Query 014288
Match_columns 427
No_of_seqs 294 out of 2544
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:53:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_A PDHE1-A type I, pyruvat 100.0 1.3E-72 4.5E-77 571.2 37.6 320 75-405 29-350 (365)
2 2bfd_A 2-oxoisovalerate dehydr 100.0 2.9E-71 9.9E-76 568.0 39.3 352 43-404 17-373 (400)
3 1qs0_A 2-oxoisovalerate dehydr 100.0 1.5E-71 5.2E-76 570.5 37.1 338 57-404 51-398 (407)
4 1w85_A Pyruvate dehydrogenase 100.0 2.8E-70 9.7E-75 555.1 39.0 329 57-404 20-353 (368)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 1.6E-66 5.5E-71 527.9 39.8 340 55-404 11-354 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 4.3E-56 1.5E-60 491.1 24.3 307 75-385 113-450 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 4.3E-55 1.5E-59 493.6 25.2 307 75-385 358-695 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 1.9E-54 6.6E-59 480.4 23.1 306 74-385 192-522 (933)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 4.3E-30 1.5E-34 276.8 19.7 233 65-327 11-291 (621)
10 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 7.8E-30 2.7E-34 275.1 15.4 237 61-326 9-295 (629)
11 1gpu_A Transketolase; transfer 100.0 9.9E-28 3.4E-32 260.6 20.6 228 109-347 28-281 (680)
12 3rim_A Transketolase, TK; TPP, 100.0 5.9E-27 2E-31 254.1 24.7 145 181-329 126-278 (700)
13 2e6k_A Transketolase; structur 100.0 2.1E-28 7E-33 264.8 12.7 163 181-348 111-282 (651)
14 1r9j_A Transketolase; domains, 99.9 5.3E-26 1.8E-30 246.7 22.1 160 181-344 109-278 (673)
15 2r8o_A Transketolase 1, TK 1; 99.9 6.4E-27 2.2E-31 253.9 14.4 223 109-344 24-276 (669)
16 1itz_A Transketolase; calvin c 99.9 3.9E-26 1.3E-30 247.9 18.1 251 75-343 9-289 (675)
17 3m49_A Transketolase; alpha-be 99.9 1.4E-25 4.6E-30 243.4 17.6 143 181-328 133-281 (690)
18 3l84_A Transketolase; TKT, str 99.9 5.2E-25 1.8E-29 236.9 21.9 205 110-328 27-250 (632)
19 3uk1_A Transketolase; structur 99.9 5.5E-25 1.9E-29 239.2 19.1 143 181-328 148-295 (711)
20 3mos_A Transketolase, TK; thia 99.9 1.5E-24 5.1E-29 233.2 21.2 136 182-329 115-251 (616)
21 2qtc_A Pyruvate dehydrogenase 99.9 1.1E-24 3.7E-29 241.4 20.1 280 61-345 56-424 (886)
22 3kom_A Transketolase; rossmann 99.9 1.3E-24 4.4E-29 235.1 19.4 144 181-329 109-258 (663)
23 4feg_A Pyruvate oxidase; carba 99.9 1.9E-23 6.4E-28 224.3 10.6 162 184-364 416-596 (603)
24 1v5e_A Pyruvate oxidase; oxido 99.7 1.9E-17 6.4E-22 177.2 10.2 122 185-322 410-541 (590)
25 1q6z_A BFD, BFDC, benzoylforma 99.7 2.3E-17 7.8E-22 174.1 7.0 114 188-320 401-525 (528)
26 2pan_A Glyoxylate carboligase; 99.7 5.4E-17 1.8E-21 174.4 8.7 124 184-322 438-582 (616)
27 1ozh_A ALS, acetolactate synth 99.6 6.4E-17 2.2E-21 172.2 6.4 119 184-321 416-544 (566)
28 2pgn_A Cyclohexane-1,2-dione h 99.6 7.1E-17 2.4E-21 172.6 6.3 121 185-324 421-551 (589)
29 1ybh_A Acetolactate synthase, 99.6 1.3E-16 4.6E-21 170.5 8.1 121 184-323 422-561 (590)
30 2vbi_A Pyruvate decarboxylase; 99.6 1.5E-16 5.1E-21 169.3 6.5 119 184-321 405-534 (566)
31 1ovm_A Indole-3-pyruvate decar 99.6 2.4E-16 8.2E-21 167.0 8.1 118 184-320 404-532 (552)
32 1t9b_A Acetolactate synthase, 99.6 1.7E-16 5.7E-21 172.5 7.0 121 184-323 509-640 (677)
33 2iht_A Carboxyethylarginine sy 99.6 1.9E-16 6.4E-21 168.8 6.9 118 184-320 432-561 (573)
34 2vbf_A Branched-chain alpha-ke 99.6 2.4E-16 8.1E-21 167.8 7.5 119 184-320 421-551 (570)
35 2vk8_A Pyruvate decarboxylase 99.6 2.3E-16 7.7E-21 167.7 6.9 123 184-320 409-542 (563)
36 2uz1_A Benzaldehyde lyase; thi 99.6 2.4E-16 8E-21 167.6 7.0 120 184-320 415-546 (563)
37 2c31_A Oxalyl-COA decarboxylas 99.6 4.3E-16 1.5E-20 165.8 8.3 118 184-322 422-549 (568)
38 3eya_A Pyruvate dehydrogenase 99.6 3.8E-16 1.3E-20 165.6 7.9 120 184-322 402-531 (549)
39 2wvg_A PDC, pyruvate decarboxy 99.6 5.5E-16 1.9E-20 164.9 7.9 118 184-320 409-541 (568)
40 2nxw_A Phenyl-3-pyruvate decar 99.6 3.7E-16 1.3E-20 166.3 5.1 118 184-320 418-542 (565)
41 2q28_A Oxalyl-COA decarboxylas 99.6 1.9E-15 6.3E-20 160.7 10.1 119 184-323 417-547 (564)
42 3ahc_A Phosphoketolase, xylulo 99.6 5.5E-15 1.9E-19 161.8 12.8 197 108-322 81-322 (845)
43 2x7j_A 2-succinyl-5-enolpyruvy 99.6 5.2E-16 1.8E-20 166.4 2.7 116 185-320 452-580 (604)
44 3hww_A 2-succinyl-5-enolpyruvy 99.6 1.4E-15 4.9E-20 161.5 4.7 115 185-320 414-539 (556)
45 3lq1_A 2-succinyl-5-enolpyruvy 99.5 1.7E-14 5.7E-19 154.0 4.6 111 189-320 437-560 (578)
46 2c42_A Pyruvate-ferredoxin oxi 99.1 1.4E-10 4.7E-15 133.0 10.9 98 217-321 953-1071(1231)
47 2pgn_A Cyclohexane-1,2-dione h 93.6 0.43 1.5E-05 50.4 11.9 106 195-318 57-164 (589)
48 2uz1_A Benzaldehyde lyase; thi 93.1 0.27 9.1E-06 51.6 9.3 95 218-318 68-163 (563)
49 1ybh_A Acetolactate synthase, 93.0 0.25 8.6E-06 52.2 8.9 108 194-318 63-171 (590)
50 1ozh_A ALS, acetolactate synth 92.8 0.24 8.4E-06 52.0 8.4 94 218-318 75-169 (566)
51 2iht_A Carboxyethylarginine sy 92.7 0.23 7.9E-06 52.2 8.2 95 218-319 75-171 (573)
52 3eya_A Pyruvate dehydrogenase 92.7 0.33 1.1E-05 50.8 9.2 94 217-318 67-161 (549)
53 2wvg_A PDC, pyruvate decarboxy 92.4 0.54 1.8E-05 49.3 10.4 110 194-319 54-169 (568)
54 1yd7_A 2-keto acid:ferredoxin 92.0 0.17 5.7E-06 51.1 5.7 108 193-319 76-188 (395)
55 1t9b_A Acetolactate synthase, 91.8 0.44 1.5E-05 51.4 9.1 106 195-317 134-240 (677)
56 4feg_A Pyruvate oxidase; carba 91.5 0.61 2.1E-05 49.4 9.6 92 218-317 77-169 (603)
57 2vbi_A Pyruvate decarboxylase; 91.4 0.81 2.8E-05 47.9 10.4 109 194-318 54-168 (566)
58 2nxw_A Phenyl-3-pyruvate decar 91.3 0.46 1.6E-05 49.9 8.3 96 218-318 86-185 (565)
59 1v5e_A Pyruvate oxidase; oxido 90.6 0.37 1.3E-05 50.9 6.8 92 218-317 70-162 (590)
60 1q6z_A BFD, BFDC, benzoylforma 90.5 0.65 2.2E-05 48.2 8.6 110 194-319 51-161 (528)
61 2pan_A Glyoxylate carboligase; 90.0 0.98 3.4E-05 47.8 9.6 93 219-318 94-187 (616)
62 2x7j_A 2-succinyl-5-enolpyruvy 89.6 1.1 3.7E-05 47.4 9.5 98 217-319 95-198 (604)
63 2q28_A Oxalyl-COA decarboxylas 88.7 0.59 2E-05 48.9 6.5 94 218-318 72-168 (564)
64 3lq1_A 2-succinyl-5-enolpyruvy 88.6 1.7 5.7E-05 45.7 10.1 108 195-318 63-177 (578)
65 2c31_A Oxalyl-COA decarboxylas 88.6 0.62 2.1E-05 48.8 6.7 93 218-317 74-169 (568)
66 2r8o_A Transketolase 1, TK 1; 88.3 2.6 9E-05 45.3 11.5 102 193-316 414-518 (669)
67 2e6k_A Transketolase; structur 88.0 2.5 8.4E-05 45.3 10.9 102 193-316 409-513 (651)
68 3mos_A Transketolase, TK; thia 87.7 1.7 5.9E-05 46.3 9.4 103 193-316 367-470 (616)
69 3kom_A Transketolase; rossmann 86.1 2.8 9.6E-05 45.0 10.1 101 193-315 415-518 (663)
70 2vk8_A Pyruvate decarboxylase 85.5 1.3 4.3E-05 46.4 6.9 96 218-318 68-169 (563)
71 1gpu_A Transketolase; transfer 85.0 2.9 0.0001 45.0 9.6 101 194-316 422-526 (680)
72 3l84_A Transketolase; TKT, str 84.7 3 0.0001 44.6 9.4 101 193-316 394-497 (632)
73 2vbf_A Branched-chain alpha-ke 84.1 2 7E-05 44.9 7.7 108 194-318 76-189 (570)
74 1ovm_A Indole-3-pyruvate decar 83.9 1.9 6.6E-05 44.8 7.4 108 194-318 56-169 (552)
75 3hww_A 2-succinyl-5-enolpyruvy 83.0 4.8 0.00017 41.9 10.1 94 217-318 72-170 (556)
76 3m49_A Transketolase; alpha-be 82.4 6.3 0.00022 42.5 10.9 102 193-316 439-543 (690)
77 1r9j_A Transketolase; domains, 82.1 6.6 0.00023 42.2 10.9 101 194-316 415-518 (673)
78 1itz_A Transketolase; calvin c 81.9 3.6 0.00012 44.3 8.7 101 194-316 427-531 (675)
79 2o1s_A 1-deoxy-D-xylulose-5-ph 81.5 3.3 0.00011 44.0 8.1 102 193-316 373-476 (621)
80 1ik6_A Pyruvate dehydrogenase; 79.5 6.1 0.00021 39.2 8.9 99 193-316 110-219 (369)
81 2o1x_A 1-deoxy-D-xylulose-5-ph 78.3 3.3 0.00011 44.1 6.9 101 193-316 376-478 (629)
82 3uk1_A Transketolase; structur 78.1 7.2 0.00025 42.2 9.6 99 194-315 461-562 (711)
83 2ozl_B PDHE1-B, pyruvate dehyd 75.2 4.5 0.00015 39.7 6.4 98 193-316 74-183 (341)
84 3rim_A Transketolase, TK; TPP, 74.5 14 0.00047 40.0 10.5 101 194-316 445-550 (700)
85 2c42_A Pyruvate-ferredoxin oxi 70.6 13 0.00045 42.7 9.7 113 193-325 66-178 (1231)
86 1qs0_B 2-oxoisovalerate dehydr 70.5 8.8 0.0003 37.3 7.3 100 193-316 64-173 (338)
87 2bfd_B 2-oxoisovalerate dehydr 65.4 6.4 0.00022 38.5 5.1 99 193-316 79-189 (342)
88 1umd_B E1-beta, 2-OXO acid deh 58.2 44 0.0015 32.0 9.6 98 193-315 63-171 (324)
89 1w85_B Pyruvate dehydrogenase 57.3 27 0.00092 33.6 7.8 98 193-315 62-170 (324)
90 2jgd_A 2-oxoglutarate dehydrog 49.8 41 0.0014 37.5 8.6 104 193-315 664-776 (933)
91 3tqr_A Phosphoribosylglycinami 49.1 24 0.00083 32.2 5.6 56 216-288 5-62 (215)
92 3obi_A Formyltetrahydrofolate 46.9 38 0.0013 32.3 6.9 54 216-288 89-146 (288)
93 3nrb_A Formyltetrahydrofolate 45.1 42 0.0014 32.0 6.9 55 216-288 88-145 (287)
94 4hhu_A OR280; engineered prote 43.9 87 0.003 26.0 7.6 38 275-312 78-115 (170)
95 3ibs_A Conserved hypothetical 43.8 1E+02 0.0035 26.7 8.9 72 217-288 111-197 (218)
96 2yic_A 2-oxoglutarate decarbox 43.7 61 0.0021 35.8 8.7 106 193-315 596-708 (868)
97 3p9x_A Phosphoribosylglycinami 42.4 32 0.0011 31.4 5.3 54 218-288 4-60 (211)
98 3o1l_A Formyltetrahydrofolate 41.5 71 0.0024 30.6 7.9 53 216-287 105-160 (302)
99 4ds3_A Phosphoribosylglycinami 41.1 79 0.0027 28.6 7.7 55 217-288 8-65 (209)
100 3n0v_A Formyltetrahydrofolate 40.3 41 0.0014 32.1 5.9 53 216-287 90-145 (286)
101 2zzd_B Thiocyanate hydrolase s 39.7 39 0.0013 29.5 5.1 32 347-378 113-144 (157)
102 3kcq_A Phosphoribosylglycinami 38.9 50 0.0017 30.1 6.1 57 216-289 8-67 (215)
103 3lou_A Formyltetrahydrofolate 37.9 41 0.0014 32.2 5.5 53 216-287 95-150 (292)
104 2xt6_A 2-oxoglutarate decarbox 36.3 83 0.0029 35.8 8.5 107 193-316 841-954 (1113)
105 1meo_A Phosophoribosylglycinam 33.6 77 0.0026 28.6 6.4 81 218-319 2-88 (209)
106 4hhu_A OR280; engineered prote 32.6 54 0.0019 27.2 4.6 33 280-312 2-34 (170)
107 3da8_A Probable 5'-phosphoribo 32.5 62 0.0021 29.4 5.6 80 218-319 14-98 (215)
108 3hbm_A UDP-sugar hydrolase; PS 32.1 1.2E+02 0.004 28.6 7.7 34 221-255 3-38 (282)
109 1n3y_A Integrin alpha-X; alpha 31.9 93 0.0032 26.5 6.5 81 217-305 110-193 (198)
110 2x5n_A SPRPN10, 26S proteasome 31.8 46 0.0016 29.4 4.5 33 219-251 109-141 (192)
111 2kl8_A OR15; structural genomi 31.5 58 0.002 24.1 4.1 29 284-312 5-33 (85)
112 3av3_A Phosphoribosylglycinami 30.4 36 0.0012 30.8 3.6 82 218-319 5-91 (212)
113 3hyn_A Putative signal transdu 27.7 48 0.0016 29.7 3.7 39 216-254 79-118 (189)
114 1jkx_A GART;, phosphoribosylgl 24.3 84 0.0029 28.4 4.9 54 218-288 2-58 (212)
115 3ri6_A O-acetylhomoserine sulf 23.3 1E+02 0.0034 30.7 5.7 50 91-143 83-132 (430)
116 3ghf_A Septum site-determining 22.3 1.4E+02 0.0046 24.5 5.4 46 273-318 9-56 (120)
117 1x0u_A Hypothetical methylmalo 22.1 84 0.0029 32.5 5.0 40 217-256 90-137 (522)
118 1ugp_A NitrIle hydratase alpha 21.9 1.2E+02 0.0041 27.3 5.2 40 347-386 20-64 (203)
119 1on3_A Methylmalonyl-COA carbo 20.8 97 0.0033 32.1 5.1 40 217-256 94-141 (523)
120 2ywr_A Phosphoribosylglycinami 20.7 58 0.002 29.5 3.0 56 218-289 3-60 (216)
No 1
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=1.3e-72 Score=571.22 Aligned_cols=320 Identities=39% Similarity=0.718 Sum_probs=303.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcCCCCEEEcCCcchHHHHhcCCCHHH
Q 014288 75 KLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARA 154 (427)
Q Consensus 75 ~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~~~D~v~~~yR~~~~~La~g~~~~~ 154 (427)
+.+++++++++|+.|+++|.||+++..+|++|++.||+|++.||||+++|++.+|+++|+|+++||+|++++++|+++.+
T Consensus 29 ~~l~~e~l~~~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~~~D~i~~~yR~~~~~~~~G~~~~~ 108 (365)
T 2ozl_A 29 TVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLITAYRAHGFTFTRGLSVRE 108 (365)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhCCCCEEehHHHHHHHHHhcCCCHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCccCCCCCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccH
Q 014288 155 VMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQF 234 (427)
Q Consensus 155 ~~~el~g~~~g~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~ 234 (427)
+|+|++|+.++.++|++|++|+++ .++.+++|+||+++|+|+|+|+|.+++ +++++|||++|||++++|.+
T Consensus 109 i~~e~~g~~~g~~~g~gg~~H~~~--~~~~~~~g~~G~~lp~A~G~A~A~~~~-------~~~~~vv~~~GDGa~~~G~~ 179 (365)
T 2ozl_A 109 ILAELTGRKGGCAKGKGGSMHMYA--KNFYGGNGIVGAQVPLGAGIALACKYN-------GKDEVCLTLYGDGAANQGQI 179 (365)
T ss_dssp HHHHHTTCTTSTTTTSSCTTCCCB--TTBCCCCCSTTTHHHHHHHHHHHHHHH-------TCCCCEEEEEETTGGGCHHH
T ss_pred HHHHHcCCCCCCCCCCCCCCCcCc--cccCCCcchhhhhhHHHHHHHHHHHhc-------CCCceEEEEECchhhhccHH
Confidence 999999999999999999999965 478888899999999999999999887 47899999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEE
Q 014288 235 FECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLV 314 (427)
Q Consensus 235 ~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lI 314 (427)
+|+||+|+.|+||+||||+||+|+++++...+...+++.+ ++||+++++|||+|+++|++++++|++++++++||+||
T Consensus 180 ~Ealn~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~--ra~g~p~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lI 257 (365)
T 2ozl_A 180 FEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYK--RGDFIPGLRVDGMDILCVREATRFAAAYCRSGKGPILM 257 (365)
T ss_dssp HHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGG--TTTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHH--HhCCCCEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 9999999999999999999999999997666656677776 68999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCCCCC-CCCCHHHHHHHhc-CChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCChh
Q 014288 315 ECETYRFRGHSLADPD-ELRDPAEKARYAA-RDPITALKKYLIESSLASEAELKAIEKKIDEVVEDAVEFADESAPPPRS 392 (427)
Q Consensus 315 e~~t~R~~gHs~~D~~-~yR~~~e~~~~~~-~DPi~~~~~~L~~~g~~t~ee~~~i~~e~~~~v~~a~~~A~~~p~p~~~ 392 (427)
|++|||..||+++|++ .||+++|++.|++ +||+.+|+++|+++|+++++++++++++++++|++++++|+++|.|+++
T Consensus 258 e~~t~R~~gHs~~D~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~ 337 (365)
T 2ozl_A 258 ELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLE 337 (365)
T ss_dssp EEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCCCGG
T ss_pred EEEeecCCCCCCCCCCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 9999999999999976 6999999999985 7999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCC
Q 014288 393 QLLENVFADPKGF 405 (427)
Q Consensus 393 ~~~~~vya~~~~~ 405 (427)
++|+|||++++..
