
T TIGR00900 18 TQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL---GGLNIWQ 94 (365)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc---CCCcHHH
Confidence 33444555556666655 56666778888999999999999999999999888877777666555421 1112334
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 402 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 402 (427)
..+...+.+.+.+. ..+...+++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..||+..|.+.++..++..+
T Consensus 95 ~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~ 173 (365)
T TIGR00900 95 VYVLAGILAIAQAF-FTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISAL 173 (365)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 44444444444443 34555668999999999999999999999999999999999999999999998887776665544
Q ss_pred HHH
Q 014286 403 FVK 405 (427)
Q Consensus 403 ~~~ 405 (427)
...
T Consensus 174 ~~~ 176 (365)
T TIGR00900 174 LIV 176 (365)
T ss_pred HHH
Confidence 443
No 138
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.41 E-value=1.4e-11 Score=114.40 Aligned_cols=156 Identities=13% Similarity=0.067 Sum_probs=115.5
Q ss_pred HhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHH
Q 014286 248 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 324 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (427)
...+.+.++++.+.. .......++..++.++.|+++||+|||+.+..+.....++.+......+ .+..+
T Consensus 34 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--------~~~l~ 105 (406)
T PRK15402 34 PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQS--------IEQFT 105 (406)
T ss_pred cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHcc--------HHHHH
Confidence 345567778888776 4556677788889999999999999999999888887777766655432 12233
Q ss_pred HHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 014286 325 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
....+.+.+.+. ..+.....+.|.+|+++|+++.++......++..++|.+.+.+.+..||+..+++.+++.++..+..
T Consensus 106 ~~~~l~G~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 106 LLRFLQGIGLCF-IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHHHhHhhh-HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 333333333322 2345555788999999999999999888889999999999999998999999988888877776655
Q ss_pred HHhccCCC
Q 014286 405 KRNVVETK 412 (427)
Q Consensus 405 ~~~~~~~~ 412 (427)
+...||++
T Consensus 185 ~~~~~~~~ 192 (406)
T PRK15402 185 WRAMPETA 192 (406)
T ss_pred HHhCCCCC
Confidence 55566554
No 139
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.41 E-value=1.1e-11 Score=120.76 Aligned_cols=158 Identities=12% Similarity=0.079 Sum_probs=115.0
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
..+....|.+.++.+.+.. ++.....++.+++.+++|+++||+|||+.+.++.++.+++.++..+..+.
T Consensus 184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~-------- 255 (742)
T TIGR01299 184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGY-------- 255 (742)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhH--------
Confidence 3455567777778888765 56677788999999999999999999999999888888777766654321
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------ccc
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-------------GPQ 387 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-------------g~~ 387 (427)
+..+++-++.+++.+.. .+...+++.|.+|++.||...++.+....+|.++++.++..+.... +|+
T Consensus 256 ~~llv~R~l~G~g~g~~-~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR 334 (742)
T TIGR01299 256 GFFLFCRLLSGFGIGGA-IPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWR 334 (742)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHH
Confidence 23444444445444433 4666779999999999999999999999999999998887776544 356
Q ss_pred hhHHHHHHHHHHHHHHHHHhccCC
Q 014286 388 LLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
..+++.++.+++. ++..++.||.
T Consensus 335 ~l~~i~~lp~ll~-ll~~~~lPES 357 (742)
T TIGR01299 335 VFVIVCAFPCVFA-IGALTFMPES 357 (742)
T ss_pred HHHHHHHHHHHHH-HHHHHHcCCC
Confidence 6666655544443 4444566665
No 140
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.41 E-value=1.7e-11 Score=113.80 Aligned_cols=149 Identities=11% Similarity=0.041 Sum_probs=104.6
Q ss_pred HhHHHH-HHhcCCChh---HHHHHHHHHHHHHHHhHhhhhccc-CccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 248 YFSSSV-FKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 248 ~~~~~~-~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
.+++.+ .+..|++.. .....+.....++.+++|+++||+ |||+.+..+.++..++.+++..... . ...
T Consensus 30 ~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~------~-~~~ 102 (493)
T PRK15462 30 ALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI------H-PSF 102 (493)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc------c-hhH
Confidence 344433 455688776 345555667778889999999999 9999999999988888765543211 0 011
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcCCcc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSR--IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
......+...+.+. ..+...+++.|.+|++ +|.++.++.+...++|+.++|.+.+++.+..||+..|.+.++..+++
T Consensus 103 ~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~ 181 (493)
T PRK15462 103 LYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAG 181 (493)
T ss_pred HHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Confidence 22222222233322 2344456899999875 69999999999999999999999999999999999998876655554
Q ss_pred HHHH
Q 014286 401 VAFV 404 (427)
Q Consensus 401 ~~~~ 404 (427)
.+..
T Consensus 182 li~~ 185 (493)
T PRK15462 182 LVIF 185 (493)
T ss_pred HHHH
Confidence 4443
No 141
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.40 E-value=1.6e-11 Score=113.43 Aligned_cols=157 Identities=15% Similarity=0.084 Sum_probs=114.1
Q ss_pred hHHHHhHHHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
...++..+++.++.|.+... ......+...+..++.|+++||+|||+.+..+..+..++.+.+....+ .
T Consensus 28 ~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~--------~ 99 (400)
T PRK11646 28 VVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHE--------P 99 (400)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhcc--------H
Confidence 33444445556778888774 444445566667889999999999999999999988888877665322 2
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
+...+...+.+.+.+ ...|...+++.|.+|+++|+++.|+.+...++|..++|.+.+.+. ..||+..|++.+++.++.
T Consensus 100 ~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~ 177 (400)
T PRK11646 100 WLLWLSCILSGLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLA 177 (400)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 333333344444333 234555558889999999999999999999999999999999998 679999998887777666
Q ss_pred HHHHHHhccC
Q 014286 401 VAFVKRNVVE 410 (427)
Q Consensus 401 ~~~~~~~~~~ 410 (427)
.++.....++
T Consensus 178 ~i~~~~~~~~ 187 (400)
T PRK11646 178 AAFNAWLLPA 187 (400)
T ss_pred HHHHHHhCCc
Confidence 5554455554
No 142
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=1.1e-11 Score=117.36 Aligned_cols=159 Identities=14% Similarity=0.004 Sum_probs=118.8
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
........|.+.++.|.+.. +......++..++.++.|+++||+|||+.+..+..+..++.+......+
T Consensus 26 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~-------- 97 (471)
T PRK10504 26 TTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGT-------- 97 (471)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCC--------
Confidence 34455567888888898876 4556666777889999999999999999998887777776665544321
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
.+...+...+.+.+.+. ..+....++.|.+|+++|+++.|+.+...++|..++|.+.|.+.+..||++.|.+...+..+
T Consensus 98 ~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l 176 (471)
T PRK10504 98 LNELLLARVLQGVGGAM-MVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGII 176 (471)
T ss_pred HHHHHHHHHHHHhhhHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 22333444444444433 34555668889999999999999999999999999999999999999999999888777766
Q ss_pred HHHHHHHhccC
Q 014286 400 AVAFVKRNVVE 410 (427)
Q Consensus 400 ~~~~~~~~~~~ 410 (427)
..++.....++
T Consensus 177 ~~~~~~~~~~~ 187 (471)
T PRK10504 177 GAIATLMLMPN 187 (471)
T ss_pred HHHHHHHhCCC
Confidence 66665555444
No 143
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.40 E-value=2.1e-12 Score=117.53 Aligned_cols=155 Identities=19% Similarity=0.172 Sum_probs=116.5
Q ss_pred HHHhHH-HHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhH
Q 014286 246 IFYFSS-SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLY 321 (427)
Q Consensus 246 ~~~~~~-~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (427)
.....+ .+.++.|.+.. +......++..++.++.|+++||+|||+.+..+.++.+++..+..+..+ .+
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--------~~ 86 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASN--------FW 86 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCC--------HH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhh--------HH
Confidence 334455 66677777766 5666777888999999999999999999999999988888444443211 13
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 014286 322 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 401 (427)
..++..++.+.+.+ ...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..|++.+++.++..
T Consensus 87 ~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (352)
T PF07690_consen 87 LLLIARFLLGIGSG-FFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAA 165 (352)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHH
T ss_pred HHhhhccccccccc-cccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhh
Confidence 34444444444443 33555666999999999999999999999999999999999999988899999999999888887
Q ss_pred HHHHHhcc
Q 014286 402 AFVKRNVV 409 (427)
Q Consensus 402 ~~~~~~~~ 409 (427)
++...+.+
T Consensus 166 il~~~~~~ 173 (352)
T PF07690_consen 166 ILFILFLP 173 (352)
T ss_dssp HHHHCCC-
T ss_pred hhHhhhhh
Confidence 65434443
No 144
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.40 E-value=2e-11 Score=112.90 Aligned_cols=180 Identities=14% Similarity=0.110 Sum_probs=123.0
Q ss_pred cchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHH
Q 014286 223 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 299 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 299 (427)
+.++..++......+..+ .........|.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+.
T Consensus 5 ~~~~~l~~~~~~~~~~~~-~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQM-AQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHH-HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 334444444444333332 233333345677788888876 4566677888899999999999999999999888888
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014286 300 AVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR 379 (427)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 379 (427)
.++.+......+ .+...+...+.+.+.+. ..+....+..|.++.++++.+.+..+....++..++|.+.+.
T Consensus 84 ~~~~~~~~~~~~--------~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 154 (394)
T PRK11652 84 ILGTLVALFAHS--------LTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGL 154 (394)
T ss_pred HHHHHHHHHHcc--------HHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777766554322 12233333333333322 234444577788888899999999999999999999999999
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHhccCCC
Q 014286 380 LLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 380 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
+.+..||+..|.+.+++.++..++...+.+|++
T Consensus 155 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 155 LTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999899999998887776665555555566643
No 145
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.40 E-value=1.1e-11 Score=115.94 Aligned_cols=144 Identities=22% Similarity=0.260 Sum_probs=110.6
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
.....+..+.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+.++.+++.+...+..+.
T Consensus 34 ~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~------- 106 (426)
T PRK12307 34 FMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGV------- 106 (426)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHH-------
Confidence 34445556777788888766 56666778888999999999999999999999999988888776665432
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGT 395 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 395 (427)
+...+.-.+.+.+.+ ...+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..||+..|++...
T Consensus 107 -~~l~~~r~l~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 107 -IMLTLSRFIVGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred -HHHHHHHHHHHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 233444444444433 23445555889999999999999999999999999999999998888899988876443
No 146
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.40 E-value=1.3e-11 Score=112.12 Aligned_cols=159 Identities=13% Similarity=0.026 Sum_probs=113.7
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.......|.+.++++.+.. +....+.++..++.+..|+++||+|||+.+.........+.. ..... .+.
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~~-------~~~ 79 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLDP-------FNY 79 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHHh-------ccH
Confidence 3444567788888888876 456667788889999999999999998876554443333322 11110 012
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
+..++.-++.+.+.+. .+......+|.+|+++|+++.++.+....+|..+++.+.+.+.++.||+..|.+.+++.++.
T Consensus 80 ~~l~~~R~l~G~g~~~--~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 80 EWLLACQLLAALGQPF--LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHHHhHhHH--HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 3344444444444442 22333356888999999999999999999999999999999999999999999988888777
Q ss_pred HHHHHHhccCCC
Q 014286 401 VAFVKRNVVETK 412 (427)
Q Consensus 401 ~~~~~~~~~~~~ 412 (427)
.++.++..||.+
T Consensus 158 ~~~~~~~lp~~p 169 (368)
T TIGR00903 158 IILVLAALPALP 169 (368)
T ss_pred HHHHHHHcCCCC
Confidence 777777777643
No 147
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.39 E-value=4.8e-13 Score=118.22 Aligned_cols=182 Identities=13% Similarity=0.045 Sum_probs=141.3
Q ss_pred HHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHH
Q 014286 229 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 305 (427)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 305 (427)
.....+....+..--..+....+...+.++.++. ++.....+...+.++++|++.||++||+++.+|..+-.++.+.
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~ 114 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFA 114 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHH
Confidence 3333343443333444555556666677777766 7888888999999999999999999999999999999988888
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 014286 306 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 385 (427)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 385 (427)
..+...+ |..+++-.+.+.+-+ ...|+..++++|.+|.++|+++.++++....+|..+|-...+.+.+..+
T Consensus 115 ~~fs~~F--------wq~~l~R~~vGiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 115 SGFSNHF--------WQVLLCRGFVGIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHH--------HHHHHHHHHhccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 8876432 455555555555554 4567777799999999999999999999999999999888888877777
Q ss_pred -cchhHHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Q 014286 386 -PQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEI 419 (427)
Q Consensus 386 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (427)
|++.|.+.+++.++..++..++.+|.+++..++.
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~ 220 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEV 220 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCccccccccc
Confidence 9999999999999999888888887765443433
No 148
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.39 E-value=2.9e-11 Score=112.43 Aligned_cols=157 Identities=16% Similarity=0.100 Sum_probs=114.1
Q ss_pred HHHHhHHHHHHhcCCChh--------HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCC
Q 014286 245 AIFYFSSSVFKSAGLSSG--------LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPG 316 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
....+.|.+.++.|.+.. .......+...++.++.|+++||+|||+.+..+.....++.+++....+
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~----- 106 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQN----- 106 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 334456666677776632 3455666778888999999999999999999888877777766554322
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Q 014286 317 SASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTF 396 (427)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 396 (427)
.+..++...+.+.+. +..+....++.+.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..|.+.+++
T Consensus 107 ---~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (408)
T PRK09874 107 ---IWQFLILRALLGLLG--GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASV 181 (408)
T ss_pred ---HHHHHHHHHHHHHhh--hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 123333333333322 234455557788889999999999999999999999999999999999999999888887
Q ss_pred HHHHHHHHHHhccCC
Q 014286 397 CLMAVAFVKRNVVET 411 (427)
Q Consensus 397 ~~~~~~~~~~~~~~~ 411 (427)
.++..+......+++
T Consensus 182 ~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 182 LFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHhccC
Confidence 777666665555543
No 149
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.39 E-value=2.1e-12 Score=118.77 Aligned_cols=159 Identities=12% Similarity=0.050 Sum_probs=118.8
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
........|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+..+..++.++..+..+
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-------- 82 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS-------- 82 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh--------
Confidence 33444556777778888776 5666777888899999999999999999999999888888877766542
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchhHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGL-LFLRLLEQLGPQLLYSIFGTFCL 398 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~-~~g~l~~~~g~~~~~~~~~~~~~ 398 (427)
.+..++...+.+.+.+ ...+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+..+|+..|.+.+++.+
T Consensus 83 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 83 LWVMAALWALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred HHHHHHHHHHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 1233344444444333 334556668999999999999999999999999999994 66666677889999888887777
Q ss_pred HHHHHHHHhccC
Q 014286 399 MAVAFVKRNVVE 410 (427)
Q Consensus 399 ~~~~~~~~~~~~ 410 (427)
+..++.....++
T Consensus 162 ~~~~~~~~~~~~ 173 (379)
T TIGR00881 162 IVSLICFLLLRD 173 (379)
T ss_pred HHHHHHheeeCC
Confidence 666655555554
No 150
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.38 E-value=2.5e-11 Score=112.43 Aligned_cols=152 Identities=18% Similarity=0.040 Sum_probs=105.4
Q ss_pred HhHH-HHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 014286 248 YFSS-SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 323 (427)
Q Consensus 248 ~~~~-~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (427)
...+ ++.++.|.+.. .......++..+++++.|+++||+|||+++..+.++.+++.+.+..............+..
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 3444 45567787766 5666677888899999999999999999999988877776555443321110001112233
Q ss_pred HHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 324 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
++..++.+.+.+.. .+....+..|.+|+++|+++.++......+|..+++.+.+.+.+..||+..+.+.+++.++.
T Consensus 116 ~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 116 LLGRLLLGIGESLA-GTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHHHhhHHhh-cchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 33344444444433 34444477888999999999999999889999999999999999999988776655554433
No 151
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.36 E-value=1.7e-11 Score=112.68 Aligned_cols=155 Identities=17% Similarity=0.148 Sum_probs=117.8
Q ss_pred HhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHH
Q 014286 248 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 324 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (427)
...|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+.++.+++...+....+. +...
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~--------~~~~ 83 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTI--------DQLI 83 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccH--------HHHH
Confidence 345566677888766 45666778888999999999999999999999988888887777654321 2333
Q ss_pred HHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 014286 325 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
....+.+.+.+. ..+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||+..|.+.+++.++..++.
T Consensus 84 ~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 84 YMRFLHGLAAAA-ASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 333333433332 2344555889999999999999999999999999999999999999999999988888777776666
Q ss_pred HHhccCC
Q 014286 405 KRNVVET 411 (427)
Q Consensus 405 ~~~~~~~ 411 (427)
....+|+
T Consensus 163 ~~~~~~~ 169 (377)
T PRK11102 163 FFFIPET 169 (377)
T ss_pred HHhCCcc
Confidence 5555554
No 152
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.36 E-value=1.9e-11 Score=114.86 Aligned_cols=154 Identities=16% Similarity=0.110 Sum_probs=110.4
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.....+.+.+.++.|.+.. +......+...++.++.|+++||+|||+.+..+.++..++.+++.+..+.
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-------- 107 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNV-------- 107 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhH--------
Confidence 3345567777888888766 44445556667788899999999999999998888888777766554321
Q ss_pred HHHHHHH-HHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 321 YLSVGGM-LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
+...... ++.+.+.+....+ ...++.+.+| ++|+++.|+.+....+|..++|.+.+.+.+..||+..|++.+++.++
T Consensus 108 ~~l~~~~~~l~G~~~~~~~~~-~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~ 185 (455)
T TIGR00892 108 IELYLTAGFITGLGLAFNFQP-SLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLH 185 (455)
T ss_pred HHHHHHHHHHHHhcchhhhhH-HHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 1222111 2333333332233 3346778776 78999999999999999999999999999999999999999887776
Q ss_pred HHHHHHHh
Q 014286 400 AVAFVKRN 407 (427)
Q Consensus 400 ~~~~~~~~ 407 (427)
..+..++.
T Consensus 186 ~~v~~~~~ 193 (455)
T TIGR00892 186 CCVCGALM 193 (455)
T ss_pred HHHHHHHh
Confidence 65544433
No 153
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.36 E-value=1.7e-11 Score=115.41 Aligned_cols=148 Identities=11% Similarity=0.040 Sum_probs=107.8
Q ss_pred HHhHHHHH-Hh--cCCChh---HHHHHHHHHHHHHHHhHhhhhcc-cCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 247 FYFSSSVF-KS--AGLSSG---LANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 247 ~~~~~~~~-~~--~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
..+++.++ ++ .|.+.. .......+...++.+++|+++|| +|||+++..+.++.+++.+++.+..+
T Consensus 30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~-------- 101 (475)
T TIGR00924 30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIY-------- 101 (475)
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhccc--------
Confidence 33444444 34 677765 56667778888999999999999 89999999999998888877765322
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRI---RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTF 396 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 396 (427)
.+.......+.+.+.+ ...+...++++|.+|+++ |+++.++.+...++|..++|.+.+.+.++.||+..|.+.++.
T Consensus 102 ~~~~~~~~~l~g~g~g-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~ 180 (475)
T TIGR00924 102 PDLIFYGLGTIAVGSG-LFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVG 180 (475)
T ss_pred HhHHHHHHHHHHhccc-cccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 1223333333333332 234555558888887654 888999999999999999999999999999999999887765
Q ss_pred HHHHHHH
Q 014286 397 CLMAVAF 403 (427)
Q Consensus 397 ~~~~~~~ 403 (427)
.+++.+.
T Consensus 181 ~~~~~l~ 187 (475)
T TIGR00924 181 MVIGLLT 187 (475)
T ss_pred HHHHHHH
Confidence 5554433
No 154
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.36 E-value=2.4e-11 Score=115.97 Aligned_cols=145 Identities=17% Similarity=0.116 Sum_probs=110.1
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
.........+.+.+++|.+.. .......++..++.++.|+++||+|||+.+..+.++.+++.+++.+..+.
T Consensus 35 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~------ 108 (496)
T PRK03893 35 DFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGY------ 108 (496)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHH------
Confidence 344555566777788888876 45566677888999999999999999999999888888887776654321
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGT 395 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 395 (427)
+...+...+.+.+.+ +..+....++.|.+|+++|+.+.++.+....+|..++|.+.+.+.+..||+..|.+.+.
T Consensus 109 --~~l~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~ 182 (496)
T PRK03893 109 --WTLFIARLVIGMGMA-GEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGIL 182 (496)
T ss_pred --HHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 233333334443333 33445555889999999999999999999999999999999999999999988876433
No 155
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.35 E-value=8.9e-11 Score=107.49 Aligned_cols=158 Identities=13% Similarity=0.058 Sum_probs=109.8
Q ss_pred hhHHHHhHH-HHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHh-hcCCCCC
Q 014286 243 INAIFYFSS-SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS-SSYIPGS 317 (427)
Q Consensus 243 ~~~~~~~~~-~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 317 (427)
......+.| ++.++.|.+.. +......++..++.++.|+++||+|||+.+..+.++..++.+++.... +
T Consensus 17 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~------ 90 (366)
T TIGR00886 17 WFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQS------ 90 (366)
T ss_pred HHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhh------
Confidence 344445566 46678888876 566677788889999999999999999999999998888887776654 2
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------hccc
Q 014286 318 ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ----------LGPQ 387 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~----------~g~~ 387 (427)
.+...+..++.+.+.+ . .+....++.|.+|+++|+.+.++.....++|..+++.+.+.+.+. .+|+
T Consensus 91 --~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~ 166 (366)
T TIGR00886 91 --YSVLLLLRLFIGIAGG-S-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWG 166 (366)
T ss_pred --HHHHHHHHHHHHHhch-h-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 1233333333343322 2 233455889999999999999999988888888888887776653 3788
Q ss_pred hhH-HHHHHHHHHHHHHHHHhccC
Q 014286 388 LLY-SIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 388 ~~~-~~~~~~~~~~~~~~~~~~~~ 410 (427)
+.+ ...+++..+..++.....++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 167 WAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc
Confidence 888 44344444444444344333
No 156
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.35 E-value=7.5e-12 Score=114.99 Aligned_cols=157 Identities=13% Similarity=0.098 Sum_probs=116.5
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
......+.|.+.++.+.+.. .......++..++.+..|+++||+|||+.+..+.++.+++.+...+..+.
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~------- 91 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSL------- 91 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHH-------
Confidence 33445567888888888876 56677788889999999999999999999999998888888777765542
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
+...+...+.+.+.+.... .......|.+| ++|+++.++......+|..+++++.+.+.+..||+..|.+.+++.++
T Consensus 92 -~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 168 (377)
T TIGR00890 92 -AALYLTYGLASAGVGIAYG-IALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLL 168 (377)
T ss_pred -HHHHHHHHHHhHHHHHHHH-hHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 2333333344444433222 23335667676 67999999999999999888888888888888999999988888777
Q ss_pred HHHHHHHhcc
Q 014286 400 AVAFVKRNVV 409 (427)
Q Consensus 400 ~~~~~~~~~~ 409 (427)
..+..+++.+
T Consensus 169 ~~~~~~~~~~ 178 (377)
T TIGR00890 169 VIVLGAFLIG 178 (377)
T ss_pred HHHHHHHhee
Confidence 7666555544
No 157
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.35 E-value=5.4e-11 Score=112.11 Aligned_cols=160 Identities=12% Similarity=0.039 Sum_probs=109.6
Q ss_pred HHHHHhhhccchhHHHHhHHHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcc-cCccchhhhhhHHHHHHHHHHH
Q 014286 232 STLFALQQLSGINAIFYFSSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQV 307 (427)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~ 307 (427)
........++.+....+...++.++.|.+... ....+.....+..+++|+++|| +|||+++..+.++..++.+.+.
T Consensus 20 ~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~ 99 (489)
T PRK10207 20 FFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG 99 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444455556678877763 3334444555666789999999 9999999999999999888777
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCcc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 014286 308 AASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSR--IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 385 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 385 (427)
+..... ....+...+.+.+.+. ..|...+++.|.+|++ +|+.+.++.+...++|..++|.+.|++.++.|
T Consensus 100 ~~~~~~-------~ll~~~~~l~~ig~g~-~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 100 MSLLKP-------DLIFIALGTIAVGNGL-FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred Hhccch-------hHHHHHHHHHHhcccc-ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 643211 1122333333333332 3455566999999877 45789999999999999999999999999999
Q ss_pred cchhHHHHHHHHHH
Q 014286 386 PQLLYSIFGTFCLM 399 (427)
Q Consensus 386 ~~~~~~~~~~~~~~ 399 (427)
|++.|++.++..++
T Consensus 172 w~~~F~i~~i~~~~ 185 (489)
T PRK10207 172 YSVTYNLCGAGLII 185 (489)
T ss_pred hHHHHHHHHHHHHH
Confidence 99999886554333
No 158
>PRK12382 putative transporter; Provisional
Probab=99.35 E-value=5e-11 Score=110.15 Aligned_cols=144 Identities=15% Similarity=-0.016 Sum_probs=98.5
Q ss_pred HHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 014286 252 SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 328 (427)
Q Consensus 252 ~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
++.++.|.+.. .......+...+++++.|+++||+|||+.+..+.+...++.+..............+.+..++.-.
T Consensus 41 ~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 41 FVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 44567888877 566667778888999999999999999999888776665543322211100001112233344444
Q ss_pred HHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Q 014286 329 MFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTF 396 (427)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 396 (427)
+.+.+.+.. .+...+++.|..|+++|+++.++.......+..++|.+.+.+.+..||+..+.+..+.
T Consensus 121 l~G~~~~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 121 ILGFGESQL-LTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHHHHHHH-HHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 444444432 3334447788899999999999999999999999999999999988988665544433
No 159
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.34 E-value=5.8e-12 Score=113.23 Aligned_cols=152 Identities=16% Similarity=0.202 Sum_probs=112.9
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
..+.+++-..+++.+.... ......-.+.++.-+..+++.+|+|+.+++..++.+..+-++.+....+ +
T Consensus 388 ~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n--------~ 459 (618)
T KOG3762|consen 388 GLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN--------P 459 (618)
T ss_pred HHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC--------c
Confidence 3333444444455553333 3444555667788888999999999999999998888877777665543 3
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVH-WVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
|..+..-++-+...+..+..+.. |++...|++.+.++.++..... .+|-.+|..++|.+.+.+|-+..|.++++.+++
T Consensus 460 W~vLPieilqgit~aliWaa~~s-Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 460 WMVLPIEILQGITHALIWAAIIS-YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLV 538 (618)
T ss_pred hheeeHHHHHHHHHHHHHHHHHH-HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHH
Confidence 55555666667777766666665 9999999999999999987764 478899999999999999999899888887776
Q ss_pred HHHHH
Q 014286 400 AVAFV 404 (427)
Q Consensus 400 ~~~~~ 404 (427)
..++.
