Query 014287
Match_columns 427
No_of_seqs 206 out of 1073
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 08:52:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014287.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014287hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gwd_A Glutamate cysteine liga 100.0 1.9E-80 6.4E-85 645.0 30.6 377 40-416 1-377 (449)
2 1r8g_A Hypothetical protein YB 100.0 2.9E-53 9.9E-58 431.1 19.9 283 68-416 5-293 (372)
3 3ln6_A Glutathione biosynthesi 99.9 1.4E-27 4.9E-32 261.1 15.7 227 72-367 17-288 (750)
4 1va6_A Glutamate--cysteine lig 99.9 1.2E-25 4.1E-30 234.6 15.2 267 61-382 9-354 (518)
5 3ln7_A Glutathione biosynthesi 99.9 4.5E-24 1.5E-28 233.2 14.1 225 73-367 18-293 (757)
6 3nzt_A Glutamate--cysteine lig 99.8 9.3E-21 3.2E-25 197.3 15.5 207 63-302 19-274 (525)
7 3ig5_A Glutamate-cysteine liga 99.7 4E-16 1.4E-20 163.9 18.4 207 57-278 27-325 (692)
8 3o6x_A Glutamine synthetase; t 97.2 0.0028 9.4E-08 68.2 13.2 48 130-181 283-331 (729)
9 3ng0_A Glutamine synthetase; G 97.1 0.0074 2.5E-07 62.6 14.7 91 128-250 210-316 (473)
10 4acf_A Glutamine synthetase 1; 97.1 0.012 4.2E-07 61.2 16.2 91 129-251 223-330 (486)
11 3fky_A Glutamine synthetase; b 97.0 0.011 3.7E-07 59.4 14.3 45 129-174 189-234 (370)
12 1f52_A Glutamine synthetase; A 96.9 0.0038 1.3E-07 64.6 11.2 90 129-250 208-313 (468)
13 2ojw_A Glutamine synthetase; a 96.9 0.0091 3.1E-07 60.3 13.5 45 129-174 211-256 (384)
14 2d3a_A Glutamine synthetase; l 96.9 0.0036 1.2E-07 62.6 10.1 49 129-181 188-237 (356)
15 4hpp_A Probable glutamine synt 96.8 0.0073 2.5E-07 62.1 11.8 154 49-253 103-285 (443)
16 3qaj_A Glutamine synthetase; A 96.4 0.033 1.1E-06 57.2 13.5 107 49-174 103-230 (444)
17 2j9i_A Glutamate-ammonia ligas 88.2 0.12 3.9E-06 52.8 0.7 112 49-174 94-216 (421)
18 2bp3_S Platelet glycoprotein I 34.6 8.7 0.0003 22.6 0.1 14 345-358 9-22 (26)
19 4b0t_A PUP--protein ligase; pu 26.2 58 0.002 33.4 4.6 72 74-153 11-84 (493)
No 1
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=100.00 E-value=1.9e-80 Score=645.03 Aligned_cols=377 Identities=88% Similarity=1.452 Sum_probs=350.7
Q ss_pred ecCCCCCCcccCCCCCCHHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCcc
Q 014287 40 AASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDY 119 (427)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~ 119 (427)
|+|||+++++..|++.++++|++||++|||+++.++||+|+|+++||.+|++++++..+.++|+.+.+.+||++..++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iGvE~E~~lVd~~~~~~~~~~~~~~lL~~l~~~~g~~~~~~~~~ 80 (449)
T 2gwd_A 1 AASPPTEEAVVATEPLTREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTLRPMKYDQIAELLNSIAERFEWEKVMEGDK 80 (449)
T ss_dssp -------------CCCCHHHHHHHHHTTCCCGGGCCEEEEEEEEEEETTTCCBCCHHHHHHHHHHHHHHHTCEEEEETTE
T ss_pred CCCCCCcccccCCCccCHHHHHHHHHhcCCCCCCCeEEEEeEEEeeecCCCCCCChHHHHHHHHHHHHhhccCccccccc
Confidence 68999999999999999999999999999999999999999999999988999997666899999888888888889999
Q ss_pred ccccccCCceeeecCCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHH
Q 014287 120 IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMR 199 (427)
Q Consensus 120 ~igl~~e~~~itlEpg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~ 199 (427)
+|++++++..|++||++|||++|+||.++.+++++|...++.++++++++|+.|+++|+||+.++.+.+++|++||+.|.
T Consensus 81 ~~~l~~~~~~i~~E~~~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~ 160 (449)
T 2gwd_A 81 IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTMPKGRYDIMR 160 (449)
T ss_dssp EEEEEETTEEEEECTTCCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCCSCHHHHHHH
T ss_pred cccccCCCceEEecCCceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCceeeccCCCCCCccccCCCCchHHHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred HhcccccchhhhhhcccceeEeecCCCCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCC
Q 014287 200 NYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAG 279 (427)
Q Consensus 200 ~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg 279 (427)
++|+..|..|++||.++||+||||++++++++++++|.+++++|+++|||||||||+|++|||+|+|+.+|+++|++|+|
T Consensus 161 ~~~~~~g~~g~~mm~~~~g~qVhl~~~~~~~~~~~~~~~~~~~P~llALsAnSPf~~G~~tg~~S~R~~~w~~~~~~r~G 240 (449)
T 2gwd_A 161 NYMPKVGSLGLDMMLRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFLSMRSHIWTDTDKDRTG 240 (449)
T ss_dssp HHGGGTCSSHHHHHHHBCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHCCBCEETTEECSCSBHHHHHTTSSCGGGCS
T ss_pred HHHHHhchhHHHHhhcceeeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccccCcCCCcchHHHHHhhCCCCcCC
Confidence 99987788899999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred CCCCCCCCchhHHHHHHHHhcCceeeEeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCcccceEe
Q 014287 280 MLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLE 359 (427)
Q Consensus 280 ~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~~~IE 359 (427)
.+|+.|+++++|++|+++++++|||||+++|.++++.+.+|+||+.++++.+.|+.|+++||.+|+||+||+||||+|||
T Consensus 241 ~~p~~f~~~~~~e~yv~~l~~~~~~~v~~~g~~~~~~~~~f~~~l~~~l~~~~~~~p~~~d~~~~~st~~~~vRpk~~iE 320 (449)
T 2gwd_A 241 MLPFVFDDSFGFEQYVDYALDVPMYFAYRNGKYVDCTGMTFRQFLAGKLPCLPGELPTYNDWENHLTTIFPEVRLKRYME 320 (449)
T ss_dssp CCGGGGSTTCSHHHHHHHHHHSCEEEEEETTEEEEEEEECHHHHHTTCCTTSTTCCCCHHHHHHHHTTCCCSEEESSSEE
T ss_pred CCCcccCCccCHHHHHHHHHcCCceEeecCCccccCCcchHHHhhhcccccccCCCCCHHHHHhhhcccCcccCcCCceE
Confidence 88999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred eecCCCCchhhhhHHHHHHHHhccChhhhhhHHHhhcCCcHHHHHHHHHHHHHhcCC
Q 014287 360 MRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVKERVNS 416 (427)
Q Consensus 360 iR~~Da~P~~~~~A~~Al~~GLl~~~~~l~~~~~~~~~~~~~~r~~L~~~~~~~~~~ 416 (427)
+|++|+||+.+++|++||+.||+++..+++.+++..+.|..+++..++.++.+.|++