T Consensus 338 ~~~~~vy~~~~~~ 350 (365)
T 2ozl_A 338 ELGYHIYSSDPPF 350 (365)
T ss_dssp GTTCSSSSSCCCE
T ss_pred HHHhhhcCCCChh
Confidence 9999999987663
No 2
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=2.9e-71 Score=568.02 Aligned_cols=352 Identities=25% Similarity=0.394 Sum_probs=313.1
Q ss_pred ccceeeeccCCCCCCcccccccccchh-hhhc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChH
Q 014288 43 TRKLRVNSVHSNQGNVRRRLPVVAVSE-VVKE--KKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQE 119 (427)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqE 119 (427)
+++|.|++|...+.+|.+|+ ++..+ ++.+ .+.+++++++++|+.|+++|.||+++.+++++|++ +|+|++.|||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~e~~~~~y~~M~~~r~fe~~~~~~~~~gri-~~~~~~~GqE 93 (400)
T 2bfd_A 17 IDKLEFIQPNVISGIPIYRV--MDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRI-SFYMTNYGEE 93 (400)
T ss_dssp CSSCCCCCCCCSSCSCEECS--BCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SCCCCCTTCH
T ss_pred ccceeeccCcccCCCCeeEE--ECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ceeecCCChH
Confidence 57999999998888999999 66666 4433 36899999999999999999999999999999998 4899999999
Q ss_pred HHHHHHHHhcCCCCEEEcCCcchHHHHhcCCCHHHHHHHHhcccCCCccCCCCCCccccccCcccCCccCCCcchHHHHH
Q 014288 120 AVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATG 199 (427)
Q Consensus 120 a~~vg~~~~L~~~D~v~~~yR~~~~~La~g~~~~~~~~el~g~~~g~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvG 199 (427)
|+++|++.+|+++|+|+++||+|++++.+|+++.++|.+++|+.+++++|+++++|++..+.++.+.+|+||+++|+|+|
T Consensus 94 a~~vg~~~al~~~D~v~~~yR~~~~~~~~G~~~~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG 173 (400)
T 2bfd_A 94 GTHVGSAAALDNTDLVFGQAREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVG 173 (400)
T ss_dssp HHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEecCcCHHHHHHcCCCHHHHHHHhcCCCCCCCCCCCCCcCCcccccCccccCccccccccHHHH
Confidence 99999999999999999999999999999999999999999999998889999999998888888889999999999999
Q ss_pred HHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccC
Q 014288 200 AAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAF 279 (427)
Q Consensus 200 aA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~ 279 (427)
+|+|.+++ +.+++|||++|||++++|.+||+||+|++|+||+||||+||+|+++++...+.+.+++++++++|
T Consensus 174 ~AlA~~~~-------~~~~~vv~~~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~ 246 (400)
T 2bfd_A 174 AAYAAKRA-------NANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY 246 (400)
T ss_dssp HHHHHHHH-------TCCCCEEEEEETTGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGG
T ss_pred HHHhhhhh-------CCCCeEEEEECchhhhcChHHHHHHHHHHHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHc
Confidence 99999887 46889999999999999999999999999999999999999999999887777778999999999
Q ss_pred CCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCC-CCCCCHHHHHHHhcC-ChHHHHHHHHHHc
Q 014288 280 GMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP-DELRDPAEKARYAAR-DPITALKKYLIES 357 (427)
Q Consensus 280 G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~-~~yR~~~e~~~~~~~-DPi~~~~~~L~~~ 357 (427)
||++++|||+|+++|++++++|++++|++++|+|||++|||..||+++|+ ..||+++|++.|+++ |||.+|+++|++.
T Consensus 247 G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~tyR~~gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~ 326 (400)
T 2bfd_A 247 GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQ 326 (400)
T ss_dssp TCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECCCCC--CC-------------------CCHHHHHHHHHTTT
T ss_pred CCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeeeeCCCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999986 569999999999987 7999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhhCCCCChhhhhhccccCCCC
Q 014288 358 SLASEAELKAIEKKIDEVVEDAVEFADESAPPPRSQLLENVFADPKG 404 (427)
Q Consensus 358 g~~t~ee~~~i~~e~~~~v~~a~~~A~~~p~p~~~~~~~~vya~~~~ 404 (427)
|++++++++++++++.++|++++++|++.|.|+++++|++||+++++
T Consensus 327 g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~~~~~ 373 (400)
T 2bfd_A 327 GWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPA 373 (400)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTTSSSSCCH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCH
Confidence 99999999999999999999999999999999999999999998754
No 3
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=1.5e-71 Score=570.51 Aligned_cols=338 Identities=25% Similarity=0.352 Sum_probs=315.4
Q ss_pred Ccccccccccchh-hhh-ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcCCCCE
Q 014288 57 NVRRRLPVVAVSE-VVK-EKKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDS 134 (427)
Q Consensus 57 ~~~~~~~~~~~~~-~~~-~~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~~~D~ 134 (427)
.|.+|+ ++..+ ++. ..+.+++|+++++|+.|+++|.||+++..+|++|++ +|+|++.||||+++|++.+|+++|+
T Consensus 51 ~~~~~~--ld~~g~~~~~~~~~~~~e~~~~~y~~M~~~R~fe~~~~~~~~qgr~-~~~~~~~GqEA~~vg~~~al~~~D~ 127 (407)
T 1qs0_A 51 YSLVRV--LDEQGDAQGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKM-SFYMQSLGEEAIGSGQALALNRTDM 127 (407)
T ss_dssp TSCBCC--BCTTSCBCSGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SCCCCCTTTHHHHHHHHHHSCTTSE
T ss_pred CCeEEE--ECCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-ccCcCCCChHHHHHHHHHhcCCCCE
Confidence 456776 55544 332 236899999999999999999999999999999998 5999999999999999999999999
Q ss_pred EEcCCcchHHHHhcCCCHHHHHHHHhcccCCCccCCCCCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhc
Q 014288 135 VVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEA 214 (427)
Q Consensus 135 v~~~yR~~~~~La~g~~~~~~~~el~g~~~g~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~ 214 (427)
|+++||+|++.|++|+++.++|++++|+.++.++|+++++|++..+.++.+.+|+||+++|+|+|+|+|.|++
T Consensus 128 v~~~yR~~~~~l~~g~~~~~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~------- 200 (407)
T 1qs0_A 128 CFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIK------- 200 (407)
T ss_dssp EECCSSCHHHHHHTTCCHHHHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHT-------
T ss_pred EEecccchHHHHhcCCCHHHHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHh-------
Confidence 9999999999999999999999999999988889999999999888899999999999999999999999887
Q ss_pred CCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccc-cCchhhcccccCCCcEEEEeCCCHHH
Q 014288 215 DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT-SDPQIYKKGPAFGMPGFHVDGMDVLK 293 (427)
Q Consensus 215 ~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~-~~~d~~~~a~a~G~~~~~Vdg~D~~a 293 (427)
+++++|||++|||++++|.++|+||+|++|+||+||||+||+|+++++...+. ..+++++++++||+++++|||+|+++
T Consensus 201 ~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~a 280 (407)
T 1qs0_A 201 GDTKIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVA 280 (407)
T ss_dssp TCCCCEEEEEETGGGGSHHHHHHHHHHHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHH
T ss_pred CCCCEEEEEECCchhhcChHHHHHHHHHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHH
Confidence 57899999999999999999999999999999999999999999999877655 56899999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCC-CCCCCCHHHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 014288 294 VREVAKEAIERARRGEGPTLVECETYRFRGHSLAD-PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKKI 372 (427)
Q Consensus 294 v~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D-~~~yR~~~e~~~~~~~DPi~~~~~~L~~~g~~t~ee~~~i~~e~ 372 (427)
|++++++|++++|++++|+|||++|||..||+++| +..||+++|++.|+++|||.+|+++|+++|++|+++++++++++
T Consensus 281 v~~a~~~A~~~ar~~~gP~lIe~~t~R~~Ghs~~Dd~~~Yr~~~e~~~~~~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~ 360 (407)
T 1qs0_A 281 VYAASRWAAERARRGLGPSLIEWVTYRAGPHSTSDDPSKYRPADDWSHFPLGDPIARLKQHLIKIGHWSEEEHQATTAEF 360 (407)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEEECCCCSCSSTTCCGGGTSCTTHHHHCTTCCHHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEEeeccCCcCCCCCccccCCHHHHHHHhcCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 56799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh------CCCCChhhhhhccccCCCC
Q 014288 373 DEVVEDAVEFADE------SAPPPRSQLLENVFADPKG 404 (427)
Q Consensus 373 ~~~v~~a~~~A~~------~p~p~~~~~~~~vya~~~~ 404 (427)
+++|++++++|++ +|.|+++++|+|||+++++
T Consensus 361 ~~~v~~a~~~a~~~~~~~~~p~p~~~~~~~~vy~~~~~ 398 (407)
T 1qs0_A 361 EAAVIAAQKEAEQYGTLANGHIPSAASMFEDVYKEMPD 398 (407)
T ss_dssp HHHHHHHHHHHHTTCCSSSCCCCCSSGGGSSSSSSCCH
T ss_pred HHHHHHHHHHHHhcccccCCCCCCHHHHHhhccCCCCH
Confidence 9999999999998 5899999999999998764
No 4
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=2.8e-70 Score=555.10 Aligned_cols=329 Identities=30% Similarity=0.447 Sum_probs=303.8
Q ss_pred Ccccccccccchh-hhhc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcCCCC
Q 014288 57 NVRRRLPVVAVSE-VVKE--KKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKED 133 (427)
Q Consensus 57 ~~~~~~~~~~~~~-~~~~--~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~~~D 133 (427)
+|.+|+ ++..+ ++.+ .+.+++++++++|+.|+++|.||+++.+++++|++ ||+|++.|||++++|++.+|+++|
T Consensus 20 ~~~~~~--l~~~g~~~~~~~~~~l~~e~l~~~y~~M~~~R~fe~~~~~~~~qgr~-g~~~~~~G~Ea~~vg~~~~l~~~D 96 (368)
T 1w85_A 20 FPTFQI--LNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKED 96 (368)
T ss_dssp CCEECS--BCTTSCBSCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCCTTCHHHHHHHHHTCCTTC
T ss_pred CCeeEE--ECCCCCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCCHHHHHHHHHHhcCCcC
Confidence 678888 56665 4432 36799999999999999999999999999999998 999999999999999999999999
Q ss_pred EEEcCCcchHHHHhcCCCHHHHHHHHhcccCCCccCCCCCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhh
Q 014288 134 SVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKE 213 (427)
Q Consensus 134 ~v~~~yR~~~~~La~g~~~~~~~~el~g~~~g~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~ 213 (427)
+++++||+|++++++|+++..+|.+++|+.+ |+++| .+.++.+++|+||+++|+|+|+|+|.+++
T Consensus 97 ~v~~~~R~~~~~~~~G~~~~~~~~el~G~~~------G~~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~------ 161 (368)
T 1w85_A 97 FILPGYRDVPQIIWHGLPLYQAFLFSRGHFH------GNQIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMR------ 161 (368)
T ss_dssp EEECCSSCHHHHHHTTCCHHHHHHHHHTCGG------GGCCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHT------
T ss_pred EEEecchhHHHHHhcCCCHHHHHHHHCCCCC------CCCCC---cccccCCCccccCccccHHHHHHHHhHhh------
Confidence 9999999999999999999999999999865 34566 46788889999999999999999998877
Q ss_pred cCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCHHH
Q 014288 214 ADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLK 293 (427)
Q Consensus 214 ~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~a 293 (427)
+++++|||++|||++++|.++|+||+|++|+||+||||+||+|+++++...+.+.+++++++++||+++++|||+|+++
T Consensus 162 -~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~a 240 (368)
T 1w85_A 162 -GKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLA 240 (368)
T ss_dssp -TCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHH
T ss_pred -CCCCeEEEEEchhhhhhcHHHHHHHHHHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHH
Confidence 5789999999999999999999999999999999999999999999988777777899999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCCEEEEEEEecCCCCC-CCC-CCCCCCHHHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHHH
Q 014288 294 VREVAKEAIERARRGEGPTLVECETYRFRGHS-LAD-PDELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEKK 371 (427)
Q Consensus 294 v~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs-~~D-~~~yR~~~e~~~~~~~DPi~~~~~~L~~~g~~t~ee~~~i~~e 371 (427)
|++++++|++++|++++|+|||++|||..||+ ++| +..||+++|++.|+++|||.+|+++|+++|++|++++++++++
T Consensus 241 v~~a~~~A~~~~r~~~gP~lIe~~t~r~~gHs~~~Ddp~~yr~~~e~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~~ 320 (368)
T 1w85_A 241 VYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKELENEWAKKDPLVRFRKFLEAKGLWSEEEENNVIEQ 320 (368)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEEECCCSSCSCSSCC------CHHHHHHHHTTCHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEEeeccCCCCCCCCCccccCCHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999 988 5679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCChhhhhhccccCCCC
Q 014288 372 IDEVVEDAVEFADESAPPPRSQLLENVFADPKG 404 (427)
Q Consensus 372 ~~~~v~~a~~~A~~~p~p~~~~~~~~vya~~~~ 404 (427)
++++|++++++|+++|.|+++++|+|||+++++
T Consensus 321 ~~~~v~~a~~~a~~~p~p~~~~~~~~vy~~~~~ 353 (368)
T 1w85_A 321 AKEEIKEAIKKADETPKQKVTDLISIMFEELPF 353 (368)
T ss_dssp HHHHHHHHHHHHHTSCCCCHHHHHHTSCSSCCH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHhhccCCCCh
Confidence 999999999999999999999999999998764
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=1.6e-66 Score=527.92 Aligned_cols=340 Identities=32% Similarity=0.502 Sum_probs=318.6
Q ss_pred CCCcccccccccchh-hhhc-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcCCC
Q 014288 55 QGNVRRRLPVVAVSE-VVKE-KKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKE 132 (427)
Q Consensus 55 ~~~~~~~~~~~~~~~-~~~~-~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~~~ 132 (427)
..+|.+|+ ++..+ ++++ .+.+++++++++|+.|+++|.||+++..++++|++ |+++++.|||++++++..+|+++
T Consensus 11 ~~~~~~~~--l~~~g~~~~~~~~~l~~~~l~~l~~~m~~~R~~~~~~~~~~~~G~~-g~~~~~~G~ea~~~~~~~~l~~~ 87 (367)
T 1umd_A 11 FTEEPIRL--IGEEGEWLGDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPG 87 (367)
T ss_dssp SCSSCBCC--BCTTSCBCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-SCCCCCTTCHHHHHHHHHHSCTT
T ss_pred CCCCeEEE--ECCCCCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-cCCCCCcCHHHHHHHHHHHcCCC
Confidence 34678888 66665 3332 36799999999999999999999999999999998 89999999999999999999998
Q ss_pred -CEEEcCCcchHHHHhcCCCHHHHHHHHhcccCCCccCCCCCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhh
Q 014288 133 -DSVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVL 211 (427)
Q Consensus 133 -D~v~~~yR~~~~~La~g~~~~~~~~el~g~~~g~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~ 211 (427)
|+++++||+|++.+.+|+++.++|.+++++.++++.|.++++|++.++.++.+.+|++|.++|.|+|+|+|.|+.
T Consensus 88 rD~i~~s~r~~~~~~~~G~~~~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~---- 163 (367)
T 1umd_A 88 FDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLL---- 163 (367)
T ss_dssp TSEEECCTTTHHHHHHHTCCHHHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHT----
T ss_pred CcEEEeCcHHHHHHHHcCCCHHHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHh----
Confidence 999999999999999999999999999999999888888899998888888889999999999999999999887
Q ss_pred hhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCH
Q 014288 212 KEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDV 291 (427)
Q Consensus 212 ~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~ 291 (427)
+++++|||++|||++++|.++|+|++|++|++|+||||+||+|+++++...+.+.+++.+++++||+++++|||+|+
T Consensus 164 ---~~~~~vv~i~GDGa~~~G~~~Eal~~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~ 240 (367)
T 1umd_A 164 ---RTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDV 240 (367)
T ss_dssp ---TCCCCEEEEEETGGGGSHHHHHHHHHHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCH
T ss_pred ---CCCCeEEEEEcccccccCcHHHHHHHHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCH
Confidence 57889999999999999999999999999999999999999999998876666678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCC-CCCCCHHHHHHHhcCChHHHHHHHHHHcCCCCHHHHHHHHH
Q 014288 292 LKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP-DELRDPAEKARYAARDPITALKKYLIESSLASEAELKAIEK 370 (427)
Q Consensus 292 ~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~-~~yR~~~e~~~~~~~DPi~~~~~~L~~~g~~t~ee~~~i~~ 370 (427)
.+|++++++|+++++++++|+|||++|||..||+++|+ ..||+++|++.|+++|||.+|+++|+++|++|+++++++++
T Consensus 241 ~av~~a~~~A~~~a~~~~gP~lIe~~t~r~~Ghs~~D~~~~Yr~~~e~~~~~~~dPi~~~~~~L~~~g~~~~~~~~~i~~ 320 (367)
T 1umd_A 241 LASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRKKDPIPRFRRFLEARGLWNEEWEEDVRE 320 (367)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEECCCCSCSSTTCCGGGTSCHHHHHHHHTTCHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEEeecCCCCCCCCCccccCCHHHHHHHHcCCHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999985 57999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhCCCCChhhhhhccccCCCC
Q 014288 371 KIDEVVEDAVEFADESAPPPRSQLLENVFADPKG 404 (427)
Q Consensus 371 e~~~~v~~a~~~A~~~p~p~~~~~~~~vya~~~~ 404 (427)
+++++|++++++|+++|.|+++++|+|||+++++
T Consensus 321 ~~~~~v~~a~~~a~~~~~p~~~~~~~~vy~~~~~ 354 (367)
T 1umd_A 321 EIRAELERGLKEAEEAGPVPPEWMFEDVFAEKPW 354 (367)
T ss_dssp HHHHHHHHHHHHHHHTCBCCGGGGGTTSSSSCCH
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHhhhcCCCCh
Confidence 9999999999999999999999999999998764
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=4.3e-56 Score=491.06 Aligned_cols=307 Identities=21% Similarity=0.232 Sum_probs=269.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcC------CCCEEEc-CCcchHHHHh
Q 014288 75 KLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK------KEDSVVS-TYRDHVHALS 147 (427)
Q Consensus 75 ~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~------~~D~v~~-~yR~~~~~La 147 (427)
+.+++|+++++|+.|+++|.||+++..+|++||++|+ .|||++++|+..+|+ ++|++++ +||+|+++|+
T Consensus 113 ~~~s~e~~~~~y~~m~~~R~fE~~l~~~~~~~k~~g~----~G~Ea~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La 188 (868)
T 2yic_A 113 DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLA 188 (868)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHH
Confidence 5789999999999999999999999999999999886 999999999997755 7999997 8999999999
Q ss_pred --cCCCHHHHHHHHhcccCCC-ccC-CCCCCcccccc------------CcccCCccCCCcchHHHHHHHHHHHHHhhhh
Q 014288 148 --KGVPARAVMSELFGKATGC-CRG-QGGSMHMFSKE------------HNLLGGFAFIGEGIPVATGAAFTSKYRREVL 211 (427)
Q Consensus 148 --~g~~~~~~~~el~g~~~g~-~~G-~ggs~H~~~~~------------~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~ 211 (427)
+|+++.++|+|++|+.++. +.| ++.++|++... .++.+.+++||+++|+|+|+|+|.|+++...
T Consensus 189 n~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~P~A~G~A~A~k~~~~~~ 268 (868)
T 2yic_A 189 NIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTG 268 (868)
T ss_dssp HTTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHHTCS
T ss_pred HHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHhhccCC
Confidence 9999999999999998876 434 33478876432 3455678999999999999999999874211
Q ss_pred hh---cCCCceEEEEeCCCcc-cCccHHHHHHHHHHcCCC---eEEEEEcCCccccccccccccCchhhcccccCCCcEE
Q 014288 212 KE---ADCDHVTLAFFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGF 284 (427)
Q Consensus 212 ~~---~~~~~~vv~~~GDGa~-~~G~~~EaLn~A~~~~LP---vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~ 284 (427)
+. ...+.+|||++|||++ ++|.|||+||+|+.|+|| +||||+||+|+++++...+++.+++.+++++|||+++
T Consensus 269 ~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~ 348 (868)
T 2yic_A 269 EEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIF 348 (868)
T ss_dssp TTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEE
T ss_pred cccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEEcCCcccccCccccccccCHHHHHHhCCCcEE
Confidence 00 0156799999999995 899999999999999999 9999999999999986656666788999999999999
Q ss_pred EEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCCCCCCCHHHHHHHh-cCChHHHHHHHHHHcCCCCHH
Q 014288 285 HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYA-ARDPITALKKYLIESSLASEA 363 (427)
Q Consensus 285 ~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~~~yR~~~e~~~~~-~~DPi~~~~~~L~~~g~~t~e 363 (427)
+|||+|+++|++++++|++++|++++|+|||++|||++||+++|++.||.+.|++.|+ .+||+.+|+++|+++|+++++
T Consensus 349 ~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~~~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~e 428 (868)
T 2yic_A 349 HVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMK 428 (868)
T ss_dssp EEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHH
T ss_pred EEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccccCChHHHHHHHhCCCHHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999887 469999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 014288 364 ELKAIEKKIDEVVEDAVEFADE 385 (427)
Q Consensus 364 e~~~i~~e~~~~v~~a~~~A~~ 385 (427)
++++++++++++|++++++|++
T Consensus 429 e~~~i~~e~~~~v~~a~~~a~~ 450 (868)
T 2yic_A 429 EAEDALRDYQGQLERVFNEVRE 450 (868)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999887
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.3e-55 Score=493.60 Aligned_cols=307 Identities=21% Similarity=0.230 Sum_probs=268.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhc------CCCCEEEc-CCcchHHHHh
Q 014288 75 KLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLL------KKEDSVVS-TYRDHVHALS 147 (427)
Q Consensus 75 ~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L------~~~D~v~~-~yR~~~~~La 147 (427)
+.+++|+++++|+.|+++|.||+++..+|++||++|+ .|||++++|+..+| +++|++++ +||+|+++|+
T Consensus 358 ~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~~k~~g~----~GqEa~~~g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La 433 (1113)
T 2xt6_A 358 DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIPMMDAVIDQCAEHGLDEVVIAMPHRGRLNVLA 433 (1113)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHHHHHHHHHHHHHTTCSEEEEECCSTTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHHHHHHHHHHhhhCCCCCEEEeccccchHHHHH
Confidence 6789999999999999999999999999999999886 99999999998885 47999997 8999999999
Q ss_pred --cCCCHHHHHHHHhcccCCC-ccC-CCCCCcccccc------------CcccCCccCCCcchHHHHHHHHHHHHHhhhh
Q 014288 148 --KGVPARAVMSELFGKATGC-CRG-QGGSMHMFSKE------------HNLLGGFAFIGEGIPVATGAAFTSKYRREVL 211 (427)
Q Consensus 148 --~g~~~~~~~~el~g~~~g~-~~G-~ggs~H~~~~~------------~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~ 211 (427)
+|+++.++|+|++|+.++. +.| ++.++|++... .++.+.+++||+++|+|+|+|+|.|+++...