T Consensus 539 ~l~~~ 543 (618)
T KOG3762|consen 539 TLALF 543 (618)
T ss_pred HHHHH
Confidence 65544
No 160
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.34 E-value=3.7e-11 Score=106.46 Aligned_cols=160 Identities=14% Similarity=0.108 Sum_probs=101.5
Q ss_pred hhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHh---cCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchh
Q 014286 219 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS---AGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALL 292 (427)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~ 292 (427)
.++++..+...+..+++.. .......|.+.+..+ .|.++. .....+..+.++|+++++++.||+++|+.+
T Consensus 136 ~~~~~~~~l~~~~~f~yvg----~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l 211 (310)
T TIGR01272 136 AFQFTHLVLGALGIFVYVG----AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL 211 (310)
T ss_pred HHhhHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 4444444443333333333 344444455555542 466654 567777888999999999999999998888
Q ss_pred hhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHH
Q 014286 293 QWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFF 372 (427)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 372 (427)
..+..+.+++..+...... ........+.+.+.+. ..|...+...+..|+ +.+++.++. ....+|+++
T Consensus 212 ~~~~~l~~~~~~l~~~~~~---------~~~~~~~~l~g~~~s~-i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i 279 (310)
T TIGR01272 212 AFNAFLAVLLSIGAALTHG---------YVAMWFVLALGLFNSI-MFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAI 279 (310)
T ss_pred HHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchH
Confidence 8777766666543332211 1122233344444443 345545467676674 466777775 677899999
Q ss_pred HHHHHHHHHHHhccchhHHHHH
Q 014286 373 VGLLFLRLLEQLGPQLLYSIFG 394 (427)
Q Consensus 373 ~~~~~g~l~~~~g~~~~~~~~~ 394 (427)
.|.+.|.+.|..|.+..+++..
T Consensus 280 ~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 280 VPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHHHhccchHHHHHHH
Confidence 9999999999999887776443
No 161
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.34 E-value=3.7e-11 Score=111.25 Aligned_cols=157 Identities=15% Similarity=0.015 Sum_probs=102.5
Q ss_pred HhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHH
Q 014286 248 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 324 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (427)
.+.+.+.++.|.+.. .......++..++.++.|++.||+|||+.+..+..+..++.++...... ...+.+...
T Consensus 34 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~l~ 109 (402)
T TIGR00897 34 GWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL----GHANYPLIL 109 (402)
T ss_pred HhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc----cCccHHHHH
Confidence 344555577788766 5667788888999999999999999999999988888777654422111 011122233
Q ss_pred HHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHH-HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 014286 325 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVIN-FFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAF 403 (427)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 403 (427)
....+.+.+.+.. .+.....+.+.+|+++|+++.|+.+...++|. .++|.+.+.+.+..|+...++.......+..++
T Consensus 110 ~~~~i~G~g~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 188 (402)
T TIGR00897 110 LFYGIRGLGYPLF-AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVI 188 (402)
T ss_pred HHHHHHHcchHHH-HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH
Confidence 3333333333222 23333466788899999999999999999986 578998899888888655554443333333333
Q ss_pred HHHhcc
Q 014286 404 VKRNVV 409 (427)
Q Consensus 404 ~~~~~~ 409 (427)
..+..+
T Consensus 189 ~~~~~~ 194 (402)
T TIGR00897 189 ALFSNK 194 (402)
T ss_pred HHhccC
Confidence 333333
No 162
>PRK11043 putative transporter; Provisional
Probab=99.33 E-value=7e-11 Score=109.57 Aligned_cols=150 Identities=15% Similarity=0.091 Sum_probs=109.6
Q ss_pred HHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 014286 250 SSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 326 (427)
Q Consensus 250 ~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
.+.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++........+ .+...+.
T Consensus 29 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~ 100 (401)
T PRK11043 29 FKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVES--------AAQLLVL 100 (401)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcC--------HHHHHHH
Confidence 3455677888776 4566677788899999999999999999999888877777666654332 1233333
Q ss_pred HHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 014286 327 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 406 (427)
..+.+.+.+.. .+....++.|.+|+++++...+..+....++..++|.+.+.+.+..||+..|.+.+++.++..+....
T Consensus 101 ~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 101 RFVQAVGVCSA-AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHhhhHHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 33333332222 23344577888998889999999998899999999999999999999999998888777766555544
Q ss_pred hc
Q 014286 407 NV 408 (427)
Q Consensus 407 ~~ 408 (427)
..
T Consensus 180 ~~ 181 (401)
T PRK11043 180 LK 181 (401)
T ss_pred cC
Confidence 33
No 163
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.33 E-value=6.9e-11 Score=112.00 Aligned_cols=151 Identities=17% Similarity=0.090 Sum_probs=100.6
Q ss_pred hhHHHHhHHHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcc-cCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 243 INAIFYFSSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
+....+...++.++.|.+... .............+++|+++|| +|||+.+..+.++.+++..++.+...
T Consensus 38 y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~------- 110 (500)
T PRK09584 38 YGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGH------- 110 (500)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 333333444555778887763 2222333333445689999999 59999999999888888776654321
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRI--RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTF 396 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 396 (427)
..+...+...+.+.+.+. ..+...++..|.+|+++ +..+.++.+...++|..++|.+.|++.+..||+..|.+.++.
T Consensus 111 ~~~~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~ 189 (500)
T PRK09584 111 DAGIVYMGMATIAVGNGL-FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVG 189 (500)
T ss_pred cHHHHHHHHHHHHHhhhc-ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 112223333334444333 33455558889887543 456788889999999999999999999999999999887754
Q ss_pred HHHHH
Q 014286 397 CLMAV 401 (427)
Q Consensus 397 ~~~~~ 401 (427)
..++.
T Consensus 190 ~~i~~ 194 (500)
T PRK09584 190 MLITV 194 (500)
T ss_pred HHHHH
Confidence 44443
No 164
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.32 E-value=9.7e-11 Score=107.95 Aligned_cols=171 Identities=12% Similarity=0.094 Sum_probs=114.3
Q ss_pred cchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHH
Q 014286 223 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 299 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 299 (427)
|+++.+++..++..+.. .......+...++.+.+.. +....+.+...+..++.|+++||+|||+++..+..+.
T Consensus 3 ~~f~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~ 78 (393)
T PRK11195 3 KGFYAIMAAQFFSALAD----NALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIK 78 (393)
T ss_pred CcHHHHHHHHHHHHHHH----HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHH
Confidence 45555555555544422 2222333344566666554 5666777888899999999999999999999999888
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014286 300 AVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR 379 (427)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 379 (427)
+++.+.+....+ .....++.+.+. ....|...+++.|.+|+++|+++.|+.+....++..+||.++|.
T Consensus 79 ~~~~~~~~~~~~-----------~~~~r~l~G~~~-a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 79 LLGCLLMLFGIH-----------PLLAYGLVGIGA-AAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred HHHHHHHHHHHH-----------HHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777665544321 122222333332 34457777799999999999999999999999999999999999
Q ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 380 LLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 380 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
+.+.. +...+.+.+.+.+++. +..+..||.
T Consensus 147 l~~~~-~~~~~~i~~~~~~~~~-~~~~~l~~~ 176 (393)
T PRK11195 147 LADPH-AEAALAVCALIYLLAA-LFNLFIPRL 176 (393)
T ss_pred HHHHH-HHHHHHHHHHHHHHHH-HHHhcCCCC
Confidence 98854 5555555544443333 333445543
No 165
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.32 E-value=2.9e-11 Score=114.26 Aligned_cols=160 Identities=17% Similarity=0.068 Sum_probs=114.1
Q ss_pred HHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 246 IFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 246 ~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
.....|.+.++++.+.. +....+.++..++.++.|+++||+|||+++..+.++.++..+.+....... ..+.+.
T Consensus 48 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 124 (467)
T PRK09556 48 FKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSG---SVSLGL 124 (467)
T ss_pred hhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcc---cchHHH
Confidence 33446777888888766 566667788889999999999999999999888877777766655432111 112234
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhHHHHHHHHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL---GPQLLYSIFGTFCLM 399 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---g~~~~~~~~~~~~~~ 399 (427)
.++.-.+.+.+.+.. .|....++.|.+|+++||++.|+.+....+|.++++.+...+.+.. +|+..|.+.+++.++
T Consensus 125 l~~~r~l~G~~~~~~-~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~ 203 (467)
T PRK09556 125 MIALWALSGFFQSTG-GPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALI 203 (467)
T ss_pred HHHHHHHHHHHHhcc-chHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHH
Confidence 444444455544444 3555558999999999999999999999999999999887776653 477777777776666
Q ss_pred HHHHHHHhcc
Q 014286 400 AVAFVKRNVV 409 (427)
Q Consensus 400 ~~~~~~~~~~ 409 (427)
..++.+++.+
T Consensus 204 ~~i~~~~~~~ 213 (467)
T PRK09556 204 IGFIGLRYGS 213 (467)
T ss_pred HHHHHHHhCC
Confidence 5555544443
No 166
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.31 E-value=8.6e-10 Score=99.34 Aligned_cols=349 Identities=15% Similarity=0.128 Sum_probs=194.3
Q ss_pred HHHHHHhhhhhccccccc-cchhhhhhhccC----CCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc-chhHHHHHhhH
Q 014286 53 VLVATLSSFLFGYHLGVV-NEPLESISLDLG----FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCAL 126 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~----~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~~~ 126 (427)
+..++..-+...++..-+ ++..-.+..+++ +++++. .-+.+.|..-.-+..+++|+++||+ |+|+++..|.+
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A--~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHA--TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhh--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 334444455554444222 333445555555 766655 5667777766678889999999995 99999999999
Q ss_pred HHHHHHHHHHhhh--hhHHHHHHHHHHhhhccccccceeecccC-----Cch------------------------hhhh
Q 014286 127 PMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTE-----SPH------------------------WLYK 175 (427)
Q Consensus 127 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~-----~~~------------------------~~~~ 175 (427)
++.+|-++.+.+. +...+.++-.+.++|.|..-+....++.| .|| |+..
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999999984 78899999999999999887776666652 111 0000
Q ss_pred cCChHHHHH---------HHHHHhCCC--------chh---------------------h---H---HHH----------
Q 014286 176 KGRTAEAEA---------EFEKLLGGS--------HVK---------------------S---S---LAE---------- 201 (427)
Q Consensus 176 ~~~~~~~~~---------~~~~~~~~~--------~~~---------------------~---~---~~~---------- 201 (427)
+..+..... .+....+.. ..+ . . .+.
T Consensus 181 ~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 260 (498)
T COG3104 181 NYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISI 260 (498)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 000000000 000 0 0 000
Q ss_pred ------HhhhhcCCCCCcchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhc----CCChhHHHHHHHHH
Q 014286 202 ------LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA----GLSSGLANVFVGIA 271 (427)
Q Consensus 202 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~ 271 (427)
..+....++.. ...++++ ..-.+++...++...+-...+.+..|.....++. .+++.+..+...+.
T Consensus 261 ~~~~~~~~~~~~~~~~~-~er~r~~---~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~ 336 (498)
T COG3104 261 LIAIIYFAEAFRSPKVF-DERRRLL---AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFF 336 (498)
T ss_pred HHHHHHHHHHhccCccH-HHHHHHH---HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHH
Confidence 00000000000 0000000 1112222233333333333444455554444332 24555777777777
Q ss_pred HHHHHHhHhhhhcccCcc-------chhhhhhHHHHHHHHHHHHHhhcCC--CCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 272 NLLGSVVAMVLMDKLGRK-------ALLQWSFFSMAVSMAIQVAASSSYI--PGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 272 ~~~~~~~~g~l~d~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
-++.+++..++..|.+++ .-+.++..+++.+++++........ .+..+.++.+...++..++ -....|+.
T Consensus 337 Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~g-EL~iSpvG 415 (498)
T COG3104 337 IILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFG-ELFISPVG 415 (498)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH-HHHhCHHH
Confidence 777777777776664332 1234556666666666655522221 2334555555544444443 44567787
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHH------HHHHhccchhHHHHHHHHHHHHHHHHHhc
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR------LLEQLGPQLLYSIFGTFCLMAVAFVKRNV 408 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 408 (427)
.+++....|+...+.++++.......+..++..+.+. ..+.......|..++...++.........
T Consensus 416 Ls~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 416 LSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 7799999999888888888777777777777766662 34445566677777777766666554433
No 167
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.31 E-value=6.8e-11 Score=111.25 Aligned_cols=184 Identities=19% Similarity=0.159 Sum_probs=129.9
Q ss_pred hhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHH
Q 014286 219 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 298 (427)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 298 (427)
.+|++.++.++.+..+..+..........++.... .......+++.....+-.++.++++|.++||++||++++.+-++
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l-t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~ 84 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL-TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL 84 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 46788999988888887776555444444433221 11222222455555667778889999999999999999998887
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014286 299 MAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFL 378 (427)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g 378 (427)
.++....+.+.... +..+.+.+++..++.+.+.. ...|...+++.|++|+++...+.++.+...++...+||.++|
T Consensus 85 ~~~~~~~L~~l~~~---~~~~~~~Ll~~~fl~g~~~a-~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 85 RALVALLLAVLAFF---GLLSPWLLLILTFLLGIGSA-FFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHh---CcCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 77666555544322 23334444444444444433 346777779999999999999999999999999999999999
Q ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHHh
Q 014286 379 RLLEQLGPQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 379 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
.++...|....|.+.++..++..+.....
T Consensus 161 ~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 161 ILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999889988777666655444433
No 168
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.28 E-value=5.1e-11 Score=92.71 Aligned_cols=135 Identities=19% Similarity=0.187 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhc
Q 014286 267 FVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLL 346 (427)
Q Consensus 267 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (427)
...++..++.+..+++.||+|||+.+..+.....++.+......+ .+.......+.+.+.+. ..+....+.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~-~~~~~~~~~ 76 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN--------ITVLIIARFLQGFGAAF-ALVAGAALI 76 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc--------HHHHHHHHHHHHHHHHH-HHHhHHHHH
Confidence 456778889999999999999999998888777777665554321 22333334444443332 345555588
Q ss_pred cCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 347 PEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 347 ~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
.|.+|+++|+++.++.+....++..++|.+.+.+.+..+|+..+.+.+.+.++..+...+..+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999999998899888888887777776666555443
No 169
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.28 E-value=4.9e-10 Score=103.05 Aligned_cols=164 Identities=9% Similarity=-0.008 Sum_probs=106.2
Q ss_pred chhHHHHhHHHHHH-hcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCC
Q 014286 242 GINAIFYFSSSVFK-SAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGS 317 (427)
Q Consensus 242 ~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
.........+.+.+ +++++.. +...+..+...++++..|++.||+|.|+++..+.++..+..+...+.... ..
T Consensus 49 ~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~---~~ 125 (462)
T PRK15034 49 VWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN---PN 125 (462)
T ss_pred HHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc---cC
Confidence 34444444445444 6888877 45556667777888889999999999999999888888777776654211 01
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH-----HHh--------
Q 014286 318 ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL-----EQL-------- 384 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~-----~~~-------- 384 (427)
.+.+..++...+.+.+ +. ..+.....+++.+|+++||++.|+....+++|..+++.+...+. +..
T Consensus 126 ~s~~~lli~r~l~Gig-g~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~ 203 (462)
T PRK15034 126 TPFGIFIVIALLCGFA-GA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQA 203 (462)
T ss_pred CCHHHHHHHHHHHHHH-HH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 1223344444444443 32 34445558899999999999999998777777776666555433 322
Q ss_pred -----ccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 385 -----GPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 385 -----g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
+++.+..+...+.++..++.++..++
T Consensus 204 ~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 204 DGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 34555556666666666666555544
No 170
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.26 E-value=2.1e-10 Score=107.32 Aligned_cols=157 Identities=12% Similarity=0.016 Sum_probs=101.1
Q ss_pred hhHHHHhHHHHHHhcC---CChh---H---HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcC
Q 014286 243 INAIFYFSSSVFKSAG---LSSG---L---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY 313 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g---~~~~---~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (427)
.....+..+.+.++.+ .+.. . ......++..+++++.|+++||+|||+.+..+..+.+++.++.++.++..
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 117 (432)
T PRK10406 38 FYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYE 117 (432)
T ss_pred HHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCch
Confidence 3345555666666653 2222 1 22333445558999999999999999999999999988888776654321
Q ss_pred CCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH--------HHhc
Q 014286 314 IPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL--------EQLG 385 (427)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~--------~~~g 385 (427)
..........++.-++.+.+.+ +..+...+++.|.+|+++||.+.++.+.....|..+++.+...+. +..|
T Consensus 118 ~~~~~~~~~l~~~R~l~G~g~g-~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 196 (432)
T PRK10406 118 TIGTWAPALLLLARLFQGLSVG-GEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWG 196 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhh-hhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccc
Confidence 0000111122333333343333 234566679999999999999999888777777777776654443 2578
Q ss_pred cchhHHHHHHHHHHH
Q 014286 386 PQLLYSIFGTFCLMA 400 (427)
Q Consensus 386 ~~~~~~~~~~~~~~~ 400 (427)
|+..|.+.++..++.
T Consensus 197 Wr~~F~i~~~~~ll~ 211 (432)
T PRK10406 197 WRIPFALGAVLAVVA 211 (432)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999998766665544
No 171
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.26 E-value=7e-11 Score=111.77 Aligned_cols=147 Identities=14% Similarity=0.048 Sum_probs=108.9
Q ss_pred cCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHH
Q 014286 257 AGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLT 333 (427)
Q Consensus 257 ~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (427)
++.+.. .....+.++..++.+..|++.||+|+|+.+..+.++..++.++....... ..+..++.-++.+.+
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG------GIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc------CchHHHHHHHHHHHh
Confidence 344444 56677778899999999999999999999998888777776665433211 112233333334433
Q ss_pred HhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 334 FALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-GPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 334 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
.+ ...+....++.|.+|+++|+++.|+.+....+|..+++.+.+.+.+.. ||+..|.+.+++.++..++.+...++
T Consensus 145 ~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 145 QG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred cc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 33 334556669999999999999999999999999999999999999984 99999999888777666555554443
No 172
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.26 E-value=2.8e-10 Score=105.05 Aligned_cols=147 Identities=10% Similarity=0.017 Sum_probs=112.3
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.......|.+.++++.+.. +......++..++.+..|++.||+|||+++..+..+.+++.+...+.++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~-------- 97 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQS-------- 97 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcch--------
Confidence 4455667888888998876 56666778888999999999999999999999999999999988875542
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-GPQLLYSIFGTFCLM 399 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~ 399 (427)
+..+..-++.+.+.+... +....++.+.+| ++|+.++|+.......|..+++.+.+.+.++. +|+..+.+.++..++
T Consensus 98 ~~ll~~r~l~Gig~~~~~-~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~ 175 (393)
T PRK09705 98 ALLLSSALLGGVGIGIIQ-AVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVV 175 (393)
T ss_pred HHHHHHHHHHHhHHHHHh-hhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 234444455555555433 344447788887 77999999999999999999999999988875 788777665555443
Q ss_pred H
Q 014286 400 A 400 (427)
Q Consensus 400 ~ 400 (427)
.
T Consensus 176 ~ 176 (393)
T PRK09705 176 A 176 (393)
T ss_pred H
Confidence 3
No 173
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.25 E-value=2.1e-10 Score=109.07 Aligned_cols=144 Identities=16% Similarity=0.075 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhh
Q 014286 266 VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLL 345 (427)
Q Consensus 266 ~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (427)
....++..++.++.|+++||+|||+++..+.++.+++.++.++.++........+...++.-++.+.+.+ +..+....+
T Consensus 64 ~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g-~~~~~~~~~ 142 (490)
T PRK10642 64 SVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVG-GEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhH-hhHHHHHHH
Confidence 3444677789999999999999999999999999999888877654210000000112333334444433 334555669
Q ss_pred ccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH--------HHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 346 LPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL--------EQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 346 ~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
+.|.+|+++||.+.++......+|..+++.+...+. +..||+..|++.+.+.+++ ++.....+|+
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~es 215 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEET 215 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCC
Confidence 999999999999999988887788877776654443 2578999998866554433 3333445554
No 174
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.25 E-value=1.6e-09 Score=95.63 Aligned_cols=312 Identities=16% Similarity=0.117 Sum_probs=182.9
Q ss_pred hhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccc-----hhHHHHH-hhHHHHHHHHHHHhh-----h------
Q 014286 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQL-CALPMIIGASISATT-----R------ 139 (427)
Q Consensus 77 i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~~-----~------ 139 (427)
+..|++++..-. +.+.++..+. ....+.+|+.+|+.+ ||..+++ |.++...+..+..++ .
T Consensus 6 MIvEL~vpA~lv--~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGVPAWLV--ALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhccHHHHH--HHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 456777643333 7777766555 457999999999999 8877654 555555555554432 2
Q ss_pred -hh--H--HHHHHHHHHhhhccccccceeecccCCchhhhhcCChHHHHHHHHHHh------C--------CCchhhH--
Q 014286 140 -NL--I--GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTAEAEAEFEKLL------G--------GSHVKSS-- 198 (427)
Q Consensus 140 -~~--~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~--------~~~~~~~-- 198 (427)
+. + ...+.-.+.|+|.+...+...+++.|. ...+++.+...++.... + .+..+..
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~----~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~ 158 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADL----APEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLI 158 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhc----CCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHH
Confidence 12 2 234456677888887777777777752 22222222222111100 0 0000000
Q ss_pred ------------------H-HHHhh--hhcCCCCC----cchhHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHH
Q 014286 199 ------------------L-AELSK--LDRGDDGD----IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV 253 (427)
Q Consensus 199 ------------------~-~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
. .|.+. ..+.++++ ...+++++.+++.++++...++.....+.--. ..-||=
T Consensus 159 ~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~---iLEPyg 235 (403)
T PF03209_consen 159 QVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDV---ILEPYG 235 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHH---HcCCch
Confidence 0 00000 00011112 23466777788888776665555442221111 112333
Q ss_pred HHhcCCChh---HHHHHHHHHHHHHHHhHhhhhc-ccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHH
Q 014286 254 FKSAGLSSG---LANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLM 329 (427)
Q Consensus 254 ~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (427)
-+.+|++.+ ......+.+.++|-...|++.. |.++++....++....+++.++...... .+.+......++
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~-----~~~~~~~~~~~l 310 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL-----GSPWLFRPGVFL 310 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc-----ccchHHHHHHHH
Confidence 355777776 5677777888888888887766 6777888888888888888776665432 223455566666
Q ss_pred HHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----------ccchhHHHHHHHHHH
Q 014286 330 FVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL----------GPQLLYSIFGTFCLM 399 (427)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------g~~~~~~~~~~~~~~ 399 (427)
++++.+........ .+.+..++++.|..+|.-...+.+...++..+.|.+.|.. +|..+|.+=++..++
T Consensus 311 ~G~g~G~f~vgals-~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~ 389 (403)
T PF03209_consen 311 LGLGNGLFTVGALS-LMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLA 389 (403)
T ss_pred HHHhhhHHHHHHHH-HHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 66666554444444 6667777788999999999999999999999999888742 244455555555444
Q ss_pred HHHHH
Q 014286 400 AVAFV 404 (427)
Q Consensus 400 ~~~~~ 404 (427)
+.++.
T Consensus 390 a~~ll 394 (403)
T PF03209_consen 390 ALVLL 394 (403)
T ss_pred HHHHH
Confidence 44443
No 175
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.24 E-value=2.4e-10 Score=103.84 Aligned_cols=153 Identities=24% Similarity=0.287 Sum_probs=115.6
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
........+.+.++.+.+.. .......++..++.++.|+++||+|||+.+..+..+..++.+......+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~-------- 86 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASS-------- 86 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhcc--------
Confidence 33444555666677777766 5666677888899999999999999999999999888888877665422
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
.+.......+.+.+.+ ...+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.+..+|+..+.+.+++.++
T Consensus 87 ~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (352)
T cd06174 87 LWLLLVGRFLLGLGGG-ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLL 165 (352)
T ss_pred HHHHHHHHHHHHcccc-cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 1233333344443333 234555669999999999999999999999999999999999999998999888887776666
Q ss_pred HHHHH
Q 014286 400 AVAFV 404 (427)
Q Consensus 400 ~~~~~ 404 (427)
..+..
T Consensus 166 ~~~~~ 170 (352)
T cd06174 166 LALLL 170 (352)
T ss_pred HHHHH
Confidence 55443
No 176
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.24 E-value=4.8e-10 Score=103.68 Aligned_cols=155 Identities=14% Similarity=0.116 Sum_probs=113.9
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.......|.+.++.+.+.. +......++..++++..|++.||+|||+.+..+..+.+++..++..... ..+.
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~-----~~~~ 94 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE-----IMNY 94 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh-----hccH
Confidence 4444566788888888876 5777788899999999999999999999999999998888776543321 1112
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE------------------ 382 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~------------------ 382 (427)
+..+...++.+.+.+....+... ++.+..|++++++..++.+....+|..++|.+.+.+..
T Consensus 95 ~~~l~~~~l~G~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~ 173 (410)
T TIGR00885 95 TLFLVGLFILTAGLGFLETAANP-YILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEE 173 (410)
T ss_pred HHHHHHHHHHHhhHHHHHhhhhH-HHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHH
Confidence 33444445555555544333333 77778888999999999999999999999999887753
Q ss_pred --------HhccchhHHHHHHHHHHHHHHH
Q 014286 383 --------QLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 383 --------~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
..+|+.+|.+.+++.++..++.
T Consensus 174 ~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 174 LSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2358888888887766654443
No 177
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.24 E-value=4.6e-10 Score=106.75 Aligned_cols=147 Identities=15% Similarity=0.115 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCC---CCC-chhHHHHHHHHHHHHHHhhcc
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI---PGS-ASLYLSVGGMLMFVLTFALGA 338 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~ 338 (427)
+......++..++.++.|+++||+|||+++..+..+..++.+...+...... ..+ ...+..++.-++.+.+.+. .
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~ 137 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGL-A 137 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhH-H
Confidence 5677778899999999999999999999999998888777666554211000 001 1112223333444444433 3
Q ss_pred cchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH--------HHhccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 339 GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL--------EQLGPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
.+...++++|.+|+++||.++++.+....+|..+++.+.+.+. +..||+..|++.++..++..+. .++.||
T Consensus 138 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~ 216 (479)
T PRK10077 138 SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPE 216 (479)
T ss_pred hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 4555568999999999999999999998899888877655443 3468999998877766665443 455666
Q ss_pred C
Q 014286 411 T 411 (427)
Q Consensus 411 ~ 411 (427)
+
T Consensus 217 s 217 (479)
T PRK10077 217 T 217 (479)
T ss_pred C
Confidence 4
No 178
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.23 E-value=1.5e-10 Score=110.02 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
.......++..++.++.|+++||+|||+.+..+.++..++.++....... ...+..++...+.+.+.+.. .+..
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~-~~~~ 148 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFA-----LSVEMLIVGRVLLGIGVGIA-SALV 148 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccc-----cchHHHHHHHHHHHhhhhHH-HhHH
Confidence 67777888899999999999999999999999888888877776543321 11123444444445444433 3455
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF---LRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
..++.|.+|+++|+.+.++.+....+|..+++.+. +...+..||+..|.+.+...++.. +..++.+|+
T Consensus 149 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~ 219 (481)
T TIGR00879 149 PMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPES 219 (481)
T ss_pred HHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCC
Confidence 56899999999999999999999999999999988 555566789988888555544443 333445553
No 179
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.23 E-value=4.7e-10 Score=103.08 Aligned_cols=156 Identities=13% Similarity=-0.035 Sum_probs=102.1
Q ss_pred HHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhh-hhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 247 FYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQW-SFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 247 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
+....++.++.|.+.. .......+...+..++.|+++||+|||+.+.. +.....++.++.....+ .+.
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 89 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRN--------YFL 89 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcch--------HHH
Confidence 3334445567788776 44455566777888999999999999887654 44444444444443221 122
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcCCccchhhH--HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKA--MAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~--~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
.++...+.+.. .....|....+..|..|++.|+.+ .+.......+|..++|.+.+.+.+..||+..|++.+.+.++.
T Consensus 90 l~~~~~~~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~ 168 (375)
T TIGR00899 90 LLVLGVLLSSF-ASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLC 168 (375)
T ss_pred HHHHHHHHHhh-hhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 22222222222 223345555577777776666644 577777888999999999999999999999999988877777
Q ss_pred HHHHHHhccCC
Q 014286 401 VAFVKRNVVET 411 (427)
Q Consensus 401 ~~~~~~~~~~~ 411 (427)
.++.++..||.