T Consensus 321 ~R~~D~~p~~~~~a~aAl~~gL~~~~~~~~~~~~~~~~~~~~~~~~~~~~AaR~Gl~ 377 (449)
T 2gwd_A 321 MRGADGGPWRRLCALPAFWVGLLYDEDVLQSVLDLTADWTPAEREMLRNKVPVTGLK 377 (449)
T ss_dssp EEEEECCCHHHHHHHHHHHHHHHSSHHHHHHHHHHTTTCCHHHHHHHHHHHHHHGGG
T ss_pred eecCCCCCcHHHHHHHHHHHHHHhhHHhhhhhHhhcCCcCHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999899999999999999999999999999997
No 2
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=100.00 E-value=2.9e-53 Score=431.10 Aligned_cols=283 Identities=14% Similarity=0.080 Sum_probs=231.9
Q ss_pred CC-CCCCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeecC-CceeEeecCcc
Q 014287 68 CK-PKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEP-GGQFELSGAPL 145 (427)
Q Consensus 68 ~~-~~~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlEp-g~qiElst~p~ 145 (427)
|| +++.+++|||+|+++||++|+++++++ .++|+.+.+.+ .+..|+.|+ ++|||++|+||
T Consensus 5 ~F~~~~~~~~GiE~E~~~Vd~~~g~~~~~~--~~~l~~~~~~~----------------~~~~it~E~~~~qlEl~t~p~ 66 (372)
T 1r8g_A 5 DFHVSEPFTLGIELEMQVVNPPGYDLSQDS--SMLIDAVKNKI----------------TAGEVKHDITESMLELATDVC 66 (372)
T ss_dssp CCCCCCTTCEEEEEEEEEEETTTTEECSCC--HHHHTTTSSSC----------------SSSEEEECSSSSEEEEECCSB
T ss_pred CCCCCCCCceEEEEEEeeECCCCCCcCccH--HHHHHhchhcc----------------cCCcccchhhccEEEecCCCC
Confidence 55 478899999999999999889999987 67776543321 135799997 79999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCC
Q 014287 146 ETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDF 225 (427)
Q Consensus 146 ~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~ 225 (427)
.++.+++++|.+.++.+.++++++|+.|+++|+||+..+.+.++++|+||+.|.++|+ ..++.|| +||+||||++
T Consensus 67 ~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g---~~~~~~~--i~g~hvhv~~ 141 (372)
T 1r8g_A 67 RDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFG---YLIQQAT--VFGQHVHVGC 141 (372)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCG---GGGCSCC--BCEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHH---HHHHhhc--eeeEEEEeCC
Confidence 9999999999999999999999999999999999998888889999999999999884 4567777 9999999999
Q ss_pred CCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceee
Q 014287 226 SSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYF 305 (427)
Q Consensus 226 ~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~ 305 (427)
++++++++++|.++.++|+++|||||||||+|++|||+|+|+.+|++++ |+|. |+.|.++++|++|++++++++++
T Consensus 142 ~~~~~~~~~~~~~~~~~p~l~aL~anSPf~~G~~tg~~s~R~~~~~~~p--~~g~-~~~f~~~~~y~~~~~~~l~~g~~- 217 (372)
T 1r8g_A 142 ASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFP--DNGP-MPWVSNWQQFEALFRCLSYTTMI- 217 (372)
T ss_dssp SSHHHHHHHHHHHHTTHHHHHHHHCCBCEETTEECSCSBCGGGGGTTST--TCSS-CCCCSSHHHHHHHHHHHTTSSSC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCcHHHHHHHHHcCC--ccCC-CcccCCHHHHHHHHHHHHHCCCc-
Confidence 9999999999999999999999999999999999999999999999997 7775 66899999999999999887754
Q ss_pred EeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCcccc---eEeeecCCCCch-hhhhHHHHHHHHh
Q 014287 306 VYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKR---YLEMRGADGGPW-RRLCALPAFWVGL 381 (427)
Q Consensus 306 v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~~---~IEiR~~Da~P~-~~~~A~~Al~~GL 381 (427)
.|.+++|++||||. |||+|++|++|. .+.+|++||+.||
T Consensus 218 -------------------------------------~~~~~~y~~vRpk~~~~~IE~R~~D~~p~~~~~~a~aa~~~~l 260 (372)
T 1r8g_A 218 -------------------------------------DSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQAT 260 (372)
T ss_dssp -------------------------------------SSGGGCCCSEEEETTTTEEEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred -------------------------------------CcCCeeccccccCCCCCceEEeccCCCCCHHHHHHHHHHHHHH
Confidence 36899999999995 999999999995 8999999999999
Q ss_pred ccChhhhhhHHHhhcCCcHHHHHHHHHHHHHhcCC
Q 014287 382 LYDEDSLQNVLDMTADWTTGERQMLRNKVKERVNS 416 (427)
Q Consensus 382 l~~~~~l~~~~~~~~~~~~~~r~~L~~~~~~~~~~ 416 (427)
+++. +.........|........+.++.+.|++
T Consensus 261 ~~~~--~~~~~~~~~~~~~~~~~~n~~~aar~Gl~ 293 (372)
T 1r8g_A 261 AHWL--LTERPFKHQEKDYLLYKFNRFQACRYGLE 293 (372)
T ss_dssp HHHH--HHHCCCCCCGGGGTTHHHHHHHHHHHGGG
T ss_pred HHHH--HHhCCCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 9975 33333344456666667777777777775
No 3
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=99.95 E-value=1.4e-27 Score=261.06 Aligned_cols=227 Identities=16% Similarity=0.148 Sum_probs=177.1
Q ss_pred CCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHH
Q 014287 72 EKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQ 150 (427)
Q Consensus 72 ~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~ 150 (427)
...++|||.|+++||+++|..++... .++|+ -......|+.| ..+|||+.|+||.++.+
T Consensus 17 ~~~~~GiE~E~lrvd~~~g~la~~~~-p~~lg-------------------~~~~~~~i~~d~~es~lE~~Tpv~~~~~~ 76 (750)
T 3ln6_A 17 LQATFGLERESLRIHQPTQRVAQTPH-PKTLG-------------------SRNYHPYIQTDYSEPQLELITPIAKDSQE 76 (750)
T ss_dssp TCEEEEEEEEEEEEETTTTEECCCCC-CSSSC-------------------CTTTCSSEEESSBSSEEEEECCCBSSHHH
T ss_pred ccCCceEEEEeeEecCCcCCcCCCcc-hHHhc-------------------CcccCCCccchhhhhheeeeCcCCCCHHH
Confidence 36799999999999997776544310 11121 11112457788 57999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCC-----CchHHHH-HHHhcccccchhhhhhcccceeEeecC
Q 014287 151 TCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVM-----PKGRYEI-MRNYMPKVGSLGLDMMFRTCTVQVNLD 224 (427)
Q Consensus 151 l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~-----p~~RY~~-m~~~~~~~g~~g~~~m~~t~s~qVhld 224 (427)
+.++|....+.+.+.++ .|..|+++|++|..+..++++. +++||+. |.+.|+ ++.++ +||+|||++
T Consensus 77 ~~~~L~~l~~~~~~~~~-~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~~ryg-----~~~q~--i~G~Hvn~~ 148 (750)