T Consensus 434 ~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~l~l~~n~s~Lg~~~p~A~G~A~A~k~~~~~~ 513 (1113)
T 2xt6_A 434 NIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIEVSLTANPSHLEAVDPVLEGLVRAKQDLLDTG 513 (1113)
T ss_dssp HTTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEEEEECCCCSSTTTTHHHHHHHHHHHHHHTTBS
T ss_pred HHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCcceeeeecCCCccccccccHHHHHHHHHHHhcccc
Confidence 9999999999999998876 444 33378876432 3455678999999999999999999875211
Q ss_pred hh---cCCCceEEEEeCCCcc-cCccHHHHHHHHHHcCCC---eEEEEEcCCccccccccccccCchhhcccccCCCcEE
Q 014288 212 KE---ADCDHVTLAFFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGF 284 (427)
Q Consensus 212 ~~---~~~~~~vv~~~GDGa~-~~G~~~EaLn~A~~~~LP---vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~ 284 (427)
+. ...+.++||++|||++ ++|.|||+||+|+.|+|| +||||+||+|+++++...+++..++.+++++|||+++
T Consensus 514 ~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~NN~~gist~~~~~~s~~~~~~~a~a~G~p~~ 593 (1113)
T 2xt6_A 514 EEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVVNNQIGFTTAPTDSRSSEYCTDVAKMIGAPIF 593 (1113)
T ss_dssp TTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEEECSCBTTBCHHHHCSSSSTTGGGGGGTCCEE
T ss_pred CccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEEeCCcccccCccccccccCHHHHHHhcCCcEE
Confidence 10 0156899999999995 899999999999999999 9999999999999986655556678899999999999
Q ss_pred EEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCCCCCCCHHHHHHHh-cCChHHHHHHHHHHcCCCCHH
Q 014288 285 HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYA-ARDPITALKKYLIESSLASEA 363 (427)
Q Consensus 285 ~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~~~yR~~~e~~~~~-~~DPi~~~~~~L~~~g~~t~e 363 (427)
+|||+|+++|++++++|++++|++++|+|||++|||++|||++|++.||.+.|++.|+ .+||+.+|+++|+++|++|++
T Consensus 594 ~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~~~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~e 673 (1113)
T 2xt6_A 594 HVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPSMTQPYMYDVIDTKRGSRKAYTEALIGRGDISMK 673 (1113)
T ss_dssp EEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGGGTCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHH
T ss_pred EEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccccCChHHHHHHHhcCCHHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999998887 469999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 014288 364 ELKAIEKKIDEVVEDAVEFADE 385 (427)
Q Consensus 364 e~~~i~~e~~~~v~~a~~~A~~ 385 (427)
++++++++++++|++++++|++
T Consensus 674 e~~~i~~e~~~~v~~a~~~a~~ 695 (1113)
T 2xt6_A 674 EAEDALRDYQGQLERVFNEVRE 695 (1113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999987
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1.9e-54 Score=480.37 Aligned_cols=306 Identities=18% Similarity=0.211 Sum_probs=251.9
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcC------CCCEEEc-CCcchHHHH
Q 014288 74 KKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK------KEDSVVS-TYRDHVHAL 146 (427)
Q Consensus 74 ~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~------~~D~v~~-~yR~~~~~L 146 (427)
.+.+++|+++++|+.|+++|.||+++..+|++||++| +.|||++++|+..+++ .+|+|++ +||+|+++|
T Consensus 192 ~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkrf~----~~G~Ea~i~g~~~~~~~a~~~g~~D~v~g~~hRg~~~~L 267 (933)
T 2jgd_A 192 RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFS----LEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVL 267 (933)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCC----CTTCTTHHHHHHHHHHHHHTTTCCEEEEECCSTTHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----CCCchHHHHHHHHHHHHHhhCCCCCEEecCCCcCHHHHH
Confidence 3679999999999999999999999999999999876 3899999999888876 5999996 899999999
Q ss_pred h--cCCCHHHHHHHHhcccCCCccCCCCCCccccccC----------cccCCccCCCcchHHHHHHHHHHHHHhhhhhhc
Q 014288 147 S--KGVPARAVMSELFGKATGCCRGQGGSMHMFSKEH----------NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEA 214 (427)
Q Consensus 147 a--~g~~~~~~~~el~g~~~g~~~G~ggs~H~~~~~~----------~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~ 214 (427)
+ +|+++.++|+|++|+.++.+.+++.++|++.... ++....+++|+++|+|+|+|+|.|+++... .
T Consensus 268 an~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~~~~shlg~~~p~A~G~A~A~~~~~~~~--~ 345 (933)
T 2jgd_A 268 VNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEP--S 345 (933)
T ss_dssp HHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEECCCCSSTTCHHHHHHHHHHHHHTTSSSC--C
T ss_pred HHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeecccCcccccccCHHHHHHHHHHhhcccc--C
Confidence 9 9999999999999998887655556789875432 234678999999999999999988763100 0
Q ss_pred CCCceEEEEeCCCcc-cCccHHHHHHHHHHcCCC---eEEEEEcCCccccc-cccccccCchhhcccccCCCcEEEEeCC
Q 014288 215 DCDHVTLAFFGDGTC-NNGQFFECLNMAALWKLP---IVFVVENNLWAIGM-SHLRATSDPQIYKKGPAFGMPGFHVDGM 289 (427)
Q Consensus 215 ~~~~~vv~~~GDGa~-~~G~~~EaLn~A~~~~LP---vi~VV~NN~y~is~-~~~~~~~~~d~~~~a~a~G~~~~~Vdg~ 289 (427)
+.+.+|||++|||++ ++|.++|+||+|+.|++| +||||+||+|+|++ +...+....++++++++||+++++|||+
T Consensus 346 ~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~~~~~~~~~~~~~~~a~a~g~p~~~VdG~ 425 (933)
T 2jgd_A 346 SNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNAD 425 (933)
T ss_dssp GGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC---------------CGGGGGGTTTCCEEEEETT
T ss_pred CCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCCCHHhcccchhHHHHHHHcCCCEEEECCC
Confidence 246799999999998 999999999999999999 99999999999999 8877777788999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCCCCCCCHHHHHHHhc-CChHHHHHHHHHHcCCCCHHHHHHH
Q 014288 290 DVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKARYAA-RDPITALKKYLIESSLASEAELKAI 368 (427)
Q Consensus 290 D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~~~yR~~~e~~~~~~-~DPi~~~~~~L~~~g~~t~ee~~~i 368 (427)
|+++|++++++|+++++++++|+|||++|||..||+++|++.||+++|++.|++ +||+.+|+++|+++|++|+++++++
T Consensus 426 D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~~yr~~~e~~~~~~~~dPi~~~~~~Li~~Gv~t~~~~~~i 505 (933)
T 2jgd_A 426 DPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEM 505 (933)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC-----------CCTTHHHHHTSCCHHHHHHHHHHTTTSSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccchhhCCHHHHHHHHccCCHHHHHHHHHHHcCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 4999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 014288 369 EKKIDEVVEDAVEFADE 385 (427)
Q Consensus 369 ~~e~~~~v~~a~~~A~~ 385 (427)
+++++++|+++++.|++
T Consensus 506 ~~~~~~~v~~a~~~A~~ 522 (933)
T 2jgd_A 506 VNLYRDALDAGDCVVAE 522 (933)
T ss_dssp HHHHHHHHHHTSCCCTT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999887
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.97 E-value=4.3e-30 Score=276.78 Aligned_cols=233 Identities=19% Similarity=0.235 Sum_probs=172.5
Q ss_pred ccchhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcC-CCCEEE--cCCcc
Q 014288 65 VAVSEVVKEKKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK-KEDSVV--STYRD 141 (427)
Q Consensus 65 ~~~~~~~~~~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~-~~D~v~--~~yR~ 141 (427)
++...--.+.++++.+++.++|+.| |.+.. ++. ++..|+++++.|++++.+++..+++ +.|+++ ..||+
T Consensus 11 l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~~---~~~--~~~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~~ 82 (621)
T 2o1s_A 11 LALVDSTQELRLLPKESLPKLCDEL---RRYLL---DSV--SRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQA 82 (621)
T ss_dssp GGGCSSHHHHTTSCGGGHHHHHHHH---HHHHH---HHS--CGGGCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTTC
T ss_pred hhhcCChHHhhhCCHHHHHHHHHHH---HHHHH---HHH--hhcCCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchHH
Confidence 5555544455678999999999997 54432 222 2457999999999999999999999 899988 68999
Q ss_pred hHHHHhcCCCHHHHHHHHhcccCCCccCCCCCCccccc---cCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCc
Q 014288 142 HVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSK---EHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDH 218 (427)
Q Consensus 142 ~~~~La~g~~~~~~~~el~g~~~g~~~G~ggs~H~~~~---~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~ 218 (427)
+++.+.+|. .+++ .. .+..+|..++..+ +.. ...+|+||+++|+|+|+|+|.+++ ++++
T Consensus 83 y~~~~l~G~-~~~~-~~--------~r~~~g~~g~~~~~~s~~~-~~~~G~~G~gl~~A~G~AlA~~~~-------~~~~ 144 (621)
T 2o1s_A 83 YPHKILTGR-RDKI-GT--------IRQKGGLHPFPWRGESEYD-VLSVGHSSTSISAGIGIAVAAEKE-------GKNR 144 (621)
T ss_dssp HHHHHTTTT-GGGG-GG--------TTSTTSCCSSCCTTTCTTC-CSCCSSSSCHHHHHHHHHHHHHHH-------TSCC
T ss_pred HHHHHHhCC-Hhhh-hc--------ccccCCCCCCCCCCCCCCC-ccCCcccchHHHHHHHHHHHHHHh-------CCCC
Confidence 999999887 2211 11 1111221111111 223 335899999999999999999887 5789
Q ss_pred eEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccC-----------------------------
Q 014288 219 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSD----------------------------- 269 (427)
Q Consensus 219 ~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~----------------------------- 269 (427)
+|||++|||++++|+++|+||+|+++++|+|+||+||+|+++.+.+.+...
T Consensus 145 ~Vv~v~GDG~~~~G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~ 224 (621)
T 2o1s_A 145 RTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKE 224 (621)
T ss_dssp CEEEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEECC------------------------------------------
T ss_pred eEEEEEchhhhhccHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHH
Confidence 999999999999999999999999999999999999999998765432110
Q ss_pred -----chh-------hcccccCCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCC
Q 014288 270 -----PQI-------YKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLA 327 (427)
Q Consensus 270 -----~d~-------~~~a~a~G~~~~-~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~ 327 (427)
.++ ..++++|||+++ +|||+|+.++.+++++| ++.++|+|||++|+|++||+..
T Consensus 225 ~~~r~~~~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A----~~~~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 225 LLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNM----RDLKGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp --------------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHH----HHSCSEEEEEEECCCTTCCCCC
T ss_pred HHHHHHHHhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHH----HHcCCCEEEEEEEecccCCChh
Confidence 011 467899999999 99999999988876665 4568999999999999999855
No 10
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.96 E-value=7.8e-30 Score=275.15 Aligned_cols=237 Identities=18% Similarity=0.162 Sum_probs=182.6
Q ss_pred ccccccchhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcC-CCCEEEcCC
Q 014288 61 RLPVVAVSEVVKEKKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLK-KEDSVVSTY 139 (427)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~-~~D~v~~~y 139 (427)
.++++++...-.+.+.++.+++.++|+.| |.+. .+++. +..||++++.|+-.+.+++...++ +.|+++.+
T Consensus 9 ~~~~l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~---~~~~~--~~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~- 79 (629)
T 2o1x_A 9 DTPLLDQIHGPKDLKRLSREQLPALTEEL---RGEI---VRVCS--RGGLHLASSLGAVDIITALHYVLDSPRDRILFD- 79 (629)
T ss_dssp SCTTGGGCSSHHHHTTSCGGGHHHHHHHH---HHHH---HHHHT--TSSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-
T ss_pred CCchhhhCCChhhhhhCCHHHHHHHHHHH---HHHH---HHHHH--hcCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-
Confidence 34567777766667789999999999998 5432 23333 357999999999777777777778 89999988
Q ss_pred cchH---HHHhcCC-CHHHHHHHHhcccCCCccCCCCCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC
Q 014288 140 RDHV---HALSKGV-PARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 215 (427)
Q Consensus 140 R~~~---~~La~g~-~~~~~~~el~g~~~g~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~ 215 (427)
|+|+ +.+..|. +....++++.|. +|++.+.. ++ +...++|+||+++|+|+|+|+|.|++ +
T Consensus 80 ~GH~~y~~~~l~G~~~~~~~~r~~~g~-~G~p~~~~-s~-------~~~~~~G~~G~gl~~AvG~AlA~k~~-------~ 143 (629)
T 2o1x_A 80 VGHQAYAHKILTGRRDQMADIKKEGGI-SGFTKVSE-SE-------HDAITVGHASTSLTNALGMALARDAQ-------G 143 (629)
T ss_dssp SSTTCHHHHHTTTTGGGGGGTTSTTSC-CSSCCGGG-CT-------TCCSCCSSSSCHHHHHHHHHHHHHHH-------T
T ss_pred CchHHHHHHHHhCcHhHHhCcccCCCC-CCCCCCCC-CC-------CCCcCCCcccccHhHHHHHHHHHHHh-------C
Confidence 8886 5666675 333345555553 34433221 22 23557899999999999999999887 5
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccccccccccc--------------------------C
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATS--------------------------D 269 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~--------------------------~ 269 (427)
++++|||++|||++++|+++|+||+|+++++|+|+||+||+|+++.+...+.. .
T Consensus 144 ~~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~ 223 (629)
T 2o1x_A 144 KDFHVAAVIGDGSLTGGMALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSK 223 (629)
T ss_dssp CCCCEEEEEETTGGGSHHHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC-------------------------
T ss_pred CCCeEEEEEchhhhhccHHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccch
Confidence 78999999999999999999999999999999999999999999876542110 0
Q ss_pred ---------chh-------h--cccccCCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCC
Q 014288 270 ---------PQI-------Y--KKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL 326 (427)
Q Consensus 270 ---------~d~-------~--~~a~a~G~~~~-~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~ 326 (427)
+++ . +++++|||+++ +|||+|+.++.+++++| ++.++|+||+++|++++||+.
T Consensus 224 ~~~~~~~~~~d~~~~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A----~~~~~P~lI~v~t~kg~G~~~ 295 (629)
T 2o1x_A 224 PLADFMSRAKNSTRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERL----VDLDGPTILHIVTTKGKGLSY 295 (629)
T ss_dssp --------------------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHH----TTSSSEEEEEEECCTTTTCHH
T ss_pred HHHHHHHHHHHHHHhhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHH----HhcCCCEEEEEEEecCCCCCh
Confidence 132 3 78999999999 99999999988866554 567899999999999999973
No 11
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.95 E-value=9.9e-28 Score=260.60 Aligned_cols=228 Identities=17% Similarity=0.143 Sum_probs=170.5
Q ss_pred cccccCCCChHHHHHHHHH--hcCC-------CCEE-Ec-CCcc---hHHHHhcCC--CHHHHHHHHhcccCCCccCCCC
Q 014288 109 FGFVHLYNGQEAVSTGFIK--LLKK-------EDSV-VS-TYRD---HVHALSKGV--PARAVMSELFGKATGCCRGQGG 172 (427)
Q Consensus 109 ~G~~~~~~GqEa~~vg~~~--~L~~-------~D~v-~~-~yR~---~~~~La~g~--~~~~~~~el~g~~~g~~~G~gg 172 (427)
.|+..++.|.--+.+++-. .+++ .|.+ ++ .|-+ +++....|. +.+++. .+ .+..+.+
T Consensus 28 ~GH~g~~l~~~~i~~~L~~~~~~~~~~p~~~~rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~-~~-r~~g~~~----- 100 (680)
T 1gpu_A 28 SGHPGAPLGMAPAAHVLWSQMRMNPTNPDWINRDRFVLSNGHAVALLYSMLHLTGYDLSIEDLK-QF-RQLGSRT----- 100 (680)
T ss_dssp CSCCHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHTTCSCCHHHHT-TT-TCTTCSC-----
T ss_pred CCccCCchhHHHHHHHHHHhCCCCccCCCCCCCCEEEEecchHHHHHHHHHHHhCCCCCHHHHH-hh-cccCCCC-----
Confidence 3666566777766666654 3443 4755 44 3444 333334554 444432 11 1111110
Q ss_pred CCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC---CCceEEEEeCCCcccCccHHHHHHHHHHcCCC-e
Q 014288 173 SMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-I 248 (427)
Q Consensus 173 s~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-v 248 (427)
+.|......++...+|+||+++|.|+|+|+|.++++..++..+ .+++|||++|||++++|++||+|++|++++|| +
T Consensus 101 ~ghp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~~~eG~~~Eal~~A~~~~L~~l 180 (680)
T 1gpu_A 101 PGHPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNL 180 (680)
T ss_dssp CSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTE
T ss_pred CCCCCccCCCeeeccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCccchhhHHHHHHHHHHhCCCcE
Confidence 2233223456778899999999999999999998865554322 37899999999999999999999999999999 9
Q ss_pred EEEEEcCCccccccccccccCchhhcccccCCCcEE-EEeCC-CHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCC
Q 014288 249 VFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGM-DVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSL 326 (427)
Q Consensus 249 i~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~-D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~ 326 (427)
|+||+||+|+|+.+...+. .+++.+++++|||+++ .|||+ |+.++++++++|.+ ..++|+||+++|+|++||+.
T Consensus 181 i~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~---~~~~P~lI~~~T~kg~G~~~ 256 (680)
T 1gpu_A 181 IAIYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKL---SKDKPTLIKMTTTIGYGSLH 256 (680)
T ss_dssp EEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHH---CTTSCEEEEEECCTTTTSTT
T ss_pred EEEEECCCceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH---CCCCCEEEEEEeeccccccc
Confidence 9999999999998766543 5789999999999999 99999 99999997777653 36799999999999999997
Q ss_pred CCC----CCCCCHHHHHHHhcCChH
Q 014288 327 ADP----DELRDPAEKARYAARDPI 347 (427)
Q Consensus 327 ~D~----~~yR~~~e~~~~~~~DPi 347 (427)
.|+ ..||+++|++.|++++++
T Consensus 257 ~~~~~~H~~~~~~ee~~~~~~~~~~ 281 (680)
T 1gpu_A 257 AGSHSVHGAPLKADDVKQLKSKFGF 281 (680)
T ss_dssp TTSGGGSSSCCCHHHHHHHHHHTTC
T ss_pred CCCCccCCCCCCHHHHHHHHHHcCC
Confidence 775 579999999998866544
No 12
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.95 E-value=5.9e-27 Score=254.08 Aligned_cols=145 Identities=20% Similarity=0.212 Sum_probs=127.4
Q ss_pred CcccCCccCCCcchHHHHHHHHHHHHHhhhhhhc------CCCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEE
Q 014288 181 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEA------DCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVE 253 (427)
Q Consensus 181 ~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~------~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~ 253 (427)
.++...+|+||++++.|+|+|+|.|+++.+++++ ..+++|||++|||++++|++||++++|+.|+|| +|+||+
T Consensus 126 pgv~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GDG~l~eG~~~EAl~~A~~~~L~nli~i~d 205 (700)
T 3rim_A 126 PGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYD 205 (700)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCccccccccCCcchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECCcccccChHHHHHHHHHHcCCCcEEEEEE
Confidence 3667788999999999999999999987666542 357899999999999999999999999999998 999999
Q ss_pred cCCccccccccccccCchhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCC
Q 014288 254 NNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP 329 (427)
Q Consensus 254 NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~ 329 (427)
||+|+|+++.... ...++.+++++|||++++| ||+|+.++++++++|.+ ..++|+||+|+|+|++||+..+.
T Consensus 206 ~N~~si~~~~~~~-~~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~---~~~~P~lI~~~T~kG~G~~~~e~ 278 (700)
T 3rim_A 206 RNQISIEDDTNIA-LCEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQA---VTDRPSFIALRTVIGYPAPNLMD 278 (700)
T ss_dssp ECSEETTEEGGGT-CCCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTT
T ss_pred CCCcccccchhhc-cchhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHH---cCCCCEEEEEEEEeeecCCccCC
Confidence 9999999887754 3678999999999999999 99999999987766632 36899999999999999997654
No 13
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.95 E-value=2.1e-28 Score=264.85 Aligned_cols=163 Identities=20% Similarity=0.206 Sum_probs=140.8
Q ss_pred CcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC---CCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCC
Q 014288 181 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 256 (427)
Q Consensus 181 ~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~ 256 (427)
.++...+|+||+++|.|+|+|+|.++++.+++..+ ++++|||++|||++++|+++|+|++|++++|| +|+||+||+
T Consensus 111 ~g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~ 190 (651)
T 2e6k_A 111 PGVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGDLMEGVSGEAASLAGHWGLSKLIVFWDDNR 190 (651)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECC
T ss_pred CCeeeccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhhhchhHHHHHHHHHHHcCCCeEEEEEECCC
Confidence 46677889999999999999999998875554322 57899999999999999999999999999999 999999999
Q ss_pred ccccccccccccCchhhcccccCCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCCCCC---
Q 014288 257 WAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDEL--- 332 (427)
Q Consensus 257 y~is~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~~~y--- 332 (427)
|+|+.+..... .+++.+++++|||+++ +|||+|+.++++++++|. +.++|+||+++|+|++||+..|+..|
T Consensus 191 ~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~----~~~~P~lI~~~t~kg~G~~~~~~~~~H~~ 265 (651)
T 2e6k_A 191 ISIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAK----LDERPTLIAVRSHIGFGSPKQDSAKAHGE 265 (651)
T ss_dssp EETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHH----HSSSCEEEEEECCTTTTSTTTTSGGGTSS
T ss_pred ccccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHH----HCCCCEEEEEEeEeccccccccccccccc
Confidence 99998776654 6789999999999999 999999999999777664 36899999999999999995565555
Q ss_pred -CCHHHHHHHhcCChHH
Q 014288 333 -RDPAEKARYAARDPIT 348 (427)
Q Consensus 333 -R~~~e~~~~~~~DPi~ 348 (427)
++++|++.|++++|+.