T Consensus 169 ~~~~~~~~~~~ 179 (375)
T TIGR00899 169 GVLVWLFLPSY 179 (375)
T ss_pred HHHHHHhCCCc
Confidence 66665656653
No 180
>PRK15075 citrate-proton symporter; Provisional
Probab=99.21 E-value=2.7e-10 Score=106.62 Aligned_cols=162 Identities=17% Similarity=0.092 Sum_probs=103.1
Q ss_pred HHHHHhhhccchhHHHHhHHHHHHhcCCChhH----HHHHH-----HHHHHHHHHhHhhhhcccCccchhhhhhHHHHHH
Q 014286 232 STLFALQQLSGINAIFYFSSSVFKSAGLSSGL----ANVFV-----GIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVS 302 (427)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~-----~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 302 (427)
..+..+....-........|.+.++++.+... ..... .+...++.++.|++.||+|||+.+..+..+..++
T Consensus 20 ~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~ 99 (434)
T PRK15075 20 VTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHH
Confidence 33333333334556667788888888765541 11111 1222467889999999999999999999988888
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH-
Q 014286 303 MAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL- 381 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~- 381 (427)
.+++.+..+............++.-++.+.+.+.. .+....++.|.+|+++|+++.++.+...++|..+++.+++.+.
T Consensus 100 ~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~-~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~ 178 (434)
T PRK15075 100 TLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVE-LGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQ 178 (434)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHhhcccccc-HHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777654321000000011222233333333322 3334458999999999999999999988888888887776653
Q ss_pred -------HHhccchhHHHHH
Q 014286 382 -------EQLGPQLLYSIFG 394 (427)
Q Consensus 382 -------~~~g~~~~~~~~~ 394 (427)
+..||+..|++..
T Consensus 179 ~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 179 WLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred hCCHHHHhccchHHHHHHHH
Confidence 4678998887643
No 181
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.20 E-value=1.2e-09 Score=104.18 Aligned_cols=145 Identities=17% Similarity=0.149 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
.......++.+++.++.|+++||+|||+.+..+.++..++.++........ .....+..++.-++.+.+.+.. .+..
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~r~l~G~~~g~~-~~~~ 136 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSS--PKSVMATLCFWRFWLGVGIGGD-YPLS 136 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcc--cchHHHHHHHHHHHHHHHHhhh-hHHH
Confidence 567777888999999999999999999999998888888777665543210 0011233444444555544433 3455
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HhccchhHHHHHHHHHH
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-----------------------QLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-----------------------~~g~~~~~~~~~~~~~~ 399 (427)
..++.|.+|++.|+++.++.+....+|..+++.+...+.. ..+|+..+.+.++..++
T Consensus 137 ~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i 216 (502)
T TIGR00887 137 AIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALL 216 (502)
T ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHH
Confidence 5699999999999999999999999999999988766542 13688888665555444
Q ss_pred HHHHHHHhccCC
Q 014286 400 AVAFVKRNVVET 411 (427)
Q Consensus 400 ~~~~~~~~~~~~ 411 (427)
. ++..++.||+
T Consensus 217 ~-~~~~~~lpES 227 (502)
T TIGR00887 217 A-LYFRLTIPET 227 (502)
T ss_pred H-HHHHHhCCCC
Confidence 3 3334566775
No 182
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.19 E-value=2.7e-10 Score=98.78 Aligned_cols=94 Identities=20% Similarity=0.275 Sum_probs=79.4
Q ss_pred ccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHH
Q 014286 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (427)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 149 (427)
-+|.+-.+-+++|++..+. +.+....+....+..++.|.++||+|||+.-+..+++++++++ +-..++++.++++|+
T Consensus 53 QGpY~Y~LY~~yg~~~~qI--a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRv 129 (354)
T PF05631_consen 53 QGPYLYALYESYGFSEHQI--AILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRV 129 (354)
T ss_pred hcchhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHH
Confidence 3555555667899876666 8999999999999999999999999999999999999999996 556689999999999
Q ss_pred HHhhhccccccceeecc
Q 014286 150 VVGTGMGLGPTVAALYV 166 (427)
Q Consensus 150 l~G~~~g~~~~~~~~~i 166 (427)
+.|++.+..+..--++.
T Consensus 130 lgGiaTSLLfS~FEsW~ 146 (354)
T PF05631_consen 130 LGGIATSLLFSAFESWM 146 (354)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999988777655443
No 183
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=8.9e-10 Score=96.97 Aligned_cols=161 Identities=14% Similarity=0.017 Sum_probs=121.0
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
.+.......+.+.++++++++ ++..+..+.+.+.++..|.+.||+|.|+....+.++..+..+.+.+.....
T Consensus 29 VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~----- 103 (417)
T COG2223 29 VWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP----- 103 (417)
T ss_pred HHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC-----
Confidence 455555556666688899888 455666677778889999999999999999999999888888877765432
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cchhHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG---PQLLYSIFGT 395 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g---~~~~~~~~~~ 395 (427)
+.+..+++.++. +.+.+...+...++++.+|+|++|.+.|++. .+|+|..+...+...+....| |+....+...
T Consensus 104 ~~~~ll~~gll~--G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~ 180 (417)
T COG2223 104 STWQLLVIGLLL--GLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVV 180 (417)
T ss_pred chHHHHHHHHHH--hcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 112333332222 2333344555558999999999999999999 999999999999999999888 8888888877
Q ss_pred HHHHHHHHHHHhccC
Q 014286 396 FCLMAVAFVKRNVVE 410 (427)
Q Consensus 396 ~~~~~~~~~~~~~~~ 410 (427)
..++..+..++...+
T Consensus 181 ~l~v~~v~~~~~~~d 195 (417)
T COG2223 181 ALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHhCC
Confidence 777777777666543
No 184
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.18 E-value=9e-10 Score=102.77 Aligned_cols=181 Identities=13% Similarity=0.057 Sum_probs=104.9
Q ss_pred hhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhh
Q 014286 219 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 295 (427)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 295 (427)
.++++.++...+..++..+.. ....+++..++.++.|.+.. .......+...+++++.|+++||+|||+.+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~ 82 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFIW---SSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWI 82 (420)
T ss_pred hhcCcchHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 345566666555444444322 23344445555556888876 567777888899999999999999999998776
Q ss_pred hHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhccc---chhhhhccCcCCccchhhHHHHHHHHHHHHHHH
Q 014286 296 FFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG---PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFF 372 (427)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 372 (427)
..+.+++...+....... ... ........+.....+.... +....+..+ .+ ++++...|..+....+|..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~g~~~g~~~~~~~~g~~i 156 (420)
T PRK09528 83 ISGLLVLFGPFFIYVFAP---LLQ-YNILLGAIVGGIYLGFGFLAGAGAIEAYIER-VS-RRSGFEYGRARMWGSLGWAL 156 (420)
T ss_pred HHHHHHHHHHHHHHHHHH---HHH-HHHHHHHHHHHHHhhhhhccchhhhhhHHHH-HH-hhccccchhhHHhhhHHHHH
Confidence 555444332211110000 000 0011111111111111111 122212222 22 45677888999999999999
Q ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 373 VGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 373 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
+|.+.|.+.+ .+|+..|++.++++++..++.+...+
T Consensus 157 ~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 157 CAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccc
Confidence 9999999887 48888888877777666555544433
No 185
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.18 E-value=9.4e-10 Score=115.62 Aligned_cols=186 Identities=16% Similarity=0.071 Sum_probs=114.1
Q ss_pred HhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHH-hcCCChh----HHHHHHHHHHHHHHHhHhhhhcccCccch
Q 014286 217 EELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLSSG----LANVFVGIANLLGSVVAMVLMDKLGRKAL 291 (427)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~ 291 (427)
.++++++.++.++...++..+........+..+..+... ..+.+.. +......+..++.++++|+++||+|||++
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 346677777777766666555433223333333332222 2222212 44555667778889999999999999997
Q ss_pred hhhhhHHHHHHH--HHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHH
Q 014286 292 LQWSFFSMAVSM--AIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVI 369 (427)
Q Consensus 292 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 369 (427)
+.....+..+.. .++.... .+.+..++..++.+.+.+ ...|...+++.+.+|+++++.++|+.++...+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-------~s~~~l~~~~~l~gi~~a-~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig 156 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFHL-------NSVPLLFAALFLMGIHSA-LFGPIKYSILPDHLNKDELLGANALVEAGTFIA 156 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHH-hhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence 644222222111 1111111 112344444444444433 446777779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 370 NFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 370 ~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
.++||.++|.+.+..||...|...+++.++ .++..+..++.
T Consensus 157 ~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (1140)
T PRK06814 157 ILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKT 197 (1140)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCC
Confidence 999999999999999998887433333333 33343444443
No 186
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=7.4e-11 Score=102.38 Aligned_cols=141 Identities=16% Similarity=0.105 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
+++....+.+++.+++.|.+.||+|+|..+.+|.+.+..+.+++++.... +..+++=.+-+.+.+.....-.
T Consensus 110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy--------~~l~vAR~LQgvgsA~~~tsgl 181 (464)
T KOG3764|consen 110 LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSY--------PMLFVARSLQGVGSAFADTSGL 181 (464)
T ss_pred HHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchh--------HHHHHHHHHhhhhHHHHHhhhH
Confidence 67788889999999999999999999999999999999999998876543 3555556666666655444444
Q ss_pred hhhccCcCCccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCCC
Q 014286 343 SLLLPEIFPSRI-RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 343 ~~~~~~~~p~~~-~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
+++++.+|.+. |++++|+.-.+..+|..+||+++|.+++..|++.+|+++++++++-..+.++..+.++
T Consensus 182 -amlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 182 -AMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred -HHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc
Confidence 48899998765 6999999999999999999999999999999999999999999998877766655443
No 187
>PRK09952 shikimate transporter; Provisional
Probab=99.17 E-value=9.6e-10 Score=102.92 Aligned_cols=129 Identities=19% Similarity=0.052 Sum_probs=88.6
Q ss_pred HHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCc
Q 014286 270 IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEI 349 (427)
Q Consensus 270 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (427)
++..+++++.|+++||+|||+.+..+..+.+++.++..+.++.........+..+..-.+.+.+.+. ..+....++.|.
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~-~~~~~~~~~~e~ 153 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGG-EWGGAALLAVES 153 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcc-cHHHHHHHHHHh
Confidence 4456788889999999999999999999888888877765432100000011122223333333332 234445699999
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH--------HhccchhHHHHHHHHHH
Q 014286 350 FPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE--------QLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 350 ~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~--------~~g~~~~~~~~~~~~~~ 399 (427)
+|+++|+...+..+....+|..+++.+...+.. ..||+..|.+.++..++
T Consensus 154 ~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 154 APKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 999999999999888888888888777766543 46899999877665443
No 188
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.17 E-value=2.7e-10 Score=98.35 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
.+...+++..++.++..|.++||+|||+++.++.+..++...+.+...++ ..++. .=+..+..-+...+.
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F---------~afv~-aR~l~Gi~kgnl~v~ 141 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNF---------AAFVL-ARFLGGIFKGNLSVI 141 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHH---------HHHHH-HHHhhhhccCchHHH
Confidence 67778889999999999999999999999999999998887777765542 11111 122233333455666
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 382 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 382 (427)
.++++|++++++|+.+++.+++...+|.++||.++|++..
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 7799999999999999999999999999999999999987
No 189
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.16 E-value=5.5e-10 Score=108.41 Aligned_cols=182 Identities=16% Similarity=-0.012 Sum_probs=123.6
Q ss_pred HHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHH
Q 014286 227 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 303 (427)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 303 (427)
.+++...+..+.............+.+.++++++.. ++...+.++..++.++.+++.||.+||+.+.++.++.+++.
T Consensus 33 ~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 33 VFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 333444434444433344555556777777887765 56777888999999999999999999999999999999998
Q ss_pred HHHHHHhhcCC------------------------C----------------CC--c-hhHHHHHHHHHHHHHHhhcccc
Q 014286 304 AIQVAASSSYI------------------------P----------------GS--A-SLYLSVGGMLMFVLTFALGAGP 340 (427)
Q Consensus 304 ~~~~~~~~~~~------------------------~----------------~~--~-~~~~~~~~~~~~~~~~~~~~~~ 340 (427)
++.++...... . .. . .....+++-++.+++.+ ...+
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~-~~~~ 191 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT-PIFP 191 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC-cchh
Confidence 88776531100 0 00 0 11222333333333332 3345
Q ss_pred hhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------ccchhHHHHHHHHH
Q 014286 341 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL----------------------GPQLLYSIFGTFCL 398 (427)
Q Consensus 341 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------------------g~~~~~~~~~~~~~ 398 (427)
...+++.|.+|+++|+.+.|+.+....+|..+|+.+++.+.+.+ +|+..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 66679999999999999999999999999999999999887643 15566777777776
Q ss_pred HHHHHHHHhccC
Q 014286 399 MAVAFVKRNVVE 410 (427)
Q Consensus 399 ~~~~~~~~~~~~ 410 (427)
+.++..+ +.++
T Consensus 272 l~~v~l~-~~p~ 282 (633)
T TIGR00805 272 LTSIPFF-FFPK 282 (633)
T ss_pred HHHHHHH-hCcc
Confidence 6655443 3443
No 190
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.15 E-value=1.3e-09 Score=100.35 Aligned_cols=134 Identities=16% Similarity=0.076 Sum_probs=99.4
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
.......+.|.+.++.|.+.. .......++..++.++.|+++||+|||+.+..+..+.+++.....+..+
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~------- 93 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVG------- 93 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 445555667788888888766 5677777888999999999999999999999998888888777665432
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL 384 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 384 (427)
.+..++..++.+.+.+.. .+.....+.+..|+++|+++.+..+...++|..++|.+.+.+.+..
T Consensus 94 -~~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 94 -FWSWLAWRFVAGIGCAMI-WVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred -HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 233444444444444322 3333335567778889999999999999999999999999887653
No 191
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.15 E-value=2.8e-10 Score=107.02 Aligned_cols=150 Identities=14% Similarity=0.164 Sum_probs=109.5
Q ss_pred HhHHHHHHhcCCChh--HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHH
Q 014286 248 YFSSSVFKSAGLSSG--LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 325 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (427)
..++++..+.|-+.. +......++..++.++.|+++|.+|||..++.+.++..++.++.+...+. ...+.
T Consensus 65 ~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~--------~~~ia 136 (599)
T PF06609_consen 65 SILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNM--------NTFIA 136 (599)
T ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcH--------HHHHH
Confidence 335667777777665 66677788888999999999999999999999999999999988765443 24455
Q ss_pred HHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Q 014286 326 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
+..+.+.+.+ ........++|..|.+.|+.+.++.....-.....++.+...+..+.+|++.|++.++...++.+...
T Consensus 137 g~~l~GvgaG--~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 137 GMVLYGVGAG--VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHhhH--HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 5555555443 33344556899999999988877766554444556777766666667899999998887777665544
Q ss_pred Hh
Q 014286 406 RN 407 (427)
Q Consensus 406 ~~ 407 (427)
++
T Consensus 215 ~f 216 (599)
T PF06609_consen 215 FF 216 (599)
T ss_pred HH
Confidence 33
No 192
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.15 E-value=1.9e-09 Score=98.35 Aligned_cols=160 Identities=14% Similarity=0.040 Sum_probs=107.5
Q ss_pred HHHHhHHHHHHhcCCChhHHHHHH--HHHHHHHHHhHhhhhccc-----Cccchh-hhhhHHHHHHHHHHHHHhhcCCCC
Q 014286 245 AIFYFSSSVFKSAGLSSGLANVFV--GIANLLGSVVAMVLMDKL-----GRKALL-QWSFFSMAVSMAIQVAASSSYIPG 316 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~g~l~d~~-----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
......|.+.++.|.+........ .+...+ .++.|+++||+ |||+.+ ..+.+..+++...+.+...
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----- 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----- 79 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-----
Confidence 344556778888899988444433 333333 78999999997 788864 5555555555444443221
Q ss_pred CchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------cch
Q 014286 317 SASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--------PQL 388 (427)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--------~~~ 388 (427)
....+.......+.. .......+...+++.|.+|+++|+.+.|+......+|..+++.+.+.+.+..| |+.
T Consensus 80 ~~~l~~l~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 80 STDLPLLAGLAFLIA-FFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred chhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 112222222222222 22223345566689999999999999999999999999999999999998888 999
Q ss_pred hHHHHHHHHHHHHHHHHHhccCC
Q 014286 389 LYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
.|.+.+++.++..+...+..+|.
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccCC
Confidence 99888887766655554445554
No 193
>PRK10133 L-fucose transporter; Provisional
Probab=99.15 E-value=3e-09 Score=99.31 Aligned_cols=134 Identities=13% Similarity=0.064 Sum_probs=97.6
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
.......+.|.+.++++.+.. +....+.++..++.+..|++.||+|||+++..+..+..++.+++..... ..
T Consensus 41 ~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~-----a~ 115 (438)
T PRK10133 41 ANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-----IM 115 (438)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh-----cC
Confidence 345566678888888998877 5667788899999999999999999999999999999888876532111 11
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL 381 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 381 (427)
+.+..++..++.+.+.+........ ++.|..|++++....++.+....+|..+++.+.+.+.
T Consensus 116 ~~~~ll~~r~l~G~g~g~~~~~~~~-~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 116 NYTLFLVGLFIIAAGLGCLETAANP-FVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhHHH-HHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234445555555555544444333 6667767666666899999999999999998877654
No 194
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.14 E-value=4.9e-09 Score=96.83 Aligned_cols=157 Identities=11% Similarity=0.011 Sum_probs=96.3
Q ss_pred HHHhHHHHHHhcCCChhHHHHH---HHH-HHHHHHHhHhhhhcccCccchhh-hhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 246 IFYFSSSVFKSAGLSSGLANVF---VGI-ANLLGSVVAMVLMDKLGRKALLQ-WSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~~---~~~-~~~~~~~~~g~l~d~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.+...+++.+++|.+....... ..+ +...+.+.+++ .||+|||+.+. .+.+...++..++.+....
T Consensus 35 ~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~-------- 105 (393)
T PRK15011 35 TPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNY-------- 105 (393)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHH--------
Confidence 3444455567788887743333 233 44455555666 99999988654 4444444444444433221
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIR--AKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCL 398 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 398 (427)
+..++...+.+. ......|....+..+..+++.| +...++.+....+|..++|++.+.+.++.||+..|++.++..+
T Consensus 106 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~ 184 (393)
T PRK15011 106 FVLLFVGVFLSS-FGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFI 184 (393)
T ss_pred HHHHHHHHHHHH-HHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHH
Confidence 222222222222 2223455666566675554444 3345777888899999999999999999999999998888777
Q ss_pred HHHHHHHHhccCCC
Q 014286 399 MAVAFVKRNVVETK 412 (427)
Q Consensus 399 ~~~~~~~~~~~~~~ 412 (427)
+..+..+...||.+
T Consensus 185 ~~~~~~~~~~~~~~ 198 (393)
T PRK15011 185 VCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHhhcCccC
Confidence 77666666666543
No 195
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.13 E-value=4.1e-09 Score=97.69 Aligned_cols=179 Identities=13% Similarity=0.034 Sum_probs=114.4
Q ss_pred HHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhc----ccCccchhhhh-hHHHHHHH
Q 014286 232 STLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMD----KLGRKALLQWS-FFSMAVSM 303 (427)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~-~~~~~~~~ 303 (427)
.......++. +.....+.+.+.+..|.+.. .......+..++..++.|+++| |+|||+.++.+ .....+++
T Consensus 10 ~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l 88 (477)
T TIGR01301 10 ASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAV 88 (477)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHH
Confidence 3333333443 44445555667788898877 4555566778888999999999 59999988764 55555555
Q ss_pred HHHHHHhhcCC------CCCchh---HHHHHHHHHHHHHHhhcccchhhhhccCcCCccch--hhHHHHHHHHHHHHHHH
Q 014286 304 AIQVAASSSYI------PGSASL---YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIR--AKAMAVCMSVHWVINFF 372 (427)
Q Consensus 304 ~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~~g~~~ 372 (427)
.++.+...... ...... +..+..+.+..........|. .+++.|.+|+++| +.+.++.+...++|+.+
T Consensus 89 ~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il 167 (477)
T TIGR01301 89 ILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNVL 167 (477)
T ss_pred HHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 55554332110 000111 122233333333333333444 4599999998765 67999999999999999
Q ss_pred HHHHHHHH--HHHh-------------ccchhHHHHHHHHHHHHHHHHHhccCCC
Q 014286 373 VGLLFLRL--LEQL-------------GPQLLYSIFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 373 ~~~~~g~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
++.+.+.. .+.. +.+..|.+.+++.+++.++..+..+|..
T Consensus 168 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 168 GYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 99988865 2222 4566788888888888777777777754
No 196
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.12 E-value=5.7e-09 Score=98.93 Aligned_cols=162 Identities=15% Similarity=0.099 Sum_probs=110.8
Q ss_pred hhHHHHhHHHHHHhcCCChhHHHHHHHHHHH-HHHHhHhhhhccc-----Cccch-hhhhhHHHHHHHHHHHHHhhcCCC
Q 014286 243 INAIFYFSSSVFKSAGLSSGLANVFVGIANL-LGSVVAMVLMDKL-----GRKAL-LQWSFFSMAVSMAIQVAASSSYIP 315 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~g~l~d~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 315 (427)
........|.+.++.|.+.........++.. ++.++.++++||+ |||+. +..+.+..+++...+.+...
T Consensus 28 ~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~---- 103 (491)
T PRK11010 28 LALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEP---- 103 (491)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCC----
Confidence 3444455677788888887744443322222 6889999999999 98875 55666666666655554321
Q ss_pred CCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhccchhHHHHH
Q 014286 316 GSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-QLGPQLLYSIFG 394 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~~~~~~ 394 (427)
..+.+.......+.+.+.+ ...+...++..|.+|+++|+++.++......+|..+++.+.+.+.+ ..||+..|++.+
T Consensus 104 -~~~l~~l~~~~~l~~~~~a-~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a 181 (491)
T PRK11010 104 -GTQLRWLAALAVVIAFCSA-SQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMA 181 (491)
T ss_pred -cchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHH
Confidence 1222233333333333333 3445566689999999999999999999999999999999999988 469999999988
Q ss_pred HHHHHHHHHHHHhccCC
Q 014286 395 TFCLMAVAFVKRNVVET 411 (427)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ 411 (427)
++.++..+..+ ..+|+
T Consensus 182 ~l~ll~~l~~~-~~~e~ 197 (491)
T PRK11010 182 ALLIPCIIATL-LAPEP 197 (491)
T ss_pred HHHHHHHHHHH-hcCCC
Confidence 87766655443 35554
No 197
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.12 E-value=8.6e-12 Score=117.68 Aligned_cols=115 Identities=21% Similarity=0.292 Sum_probs=3.0
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
++..++..+...+..+.....++.+++.|+++.++. |++.+.+-++..+..++..++.+|..|-|.+-.|.+++++++
T Consensus 5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~--G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~ 82 (539)
T PF03137_consen 5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQS--GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGS 82 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHH
Confidence 445555556667777778888999999999987777 999999999999999999999999888889999999999999
Q ss_pred HHHHhhh--------------------------------------------------hhHHHHHHHHHHhhhccccccce
Q 014286 133 SISATTR--------------------------------------------------NLIGMLLGRFVVGTGMGLGPTVA 162 (427)
Q Consensus 133 ~~~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~ 162 (427)
+++++=+ -+..++++.++.|+|....++.+
T Consensus 83 ~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG 162 (539)
T PF03137_consen 83 LLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG 162 (539)
T ss_dssp ---------------------------------------------------------------------SSS--------
T ss_pred HHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce
Confidence 9876510 02347789999999999999999
Q ss_pred eecccCC
Q 014286 163 ALYVTES 169 (427)
Q Consensus 163 ~~~i~~~ 169 (427)
.+|+.|+
T Consensus 163 ~tYiDDn 169 (539)
T PF03137_consen 163 ITYIDDN 169 (539)
T ss_dssp -------
T ss_pred eeeeccc
Confidence 9999953
No 198
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.11 E-value=6.1e-09 Score=94.43 Aligned_cols=137 Identities=15% Similarity=0.071 Sum_probs=109.8
Q ss_pred hhHHHHhHHHHHHhcCCChh----HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCc
Q 014286 243 INAIFYFSSSVFKSAGLSSG----LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
=...++..|++.+++|++.. .+...+..+..+..+.+|+++||+|.|+++..+.+...+..++.++....
T Consensus 42 R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl------ 115 (511)
T TIGR00806 42 RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSV------ 115 (511)
T ss_pred hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 44556667788888898876 46667778888999999999999999999999999888888888876432
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLY 390 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 390 (427)
+...+.-++++.+-+... ....++...+|+++|+++.|+.+....+|.++++++.+. ...+||+...
T Consensus 116 --~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~ 182 (511)
T TIGR00806 116 --WHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYS 182 (511)
T ss_pred --HHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHH
Confidence 344555566666666555 555589999999999999999999999999999999999 5567877543
No 199
>PTZ00207 hypothetical protein; Provisional
Probab=99.11 E-value=3.8e-09 Score=100.08 Aligned_cols=163 Identities=12% Similarity=0.063 Sum_probs=107.0
Q ss_pred hhHHHHhHHHHHHhcCCChhHHHHHHHHHHH--HHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 243 INAIFYFSSSVFKSAGLSSGLANVFVGIANL--LGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
......+.+.+.+++|++......+..++.. ...+..|++.||+|+|+++.++.++..++.++.++...... ..+.
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i--~~s~ 120 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI--EGSV 120 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc--cCcH
Confidence 3344566778888899988743333333222 34457899999999999999999999999988877532110 1223
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
+...+...+.+.+.+...... ...+.+.+| ++||.+.|+......+|+++.+.+...+.. .++...|++.+++.++.
T Consensus 121 ~~l~l~r~l~G~G~~~~~~~~-~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 121 VRLSVYNGLMTLGCMLFDLGA-VVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 333333444444433222233 336677887 779999999999999999865555555444 35667777777777776
Q ss_pred HHHHHHhccC
Q 014286 401 VAFVKRNVVE 410 (427)
Q Consensus 401 ~~~~~~~~~~ 410 (427)
.++...+.+.
T Consensus 198 ~ll~~~~vr~ 207 (591)
T PTZ00207 198 GILAIVFMRL 207 (591)
T ss_pred HHHHHhheeC
Confidence 6666555543
No 200
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.09 E-value=3.4e-09 Score=111.79 Aligned_cols=156 Identities=19% Similarity=0.114 Sum_probs=100.4
Q ss_pred hhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh-----HHHHHHHHHHHHHHHhHhhhhcccCccchhh
Q 014286 219 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-----LANVFVGIANLLGSVVAMVLMDKLGRKALLQ 293 (427)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 293 (427)
.++++.++.++.+.++..+........ ..+.+...++.+.. +...++.++.+++++++|+++||+|||+++.
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~ 81 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKIL---IQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR 81 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHH---HHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH
Confidence 455566666555554443322211222 22223333333322 4555667778889999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHH
Q 014286 294 WSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFV 373 (427)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~ 373 (427)
.+.++.++..++..+.... ...+..++..++.+.+.+ ...+...+++.|.+|+++|+.++|+......+|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg 155 (1146)
T PRK08633 82 IVKLFEVGLTLLIVLAYYL-----GWFWLAFAVTFLLGAQSA-IYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAG 155 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHHHHHH-hhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHH
Confidence 8876665555444333211 112334444444444433 3455666699999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 014286 374 GLLFLRLLEQ 383 (427)
Q Consensus 374 ~~~~g~l~~~ 383 (427)
+.+++.+.+.