T 3ln6_A 77 AIRFLKAISDVAGRSIN-HDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLEKTYG-----KLIQS--ISGIHYNLG 148 (750)
T ss_dssp HHHHHHHHHHHHHHHSC-TTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHHHHHC-----TGGGG--CCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhc-CCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHHHHhC-----hhhce--eeeEEEEec
Confidence 99999999999988876 6889999999998765566666 6999997 777763 34555 999999999
Q ss_pred CCCHHH-------------------HHHHHHHHhhhhHHHHHHhhCCCCC-----CCCCCCC-ccccHHHHccCCCCCCC
Q 014287 225 FSSEAD-------------------MIRKFRAGLALQPIATALFANSPFT-----EGKPNGY-LSMRSHIWTDTDNNRAG 279 (427)
Q Consensus 225 ~~~~~~-------------------~v~~~n~~~~l~P~llALsANSPf~-----~G~~tg~-~S~R~~iw~~~~~~Rtg 279 (427)
++++.. .....|..+.+.|+|++||+||||| .|++|++ .|+|+..|..++ ++
T Consensus 149 ~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~~r~~w~l~~L~gaSP~~~~~f~~g~~~~~~~S~R~s~~g~~~--~~- 225 (750)
T 3ln6_A 149 LGQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPVAEEDFLDQKLNNPVRSLRNSHLGYVN--HK- 225 (750)
T ss_dssp ECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSCSSCTTTCCCSBSTTSSSSSCC--CT-
T ss_pred CChHHHHHHhhccccchHHHHhhhHHHHHHHHHHhHHHHHHHHhhCCccccccccCCCCCCceeeeeccccCCCC--CC-
Confidence 997541 2345777888999999999999999 6788884 799999999998 44
Q ss_pred CCCCCCCCchhHHHHHHHHhcCceeeEeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCcccc---
Q 014287 280 MLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKR--- 356 (427)
Q Consensus 280 ~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~~--- 356 (427)
++|..|.|+..|.++++.++++.++. ..+.+|++||||+
T Consensus 226 ~~~~~~~s~~~Y~~~l~~~v~~g~l~--------------------------------------~~~e~y~~iRpk~~~p 267 (750)
T 3ln6_A 226 DIRISYTSLKDYVNDLENAVKSGQLI--------------------------------------AEKEFYSPVRLRGSKA 267 (750)
T ss_dssp TCCCCCSSHHHHHHHHHHCCTTTC----------------------------------------CGGGCCCSEEEESCSS
T ss_pred CCCCCcCCHHHHHHHHHHHHHCCCcc--------------------------------------cCCceeEeecCCCCCC
Confidence 46779999888888887777665542 1244688899884
Q ss_pred ----------eEeeecCCCCc
Q 014287 357 ----------YLEMRGADGGP 367 (427)
Q Consensus 357 ----------~IEiR~~Da~P 367 (427)
|||+|++|.+|
T Consensus 268 ~~~l~~~Gi~yiE~R~~D~~p 288 (750)
T 3ln6_A 268 CRNYLEKGITYLEFRTFDLNP 288 (750)
T ss_dssp TTTTTTTCCCEEEECCCCCCT
T ss_pred chhHhhCCCCeEEEEeecCCC
Confidence 89999999999
No 4
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=99.93 E-value=1.2e-25 Score=234.65 Aligned_cols=267 Identities=17% Similarity=0.174 Sum_probs=186.2
Q ss_pred HHHHHcCCCCCCCCeeEEEeccccccCCCCCCC--ChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCce
Q 014287 61 VGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPM--KYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQ 137 (427)
Q Consensus 61 ~~~~~~~~~~~~~~~iGvE~E~~lvd~~t~~~~--~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~q 137 (427)
..++++.-..=...++|||.|.+.||++ |..+ |.. ..|. . ......|+-| ..+|
T Consensus 9 l~~l~~~~~~l~~~~~GIE~E~lrVd~~-G~La~tphP---~~lg---s----------------~lt~~~IttDfsEsq 65 (518)
T 1va6_A 9 LAWLEKHPQALKGIQRGLERETLRVNAD-GTLATTGHP---EALG---S----------------ALTHKWITTDFAEAL 65 (518)
T ss_dssp HHHHHHSGGGGTTCEEEEEEEEEEECTT-SCBCCSCSC---GGGC---C----------------TTTCSSEEECSBTTE
T ss_pred HHHhhcCHHHHhcCCcceEeeeeEECCC-CCCCCCCCh---HHHh---c----------------cccCCCcCCCcchhh
Confidence 4455554332345799999999999986 7642 221 1111 1 1112457788 5699
Q ss_pred eEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-CCCC---------CCchHHH-HHHHhccccc
Q 014287 138 FELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPV---------MPKGRYE-IMRNYMPKVG 206 (427)
Q Consensus 138 iElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-~~~~---------~p~~RY~-~m~~~~~~~g 206 (427)
||+.|+||.++.++.++|....+.+...+ .|..|++.+++|..+.. .+++ ..|.||+ .|.++++
T Consensus 66 lE~iTpv~~s~~eal~~L~~l~~~v~~~l--~~e~Lwp~SmP~~l~~~~~IpiA~yg~s~~g~~k~~Yr~~L~~rYG--- 140 (518)
T 1va6_A 66 LEFITPVDGDIEHMLTFMRDLHRYTARNM--GDERMWPLSMPSYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYG--- 140 (518)
T ss_dssp EEEECCCBSCHHHHHHHHHHHHHHHHTSS--TTCEECCSSSCSSCCTTCCCCBCCCCSSHHHHHHHHHHHHHHHHHC---
T ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHHHc--CCCeEeecCCCCCCCCCCCCccccccccccCccchHHHHHHHHHhC---
Confidence 99999999999999999999999999888 49999998888886522 3344 3679999 5887763
Q ss_pred chhhhhhcccceeEeecCCCCH-------------------HHHHHHHHHHhhhhHHHHHHhhCCC-----CCCCCCCCC
Q 014287 207 SLGLDMMFRTCTVQVNLDFSSE-------------------ADMIRKFRAGLALQPIATALFANSP-----FTEGKPNGY 262 (427)
Q Consensus 207 ~~g~~~m~~t~s~qVhld~~~~-------------------~~~v~~~n~~~~l~P~llALsANSP-----f~~G~~tg~ 262 (427)
+..++ +||+|||++++++ +..+...|..+.+.|+|++||+||| ||.|++||+
T Consensus 141 --~~~q~--IsGiH~N~s~~d~l~~~l~~~~~~~~~~~~~~~~y~~lirn~~r~~wlL~yLfgASP~~~~sF~~g~~t~l 216 (518)
T 1va6_A 141 --ALMQT--ISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAISSSFLQGKPTSL 216 (518)
T ss_dssp --HHHHT--CCEEEEEEECCHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCBSEECGGGC----CCS
T ss_pred --cchhe--eeeEEEEEecCHHHHHHHHhhccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCccccccccCCCCCCc
Confidence 34445 9999999999986 3677788899999999999999999 889999988
Q ss_pred c---------------cccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCce-----eeEeecCccccCCCCcHHH
Q 014287 263 L---------------SMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPM-----YFVYRKKKYIDCAGMSFRD 322 (427)
Q Consensus 263 ~---------------S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~-----i~v~r~~~~~~~~~~~f~d 322 (427)
. |+|...|......+.| +|..|.|+..|.++++.++++|- |=+.++|+|.-..