T Consensus 266 ~~~~~e~~~~~~~~~~~ 282 (651)
T 2e6k_A 266 PLGPEAVEATRRNLGWP 282 (651)
T ss_dssp CCHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHcCCC
Confidence 5788888888777663
No 14
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.94 E-value=5.3e-26 Score=246.69 Aligned_cols=160 Identities=22% Similarity=0.218 Sum_probs=137.9
Q ss_pred CcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC---CCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCC
Q 014288 181 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 256 (427)
Q Consensus 181 ~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~ 256 (427)
.++...+|+||+++|.|+|+|+|.++++.+++.++ .+++|||++|||++++|.+||++++|++++|| +|+||+||+
T Consensus 109 pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG~~~eG~~~Eal~~A~~~~L~~li~i~d~N~ 188 (673)
T 1r9j_A 109 PGVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDGCLMEGVCQEALSLAGHLALEKLIVIYDSNY 188 (673)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CCeeeccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcchhcccHHHHHHHHHHHhCCCcEEEEEECCC
Confidence 36677889999999999999999998876665433 57899999999999999999999999999999 999999999
Q ss_pred ccccccccccccCchhhcccccCCCcEE-EEeC-CCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCC----C
Q 014288 257 WAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDG-MDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP----D 330 (427)
Q Consensus 257 y~is~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg-~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~----~ 330 (427)
|+|+.+...+. ..++.+++++|||+++ .||| +|+.++++++++|.+ ..++|+||+++|+|++||+..|. .
T Consensus 189 ~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~---~~~~P~lI~~~T~kg~G~~~~~~~~~H~ 264 (673)
T 1r9j_A 189 ISIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKA---TKGKPKMIVQTTTIGFGSSKQGTEKVHG 264 (673)
T ss_dssp BCSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTSTTTTSGGGTS
T ss_pred Cccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHH---cCCCCEEEEEecccccccccCCCccccc
Confidence 99998877665 6789999999999999 9999 999999997776643 36899999999999999995554 2
Q ss_pred CCCCHHHHHHHhcC
Q 014288 331 ELRDPAEKARYAAR 344 (427)
Q Consensus 331 ~yR~~~e~~~~~~~ 344 (427)
.+++++|++.++++
T Consensus 265 ~~~~~ee~~~~~~~ 278 (673)
T 1r9j_A 265 APLGEEDIANIKAK 278 (673)
T ss_dssp SCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh
Confidence 35788888877644
No 15
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.94 E-value=6.4e-27 Score=253.88 Aligned_cols=223 Identities=22% Similarity=0.221 Sum_probs=165.8
Q ss_pred cccccCCCChHHHHHHHH-HhcC--C-------CCEE-Ec-CCcc---hHHHHhcCC--CHHHH--HHHHhcccCCCccC
Q 014288 109 FGFVHLYNGQEAVSTGFI-KLLK--K-------EDSV-VS-TYRD---HVHALSKGV--PARAV--MSELFGKATGCCRG 169 (427)
Q Consensus 109 ~G~~~~~~GqEa~~vg~~-~~L~--~-------~D~v-~~-~yR~---~~~~La~g~--~~~~~--~~el~g~~~g~~~G 169 (427)
.|+..++.|.--+.+++- ..|+ + .|.+ ++ .|-. +++....|. +.+++ ++++.++.+
T Consensus 24 ~GH~g~~l~~~~i~~~L~~~~~~~~~~~p~~~~rDr~v~s~GH~~~~lYa~~~l~G~~~~~~~l~~~r~~~~~~~----- 98 (669)
T 2r8o_A 24 SGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTP----- 98 (669)
T ss_dssp CSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTSTTCSCC-----
T ss_pred CCccCCchhHHHHHHHHHHHhhcCCcCCCCCCCCCeEEEeCccHHHHHHHHHHHcCCCCCHHHHHHhhcCCCCCC-----
Confidence 366666777766666665 4443 3 4654 44 3444 333333454 45544 222211111
Q ss_pred CCCCCccc-cccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC---CCceEEEEeCCCcccCccHHHHHHHHHHcC
Q 014288 170 QGGSMHMF-SKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWK 245 (427)
Q Consensus 170 ~ggs~H~~-~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~ 245 (427)
.|.- ....++...+|+||+++|.|+|+|+|.+++++.+++.+ .+++|||++|||++++|+++|+|++|++++
T Consensus 99 ----ghp~~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG~~~eG~~~Eal~~A~~~~ 174 (669)
T 2r8o_A 99 ----GHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLK 174 (669)
T ss_dssp ----SSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTT
T ss_pred ----CCCCccCCCCcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHhHhcchHHHHHHHHHHHcC
Confidence 2321 12346778899999999999999999998865554322 378999999999999999999999999999
Q ss_pred CC-eEEEEEcCCccccccccccccCchhhcccccCCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCC
Q 014288 246 LP-IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 323 (427)
Q Consensus 246 LP-vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~g 323 (427)
|| +|+||+||+|+|+.+...+. ..++.+++++|||+++ +|||+|+.++++++++|.+ ..++|+||+++|+|+.|
T Consensus 175 L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G 250 (669)
T 2r8o_A 175 LGKLIAFYDDNGISIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARA---VTDKPSLLMCKTIIGFG 250 (669)
T ss_dssp CTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHH---CCSSCEEEEEECCTTTT
T ss_pred CCcEEEEEECCCcEecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHh---cCCCCEEEEEEeEeccC
Confidence 99 99999999999988766543 5789999999999999 9999999999997777653 36799999999999999
Q ss_pred CCC-CCC----CCCCCHHHHHHHhcC
Q 014288 324 HSL-ADP----DELRDPAEKARYAAR 344 (427)
Q Consensus 324 Hs~-~D~----~~yR~~~e~~~~~~~ 344 (427)
|+. .++ ..||+++|++.|+++
T Consensus 251 ~~~~~~~~~~H~~~~~~ee~~~~~~~ 276 (669)
T 2r8o_A 251 SPNKAGTHDSHGAPLGDAEIALTREQ 276 (669)
T ss_dssp CTTTTTSGGGTSSCCCHHHHHHHHHH
T ss_pred cCCcCCCCcccCCCCCHHHHHHHHHH
Confidence 995 443 469999999888654
No 16
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.94 E-value=3.9e-26 Score=247.92 Aligned_cols=251 Identities=18% Similarity=0.125 Sum_probs=172.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHH-Hhc--CC-------CCEEE-c-CCcc-
Q 014288 75 KLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFI-KLL--KK-------EDSVV-S-TYRD- 141 (427)
Q Consensus 75 ~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~-~~L--~~-------~D~v~-~-~yR~- 141 (427)
+.++.++|.++-. -+|...++.. ..-. .|+..++.|.--+.+++- ..+ +| .|.++ + .|-.
T Consensus 9 ~~l~~~~l~~~a~-~iR~~~~~~v--~~a~----~GH~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr~vls~GH~~~ 81 (675)
T 1itz_A 9 KAATGELLEKSVN-TIRFLAIDAV--EKAN----SGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVLSAGHGCM 81 (675)
T ss_dssp -CCCHHHHHHHHH-HHHHHHHHHH--HHHT----CSCCHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCEEEESSGGGHH
T ss_pred CCCCHHHHHHHHH-HHHHHHHHHH--HHcC----CCccCccHhHHHHHHHHHHHHhcCCcCCCCCCCCCeEEEcCcchHH
Confidence 5788898876532 2333333322 2111 356555677766666664 223 32 36544 4 3444
Q ss_pred --hHHHHhcCC---CHHHHHHHHhcccCCCccCCCCCCccc-cccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC
Q 014288 142 --HVHALSKGV---PARAVMSELFGKATGCCRGQGGSMHMF-SKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD 215 (427)
Q Consensus 142 --~~~~La~g~---~~~~~~~el~g~~~g~~~G~ggs~H~~-~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~ 215 (427)
+++....|. +.+++ ..+. +..+.+ +.|.- ....++...+|+||+++|.|+|+|+|.++++.+++..+
T Consensus 82 ~lYa~l~l~G~~~~~~~~l-~~~r-~~~~~~-----~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~ 154 (675)
T 1itz_A 82 LQYALLHLAGYDSVKEEDL-KQFR-QWGSRT-----PGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPD 154 (675)
T ss_dssp HHHHHHHHHTCTTCCHHHH-TTTT-STTCSS-----CSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTT
T ss_pred HHHHHHHHcCCCCCCHHHH-Hhcc-cCCCCC-----CCCCCCCCCCCeeECCccHHhHHHHHHHHHHHhhhhcccccccc
Confidence 333344554 33443 2211 111110 11221 11235667889999999999999999998876554332
Q ss_pred ---CCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCCccccccccccccCchhhcccccCCCcEE-EEeCC-
Q 014288 216 ---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGM- 289 (427)
Q Consensus 216 ---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~- 289 (427)
++++|||++|||++++|+++|+|++|++++|| +|+||+||+|+|+.+..... .+++.+++++|||+++ .|||+
T Consensus 155 ~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~ 233 (675)
T 1itz_A 155 SEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNT 233 (675)
T ss_dssp BCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTT
T ss_pred cCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCC
Confidence 68899999999999999999999999999995 99999999999988776544 6789999999999999 99999
Q ss_pred CHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCC-C----CCCCHHHHHHHhc
Q 014288 290 DVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP-D----ELRDPAEKARYAA 343 (427)
Q Consensus 290 D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~-~----~yR~~~e~~~~~~ 343 (427)
|+.++++++++|.+ ..++|+||+++|+|++||+..++ . .+.+++|++.+++
T Consensus 234 d~~~l~~al~~a~~---~~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~~ 289 (675)
T 1itz_A 234 GYDDIRAAIKEAKA---VTDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATRQ 289 (675)
T ss_dssp CHHHHHHHHHHHHH---CCSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH---CCCCeEEEEEeeecccCcccccCcccccCCCCCHHHHHHHHH
Confidence 99999887766542 26799999999999999996543 2 2456777766543
No 17
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.93 E-value=1.4e-25 Score=243.40 Aligned_cols=143 Identities=24% Similarity=0.289 Sum_probs=122.5
Q ss_pred CcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC---CCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCC
Q 014288 181 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 256 (427)
Q Consensus 181 ~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~ 256 (427)
.++...+|+||+++|.|+|+|+|.++++..+++.+ .++.|||++|||++++|+++|+|++|++++|| +|+|++||+
T Consensus 133 pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~ 212 (690)
T 3m49_A 133 AGVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGVSAEASSLAAHLQLGRLVVLYDSND 212 (690)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred CccccCCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhhhhccHHHHHHHHHHhCCCeEEEEEECCC
Confidence 34566789999999999999999998865544321 37899999999999999999999999999998 899999999
Q ss_pred ccccccccccccCchhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHc-cCCCEEEEEEEecCCCCCCCC
Q 014288 257 WAIGMSHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARR-GEGPTLVECETYRFRGHSLAD 328 (427)
Q Consensus 257 y~is~~~~~~~~~~d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~-~~gP~lIe~~t~R~~gHs~~D 328 (427)
|+|+.+.... ..+++.+++++|||++++| ||+|+.++.++++ ++++ .++|+||+|+|+|++|++..+
T Consensus 213 ~~i~~~~~~~-~~~d~~~~~~a~G~~~~~v~DG~d~~~l~~Al~----~a~~~~~~P~lI~v~T~kG~G~~~~~ 281 (690)
T 3m49_A 213 ISLDGDLNRS-FSESVEDRYKAYGWQVIRVEDGNDIEAIAKAIE----EAKADEKRPTLIEVRTTIGFGSPNKS 281 (690)
T ss_dssp BCSSSBGGGT-CCCCHHHHHHHHTCEEEEESCTTCHHHHHHHHH----HHHHCCSSCEEEEEECCTTTTCTTTT
T ss_pred eecccchhhc-cchhHHHHHHHcCCcEEEEecCCCHHHHHHHHH----HHHhcCCCCEEEEEEeecccccCccc
Confidence 9998876543 4578999999999999999 9999999888554 4555 689999999999999998544
No 18
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.93 E-value=5.2e-25 Score=236.87 Aligned_cols=205 Identities=20% Similarity=0.222 Sum_probs=155.0
Q ss_pred ccccCCCChHHHHHHHHHhcC---------CCCEEEc--CCcc---hHHHHhcCC--CHHHHH--HHHhcccCCCccCCC
Q 014288 110 GFVHLYNGQEAVSTGFIKLLK---------KEDSVVS--TYRD---HVHALSKGV--PARAVM--SELFGKATGCCRGQG 171 (427)
Q Consensus 110 G~~~~~~GqEa~~vg~~~~L~---------~~D~v~~--~yR~---~~~~La~g~--~~~~~~--~el~g~~~g~~~G~g 171 (427)
|+...+.|.--+.+++..+|+ +.|.++. .|-+ +++....|. +.+++. +++.+..+
T Consensus 27 GH~g~~lg~~ei~~~L~~~~~~~p~~p~~~~rDrfvls~GH~~~~lYa~l~l~G~~~~~~~l~~~r~~~s~~~------- 99 (632)
T 3l84_A 27 GHPGAPLGLADILSVLSYHLKHNPKNPTWLNRDRLVFSGGHASALLYSFLHLSGYDLSLEDLKNFRQLHSKTP------- 99 (632)
T ss_dssp SCCHHHHHHHHHHHHHTTTCCCCTTCTTCTTSCEEEESSGGGHHHHHHHHHHHTCSCCHHHHTTTTCTTCSSC-------
T ss_pred CCCCcChhHHHHHHHHHHHhCcCCCCCCCCCCCEEEEcCCcccHHHHHHHHHhCCCCCHHHHHHHhcCCCCCC-------
Confidence 565556777777777767775 3676654 3444 334444564 455532 22222221
Q ss_pred CCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEE
Q 014288 172 GSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVF 250 (427)
Q Consensus 172 gs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~ 250 (427)
.|.-....++...+|+||+++|.|+|+|+|.++++.+++....++.|||++|||++++|+++|+|++|++++|| +|+
T Consensus 100 --ghp~~~~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~eG~~~Eal~~A~~~~L~~liv 177 (632)
T 3l84_A 100 --GHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQEGISYEACSLAGLHKLDNFIL 177 (632)
T ss_dssp --SSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHSHHHHHHHHHHHHTTCTTEEE
T ss_pred --CCCCCCCCCcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhhccHHHHHHHHHHcCCCcEEE
Confidence 12211234566788999999999999999999887555433458899999999999999999999999999998 999
Q ss_pred EEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCC
Q 014288 251 VVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 328 (427)
Q Consensus 251 VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D 328 (427)
|++||+|+|+.+.... ..+++.+++++|||++++|||+|+.++.+++++ +++.++|+||+|+|+|++||+..+
T Consensus 178 i~nnN~~~i~~~~~~~-~~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~----A~~~~~P~lI~v~T~kG~G~~~~e 250 (632)
T 3l84_A 178 IYDSNNISIEGDVGLA-FNENVKMRFEAQGFEVLSINGHDYEEINKALEQ----AKKSTKPCLIIAKTTIAKGAGELE 250 (632)
T ss_dssp EEEECSEETTEEGGGT-CCCCHHHHHHHTTCEEEEEETTCHHHHHHHHHH----HHTCSSCEEEEEECCTTTTCGGGT
T ss_pred EEECCCcccccchhhh-cChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHH----HHhCCCCEEEEEeeEeeecCCCCC
Confidence 9999999998876554 357899999999999999999999998885554 456789999999999999998654
No 19
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.93 E-value=5.5e-25 Score=239.16 Aligned_cols=143 Identities=24% Similarity=0.318 Sum_probs=115.4
Q ss_pred CcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC---CCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCC
Q 014288 181 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 256 (427)
Q Consensus 181 ~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~ 256 (427)
.++...+|+||+++|+|+|+|+|.++++.++++++ .++.|||++|||++++|+++|+|++|++++|| +|+||+||+
T Consensus 148 ~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~l~eG~~~Eal~~A~~~~L~~livI~dnN~ 227 (711)
T 3uk1_A 148 PGVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNG 227 (711)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred CCcccCccchhhHHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcchhhccHHHHHHHHHHhCCCcEEEEEECCC
Confidence 45667889999999999999999998875544322 27899999999999999999999999999999 999999999
Q ss_pred ccccccccccccCchhhcccccCCCcEEE-EeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCC
Q 014288 257 WAIGMSHLRATSDPQIYKKGPAFGMPGFH-VDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLAD 328 (427)
Q Consensus 257 y~is~~~~~~~~~~d~~~~a~a~G~~~~~-Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D 328 (427)
|+|+.+...+ ..+++.+++++|||++++ |||+|+.++.+++++ +++.++|+||+|+|+|++||+..+
T Consensus 228 ~~i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~Al~~----A~~~~~P~lI~v~T~kG~G~~~~e 295 (711)
T 3uk1_A 228 ISIDGDVVNW-FHDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAK----AKRSDKPSLICCKTRIGNGAATKA 295 (711)
T ss_dssp EETTEEGGGT-CCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHH----HTTCSSCEEEEEEC----------
T ss_pred cccccchhhh-cCCCHHHHHHHcCCcEEEEeCCCCHHHHHHHHHH----HHhCCCCEEEEEccccccCCCCCC
Confidence 9998876655 367899999999999998 999999998886554 456789999999999999998643
No 20
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.92 E-value=1.5e-24 Score=233.18 Aligned_cols=136 Identities=23% Similarity=0.321 Sum_probs=118.4
Q ss_pred cccCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCCcccc
Q 014288 182 NLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWAIG 260 (427)
Q Consensus 182 ~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~y~is 260 (427)
++...+|+||+++|+|+|+|+|.++.+ ..++.|||++|||++++|++||+|++|++++|| +|+|++||+|+++
T Consensus 115 ~~d~~~G~lG~gl~~A~G~AlA~~~~~------~~~~~vv~v~GDG~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~ 188 (616)
T 3mos_A 115 FTDVATGSLGQGLGAACGMAYTGKYFD------KASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQS 188 (616)
T ss_dssp TCSSCCCSTTCHHHHHHHHHHHHHHTS------CCSCCEEEEEETGGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSS
T ss_pred cccccccccCCccHHHHHHHHHHHHhC------CCCCEEEEEECccccccCcHHHHHHHHHHcCCCcEEEEEECCCCCCc
Confidence 444578999999999999999988653 346899999999999999999999999999998 7788899999998
Q ss_pred ccccccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCCCCCC
Q 014288 261 MSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP 329 (427)
Q Consensus 261 ~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs~~D~ 329 (427)
.+.......+++.+++++|||++++|||+|+.++.+++++ ..++|+||+|+|+|++||+..++
T Consensus 189 ~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~------~~~~P~lI~v~T~kg~G~~~~e~ 251 (616)
T 3mos_A 189 DPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQ------AKHQPTAIIAKTFKGRGITGVED 251 (616)
T ss_dssp SBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHS------CCSSCEEEEEECCTTTTSTTTTT
T ss_pred CCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHh------cCCCCEEEEEEEecccccccccC
Confidence 8776655567899999999999999999999999886643 25799999999999999987653
No 21
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.92 E-value=1.1e-24 Score=241.43 Aligned_cols=280 Identities=16% Similarity=0.058 Sum_probs=196.5
Q ss_pred ccccccchhhhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccccCCCChHHHHHH-HHHhcC------CCC
Q 014288 61 RLPVVAVSEVVKEKKLITKQEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTG-FIKLLK------KED 133 (427)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~e~l~~ly~~M~~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg-~~~~L~------~~D 133 (427)
.|+++++.+.-++...+...++.+.+..-+|...++.........+++.|+..++.|.--+.++ ....|+ +.|
T Consensus 56 ~~~~l~~i~~~~~~~~p~d~~l~~~la~~iR~~~i~~v~~a~~~~~~~gGH~gs~ls~ael~~~l~~~~~~~~~~~~~~D 135 (886)
T 2qtc_A 56 ISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGD 135 (886)
T ss_dssp CCCSSCSSCGGGCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTCSCCCCCSHHHHHHHHHHHHHHHHTCCCCCSSSCCC
T ss_pred CCchhhhCCCccccCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccCcCCcHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 4788999998888888777787755566666666665544333456677887777776555444 455577 478
Q ss_pred EEEcC-Ccc---hHHHHhcCCCHHHHHHHHhcccCCCccCCCCCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhh
Q 014288 134 SVVST-YRD---HVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRRE 209 (427)
Q Consensus 134 ~v~~~-yR~---~~~~La~g~~~~~~~~el~g~~~g~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~ 209 (427)
+|+.. |-+ +++.+..|.-.++-|..+..-..+ .|..|..|....+.++...+|+||.+++.|+|+|++.|+...