T Consensus 156 ~~l~~~l~~~ 165 (1146)
T PRK08633 156 TALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHh
Confidence 9999999876
No 201
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.09 E-value=2.7e-09 Score=98.73 Aligned_cols=162 Identities=16% Similarity=0.136 Sum_probs=96.8
Q ss_pred HHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhH
Q 014286 245 AIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLY 321 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (427)
..++...++.++.|.+.. .......+...++++..|+++||+|||+.+..+....++...................+
T Consensus 21 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (396)
T TIGR00882 21 YFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILV 100 (396)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 333444455556788776 56777788888999999999999999999887665554433322111100000000001
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 014286 322 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 401 (427)
...+..++.+.+.+.. .+....+..|..+ .++...|......++|..++|.+.|.+.+ .+|+..|.+.+++.++..
T Consensus 101 ~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~ 176 (396)
T TIGR00882 101 GAIVGGLYLGFVFSAG-AGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILM 176 (396)
T ss_pred HHHHHHHHHHHHhccc-hhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHH
Confidence 1111122223323222 3333435555422 34556778888889999999999988765 589999988887777766
Q ss_pred HHHHHhccC
Q 014286 402 AFVKRNVVE 410 (427)
Q Consensus 402 ~~~~~~~~~ 410 (427)
++.+...++
T Consensus 177 ~~~~~~~~~ 185 (396)
T TIGR00882 177 LLLMFAKPK 185 (396)
T ss_pred HHHHHhCCC
Confidence 555444443
No 202
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.08 E-value=7.3e-09 Score=96.03 Aligned_cols=163 Identities=17% Similarity=0.135 Sum_probs=112.5
Q ss_pred chhHHHHhHHHHHHhcCCChhHHHHHHHHH-HHHHHHhHhhhhccc-----Cccc-hhhhhhHHHHHHHHHHHHHhhcCC
Q 014286 242 GINAIFYFSSSVFKSAGLSSGLANVFVGIA-NLLGSVVAMVLMDKL-----GRKA-LLQWSFFSMAVSMAIQVAASSSYI 314 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~g~l~d~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
.......-.|.++++.|++...+.....+. -.+..++.|+++||+ |||+ .+..+..+.+++...+.+...
T Consensus 14 ~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~--- 90 (402)
T PRK11902 14 PLALTSGTLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPP--- 90 (402)
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCc---
Confidence 455566667888888999988443332221 147788999999999 7765 677777777766666554321
Q ss_pred CCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHH
Q 014286 315 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LGPQLLYSIF 393 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~ 393 (427)
....+......++.. .......+...+++.|..|+++|+++.++......+|..+++.+.+.+.+. .||+..|++.
T Consensus 91 --~~~~~~l~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~ 167 (402)
T PRK11902 91 --HAALWPLAGLAVLVA-FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLM 167 (402)
T ss_pred --cchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHH
Confidence 122233333323333 333344566677999999999999999999998899999999999999885 4999999988
Q ss_pred HHHHHHHHHHHHHhccCC
Q 014286 394 GTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~ 411 (427)
+++.++..+.. +..+|+
T Consensus 168 a~~~l~~~l~~-~~~~e~ 184 (402)
T PRK11902 168 AGLMLAGALTT-LWAPEP 184 (402)
T ss_pred HHHHHHHHHHH-HhcCCC
Confidence 88776654433 445544
No 203
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.06 E-value=5.1e-09 Score=95.42 Aligned_cols=145 Identities=13% Similarity=0.096 Sum_probs=102.2
Q ss_pred hHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 244 NAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 244 ~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
.......|.+.+++|.+.. +......++..++.+..|+++||+|||+.+..+.++..++.+.. ... +.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--------~~ 87 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--------GT 87 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--------cH
Confidence 3344567788888898877 56677788889999999999999999999988887766655544 211 11
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--PQLLYSIFGTFCL 398 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~ 398 (427)
+..++..++.+.+.+... +.....+.|.+| ++|+++.++.+....+|..+++.+.+.+.+..+ |+..|...+++.+
T Consensus 88 ~~l~~~~~~~g~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIIN-VLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHHHHHHHHHHh-ccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 233333344444443322 223336677776 689999999999999999999999998887653 7777766655444
Q ss_pred H
Q 014286 399 M 399 (427)
Q Consensus 399 ~ 399 (427)
+
T Consensus 166 ~ 166 (355)
T TIGR00896 166 L 166 (355)
T ss_pred H
Confidence 3
No 204
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.04 E-value=6.6e-09 Score=96.05 Aligned_cols=130 Identities=19% Similarity=0.123 Sum_probs=87.6
Q ss_pred HHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcC
Q 014286 271 ANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIF 350 (427)
Q Consensus 271 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (427)
...++.++.|+++||+|||+.+..+.++..++.++.....+.........+..++...+.+.+.+. ..+....++.|.+
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~-~~~~~~~~~~~~~ 125 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGG-EWGGAALYLAEYA 125 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccc-cccccHHHhhhcC
Confidence 334688999999999999999999998888887777664432100000011122222333333332 2344455899999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHH--------HHhccchhHHHHHHHHHHHH
Q 014286 351 PSRIRAKAMAVCMSVHWVINFFVGLLFLRLL--------EQLGPQLLYSIFGTFCLMAV 401 (427)
Q Consensus 351 p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~--------~~~g~~~~~~~~~~~~~~~~ 401 (427)
|+++|+...++.+....+|..+++.+.+.+. +..+|+..|.+.+++.++..
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988776654 34678888877666555443
No 205
>TIGR00898 2A0119 cation transport protein.
Probab=99.02 E-value=6.7e-09 Score=99.44 Aligned_cols=149 Identities=20% Similarity=0.146 Sum_probs=107.4
Q ss_pred HHHHHHhcCCC---h---hHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHH
Q 014286 250 SSSVFKSAGLS---S---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 323 (427)
Q Consensus 250 ~~~~~~~~g~~---~---~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (427)
.+.+.++.+.+ . ++......++.+++.++.|+++||+|||+.+..+.++..++.++..+..+ .+..
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~--------~~~~ 183 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN--------YTVF 183 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc--------HHHH
Confidence 34455556665 2 26777888899999999999999999999999988888887776665432 1233
Q ss_pred HHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Q 014286 324 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAF 403 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 403 (427)
++..++.+++.+ ...+....++.|.+|+++|+.+.++......+|.++++.+.+.+.+ |+..+.+.++..++..+.
T Consensus 184 ~~~r~l~G~~~~-~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~ 259 (505)
T TIGR00898 184 LVFRLLVGMGIG-GIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLL 259 (505)
T ss_pred HHHHHHHHhhcc-chHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHH
Confidence 333333333332 3356666699999999999999999988888898888887765543 888888887776666555
Q ss_pred HHHhccCC
Q 014286 404 VKRNVVET 411 (427)
Q Consensus 404 ~~~~~~~~ 411 (427)
. ++.+|.
T Consensus 260 ~-~~~~es 266 (505)
T TIGR00898 260 S-WFVPES 266 (505)
T ss_pred H-HhcCCC
Confidence 4 455653
No 206
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=2.2e-08 Score=92.80 Aligned_cols=140 Identities=19% Similarity=0.089 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
++......+.+++.+.+|++.||+|.|+++..+.++.+++.++..+..... .+..++.-++.+.+.+.. .|..
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~------~~~~~~~R~lqGl~~g~~-~pa~ 149 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG------FYLLLVLRFLQGLGQGVL-FPAI 149 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc------chhhHHHHHHhHHHHhHH-Hhhh
Confidence 677888899999999999999999999999999999999998888876543 123344445555555544 4455
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LGPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
..+.++-.|+++|++..++.....++|.+++-++.|.+.+. .||+..|++.+++.++..++.+.+..
T Consensus 150 ~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 150 GSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred hceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 55899999999999999999999999999999999999998 99999999999998887777655554
No 207
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.96 E-value=5.3e-08 Score=89.62 Aligned_cols=145 Identities=15% Similarity=0.087 Sum_probs=93.6
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHH-HHHHHHHHHhhcCCCCCc
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMA-VSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 318 (427)
+.....+.|.+.++.|.+.. .......+...++.++.+.++||++|+........... +..+.+... ..
T Consensus 20 ~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~ 92 (382)
T TIGR00902 20 YGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAG-------AH 92 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh-------hh
Confidence 44555567777788899877 34445567777888999999999998543322221111 111111111 11
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFC 397 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 397 (427)
+.+..++...+.+.+.+. ..|...++..+ ++++|+++.|.......+|.+++|.+.|.+.+..||+..|.+.+.+.
T Consensus 93 ~~~~l~~~~~l~~~~~~~-~~p~~~al~~~--~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~ 168 (382)
T TIGR00902 93 NAWLLFIAIGLFALFFSA-GMPIGDALANT--WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGL 168 (382)
T ss_pred hHHHHHHHHHHHHHHHcc-chhHHHHHHHH--HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 123333333334444433 35566656554 24778999999999999999999999999999999999888776553
No 208
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.96 E-value=1.6e-08 Score=95.02 Aligned_cols=162 Identities=14% Similarity=0.148 Sum_probs=104.2
Q ss_pred HhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcc----cCccc-hhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 248 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDK----LGRKA-LLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~----~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
+..+++.+..|.++. .......+...+..++.|+++|| +|||+ .+..+....+++.+++...+... ....
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~--~~~~ 98 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS--ATGK 98 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC--cchH
Confidence 445556667888887 45555557788889999999998 56644 56666666666666655433211 1111
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-------HhccchhHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-------QLGPQLLYS 391 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-------~~g~~~~~~ 391 (427)
.+.......++..+.+....|... +..|.. ++++|++..++.+....+|..+++.+.+.+.. ..||+..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~ 177 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWS-LVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFAL 177 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhh-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHH
Confidence 223333334444444443334333 667765 56889999999998888888888777776664 346777788
Q ss_pred HHHHHHHHHHHHHHHhccCCC
Q 014286 392 IFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~ 412 (427)
+.+++.++..++..+..+|++
T Consensus 178 i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 178 VLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHcCCEecC
Confidence 888777777666655566543
No 209
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.94 E-value=9e-09 Score=96.64 Aligned_cols=175 Identities=21% Similarity=0.126 Sum_probs=133.1
Q ss_pred hHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHH
Q 014286 226 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVS 302 (427)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 302 (427)
|...++.++......+.......+.+.+.++++.+.. +...+......+..++.+.+.||+|.|.+.+.|.++..++
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 4555555555555555555555666777777776655 5555556666777889999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 303 MAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 382 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 382 (427)
+++..+..+.+ ...+...++.+.++++...|... .+...|+ ++|+.|.|+......+|.++-|.+...+.+
T Consensus 125 ~~lssF~~~i~-------~l~lt~gvi~G~G~~~~~~paiv-iv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 125 LLLSSFATSLW-------QLYLTFGVIGGLGLGLIYLPAVV-ILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred HHHHHHHhhHH-------HHHHHHHHHhhccchhhhcchhh-hhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 99888876532 23344445566666666666666 6666655 789999999999999999999999999999
Q ss_pred HhccchhHHHHHHHHHHHHHHHHHhcc
Q 014286 383 QLGPQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 383 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
..||+..+++.+.+.+-..+......|
T Consensus 196 ~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 196 KYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999988777666666555
No 210
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.94 E-value=4.8e-08 Score=90.22 Aligned_cols=309 Identities=15% Similarity=0.143 Sum_probs=168.5
Q ss_pred HHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHH----HHHHHHHHHhHHhhhcccchhHHHHHhhHH
Q 014286 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC----LGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~----~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 127 (427)
+.....+-.+..++......+..+.....++.+....+ +...... .+...+.++..|.++||+|||..+...++.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~-~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLEN-GLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchh-hhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 44455555555666665666666666666654433322 3444444 577789999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhhcc--ccccceeecccCCchhhhhcCChHHHHHHHHH-----------------
Q 014286 128 MIIGASISATTRNLIGMLLGRFVVGTGMG--LGPTVAALYVTESPHWLYKKGRTAEAEAEFEK----------------- 188 (427)
Q Consensus 128 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------------- 188 (427)
..+..+...+.. +|.++ +.|+..+ .......+++++.- ..+.+......+..
T Consensus 102 ~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis----~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 102 TILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADIS----SEEERSSSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred HHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeecc----chhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 888888777766 33333 5555433 33445555666521 11111111111110
Q ss_pred --------------------HhCCCchhhHHHHHhhh----------hcCCCCCcchhHhhhcccchhHHHHHHHHHHh-
Q 014286 189 --------------------LLGGSHVKSSLAELSKL----------DRGDDGDIVKFEELLYGRHFRVVFIGSTLFAL- 237 (427)
Q Consensus 189 --------------------~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (427)
.+.....++...+.++. ..........++...+.+..+..+.......+
T Consensus 173 ~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~ 252 (463)
T KOG2816|consen 173 KFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLS 252 (463)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHH
Confidence 00000111111111110 00000011122222222222222221111111
Q ss_pred --hhccchh-HHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHh-hhhcccCccchhhhhhHHHHHHHHHHHHHh
Q 014286 238 --QQLSGIN-AIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAM-VLMDKLGRKALLQWSFFSMAVSMAIQVAAS 310 (427)
Q Consensus 238 --~~~~~~~-~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 310 (427)
....... ...+|. ....+.+.. ......+....++..+.. .+...++-|+....|...-.+.....++..
T Consensus 253 ~~~~~~~~~~~~~~yl---~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~ 329 (463)
T KOG2816|consen 253 SLPEAGGASDVLLLYL---KAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT 329 (463)
T ss_pred HHHHhcCceeEEEEEE---eeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc
Confidence 1110000 111111 123455555 344555566666666555 777788888888888888888888888765
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 311 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 383 (427)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 383 (427)
..+ ...... ....+.....|...+..+...+++++|++.++...+..+...++|.+.+.++..
T Consensus 330 ~~w--------~~~~~~--v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 330 ETW--------MMFAAG--VVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred cch--------hhhHHH--HHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 432 222222 222233345666677888888899999999999999999999999999988654
No 211
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.94 E-value=3.9e-08 Score=93.61 Aligned_cols=116 Identities=18% Similarity=0.262 Sum_probs=100.9
Q ss_pred HHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHH
Q 014286 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (427)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 130 (427)
..+.++++..+..++..+.+...+..+.+.|+++.++. |++.+.+-++..+...+..+.+-|.-|-+.+-+|++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~s--G~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQS--GLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcc--eeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 34666777778888888888899999999999987776 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh-------------------h--------------------------------hH-HHHHHHHHHhhhcccc
Q 014286 131 GASISATTR-------------------N--------------------------------LI-GMLLGRFVVGTGMGLG 158 (427)
Q Consensus 131 ~~~~~~~~~-------------------~--------------------------------~~-~l~~~r~l~G~~~g~~ 158 (427)
+++++++-+ + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 999987620 0 12 4678899999999999
Q ss_pred ccceeecccC
Q 014286 159 PTVAALYVTE 168 (427)
Q Consensus 159 ~~~~~~~i~~ 168 (427)
++.+..|+.|
T Consensus 255 ~tlGisYiDD 264 (735)
T KOG3626|consen 255 FTLGISYIDD 264 (735)
T ss_pred ccCCCccccc
Confidence 9999999995
No 212
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.92 E-value=5.2e-08 Score=89.70 Aligned_cols=149 Identities=14% Similarity=0.045 Sum_probs=92.6
Q ss_pred hhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhh-HHHHHHHHHHHHHhhcCCCCCc
Q 014286 243 INAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSF-FSMAVSMAIQVAASSSYIPGSA 318 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
......++|.+.++.|.+.. .......+...++.++.|++.||+||+....-.. +...+....+... ..
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~ 92 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFG-------AH 92 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHh-------cc
Confidence 34444556667778888877 4556666777888999999999999843221111 1111111111111 11
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Q 014286 319 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCL 398 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 398 (427)
+.+...+...+.+.+.+ ...|...++..+. .++|+.+.+.......+|..++|.+++.+.++.||+..|++.++..+
T Consensus 93 ~~~~l~i~~~l~g~~~~-~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFS-PLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred cHHHHHHHHHHHHHHHc-ccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 22333333333333333 3345555455554 35688889999999999999999999999999999999887776544
Q ss_pred HHH
Q 014286 399 MAV 401 (427)
Q Consensus 399 ~~~ 401 (427)
+..
T Consensus 170 ~~~ 172 (382)
T PRK11128 170 SML 172 (382)
T ss_pred HHH
Confidence 443
No 213
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.90 E-value=3.1e-08 Score=95.18 Aligned_cols=136 Identities=18% Similarity=0.117 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
+...++.++..+|.++.|.++||+|||+++..+.++..++.+..++..+. ..+...-++.+.+..+...+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~---------~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNY---------WMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHhhccchhHHh
Confidence 56777888999999999999999999999999999999998887776653 223333333333344555666
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
..+..|.+++++|+.+..+ ....+.++.+++...+++.. +|++.+++..+...+..++ ++..+|.
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 6699999999999999999 88888899999999998887 8888888887777766555 3444453
No 214
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.89 E-value=1.4e-08 Score=91.73 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=112.5
Q ss_pred hhhccchhHHHHhHHHHHH-hcCCChhH---HHHHHHHHHHHHHHhHhhhhcc-cCccchhhhhhHHHHHHHHHHHHHhh
Q 014286 237 LQQLSGINAIFYFSSSVFK-SAGLSSGL---ANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASS 311 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
+.+++....+.+|+.+... .+|++... ....++...-+..+++||++|| +|+|+.+..+.++.+++.++++....
T Consensus 35 FsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~ 114 (498)
T COG3104 35 FSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSV 114 (498)
T ss_pred HhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccc
Confidence 3333334444444433322 23366663 3333333344667889999999 69999999999999999998876530
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCcc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 014286 312 SYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSR--IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLL 389 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 389 (427)
.......+.+.+...+.+. .-+....++.|++|++ +|-.+.++.....++|+.++|.+.+++.++.||+..
T Consensus 115 ------~~~~gl~i~L~~I~iG~Gl-~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~g 187 (498)
T COG3104 115 ------SGPGGLYIGLALIIVGTGL-FKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVG 187 (498)
T ss_pred ------ccccHHHHHHHHHHhcccc-ccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHH
Confidence 1112344444444444432 3355555899988854 367788888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 014286 390 YSIFGTFCLMAVAFVKRNV 408 (427)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~ 408 (427)
|...++-..++.+..+...
T Consensus 188 F~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 188 FGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 9988888887776665443
No 215
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.85 E-value=8.7e-08 Score=91.63 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 262 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
++......++..++.++.|+++|++|||+.+..+.+...++.++.....+. ....++-++.+.+.+......
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~--------~~l~~GR~l~G~g~G~~~~~~ 163 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSW--------YQLIVGRILTGLGVGGASVLA 163 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHhccchhhhhhcc
Confidence 477788889999999999999999999999999999999999998887643 356666666666666555444
Q ss_pred hhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 342 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL--GPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
.. +.+|+.|++.||...+..+....+|..++ .+.+...++. +|+..+.+..+.+++..+. ..+.||+
T Consensus 164 pi-y~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 164 PV-YISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred hh-hHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 44 99999999999999999999988777777 6666666554 7887777777776666666 5666654
No 216
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.82 E-value=4e-07 Score=84.14 Aligned_cols=169 Identities=15% Similarity=0.086 Sum_probs=102.1
Q ss_pred hhhccchhHHHHhHHHHHHhcCCChhHHHH-----HHHHHHHHHHHhH-hhhhcccCccchhhhhhHHH-HHHHHHHHHH
Q 014286 237 LQQLSGINAIFYFSSSVFKSAGLSSGLANV-----FVGIANLLGSVVA-MVLMDKLGRKALLQWSFFSM-AVSMAIQVAA 309 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~-g~l~d~~g~~~~~~~~~~~~-~~~~~~~~~~ 309 (427)
+.+...+.....+.|.++++.|.+...+.. ...+..++..++. ++..||+|||+..++...+. ..+...+...
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~ 90 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALV 90 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcC
Confidence 334445566667788888999998883332 3355555566665 55789999888865544322 2122222211
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 014286 310 SSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLL 389 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 389 (427)
.. ......+ ... .......+.....+....+..|..+++.++...+.......+|..+++...+.+.++.||+..
T Consensus 91 ~~---~~~~~~~-~~~-~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~ 165 (390)
T TIGR02718 91 GP---DVAGAGW-AVG-LLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPA 165 (390)
T ss_pred Cc---chhhHHH-HHH-HHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 10 0111111 122 222222223333445555666777777777777777777788889999888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccC
Q 014286 390 YSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~ 410 (427)
|++.+++.++..+..++..++
T Consensus 166 f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 166 FLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCC
Confidence 999988877766655444433
No 217
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.81 E-value=2.3e-07 Score=85.42 Aligned_cols=142 Identities=23% Similarity=0.184 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
.....+.+++++|++..++++||+|||..+.++.++..++.++........ .....++.-++.+...+.......
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~-----~~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAP-----SFEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHhHHHHHHHH
Confidence 355667789999999999999999999999998888888877776655322 223455555555655555544444
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHH-HH-HHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR-LL-EQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~-l~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
. ++.|+.|++.||....+......+|..++..++.. +. +...|...+....+.+++.. +...+.||.
T Consensus 139 m-yl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PES 207 (485)
T KOG0569|consen 139 M-YLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPES 207 (485)
T ss_pred H-HHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCC
Confidence 4 99999999999999999888888888888655433 22 12235555544444444443 334556664
No 218
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.80 E-value=1.6e-07 Score=79.12 Aligned_cols=163 Identities=14% Similarity=0.142 Sum_probs=104.5
Q ss_pred ccchhHHHHhHHHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCC
Q 014286 240 LSGINAIFYFSSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPG 316 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
.+.......|.+.+.+..|++... +.....++..+ .+..|.+.|++|++.++.++.+...++...+.........
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~- 92 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP- 92 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC-
Confidence 334566678899999999999884 33444555555 4788999999999999999999999999888776543321
Q ss_pred CchhHHHHHHHHHHHHHHhhcc-cchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Q 014286 317 SASLYLSVGGMLMFVLTFALGA-GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGT 395 (427)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 395 (427)
..+.|.. ++..+..+.+.++ .........+.+| ++||++.|+.-....+++.+-..+...+.+. +....+.+.+.
T Consensus 93 ~~~~~~~--~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~ 168 (250)
T PF06813_consen 93 SLPVWLM--CLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAV 168 (250)
T ss_pred ccchHHH--HHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHH
Confidence 1222222 2322333333222 2222223446788 6799999999999999988888887776654 33334444444
Q ss_pred HHHHHHHHHHHhc
Q 014286 396 FCLMAVAFVKRNV 408 (427)
Q Consensus 396 ~~~~~~~~~~~~~ 408 (427)
...+..++...+.
T Consensus 169 ~~~~v~l~~~~~v 181 (250)
T PF06813_consen 169 LPAVVCLVAMFFV 181 (250)
T ss_pred HHHHHHHHHhhhe
Confidence 4443333333333
No 219
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.78 E-value=4.5e-08 Score=90.92 Aligned_cols=305 Identities=16% Similarity=0.163 Sum_probs=153.3
Q ss_pred chhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc---c--hhHHHHHhhHHHHHHHHHHHhh----hhhH
Q 014286 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV---G--RRRAFQLCALPMIIGASISATT----RNLI 142 (427)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~---G--rr~~l~~~~~~~~~~~~~~~~~----~~~~ 142 (427)
+..|.+++++|++.++. ..+.+...+...+ -+++|.++|-+ | ||+-++++.++..++.+..+.. .+..
T Consensus 11 ~~~~~l~~~l~ls~~~~--~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQL--QRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 45678899999977766 5667766666554 58899999986 3 4444566777776666656553 3566
Q ss_pred HHHHHHHHHhhhccccccceeecccCCchhhhhcCChH--H---H-------HHHHHHHhCCCc-----------hh---
Q 014286 143 GMLLGRFVVGTGMGLGPTVAALYVTESPHWLYKKGRTA--E---A-------EAEFEKLLGGSH-----------VK--- 196 (427)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~~~~--~---~-------~~~~~~~~~~~~-----------~~--- 196 (427)
...++-++..+|....-..+.+++.|..+ ++... . . ...+........ ..
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~----~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~ 163 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELAR----REPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAAL 163 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhh----cCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHH
Confidence 66677788888888888888877776321 11111 0 0 001111111000 00
Q ss_pred ------h---HHHHHhhhh--c----CCC--C--------CcchhHhhhcccchhHHHH-HHHHHHhhhccchhHHHHhH
Q 014286 197 ------S---SLAELSKLD--R----GDD--G--------DIVKFEELLYGRHFRVVFI-GSTLFALQQLSGINAIFYFS 250 (427)
Q Consensus 197 ------~---~~~~~~~~~--~----~~~--~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 250 (427)
. ..++.++.+ + .++ + .....++.++.+..+...+ ..++.............++.
T Consensus 164 ~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~ 243 (433)
T PF03092_consen 164 PLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQ 243 (433)
T ss_pred HHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEE
Confidence 0 000000000 0 000 0 0011222333333333222 11111111111001011111
Q ss_pred HHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhc---CCCCCchhHHHH
Q 014286 251 SSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS---YIPGSASLYLSV 324 (427)
Q Consensus 251 ~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 324 (427)
.+..+..++++.. ...+..++.++|..+..+...+..-|+++....++..+..+.-...... ...-.+. +..+
T Consensus 244 ~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~-~f~l 322 (433)
T PF03092_consen 244 TDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ-WFAL 322 (433)
T ss_pred eccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe-EEEE
Confidence 1111112255553 3344445555565555555555555666555554443332221111000 0000111 2222
Q ss_pred HHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 014286 325 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 385 (427)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 385 (427)
.--.+......+.+.|... ..+|++|+..-|+..++..++.++|..++..+...+.+..|
T Consensus 323 gd~~l~~~~~~i~~mP~lv-l~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 323 GDTILEEVIGMIAFMPSLV-LAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred EhHHHHHHHHHHHHHHHHH-HHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2233334444445556666 88999999999999999999999999999999999888776
No 220
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.78 E-value=1.7e-08 Score=68.32 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=73.2
Q ss_pred hccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhH
Q 014286 63 FGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI 142 (427)
Q Consensus 63 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 142 (427)
.++.+..+.|.+|.+++|.++|.++. |++.+...+||.+|.+...++.++..+++.+..+++...+..+.+++.++++
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~a--g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQA--GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 35566778999999999999987777 9999999999999999999999999999999999999999999999998877
Q ss_pred HHH
Q 014286 143 GML 145 (427)
Q Consensus 143 ~l~ 145 (427)
...
T Consensus 82 ~w~ 84 (85)
T PF06779_consen 82 LWS 84 (85)
T ss_pred HHh
Confidence 653
No 221
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.74 E-value=6.5e-07 Score=78.78 Aligned_cols=155 Identities=16% Similarity=0.067 Sum_probs=109.0
Q ss_pred HHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhH
Q 014286 245 AIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLY 321 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (427)
......|.+.+.++.+.. +....+..+..++++..+++.+|+|+|+-+..+..+++++..++.-..... ...
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~-----~y~ 105 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK-----SYG 105 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh-----hHH
Confidence 334456677677776655 667777788889999999999999999999999999999998876444321 112
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Q 014286 322 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ------------------ 383 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~------------------ 383 (427)
..+..+++.+.+.+.- -.....++....|++....-+.+.+.+..+|++++|.+++.+..+
T Consensus 106 ~FL~~lFila~Gi~~L-etaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~ 184 (422)
T COG0738 106 FFLVALFILASGIGLL-ETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGAD 184 (422)
T ss_pred HHHHHHHHHHhhhHHH-HhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHH
Confidence 2233333333333322 223333777888887778889999999999999999999998872
Q ss_pred -hccchhHHHHHHHHHHHHHHHH
Q 014286 384 -LGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 384 -~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
..++.+|...+...++..+...