T Consensus 217 ~~~~~~~~t~y~p~atSlR~s~~Gy~n~~q~~-l~~~y~sl~~Y~~~l~~~i~tp~~~y~~ig~~~~g~~~Qln------ 289 (518)
T 1va6_A 217 PFEKTESGMYYLPYATSLRLSDLGYTNKSQSN-LGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQIN------ 289 (518)
T ss_dssp CCEECTTSCEECTTCSBGGGSTTSSCCGGGTT-SCCCSSCHHHHHHHHHHHHTCBCHHHHTTCSEETTEECCSC------
T ss_pred cccccccccccCCCcccccccccCCCCCccCC-CCCCcCCHHHHHHHHHHHHhCccchhhhhccccccchhccc------
Confidence 4 9999888544322445 57789999999999999988652 1112333221100
Q ss_pred hhhCCCCCCCCCCCChhhhhhcccCCCCCCcccc------------------eEeeecCCCCch-h--hhhHHHHHHHHh
Q 014287 323 FLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKR------------------YLEMRGADGGPW-R--RLCALPAFWVGL 381 (427)
Q Consensus 323 ~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~~------------------~IEiR~~Da~P~-~--~~~A~~Al~~GL 381 (427)
.-.-.....+|++||||+ |||+|++|.+|. + .....++|+..+
T Consensus 290 ----------------tg~Lq~e~E~Y~~IRpk~~~~~ge~~~~aL~~~Gi~yIEvR~~DvnPf~~~Gi~~~~~~fl~~f 353 (518)
T 1va6_A 290 ----------------SNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLF 353 (518)
T ss_dssp ----------------SBSCSSGGGCCCSEEEECCCCTTCCHHHHHHHHCCCEEEEEEEECCTTSTTSCCHHHHHHHHHH
T ss_pred ----------------cccccccCeeeeccccCCCCCCCcCcHHHHHhCCCCeEEEEeccCCCCccccccHHHHHHHHHH
Confidence 001122455799999973 899999999994 3 344445665554
Q ss_pred c
Q 014287 382 L 382 (427)
Q Consensus 382 l 382 (427)
+
T Consensus 354 l 354 (518)
T 1va6_A 354 M 354 (518)
T ss_dssp H
T ss_pred H
Confidence 3
No 5
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=99.90 E-value=4.5e-24 Score=233.24 Aligned_cols=225 Identities=17% Similarity=0.192 Sum_probs=164.2
Q ss_pred CCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHH
Q 014287 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQT 151 (427)
Q Consensus 73 ~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l 151 (427)
..++|||.|+++||+ +|..+.... .++| |-......|+.| ..+|+|+.|+||.++.++
T Consensus 18 ~~~~GiE~E~lrVd~-~g~la~~~h-p~~l-------------------g~~~~~~~i~td~ses~lE~iTpv~~~~~~~ 76 (757)
T 3ln7_A 18 QGSFGLEKESQRVTA-DGAIVTTPH-PAVF-------------------GNRRYHPYIQTDFAESQLELITPPTKKLEDT 76 (757)
T ss_dssp CEEEEEEEEEECEET-TSBBCCSCC-CSSS-------------------CCTTTCSSEECSSSTTEEEEEEEEESSHHHH
T ss_pred cCCceEEeEeeEECC-CCCcCCCcC-hHHh-------------------cCcccCCCCCchhhhhheeeeCcCCCCHHHH
Confidence 569999999999998 666443210 1112 111112457777 579999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEecccCCCCCC-CCCCCC-----CchHHHH-HHHhcccccchhhhhhcccceeEeecC
Q 014287 152 CAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL-KDIPVM-----PKGRYEI-MRNYMPKVGSLGLDMMFRTCTVQVNLD 224 (427)
Q Consensus 152 ~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~-~~~~~~-----p~~RY~~-m~~~~~~~g~~g~~~m~~t~s~qVhld 224 (427)
.++|....+.+.+.++ .|..|++.|++|..+. .+.++. +++||+. |.++|+ ++.++ +||+|||++
T Consensus 77 ~~~L~~l~~~~~~~~~-~~e~lwp~smp~~l~~~~~ip~a~~~~~~~~~Yr~~L~~ryG-----~~~q~--i~GiH~n~s 148 (757)
T 3ln7_A 77 FRWLSVIHEVVQRSLP-EEEYIFPLSMPAGLPAEEQIRVAQLDNPEDVAYREYLVKIYG-----KNKQM--VSGIHYNFQ 148 (757)
T ss_dssp HHHHHHHHHHHHHHSC-TTEECCCSSSCSBCCC---CCCCCCSSHHHHHHHHHHHHHHC-----SHHHH--CCCCEEEEE
T ss_pred HHHHHHHHHHHHHHhc-CCCceeeccCCCcCCCCCCCCccccCCCccHHHHHHHHHHhc-----hhhce--eeeEEEEEe
Confidence 9999999999888865 5778888888876432 233443 5899996 877763 34455 899999999
Q ss_pred CCCHH---------------H-----HHHHHHHHhhhhHHHHHHhhCCCCC-----CCC----CCCCc-cccHHHHccCC
Q 014287 225 FSSEA---------------D-----MIRKFRAGLALQPIATALFANSPFT-----EGK----PNGYL-SMRSHIWTDTD 274 (427)
Q Consensus 225 ~~~~~---------------~-----~v~~~n~~~~l~P~llALsANSPf~-----~G~----~tg~~-S~R~~iw~~~~ 274 (427)
++++. + .....|..+.+.|+|++||+|||+| .|+ +++|+ |+|...|..++
T Consensus 149 ~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~~r~~wll~yL~gaSP~~~~~f~~g~~~~~~~~~~~S~R~s~~gy~~ 228 (757)
T 3ln7_A 149 LSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNFLRYQWILLYLLAATPTVESAYFKDGSPLAKGQFVRSLRSSQYGYVN 228 (757)
T ss_dssp ECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC----CTTTCSSCCSSCCCSBSTTSSSSCCC
T ss_pred cChHHHHHHhhhcccchhHHHHHhHHHHHHHHhhHhHHHHHHHHhhCCcccccccccCCCCCCCCCCcccccccccCCCC
Confidence 99641 1 1334666677999999999999999 552 23444 99999999997
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCcc
Q 014287 275 NNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRL 354 (427)
Q Consensus 275 ~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~ 354 (427)
++ ++|..|.|+..|.++++.++++.++.. .+.+|++|||
T Consensus 229 --~~-~~~~~~~s~~~Y~~~l~~~v~~g~l~~--------------------------------------~~e~y~~iRp 267 (757)
T 3ln7_A 229 --DP-EINVSFDSVEKYVESLEHWVSTGKLIA--------------------------------------EKEFYSNVRL 267 (757)
T ss_dssp --CS-SCCCCCSCHHHHHHHHHHHHHC-CCSS--------------------------------------STTCCCSEEE
T ss_pred --CC-CCCCCcCCHHHHHHHHHHHHHcCCccc--------------------------------------cCceeeeecC
Confidence 34 467799999888888888887665521 2346888888
Q ss_pred c-------------ceEeeecCCCCc
Q 014287 355 K-------------RYLEMRGADGGP 367 (427)
Q Consensus 355 ~-------------~~IEiR~~Da~P 367 (427)
| .|||+|++|.+|
T Consensus 268 k~~~p~~~l~~~Gi~yiEvR~~D~~P 293 (757)
T 3ln7_A 268 RGAKKAREFLTTGIQYLEFRLFDLNP 293 (757)
T ss_dssp ESCSSGGGHHHHCCCEEEECCCCCCT
T ss_pred CCCCChhhHHhCCCCEEEEEeccCCC
Confidence 8 279999999999
No 6
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=99.84 E-value=9.3e-21 Score=197.25 Aligned_cols=207 Identities=18% Similarity=0.166 Sum_probs=145.9