T Consensus 136 ~V~~~GH~sp~~Ya~~~l~Gr~~~e~l~~fRq~~~~--~gl~~~p~~~~~p~~~~~~tG~~G~g~s~AiG~A~a~~~l~~ 213 (886)
T 2qtc_A 136 LVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHG--NGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEH 213 (886)
T ss_dssp EEECCGGGHHHHHHHHHHTTSSCHHHHTTBTCCTTS--SCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcchhHHHHHHHHHHhCCCCHHHHHhccCCCCC--CCCCCCCCcccCCCcccccccccCccHHHHHHHHHHhhhhcc
Confidence 77774 444 444556775433334433221111 122332332211223566789999999999999999998432
Q ss_pred hhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCCccccccccccc-cCchhhcccccCCCcEEEE-
Q 014288 210 VLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNLWAIGMSHLRAT-SDPQIYKKGPAFGMPGFHV- 286 (427)
Q Consensus 210 ~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~y~is~~~~~~~-~~~d~~~~a~a~G~~~~~V- 286 (427)
+....+.++.|||++|||++++|++||+||+|+.++|+ +||||+||+|+|+.+..... ...++.++++++||.+++|
T Consensus 214 ~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~~~~v~ 293 (886)
T 2qtc_A 214 RGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVM 293 (886)
T ss_dssp TTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCEEEEEC
T ss_pred cccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCCEEEEe
Confidence 22112568899999999999999999999999999997 99999999999998876532 3467899999999999998
Q ss_pred --------------------------------------------------------------------eCCCHHHHHHHH
Q 014288 287 --------------------------------------------------------------------DGMDVLKVREVA 298 (427)
Q Consensus 287 --------------------------------------------------------------------dg~D~~av~~a~ 298 (427)
||+|+.+|++++
T Consensus 294 ~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~l~~a~ 373 (886)
T 2qtc_A 294 WGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAF 373 (886)
T ss_dssp BCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHHHHHHH
T ss_pred cchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHHHHHHH
Confidence 699999999988
Q ss_pred HHHHHHHHccCCCEEEEEEEecCCCCCCC--CCC-----CCCCHHHHHHHhcCC
Q 014288 299 KEAIERARRGEGPTLVECETYRFRGHSLA--DPD-----ELRDPAEKARYAARD 345 (427)
Q Consensus 299 ~~A~~~ar~~~gP~lIe~~t~R~~gHs~~--D~~-----~yR~~~e~~~~~~~D 345 (427)
++|.+. .++|+||+++|+|++||+.. ++. .|++.++++.++.+.
T Consensus 374 ~~A~~~---~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r~~~ 424 (886)
T 2qtc_A 374 KKAQET---KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVRHIRDRF 424 (886)
T ss_dssp HHHHHC---CSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHHHT
T ss_pred HHHHHc---CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHHHHHHHc
Confidence 777542 35899999999999999742 222 267777777776543
No 22
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.92 E-value=1.3e-24 Score=235.10 Aligned_cols=144 Identities=24% Similarity=0.294 Sum_probs=119.0
Q ss_pred CcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcC---CCceEEEEeCCCcccCccHHHHHHHHHHcCCC-eEEEEEcCC
Q 014288 181 HNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEAD---CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP-IVFVVENNL 256 (427)
Q Consensus 181 ~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~---~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP-vi~VV~NN~ 256 (427)
.++...+|+||+++|+|+|+|+|.++++..+++++ .++.|||++|||++++|+++|+|++|++++|| +|+||+||+
T Consensus 109 ~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~l~eG~~~Eal~~A~~~~L~~livi~dnN~ 188 (663)
T 3kom_A 109 PGVETTTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGCLMEGVSHEACSLAGTLGLNKLVAFWDDNN 188 (663)
T ss_dssp TTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHHHHSHHHHHHHHHHHHHTCTTEEEEEEECC
T ss_pred CCcccCCcchhhHHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchhhhhchHHHHHHHHHHhCCCeEEEEEECCC
Confidence 35667889999999999999999998865443221 27899999999999999999999999999999 899999999
Q ss_pred ccccccccccccCchhhcccccCCCcEE-EEeCCCHHHHHHHHHHHHHHHHc-cCCCEEEEEEEecCCCCCCCCC
Q 014288 257 WAIGMSHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARR-GEGPTLVECETYRFRGHSLADP 329 (427)
Q Consensus 257 y~is~~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~D~~av~~a~~~A~~~ar~-~~gP~lIe~~t~R~~gHs~~D~ 329 (427)
|+|+.+.... ..+++.+++++|||+++ +|||+|+.++.+++++ +++ .++|+||+|+|+|++||+..++
T Consensus 189 ~~i~~~~~~~-~~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~----A~~~~~~P~lI~~~T~kg~G~~~~e~ 258 (663)
T 3kom_A 189 ISIDGDTKGW-FSDNTPERFRAYGWHVIENVDGHDFVAIEKAINE----AHSQQQKPTLICCKTVIGFGSPEKAG 258 (663)
T ss_dssp -----CGGGT-CCCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHH----HHHCSSSCEEEEEECCTTTTCTTTTT
T ss_pred cccccchhhh-cchhHHHHHHHCCCeEEEEEcCCCHHHHHHHHHH----HHhcCCCCEEEEEecccccccCCCCC
Confidence 9998876654 36789999999999999 9999999998886554 455 6899999999999999987643
No 23
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.89 E-value=1.9e-23 Score=224.25 Aligned_cols=162 Identities=19% Similarity=0.225 Sum_probs=125.3
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCC-ccccc-
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGM- 261 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~-y~is~- 261 (427)
.++.++||+++|.|+|++++ .++++|||++|||+++++ +++|++|.++++|+++||.||+ |++..
T Consensus 416 ~~~~g~~G~~l~~A~Gaala-----------~~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~ 482 (603)
T 4feg_A 416 SNLFATMGVGIPGAIAAKLN-----------YPERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKD 482 (603)
T ss_dssp CCSSCCTTCHHHHHHHHHHH-----------CTTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHH
T ss_pred CcccccccchhHHHhhHHHh-----------CCCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHH
Confidence 34679999999999999999 678899999999999998 8889999999999888888775 76521
Q ss_pred ---------cccccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHH--ccCCCEEEEEEEe---cCCCCCCC
Q 014288 262 ---------SHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERAR--RGEGPTLVECETY---RFRGHSLA 327 (427)
Q Consensus 262 ---------~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar--~~~gP~lIe~~t~---R~~gHs~~ 327 (427)
........+|+.+++++||+++++|++. .++.+ ++++++ +.+||+|||+.|+ |..+|...
T Consensus 483 ~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~--~~l~~----al~~a~~~~~~gP~lIev~~~~~~~~~~~~~~ 556 (603)
T 4feg_A 483 EQEDTNQNDFIGVEFNDIDFSKIADGVHMQAFRVNKI--EQLPD----VFEQAKAIAQHEPVLIDAVITGDRPLPAEKLR 556 (603)
T ss_dssp HHHHHCSSCCCSSBCCCCCHHHHHHHTTCEEEEECBG--GGHHH----HHHHHHHHTTTSCEEEEEECCCCCCCCTTSCC
T ss_pred HHHHhcCCCcccCcCCCCCHHHHHHHCCCeEEEECCH--HHHHH----HHHHHHHhcCCCcEEEEEEeCCCCCCCcccch
Confidence 1111224578999999999999999854 35555 555555 7889999999994 45577776
Q ss_pred CC-CCCCCHH--HHHHHhcCChHHHHHHHHHHcCCCCHHH
Q 014288 328 DP-DELRDPA--EKARYAARDPITALKKYLIESSLASEAE 364 (427)
Q Consensus 328 D~-~~yR~~~--e~~~~~~~DPi~~~~~~L~~~g~~t~ee 364 (427)
|+ ..||..+ +..+|.++||+.+|+++|.++|++++++
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~g~~~~~~ 596 (603)
T 4feg_A 557 LDSAMSSAADIEAFKQRYEAQDLQPLSTYLKQFGLDDLQH 596 (603)
T ss_dssp CCTTTSCHHHHHHHHHHHTCTTCCCHHHHHHHTTC-----
T ss_pred hhhhhhhHHHHHHHHhhCCcccCCchHHHHHHcCCchhhh
Confidence 54 5577554 5566667999999999999999998765
No 24
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.70 E-value=1.9e-17 Score=177.21 Aligned_cols=122 Identities=24% Similarity=0.324 Sum_probs=101.6
Q ss_pred CCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Cccccccc
Q 014288 185 GGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSH 263 (427)
Q Consensus 185 ~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~~ 263 (427)
++.|+||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++....
T Consensus 410 ~~~g~mG~~l~~AiGaala-----------~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~ 476 (590)
T 1v5e_A 410 PLFATMGIAIPGGLGAKNT-----------YPDRQVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNK 476 (590)
T ss_dssp CSSCCTTCHHHHHHHHHHH-----------CTTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGT
T ss_pred CCCCcccChHHHHHHHHHh-----------CCCCeEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHH
Confidence 4689999999999999999 678899999999999998 799999999999988888766 67775432
Q ss_pred ccc---------ccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCC
Q 014288 264 LRA---------TSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 322 (427)
Q Consensus 264 ~~~---------~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~ 322 (427)
+.. ...+|+.+++++||+++++|+ ++.++.+++++|++.++. +||+|||+.|+|..
T Consensus 477 q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~-~gp~liev~~~~~~ 541 (590)
T 1v5e_A 477 YEDTNKNLFGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMDRVMAEAVAANKA-GHTVVIDCKITQDR 541 (590)
T ss_dssp TSSSCCSCCCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHHHHHHHHHHHHHT-TCCEEEEEECCSCC
T ss_pred HHHhcCCCccccCCCCCHHHHHHHcCCEEEEEC--CHHHHHHHHHHHHHhcCC-CCCEEEEEEecccc
Confidence 211 134789999999999999997 467888888888766553 79999999999865
No 25
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.68 E-value=2.3e-17 Score=174.07 Aligned_cols=114 Identities=22% Similarity=0.415 Sum_probs=94.1
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Cccccccccc-
Q 014288 188 AFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSHLR- 265 (427)
Q Consensus 188 g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~~~~- 265 (427)
|+||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++....+.
T Consensus 401 g~~G~~l~~A~G~a~a-----------~~~~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~ 467 (528)
T 1q6z_A 401 GGLGFALPAAIGVQLA-----------EPERQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGV 467 (528)
T ss_dssp CCTTSHHHHHHHHHHH-----------CTTSCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHH
T ss_pred ccccchHHHHHHHHHh-----------CCCCcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHH
Confidence 9999999999999999 578899999999999998 899999999999988888777 4777443211
Q ss_pred ---------cccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 266 ---------ATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 266 ---------~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
....+|+.+++++||+++++|++. .++. ++++++++.+||+|||+.|.+
T Consensus 468 ~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~--~~l~----~al~~a~~~~gp~liev~~~~ 525 (528)
T 1q6z_A 468 LEAENVPGLDVPGIDFRALAKGYGVQALKADNL--EQLK----GSLQEALSAKGPVLIEVSTVS 525 (528)
T ss_dssp HTCCSCCSCBCCCCCHHHHHHHHTCEEEEESSH--HHHH----HHHHHHHTCSSCEEEEEEBCC
T ss_pred hcCCCcccCCCCCCCHHHHHHHcCCeEEEeCCH--HHHH----HHHHHHHHCCCcEEEEEEecC
Confidence 013568999999999999999854 4554 456666678899999999975
No 26
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.67 E-value=5.4e-17 Score=174.38 Aligned_cols=124 Identities=20% Similarity=0.178 Sum_probs=102.2
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.+++|+||+++|.|+|+|+| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 438 ~g~~G~~G~~l~~AiGaala-----------~~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~ 504 (616)
T 2pan_A 438 CGQAGPLGWTIPAALGVCAA-----------DPKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQ 504 (616)
T ss_dssp CTTTCCTTCHHHHHHHHHHH-----------CTTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHH
T ss_pred CCCcccccchHHHHHHHHHh-----------CCCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHH
Confidence 45679999999999999999 678899999999999987 789999999999987777766 4766422
Q ss_pred cc----------------cccc----CchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCC
Q 014288 263 HL----------------RATS----DPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 322 (427)
Q Consensus 263 ~~----------------~~~~----~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~ 322 (427)
.+ .... .+|+.+++++||+++++|+. +.++.+++++|++++++.+||+|||+.|+|..
T Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 505 SQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFK--PEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp HGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEECS--GGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred HHHHhcCCccccccccccccccCCCCCCCHHHHHHHcCCeEEEECC--HHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 10 0111 26899999999999999974 56888888888877776789999999999865
No 27
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.65 E-value=6.4e-17 Score=172.24 Aligned_cols=119 Identities=18% Similarity=0.199 Sum_probs=95.5
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.++||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 416 ~~g~g~mG~~l~~AiGaala-----------~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~ 482 (566)
T 1ozh_A 416 SNGQQTMGVALPWAIGAWLV-----------NPERKVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAI 482 (566)
T ss_dssp CCTTCCTTCHHHHHHHHHHH-----------STTSEEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHH
T ss_pred CCCcccccchHHHHHHHHHh-----------CCCCCEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHH
Confidence 35679999999999999999 678899999999999986 789999999999988887776 5766442
Q ss_pred cc---------ccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecC
Q 014288 263 HL---------RATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRF 321 (427)
Q Consensus 263 ~~---------~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~ 321 (427)
.+ .....+|+.+++++||+++++|++ +.++.+++++| ++.+||+|||+.|+|.
T Consensus 483 ~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~a----~~~~gp~liev~~~~~ 544 (566)
T 1ozh_A 483 QEEKKYQRLSGVEFGPMDFKAYAESFGAKGFAVES--AEALEPTLRAA----MDVDGPAVVAIPVDYR 544 (566)
T ss_dssp HHHHHHSSCCSCBCCCCCHHHHHHTTTSEEEECCS--GGGHHHHHHHH----HHSSSCEEEEEEBCCT
T ss_pred HHHHhcCCCccCcCCCCCHHHHHHHcCCeEEEeCC--HHHHHHHHHHH----HhCCCCEEEEEEeCCC
Confidence 21 122347899999999999999985 45666655544 4578999999999764
No 28
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.65 E-value=7.1e-17 Score=172.64 Aligned_cols=121 Identities=22% Similarity=0.296 Sum_probs=97.3
Q ss_pred CCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCC-ccccccc
Q 014288 185 GGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSH 263 (427)
Q Consensus 185 ~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~-y~is~~~ 263 (427)
.+.|+||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.||+ |++....
T Consensus 421 ~g~g~mG~~l~~AiGaala-----------~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~ 487 (589)
T 2pgn_A 421 MAEGILGCGFPMALGAQLA-----------EPNSRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTL 487 (589)
T ss_dssp TTTCCTTCHHHHHHHHHHH-----------CTTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHH
T ss_pred CCcchhhhHHHHHHHHHHh-----------CCCCcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHH
Confidence 4679999999999999999 678899999999999997 7999999999999887777665 6665432
Q ss_pred c---------ccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCC
Q 014288 264 L---------RATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGH 324 (427)
Q Consensus 264 ~---------~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gH 324 (427)
+ .....+|+.+++++||+++++|++. .++.+++++| ++.+||+|||+.|+|..+.
T Consensus 488 ~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~--~el~~al~~a----~~~~gp~liev~~~~~~~~ 551 (589)
T 2pgn_A 488 MNHQFGQNNWTEFMNPDWVGIAKAFGAYGESVRET--GDIAGALQRA----IDSGKPALIEIPVSKTQGL 551 (589)
T ss_dssp HHHHHSSCCSCBCCCCCHHHHHHHHTCEEEECTTT--CCHHHHHHHH----HHHCSCEEEEEECCSSSST
T ss_pred HHhhcCCCccccCCCCCHHHHHHHCCCeEEEECCH--HHHHHHHHHH----HhCCCCEEEEEEecCCCCc
Confidence 1 1123578999999999999999865 4666655555 4468999999999987654
No 29
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.64 E-value=1.3e-16 Score=170.50 Aligned_cols=121 Identities=23% Similarity=0.331 Sum_probs=96.2
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.+++|+||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 422 ~g~~G~~G~~l~~AiGaala-----------~~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~ 488 (590)
T 1ybh_A 422 SGGLGAMGFGLPAAIGASVA-----------NPDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQ 488 (590)
T ss_dssp CCSSCCTTCHHHHHHHHHHH-----------CTTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHH
T ss_pred CCCcccccchHHHHHHHHHh-----------CCCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHH
Confidence 45679999999999999999 678899999999999987 789999999999977777665 6766432
Q ss_pred cc---------cc---c------cCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCC
Q 014288 263 HL---------RA---T------SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 323 (427)
Q Consensus 263 ~~---------~~---~------~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~g 323 (427)
.+ .. . ..+|+.+++++||+++++|+ ++.++.++++ ++++.+||+|||+.|+|...
T Consensus 489 ~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~----~a~~~~gp~liev~~~~~~~ 561 (590)
T 1ybh_A 489 WEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQ----TMLDTPGPYLLDVICPHQEH 561 (590)
T ss_dssp HHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHH----HHHHSSSCEEEEEECCTTCC
T ss_pred HHHHhcCCccccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHH----HHHhCCCCEEEEEEecCCcc
Confidence 10 00 1 14689999999999999997 4566666554 44556899999999998764
No 30
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.63 E-value=1.5e-16 Score=169.29 Aligned_cols=119 Identities=22% Similarity=0.326 Sum_probs=95.1
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.++||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 405 ~~~~g~mG~~l~~A~G~ala-----------~~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~ 471 (566)
T 2vbi_A 405 EMQWGHIGWSVPSAFGNAMG-----------SQDRQHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIA 471 (566)
T ss_dssp CTTTCCTTTHHHHHHHHHHT-----------CTTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHT
T ss_pred cCcccchhhHHHHHHHHHHh-----------CCCCcEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEe
Confidence 35689999999999999999 678899999999999986 788999999999977777655 6776543
Q ss_pred ccc----cccCchhhcccccCCC-----cEEEEeCCCHHHHHHHHHHHHHHHHcc-CCCEEEEEEEecC
Q 014288 263 HLR----ATSDPQIYKKGPAFGM-----PGFHVDGMDVLKVREVAKEAIERARRG-EGPTLVECETYRF 321 (427)
Q Consensus 263 ~~~----~~~~~d~~~~a~a~G~-----~~~~Vdg~D~~av~~a~~~A~~~ar~~-~gP~lIe~~t~R~ 321 (427)
... ....+|+.+++++||+ ++++|+ ++.++.+++++ +++. +||+|||+.|+|.
T Consensus 472 ~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~----a~~~~~gp~liev~~~~~ 534 (566)
T 2vbi_A 472 IHDGPYNYIKNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIAR----AKANTRGPTLIECQIDRT 534 (566)
T ss_dssp TSCCGGGCCCCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHH----HHHCCSSCEEEEEECCTT
T ss_pred eccCCccCCCCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHH----HHhcCCCcEEEEEEeCcc
Confidence 221 1235789999999999 999997 45666665554 4555 8999999999763
No 31
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.63 E-value=2.4e-16 Score=167.04 Aligned_cols=118 Identities=16% Similarity=0.127 Sum_probs=95.0
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.|+||+++|.|+|+++| .+++.|||++|||+++++ +++|.+|.++++|+++||.|| +|++...
T Consensus 404 ~~~~g~mG~~l~~A~G~a~a-----------~~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~ 470 (552)
T 1ovm_A 404 QPLWGSIGYTLAAAFGAQTA-----------CPNRRVIVLTGDGAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERA 470 (552)
T ss_dssp CTTTCCTTHHHHHHHHHHHH-----------CTTSCEEEEEEHHHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHH
T ss_pred chhhHhhhhHHHHHHHHHHh-----------CCCCcEEEEECchHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEe
Confidence 45689999999999999999 678899999999999886 889999999999987777766 5776532
Q ss_pred cc------ccccCchhhcccccCCC----cEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 263 HL------RATSDPQIYKKGPAFGM----PGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 263 ~~------~~~~~~d~~~~a~a~G~----~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
.. .....+|+.+++++||+ ++++|++ +.++.+ +++++++.+||+|||+.|++
T Consensus 471 ~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~v~~--~~~l~~----al~~a~~~~gp~liev~~~~ 532 (552)
T 1ovm_A 471 IHGAEQRYNDIALWNWTHIPQALSLDPQSECWRVSE--AEQLAD----VLEKVAHHERLSLIEVMLPK 532 (552)
T ss_dssp HSCTTCGGGCCCCCCGGGSTTTSCSSCCEEEEEECB--HHHHHH----HHHHHTTCSSEEEEEEECCT
T ss_pred eccCCCCcccCCCCCHHHHHHHhCCCcCCCEEEeCC--HHHHHH----HHHHHHhCCCCEEEEEEcCc
Confidence 11 11234789999999999 9999984 456555 55556677899999999875
No 32
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.63 E-value=1.7e-16 Score=172.53 Aligned_cols=121 Identities=24% Similarity=0.339 Sum_probs=96.7
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.|+||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 509 sg~~G~mG~~lpaAiGaalA-----------~p~~~Vv~i~GDGsf~~~--~~eL~ta~~~~l~v~ivV~NN~~~g~~~~ 575 (677)
T 1t9b_A 509 SGGLGTMGYGLPAAIGAQVA-----------KPESLVIDIDGDASFNMT--LTELSSAVQAGTPVKILILNNEEQGMVTQ 575 (677)
T ss_dssp CCSSCCTTCHHHHHHHHHHH-----------CTTSEEEEEEEHHHHHHH--GGGHHHHHHHTCCCEEEEEECSSCHHHHH
T ss_pred CCCcchhhchHHHHHHHHHh-----------CCCCeEEEEEeehHHhcc--HHHHHHHHHhCCCeEEEEEeCCCchhhhh
Confidence 46679999999999999999 678999999999999986 788999999999987777766 5665432
Q ss_pred cc-----c-----cccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCC
Q 014288 263 HL-----R-----ATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 323 (427)
Q Consensus 263 ~~-----~-----~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~g 323 (427)
.+ . ....+|+.+++++||+++++|+ ++.++.+++++ +++.++|+|||+.|+|...