T Consensus 185 ~~~v~~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 185 ASSVQFPYLILAGLLVLLAVLIL 207 (422)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHH
Confidence 1266777777776666555443
No 222
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.71 E-value=3e-06 Score=77.47 Aligned_cols=75 Identities=15% Similarity=0.004 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccCC
Q 014286 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTES 169 (427)
Q Consensus 94 ~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 169 (427)
.++-...+.++.++.+.+.|+.|.|+.++++...+....+.+-+ +|-+.++++-.+.|+|.+..+..-..|+.|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 66677788899999999999999999999999999888777766 4567788899999999999998888888863
No 223
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.9e-07 Score=86.96 Aligned_cols=141 Identities=16% Similarity=0.093 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
....++.++.+++.+.++.+.||++..+.+....++..+..++.....+. +..++.-++.+...+.+ .|..
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~--------~~~ialr~llGl~es~~-wP~~ 155 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSF--------PGLIALRFLLGLFESGG-WPGV 155 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHhccc-chHH
Confidence 67788889999999999999999995555544444443333333322221 23444455555555554 4555
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH------HhccchhHHHHHHHHHHHHHHHHHhccCCC
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE------QLGPQLLYSIFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
..++...+.+++||.-+|+.++...+|+++|+.++..+.. ..||++.|++-+++.+...++.++++|+..
T Consensus 156 ~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P 231 (495)
T KOG2533|consen 156 VAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP 231 (495)
T ss_pred HHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCCh
Confidence 5599999999999999999999999999999999888643 467999999999999999988888887643
No 224
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.67 E-value=2.1e-08 Score=82.53 Aligned_cols=325 Identities=17% Similarity=0.224 Sum_probs=167.5
Q ss_pred ccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHH
Q 014286 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (427)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 149 (427)
-+|.+-.+-+.++....+. |.+.-..+-...+...+.|.++|+-|||+.-+.-++.+.++++ .-.++.|..++++|.
T Consensus 56 QgPYvYyLYstYgFgkG~I--gqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~ 132 (454)
T KOG4332|consen 56 QGPYVYYLYSTYGFGKGDI--GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRV 132 (454)
T ss_pred cCceeeeeehhcCccCCcc--ceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhh
Confidence 3566666667778766666 7766666666778888999999999999977666666655443 445788999999999
Q ss_pred HHhhhccccccceee-cccCCc-------hhhhhcCCh-----HHHHHHHHHHhC--------CCchh---h--H-----
Q 014286 150 VVGTGMGLGPTVAAL-YVTESP-------HWLYKKGRT-----AEAEAEFEKLLG--------GSHVK---S--S----- 198 (427)
Q Consensus 150 l~G~~~g~~~~~~~~-~i~~~~-------~~~~~~~~~-----~~~~~~~~~~~~--------~~~~~---~--~----- 198 (427)
+-|+..+..+..--+ ++.|.- .|+...-.. .....++..+.+ ...+. . .
T Consensus 133 LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaig 212 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIG 212 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHH
Confidence 999998877765443 333321 121110000 000111111111 00000 0 0
Q ss_pred HHHHhhhhcCCCCCcchhHh-----------hhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHH-HhcCCChhHHHH
Q 014286 199 LAELSKLDRGDDGDIVKFEE-----------LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSGLANV 266 (427)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 266 (427)
...+...-.++-.++..-++ +..++ +..++ ..+........+.....|.|.+- ++.+.+.+.++.
T Consensus 213 mAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~--ki~LL-G~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFa 289 (454)
T KOG4332|consen 213 MAVILSSWSENYGDPSENKDLLTQFKGAARAIASDE--KIALL-GAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFA 289 (454)
T ss_pred HHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcch--HHHHH-HHHHHHHhhhhheeeeeecccCCCCcccCCchhHHH
Confidence 00000000000011111111 22222 12222 22223333333444444555432 234555557777
Q ss_pred HHHHHHHHHHHhHhhhhcccCc--cchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhh
Q 014286 267 FVGIANLLGSVVAMVLMDKLGR--KALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSL 344 (427)
Q Consensus 267 ~~~~~~~~~~~~~g~l~d~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (427)
-+.+..++|+-+..++..|-.. ...+.+.+.+.++.+.+...... ..+....+...+++++++-...+..+.++..
T Consensus 290 tFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~-vsP~kes~~~s~i~F~~~E~cvGlfwPSimk- 367 (454)
T KOG4332|consen 290 TFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSS-VSPSKESPSESLIGFCLFEACVGLFWPSIMK- 367 (454)
T ss_pred HHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhc-cCCCcCCchHHHHHHHHHHHHHhhcchHHHH-
Confidence 7788888888887777665433 34555555555555444333332 2233444555566666666666665555555
Q ss_pred hccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH--HhccchhHHHHHHHHHHHHHHH
Q 014286 345 LLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE--QLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 345 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~--~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
+-.+..|.+.|++.+-.+..--++-..++-.. .-.+ ..+-+..|-++.+...++.+..
T Consensus 368 mRsqyIPEearstimNfFRvPLnifvClvLyn--lh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 368 MRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHhhCCHHHHhhhhhheechhhHhhhhhhee--cccccCccccchhhhhhHHHHHHHHHHH
Confidence 78888899888776555443333222211110 0011 1234566777776666654443
No 225
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.64 E-value=2.4e-07 Score=86.63 Aligned_cols=162 Identities=18% Similarity=0.199 Sum_probs=105.3
Q ss_pred HhHHHHHHhcCCChhHHHHHHH---HHHHHHHHhHhhhhc----ccCccch-hhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 248 YFSSSVFKSAGLSSGLANVFVG---IANLLGSVVAMVLMD----KLGRKAL-LQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~g~l~d----~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
+..+++.+..|.++.....+.. +...+..++.|.++| |+|||+. +..+....++++.++.............
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4455666777999885555544 445556668999999 7886655 5567777777777666441111111112
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cchhHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP-SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-------PQLLYS 391 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-------~~~~~~ 391 (427)
.....+...++..++.....|... +..|..+ +++|.+..+.-.....+|..+...+.+.+.+..| |.....
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~a-l~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~ 181 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNA-LIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMAL 181 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhh-cCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHH
Confidence 223344445555555555455544 8888877 4689999999989888888877777777765443 566666
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 014286 392 IFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~ 410 (427)
+.+++.++..++..+..+|
T Consensus 182 v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 182 VLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHhhhhhheeee
Confidence 6777777776676666676
No 226
>PRK09669 putative symporter YagG; Provisional
Probab=98.62 E-value=1e-06 Score=82.85 Aligned_cols=161 Identities=14% Similarity=0.177 Sum_probs=96.2
Q ss_pred HhHHHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcc----cCccc-hhhhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 248 YFSSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDK----LGRKA-LLQWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~----~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
+...++.+..|.++.. ...+..+...+..++.|+++|| +|||+ .+..+.+..+++..++...+.. .....
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~--~~~~~ 108 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDF--GATGK 108 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCC--CcchH
Confidence 3344555678998874 4444455666788899999998 66644 4555666666665544433321 11222
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccchhHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-------GPQLLYS 391 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-------g~~~~~~ 391 (427)
.+...+...++..++.....|.. ++..|.. ++++|++..+.......+|+.+++.+...+.... ||...+.
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~-al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~ 187 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYC-AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMM 187 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHH-HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 23333333444444544334443 4777765 4577999889888888888888887666555433 4555566
Q ss_pred HHHHHHHHHHHHHHHhccCC
Q 014286 392 IFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~ 411 (427)
+.+++.++..++.++..+|+
T Consensus 188 i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 188 VMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHhCCeEEe
Confidence 66666655555554444443
No 227
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.61 E-value=1.2e-06 Score=82.92 Aligned_cols=160 Identities=18% Similarity=0.232 Sum_probs=91.4
Q ss_pred hHHHHHHhcCCChhHH---HHHHHHHHHHHHHhHhhhhc----ccCc-cchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 249 FSSSVFKSAGLSSGLA---NVFVGIANLLGSVVAMVLMD----KLGR-KALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 249 ~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~g~l~d----~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
...++.+..|.++... ..+.-+...+..++.|+++| |+|| |+.+..+....++++.++...+.. ......
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~--~~~~~~ 106 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLF--EGTAQY 106 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCC--CccHHH
Confidence 3444555679988744 44445566677888999999 5587 455556666666665555332211 111112
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccchhHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-------GPQLLYSI 392 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-------g~~~~~~~ 392 (427)
+...+...++..++.....|... +..|+. ++++|.+..+.-....++|+.+.+.+...+.+.. |+.....+
T Consensus 107 ~~~~~~~~l~~~~~t~~~ip~~a-l~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i 185 (473)
T PRK10429 107 VFVCVTYILWGMTYTIMDIPFWS-LVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLV 185 (473)
T ss_pred HHHHHHHHHHHHHHHHHcchHHh-hhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 22333333444455444444444 777876 5788999888877777777777766655544333 23444444
Q ss_pred HHHHHHHHHHHHHHhccCC
Q 014286 393 FGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~ 411 (427)
.+++.++..++.++..+|+
T Consensus 186 ~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 186 LIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHcCceec
Confidence 5555454444554445554
No 228
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.60 E-value=1.9e-06 Score=79.79 Aligned_cols=136 Identities=17% Similarity=0.164 Sum_probs=105.3
Q ss_pred HHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhcc
Q 014286 268 VGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLP 347 (427)
Q Consensus 268 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (427)
.++..++.++..|.++|++|||..+....+...+....+.+.. |+.++ ..-..+++. .......++++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~----------~~~~~-~~~l~g~~~-~~~s~~~a~va 138 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG----------YWFFL-LLGLSGGFS-AIFSVGFAYVA 138 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH----------HHHhh-hcccccchh-hhhhhhhhhee
Confidence 3667778889999999999999999888877777766665543 12222 111222222 22344455899
Q ss_pred CcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCCCCCC
Q 014286 348 EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 415 (427)
Q Consensus 348 ~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (427)
|....+.|....|+.+.....+..++|.+.+.+....|+..++.+.++..++..+......||+..++
T Consensus 139 dis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 139 DISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred eccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 99999999999999999999999999999999999999999999999999888888888888875444
No 229
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.50 E-value=2.5e-06 Score=80.48 Aligned_cols=154 Identities=17% Similarity=0.126 Sum_probs=90.6
Q ss_pred hHHHHHHhcCCChhHHHHHHHHHHHH--HHHhHhhhhcccC-----ccchhhhhhHHHH-HHHHHHHHHhhcCCCCCchh
Q 014286 249 FSSSVFKSAGLSSGLANVFVGIANLL--GSVVAMVLMDKLG-----RKALLQWSFFSMA-VSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 249 ~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~g~l~d~~g-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 320 (427)
..+.+.++.|.+........++..++ ..++.|.++||++ ||+.+.++.++.. ++...+.. .+...
T Consensus 48 ~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~-------~~~~~ 120 (468)
T TIGR00788 48 LSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPG-------KVSSA 120 (468)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccc-------ccchH
Confidence 34455556799988554444443332 2456999999996 6666666655542 22221111 11111
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhh---HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAK---AMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFC 397 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~---~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 397 (427)
........+..++.+ ........+..|..+ +.+.. ..+......++|..+++.+.|.+.+..+|+..|.+.+++.
T Consensus 121 ~~~~~~~~l~~~~~a-~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ 198 (468)
T TIGR00788 121 KVAAAFIFLAALAKA-LYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALL 198 (468)
T ss_pred HHHHHHHHHHHHHHH-HHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHH
Confidence 122222222332222 223455668888877 44444 3344444456899999999999999999999998888887
Q ss_pred HHHHHHHHHhccCCC
Q 014286 398 LMAVAFVKRNVVETK 412 (427)
Q Consensus 398 ~~~~~~~~~~~~~~~ 412 (427)
++.. +...+.+|.+
T Consensus 199 ll~~-~~~~~~~E~~ 212 (468)
T TIGR00788 199 LLQL-FVSNLSKERR 212 (468)
T ss_pred HHHH-HHHHhccccc
Confidence 7763 3345566643
No 230
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.45 E-value=2.1e-07 Score=83.88 Aligned_cols=174 Identities=15% Similarity=0.106 Sum_probs=88.9
Q ss_pred cccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhH
Q 014286 221 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 297 (427)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 297 (427)
|+++++......+.+++. .....+++...+.+..|++.. .+.....+..++.+++.|.++||.|.||-++....
T Consensus 5 ~~~~~~~~s~~~f~~Ff~---~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~ 81 (412)
T PF01306_consen 5 KNKNYWWLSLFYFFYFFI---WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIA 81 (412)
T ss_dssp HSHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHH---HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHH
Confidence 344555544444444432 223344444444455788877 45555666777888999999999996665443322
Q ss_pred HHHH--H-HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhccc---chhhhhccCcCCccchhhHHHHHHHHHHHHHH
Q 014286 298 SMAV--S-MAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAG---PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINF 371 (427)
Q Consensus 298 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 371 (427)
...+ + +....+.+... .+ .....++.+...+..+. |+.-+++.+. . +..+--.|=....+++|.+
T Consensus 82 ~l~~l~~pff~~v~~pll~----~n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~-s-r~~~feYG~~R~wGSig~a 152 (412)
T PF01306_consen 82 ILLLLFGPFFIYVFGPLLQ----SN---FWLGAIIGGIYLGLVFNAGVPLSEAYAERV-S-RRNGFEYGRARMWGSIGFA 152 (412)
T ss_dssp HHHHTCHHHHHHTHHHHHH----TT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-H-HHHSS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HH---HHHHHHHHHHHHHHHHcccchHHHHHHHHH-H-HHhcCCcchHHHHhhHHHH
Confidence 2211 1 11111111110 00 11112222222232222 3333233222 2 3456667788889999999
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHh
Q 014286 372 FVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 372 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
++..++|.+.+ .+....|++..+..++..++....
T Consensus 153 i~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~ 187 (412)
T PF01306_consen 153 IASLLAGILFN-INPNIIFWIASAAAIILLLLLLLL 187 (412)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998 455567776655544444444333
No 231
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.45 E-value=3.9e-05 Score=69.11 Aligned_cols=105 Identities=13% Similarity=0.045 Sum_probs=79.7
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhc-cCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 131 (427)
...+|+-.|+..+.-+ -....|.+.+. .|++.++.. .-+.-...-.+....++...+.|..|.|++++++.+...+.
T Consensus 7 ~~llc~~gf~~~frPs-EPfl~~yL~~~~kn~T~~qv~-~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t 84 (412)
T PF01770_consen 7 TLLLCLFGFFKEFRPS-EPFLTPYLTGPDKNFTEEQVN-NEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIIT 84 (412)
T ss_pred HHHHHHHHHHHhcCCC-CccchHHHcCCccCCCHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 4455555555444321 12234455554 688766664 55666777788889999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhhccccc
Q 014286 132 ASISATTRNLIGMLLGRFVVGTGMGLGP 159 (427)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 159 (427)
.++..+.++...+-+.-++.|++.+...
T Consensus 85 ~~lll~~~sv~~mq~~q~~yg~~~a~ev 112 (412)
T PF01770_consen 85 WLLLLFGTSVLAMQLMQFFYGLATAAEV 112 (412)
T ss_pred HHHHHHHCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887643
No 232
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.44 E-value=1.2e-05 Score=69.87 Aligned_cols=168 Identities=18% Similarity=0.152 Sum_probs=123.5
Q ss_pred HHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHH
Q 014286 228 VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 304 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 304 (427)
.+....+..+.-=...+...-.++.+.+++|.+.. +...+..++..+.+++..++.+|+|.++.+..+.++.+++..
T Consensus 13 li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~ 92 (395)
T COG2807 13 LLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL 92 (395)
T ss_pred HHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33344444444334455556667788889999877 566677777778889999999999999999888888877766
Q ss_pred HHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014286 305 IQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL 384 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 384 (427)
+=.... .+..+....+.+.+.+.+..-++. .+.+.+| ++-+..+|++.+...+++++++.+.-.+.++.
T Consensus 93 iR~~~~---------~~~L~~gt~l~G~gIav~nVLLPs-lIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~ 161 (395)
T COG2807 93 IRSLGG---------LPLLFLGTLLAGAGIAVINVLLPS-LIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS 161 (395)
T ss_pred HHhccc---------HHHHHHHHHHHHhhHHHHHHhhhH-HHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh
Confidence 543321 234555555666666555444444 8888898 56899999999999999999999999999888
Q ss_pred -ccchhHHHHHHHHHHHHHHHHH
Q 014286 385 -GPQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 385 -g~~~~~~~~~~~~~~~~~~~~~ 406 (427)
||+....+.+..++++.++.+.
T Consensus 162 ~gW~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 162 GGWRGALGFWALLALLALLIWLP 184 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 6999888888888777665543
No 233
>PRK11462 putative transporter; Provisional
Probab=98.43 E-value=1.1e-05 Score=76.02 Aligned_cols=159 Identities=11% Similarity=0.119 Sum_probs=96.9
Q ss_pred HHHHHHhcCCChhHHHHHH---HHHHHHHHHhHhhhhcc----cCccch-hhhhhHHHHHHHHHHHHHhhcCCCCCchhH
Q 014286 250 SSSVFKSAGLSSGLANVFV---GIANLLGSVVAMVLMDK----LGRKAL-LQWSFFSMAVSMAIQVAASSSYIPGSASLY 321 (427)
Q Consensus 250 ~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~g~l~d~----~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (427)
..++.+..|+++.....+. -+...+.-++.|+++|| +|||+. +.++.+..+++..++...+.. .......
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~--s~~~~~~ 110 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDL--SMNGKMI 110 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCC--CcchHHH
Confidence 3444566799888544444 45556778899999996 576554 455666777766555443321 1112122
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhccCcCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cchhHHHH
Q 014286 322 LSVGGMLMFVLTFALGAGPVPSLLLPEIFP-SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-------PQLLYSIF 393 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-------~~~~~~~~ 393 (427)
...+...++..++.....|... +..|..+ +++|++..+.-.....+|..+++.+...+.+..| |.....++
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~a-l~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCA-LGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHH-HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 3333444445555544445444 6666655 6889999999999999998888888776666543 44444555
Q ss_pred HHHHHHHHHHHHHhccCC
Q 014286 394 GTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~ 411 (427)
+++.+++..+.+...+|+
T Consensus 190 ~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHHHHhcceec
Confidence 555555554554444554
No 234
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.43 E-value=1.6e-05 Score=77.22 Aligned_cols=159 Identities=13% Similarity=0.148 Sum_probs=101.6
Q ss_pred HHhHHHHHHhcCCChhHHHHH---HHHHHHHHHHhHhhhhcc-cCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 247 FYFSSSVFKSAGLSSGLANVF---VGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
..+..++.+..+.+......+ +....-+..+++|+++|+ +|+++.+.++.++..++..++.+..............
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 334445555677776633333 333344566788999997 6999999999999888887776533211111111122
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcCCcc---chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccchhHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSR---IRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-------GPQLLYSI 392 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-------g~~~~~~~ 392 (427)
.++++.+..++.+ +.-|...+...|.++++ .+-+...++....++|+.+++.+.+++.+.. +|...|.+
T Consensus 88 ~l~gLaLia~G~G-giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i 166 (654)
T TIGR00926 88 DLLGLALIALGTG-GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGV 166 (654)
T ss_pred HHHHHHHHHhhcc-ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Confidence 3333444333333 23355555777777643 3677888888999999999999999887553 57778888
Q ss_pred HHHHHHHHHHHHHH
Q 014286 393 FGTFCLMAVAFVKR 406 (427)
Q Consensus 393 ~~~~~~~~~~~~~~ 406 (427)
.+++.+++.++...
T Consensus 167 ~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 167 PAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777777665543
No 235
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.39 E-value=1.8e-07 Score=72.52 Aligned_cols=75 Identities=21% Similarity=0.399 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccC
Q 014286 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 94 ~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.++++.+.+.+++.|++.+...+....++.|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 345678888999999999999999999999999999999999999999999999999999998877776666665
No 236
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.32 E-value=4.6e-05 Score=66.78 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=92.9
Q ss_pred HHHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHH
Q 014286 250 SSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 326 (427)
Q Consensus 250 ~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
.-.+++++|++... .+........+...+.|.++||+|||+..+..+++..++.+.--. ...+.+++.
T Consensus 57 ~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~---------~~~~~L~~G 127 (354)
T PF05631_consen 57 LYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS---------SNYPVLLLG 127 (354)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc---------cccHHHHHH
Confidence 33455678998773 444444556677778899999999999888877777776653321 112344444
Q ss_pred HHHHHHHHhhcccch-hhhhccCc----CCccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHH
Q 014286 327 MLMFVLTFALGAGPV-PSLLLPEI----FPSRIRAKAMAVCMSVH-WVINFFVGLLFLRLLEQLG--PQLLYSIFGTFCL 398 (427)
Q Consensus 327 ~~~~~~~~~~~~~~~-~~~~~~~~----~p~~~~g~~~g~~~~~~-~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~ 398 (427)
-++.+..-+.....- .| ++.|. +|++..+...+...... .+-.+++..++..+.+..| ...+|.....+.+
T Consensus 128 RvlgGiaTSLLfS~FEsW-~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~ 206 (354)
T PF05631_consen 128 RVLGGIATSLLFSAFESW-MVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLA 206 (354)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHH
Confidence 444444433332211 12 44443 45555555555554333 3445555566666677665 4778888888888
Q ss_pred HHHHHHHHhccCCCCC
Q 014286 399 MAVAFVKRNVVETKGK 414 (427)
Q Consensus 399 ~~~~~~~~~~~~~~~~ 414 (427)
++.++.....+|..+.
T Consensus 207 ~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 207 VAAVLILKTWPENYGD 222 (354)
T ss_pred HHHHHHHhcccccCCC
Confidence 7777776666776543
No 237
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.32 E-value=1.8e-05 Score=73.64 Aligned_cols=150 Identities=13% Similarity=0.060 Sum_probs=81.8
Q ss_pred HHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCc-cchhhhhhHHHHHHHHHHHHHhhcCCCCCchh
Q 014286 245 AIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGR-KALLQWSFFSMAVSMAIQVAASSSYIPGSASL 320 (427)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (427)
..++..+++.++.|.+.. +......++.+++++..|+++||+|+ |+.+..+.++..++..+..+..+ .
T Consensus 21 ~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~--------~ 92 (418)
T TIGR00889 21 WLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTT--------P 92 (418)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC--------H
Confidence 445555666677788876 56777888999999999999999965 66777666666555544443221 1
Q ss_pred HHHHHHHHHHHHHHhhcccchhh----hhcc----CcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Q 014286 321 YLSVGGMLMFVLTFALGAGPVPS----LLLP----EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSI 392 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~----~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 392 (427)
+.......+.+..... ..+... .+.. |......|.+..| .+|.+++|.+.|.+ +..+...+|++
T Consensus 93 ~~~~~~~~l~~~~~~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l-~~~~~~~~f~~ 164 (418)
T TIGR00889 93 AGMFPVLLANSLAYMP-TIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL-DIELSNIQLYI 164 (418)
T ss_pred HHHHHHHHHHHHHHcc-HHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh-cccchhHHHHH
Confidence 1222222222222211 111111 1222 2222223444444 46888888888877 32222334666
Q ss_pred HHHHHHHHHHHHHHhccCC
Q 014286 393 FGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~ 411 (427)
.+++.++..++ .+..+|.
T Consensus 165 ~~~~~~~~~~~-~~~~~e~ 182 (418)
T TIGR00889 165 TAGSSALLGVF-ALTLPDI 182 (418)
T ss_pred HHHHHHHHHHH-HhcCCCC
Confidence 66655554443 3455554
No 238
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.31 E-value=6.4e-09 Score=98.11 Aligned_cols=142 Identities=17% Similarity=0.150 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
.......++..+|+++.|+++||+|||+.+..+..+..++.++..+.... .+.+...+.-++.+.+.+.. .+..
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~R~~~G~~~g~~-~~~~ 123 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY-----NNFWMLLIGRFLIGFGIGGA-YVVS 123 (451)
T ss_pred HHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccc-cccc
Confidence 46667778889999999999999999999999999999888887776511 11233444444455544433 3444
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ---LGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
..++.|..|+++|+...++.+....+|..++..+.-...+. .+|+..+.+.++..++..+.. .+.||.
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pES 194 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccc
Confidence 55999999999999999999998888877777665433222 347877766666655443333 455653
No 239
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.30 E-value=1.1e-05 Score=74.04 Aligned_cols=184 Identities=11% Similarity=0.036 Sum_probs=116.5
Q ss_pred cchhHHHHHHHHHHhhhccchhHHHHhHHHHHH-hcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCc-cchhhhhhH
Q 014286 223 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGR-KALLQWSFF 297 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~ 297 (427)
.+++...+.....+..........+.--|+..+ +.+.+.. ++.....++.++++++.|+...|.+. |+.++.+.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 344444444444443333222222222344433 1333333 56667888999999999999999886 888999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014286 298 SMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF 377 (427)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 377 (427)
+++++.++........ +...++.+++-++. +.+.+.....-.|+++..-.++|.++++..+...-+|.++||.+.
T Consensus 111 i~~~g~llY~~l~~~~---~~~~y~mL~~R~l~--Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVP---NGVKYLMLVARILT--GVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred HHHHHHHHHHHHHhcc---cchHHHHHHHHHHc--CcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHH
Confidence 9999988885444322 22334444443333 344455566777888877778899999998887778888887765
Q ss_pred HHHHHH-------------hccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 378 LRLLEQ-------------LGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 378 g~l~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
..+... .-|..+-++.+++.++..++...+.+|.
T Consensus 186 ~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 186 LAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred HHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 433221 1156677788888888877777777664
No 240
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.28 E-value=1.3e-06 Score=58.94 Aligned_cols=67 Identities=25% Similarity=0.389 Sum_probs=54.6
Q ss_pred hhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
+++.....+...|.+|...++.|++..+. |.+.++..+...++.+++|.++||+|+++..+....++
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~i--Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSPSQI--GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 44444555667788888889989866666 99999999999999999999999999998877665543
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.24 E-value=0.0011 Score=60.92 Aligned_cols=125 Identities=23% Similarity=0.289 Sum_probs=75.5
Q ss_pred HHHHHhcCCChhHHHHH---HHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCC--CchhHHHHH
Q 014286 251 SSVFKSAGLSSGLANVF---VGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPG--SASLYLSVG 325 (427)
Q Consensus 251 ~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 325 (427)
..+....|+++..+... ..+.++.+.++..++.+|+|..+.-.++......++.+..........+ .......+.
T Consensus 282 t~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~ 361 (432)
T PF06963_consen 282 TAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLG 361 (432)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHH
Confidence 34445569988854444 4456678889999999999988877777766655554444332221111 112222222
Q ss_pred HHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014286 326 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 376 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 376 (427)
++.+--.+. .++-....-+++|..|+++||+..|+-+..+++...+.-.+
T Consensus 362 gi~~SR~GL-W~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 362 GIALSRIGL-WSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHH-HhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 222222221 12222333388999999999999999999998866555433
No 242
>PRK09848 glucuronide transporter; Provisional
Probab=98.23 E-value=9.6e-05 Score=69.70 Aligned_cols=119 Identities=14% Similarity=0.113 Sum_probs=62.0
Q ss_pred HhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhccc----Cccchh-hhhhHHHHHHHHHHHHHhhcCCCCCch
Q 014286 248 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKL----GRKALL-QWSFFSMAVSMAIQVAASSSYIPGSAS 319 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~----g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (427)
+...++.+..|+++. ....+..+...+..++.|+++||. |||+.. ..+.+...+...++...+. .......