Q ss_pred HHHcCC---CCCCCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCcee
Q 014287 63 YLASGC---KPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQF 138 (427)
Q Consensus 63 ~~~~~~---~~~~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qi 138 (427)
||.+.. |.+.++++|||.|.+.||+ +|..+...- .++|+ -......|+-| ..+|+
T Consensus 19 ~~~~~~~~~~~~~~~~~GIE~E~lRVd~-~G~La~tph-P~~LG-------------------s~lthp~IttDfsEsql 77 (525)
T 3nzt_A 19 YFQSNAMYDFKKINNLRGIERETLRVTD-CGNLATSNH-PDGLG-------------------HKLTNNSITVDFSENLL 77 (525)
T ss_dssp -------CCCSSCCCEEEEEEEEEEEET-TSCBCCSCS-CGGGC-------------------CTTTCSSEEESSBTTEE
T ss_pred eeeccccccccCCCCCcceEeeeeEECC-CCCcCCCCC-hHhhc-------------------cCccCCCCCchhhhhHh
Confidence 666664 5778999999999999998 576432110 12221 11112457777 57999
Q ss_pred EeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-CCCCC---------CchHHH-HHHHhcccccc
Q 014287 139 ELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---------PKGRYE-IMRNYMPKVGS 207 (427)
Q Consensus 139 Elst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-~~~~~---------p~~RY~-~m~~~~~~~g~ 207 (427)
|+.|+|+.++.++.++|....+.+...++ .+-.|++.++ |+.... ++++. .|.+|+ .+.+++
T Consensus 78 E~iTp~~~s~~ea~~~L~~l~~~v~~~l~-~~E~LWp~Sm-Pl~~~~~~ipiA~yg~sn~g~~k~~YR~gL~~rY----- 150 (525)
T 3nzt_A 78 ELITKPHDSIDKAIGELYQLSAFTLDNMH-SDEIILNTSM-PLSANDNDIQEADFGSSNSGRMKRVYRKGLSARY----- 150 (525)
T ss_dssp EEECCCBSSHHHHHHHHHHHHHHHHHHSC-TTEEECCSSS-CCSCCGGGCCBCCCCSSHHHHHHHHHHHHHHHHH-----
T ss_pred hhcCCCCCCHHHHHHHHHHHHHHHHHhhC-CCCeEEeecC-CCCCCcCCCceeeccccccCcchHHHHHHHHHHh-----
Confidence 99999999999999999999988888764 4567888885 443332 36664 568898 666655
Q ss_pred hhhhhhcccceeEeecCCCCH--------------HHHHHHHHHHhhhhHHHHHHhhCCCCC-----CCCCCCCc-----
Q 014287 208 LGLDMMFRTCTVQVNLDFSSE--------------ADMIRKFRAGLALQPIATALFANSPFT-----EGKPNGYL----- 263 (427)
Q Consensus 208 ~g~~~m~~t~s~qVhld~~~~--------------~~~v~~~n~~~~l~P~llALsANSPf~-----~G~~tg~~----- 263 (427)
|..| -.+||+|||++++++ +......|-.+.+.|+|++||++||++ .|++|++.
T Consensus 151 -G~~~-q~IsGiH~Nfsl~~~~~~~l~~~~~~~~s~~Y~~Lirnf~Ry~Wll~YLfGASP~~~~sF~~g~~~~l~~~~~~ 228 (525)
T 3nzt_A 151 -GKIM-QIISGIHYNFSFDKDLISNIATNKQVSISDIYFDVLNNYFEFMWLLPYLFGASPICAKTSVKNKPDYLSVLDDK 228 (525)
T ss_dssp -CSGG-GGCCBEEEEEECCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTHHHHHHCCBCEEEGGGCSSCCTTCEECSSS
T ss_pred -chhh-eeeeeEEEEecCCHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhhCCcccccccccCCCCcccccCCc
Confidence 3333 239999999999964 122255667778999999999999998 89999888
Q ss_pred --------cccHHH--HccCCCCCCCCCCCCCCCchhHHHHHHHHhcCc
Q 014287 264 --------SMRSHI--WTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVP 302 (427)
Q Consensus 264 --------S~R~~i--w~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p 302 (427)
|.|... |.+.+ +++ ++..|.|+..|.+.++.++.+|
T Consensus 229 t~y~p~atSlR~S~~GY~N~~--q~~-l~i~ynsl~~Yv~~l~~av~tp 274 (525)
T 3nzt_A 229 FYVGEYATSLRMSDLGYTSPA--QKD-LAISYDNVKAYVKDLIQATDDT 274 (525)
T ss_dssp EEECTTCSBGGGSSCC--CHH--HHT-CCCCCSCHHHHHHHHHHHHHSB
T ss_pred cccCCCcceeeccccCCCCCc--ccC-CCCCCCCHHHHHHHHHHHHhCc
Confidence 999888 44444 445 4678999988888888888764
No 7
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A*
Probab=99.69 E-value=4e-16 Score=163.90 Aligned_cols=207 Identities=14% Similarity=0.104 Sum_probs=152.5
Q ss_pred HHHHHHHHHcCC-CCCCCCeeEEEeccccccCCC----CCCCChHHHHHHHHHHhhccccchhccCccccccccCCceee
Q 014287 57 KEDLVGYLASGC-KPKEKWRIGTEHEKFGFEFGT----LHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSIS 131 (427)
Q Consensus 57 ~~~l~~~~~~~~-~~~~~~~iGvE~E~~lvd~~t----~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~it 131 (427)
+++++..+++.. +.+.....|-|+|+++|+.+. .++...+ .++|+.+++.. . .. ..++...+.+|..++.
T Consensus 27 I~Qfl~i~~~~k~r~~d~l~WGDEIEy~LV~~d~~~k~arlsl~~--~eIL~~L~~~~-~-~~-~~~~~p~~~PEyGryM 101 (692)
T 3ig5_A 27 IEQLLYIFQAAGKRDNDPLFWGDELEYMVVDFDDKERNSMLDVCH--DKILTELNMED-S-SL-CEANDVSFHPEYGRYM 101 (692)
T ss_dssp HHHHHHHHHHHTTCCCCCCEEEEEEEEEEEEEETTTTEEEECCSC--TTHHHHTTTTT-H-HH-HHHTTEEEECCSBTTE
T ss_pred HHHHHHHHHHhcccCCCcccccceeEEEEEEecCCCceeeecccH--HHHHHHHhhhh-h-hc-ccCCCCcccchhhcee
Confidence 456666555554 677889999999999999542 3466666 78888876631 0 00 0112234566766665
Q ss_pred ecCCceeEeecCccC----CHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEecccCCCCCCCC--------
Q 014287 132 LEPGGQFELSGAPLE----TLHQTCAEVNSHLYQVKAVAEEM-------------GIGFLGIGFQPKWGLKD-------- 186 (427)
Q Consensus 132 lEpg~qiElst~p~~----~l~~l~~el~~~l~~l~~~a~~~-------------g~~L~~~G~~P~~~~~~-------- 186 (427)
||. |++.+ ..+.++..+...+..++..+++. |..++.+|+-|..+..+
T Consensus 102 ------lE~-TP~~Py~g~~~~~VE~nMr~RR~~a~~~l~~~~~~~~~~~~~~~~~~~~ltit~FPrLG~~dFt~p~~~~ 174 (692)
T 3ig5_A 102 ------LEA-TPASPYLNYVGSYVEVNMQKRRAIAEYKLSEYARQDSKNNLHVGSRSVPLTLTVFPRMGCPDFINIKDPW 174 (692)
T ss_dssp ------EEE-EESSCEESCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSTTEEEEEECCSSCTTTTSTTCBSSSCTT
T ss_pred ------ecc-CCCCCCCCChhHHHHHHHHHHHHHHHHHHhhhhcccccccccccCCeeEEEeeccccCCCCCCCCCCCCC
Confidence 554 33322 12388889999999999999886 88999999999875321
Q ss_pred --------------CCCCCchHHHHHHHhcccc-cc--------------------------------------------
Q 014287 187 --------------IPVMPKGRYEIMRNYMPKV-GS-------------------------------------------- 207 (427)
Q Consensus 187 --------------~~~~p~~RY~~m~~~~~~~-g~-------------------------------------------- 207 (427)
..+++++||..+.+-.... |.