T Consensus 576 ~~~~~~~~~~~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~----a~~~~gp~lIev~~~~~~~ 640 (677)
T 1t9b_A 576 WQSLFYEHRYSHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKE----FVSTKGPVLLEVEVDKKVP 640 (677)
T ss_dssp HHHHHSTTCCCSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHH----HHHCSSCEEEEEEBCSSCC
T ss_pred hhhhhcCCCcccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHH----HHHCCCcEEEEEEecCCcc
Confidence 11 0 1135789999999999999996 45666665554 4557899999999998654
No 33
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.63 E-value=1.9e-16 Score=168.79 Aligned_cols=118 Identities=25% Similarity=0.240 Sum_probs=95.5
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.|+||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 432 ~~g~g~mG~~l~~AiGaa~a-----------~~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~ 498 (573)
T 2iht_A 432 SAGCSSFGYGIPAAIGAQMA-----------RPDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIEL 498 (573)
T ss_dssp CSSSCCTTCHHHHHHHHHHH-----------STTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHH
T ss_pred CCCCcccccHHHHHHHHHHh-----------CCCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHH
Confidence 35679999999999999999 578899999999999987 789999999999987777766 5776543
Q ss_pred cc-----------ccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 263 HL-----------RATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 263 ~~-----------~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
.+ .....+|+.+++++||+++++|+ ++.++.+ +++++++.+||+|||+.|+|
T Consensus 499 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~----al~~a~~~~gp~liev~~~~ 561 (573)
T 2iht_A 499 YQNIGHHRSHDPAVKFGGVDFVALAEANGVDATRAT--NREELLA----ALRKGAELGRPFLIEVPVNY 561 (573)
T ss_dssp HHHHHHSSCCGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHH----HHHHHHTSSSCEEEEEEBCC
T ss_pred HHHHhcCCCcCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHH----HHHHHHhCCCCEEEEEECCC
Confidence 11 11234789999999999999997 4556655 55555667899999999988
No 34
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.63 E-value=2.4e-16 Score=167.85 Aligned_cols=119 Identities=21% Similarity=0.159 Sum_probs=94.6
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.++||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 421 ~~~~g~mG~~l~~A~Gaala-----------~~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~ 487 (570)
T 2vbf_A 421 QPLWGSIGYTFPAALGSQIA-----------DKESRHLLFIGDGSLQLT--VQELGLSIREKLNPICFIINNDGYTVERE 487 (570)
T ss_dssp CTTTCCTTTHHHHHHHHHHH-----------CTTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHH
T ss_pred CccchhhhhhHHHHHHHHHh-----------CCCCcEEEEEcchhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHH
Confidence 46789999999999999999 678899999999999986 788999999999977777655 6776442
Q ss_pred cc------ccccCchhhcccccCCCc-----EEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 263 HL------RATSDPQIYKKGPAFGMP-----GFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 263 ~~------~~~~~~d~~~~a~a~G~~-----~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
.. .....+|+.+++++||++ +++|++ +.++.++++++ +++.++|+|||+.|+|
T Consensus 488 ~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~v~~--~~el~~al~~a---~~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 488 IHGPTQSYNDIPMWNYSKLPETFGATEDRVVSKIVRT--ENEFVSVMKEA---QADVNRMYWIELVLEK 551 (570)
T ss_dssp HSCTTCGGGCCCCCCGGGHHHHTTCCTTTEEEEEECB--HHHHHHHHHHH---HHCTTSEEEEEEECCT
T ss_pred HhccCCCccCCCCCCHHHHHHHcCCCcCCcceEEecC--HHHHHHHHHHH---HhcCCCcEEEEEEcCc
Confidence 21 112347899999999998 889974 55665554442 3567899999999976
No 35
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.62 E-value=2.3e-16 Score=167.69 Aligned_cols=123 Identities=18% Similarity=0.171 Sum_probs=95.3
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.|+||+++|.|+|+|+|.+.+ +.++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 409 ~~~~g~mG~~l~~A~Gaala~~~~-------~~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~ 479 (563)
T 2vk8_A 409 QVLWGSIGFTTGATLGAAFAAEEI-------DPKKRVILFIGDGSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKL 479 (563)
T ss_dssp CTTTCCTTHHHHHHHHHHHHHHHH-------CTTCCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHH
T ss_pred ccchhhhhhHHHHHHHHHHhCccc-------CCCCCEEEEEcchHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhh
Confidence 467899999999999999997654 456889999999999986 889999999999988887766 5776432
Q ss_pred cc------ccccCchhhcccccCCCc---EEEEeCCCHHHHHHHHHHHHHHHHc-cCCCEEEEEEEec
Q 014288 263 HL------RATSDPQIYKKGPAFGMP---GFHVDGMDVLKVREVAKEAIERARR-GEGPTLVECETYR 320 (427)
Q Consensus 263 ~~------~~~~~~d~~~~a~a~G~~---~~~Vdg~D~~av~~a~~~A~~~ar~-~~gP~lIe~~t~R 320 (427)
.. .....+|+.+++++||++ +++|++ ++++.+++++ ++.+ .++|+|||++|++
T Consensus 480 ~~~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~v~~--~~el~~al~~---~a~~~~~~p~liev~~~~ 542 (563)
T 2vk8_A 480 IHGPKAQYNEIQGWDHLSLLPTFGAKDYETHRVAT--TGEWDKLTQD---KSFNDNSKIRMIEVMLPV 542 (563)
T ss_dssp HSCTTCGGGCCCCCCGGGHHHHTTCSSEEEEEECB--HHHHHHHHTC---TTTTSCSSEEEEEEECCT
T ss_pred hhCCCCCcccCCCCCHHHHHHHhCCCCCcEEEecC--HHHHHHHHHH---HHHhCCCCcEEEEEEeCc
Confidence 11 112346899999999999 999984 5566665440 3334 3479999999875
No 36
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.62 E-value=2.4e-16 Score=167.63 Aligned_cols=120 Identities=22% Similarity=0.356 Sum_probs=94.9
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.|+||+++|.|+|+++|.| ++++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 415 ~~g~g~~G~~l~~AiGaa~a~~---------~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~ 483 (563)
T 2uz1_A 415 HGYLGSMGVGFGTALGAQVADL---------EAGRRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLH 483 (563)
T ss_dssp CCTTCCTTTHHHHHHHHHHHHH---------HHTCEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHH
T ss_pred CCCCccccChHHHHHHHHHHhh---------CCCCeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHH
Confidence 3467999999999999999954 157899999999999997 789999999999987777766 5776543
Q ss_pred cc-------cc----ccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 263 HL-------RA----TSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 263 ~~-------~~----~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
.+ .. ...+|+.+++++||+++++|+ ++.++.+++++| ++.+||+|||+.|++
T Consensus 484 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a----~~~~gp~liev~~~~ 546 (563)
T 2uz1_A 484 FQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQA----LAHNRPACINVAVAL 546 (563)
T ss_dssp HHHHHTCTTCCCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHH----HHSSSCEEEEEECCS
T ss_pred HHHHhcCCCcccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHH----HHCCCCEEEEEEecc
Confidence 21 11 134689999999999999997 456766655554 457899999999974
No 37
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.62 E-value=4.3e-16 Score=165.81 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=94.6
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCC-c-cccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-W-AIGM 261 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~-y-~is~ 261 (427)
.+..|+||+++|.|+|+++| +++.|||++|||++++. +++|++|.++++|+++||.||+ | .+.
T Consensus 422 ~g~~g~~G~~l~~AiGaala------------~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~- 486 (568)
T 2c31_A 422 SGTWGVMGIGMGYCVAAAAV------------TGKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKGN- 486 (568)
T ss_dssp STTTTCSSCHHHHHHHHHHH------------HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCSC-
T ss_pred CCCCccccccHHHHHHHHhC------------CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHH-
Confidence 46779999999999999998 36789999999999986 7899999999999999998887 2 222
Q ss_pred ccc----c----cccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCC
Q 014288 262 SHL----R----ATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 322 (427)
Q Consensus 262 ~~~----~----~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~ 322 (427)
... . ....+|+.+++++||+++++|+ ++.++.+++++|+ +.++|+|||++|+|..
T Consensus 487 ~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~----~~~~p~liev~~~~~~ 549 (568)
T 2c31_A 487 EADPQPGVISCTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAV----ASGKPCLINAMIDPDA 549 (568)
T ss_dssp CCCSBTTBCCTTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHH----HHTSCEEEEEEBCTTS
T ss_pred HHHhhcCCcccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHH----hCCCCEEEEEEecccc
Confidence 111 0 0245789999999999999997 5667766665554 4679999999998753
No 38
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.62 E-value=3.8e-16 Score=165.57 Aligned_cols=120 Identities=24% Similarity=0.314 Sum_probs=93.9
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.|+||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 402 ~~~~g~mG~~l~~AiGaala-----------~~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~ 468 (549)
T 3eya_A 402 SFNHGSMANAMPQALGAQAT-----------EPERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAM 468 (549)
T ss_dssp CTTTCCTTCHHHHHHHHHHH-----------STTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC--
T ss_pred CCCCchhhhHHHHHHHHHHh-----------CCCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHH
Confidence 34679999999999999999 678899999999999887 889999999999987777766 5665321
Q ss_pred ccc---------cccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCC
Q 014288 263 HLR---------ATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFR 322 (427)
Q Consensus 263 ~~~---------~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~ 322 (427)
.+. ....+|+.+++++||+++++|+.. .++.++ ++++++.+||+|||+.|.+..
T Consensus 469 ~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~--~~l~~a----l~~a~~~~gp~liev~~~~~~ 531 (549)
T 3eya_A 469 EMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKA--SEVDEA----LQRAFSIDGPVLVDVVVAKEE 531 (549)
T ss_dssp ----------CCBCCCCCHHHHHHHTTSEEEEECSG--GGHHHH----HHHHHHSSSCEEEEEEBCCCC
T ss_pred HHHhcCCCCcCCcCCCCCHHHHHHHcCCcEEEeCCH--HHHHHH----HHHHHhCCCCEEEEEEecccc
Confidence 111 113478999999999999999744 466554 445556789999999998754
No 39
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.61 E-value=5.5e-16 Score=164.94 Aligned_cols=118 Identities=23% Similarity=0.272 Sum_probs=94.3
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.++||+++|.|+|+++| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 409 ~~~~g~~G~~l~~A~G~ala-----------~~~~~vv~i~GDGs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~ 475 (568)
T 2wvg_A 409 EMQWGHIGWSVPAAFGYAVG-----------APERRNILMVGDGSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVM 475 (568)
T ss_dssp CTTTCCTTTHHHHHHHHHHH-----------CTTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHT
T ss_pred CCCcchhhhHHHHHHHHHHh-----------CCCCcEEEEEcChhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeee
Confidence 45689999999999999999 678999999999999886 788999999999977666655 6776543
Q ss_pred ccc----cccCchhhcccccCCC---------cEEEEeCCCHHHHHHHHHHHHHHHHcc-CCCEEEEEEEec
Q 014288 263 HLR----ATSDPQIYKKGPAFGM---------PGFHVDGMDVLKVREVAKEAIERARRG-EGPTLVECETYR 320 (427)
Q Consensus 263 ~~~----~~~~~d~~~~a~a~G~---------~~~~Vdg~D~~av~~a~~~A~~~ar~~-~gP~lIe~~t~R 320 (427)
... ....+|+.+++++||+ ++++|+ +..++.++++++ .+. +||+|||+.|+|
T Consensus 476 ~~~~~~~~~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~el~~al~~a----~~~~~gp~liev~~~~ 541 (568)
T 2wvg_A 476 IHDGPYNNIKNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGGELAEAIKVA----LANTDGPTLIECFIGR 541 (568)
T ss_dssp TSCCGGGCCCCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHHHHHHHHHHH----HHCCSSCEEEEEECCT
T ss_pred eccCCCcCCCCCCHHHHHHHhCCCcccccCCcceEEeC--CHHHHHHHHHHH----HhcCCCcEEEEEEcCc
Confidence 321 1234689999999999 899997 456666655555 444 799999999976
No 40
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.59 E-value=3.7e-16 Score=166.28 Aligned_cols=118 Identities=20% Similarity=0.235 Sum_probs=93.5
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Ccccccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMS 262 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~ 262 (427)
.++.|+||+++|.|+|+|+| .+++.|||++|||+++++ +++|++|.++++|+++||.|| +|++...
T Consensus 418 ~~~~g~mG~~l~~A~G~ala-----------~~~~~vv~i~GDG~~~~~--~~~l~ta~~~~l~~~ivv~nN~~~~~~~~ 484 (565)
T 2nxw_A 418 PGYYAGMGFGVPAGIGAQCV-----------SGGKRILTVVGDGAFQMT--GWELGNCRRLGIDPIVILFNNASWEMLRT 484 (565)
T ss_dssp CTTTCCTTCHHHHHHHHHHH-----------TTTCCEEEEEEHHHHHHH--GGGGGGHHHHTCCCEEEEEECSBCHHHHH
T ss_pred cCccccccccchHHHHHHHh-----------CCCCcEEEEEechHHHhh--HHHHHHHHHhCCCCEEEEEECCCCcEEee
Confidence 45679999999999999999 578899999999999876 889999999999977777666 5666422
Q ss_pred cc-----ccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCE-EEEEEEec
Q 014288 263 HL-----RATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT-LVECETYR 320 (427)
Q Consensus 263 ~~-----~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~-lIe~~t~R 320 (427)
.+ .....+|+.+++++||+++++|++ +.++.+++++ +.+.++|+ |||+.|++
T Consensus 485 ~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~----a~~~~gp~~liev~~~~ 542 (565)
T 2nxw_A 485 FQPESAFNDLDDWRFADMAAGMGGDGVRVRT--RAELKAALDK----AFATRGRFQLIEAMIPR 542 (565)
T ss_dssp HCTTCGGGBCCCCCHHHHTGGGTSEEEEECB--HHHHHHHHHH----HHHCCSSCEEEEEECCT
T ss_pred ecccCCCCcCCCCCHHHHHHHcCCCEEEeCC--HHHHHHHHHH----HHhcCCCeEEEEEEccc
Confidence 11 112457899999999999999984 5566665554 44567898 99999975
No 41
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.59 E-value=1.9e-15 Score=160.68 Aligned_cols=119 Identities=21% Similarity=0.228 Sum_probs=94.6
Q ss_pred cCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCC-c-cccc
Q 014288 184 LGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-W-AIGM 261 (427)
Q Consensus 184 ~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~-y-~is~ 261 (427)
.+..|+||+++|.|+|+++| +++.|||++|||++++. .++|++|.++++|+++||.||+ | ++ .
T Consensus 417 ~g~~g~~G~~l~~AiGaa~a------------~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~-~ 481 (564)
T 2q28_A 417 CGTWGVMGIGMGYAIGASVT------------SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRG-D 481 (564)
T ss_dssp STTTTCTTCHHHHHHHHHHH------------HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCS-C
T ss_pred CCCCCcccchHHHHHHHhhc------------CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHH-H
Confidence 46779999999999999998 36789999999999886 6899999999999998888887 2 33 2
Q ss_pred ccc-------c---cccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCC
Q 014288 262 SHL-------R---ATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRG 323 (427)
Q Consensus 262 ~~~-------~---~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~g 323 (427)
... . ....+|+.+++++||+++++|+ ++.++.+++++|+ +.++|+|||+.|.|...
T Consensus 482 ~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~----~~~~p~liev~~~~~~~ 547 (564)
T 2q28_A 482 GVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGI----QSRKPTIINVVIDPAAG 547 (564)
T ss_dssp CCCTTSSCCCCTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHH----HHTSCEEEEEEBCTTSS
T ss_pred HHHHhccCCccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHH----hCCCCEEEEEEeccccC
Confidence 111 0 1124789999999999999997 4567766665554 46799999999987543
No 42
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.58 E-value=5.5e-15 Score=161.81 Aligned_cols=197 Identities=15% Similarity=0.175 Sum_probs=145.7
Q ss_pred ecccccCCCChHHHHHHHHHhcCC--CCEEEcCCcchHHHHh------cCC--------C--HHHH---HHHHhcccCCC
Q 014288 108 MFGFVHLYNGQEAVSTGFIKLLKK--EDSVVSTYRDHVHALS------KGV--------P--ARAV---MSELFGKATGC 166 (427)
Q Consensus 108 ~~G~~~~~~GqEa~~vg~~~~L~~--~D~v~~~yR~~~~~La------~g~--------~--~~~~---~~el~g~~~g~ 166 (427)
..|+...+.|+--+.+.+..+++. .|.+|-.--||+..+. .|. + ++++ ++++ ++..+
T Consensus 81 ~sGH~G~~~g~a~iy~~~~~~~~~~~rDr~fvls~GHg~p~lYa~l~l~G~~~~~~p~~s~d~e~Lk~lfrqf-s~~gg- 158 (845)
T 3ahc_A 81 LVGHWGTTPGLNFLLAHINRLIADHQQNTVFIMGPGHGGPAGTSQSYVDGTYTEYYPNITKDEAGLQKFFRQF-SYPGG- 158 (845)
T ss_dssp CCSCCTTHHHHHHHHHHHHHHHHHHTBCBCCEESSGGGHHHHHHHHHHHTHHHHHCTTSCSSHHHHHHHHHHB-TCTTS-
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccCCCceEEEECcCcHHHHHHHHHHHcCCCccccccccccHHHHHHHHHhc-cCCCC-
Confidence 457766667776666666666543 4663222236665431 232 2 4555 6665 43222
Q ss_pred ccCCCCCCccccccCcccCCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCcc---HHHHHHHHHH
Q 014288 167 CRGQGGSMHMFSKEHNLLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMAAL 243 (427)
Q Consensus 167 ~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~---~~EaLn~A~~ 243 (427)
-+.|......++....|+||++++.|+|+|+. +++..|+|++|||+.++|. .||+.+++..
T Consensus 159 -----~pgHp~~~tpGve~~tG~LGqGls~AvG~A~~-----------~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~ 222 (845)
T 3ahc_A 159 -----IPSHFAPETPGSIHEGGELGYALSHAYGAVMN-----------NPSLFVPCIIGDGEAETGPLATGWQSNKLVNP 222 (845)
T ss_dssp -----BCSSCCTTSTTCSCCCSSTTCHHHHHHHHHTT-----------CTTCEEEEEEETTGGGSHHHHHHGGGGGSCCT
T ss_pred -----CCCCCCCCCCCeecCCCCccchHhHHhhhhhc-----------CCCCeEEEEECCCchhhhcchhhhHHhhhhhh
Confidence 23454433457777889999999999999975 6789999999999999998 8888888888
Q ss_pred cCCC-eEEEEEcCCcccccccccc-ccCchhhcccccCCCcEE-EEeC-C--CHHHHHHHHHHHHHH-----------HH
Q 014288 244 WKLP-IVFVVENNLWAIGMSHLRA-TSDPQIYKKGPAFGMPGF-HVDG-M--DVLKVREVAKEAIER-----------AR 306 (427)
Q Consensus 244 ~~LP-vi~VV~NN~y~is~~~~~~-~~~~d~~~~a~a~G~~~~-~Vdg-~--D~~av~~a~~~A~~~-----------ar 306 (427)
+++. +|.|+++|+|.|+.++... ....++.+++++|||.++ .||| + |+.++.+++.+|++. ++
T Consensus 223 ~~l~nl~~i~D~N~~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~ 302 (845)
T 3ahc_A 223 RTDGIVLPILHLNGYKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQ 302 (845)
T ss_dssp TTSCEEEEEEEECSBSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCCCEEEEEECCCCcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888 8888899999999887543 245789999999999999 9999 8 999999988766643 44
Q ss_pred c--cCCC--EEEEEEEecCC
Q 014288 307 R--GEGP--TLVECETYRFR 322 (427)
Q Consensus 307 ~--~~gP--~lIe~~t~R~~ 322 (427)
+ .++| ++|.++|.+++
T Consensus 303 ~~~~~kP~w~~Ii~rT~kG~ 322 (845)
T 3ahc_A 303 TDDMTRPFYPMLIFRTPKGW 322 (845)
T ss_dssp TCCSSCCCEEEEEEECCTTT
T ss_pred hccCCCCCCeEEEEECcccC
Confidence 4 3689 99999999999
No 43
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.56 E-value=5.2e-16 Score=166.42 Aligned_cols=116 Identities=16% Similarity=0.079 Sum_probs=90.6
Q ss_pred CCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcC-Cccccccc
Q 014288 185 GGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENN-LWAIGMSH 263 (427)
Q Consensus 185 ~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN-~y~is~~~ 263 (427)
.+.+.||+++|.|+|+++| +++.|||++|||+++++ +++|++|.++++|+++||.|| +|++....
T Consensus 452 ~G~~~ig~~l~~AiGaala------------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~lp~~ivv~NN~~~~i~~~~ 517 (604)
T 2x7j_A 452 RGANGIDGVVSSAMGVCEG------------TKAPVTLVIGDLSFYHD--LNGLLAAKKLGIPLTVILVNNDGGGIFSFL 517 (604)
T ss_dssp TTTCCSSSHHHHHHHHHHH------------HTSCEEEEEEHHHHHHT--GGGGHHHHHHCCCEEEEEEECSSCGGGGGS
T ss_pred CCcCCcCcHHHHHHHHHhc------------CCCcEEEEEccHHHHhH--HHHHHHhhhcCCCeEEEEEeCCCCcccccC
Confidence 4567899999999999999 26789999999999987 678999999999987777665 67763211
Q ss_pred -ccc-----------ccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 264 -LRA-----------TSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 264 -~~~-----------~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
..+ ...+|+.+++++||+++++|++ +.++.+ +++++.+.++|+|||+.|+|
T Consensus 518 ~~~q~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~----al~~a~~~~gp~liev~~~~ 580 (604)
T 2x7j_A 518 PQASEKTHFEDLFGTPTGLDFKHAAALYGGTYSCPAS--WDEFKT----AYAPQADKPGLHLIEIKTDR 580 (604)
T ss_dssp GGGSCHHHHHHHTTCCCCCCTHHHHHHTTCEEECCSS--HHHHHH----HCCCCCSSCCEEEEEEECCH
T ss_pred CCCccchhhHhhccCCCCCCHHHHHHHcCCeEEecCC--HHHHHH----HHHHHHhCCCCEEEEEECCc
Confidence 111 1346899999999999999974 556555 55555567899999998864
No 44
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.55 E-value=1.4e-15 Score=161.50 Aligned_cols=115 Identities=19% Similarity=0.173 Sum_probs=88.0
Q ss_pred CCccCCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCC-ccccccc
Q 014288 185 GGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSH 263 (427)
Q Consensus 185 ~~~g~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~-y~is~~~ 263 (427)
+..|++|+ +|.|+|+++| +++.|||++|||+++++ .++|++|.++++|+++||.||+ |++....