T Consensus 30 ~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 108 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPT-DWSHSSK 108 (448)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcC-CCCcchH
Confidence 344455566788876 455566677788899999999996 666544 4454444443333322221 1111112
Q ss_pred hHHHHHHHHHHHHHHhhcccchhhhhccCcC-CccchhhHHHHHHHHHHH
Q 014286 320 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWV 368 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~ 368 (427)
.+.......+...+++....|... +..+.. ++++|....+.-.....+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~a-l~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 109 VVYAYLTYMGLGLCYSLVNIPYGS-LATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcccHhh-hhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 222233334444445444444433 444443 346677766655443333
No 243
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.22 E-value=5.2e-06 Score=74.30 Aligned_cols=114 Identities=18% Similarity=0.222 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhc-ccch
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALG-AGPV 341 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 341 (427)
.+.....++.++|++..|++.||+|||+++....+++.++.++.+...... ...-....++..=+..+++++ -.|+
T Consensus 88 ~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~---~~~~~m~~L~~~R~~LGiGIGGDYPl 164 (538)
T KOG0252|consen 88 LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTT---SPLGVMMTLCFFRFLLGIGIGGDYPL 164 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCC---CCcchhhHHHHHHHHhhccccCCCcc
Confidence 567777889999999999999999999999999999988887554433211 111112222223333334433 3799
Q ss_pred hhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014286 342 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR 379 (427)
Q Consensus 342 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 379 (427)
..+..+|....+.||.-.+.....+..|...|..+.-.
T Consensus 165 SAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 165 SATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred hHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHH
Confidence 99899999999999999988887777766555554433
No 244
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.20 E-value=5.1e-05 Score=67.69 Aligned_cols=135 Identities=20% Similarity=0.151 Sum_probs=82.6
Q ss_pred HhcCCChhHHHHHHHH--HHHHHHHhHhhhhcccC-----ccchh-hhhhHHHHHHHHHHHHHhhcCCC------CCchh
Q 014286 255 KSAGLSSGLANVFVGI--ANLLGSVVAMVLMDKLG-----RKALL-QWSFFSMAVSMAIQVAASSSYIP------GSASL 320 (427)
Q Consensus 255 ~~~g~~~~~~~~~~~~--~~~~~~~~~g~l~d~~g-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 320 (427)
.+++.+..+.....++ ...+.++..|+.+|+.+ ||..+ ..+....+.+..+.......... .....
T Consensus 8 vEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~ 87 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL 87 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence 4455555543333332 23356889999999987 66554 44555555555444443322111 11222
Q ss_pred HHHH--HHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 014286 321 YLSV--GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLY 390 (427)
Q Consensus 321 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 390 (427)
+... ..+.+++.+....- +...+++.|..|+++|+++.++.....-+|.+++..+.|.+.+.+......
T Consensus 88 g~~~a~l~F~l~G~G~~~s~-T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~ 158 (403)
T PF03209_consen 88 GLALAALAFLLYGLGVHASG-TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLI 158 (403)
T ss_pred HHHHHHHHHHHHHhhHhHhH-HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHH
Confidence 2222 22333333333332 334448899999999999999999999999999999999999877644333
No 245
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.10 E-value=9.8e-05 Score=68.81 Aligned_cols=155 Identities=21% Similarity=0.201 Sum_probs=99.9
Q ss_pred HHHHHHhcCCChhHHHHHHHHHHH--HHHHhHhhhhcccC-----ccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHH
Q 014286 250 SSSVFKSAGLSSGLANVFVGIANL--LGSVVAMVLMDKLG-----RKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 322 (427)
Q Consensus 250 ~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~g~l~d~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (427)
.+++.+++|.++........+..+ ...++.|.++|-+. ||+.+.++.++..++...+...+... .....
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~----~s~~~ 88 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE----SSAAI 88 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc----chhhh
Confidence 345667789998866666666655 34568999999862 45556666666655555555443311 11122
Q ss_pred HHHHHHHHHHHHhhcccchhhhhccCcC---CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 014286 323 SVGGMLMFVLTFALGAGPVPSLLLPEIF---PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 399 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 399 (427)
..+.+++...+.... -.+..+.+.|.. |.+ +|...+.......+|+.++..+.|.+.+..+++..|.+.+.+..+
T Consensus 89 ~~~~l~la~~g~a~~-DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 89 AVVLLFLASFGYAFA-DVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred HHHHHHHHHHHHHHH-HHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHH
Confidence 222223333322222 222333444543 444 888899999999999999999999999999999999888887777
Q ss_pred HHHHHHHhccC
Q 014286 400 AVAFVKRNVVE 410 (427)
Q Consensus 400 ~~~~~~~~~~~ 410 (427)
..+......+|
T Consensus 167 ~~~~~~~~~~e 177 (433)
T PF03092_consen 167 MLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhh
Confidence 76666666665
No 246
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.04 E-value=0.00056 Score=60.05 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=53.8
Q ss_pred HHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhc-----ccchhHHHHH-h
Q 014286 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRAFQL-C 124 (427)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~d-----r~Grr~~l~~-~ 124 (427)
..+..+.+.+.+.+.-.+... .+|.+.+.=|.|.++. +. .+.....+ ---+.|.++.| |+||||..++ +
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~--a~-fS~ay~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ--AI-FSFAYWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhh--hh-hhhhhhHH-HHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 345666677888899988888 8999988778776665 32 33322232 33578999999 9999987543 4
Q ss_pred hHHHHHHHHHHH
Q 014286 125 ALPMIIGASISA 136 (427)
Q Consensus 125 ~~~~~~~~~~~~ 136 (427)
..+.+...++.+
T Consensus 106 q~llG~~mllLs 117 (510)
T KOG3574|consen 106 QYLLGLFMLLLS 117 (510)
T ss_pred HHHHHHHHHHHh
Confidence 444444444443
No 247
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.04 E-value=0.00015 Score=65.13 Aligned_cols=158 Identities=18% Similarity=0.117 Sum_probs=95.5
Q ss_pred cchhHHHHHHHHHHhhh---ccchhHHHHhHHHHHHhcCCChh--HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhH
Q 014286 223 RHFRVVFIGSTLFALQQ---LSGINAIFYFSSSVFKSAGLSSG--LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 297 (427)
Q Consensus 223 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 297 (427)
+++|..++...+..+.+ +..+..+..+.. +.+|.+.. +...++.+..++..+.+-|+.||+|-|....++..
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~---~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVN---SFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHH---HHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 44555555554444433 222333333333 33442222 67778888888989999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 014286 298 SMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF 377 (427)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~ 377 (427)
+.+++..+=........++.....+...+..+......... ....-...-.+|+++|++|..+..+...+|.+++..+.
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim-~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llp 196 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFIL-GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLP 196 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhh-ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcc
Confidence 99888776554433221122221233333333333222211 12121344568999999999999998889988888877
Q ss_pred HHHHHHh
Q 014286 378 LRLLEQL 384 (427)
Q Consensus 378 g~l~~~~ 384 (427)
..+..+.
T Consensus 197 pilV~~~ 203 (480)
T KOG2563|consen 197 PILVPSS 203 (480)
T ss_pred ceecCCC
Confidence 7666543
No 248
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=0.00019 Score=62.79 Aligned_cols=137 Identities=22% Similarity=0.193 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
++......+..+++...|.++|++|||+.........++...+-...+++. .++.+=...+++.+..|..
T Consensus 117 llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~----------~L~~f~~l~~~g~gg~pv~ 186 (528)
T KOG0253|consen 117 LLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFA----------SLCVFRALWGFGVGGLPVD 186 (528)
T ss_pred HHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCee----------hhhHHHHHHhccCCCccHh
Confidence 566667788899999999999999999988887777766655554443322 2222333344444557777
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhccCC
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 411 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (427)
.++-.|..|..+|+.-+=+. +...+|.+....+.-....+.||++.+........+.+ ..+++.+|.
T Consensus 187 ~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a-~f~~w~~ES 253 (528)
T KOG0253|consen 187 SAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAA-RFLVWVYES 253 (528)
T ss_pred HHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHH-HHHhhcccC
Confidence 77888999988888877666 77888999999888888889999987766665444443 334556654
No 249
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.00 E-value=2e-05 Score=69.99 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=69.3
Q ss_pred cchhhhhhhc---cCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHH
Q 014286 71 NEPLESISLD---LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (427)
Q Consensus 71 ~~~~~~i~~~---~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 147 (427)
....+.+.+| +|++.++. ++..+.+..+..+|.+..+++.||+|+|+++.++.++..++.++....++...+ .+
T Consensus 160 ~~w~~~yl~~~~~~g~s~~~a--~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~ 236 (310)
T TIGR01272 160 GSFLVNFLSDPHALGLPEDQA--AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WF 236 (310)
T ss_pred HHHHHHHHHhcccCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HH
Confidence 3344544443 56655555 899999999999999999999999999999988888888877666665543332 34
Q ss_pred HHHHhhhccccccceeeccc
Q 014286 148 RFVVGTGMGLGPTVAALYVT 167 (427)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~ 167 (427)
-++.|++.+..+|...+...
T Consensus 237 ~~l~g~~~s~i~P~~~s~a~ 256 (310)
T TIGR01272 237 VLALGLFNSIMFPTIFSLAL 256 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55788888888887654443
No 250
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.95 E-value=0.00036 Score=64.16 Aligned_cols=166 Identities=20% Similarity=0.245 Sum_probs=105.6
Q ss_pred hHHHHhHH-HHHHhcCCChhHHHHHHHH---HHHHHHHhHhhhhcc----cCcc-chhhhhhHHHHHHHHHHHHHhhcCC
Q 014286 244 NAIFYFSS-SVFKSAGLSSGLANVFVGI---ANLLGSVVAMVLMDK----LGRK-ALLQWSFFSMAVSMAIQVAASSSYI 314 (427)
Q Consensus 244 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~---~~~~~~~~~g~l~d~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
.....|+. ++.+..|.++.....++.+ .-.+.-++.|.++|| +||+ +-++.+.+..++...++...+...
T Consensus 29 ~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~- 107 (467)
T COG2211 29 GIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFS- 107 (467)
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcc-
Confidence 33334444 4446688998865555554 455677799999997 5654 445556566666666655544321
Q ss_pred CCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cc
Q 014286 315 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-------GP 386 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-------g~ 386 (427)
.........+...++..++.....|-.. +..|.. .+++|.+..+.-..+..+|..+...+.+++.... ||
T Consensus 108 -~~~k~~ya~vtY~l~~l~YT~vniPy~a-l~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~ 185 (467)
T COG2211 108 -MTGKLIYALVTYMLLGLGYTLVNIPYGA-LGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGY 185 (467)
T ss_pred -cCcchHHHHHHHHHHHHHHHheeCchhh-cchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhH
Confidence 2334444555566667777766655544 555543 3578999999999999999888888888887654 45
Q ss_pred chhHHHHHHHHHHHHHHHHHhccCCC
Q 014286 387 QLLYSIFGTFCLMAVAFVKRNVVETK 412 (427)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (427)
.....+++++..+..+.+++..+|+.
T Consensus 186 ~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 186 QGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 55555555566666666666666653
No 251
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.91 E-value=0.00023 Score=65.46 Aligned_cols=124 Identities=16% Similarity=0.151 Sum_probs=73.3
Q ss_pred chhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccC-ccchhhhhhHHHHHHHHHHHHHhhcCCCCC
Q 014286 242 GINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLG-RKALLQWSFFSMAVSMAIQVAASSSYIPGS 317 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
.+.....|.+.++++.|++.. .......+..+++.++.|.++||.+ +|+.+.+..++.++..........
T Consensus 17 ~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~------ 90 (400)
T PF03825_consen 17 AYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSS------ 90 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 344444556777888898876 4566666778889999999999986 566666665555554444332211
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014286 318 ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 376 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 376 (427)
.+..+..+.++...+ ....|...++..+... +++.-.|-....+.+|-+++...
T Consensus 91 --f~~~~~~~~l~~~~~-~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 91 --FWWLFVIMLLFSFFF-SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred --HHHHHHHHHHHHHHH-ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 123333333333333 2334555555555443 34455666666677776666544
No 252
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.87 E-value=3.3e-05 Score=68.63 Aligned_cols=104 Identities=30% Similarity=0.409 Sum_probs=84.9
Q ss_pred cccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhh--hH
Q 014286 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN--LI 142 (427)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~ 142 (427)
++.....+..+.+..+++.+......++..+.+.++..+++++.|.++||+|||+.+..+.....++.+++++..+ .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHH
Confidence 5556666778888888775432023389999999999999999999999999999988888777777778888776 89
Q ss_pred HHHHHHHHHhhhccccccceeecccC
Q 014286 143 GMLLGRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
.+++.|+++|++.+...+....++.|
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~ 121 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSE 121 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 99999999999999888887777776
No 253
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.75 E-value=0.004 Score=58.68 Aligned_cols=143 Identities=14% Similarity=0.159 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHH-HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 264 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM-AVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
...+..+...+..++.|-++|+-++||.+...+... .++...+.+.. +...+...+..++...++... ....
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~------~~~~~~~~~l~iia~v~~~~~-~vfy 147 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVS------PGQWWLALVLFIIANVGYEAS-NVFY 147 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhC------cchHHHHHHHHHHHHHHHHHH-HHHH
Confidence 344555666677788899999998776665544444 34444444431 112233333333334444332 3344
Q ss_pred hhhccCcCCccch--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------ccch
Q 014286 343 SLLLPEIFPSRIR--------------------------AKAMAVCMSVHWVINFFVGLLFLRLLEQL--------GPQL 388 (427)
Q Consensus 343 ~~~~~~~~p~~~~--------------------------g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--------g~~~ 388 (427)
.++..|+.+++.+ ++..+.-...+++|+.+.-.+.-.+.... ..+.
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 5588888888877 99999999999999888776654443322 2366
Q ss_pred hHHHHHHHHHHHHHHHHHhccCCCC
Q 014286 389 LYSIFGTFCLMAVAFVKRNVVETKG 413 (427)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (427)
.+.+.++..++..+-.+++.|++++
T Consensus 228 ~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 228 AFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 6777777777777777677776643
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.61 E-value=0.004 Score=48.51 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
....+......++.++.+.+.+++|.|+.+.++.+...+-....... +.+..+....+.+.+.+..+.+..
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~---------~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP---------NSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHhhhhHHhhHhhh
Confidence 44555566677778888999999999999999888777554443221 124556666677777776665555
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRL 380 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 380 (427)
. ++.+...++.+++-.++...+...+.++|..+.-.+
T Consensus 112 ~-ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 112 T-YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred H-HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 788888888999999999998888877777665443
No 255
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.00017 Score=64.82 Aligned_cols=70 Identities=19% Similarity=0.171 Sum_probs=49.5
Q ss_pred hhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc----cchhHHHHH-hhHHHHHHHHHHHhhhhhHHH
Q 014286 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQL-CALPMIIGASISATTRNLIGM 144 (427)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr----~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~l 144 (427)
.+|.+..++|++..-. +.+--.-.+...+.||+.|..+|| |||||.++. +.++..++.++.++++++..+
T Consensus 54 y~tPyl~~lGvphk~~--S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~ 128 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWS--SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLL 128 (498)
T ss_pred cccHHHHHcCCCcccc--cccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHH
Confidence 4566667777754433 555555566777899999999995 898887755 556667778888888776554
No 256
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.56 E-value=8.8e-05 Score=66.18 Aligned_cols=113 Identities=15% Similarity=0.204 Sum_probs=84.9
Q ss_pred HHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHH
Q 014286 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (427)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 132 (427)
.+++.-..+.++.+. ++...-..-.+++|++..+. .++.-...+..++|++++|+|.||+|.|+++..+++++.+.+
T Consensus 256 ~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~l--ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 256 LFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTEL--LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred HHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 444444445555543 22222223345899876665 777778888999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhccccccceeecccC
Q 014286 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
+..-+...-..+.++-.+.|...|+....+-++..+
T Consensus 333 ~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~ 368 (438)
T COG2270 333 LYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLAR 368 (438)
T ss_pred HHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 988887777777788888999998888777666665
No 257
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.55 E-value=0.00043 Score=58.56 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=68.8
Q ss_pred ccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhh-------hh
Q 014286 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-------RN 140 (427)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~ 140 (427)
..++..-|++++.+|++.++. ..+.+.-.+|..+| ++.|.+.|++|+|.++.+|.+...+|..+..++ .+
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l--~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~ 95 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQL--NTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLP 95 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHH--HHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccc
Confidence 344556789999999865555 78888999998875 889999999999999999999999998877653 36
Q ss_pred hHHHHHHHHHHhhhccc
Q 014286 141 LIGMLLGRFVVGTGMGL 157 (427)
Q Consensus 141 ~~~l~~~r~l~G~~~g~ 157 (427)
+|.+.+..++.|.+.+.
T Consensus 96 ~~~~~~~~~l~~~s~~~ 112 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCW 112 (250)
T ss_pred hHHHHHHHHHHcccHHH
Confidence 77777777777766443
No 258
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.20 E-value=0.049 Score=51.01 Aligned_cols=106 Identities=9% Similarity=-0.078 Sum_probs=69.5
Q ss_pred HHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCC--C--------------c-------hhHHHHHHHHHHHH
Q 014286 276 SVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPG--S--------------A-------SLYLSVGGMLMFVL 332 (427)
Q Consensus 276 ~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~-------~~~~~~~~~~~~~~ 332 (427)
.++.+++++|++|+++...........+.++++......+. . . ..|... ...+..-
T Consensus 61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~-~FYv~~e 139 (472)
T TIGR00769 61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFA-LFYVMAE 139 (472)
T ss_pred HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHH-HHHHHHH
Confidence 67789999999999888776666665555555442211100 0 0 011111 1111222
Q ss_pred HHhhcccc-hhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 333 TFALGAGP-VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 382 (427)
Q Consensus 333 ~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 382 (427)
.++....+ +.+.+++|++..++..+-.++....+++|..+++.+...+.+
T Consensus 140 lw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 140 LWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233 778899999999999999999999999999999999888763
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.18 E-value=0.002 Score=43.43 Aligned_cols=56 Identities=18% Similarity=0.319 Sum_probs=42.2
Q ss_pred chhHHHHhHHHHHHhcCCChhH---HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhH
Q 014286 242 GINAIFYFSSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 297 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 297 (427)
......-|.+.+.++.|+++.. ...+..+..+++.++.|+++||.++++.......
T Consensus 15 ~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 4555556677777889999884 5555556778899999999999998877665443
No 260
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.06 E-value=0.0013 Score=55.54 Aligned_cols=114 Identities=15% Similarity=0.102 Sum_probs=72.5
Q ss_pred HHHHHHHHHHhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH
Q 014286 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (427)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 128 (427)
.+.++.++|..+....+..-..++. .+++.+|+|.... +-+.+....-.++.+++.|.++||+|++-..+.+..+.
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg~~--fF~~rfGlS~~~a--~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~ 340 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLGPM--FFQKRFGLSAVSA--GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACIL 340 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhHH--HHHHhhCCChhhc--cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHH
Confidence 3445666676666555544333332 5788999976665 77777777777889999999999999998877765544
Q ss_pred HH-HHHHHHhhhhhHHHHHHHHHHhhhcc----ccccceeecccC
Q 014286 129 II-GASISATTRNLIGMLLGRFVVGTGMG----LGPTVAALYVTE 168 (427)
Q Consensus 129 ~~-~~~~~~~~~~~~~l~~~r~l~G~~~g----~~~~~~~~~i~~ 168 (427)
.+ +-....+ +++.=.+...+.|+..+ ..+|....+++|
T Consensus 341 tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE 383 (459)
T KOG4686|consen 341 TLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPE 383 (459)
T ss_pred HHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH
Confidence 43 3222222 22222344555666544 356666666666
No 261
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.00 E-value=0.062 Score=49.73 Aligned_cols=142 Identities=12% Similarity=0.029 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHH----HHHHHHHhhcCCCC---CchhHHHHHHHHHHHHHHh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVS----MAIQVAASSSYIPG---SASLYLSVGGMLMFVLTFA 335 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 335 (427)
.....-.+..++.+...|...||..|.+....+.+..-++ ..++.......... .......+....+.+....
T Consensus 42 iygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 121 (432)
T PF06963_consen 42 IYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIER 121 (432)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHH
Confidence 4555566677777888899999999988776664433222 22222222111111 1111122222222222111
Q ss_pred hcccchhhh----hccCcC--CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHH
Q 014286 336 LGAGPVPSL----LLPEIF--PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 336 ~~~~~~~~~----~~~~~~--p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
........+ .+..+. +++......+...-+=.+...++|.+.|.+.+..++.....+.++..+++..+=
T Consensus 122 Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vE 196 (432)
T PF06963_consen 122 LASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVE 196 (432)
T ss_pred HHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHH
Confidence 111111100 111122 233444455555555556899999999999998888877777777777766553
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.98 E-value=0.015 Score=52.80 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccce
Q 014286 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVA 162 (427)
Q Consensus 92 ~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 162 (427)
.+.-+-.+...+..+.+.++.+|+..+.=.....+++.++.++.++++|.+.=+++-.+.+++.|......
T Consensus 63 ~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tf 133 (402)
T PF02487_consen 63 AVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTF 133 (402)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHH
Confidence 34444445555666667777777765444555666777788888888888877777777777776554433
No 263
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.82 E-value=0.049 Score=47.97 Aligned_cols=129 Identities=24% Similarity=0.186 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccch
Q 014286 262 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 341 (427)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (427)
........+...++.+..|++.||.|||+.+..+......+.+...+... ...+.........+.+.+ ...+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~-~~~~~ 114 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------VGLALLLILRLLQGLGGG-GLLPV 114 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------chHHHHHHHHHHHHhhhH-HHHHH
Confidence 35666667777777799999999999997777666543333233332221 111222222222222222 34566
Q ss_pred hhhhccCcCCc-cchhhHHHHHHH-HHHHHHHHHHHHHHHHHHH--hccchhHHHHHHHH
Q 014286 342 PSLLLPEIFPS-RIRAKAMAVCMS-VHWVINFFVGLLFLRLLEQ--LGPQLLYSIFGTFC 397 (427)
Q Consensus 342 ~~~~~~~~~p~-~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~~ 397 (427)
...+..|..|. +.|+...+.... ...++..+++.+.+.+... .+|+..+.......
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 115 ASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 66688898887 578888888888 5777888888777766654 35665444444333
No 264
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.81 E-value=0.072 Score=48.55 Aligned_cols=157 Identities=13% Similarity=-0.010 Sum_probs=95.8
Q ss_pred hhHHHHhHHHHHHh-cCCChh----HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCC
Q 014286 243 INAIFYFSSSVFKS-AGLSSG----LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGS 317 (427)
Q Consensus 243 ~~~~~~~~~~~~~~-~g~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
-..-++..|++.+. .+++.. .+.-...=..++.-+....+.|..+.|++++.+.+...+...++.+....
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv----- 94 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSV----- 94 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcH-----
Confidence 34455666677665 677766 12222333445556677889999999999999888887777776665431
Q ss_pred chhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHH
Q 014286 318 ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--PQLLYSIFGT 395 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~ 395 (427)
+...+.-+.++...+ .-...++++-...|+++--++.+.......+|..++..++-.+....+ +.....+..+
T Consensus 95 ---~~mq~~q~~yg~~~a--~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~ 169 (412)
T PF01770_consen 95 ---LAMQLMQFFYGLATA--AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLA 169 (412)
T ss_pred ---HHHHHHHHHHHHHHH--HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 222333333333332 233444567777788888899999999988888888887776666333 3333333333
Q ss_pred HHHHHHHHHHHhccC
Q 014286 396 FCLMAVAFVKRNVVE 410 (427)
Q Consensus 396 ~~~~~~~~~~~~~~~ 410 (427)
...++.++. +++|.
T Consensus 170 ~~~~a~~~~-~fLP~ 183 (412)
T PF01770_consen 170 SVSLALLIA-LFLPM 183 (412)
T ss_pred HHHHHHHHH-HHcCC
Confidence 333333333 33443
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.81 E-value=0.0003 Score=67.13 Aligned_cols=172 Identities=14% Similarity=0.011 Sum_probs=1.0
Q ss_pred HhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhc
Q 014286 236 ALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS 312 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (427)
.+.+...........+.+.++++++.. .+...+-++.++..++..++.+|..|-+.+-.+.++++++.+++.+....
T Consensus 12 ~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~ 91 (539)
T PF03137_consen 12 GLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFL 91 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhh
Confidence 333344455555556777788888776 56666778888888888899998888788888888888888877653321
Q ss_pred CCCC--------------------------------------CchhHHHHHHHHHHHHHHhhc---ccchhhhhccCcCC
Q 014286 313 YIPG--------------------------------------SASLYLSVGGMLMFVLTFALG---AGPVPSLLLPEIFP 351 (427)
Q Consensus 313 ~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p 351 (427)
.... ..........+++..+..+++ ..++..+|+.|..+
T Consensus 92 ~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~ 171 (539)
T PF03137_consen 92 SGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVS 171 (539)
T ss_dssp ------------------------------------------------------------SSS-----------------
T ss_pred cCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccc
Confidence 1000 000111122222222223333 34667779999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------hc-cchhHHHHHHHHHHHHHHHHHh
Q 014286 352 SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ---------------------LG-PQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 352 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
++..+...|+..+...+|-++|-.+++..... .| |+..|++.+.+.++.++....+
T Consensus 172 ~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 172 KKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999888888887777655431 12 6667777777777666655444
No 266
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.81 E-value=0.024 Score=55.24 Aligned_cols=178 Identities=14% Similarity=-0.005 Sum_probs=112.5
Q ss_pred HHHHHHhhhccchhHHHHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHH
Q 014286 231 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 307 (427)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 307 (427)
+..+..+.+......+......+-+.++++.. ++...+-++..+......+...|..|-+.+-++.++++++.++..
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~a 180 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFA 180 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHh
Confidence 33333333333334455556666677777766 444555677777777888888898888889999999999888877
Q ss_pred HHhhcCC---------------C---------------------C----CchhHHHHHHHHHHHHHHhhc---ccchhhh
Q 014286 308 AASSSYI---------------P---------------------G----SASLYLSVGGMLMFVLTFALG---AGPVPSL 344 (427)
Q Consensus 308 ~~~~~~~---------------~---------------------~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 344 (427)
+...... . + ........+.+++..+..+++ ..++..+
T Consensus 181 lPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGis 260 (735)
T KOG3626|consen 181 LPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGIS 260 (735)
T ss_pred ChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCc
Confidence 6521110 0 0 011111111122222222222 3456667
Q ss_pred hccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------c-cchhHHHHHHHHHHHHHHHH
Q 014286 345 LLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL------------------G-PQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 345 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~------------------g-~~~~~~~~~~~~~~~~~~~~ 405 (427)
|+.|...+++.+...|+..++..+|-++|-.+++.+...+ | |+..|++.+.+.++.++..+
T Consensus 261 YiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f 340 (735)
T KOG3626|consen 261 YIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF 340 (735)
T ss_pred cccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988888887777765421 2 66678888888777776665
Q ss_pred Hhc
Q 014286 406 RNV 408 (427)
Q Consensus 406 ~~~ 408 (427)
++-
T Consensus 341 ~fP 343 (735)
T KOG3626|consen 341 FFP 343 (735)
T ss_pred hCc
Confidence 443
No 267
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.80 E-value=0.0084 Score=55.01 Aligned_cols=116 Identities=12% Similarity=0.021 Sum_probs=78.3
Q ss_pred chhhhhhHHHHHHHHHHHHHhhcCCC-CCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCcc---chhhHHHHHHHH
Q 014286 290 ALLQWSFFSMAVSMAIQVAASSSYIP-GSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSR---IRAKAMAVCMSV 365 (427)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~ 365 (427)
+++..+.++..++.+++......... .........+++.+...+.+ +.-|....+..|.++++ +|.+....+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G-~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTG-GIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHH-CCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccc-cccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 46677888888888886665543322 12223344555555555544 33455555888887755 466777888999
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHH
Q 014286 366 HWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 406 (427)
Q Consensus 366 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 406 (427)
.++|..+++.+.+++.++.||...|.+.++..+++.+..+.