T Consensus 175 ~~~~~~s~Slf~PDe~In~HpRF~tLT~NIR~RRG~KV~InIPif~D~nTp~~d~ti~~~~~f~~~~~~~~~aa~p~~Iy 254 (692)
T 3ig5_A 175 NHKNAASRSLFLPDEVINRHVRFPNLTASIRTRRGEKVCMNVPMYKDIATPETDDSIYDRDWFLPEDKEAKLASKPGFIY 254 (692)
T ss_dssp SSCCTTTCCSSCCGGGBCSSTHHHHHHHHHHHHHSSCCCEEEEBCCCTTCCSSCTTCCCCCSSTTGGGTHHHHCCTTEEE
T ss_pred CCCCcccccccCCHhhcCCCcchHHHHHHHHHhcCCCceEeeccccCCCCCCCCcccchhhhCCccccccccccCCCeeE
Confidence 3468899999998765321 21
Q ss_pred ---hhhhhhcccceeEeecCCCCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCC
Q 014287 208 ---LGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA 278 (427)
Q Consensus 208 ---~g~~~m~~t~s~qVhld~~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rt 278 (427)
+|..| .+|++|||+++.+.+++...|+.+..+.|+++||+|||||+.|.. .|..+|..+.+++.++||
T Consensus 255 MDaMgFGM--GccCLQvTfQa~ni~eAR~lYDqL~~l~PimLALSAASP~~kG~l-ad~DtRW~vIs~sVDdRt 325 (692)
T 3ig5_A 255 MDSMGFGM--GCSCLQVTFQAPNINKARYLYDALVNFAPIMLAFSAAAPAFKGWL-ADQDVRWNVISGAVDDRT 325 (692)
T ss_dssp ECSTHHHH--TSCBEEEEEEESSHHHHHHHHHHHTTHHHHHHHHTCCCCEETTEE-BSBCCSHHHHHHHTCCCC
T ss_pred eccccccc--cccceeeeeccCCHHHHHHHHHhhhhhHHHHHHHhhcChhhccee-cccchhHHHHHhhccCCC
Confidence 11112 278899999999999999999999999999999999999999985 789999999999988886
No 8
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=97.20 E-value=0.0028 Score=68.24 Aligned_cols=48 Identities=21% Similarity=0.139 Sum_probs=38.2
Q ss_pred eeecC-CceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCC
Q 014287 130 ISLEP-GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 181 (427)
Q Consensus 130 itlEp-g~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~ 181 (427)
+..|- .||.|+...+. +.-.+.+.+.-....++.+|+++|+... ++|.
T Consensus 283 ~H~EvaPGQ~EI~~~~~-~al~AAD~~~l~K~vvK~VA~~hGl~AT---FMPK 331 (729)
T 3o6x_A 283 RHNEVAPNQFELAPIFE-NCNLANDHNQLVMDLMKRIARKHHFAVL---FHEK 331 (729)
T ss_dssp ECBCSSTTEECCEECCE-EHHHHHHHHHHHHHHHHHHHHHTTEEEE---CSSC
T ss_pred eecCCCCCceEeccCCC-hHHHHHHHHHHHHHHHHHHHHHhCCEEE---Eecc
Confidence 44553 37999999886 5778899999999999999999998664 4554
No 9
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=97.07 E-value=0.0074 Score=62.57 Aligned_cols=91 Identities=20% Similarity=0.114 Sum_probs=62.2
Q ss_pred ceeeecCC--ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccc
Q 014287 128 QSISLEPG--GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV 205 (427)
Q Consensus 128 ~~itlEpg--~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~ 205 (427)
..+..|-+ ||.||+..+. +.-++.+.+.-+...++++|+++|+... +.|+.-.
T Consensus 210 e~~h~E~~~pGQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpKP~~--------------------- 264 (473)
T 3ng0_A 210 EKHHHEVASGGQNELGIKFD-KLVNSADNLMIYKYVIKNVAKKYGKTVT---FMPKPIF--------------------- 264 (473)
T ss_dssp EEEEECSSTTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST---------------------
T ss_pred EEeecCcCCCCceEEEccCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEE---EcCcccC---------------------
Confidence 34566744 7999999985 5778899999999999999999998654 4443110
Q ss_pred cchhhhhhcccceeEeecCCCC--------H------HHHHHHHHHHhhhhHHHHHHhh
Q 014287 206 GSLGLDMMFRTCTVQVNLDFSS--------E------ADMIRKFRAGLALQPIATALFA 250 (427)
Q Consensus 206 g~~g~~~m~~t~s~qVhld~~~--------~------~~~v~~~n~~~~l~P~llALsA 250 (427)
|. ..+|+|+|+.+-+ + +.+...+-.++..+|.+.|+++
T Consensus 265 ---~~----~GSG~H~H~Sl~~~g~n~F~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~ 316 (473)
T 3ng0_A 265 ---ND----NGSGMHVHQSLWKDGQPLFAGDKYAGFSQMGLWYIGGILKHAPALLAFTN 316 (473)
T ss_dssp ---TS----CCCCEEEEEEEEETTEETTBSSSGGGBCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ---CC----CCCeeEEEEeeccCCccccCCCCccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 11 1456666654310 0 2345556667788899999985
No 10
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=97.06 E-value=0.012 Score=61.15 Aligned_cols=91 Identities=19% Similarity=0.104 Sum_probs=62.0
Q ss_pred eeeec--CCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhccccc
Q 014287 129 SISLE--PGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 206 (427)
Q Consensus 129 ~itlE--pg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g 206 (427)
.+..| |.||.|++..+.. .-++++.+.-....++++|+++|+... +.|+.-.
T Consensus 223 ~~h~E~gp~GQ~Ei~~~~~~-~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpKP~~---------------------- 276 (486)
T 4acf_A 223 KGHHEVGSGGQAEINYQFNS-LLHAADDMQLYKYIIKNTAWQNGKTVT---FMPKPLF---------------------- 276 (486)
T ss_dssp EEEECSSTTTEEEEEECCEE-HHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST----------------------
T ss_pred eeeeeeeccceeEEeccCcc-hhhhhhHHHHHHHHHHHHHHHcCCeEE---Eeecccc----------------------
Confidence 45566 4489999998864 778889999999999999999998664 3443110
Q ss_pred chhhhhhcccceeEeecCCCC-----------H----HHHHHHHHHHhhhhHHHHHHhhC
Q 014287 207 SLGLDMMFRTCTVQVNLDFSS-----------E----ADMIRKFRAGLALQPIATALFAN 251 (427)
Q Consensus 207 ~~g~~~m~~t~s~qVhld~~~-----------~----~~~v~~~n~~~~l~P~llALsAN 251 (427)
|. ..+|+|+|+..-+ . +.+-.....++..+|.+.|+++-
T Consensus 277 --~~----~GsG~H~H~Sl~~~g~n~f~~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P 330 (486)
T 4acf_A 277 --GD----NGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNP 330 (486)
T ss_dssp --TS----CCCCEEEEEEEEETTEESSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred --CC----CcccceeeeeeccCCCccccccccccccchHHHHHHHHHHHhhhcceeeecC
Confidence 11 1466777766421 0 23444556667788888888763
No 11
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.011 Score=59.38 Aligned_cols=45 Identities=27% Similarity=0.261 Sum_probs=37.1
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014287 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 129 ~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
.+..|-+ ||.|++..++. .-++.+.+.-+...++++|+++|+...