T Consensus 414 g~~g~~G~-l~~A~Gaa~a------------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~lpv~ivv~NN~~~~~~~~~ 478 (556)
T 3hww_A 414 GASGIDGL-LSTAAGVQRA------------SGKPTLAIVGDLSALYD--LNALALLRQVSAPLVLIVVNNNGGQIFSLL 478 (556)
T ss_dssp SSCCSSSH-HHHHHHHHHH------------HCCCEEEEEEHHHHHHT--GGGHHHHTTCSSCEEEEEEESCC-------
T ss_pred cccccccH-HHHHHHHHhc------------CCCcEEEEEccHHhhhc--chhhHhhcccCCCcEEEEEECCCCCcccCC
Confidence 45677777 9999999998 36789999999999887 7889999999999988888886 4442210
Q ss_pred -------c---ccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 264 -------L---RATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 264 -------~---~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
. .....+|+.++|++||+++++|++. .++. ++++++++.+||+|||+.|.+
T Consensus 479 ~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~~~--~~l~----~al~~a~~~~gp~liev~~~~ 539 (556)
T 3hww_A 479 PTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNW--QELE----TAFADAWRTPTTTVIEMVVND 539 (556)
T ss_dssp ----------CCCCCCCCSHHHHHHTTCEEECCSSH--HHHH----HHHHHHTTSSSEEEEEEECCS
T ss_pred CCcchhHHHhccCCCCCCHHHHHHHcCCcEEecCCH--HHHH----HHHHHHHhCCCCEEEEEECCc
Confidence 0 0113578999999999999999754 4554 466666778899999998864
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.47 E-value=1.7e-14 Score=153.97 Aligned_cols=111 Identities=21% Similarity=0.202 Sum_probs=80.2
Q ss_pred CCCcchHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCC-ccccccc-ccc
Q 014288 189 FIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNL-WAIGMSH-LRA 266 (427)
Q Consensus 189 ~lG~~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~-y~is~~~-~~~ 266 (427)
.+|+++|.|+|+|+ +++.|||++|||+++++ .++|++|.++++|+++||.||+ |++.... +.+
T Consensus 437 G~~g~l~~AiGaa~-------------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~ 501 (578)
T 3lq1_A 437 GIDGVVSSALGASV-------------VFQPMFLLIGDLSFYHD--MNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQAN 501 (578)
T ss_dssp CSSSHHHHHHHHTT-------------TSSSEEEEEEHHHHHHT--GGGGHHHHHTTCCEEEEEECCC------------
T ss_pred ccccHHHHHHHHhc-------------CCCCEEEEEchHHHHhh--HHHHHhhccCCCCeEEEEEECCcCcccccccccc
Confidence 34457999999963 47789999999999887 7899999999999988888884 5553211 111
Q ss_pred -----------ccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEec
Q 014288 267 -----------TSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYR 320 (427)
Q Consensus 267 -----------~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R 320 (427)
...+|+.++|++||+++++|+ ++.++.+ +++++++.+||+|||+.|.+
T Consensus 502 ~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~----al~~a~~~~gp~liev~~~~ 560 (578)
T 3lq1_A 502 EPKYFESLFGTSTELDFRFAAAFYDADYHEAK--SVDELEE----AIDKASYHKGLDIIEVKTNR 560 (578)
T ss_dssp -------------CCCTHHHHHHTTCEEEECC--SHHHHHH----HHHHHTTSSSEEEEEEC---
T ss_pred ccchhhhhccCCCCCCHHHHHHHcCCceEecC--CHHHHHH----HHHHHHhCCCCEEEEEECCc
Confidence 124689999999999999997 4455555 55566677899999998865
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.11 E-value=1.4e-10 Score=133.04 Aligned_cols=98 Identities=16% Similarity=0.129 Sum_probs=76.2
Q ss_pred CceEEEEeCCC-cccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccc------------------cCchhhcccc
Q 014288 217 DHVTLAFFGDG-TCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRAT------------------SDPQIYKKGP 277 (427)
Q Consensus 217 ~~~vv~~~GDG-a~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~------------------~~~d~~~~a~ 277 (427)
++.|||+.||| +++|| .++|.+|.++++||++||.||+ .+++....+. ..+|+.++|+
T Consensus 953 ~~~Vv~i~GDG~~~~mg--~~eL~ta~~~~~~v~iiVlnN~-~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~ 1029 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIG--YGGLDHVLASGEDVNVFVMDTE-VYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVM 1029 (1231)
T ss_dssp CCEEEEEEEHHHHHTTT--HHHHHHHHHTTCSCEEEEEECS-SBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHH
T ss_pred CCcEEEEeCcHHHHHcc--hHHHHHHHHhCCCeEEEEEECH-HHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHH
Confidence 57899999999 79999 8999999999999999998886 3333221110 1268999999
Q ss_pred cCCCcEEEE-eC-CCHHHHHHHHHHHHHHHHccCCCEEEEEEEecC
Q 014288 278 AFGMPGFHV-DG-MDVLKVREVAKEAIERARRGEGPTLVECETYRF 321 (427)
Q Consensus 278 a~G~~~~~V-dg-~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~ 321 (427)
+||++++.+ .- .++.++.+++++|+ +.+||+|||+.+...
T Consensus 1030 a~G~~~va~~~v~~~~~~l~~al~eAl----~~~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1030 TYGYVYVATVSMGYSKQQFLKVLKEAE----SFPGPSLVIAYATCI 1071 (1231)
T ss_dssp TTSSSEEEEECTTTCHHHHHHHHHHHH----HSSSCEEEEEECCCG
T ss_pred HCCCCEEEEEeccCCHHHHHHHHHHHH----hcCCCEEEEEeecCc
Confidence 999999954 34 48888887666665 568999999987544
No 47
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=93.59 E-value=0.43 Score=50.40 Aligned_cols=106 Identities=17% Similarity=0.087 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccc-cccccCchhh
Q 014288 195 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSH-LRATSDPQIY 273 (427)
Q Consensus 195 p~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~-~~~~~~~d~~ 273 (427)
-+|.|.|.+. +.-.+++|..|=|.++. .-++..|-.-++|+|+|.-+-....-... ..|. .|..
T Consensus 57 ~~A~GyAr~t----------g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q~--~d~~ 121 (589)
T 2pgn_A 57 WMVNGYNYVK----------DRSAAVGAWHCVGNLLL---HAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQQ--VPWQ 121 (589)
T ss_dssp HHHHHHHHHH----------TSCCEEEEEEGGGGGGC---HHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSSC--CCGG
T ss_pred HHHHHHHHHH----------CCCEEEEEecCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCCCCcccc--cChh
Confidence 4456666552 33457888889998876 67899999999999999876542221111 1222 2444
Q ss_pred cccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccC-CCEEEEEEE
Q 014288 274 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECET 318 (427)
Q Consensus 274 ~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~-gP~lIe~~t 318 (427)
. ++.+--...++ .++.++.+.+.+|+..+..++ ||+.|++-.
T Consensus 122 ~-~~~~tk~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 164 (589)
T 2pgn_A 122 S-FTPIARSTQRV--ERLDKVGEAIHEAFRVAEGHPAGPAYVDIPF 164 (589)
T ss_dssp G-GTTTSSEEEEC--CSGGGHHHHHHHHHHHHTSSSCCEEEEEEET
T ss_pred h-ccccEEEEeec--CCHHHHHHHHHHHHHHHhcCCCccEEEEeCH
Confidence 4 55554445555 466788889999999998876 999999843
No 48
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=93.13 E-value=0.27 Score=51.62 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=64.6
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCHHHHHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREV 297 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a 297 (427)
.+++|..|=|.++. .-++..|-..++|+|+|+-+-....-.....|.. .|...+++.+--...++. +++++.+.
T Consensus 68 ~v~~~TsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~Q~~-~d~~~~~~~~tk~~~~v~--~~~~~~~~ 141 (563)
T 2uz1_A 68 GVALVTAGGGFTNA---VTPIANAWLDRTPVLFLTGSGALRDDETNTLQAG-IDQVAMAAPITKWAHRVM--ATEHIPRL 141 (563)
T ss_dssp EEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTSCCTTCC-CCHHHHHGGGCSEEEECC--CGGGHHHH
T ss_pred EEEEEccCccHHHH---HHHHHHHHhcCCCEEEEeCCCCcccCCchhhhhh-ccHHHHhhhhhceEEEcC--CHHHHHHH
Confidence 45555566677765 6678889999999999987654222111112220 356666666665566664 66788889
Q ss_pred HHHHHHHHHccC-CCEEEEEEE
Q 014288 298 AKEAIERARRGE-GPTLVECET 318 (427)
Q Consensus 298 ~~~A~~~ar~~~-gP~lIe~~t 318 (427)
+.+|+..+..++ ||+.|++-.
T Consensus 142 l~~A~~~a~~~~~GPV~l~iP~ 163 (563)
T 2uz1_A 142 VMQAIRAALSAPRGPVLLDLPW 163 (563)
T ss_dssp HHHHHHHHHSSSCCCEEEEEEH
T ss_pred HHHHHHHhcCCCCceEEEEeCH
Confidence 999999998875 999999854
No 49
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=92.98 E-value=0.25 Score=52.17 Aligned_cols=108 Identities=24% Similarity=0.247 Sum_probs=71.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhh
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 273 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~ 273 (427)
.-+|.|.|.+. +.-.+++|..|=|+++. .-++..|-..++|+|+|+-+-....-.....| ..|..
T Consensus 63 a~~A~Gyar~t----------g~p~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~g~~~~Q--~~d~~ 127 (590)
T 1ybh_A 63 VFAAEGYARSS----------GKPGICIATSGPGATNL---VSGLADALLDSVPLVAITGQVPRRMIGTDAFQ--ETPIV 127 (590)
T ss_dssp HHHHHHHHHHH----------SSCEEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTTTCTT--CCCHH
T ss_pred HHHHHHHHHHH----------CCCEEEEeccCchHHHH---HHHHHHHHhhCCCEEEEeCcCCccccCCCccc--ccCHH
Confidence 34566666652 23345666667776664 77889999999999999876532211111112 23555
Q ss_pred cccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccC-CCEEEEEEE
Q 014288 274 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECET 318 (427)
Q Consensus 274 ~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~-gP~lIe~~t 318 (427)
.+++.+--...++ .+++++.+.+.+|++.++.++ ||+.|++-.
T Consensus 128 ~~~~~~~k~~~~v--~~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 128 EVTRSITKHNYLV--MDVEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp HHHGGGSSEEEEC--CCGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred HHHHHHhCeEEec--CCHHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 6666665555566 466789999999999998774 899999843
No 50
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=92.78 E-value=0.24 Score=52.00 Aligned_cols=94 Identities=18% Similarity=0.108 Sum_probs=63.4
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCHHHHHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREV 297 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a 297 (427)
.+++|..|=|.++. .-++..|-.-++|+|+|+-+-....-.....|. .|...+++.+--....+. +++++.+.
T Consensus 75 ~v~~~TsGpG~~N~---~~~l~~A~~~~vPll~itg~~~~~~~~~~~~Q~--~d~~~~~~~~tk~~~~v~--~~~~~~~~ 147 (566)
T 1ozh_A 75 GVALVTSGPGCSNL---ITGMATANSEGDPVVALGGAVKRADKAKQVHQS--MDTVAMFSPVTKYAIEVT--APDALAEV 147 (566)
T ss_dssp EEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTTC------C--CCHHHHHGGGCSEEEECC--SGGGHHHH
T ss_pred EEEEEccChHHHHH---HHHHHHHHhcCCCEEEEeCCCccccCCCCcccc--cCHHHHHHHHhheEEEcC--CHHHHHHH
Confidence 45555567777765 678888889999999998765322111111122 356666666665666664 66678888
Q ss_pred HHHHHHHHHccC-CCEEEEEEE
Q 014288 298 AKEAIERARRGE-GPTLVECET 318 (427)
Q Consensus 298 ~~~A~~~ar~~~-gP~lIe~~t 318 (427)
+.+|+..+..++ ||+.|++-.
T Consensus 148 i~~A~~~A~~~r~GPV~l~iP~ 169 (566)
T 1ozh_A 148 VSNAFRAAEQGRPGSAFVSLPQ 169 (566)
T ss_dssp HHHHHHHHHSSSCCEEEEEEEH
T ss_pred HHHHHHHHhcCCCCeEEEEeCh
Confidence 999999888874 999999854
No 51
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=92.72 E-value=0.23 Score=52.22 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=64.7
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccccc-ccccccCchhhcccccCCCcEEEEeCCCHHHHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMS-HLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVRE 296 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~-~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~ 296 (427)
.+++|..|=|.++. .-++..|..-++|+|+|+-+.....-.. ...|. .|...+++.+--....+. ++.++.+
T Consensus 75 ~v~~~TsGpG~~N~---~~~v~~A~~~~~Pll~itg~~~~~~~~~~~~~Q~--~d~~~~~~~~~k~~~~v~--~~~~~~~ 147 (573)
T 2iht_A 75 QACWATLGPGMTNL---STGIATSVLDRSPVIALAAQSESHDIFPNDTHQC--LDSVAIVAPMSKYAVELQ--RPHEITD 147 (573)
T ss_dssp EEEEECTTHHHHHH---HHHHHHHHHHTCCEEEEEEESCGGGCCTTTSTTC--CCHHHHHGGGSSEEEECC--SGGGHHH
T ss_pred EEEEEccCchHHHH---HHHHHHHHhhCCCEEEEcccCcccccCCcCcccc--CCHHHHHHhHhhEEEEcC--CHHHHHH
Confidence 45555567666654 6788889999999999987654222111 11222 355666666655566664 6667888
Q ss_pred HHHHHHHHHHccC-CCEEEEEEEe
Q 014288 297 VAKEAIERARRGE-GPTLVECETY 319 (427)
Q Consensus 297 a~~~A~~~ar~~~-gP~lIe~~t~ 319 (427)
.+.+|++.+..++ ||+.|++-..
T Consensus 148 ~i~~A~~~A~~~~~GPV~l~iP~d 171 (573)
T 2iht_A 148 LVDSAVNAAMTEPVGPSFISLPVD 171 (573)
T ss_dssp HHHHHHHHHTBSSCCCEEEEEEHH
T ss_pred HHHHHHHHHhcCCCceEEEEecch
Confidence 9999999998875 9999999543
No 52
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=92.69 E-value=0.33 Score=50.76 Aligned_cols=94 Identities=14% Similarity=0.028 Sum_probs=64.7
Q ss_pred CceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcc-ccccccccccCchhhcccccCCCcEEEEeCCCHHHHH
Q 014288 217 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVR 295 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~-is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~ 295 (427)
-.+++|..|=|+++. .-++..|-.-+.|+|+|.-+-... ++. ...| ..|...+++.+--....+. +++++.
T Consensus 67 ~~v~~~TsGpG~~N~---~~gi~~A~~~~vPvl~itg~~~~~~~~~-~~~Q--~~d~~~~~~~~tk~~~~v~--~~~~~~ 138 (549)
T 3eya_A 67 LAVCAGSCGPGNLHL---INGLFDCHRNHVPVLAIAAHIPSSEIGS-GYFQ--ETHPQELFRECSHYCELVS--SPEQIP 138 (549)
T ss_dssp CEEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEESCGGGTTS-CCTT--CCCHHHHTSTTCSEEEECC--SGGGHH
T ss_pred CEEEEeCCCCcHhhh---HHHHHHHHhhCCCEEEEeCCCchhhcCC-CCCC--ccCHHHHHhhhhheEEEeC--CHHHHH
Confidence 345666668777775 678999999999999998654311 111 1112 2355666666655556664 566788
Q ss_pred HHHHHHHHHHHccCCCEEEEEEE
Q 014288 296 EVAKEAIERARRGEGPTLVECET 318 (427)
Q Consensus 296 ~a~~~A~~~ar~~~gP~lIe~~t 318 (427)
+.+.+|+..+....||+.|++-.
T Consensus 139 ~~i~~A~~~A~~~~GPV~l~iP~ 161 (549)
T 3eya_A 139 QVLAIAMRKAVLNRGVSVVVLPG 161 (549)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEH
T ss_pred HHHHHHHHHHhhCCCCEEEEeCh
Confidence 88899999888888999999843
No 53
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=92.39 E-value=0.54 Score=49.30 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccc-cccc--ccc---c
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSH--LRA---T 267 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~i-s~~~--~~~---~ 267 (427)
.-+|.|.|.+. + -.++++..|=|+++. .-++..|-..++|+|+|+-+-.... +... ... .
T Consensus 54 a~~A~Gyar~t----------g-~~v~~~TsGpG~~N~---~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~ 119 (568)
T 2wvg_A 54 GFSAEGYARAK----------G-AAAAVVTYSVGALSA---FDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKT 119 (568)
T ss_dssp HHHHHHHHHHH----------S-CEEEEECTTTTHHHH---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSS
T ss_pred HHHHHHHHHhh----------C-CeEEEEeCCCCHHHH---HHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeecccc
Confidence 34566666552 3 345666667777764 6678889999999999987654221 1110 000 0
Q ss_pred cCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEe
Q 014288 268 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 319 (427)
Q Consensus 268 ~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~ 319 (427)
...|...+++.+--....+. +++++.+.+.+|++.+..++||+.|++-..
T Consensus 120 ~~~d~~~~~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~d 169 (568)
T 2wvg_A 120 DYHYQLEMAKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIACN 169 (568)
T ss_dssp CCCHHHHHHTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred chHHHHHHHHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 11256667777766677775 556777888888888888889999998543
No 54
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=91.97 E-value=0.17 Score=51.07 Aligned_cols=108 Identities=16% Similarity=0.121 Sum_probs=61.5
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccc--cccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGM--SHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~--~~~~~~~~~ 270 (427)
.+.+|+|++++ ..+.++...|.|-..+ .+.|..++..++|+|+++-+.. +.++ +...+.+ .
T Consensus 76 a~~~a~Gaa~a------------G~r~~~~ts~~G~~~~---~d~l~~aa~~~~P~Vi~~~~~~-~~~~g~~~~~~~s-d 138 (395)
T 1yd7_A 76 SIAAAIGASWA------------GAKAMTATSGPGFSLM---QENIGYAVMTETPVVIVDVQRS-GPSTGQPTLPAQG-D 138 (395)
T ss_dssp HHHHHHHHHHT------------TCCEEEEEETTHHHHH---TTTCC----CCCCEEEEEEC------------------
T ss_pred HHHHHHHHHHh------------CCcEEEEeCchHHHHH---HHHHHHHHhcCCCEEEEEeeCC-CCCCCCCcccchh-H
Confidence 46677888877 3456777888887543 4455566788999888887754 2221 1111111 1
Q ss_pred hhhcccc---cCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEe
Q 014288 271 QIYKKGP---AFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETY 319 (427)
Q Consensus 271 d~~~~a~---a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~ 319 (427)
.+..+.. .+|++++.. .++.++.+.+..|++.+.+.+.|+++....+
T Consensus 139 ~~~~~~~~~g~~g~~vl~p--~~~qea~~l~~~A~~lA~~~~~PVi~~~~~~ 188 (395)
T 1yd7_A 139 IMQAIWGTHGDHSLIVLSP--STVQEAFDFTIRAFNLSEKYRTPVILLTDAE 188 (395)
T ss_dssp ----------CCCCEEECC--CSHHHHHHHHHHHHHHHHHHTSEEEEEECHH
T ss_pred HHHHHhccCCCcceEEEeC--CCHHHHHHHHHHHHHHHHHHCCCEEEEcchh
Confidence 1111222 235655544 5788999999999999988889999887543
No 55
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=91.85 E-value=0.44 Score=51.38 Aligned_cols=106 Identities=22% Similarity=0.138 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhc
Q 014288 195 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYK 274 (427)
Q Consensus 195 p~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~ 274 (427)
-+|.|.|.+. +.-.+++|..|=|+++. .-++..|-.-++|+|+|+-+-....-.....| ..|...