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888888877666543
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.71 E-value=0.0091 Score=46.54 Aligned_cols=74 Identities=19% Similarity=0.177 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccC
Q 014286 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 94 ~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
.++......+++++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-.+.|++.+..++....++.+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 455566677888889999999999999999999998655543 56778899999999999999998887776665
No 269
>PRK03612 spermidine synthase; Provisional
Probab=96.64 E-value=0.054 Score=51.81 Aligned_cols=51 Identities=22% Similarity=0.271 Sum_probs=36.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhccchhHHHHHHHHHHHHHHH
Q 014286 354 IRAKAMAVCMSVHWVINFFVGLLFLRLLE-QLGPQLLYSIFGTFCLMAVAFV 404 (427)
Q Consensus 354 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~g~~~~~~~~~~~~~~~~~~~ 404 (427)
..|...|-.+....+|+++|+.+.+.+.- ..|......+.+.+.++.+++.
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 35677888899999999999999888654 6786666666666555544333
No 270
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.22 E-value=0.89 Score=44.04 Aligned_cols=98 Identities=17% Similarity=0.229 Sum_probs=71.9
Q ss_pred ccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhccc-chhHHHHHhhHHHHHHHHHHHhhhhh-----
Q 014286 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTRNL----- 141 (427)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~----- 141 (427)
++..+.+..+.+++|.+.... .-..+.+.-......+..++++|-| ||-+++.++.++..++..+..++...
T Consensus 55 g~~~nlv~ylt~~~~~~~~~a--a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGGA--ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred cchhHHHHHHHHHhccchHHH--HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 345667788888988765444 6677788888888889999999975 89999999999998886655443222
Q ss_pred --------------------HHHHHHHHHHhhhccccccceeeccc
Q 014286 142 --------------------IGMLLGRFVVGTGMGLGPTVAALYVT 167 (427)
Q Consensus 142 --------------------~~l~~~r~l~G~~~g~~~~~~~~~i~ 167 (427)
..+..+.-+..+|.|+.-+....+-+
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGa 178 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGA 178 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcc
Confidence 23555666777788877777666655
No 271
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.19 E-value=0.13 Score=45.19 Aligned_cols=298 Identities=12% Similarity=0.117 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccC--Cchh
Q 014286 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE--SPHW 172 (427)
Q Consensus 95 s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~--~~~~ 172 (427)
-+..-.+.+.-++.=.+.|..-.|++++.-.+.......+.-+.++.+.+-+.-+..|...+... +-++++-+ .|..
T Consensus 49 PvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEI-AYysYIYs~Vd~~~ 127 (433)
T KOG3810|consen 49 PVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEI-AYYSYIYSKVDPEM 127 (433)
T ss_pred cchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHH-hhhheeeeecCHHH
Confidence 34445566666777788999999999988888888888888899999998888888888765433 22333331 1111
Q ss_pred hhhcCChHHHHHHHHHHhC---------------------------------C--CchhhHHHHHhhhhc------CCCC
Q 014286 173 LYKKGRTAEAEAEFEKLLG---------------------------------G--SHVKSSLAELSKLDR------GDDG 211 (427)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~---------------------------------~--~~~~~~~~~~~~~~~------~~~~ 211 (427)
+-.....-++....+...+ . +..++.....+.+++ ++..
T Consensus 128 Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~ 207 (433)
T KOG3810|consen 128 YKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMN 207 (433)
T ss_pred HHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcC
Confidence 1110000011100110000 0 000100000000000 0000
Q ss_pred Ccch---------------hHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCCh-h----HHHHHHHHH
Q 014286 212 DIVK---------------FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS-G----LANVFVGIA 271 (427)
Q Consensus 212 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~----~~~~~~~~~ 271 (427)
.+.+ +.+..++|.. +...++.....+++.-..+|.+.+-+...-++ . ..-++..+.
T Consensus 208 ~~~~~~~~l~~~~~~l~~~l~~~y~np~l----l~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlL 283 (433)
T KOG3810|consen 208 PQASYMSYLRGAFVLLWRDLQECYSNPRL----LKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLL 283 (433)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCchh----hhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHH
Confidence 1111 1122333332 22334444444466666777777766653211 1 344555667
Q ss_pred HHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCC
Q 014286 272 NLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP 351 (427)
Q Consensus 272 ~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 351 (427)
++++.+..|.+.-.+.|..-+.++......+.+++... .+.+.|...+...++...+.....-... -+++...
T Consensus 284 Ga~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~------~t~~Iw~~Ya~yvlfr~~y~l~itiA~~-~iA~nL~ 356 (433)
T KOG3810|consen 284 GAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMA------QTQHIWVCYAGYVLFRVIYQLTITIATF-QIARNLS 356 (433)
T ss_pred HHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhh------cccceehhhhhHHHHHhhHhhhhhHHHH-HHHHhhh
Confidence 77888889999777776644433333222222222221 2344567777777777666654443333 4444445
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------cchhHHHHHHHHHHHHHHHHHh
Q 014286 352 SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-----------PQLLYSIFGTFCLMAVAFVKRN 407 (427)
Q Consensus 352 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~ 407 (427)
.+.-|...|+..++.-+-..+-..+ ..|..| |...|.+.+++.++...+.+..
T Consensus 357 ~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 357 SELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 6778889998777665544443332 234222 4556888888888876655433
No 272
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.99 E-value=0.27 Score=48.42 Aligned_cols=94 Identities=16% Similarity=0.193 Sum_probs=67.4
Q ss_pred hhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcc-cchhHHHHHhhHHHHHHHHHHHhhhh--------hHH
Q 014286 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRN--------LIG 143 (427)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~ 143 (427)
+.-.+.+.+|.+.+.. ..+...+....-+..++.|.++|+ +||++.+.++.+++.++.++.+++.. ...
T Consensus 10 LvlYl~~~lg~~~~~A--~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 10 LVLYFLNFLGFSESTS--TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 3445556677765555 567777777778888999999997 69999999999999999888877421 123
Q ss_pred HHHHHHHHhhhccccccceeecccC
Q 014286 144 MLLGRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 144 l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
.+++-.+..+|.|+.-+...+...|
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gd 112 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGD 112 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHh
Confidence 4556666677777776666555544
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.73 E-value=1 Score=40.95 Aligned_cols=102 Identities=9% Similarity=-0.138 Sum_probs=46.8
Q ss_pred cccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHH---HHHHHHHHhh---
Q 014286 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM---IIGASISATT--- 138 (427)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~---~~~~~~~~~~--- 138 (427)
.....+....+.+.+++-....+ ....+.+.+...+..++...+--+..-|....++..++ .+....+.++
T Consensus 32 lpWN~fiTa~~y~~~~~~~~~~~---~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~~~~v~ 108 (406)
T KOG1479|consen 32 LPWNMFITASDYYYYRFPGYHNS---KNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLDLALVK 108 (406)
T ss_pred cchHhhhccHHHHHhhcCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34445555667777776533231 33444444444444444444333333222111211111 1112222221
Q ss_pred ------hhhHHHHHHHHHHhhhccccccceeecccCC
Q 014286 139 ------RNLIGMLLGRFVVGTGMGLGPTVAALYVTES 169 (427)
Q Consensus 139 ------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 169 (427)
..+...++.-.+.|++.|..........++-
T Consensus 109 ~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~ 145 (406)
T KOG1479|consen 109 TDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF 145 (406)
T ss_pred cCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC
Confidence 2455566667777777776665555555543
No 274
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.30 E-value=1.6 Score=38.35 Aligned_cols=70 Identities=13% Similarity=0.111 Sum_probs=54.6
Q ss_pred HHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccccccceeecccC
Q 014286 98 LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (427)
Q Consensus 98 ~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (427)
.+..+...++.+.+..++|.|+++.++...+... +..-+-+.+..++-.-.+.|+|.+..+..-.+|+.+
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~ 137 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTP 137 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecH
Confidence 4455566677779999999999999888777653 223344678889999999999999999888888776
No 275
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.15 E-value=0.22 Score=34.04 Aligned_cols=65 Identities=18% Similarity=0.121 Sum_probs=54.2
Q ss_pred HHhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhh
Q 014286 247 FYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 311 (427)
Q Consensus 247 ~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
.-.+|.+.++.+++.. ++.....++.++|.+...++.++..+++.+..+.+...+..+.+.+..+
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3457888888888877 6888888999999999999999988888888888888888888776543
No 276
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.64 E-value=1.6 Score=37.12 Aligned_cols=27 Identities=4% Similarity=0.074 Sum_probs=19.0
Q ss_pred CCcchhHhhhcccchhHHHHHHHHHHh
Q 014286 211 GDIVKFEELLYGRHFRVVFIGSTLFAL 237 (427)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
..+.+..+.+|++..|...+.+.....
T Consensus 82 ~~~~s~~~~LK~K~tw~w~~~Yg~wLv 108 (267)
T PF07672_consen 82 SKKPSYKSILKEKETWKWILIYGIWLV 108 (267)
T ss_pred cccchHHHHHccchHHHHHHHHHHHhe
Confidence 345778899999988876666555443
No 277
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.37 E-value=0.5 Score=44.01 Aligned_cols=106 Identities=10% Similarity=-0.012 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 342 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (427)
....+......+..++.+.+.|+.+.|+.+.++..........+.... .+.......+.+++.+..+..-.
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N---------~y~~yfssallG~Gaallw~GqG 124 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN---------SYYLYFSSALLGFGAALLWTGQG 124 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc---------hHHHHHHHHHhhhhHHheecccc
Confidence 446666777788899999999999999999998887776655544322 25667777777877776555555
Q ss_pred hhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 014286 343 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFL 378 (427)
Q Consensus 343 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g 378 (427)
. +.+|...++...+..++...+...+.++|..+.-
T Consensus 125 ~-ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 125 G-YLTSNSTRETIERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred e-ehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhe
Confidence 5 8899888899999999999999888887766543
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.75 E-value=0.096 Score=47.85 Aligned_cols=149 Identities=16% Similarity=0.121 Sum_probs=85.3
Q ss_pred HHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChhHHHHH---HHHHHHHHHHhHhhhhcc----cCccchhh-hhhHHH
Q 014286 228 VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVF---VGIANLLGSVVAMVLMDK----LGRKALLQ-WSFFSM 299 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~g~l~d~----~g~~~~~~-~~~~~~ 299 (427)
++....+....+++ +..-..|.+.+.+..|.+..+...+ .-+.+++.+++.|..+|| +||||..+ .+....
T Consensus 34 li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i 112 (498)
T KOG0637|consen 34 LISVASIAAGVQFG-WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLI 112 (498)
T ss_pred HHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHH
Confidence 33333344444443 4445556666677788887744333 335566778889999996 68766554 455555
Q ss_pred HHHHHHHHHHhhcCC---CCCch------hHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhh-HHHHHHHHHHHH
Q 014286 300 AVSMAIQVAASSSYI---PGSAS------LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAK-AMAVCMSVHWVI 369 (427)
Q Consensus 300 ~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~-~~g~~~~~~~~g 369 (427)
.++.+++.+...... ++... ....++.+.+.-+.......|.=. +..|+..++.+.+ +.+.+..+..+|
T Consensus 113 ~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra-~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 113 AVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRA-LLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHH-HHHHhccChhhhhccchhHHHHHHhc
Confidence 666666665442211 11111 112222223333333333345544 7888776666666 999999988888
Q ss_pred HHHHHHHHH
Q 014286 370 NFFVGLLFL 378 (427)
Q Consensus 370 ~~~~~~~~g 378 (427)
+.+|=.+.+
T Consensus 192 nvLGY~~g~ 200 (498)
T KOG0637|consen 192 NVLGYALGS 200 (498)
T ss_pred ceeeeeccc
Confidence 888765554
No 279
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.68 E-value=2.8 Score=40.76 Aligned_cols=158 Identities=13% Similarity=0.099 Sum_probs=93.3
Q ss_pred HhHHHHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcc-cCccchhhhhhHHHHHHHHHHHHHhhcCCC--------
Q 014286 248 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIP-------- 315 (427)
Q Consensus 248 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 315 (427)
....++....+.... ..............+++++++|- +||-+++.++.++..++..++.........
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 334444444444433 33333444455667889999997 589899998888888886665554432210
Q ss_pred -C-----C-chhHHHHHHHHHHHHHHh-hcccchhhhhccCcCC----ccch--hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 316 -G-----S-ASLYLSVGGMLMFVLTFA-LGAGPVPSLLLPEIFP----SRIR--AKAMAVCMSVHWVINFFVGLLFLRLL 381 (427)
Q Consensus 316 -~-----~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p----~~~~--g~~~g~~~~~~~~g~~~~~~~~g~l~ 381 (427)
. . ......++...+.....+ .+.-|....+-+|-++ .+.+ ..-........+.|..++..+.-+.-
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq 218 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ 218 (571)
T ss_pred CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh
Confidence 0 0 111111222222222212 2334555557777776 2222 35566677777888888888888887
Q ss_pred HHhccchhHHHHHHHHHHHHHHHH
Q 014286 382 EQLGPQLLYSIFGTFCLMAVAFVK 405 (427)
Q Consensus 382 ~~~g~~~~~~~~~~~~~~~~~~~~ 405 (427)
++.||...|.+..++..++.++..
T Consensus 219 ~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 219 DNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hcccceeeccHHHHHHHHHHHHHH
Confidence 889999999888887777665553
No 280
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.54 E-value=1.2 Score=40.69 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhh
Q 014286 264 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPS 343 (427)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (427)
+...-.+-.++..++..++.+|+.-+.-......+..+++++..+..+ .+.-+++..+.....+.+-.....
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~--------v~~~l~Gv~las~ssg~GE~tfL~ 135 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS--------VWVRLLGVVLASLSSGLGEVTFLS 135 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc--------hhHHHHHHHHHhhhhhhhHHHHHH
Confidence 455555666777788899999887554455555566667666655332 234455555555544443333222
Q ss_pred hhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHHHhcc
Q 014286 344 LLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--PQLLYSIFGTFCLMAVAFVKRNVV 409 (427)
Q Consensus 344 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~ 409 (427)
+ ...+|+. ..+-....-..++.+|+...-.+.+ .| .+..+.+...+.++..+..++.++
T Consensus 136 -l-t~~y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 136 -L-THFYGKS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLP 196 (402)
T ss_pred -H-HHhcCcc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3 3455532 2333333334456666665555544 55 355666655555444444444443
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.44 E-value=0.26 Score=41.81 Aligned_cols=154 Identities=15% Similarity=0.128 Sum_probs=70.6
Q ss_pred HHHHhcCCChh---HHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHH
Q 014286 252 SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 328 (427)
Q Consensus 252 ~~~~~~g~~~~---~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
++.+.+|+..+ ..+.......++...+.|-+.||.|||+..+.-++...++ ....... + ...+.++-.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs----CiTKhSp---q--YkVLmVGR~ 132 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS----CITKHSP---Q--YKVLMVGRV 132 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH----HHhhcCC---c--eEEEeehhh
Confidence 44455666554 2333222334455566788999999998665544433333 3322111 0 011222222
Q ss_pred HHHHHHhhcccch-hhhhccCcC-----CccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHH
Q 014286 329 MFVLTFALGAGPV-PSLLLPEIF-----PSRIRAKAMAVCMSVH-WVINFFVGLLFLRLLEQLG--PQLLYSIFGTFCLM 399 (427)
Q Consensus 329 ~~~~~~~~~~~~~-~~~~~~~~~-----p~~~~g~~~g~~~~~~-~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~ 399 (427)
+.++.-+..+... .+ ++.|.. |.+......+=...++ .+-.+++...+..+.|.++ +-.+|-..+.+..+
T Consensus 133 LGGiaTsLLFSaFEsW-liaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLai 211 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESW-LIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAI 211 (454)
T ss_pred hhhHHHHHHHHHHHHH-HHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHH
Confidence 2222222222111 23 666653 2222222222222222 2344555555556666654 55667665555555
Q ss_pred HHHHHHHhccCCCCCC
Q 014286 400 AVAFVKRNVVETKGKS 415 (427)
Q Consensus 400 ~~~~~~~~~~~~~~~~ 415 (427)
+..+...-..|..++.
T Consensus 212 gmAvil~~W~ENygdp 227 (454)
T KOG4332|consen 212 GMAVILSSWSENYGDP 227 (454)
T ss_pred HHHHHHhhhhhccCCh
Confidence 5555554455555443
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.35 E-value=7.1 Score=36.67 Aligned_cols=112 Identities=13% Similarity=0.033 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHhHhhhhcccCcc-chhhhhhHHHHHHHHHHHHHhhcCC-C---CCchhHHHHHHHHHHHHHHhhc
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKLGRK-ALLQWSFFSMAVSMAIQVAASSSYI-P---GSASLYLSVGGMLMFVLTFALG 337 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~ 337 (427)
.....++++-.+|+.+..+.. +-++| +.+.+..+.=.+...++.+...... . .-.+.+..++..++++...+..
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 566777888888888665431 11222 1222222222222222222111100 0 0012234444455555444433
Q ss_pred ccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014286 338 AGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 376 (427)
Q Consensus 338 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 376 (427)
. .....+..+..++++|-.+..+...+..+|-.+|..+
T Consensus 390 ~-s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 G-SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred H-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 3333367777788888888888888877777777765
No 283
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=93.23 E-value=7.7 Score=36.72 Aligned_cols=66 Identities=8% Similarity=-0.053 Sum_probs=47.5
Q ss_pred hhhhhhhccCCCC---chhHHHHHHHHHHHHHHHH-HHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 014286 73 PLESISLDLGFNG---NTLAEGLVVSMCLGGAFIG-STLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (427)
Q Consensus 73 ~~~~i~~~~~~~~---~~~~~g~~~s~~~l~~~~~-~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 138 (427)
++-.+++.+.++. ......++.+...+..++. .++.+++++|++|++++-.....+....+++++.
T Consensus 25 iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~v 94 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFV 94 (472)
T ss_pred HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHH
Confidence 4556667766532 2233478888877777666 8999999999999999988777776666665553
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.68 E-value=4.2 Score=38.68 Aligned_cols=109 Identities=11% Similarity=-0.028 Sum_probs=67.1
Q ss_pred HHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHh--hcCCCCCch---------------------hHHHHHHHHH
Q 014286 273 LLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS--SSYIPGSAS---------------------LYLSVGGMLM 329 (427)
Q Consensus 273 ~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------------------~~~~~~~~~~ 329 (427)
++...+..++++++++.++.-.........+.++++.. +....+... .|... ...+
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~s-lfYv 151 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFS-LFYV 151 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHH-HHHH
Confidence 34456678999999998877665555555554444432 111111110 01000 1111
Q ss_pred HHHHHhhc-ccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 330 FVLTFALG-AGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 382 (427)
Q Consensus 330 ~~~~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 382 (427)
..=.++.. ..-+.+.++.|+++.++..+-.++.....++|..+++.+...+.+
T Consensus 152 ~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 152 MAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111211 223567799999999999999999999999999999999888777
No 285
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.20 E-value=10 Score=35.71 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=34.2
Q ss_pred hhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 341 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 383 (427)
Q Consensus 341 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 383 (427)
...++-+.+..|..-|+.+.+.|++.|+|+---..+.=++.|.
T Consensus 425 ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 425 AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 3344777888889999999999999999987777776666653
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.31 E-value=9.1 Score=35.08 Aligned_cols=27 Identities=15% Similarity=0.029 Sum_probs=13.3
Q ss_pred HHHHHhhhccchhHHHHhHHHHHHhcC
Q 014286 232 STLFALQQLSGINAIFYFSSSVFKSAG 258 (427)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~g 258 (427)
.++........++....-.+++.+++.
T Consensus 23 ~~llGiG~LlpWN~fiTa~~y~~~~~~ 49 (406)
T KOG1479|consen 23 FLLLGIGTLLPWNMFITASDYYYYRFP 49 (406)
T ss_pred HHHHhcccccchHhhhccHHHHHhhcC
Confidence 333344444445555555566655543
No 287
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=91.26 E-value=0.06 Score=50.17 Aligned_cols=89 Identities=17% Similarity=0.063 Sum_probs=77.3
Q ss_pred hhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhhhccc
Q 014286 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGL 157 (427)
Q Consensus 78 ~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 157 (427)
.||.+- .+...|.....-..+-.+.-++.+++.+|+|+-+++.+++.+..+=.+..+..+|.|+.+..-++||+..+.
T Consensus 398 led~~~--~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 398 LEDLGG--IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHAL 475 (618)
T ss_pred HhhcCC--cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHH
Confidence 455553 233337777777888888899999999999999999999999999999999999999999999999999999
Q ss_pred cccceeecccC
Q 014286 158 GPTVAALYVTE 168 (427)
Q Consensus 158 ~~~~~~~~i~~ 168 (427)
.+.+..+|+..
T Consensus 476 iWaa~~sY~s~ 486 (618)
T KOG3762|consen 476 IWAAIISYASH 486 (618)
T ss_pred HHHHHHHHHHh
Confidence 99999998886
No 288
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.38 E-value=21 Score=32.61 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChhHHHHHHHHHHHH--HHHhHhhhhc-----ccCccchhhh-hhHHH
Q 014286 228 VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLL--GSVVAMVLMD-----KLGRKALLQW-SFFSM 299 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~g~l~d-----~~g~~~~~~~-~~~~~ 299 (427)
+.+..+++..+.. ...... -.|.+++..+.+-.-. ..+.+...+ --++...+.| |+|||+..++ +..+.
T Consensus 33 illLl~LYllQGi-P~GL~~-~iP~lL~ak~vSyt~~-a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ll 109 (510)
T KOG3574|consen 33 ILLLLFLYLLQGI-PLGLIG-AIPLLLQAKGVSYTSQ-AIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLL 109 (510)
T ss_pred HHHHHHHHHHcCC-chhHhh-hhHHHhcCCCcchhhh-hhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHHH
Confidence 3333444443332 344444 6777777666654411 111122222 2345666677 9998876443 34444
Q ss_pred HHHHHHHHH
Q 014286 300 AVSMAIQVA 308 (427)
Q Consensus 300 ~~~~~~~~~ 308 (427)
+..+..+..
T Consensus 110 G~~mllLs~ 118 (510)
T KOG3574|consen 110 GLFMLLLSY 118 (510)
T ss_pred HHHHHHHhh
Confidence 444444443
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.41 E-value=20 Score=33.77 Aligned_cols=29 Identities=14% Similarity=0.150 Sum_probs=13.8
Q ss_pred HHHHHHHHHhHhhhhcccCccchhhhhhH
Q 014286 269 GIANLLGSVVAMVLMDKLGRKALLQWSFF 297 (427)
Q Consensus 269 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 297 (427)
.+..++..+....+..|+..+.-+..+.+
T Consensus 55 ~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv 83 (437)
T TIGR00939 55 QLPSLLFNSLNLFLIFRIPVTVRLLGGLV 83 (437)
T ss_pred HHHHHHHHHHHHHHhhccCccchhHHHHH
Confidence 34444444555555666654333333433
No 290
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=85.81 E-value=14 Score=31.29 Aligned_cols=28 Identities=14% Similarity=0.057 Sum_probs=18.1
Q ss_pred hhhcccchhHHHHHhhHHHHHHHHHHHh
Q 014286 110 WIADGVGRRRAFQLCALPMIIGASISAT 137 (427)
Q Consensus 110 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 137 (427)
.++=||+|+.++..++....+-+++...
T Consensus 91 lmAmr~~R~~Vf~Ga~~AL~lMTiLS~~ 118 (294)
T KOG2881|consen 91 LMAMRYPRLTVFSGAMSALALMTILSVL 118 (294)
T ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHH
Confidence 4556888888887766555555555443
No 291
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=84.77 E-value=36 Score=32.18 Aligned_cols=112 Identities=11% Similarity=-0.070 Sum_probs=69.5
Q ss_pred HHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCC--CCCc-----------h-----------hHHHHHH
Q 014286 271 ANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI--PGSA-----------S-----------LYLSVGG 326 (427)
Q Consensus 271 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----------~-----------~~~~~~~ 326 (427)
+.++..++..++.+++.+.++...........++++++...... .+.+ . -|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 34556677888999999888877666666555555555432111 0000 0 0221111
Q ss_pred HHHHHHHHhhcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 327 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 382 (427)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 382 (427)
..+.-.-......-+.+..+.|....++..+-.++.+...+++..++..+..++..
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111111112233556688899999999999999999999999999988888765
No 292
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=83.79 E-value=33 Score=30.90 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 014286 359 MAVCMSVHWVINFFVGLLFLRLL 381 (427)
Q Consensus 359 ~g~~~~~~~~g~~~~~~~~g~l~ 381 (427)
.+.....-++|+..+..+..++.
T Consensus 141 ~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 141 GSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred hhhhhhhHhhhhhhHHHHHHHHH
Confidence 33344446677776666665543
No 293
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=83.66 E-value=20 Score=32.54 Aligned_cols=41 Identities=10% Similarity=0.155 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Q 014286 360 AVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 400 (427)
Q Consensus 360 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 400 (427)
+....+-..-..+.|.+.|.+.+..+.+..-..+++..++.
T Consensus 178 atir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vs 218 (503)
T KOG2601|consen 178 ATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVS 218 (503)
T ss_pred hhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHH
Confidence 33334444567899999999988777776555555555553
No 294
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=81.05 E-value=19 Score=34.15 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccCccchhhh-hhHHHHHHHHHHH
Q 014286 264 ANVFVGIANLLGSVVAMVLMDKLGRKALLQW-SFFSMAVSMAIQV 307 (427)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~~~~~~~~~~ 307 (427)
...++.+=.+=+.++=...++|+||||..++ ...+.++.++.+.
T Consensus 45 a~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~ 89 (544)
T PF13000_consen 45 ASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLS 89 (544)
T ss_pred eechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHH
Confidence 3344444333344444556778999876543 4444444444443
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.40 E-value=12 Score=26.62 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhccc-chhHHHHHhh
Q 014286 91 GLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCA 125 (427)
Q Consensus 91 g~~~s~~~l~~~~~~~~~G~l~dr~-Grr~~l~~~~ 125 (427)
+.-.+.=+++..+.....|++.||| |-++..++..
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4455666677777778889999996 5555444433
No 296
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.80 E-value=13 Score=26.46 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=29.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 014286 352 SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQ 387 (427)
Q Consensus 352 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 387 (427)
++.++.+.++-...-.+++++.....|++.|++--.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 456788888888888899999999999999987533
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=72.82 E-value=1 Score=40.02 Aligned_cols=112 Identities=13% Similarity=0.007 Sum_probs=1.7
Q ss_pred HHHHHHHHHHHHHHHhHhhhhccc-CccchhhhhhHHHHHHHHHHHHHhhcCC----C-CCchhHHHHHHHHHHHHHHhh
Q 014286 263 LANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAASSSYI----P-GSASLYLSVGGMLMFVLTFAL 336 (427)
Q Consensus 263 ~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~ 336 (427)
.....++++-.+|+.+.++..-+. ++|++... .+.=.+...++........ + .-.+.+..++.++++++..+.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~-s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWIL-SLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHH-HHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 356678888999999887743221 24443332 1111111111111100000 0 001122333334444444332
Q ss_pred cccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHH
Q 014286 337 GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 376 (427)
Q Consensus 337 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~ 376 (427)
. .+....+..+..++++|..+..+......+|-.+|..+
T Consensus 265 l-~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 L-STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---HHHH---------------------------------
T ss_pred h-hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 33444467777778888888777777777777666654
No 298
>PRK03612 spermidine synthase; Provisional
Probab=71.74 E-value=33 Score=33.15 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=24.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhHHhhhcc
Q 014286 85 GNTLAEGLVVSMCLGGAFIGSTLSGWIADG 114 (427)
Q Consensus 85 ~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr 114 (427)
.+..+.+.+.+++++|.++|+.+.+++.++
T Consensus 47 ~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 47 DSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 344455899999999999999999988744
No 299
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=66.95 E-value=65 Score=29.00 Aligned_cols=25 Identities=20% Similarity=0.209 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccCc
Q 014286 264 ANVFVGIANLLGSVVAMVLMDKLGR 288 (427)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~l~d~~g~ 288 (427)
.....++...+....-=++.++.++
T Consensus 172 l~l~~a~lya~~nV~~E~~v~~~~~ 196 (334)
T PF06027_consen 172 LALLGAILYAVSNVLEEKLVKKAPR 196 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCH
Confidence 3333444444555555556665544
No 300
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=64.54 E-value=53 Score=31.80 Aligned_cols=72 Identities=11% Similarity=0.126 Sum_probs=33.6
Q ss_pred hHhhhcccchhHHHHHHHHHHhhhccchhHHHHhHHHHHHhcCCChh----HHHHHHHHHHHHHHHhHhhhhcccCc
Q 014286 216 FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG----LANVFVGIANLLGSVVAMVLMDKLGR 288 (427)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~g~l~d~~g~ 288 (427)
..|++|.|.... +++.++....+..............-.....+.+ .....+.+.+.++..+++++...++.