T Consensus 189 ~~h~E~~pGQ~Ei~~~~~~-~l~aAD~~~~~K~~vk~vA~~~G~~AT 234 (370)
T 3fky_A 189 GINAEVMPSQWEFQVGPCT-GIDMGDQLWMARYFLHRVAEEFGIKIS 234 (370)
T ss_dssp EEEECSSTTEEEEEEEEEE-THHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred eeecCcCCCceEEecCCCC-HHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence 4566633 79999999986 557888999999999999999998654
No 12
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=96.95 E-value=0.0038 Score=64.64 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=63.4
Q ss_pred eeeec--CCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhccccc
Q 014287 129 SISLE--PGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 206 (427)
Q Consensus 129 ~itlE--pg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g 206 (427)
.+..| ||||.||+..+ .+.-.+.+.+.-....++++|+++|+... ++|+.-.
T Consensus 208 ~~h~E~apggQ~Ei~~~~-~~~l~aAD~~~~~k~~vk~vA~~hGl~at---FmpKP~~---------------------- 261 (468)
T 1f52_A 208 AHHHEVATAGQNEVATRF-NTMTKKADEIQIYKYVVHNVAHRFGKTAT---FMPKPMF---------------------- 261 (468)
T ss_dssp EEEECSSTTTEEEEEECC-EEHHHHHHHHHHHHHHHHHHHHHTTCEEE---CCSCSST----------------------
T ss_pred EeecCCCCceeEEEeccC-CCHHHHHHHHHHHHHHHHHHHHHhCCEEE---EeCCCCC----------------------
Confidence 44566 55699999988 56888999999999999999999998764 4554210
Q ss_pred chhhhhhcccceeEeecCCCC--------------HHHHHHHHHHHhhhhHHHHHHhh
Q 014287 207 SLGLDMMFRTCTVQVNLDFSS--------------EADMIRKFRAGLALQPIATALFA 250 (427)
Q Consensus 207 ~~g~~~m~~t~s~qVhld~~~--------------~~~~v~~~n~~~~l~P~llALsA 250 (427)
|. ...|+|+|+.+.+ .+.+...+-.++..+|.+.|+++
T Consensus 262 --g~----~GSG~H~h~Sl~~~g~Nlf~~~~~~~ls~~~~~~iaGll~h~~~l~a~~a 313 (468)
T 1f52_A 262 --GD----NGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALAN 313 (468)
T ss_dssp --TS----CCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHS
T ss_pred --CC----CCCCcceeeccccCCCcccCCCCcchHHHHHHHHHHHHHHHHHHhHhHhc
Confidence 11 1456666664421 02455566677889999999976
No 13
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=96.93 E-value=0.0091 Score=60.27 Aligned_cols=45 Identities=18% Similarity=0.210 Sum_probs=36.1
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014287 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 129 ~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
.+..|-+ ||.||+..+...+ ++.+.+.-+...++++|+++|+...
T Consensus 211 ~~h~E~~pgQ~Ei~~~~~~~l-~aAD~~~~~k~~vk~vA~~~Gl~aT 256 (384)
T 2ojw_A 211 GTNAEVMPAQWEFQIGPCEGI-SMGDHLWVARFILHRVCEDFGVIAT 256 (384)
T ss_dssp EEEECSSTTEEEEEEEEEETT-HHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred eeecCCCCcceEEEcCCCcHH-HHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 4556633 6999999996644 5688999999999999999998654
No 14
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=96.90 E-value=0.0036 Score=62.60 Aligned_cols=49 Identities=27% Similarity=0.308 Sum_probs=38.2
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCC
Q 014287 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 181 (427)
Q Consensus 129 ~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~ 181 (427)
.+..|-+ ||.||+..+.. .-++.+.+.-+...++++|+++|+... ++|+
T Consensus 188 ~~h~E~~pgQ~Ei~~~~~~-~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpK 237 (356)
T 2d3a_A 188 GINGEVMPGQWEFQVGPSV-GISSGDQVWVARYILERITEIAGVVVT---FDPK 237 (356)
T ss_dssp EEEECSSTTEEEEEEEEEE-THHHHHHHHHHHHHHHHHHHHHTEEEE---CCSC
T ss_pred EeecCcCCCceEEecCCCC-HHHHHHHHHHHHHHHHHHHHHhCCEEE---ECCC
Confidence 4566633 69999999954 566888999999999999999998653 4554
No 15
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=96.81 E-value=0.0073 Score=62.07 Aligned_cols=154 Identities=20% Similarity=0.117 Sum_probs=89.8
Q ss_pred ccCCCCCC-HHHHHHHHH-cCCCCCCCCeeEEEeccccccCCCCCCCCh-H-----H----HHHHHHHHhhccccchhcc
Q 014287 49 VVVTEPLT-KEDLVGYLA-SGCKPKEKWRIGTEHEKFGFEFGTLHPMKY-E-----Q----IAELLNSIAERFDWEKVME 116 (427)
Q Consensus 49 ~~~~~~~~-~~~l~~~~~-~~~~~~~~~~iGvE~E~~lvd~~t~~~~~~-~-----~----i~~lL~~l~~~~g~~~~~~ 116 (427)
+....|.. ++.+++.++ .|. ...+|+|+||++++.......++ . . +.++...+.. .|
T Consensus 103 p~~~~pR~~L~r~~~~~~~~G~----~~~~g~E~EF~l~~~~p~~~~~~y~~~~~~~~~~~~~~i~~~l~~-~G------ 171 (443)
T 4hpp_A 103 PWPACPRSLLRAEVERYRDSGL----QVIAAFEHEFSLLGLPGERPAAAFSLQAQRAAGQFPGWLVSALAQ-AG------ 171 (443)
T ss_dssp BCTTCHHHHHHHHHHHHHHTTE----EEEEEEEEEEEEECCCSSSCCCTTCHHHHHHTTTHHHHHHHHHHH-TT------
T ss_pred CCCCChHHHHHHHHHHHHHcCC----eEEEEeeeEEEEeccccCCCCccCCCCcccchHHHHHHHHHHHHH-CC------
Confidence 33444444 445555554 344 36999999999997421111111 1 1 2233333222 12
Q ss_pred CccccccccCCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHH
Q 014287 117 GDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRY 195 (427)
Q Consensus 117 ~~~~igl~~e~~~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY 195 (427)
+.. ..+..|-+ ||.||+..+.. .-++.+.+......++++|+++|+... ++|+.- .
T Consensus 172 ------i~v--e~~h~E~~pgQ~Ei~~~~~~-~l~aAD~~~~~k~~vk~vA~~~G~~aT---FmpKP~------~----- 228 (443)
T 4hpp_A 172 ------TEP--EMFLPEYGQRQYEVTCRPAQ-GVAAADRAVNVREVTREVARQMGLRTC---FAPLPA------P----- 228 (443)
T ss_dssp ------CCE--EEEEECSSTTEEEEEECCEE-THHHHHHHHHHHHHHHHHHHHHTCEEE---CSSSSS------T-----
T ss_pred ------CCe--EEeecCCCCCceEEEecCCc-HHHHHHHHHHHHHHHHHHHHHhCCEEE---EecccC------C-----
Confidence 222 34556633 79999999964 567888899999999999999998664 344311 0
Q ss_pred HHHHHhcccccchhhhhhcccceeEeecCCCCH----------------HHHHHHHHHHhhhhHHHHHHhhCCC
Q 014287 196 EIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSE----------------ADMIRKFRAGLALQPIATALFANSP 253 (427)
Q Consensus 196 ~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~----------------~~~v~~~n~~~~l~P~llALsANSP 253 (427)
|. ..+|+|+|+.+-+. +.+....-.++..+|.+.|+++-+.
T Consensus 229 -------------~~----~GsG~H~h~Sl~~~~G~n~f~~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~~ 285 (443)
T 4hpp_A 229 -------------GA----VTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTA 285 (443)
T ss_dssp -------------TC----CCCCEEEEEEEEETTSCBSSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSG
T ss_pred -------------CC----CcccceeeeeeecCCCCccccCCCCccchhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 10 14566666654210 1234555667778899998887443
No 16
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=96.40 E-value=0.033 Score=57.17 Aligned_cols=107 Identities=16% Similarity=0.246 Sum_probs=66.1
Q ss_pred ccCCCCCC-HHHHHHHHHcCCCCCCC-CeeEEEeccccccCCC-CC---------------CCCh--HHHHHHHHHHhhc
Q 014287 49 VVVTEPLT-KEDLVGYLASGCKPKEK-WRIGTEHEKFGFEFGT-LH---------------PMKY--EQIAELLNSIAER 108 (427)
Q Consensus 49 ~~~~~~~~-~~~l~~~~~~~~~~~~~-~~iGvE~E~~lvd~~t-~~---------------~~~~--~~i~~lL~~l~~~ 108 (427)
+....|.. ++.+++.+++- +-. ..+|+|+||++++.+. +. +.+. ....++...+..
T Consensus 103 p~~~~pR~iLkr~~~~~~~~---G~~~~~~g~E~EF~l~~~~~~g~~~~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~- 178 (444)
T 3qaj_A 103 PFEGDPRNNLKRILKEMEDL---GFSDFNLGPEPEFFLFKLDEKGEPTLELNDKGGYFDLAPTDLGENCRRDIVLELEE- 178 (444)
T ss_dssp BCSSCHHHHHHHHHHHHHTT---TCCEEEEEEEECEEEEEECSSSCEEEEESCCCCTTCCTTTSCCTTHHHHHHHHHHT-
T ss_pred CCCCChHHHHHHHHHHHHHc---CCCeeeEEeceEEEEEecCCCCCCCCcCcCCCCccccCCCcchHHHHHHHHHHHHH-
Confidence 33344444 45555555432 123 5799999999998532 21 1111 112344444322
Q ss_pred cccchhccCccccccccCCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014287 109 FDWEKVMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 109 ~g~~~~~~~~~~igl~~e~~~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
.| +.. ..+..|-+ ||.||+..+. +.-++.+.+.-....++++|+++|+...
T Consensus 179 ~G------------i~v--e~~h~E~~pGQ~Ei~~~~~-~~l~aAD~~~~~k~~vk~vA~~~G~~aT 230 (444)
T 3qaj_A 179 MG------------FEI--EASHHEVAPGQHEIDFKYA-GAVRSCDDIQTFKLVVKTIARKHGLHAT 230 (444)
T ss_dssp TT------------CCE--EEEEECSSTTEEEEEECCE-EHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred CC------------CCe--EEeEcCcCCCcEEEecCCC-hHHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 22 222 34556633 7999999986 5778899999999999999999997553
No 17
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=88.21 E-value=0.12 Score=52.79 Aligned_cols=112 Identities=12% Similarity=0.061 Sum_probs=65.0
Q ss_pred ccCCCCCC-HHHHHHHHHc-CCCCCCCCeeEEEeccccccCCC---CCCCChH-----HHHHHHHHHhhccccchhccCc
Q 014287 49 VVVTEPLT-KEDLVGYLAS-GCKPKEKWRIGTEHEKFGFEFGT---LHPMKYE-----QIAELLNSIAERFDWEKVMEGD 118 (427)
Q Consensus 49 ~~~~~~~~-~~~l~~~~~~-~~~~~~~~~iGvE~E~~lvd~~t---~~~~~~~-----~i~~lL~~l~~~~g~~~~~~~~ 118 (427)
+....|.. ++.+++.+++ |..+ ...+|+|+||++++.+. +.|..+. ...++++. +.+.=
T Consensus 94 P~~~~pR~iLk~~~~~~~~~G~~d--~~~~g~E~EF~l~~~~~~~~~~p~y~~~~~~~~~~~~~~~---------i~~~l 162 (421)
T 2j9i_A 94 AAAASPRYIARAALAQLQAAGAAA--GLLSAFIADFCIFGVPEVINSKTISFPASTTAAAADQPQE---------AAAGG 162 (421)
T ss_dssp SCSCCHHHHHHHHHHHHHHTTSCS--EECCEECCCCEEESCCEEEECSSCEEEECCCTTCTTGGGS---------CCTTC
T ss_pred CCCCChHHHHHHHHHHHHhcCCcc--CceEEeeeEEEEEecCCCCCCCCCcCCCCcccchhHHHHH---------HHHHH
Confidence 33444444 4555555553 3321 46899999999998642 2221110 00111111 11111
Q ss_pred cccccccCCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014287 119 YIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 119 ~~igl~~e~~~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
. .|+..+ .+..|-+ ||.||+..+..+.-++.+.+.-....++++|+++|+...
T Consensus 163 ~-~Gi~ve--~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~at 216 (421)
T 2j9i_A 163 A-AGAAAG--AAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIAS 216 (421)
T ss_dssp C-CSCCCB--TTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEE
T ss_pred h-CCCCeE--EeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 1 233333 3455633 699999988763567888888999999999999998654
No 18
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=34.58 E-value=8.7 Score=22.63 Aligned_cols=14 Identities=21% Similarity=0.230 Sum_probs=11.7
Q ss_pred ccCCCCCCcccceE
Q 014287 345 LTTIFPEVRLKRYL 358 (427)
Q Consensus 345 lstifp~vR~~~~I 358 (427)
.|.+|-|||+.|++
T Consensus 9 rsslflwvr~ng~~ 22 (26)
T 2bp3_S 9 RSSLFLWVRPNGRV 22 (26)
T ss_pred hheEEEEEccCCee
Confidence 57789999999875
No 19
>4b0t_A PUP--protein ligase; pupylation, depupylation, prokaryotic ubiquitin-like protein, proteasome; HET: ADP; 2.16A {Corynebacterium glutamicum}
Probab=26.23 E-value=58 Score=33.42 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=41.9
Q ss_pred CeeEEEeccccccCCC-CCCCChHHHHHH-HHHHhhccccchhccCccccccccCCceeeecCCceeEeecCccCCHHHH
Q 014287 74 WRIGTEHEKFGFEFGT-LHPMKYEQIAEL-LNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQT 151 (427)
Q Consensus 74 ~~iGvE~E~~lvd~~t-~~~~~~~~i~~l-L~~l~~~~g~~~~~~~~~~igl~~e~~~itlEpg~qiElst~p~~~l~~l 151 (427)
.-+|+|-||=+.-... .++.....+... +...-+.. ...+ .+..+|.++=++-|+-.|++|+-|.++.++
T Consensus 11 RI~GiETEYGIs~~~~~~r~~~~d~~ar~lf~p~v~~~------r~~N--v~l~NGaRlYvDvgaHPEYstpEc~~~~d~ 82 (493)
T 4b0t_A 11 RIMGIETEYGLTFVDGDSKKLRPDEIARRMFRPIVEKY------SSSN--IFIPNGSRLYLDVGSHPEYATAECDNLTQL 82 (493)
T ss_dssp CCEEEEEECEEEEEC------CTHHHHHHHHHHHHHHH------SCSE--EECTTSCEEECCTTSCCEEECCCBSSHHHH
T ss_pred ceeeecccceEeccCCCCCCCCHHHHHHHHhccccccc------cccc--eecCCcCeEeeecCCCccccCcccCCHHHH
Confidence 4679999987653322 233333333322 22211111 1223 235677889899888899999999998887
Q ss_pred HH
Q 014287 152 CA 153 (427)
Q Consensus 152 ~~ 153 (427)
..
T Consensus 83 v~ 84 (493)
T 4b0t_A 83 IN 84 (493)
T ss_dssp HH
T ss_pred HH
Confidence 65
Done!