T Consensus 251 hgDVFR~P~~~~-lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 251 HGDVFRPPKHPM-LLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred hHHHhcCcCCch-HHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 357788777543 3444444443333333222222211111111122 34445556666667777777666654
No 301
>COG4769 Predicted membrane protein [Function unknown]
Probab=60.95 E-value=12 Score=29.06 Aligned_cols=52 Identities=25% Similarity=0.135 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014286 96 MCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (427)
Q Consensus 96 ~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 153 (427)
++.+..++.+...-++..++|+|..-.+|.. ..-++.+|+.++++.+++.|-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 3455566677777788899999986555543 234678999999999998764
No 302
>PRK10263 DNA translocase FtsK; Provisional
Probab=54.94 E-value=1.1e+02 Score=32.97 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=9.4
Q ss_pred HHHHHHHHHhHhhhhcccC
Q 014286 269 GIANLLGSVVAMVLMDKLG 287 (427)
Q Consensus 269 ~~~~~~~~~~~g~l~d~~g 287 (427)
+.++.+|..+...+..-+|
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3445555555554444444
No 303
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=52.93 E-value=40 Score=26.15 Aligned_cols=28 Identities=4% Similarity=-0.079 Sum_probs=19.8
Q ss_pred hccCcCCccchhhHHHHHHHHHHHHHHH
Q 014286 345 LLPEIFPSRIRAKAMAVCMSVHWVINFF 372 (427)
Q Consensus 345 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~ 372 (427)
+++..-.++.-|+..|+-.+-.+++...
T Consensus 118 ilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4444446677899999988888876543
No 304
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=51.55 E-value=95 Score=22.83 Aligned_cols=48 Identities=10% Similarity=0.035 Sum_probs=30.2
Q ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHH
Q 014286 252 SVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 299 (427)
Q Consensus 252 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 299 (427)
.+....+.++........+...++.+++|..+-|..++|-...+....
T Consensus 27 ~ll~~~~~~e~~~~~~~~~i~~ls~~~GG~~a~~~~~~kG~l~G~~~G 74 (116)
T PF12670_consen 27 LLLYFTSLSESILPWLVVIIYILSVFIGGFYAGRKAGSKGWLHGLLVG 74 (116)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 334445677776666667777778888888777665555455544433
No 305
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.50 E-value=1.3e+02 Score=23.85 Aligned_cols=48 Identities=15% Similarity=0.004 Sum_probs=29.8
Q ss_pred HHhhhcccchhHHH-HHhhHHHHHHHHHHHh-hhhhHHHHHHHHHHhhhc
Q 014286 108 SGWIADGVGRRRAF-QLCALPMIIGASISAT-TRNLIGMLLGRFVVGTGM 155 (427)
Q Consensus 108 ~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~ 155 (427)
-.++..-+.++|.. -...+...+.++.+++ .+|...=+++-++|.++.
T Consensus 99 ~~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~lal 148 (175)
T KOG2887|consen 99 VSQLKHMFSPERLPATLSYLATMVLTLYVALWLKSKILTLLFCILQVLAL 148 (175)
T ss_pred HHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556665544 4455555666666665 567777777888887753
No 306
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=47.72 E-value=1.5e+02 Score=24.03 Aligned_cols=54 Identities=20% Similarity=0.087 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014286 97 CLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (427)
Q Consensus 97 ~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 153 (427)
..+...++.++.-.+..|.++|-++.+..++.++-..+++ ..|...+.-.+.|+
T Consensus 37 ~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G---~~~~~~~~~iv~gl 90 (186)
T PF09605_consen 37 PAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG---HGWPMLIVCIVGGL 90 (186)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHH
Confidence 3445556677777788888888887766666655544333 23444444444444
No 307
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=45.25 E-value=74 Score=25.69 Aligned_cols=23 Identities=26% Similarity=0.354 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhHHhhhcccch
Q 014286 95 SMCLGGAFIGSTLSGWIADGVGR 117 (427)
Q Consensus 95 s~~~l~~~~~~~~~G~l~dr~Gr 117 (427)
.-|.+++.+++.+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45788899999999999999885
No 308
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=44.38 E-value=92 Score=21.48 Aligned_cols=41 Identities=20% Similarity=0.162 Sum_probs=28.9
Q ss_pred HHHHHHhHHhhhcccch-------hHHHHHhhHHHHHHHHHHHhhhhh
Q 014286 101 AFIGSTLSGWIADGVGR-------RRAFQLCALPMIIGASISATTRNL 141 (427)
Q Consensus 101 ~~~~~~~~G~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 141 (427)
...+.+.++++.+|.-+ ++.+.++.++...+..+++..+|.
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 33445556666666544 788888888888888888887653
No 309
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=40.52 E-value=1.1e+02 Score=23.79 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhHHhhhcccchhH
Q 014286 95 SMCLGGAFIGSTLSGWIADGVGRRR 119 (427)
Q Consensus 95 s~~~l~~~~~~~~~G~l~dr~Grr~ 119 (427)
.-|.+|+.+.+.+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4578888899999999999988764
No 310
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=38.63 E-value=74 Score=22.86 Aligned_cols=47 Identities=30% Similarity=0.359 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHh
Q 014286 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (427)
Q Consensus 91 g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 137 (427)
|=+.+.|.-.+.+.++.|++..|+.-+-+-=.+|..+..++.....+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 67788888899999999999999988777667777666666655443
No 311
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=37.85 E-value=85 Score=24.32 Aligned_cols=50 Identities=8% Similarity=-0.007 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHH
Q 014286 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (427)
Q Consensus 95 s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 150 (427)
-.+.++..+.+...-.+..|..||+.=.++. ++.-+++||..|++++.++
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 4566777788888888888887766444333 3344567777777776665
No 312
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=37.69 E-value=1.8e+02 Score=25.20 Aligned_cols=65 Identities=12% Similarity=0.168 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcc-cchhHHHH----HhhHHHHHHHHHHHh-h----hhhHHHHHHHHHHhhhc
Q 014286 91 GLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQ----LCALPMIIGASISAT-T----RNLIGMLLGRFVVGTGM 155 (427)
Q Consensus 91 g~~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~ 155 (427)
....-++..|..+|....|..... +-||+-+. .+.+++.++.+.... . .++..+++.-++.|+..
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 344455667777777888888764 45555443 234444444444211 1 13555666667766643
No 313
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=36.18 E-value=3.3e+02 Score=24.69 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHH
Q 014286 267 FVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 301 (427)
Q Consensus 267 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 301 (427)
...+..+.++++.+.+.+++|-|+.+.++......
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~l 100 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYAL 100 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34455556666777999999999988776655443
No 314
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=35.48 E-value=53 Score=19.63 Aligned_cols=18 Identities=11% Similarity=0.047 Sum_probs=7.6
Q ss_pred HHHHHhccCCCCCCHHHHH
Q 014286 402 AFVKRNVVETKGKSLQEIE 420 (427)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~ 420 (427)
++.+.+.|++ +++.++..
T Consensus 25 i~~w~~~~~~-k~~~e~aa 42 (49)
T PF05545_consen 25 IVIWAYRPRN-KKRFEEAA 42 (49)
T ss_pred HHHHHHcccc-hhhHHHHH
Confidence 3444444433 34444444
No 315
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=34.93 E-value=40 Score=29.89 Aligned_cols=133 Identities=14% Similarity=0.051 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhh
Q 014286 264 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPS 343 (427)
Q Consensus 264 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (427)
+.+.-.+-..+..+....+.||+.-..-..+...+.+.++.+.++..+ .+..+.+..+..++. +.+-+..
T Consensus 67 VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s--------~~~sL~GV~~aSiss--GlGEiTF 136 (409)
T KOG3880|consen 67 VLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNS--------VPMSLLGVVFASISS--GLGEITF 136 (409)
T ss_pred hhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccc--------hhHHHhhhhhhhhcC--Ccceeeh
Confidence 334444555566677788888875433334444555555555544332 223444444443333 3444444
Q ss_pred hhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hccchhHHHHHHHHHHHHHHHHHhccC
Q 014286 344 LLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ--LGPQLLYSIFGTFCLMAVAFVKRNVVE 410 (427)
Q Consensus 344 ~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (427)
.-.+..+|+..-+.-.+ . -..++.+|..-...+.+. ...+...++...+-++.++..++.+++
T Consensus 137 L~lss~Y~~~~i~~WSS---G-TGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 137 LALSSRYPSIVIAGWSS---G-TGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred hhhhccCCCceeccccC---C-CCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 34444455432211111 1 111233333333333332 345666666666655555555555443
No 316
>PRK02237 hypothetical protein; Provisional
Probab=34.18 E-value=1.3e+02 Score=21.79 Aligned_cols=48 Identities=27% Similarity=0.286 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHHHHHHHhh
Q 014286 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (427)
Q Consensus 91 g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 138 (427)
|=+.+.|.-.+.+.++.|++..|+.-+-+-=.+|..+..++.....+.
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 677888989999999999999999876665566666666666554443
No 317
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=33.92 E-value=5.3e+02 Score=26.33 Aligned_cols=21 Identities=14% Similarity=0.431 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhHhhhhccc
Q 014286 266 VFVGIANLLGSVVAMVLMDKL 286 (427)
Q Consensus 266 ~~~~~~~~~~~~~~g~l~d~~ 286 (427)
....+.++++.++.-.+.||.
T Consensus 164 l~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 164 LLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 444455555566666666664
No 318
>PRK02237 hypothetical protein; Provisional
Probab=33.21 E-value=91 Score=22.49 Aligned_cols=45 Identities=18% Similarity=0.080 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHH
Q 014286 261 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 305 (427)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 305 (427)
.+-.+..++...++.+++.++..|+..+.+-=.++..++.++..+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHH
Confidence 346778888889999999999999987665555555555555443
No 319
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=33.01 E-value=3.2e+02 Score=23.55 Aligned_cols=45 Identities=18% Similarity=0.215 Sum_probs=23.8
Q ss_pred hhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 014286 341 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 385 (427)
Q Consensus 341 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 385 (427)
...+...+.+|+++|-++.=+--....+-..+.-....++.+.+.
T Consensus 36 iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l~~ 80 (254)
T COG0861 36 IVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTLTQ 80 (254)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 334466677787776665433333333344444555556665443
No 320
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=32.58 E-value=61 Score=23.35 Aligned_cols=37 Identities=11% Similarity=-0.137 Sum_probs=25.1
Q ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHHhccCCCCCC
Q 014286 379 RLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 415 (427)
Q Consensus 379 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (427)
.-.|..+|..++++...++++.+.+.+.+.|++.-++
T Consensus 52 ~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~~ 88 (105)
T PF10183_consen 52 EKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQT 88 (105)
T ss_pred CcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 4456677888887766666666666666778776544
No 321
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=32.30 E-value=74 Score=22.85 Aligned_cols=44 Identities=18% Similarity=0.030 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHHHH
Q 014286 262 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 305 (427)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 305 (427)
+-.+..++...++.+++.++..|+..+.+-=.++..++.++..+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 46778888889999999999999987766555555555555443
No 322
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=31.58 E-value=1.4e+02 Score=27.57 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=24.6
Q ss_pred hccCcCCccchhhHHHHHHHHHHHHHHHH
Q 014286 345 LLPEIFPSRIRAKAMAVCMSVHWVINFFV 373 (427)
Q Consensus 345 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~~ 373 (427)
...|..|.++|..+.|+.|.....-..+-
T Consensus 410 imQe~VpEseR~vv~gvqnsL~~~ldll~ 438 (503)
T KOG2601|consen 410 IMQETVPESERCVVFGVQNSLNSALDLLK 438 (503)
T ss_pred HHHHhcchhhhhhhHhHHHHHHHHHHHHH
Confidence 78899999999999999999987655443
No 323
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=31.56 E-value=12 Score=33.21 Aligned_cols=76 Identities=18% Similarity=0.186 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHhHHhhhcc-cchhHHHHHhh--HHHHHHHHHHH----------hhhhhHHHHHHHHHHhhhccccc
Q 014286 93 VVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCA--LPMIIGASISA----------TTRNLIGMLLGRFVVGTGMGLGP 159 (427)
Q Consensus 93 ~~s~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~--~~~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~g~~~ 159 (427)
+..+|.++-.+|..+.++.--+ -.+|++.+.+. +++....++|. +-+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567788888888777653211 13454444322 33333333332 23455667777888899888877
Q ss_pred cceeecccC
Q 014286 160 TVAALYVTE 168 (427)
Q Consensus 160 ~~~~~~i~~ 168 (427)
..+..+.++
T Consensus 267 tl~m~~~p~ 275 (309)
T PF01733_consen 267 TLAMMYAPK 275 (309)
T ss_dssp HHHH-----
T ss_pred hceeeeCCC
Confidence 777777765
No 324
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=31.42 E-value=3.3e+02 Score=25.01 Aligned_cols=14 Identities=7% Similarity=0.223 Sum_probs=6.4
Q ss_pred HHHHHhHhhhhccc
Q 014286 273 LLGSVVAMVLMDKL 286 (427)
Q Consensus 273 ~~~~~~~g~l~d~~ 286 (427)
++.....|++..|.
T Consensus 9 i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 9 IFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 33334445555544
No 325
>PRK12996 ulaA PTS system ascorbate-specific transporter subunit IIC; Reviewed
Probab=31.19 E-value=4.6e+02 Score=24.84 Aligned_cols=18 Identities=11% Similarity=0.126 Sum_probs=12.0
Q ss_pred cccccchhhhhhhccCCC
Q 014286 67 LGVVNEPLESISLDLGFN 84 (427)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~ 84 (427)
.+...|....+++.+|++
T Consensus 61 v~sl~p~~~~f~~~f~i~ 78 (463)
T PRK12996 61 VGSLNPLGGMFEHAFNIQ 78 (463)
T ss_pred HHHHHHHHHHHHHHcCCc
Confidence 345566677778878754
No 326
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=30.08 E-value=1.4e+02 Score=18.32 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhHHhhhcc-cchhHHHHHhhHHHHH
Q 014286 96 MCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMII 130 (427)
Q Consensus 96 ~~~l~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~ 130 (427)
.......+.....|+..|+ +|.++...+..++.++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3444455556667777775 6776655444444443
No 327
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=29.79 E-value=5.2e+02 Score=24.96 Aligned_cols=80 Identities=11% Similarity=0.164 Sum_probs=40.6
Q ss_pred chhHhhhcccchhHHHHHHHHHHhhhccchhHHH-HhHHHHHHhcCCChh------HHHHHHHHHHHHHHHhHhhhhccc
Q 014286 214 VKFEELLYGRHFRVVFIGSTLFALQQLSGINAIF-YFSSSVFKSAGLSSG------LANVFVGIANLLGSVVAMVLMDKL 286 (427)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~g~l~d~~ 286 (427)
.+++.++++|..+...+....+... .+.+- .|-....+.+.-+.. ......++..++..++++.+.+|+
T Consensus 271 es~k~l~kS~yL~~Ia~lvi~Ygi~----inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 271 ESFKLLLKSKYLLCIALLVIAYGIS----INLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556667676665544444333332 22211 222222232322222 234445556666667889999999
Q ss_pred CccchhhhhhH
Q 014286 287 GRKALLQWSFF 297 (427)
Q Consensus 287 g~~~~~~~~~~ 297 (427)
|-+....+.-+
T Consensus 347 GW~~~AlitPi 357 (491)
T PF03219_consen 347 GWRTAALITPI 357 (491)
T ss_pred hHHHHHHHhHH
Confidence 87765555433
No 328
>COG2119 Predicted membrane protein [Function unknown]
Probab=27.37 E-value=1.9e+02 Score=23.37 Aligned_cols=37 Identities=14% Similarity=0.125 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhHhhhhcccCccchhhhhhHHHHHHH
Q 014286 267 FVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 303 (427)
Q Consensus 267 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 303 (427)
...++..++...+.++++|+..|.+...+.++..+..
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 3445666777788899999998888777665554433
No 329
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=26.96 E-value=21 Score=30.52 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=36.4
Q ss_pred HhhhhhccccccccchhhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhh---------hcccchhHHH
Q 014286 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWI---------ADGVGRRRAF 121 (427)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l---------~dr~Grr~~l 121 (427)
.+.+.+....+.....+-.+.++.++++++. ..+.-+....-++..++.|.. .||+|||+..
T Consensus 24 vGHmlNDitAScWFTYlllfltqiglsp~~~--AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQIGLSPSSR--AMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHhcCCcchh--HHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 3444443333333333444556667766655 455555666667777777644 4699999865
No 330
>PRK11111 hypothetical protein; Provisional
Probab=26.55 E-value=3.8e+02 Score=22.37 Aligned_cols=68 Identities=18% Similarity=0.130 Sum_probs=33.4
Q ss_pred hcccchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHH
Q 014286 336 LGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQL-LYSIFGTFCLMAVAFV 404 (427)
Q Consensus 336 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~-~~~~~~~~~~~~~~~~ 404 (427)
.+..|+..++..+.-+ ++|-+..--......+.-.+..+.+.++.+.+|... .|-+.+++.+....+-
T Consensus 24 ig~ipiflslt~~~s~-~~r~~ia~~a~l~a~~ill~f~~~G~~iL~~fGIsl~afrIaGGiiL~~ial~ 92 (214)
T PRK11111 24 VGILPVFISMTSHQTA-AERNKTNLTANLSVAIILLISLFLGDFILNLFGISIDSFRIAGGILVVTIAMS 92 (214)
T ss_pred chhHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 3445666655555544 444333222222233334445555667777788543 4555555554443333
No 331
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=25.43 E-value=3.9e+02 Score=22.07 Aligned_cols=64 Identities=17% Similarity=0.259 Sum_probs=32.7
Q ss_pred cchhhhhccCcCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHH
Q 014286 339 GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQL-LYSIFGTFCLMAVAF 403 (427)
Q Consensus 339 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~-~~~~~~~~~~~~~~~ 403 (427)
.|....+..+. ++++|-+..--......+...+....+..+.+.+|... .|-+.+++.+....+
T Consensus 21 ip~f~~lt~~~-~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~ 85 (203)
T PF01914_consen 21 IPIFLSLTKGM-SPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIAL 85 (203)
T ss_pred HHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 34444355554 44544444433344444444555555666777778543 455555555444333
No 332
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=24.87 E-value=1.6e+02 Score=17.55 Aligned_cols=14 Identities=21% Similarity=0.121 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHhc
Q 014286 372 FVGLLFLRLLEQLG 385 (427)
Q Consensus 372 ~~~~~~g~l~~~~g 385 (427)
+|.++.+++.+..+
T Consensus 6 iGa~vGg~l~~~lg 19 (48)
T PF04226_consen 6 IGAFVGGWLFGLLG 19 (48)
T ss_pred HHHHHHHHHHHHhc
Confidence 34444444444444
No 333
>PF11166 DUF2951: Protein of unknown function (DUF2951); InterPro: IPR021337 This family of proteins has no known function. It has a highly conserved sequence.
Probab=24.70 E-value=1.4e+02 Score=20.87 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=8.9
Q ss_pred HHHHHhhHHHHHHHHHHHh
Q 014286 119 RAFQLCALPMIIGASISAT 137 (427)
Q Consensus 119 ~~l~~~~~~~~~~~~~~~~ 137 (427)
+..+.|++...+|++..|+
T Consensus 73 KmwilGlvgTi~gsliia~ 91 (98)
T PF11166_consen 73 KMWILGLVGTIFGSLIIAL 91 (98)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444455555555444443
No 334
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=23.23 E-value=1.9e+02 Score=26.36 Aligned_cols=89 Identities=21% Similarity=0.216 Sum_probs=52.9
Q ss_pred hhhhhhccCCCCchhHHHHHHHHHHHHHHHHHHhHHhhhcccchhHHHHHhhHHHHHH-----HHHHHhh----hhhHHH
Q 014286 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG-----ASISATT----RNLIGM 144 (427)
Q Consensus 74 ~~~i~~~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~-----~~~~~~~----~~~~~l 144 (427)
+-.++..+. ...-.|.+.+.+.|..+..+|+...-++.|.--.-+.+..-+++..++ .+-..|+ ++-+.+
T Consensus 30 l~tLatyLl-G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vl 108 (508)
T COG4262 30 LGTLATYLL-GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVL 108 (508)
T ss_pred HHHHHHHhc-CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHH
Confidence 344444443 234455589999999999999999988888644332222222222111 1111333 455677
Q ss_pred HHHHHHHhhhcccccccee
Q 014286 145 LLGRFVVGTGMGLGPTVAA 163 (427)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~ 163 (427)
.+.-++.|.-.|...|..+
T Consensus 109 y~lt~vIG~LVG~EiPL~m 127 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLM 127 (508)
T ss_pred HHHHHHHHHHHhcchHHHH
Confidence 7778888887777766554
No 335
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=23.09 E-value=2.2e+02 Score=26.08 Aligned_cols=94 Identities=15% Similarity=0.049 Sum_probs=55.1
Q ss_pred hhhhcccCccchhhhhhHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhhcccchhhhhccCcCCccchhhHH
Q 014286 280 MVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAM 359 (427)
Q Consensus 280 g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 359 (427)
-.+.|...-|++++.-.+.......++.+..... ..-+.=..+ +.....--..++++-+..+++++-++.
T Consensus 63 FlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~--------~mQvlE~Fy--G~~tAaEIAYysYIYs~Vd~~~Yqrvt 132 (433)
T KOG3810|consen 63 FLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVK--------AMQVLEFFY--GPATAAEIAYYSYIYSKVDPEMYKRVT 132 (433)
T ss_pred HHHhhhhhcceeeeeeccchhHHHHHHHhcCCch--------heeeehhhc--ChHHHHHHhhhheeeeecCHHHHHHHH
Confidence 3567877777777665555555555544433221 111111111 111111234455777888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 014286 360 AVCMSVHWVINFFVGLLFLRLLEQ 383 (427)
Q Consensus 360 g~~~~~~~~g~~~~~~~~g~l~~~ 383 (427)
|......-.|...|..++-.+.+.
T Consensus 133 ~y~RaA~L~g~~~g~vlaQlLvs~ 156 (433)
T KOG3810|consen 133 GYCRAAFLVGKFVGSVLAQLLVSL 156 (433)
T ss_pred HHhHHHHHHHhHHHhHHHHHHhhh
Confidence 999888888888877777666654
No 336
>TIGR00210 gltS sodium--glutamate symport carrier (gltS).
Probab=22.85 E-value=78 Score=29.37 Aligned_cols=22 Identities=9% Similarity=-0.232 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhHhhhhcccCc
Q 014286 267 FVGIANLLGSVVAMVLMDKLGR 288 (427)
Q Consensus 267 ~~~~~~~~~~~~~g~l~d~~g~ 288 (427)
+..+..+++..+...+.||.+.
T Consensus 246 P~fv~am~~giiirni~~~~~~ 267 (398)
T TIGR00210 246 PTFVWCLFVGVILRNPLSFKKF 267 (398)
T ss_pred CchHHHHHHHHHHHHHHHHhCc
Confidence 3444455555556666666554
No 337
>PTZ00370 STEVOR; Provisional
Probab=22.79 E-value=1.5e+02 Score=25.70 Aligned_cols=15 Identities=7% Similarity=-0.026 Sum_probs=7.0
Q ss_pred HHHHHhccCCCCCCH
Q 014286 402 AFVKRNVVETKGKSL 416 (427)
Q Consensus 402 ~~~~~~~~~~~~~~~ 416 (427)
++++.|+.++|+++.
T Consensus 272 iilYiwlyrrRK~sw 286 (296)
T PTZ00370 272 IILYIWLYRRRKNSW 286 (296)
T ss_pred HHHHHHHHHhhcchh
Confidence 344445555555443
No 338
>KOG4473 consensus Uncharacterized membrane protein [Function unknown]
Probab=22.20 E-value=2.8e+02 Score=23.01 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=24.4
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 014286 351 PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLY 390 (427)
Q Consensus 351 p~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 390 (427)
|.+.|..-.++.....+.-+.+.|++...++....++...
T Consensus 158 p~~~~p~qaA~asa~afslGg~vPLl~~~fi~~~~~~~v~ 197 (247)
T KOG4473|consen 158 PAENRPLQAAAASALAFSLGGIVPLLPAAFVKDYKVRIVV 197 (247)
T ss_pred CCCCchHHHHHHHHHHHHhccHHhhhHHHhhhhhhhhhhh
Confidence 4555666666666666666666677666666665555433
No 339
>PRK10692 hypothetical protein; Provisional
Probab=22.13 E-value=2.1e+02 Score=19.68 Aligned_cols=43 Identities=19% Similarity=0.101 Sum_probs=26.1
Q ss_pred hhHHHHHhhHHHHHHHHHHHhh-----------hhhHHHHHHHHHHhhhccccc
Q 014286 117 RRRAFQLCALPMIIGASISATT-----------RNLIGMLLGRFVVGTGMGLGP 159 (427)
Q Consensus 117 rr~~l~~~~~~~~~~~~~~~~~-----------~~~~~l~~~r~l~G~~~g~~~ 159 (427)
||...++|-++++++.+.+..+ -++++++.--.+.|++.|...
T Consensus 3 Rk~a~~~GN~lMglGmv~Mv~gigysi~~~i~~L~Lp~~~~~gal~~IFiGAll 56 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQLNLPQFFAHGALLSIFVGALL 56 (92)
T ss_pred chhhHHHhhHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHhhHHHHHHHHHHH
Confidence 6667777777777666554321 145566666667777666443
No 340
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=20.46 E-value=3.1e+02 Score=19.09 Aligned_cols=15 Identities=13% Similarity=0.339 Sum_probs=8.2
Q ss_pred chhHHHHhHHHHHHh
Q 014286 242 GINAIFYFSSSVFKS 256 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~ 256 (427)
.+.....+.|..+..
T Consensus 31 ~~~ll~a~~p~~m~~ 45 (91)
T PF04341_consen 31 GFVLLSAFAPELMAT 45 (91)
T ss_pred HHHHHHHHCHHHHcC
Confidence 445555566666543
No 341
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=20.09 E-value=4.5e+02 Score=20.89 Aligned_cols=22 Identities=14% Similarity=-0.019 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhhh
Q 014286 91 GLVVSMCLGGAFIGSTLSGWIA 112 (427)
Q Consensus 91 g~~~s~~~l~~~~~~~~~G~l~ 112 (427)
-|......+..+..+++.|..+
T Consensus 64 ~W~~~~~l~~~~~~gll~G~~S 85 (168)
T PF07099_consen 64 IWFDFLLLLSFALFGLLLGFLS 85 (168)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666666666666666544
Done!