T Consensus 134 ~aAdGyAr~t----------Gkpgvv~~TsGpG~~N~---~~gia~A~~d~vPllvItG~~~~~~~g~~a~Q--~~Dq~~ 198 (677)
T 1t9b_A 134 HMAEGYARAS----------GKPGVVLVTSGPGATNV---VTPMADAFADGIPMVVFTGQVPTSAIGTDAFQ--EADVVG 198 (677)
T ss_dssp HHHHHHHHHH----------SSCEEEEECSTHHHHTT---HHHHHHHHHHTCCEEEEEEECCTTTTTSCCTT--CCCHHH
T ss_pred HHHHHHHHHH----------CCCEEEEECCChHHHHH---HHHHHHHHHcCCCEEEEeCCCChhhcCCCCcc--ccCHHH
Confidence 4566666652 23346666677777765 67888899999999999876432111111112 234555
Q ss_pred ccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHcc-CCCEEEEEE
Q 014288 275 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRG-EGPTLVECE 317 (427)
Q Consensus 275 ~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~-~gP~lIe~~ 317 (427)
+++.+--....|. ++.++.+.+.+|++.+..+ .||++|++-
T Consensus 199 i~~~~tk~~~~v~--~~~~i~~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 199 ISRSCTKWNVMVK--SVEELPLRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp HTGGGSSEEEECC--SGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred HhhhheeEEEEcC--CHHHHHHHHHHHHHHHhhCCCceEEEEcC
Confidence 6665555555664 6778889999999999887 599999996
No 56
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=91.46 E-value=0.61 Score=49.36 Aligned_cols=92 Identities=16% Similarity=0.095 Sum_probs=61.5
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCc-cccccccccccCchhhcccccCCCcEEEEeCCCHHHHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLW-AIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVRE 296 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y-~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~ 296 (427)
.+++|..|=|+++. .-++..|-.-+.|+|+|+-+-.. .++.. ..| ..|...+++.+-....+|. ++.++.+
T Consensus 77 gv~~~TsGpG~~N~---~~gia~A~~~~vPvl~itG~~~~~~~~~~-~~Q--~~d~~~~~~~~tk~~~~v~--~~~~~~~ 148 (603)
T 4feg_A 77 GVCFGSAGPGGTHL---MNGLYDAREDHVPVLALIGQFGTTGMNMD-TFQ--EMNENPIYADVADYNVTAV--NAATLPH 148 (603)
T ss_dssp EEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTTTTSC-CTT--CCCCGGGGTTTCSEEEECC--CSTTHHH
T ss_pred eEEEecCCchHHHH---HHHHHHHHHcCCCEEEEecCCcccccCCC-ccc--cccHHHHhhhhceEEEEcC--CHHHHHH
Confidence 45666667777775 67889999999999999865321 11111 112 1345566666655566664 4446777
Q ss_pred HHHHHHHHHHccCCCEEEEEE
Q 014288 297 VAKEAIERARRGEGPTLVECE 317 (427)
Q Consensus 297 a~~~A~~~ar~~~gP~lIe~~ 317 (427)
.+.+|+..+....||+.|++-
T Consensus 149 ~i~~A~~~A~~~~GPV~l~iP 169 (603)
T 4feg_A 149 VIDEAIRRAYAHQGVAVVQIP 169 (603)
T ss_dssp HHHHHHHHHHHHTSEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEeC
Confidence 788888887777899999984
No 57
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=91.39 E-value=0.81 Score=47.91 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccc-cccc--ccc---c
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSH--LRA---T 267 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~i-s~~~--~~~---~ 267 (427)
.-+|.|.|.+. + -.++++..|=|.++. .-++..|-..++|+|+|+-+-.... +... ... .
T Consensus 54 a~~A~Gyar~t----------g-~~v~~~TsGpG~~N~---~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~ 119 (566)
T 2vbi_A 54 GFSAEGYARSN----------G-AAAAVVTFSVGAISA---MNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKT 119 (566)
T ss_dssp HHHHHHHHHHH----------S-CEEEEECTTTTHHHH---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSS
T ss_pred HHHHHHHHhhc----------C-CeEEEEeCCCCHHHH---HHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCc
Confidence 34566666551 3 344555567777764 6678889999999999987654221 1110 000 0
Q ss_pred cCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEE
Q 014288 268 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECET 318 (427)
Q Consensus 268 ~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t 318 (427)
...|...+++.+--....+. ++.++.+.+.+|+..+..++||+.|++-.
T Consensus 120 ~~~d~~~~~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~ 168 (566)
T 2vbi_A 120 DYSYQLEMARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIAC 168 (566)
T ss_dssp CCTHHHHHHHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred chHHHHHHHhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 11255667777766667775 34466677888888888888999999854
No 58
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=91.28 E-value=0.46 Score=49.91 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=60.1
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcc-ccccc--cccccCch-hhcccccCCCcEEEEeCCCHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSH--LRATSDPQ-IYKKGPAFGMPGFHVDGMDVLK 293 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~-is~~~--~~~~~~~d-~~~~a~a~G~~~~~Vdg~D~~a 293 (427)
.+++|..|=|.++. .-++..|..-++|+|+|+-+-... ++... ..+....+ ...+++.+--...++. ++.+
T Consensus 86 ~v~~~TsGpG~~N~---~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~~~~k~~~~v~--~~~~ 160 (565)
T 2nxw_A 86 GVAAVTYGAGAFNM---VNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFKEITVAQARLD--DPAK 160 (565)
T ss_dssp EEEEECTTHHHHTT---HHHHHHHHHTTCCEEEEEEECCTTCC--CCCC-------CHHHHHHTTSCSCEEECC--CTTT
T ss_pred eEEEECCCCCHHHH---HHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHHhhheEEEEeC--CHHH
Confidence 35555557777665 678889999999999998764311 11110 00111122 4556666655666664 4456
Q ss_pred HHHHHHHHHHHHHccCCCEEEEEEE
Q 014288 294 VREVAKEAIERARRGEGPTLVECET 318 (427)
Q Consensus 294 v~~a~~~A~~~ar~~~gP~lIe~~t 318 (427)
+.+.+.+|+..+..+.||+.|++-.
T Consensus 161 ~~~~i~~A~~~A~~~~GPV~l~iP~ 185 (565)
T 2nxw_A 161 APAEIARVLGAARAQSRPVYLEIPR 185 (565)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCh
Confidence 6677788888887778999999964
No 59
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=90.55 E-value=0.37 Score=50.90 Aligned_cols=92 Identities=15% Similarity=0.010 Sum_probs=61.7
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCHHHHHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREV 297 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a 297 (427)
.++++..|=|.++. .-++..|-..++|+|+|+-+-..........|. .|...+++.+--....+ .++.++.+.
T Consensus 70 ~v~~~tsGpG~~N~---~~gl~~A~~~~vPll~Itg~~p~~~~g~~~~Q~--~d~~~~~~~~tk~~~~v--~~~~~~~~~ 142 (590)
T 1v5e_A 70 GVTVGSGGPGASHL---INGLYDAAMDNIPVVAILGSRPQRELNMDAFQE--LNQNPMYDHIAVYNRRV--AYAEQLPKL 142 (590)
T ss_dssp CEEEECTTHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGTTTTCTTC--CCCHHHHHTTCSEEEEC--CSGGGHHHH
T ss_pred EEEEeCcChHHHHH---HHHHHHHHhcCCCEEEEcCCCCcccCCCCcccc--cCHHHHHHhhccEEEEe--CCHHHHHHH
Confidence 35555557676664 667888889999999998775422211111222 34555566555445566 466788889
Q ss_pred HHHHHHHHHccC-CCEEEEEE
Q 014288 298 AKEAIERARRGE-GPTLVECE 317 (427)
Q Consensus 298 ~~~A~~~ar~~~-gP~lIe~~ 317 (427)
+++|++.+..++ ||+.| +-
T Consensus 143 i~~A~~~A~~~~~GPV~l-iP 162 (590)
T 1v5e_A 143 VDEAARMAIAKRGVAVLE-VP 162 (590)
T ss_dssp HHHHHHHHHHTTSEEEEE-EE
T ss_pred HHHHHHHHhcCCCceEEE-Ec
Confidence 999999998887 99999 63
No 60
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=90.53 E-value=0.65 Score=48.19 Aligned_cols=110 Identities=16% Similarity=0.074 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhh
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIY 273 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~ 273 (427)
.-+|.|.|.+. +.-.+++|..|=|.++. .-++..|...++|+|+|+-+-....-.....|. ..|..
T Consensus 51 a~~A~Gyar~t----------g~~~v~~~tsGpG~~N~---~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~-~~d~~ 116 (528)
T 1q6z_A 51 VGIADGYAQAS----------RKPAFINLHSAAGTGNA---MGALSNAWNSHSPLIVTAGQQTRAMIGVEALLT-NVDAA 116 (528)
T ss_dssp HHHHHHHHHHH----------TSCEEEEEEHHHHHHHT---HHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTC-CTTGG
T ss_pred HHHHHHHHHHh----------CCCEEEEEcCChHHHHH---HHHHHHHhhcCCCEEEEeCCCcccccCCCcccc-cccHH
Confidence 34566666652 23345666678888764 667888999999999998764321111111121 12556
Q ss_pred cccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccC-CCEEEEEEEe
Q 014288 274 KKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGE-GPTLVECETY 319 (427)
Q Consensus 274 ~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~-gP~lIe~~t~ 319 (427)
.+++.+--...++ .+++++.+.+.+|+..+..++ ||+.|++-..
T Consensus 117 ~~~~~~~k~~~~v--~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 117 NLPRPLVKWSYEP--ASAAEVPHAMSRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp GSSTTSCSCEECC--SSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGG
T ss_pred HHHHHhhHhhhcC--CCHHHHHHHHHHHHHHHhcCCCCcEEEEechh
Confidence 6666554445555 356677788899999888764 7999998553
No 61
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=90.05 E-value=0.98 Score=47.82 Aligned_cols=93 Identities=20% Similarity=0.167 Sum_probs=62.9
Q ss_pred eEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCHHHHHHHH
Q 014288 219 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVA 298 (427)
Q Consensus 219 ~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~ 298 (427)
++++..|=|+++. .-++..|..-+.|+|+|+-+-..........| ..|...+++.+--....+. ++.++...+
T Consensus 94 v~~~TsGpG~~N~---~~~l~~A~~~~vPlvvItg~~p~~~~~~~~~Q--~~d~~~~~~~~tk~~~~v~--~~~~i~~~l 166 (616)
T 2pan_A 94 VCLGTSGPAGTDM---ITALYSASADSIPILCITGQAPRARLHKEDFQ--AVDIEAIAKPVSKMAVTVR--EAALVPRVL 166 (616)
T ss_dssp EEEECSTHHHHTS---HHHHHHHHHTTCCEEEEEEECCGGGTTTTCTT--CCCHHHHHGGGSSEEEECC--SGGGHHHHH
T ss_pred EEEeCCCchHHHH---HHHHHHHHhcCCCEEEEecCCcccccCccccc--ccCHHHHHHHHHHhhcccC--CHHHHHHHH
Confidence 4445567776665 67888999999999999876542221111112 2355566666655556664 567888899
Q ss_pred HHHHHHHHcc-CCCEEEEEEE
Q 014288 299 KEAIERARRG-EGPTLVECET 318 (427)
Q Consensus 299 ~~A~~~ar~~-~gP~lIe~~t 318 (427)
++|++.+..+ .||+.|++-.
T Consensus 167 ~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 167 QQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp HHHHHHHHSSSCCCEEEEEEH
T ss_pred HHHHHHHhcCCCceEEEEcch
Confidence 9999988876 5999999843
No 62
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=89.64 E-value=1.1 Score=47.41 Aligned_cols=98 Identities=13% Similarity=0.046 Sum_probs=63.1
Q ss_pred CceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCCCH-----
Q 014288 217 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGMDV----- 291 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~----- 291 (427)
-.+++|..|=|+++. .-++..|-.-++|+|+|.-+-....-.....| ..|...+++.+--....|...+-
T Consensus 95 pgv~~~TsGpG~~N~---~~gia~A~~~~vPlv~ItG~~~~~~~g~~~~Q--~~d~~~~~~~~tk~~~~v~~~~~~~~~~ 169 (604)
T 2x7j_A 95 PVLLICTSGTAAANF---YPAVVEAHYSRVPIIVLTADRPHELREVGAPQ--AINQHFLFGNFVKFFTDSALPEESPQML 169 (604)
T ss_dssp CEEEEECSSHHHHTT---HHHHHHHHHHTCCEEEEEEECCGGGSSSCCTT--CCCCTTTTGGGSSCEEECCCCCCSHHHH
T ss_pred CEEEEECChhHHHHH---HHHHHHHhhcCCCEEEEeCCCCHHHhCCCCCC--cCcHHHHhhhheeeeeecCCCcccchhH
Confidence 345666667777765 67888999999999999876432211111112 23555566666555666653320
Q ss_pred HHHHHHHHHHHHHHHcc-CCCEEEEEEEe
Q 014288 292 LKVREVAKEAIERARRG-EGPTLVECETY 319 (427)
Q Consensus 292 ~av~~a~~~A~~~ar~~-~gP~lIe~~t~ 319 (427)
..+.+.+++|+..+..+ .||+.|++-..
T Consensus 170 ~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 170 RYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp HHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 12777888899988874 69999999653
No 63
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=88.65 E-value=0.59 Score=48.93 Aligned_cols=94 Identities=15% Similarity=0.210 Sum_probs=62.4
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccc-cc-cccccccCchhhcccccCCCcEEEEeCCCHHHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GM-SHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVR 295 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~i-s~-~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~ 295 (427)
.+++|..|=|.++. .-++..|-.-++|+|+|+-+-.... +. ....|. .|...+++.+--....|. ++.++.
T Consensus 72 gv~~~TsGpG~~N~---~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~--~dq~~~~~~~tk~~~~v~--~~~~~~ 144 (564)
T 2q28_A 72 GICLTVSAPGFLNG---LTALANATVNGFPMIMISGSSDRAIVDLQQGDYEE--LDQMNAAKPYAKAAFRVN--QPQDLG 144 (564)
T ss_dssp EEEEECSHHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTTC--CCHHHHHGGGSSEEEECC--SGGGHH
T ss_pred EEEEEccCchHHHH---HHHHHHHHhcCCCEEEEeCCCCccccCCCCCcccc--ccHHHHHHHhhheeeecC--CHHHHH
Confidence 45566666666654 6788889999999999987653221 10 011122 345556666655566664 566788
Q ss_pred HHHHHHHHHHHcc-CCCEEEEEEE
Q 014288 296 EVAKEAIERARRG-EGPTLVECET 318 (427)
Q Consensus 296 ~a~~~A~~~ar~~-~gP~lIe~~t 318 (427)
+.+.+|+..+..+ .||+.|++-.
T Consensus 145 ~~i~~A~~~A~~~~~GPV~l~iP~ 168 (564)
T 2q28_A 145 IALARAIRVSVSGRPGGVYLDLPA 168 (564)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred HHHHHHHHHHhcCCCceEEEEcCH
Confidence 8899999999884 5999999843
No 64
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=88.64 E-value=1.7 Score=45.68 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccc-cccccccccCchhh
Q 014288 195 PVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GMSHLRATSDPQIY 273 (427)
Q Consensus 195 p~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~i-s~~~~~~~~~~d~~ 273 (427)
-+|.|.|.+. +.-.+++|..|=|++|. .-++..|-.-+.|+|+|.-+-.... +.. ..| ..|..
T Consensus 63 ~aAdGyAr~t----------G~pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~p~~~~g~~-~~Q--e~d~~ 126 (578)
T 3lq1_A 63 FFALGLAKAS----------KRPVVLLCTSGTAAANY---FPAVAEANLSQIPLIVLTADRPHELRNVG-APQ--AMDQL 126 (578)
T ss_dssp HHHHHHHHHH----------CCCEEEEECSSHHHHTT---HHHHHHHHHTTCCEEEEEEECCGGGTTSS-CTT--CCCCT
T ss_pred HHHHHHHHhh----------CCCEEEEECCchhhhhh---hHHHHHHHhcCCCeEEEeCCCCHHhhcCC-CCC--CcCHh
Confidence 3456666652 23355666668887775 6788999999999999986532111 111 112 12455
Q ss_pred cccccCCCcEEEEeC-CCHH----HHHHHHHHHHHHHHcc-CCCEEEEEEE
Q 014288 274 KKGPAFGMPGFHVDG-MDVL----KVREVAKEAIERARRG-EGPTLVECET 318 (427)
Q Consensus 274 ~~a~a~G~~~~~Vdg-~D~~----av~~a~~~A~~~ar~~-~gP~lIe~~t 318 (427)
.+++.+--....|.. .+.. .+..++++|+..|..+ .||+.|++-.
T Consensus 127 ~~~~~~tk~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 127 HLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp TTTGGGSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred hHHhhheeeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 555555445556643 3322 2345778888888876 6999999964
No 65
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=88.64 E-value=0.62 Score=48.82 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=62.1
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccc-cc-cccccccCchhhcccccCCCcEEEEeCCCHHHHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAI-GM-SHLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVR 295 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~i-s~-~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~ 295 (427)
.+++|..|=|.++. .-++..|-.-++|+|+|+-+-.... +. ....|. .|...+++.+--....+. ++.++.
T Consensus 74 gv~~~TsGpG~~N~---~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~--~dq~~~~~~~tk~~~~v~--~~~~~~ 146 (568)
T 2c31_A 74 GVCLTVSAPGFLNG---VTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEE--MDQMNVARPHCKASFRIN--SIKDIP 146 (568)
T ss_dssp EEEEECSHHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTC--CCHHHHSGGGSSEEEECC--SGGGHH
T ss_pred EEEEEcCCccHHHH---HHHHHHHHhcCCCEEEEccCCCccccCCCCCcccc--cCHHHHHHhhhheeeecC--CHHHHH
Confidence 45666666666654 6788899999999999987643211 10 011122 345556666655556664 566788
Q ss_pred HHHHHHHHHHHcc-CCCEEEEEE
Q 014288 296 EVAKEAIERARRG-EGPTLVECE 317 (427)
Q Consensus 296 ~a~~~A~~~ar~~-~gP~lIe~~ 317 (427)
+.+.+|+..+..+ .||+.|++-
T Consensus 147 ~~i~~A~~~A~~~~~GPV~l~iP 169 (568)
T 2c31_A 147 IGIARAVRTAVSGRPGGVYVDLP 169 (568)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEE
T ss_pred HHHHHHHHHhcCCCCceEEEeCC
Confidence 8899999999874 699999984
No 66
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=88.29 E-value=2.6 Score=45.25 Aligned_cols=102 Identities=20% Similarity=0.111 Sum_probs=62.2
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
.+++|.|+|+. +.-+++++.+...+.. ..+++..++..++||++++.+.+++.+ .+++ .+..
T Consensus 414 ~v~~a~GlA~~-----------gG~~P~~~tf~~F~~~---~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tH--q~~e 477 (669)
T 2r8o_A 414 MTAIANGISLH-----------GGFLPYTSTFLMFVEY---ARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTH--QPVE 477 (669)
T ss_dssp HHHHHHHHHHH-----------SSCEEEEEEEGGGGGT---THHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT--CCSS
T ss_pred HHHHHHHHHHc-----------CCCeEEEeehHHHHHH---HHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCcc--CCHH
Confidence 34667777765 3345566666554432 267788899999999999988776644 2222 2233
Q ss_pred hhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+++-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 478 dla~lr---~iP~l~V~~Pad~~E~~~~l~~a~~---~~~~Pv~i~~ 518 (669)
T 2r8o_A 478 QVASLR---VTPNMSTWRPCDQVESAVAWKYGVE---RQDGPTALIL 518 (669)
T ss_dssp HHHHHH---TSTTCEEECCSSHHHHHHHHHHHHH---CSSSCEEEEC
T ss_pred HHHHhc---CCCCCEEEecCCHHHHHHHHHHHHH---hCCCcEEEEe
Confidence 433332 3444433 34577787777766653 2378999853
No 67
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=87.95 E-value=2.5 Score=45.34 Aligned_cols=102 Identities=21% Similarity=0.174 Sum_probs=62.6
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
.+++|.|+|+. +.-++++..+.-.+. -.++++..++..++||++++.+.+++.+ .+++ | ...
T Consensus 409 ~~~~a~GlA~~-----------Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH-q-~~e 472 (651)
T 2e6k_A 409 MGAILNGLNLH-----------GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTH-Q-PVE 472 (651)
T ss_dssp HHHHHHHHHHH-----------SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSS
T ss_pred HHHHHHHHHHc-----------CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCcc-c-cHH
Confidence 34577787776 424556665533332 1367788999999999999988886654 2222 2 233
Q ss_pred hhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
|++-+. .+|+++| .-.|+.++...++.|++. .++|++|-.
T Consensus 473 dla~lr---~iP~l~V~~Pad~~E~~~~l~~A~~~---~~~Pv~i~~ 513 (651)
T 2e6k_A 473 HLMSLR---AMPNLFVIRPADAYETFYAWLVALRR---KEGPTALVL 513 (651)
T ss_dssp HHHHHH---TSTTCEEECCSSHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred HHHHhc---CCCCcEEEecCCHHHHHHHHHHHHHc---CCCCEEEEE
Confidence 443322 3444433 345777888877766642 268998865
No 68
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=87.66 E-value=1.7 Score=46.26 Aligned_cols=103 Identities=16% Similarity=0.087 Sum_probs=62.4
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchh
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 272 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~ 272 (427)
.+.+|+|+|++ +...++++.++++..- .++.+.+++..++|+++++.+-+++.+..-..+.+..++
T Consensus 367 ~v~~a~G~A~~-----------G~~~~~~~~f~~Fl~~---a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~~~ed~ 432 (616)
T 3mos_A 367 MVSIAVGCATR-----------NRTVPFCSTFAAFFTR---AFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDL 432 (616)
T ss_dssp HHHHHHHHHGG-----------GCCEEEEEEEGGGGGG---GHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGCBSSHH
T ss_pred HHHHHHHHHHc-----------CCCCEEEEehHHHHHH---HHHHHHHHHHhCCCeEEEEECCCccccCCCCcccCHHHH
Confidence 34556666665 3234667789998742 378888889999999998877665444211111223333
Q ss_pred hcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 273 YKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 273 ~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+-+. .+|++.| .-.|+.++...++.| ...++|++|-.
T Consensus 433 a~l~---~iP~l~V~~P~d~~e~~~~l~~a----~~~~gp~~ir~ 470 (616)
T 3mos_A 433 AMFR---SVPTSTVFYPSDGVATEKAVELA----ANTKGICFIRT 470 (616)
T ss_dssp HHHH---TSTTEEEECCCSHHHHHHHHHHH----HTCCSEEEEEC
T ss_pred HHhc---CCCCCEEEecCCHHHHHHHHHHH----HhcCCCEEEEE
Confidence 3322 4566654 345777777765544 45579987743
No 69
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=86.09 E-value=2.8 Score=45.05 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=61.6
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
.+++|.|+|+. +.-++++..+.+-... ..+.+.+++..++||+++....+++.+ .+++ .+..
T Consensus 415 ~v~~a~GlA~~-----------gG~~P~~~tf~~F~~~---~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~TH--q~~e 478 (663)
T 3kom_A 415 MAAIMNGLSLY-----------GGIKPYGGTFLVFSDY---SRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTH--QPIE 478 (663)
T ss_dssp HHHHHHHHHHH-----------SSCEEEEEEEGGGHHH---HHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT--CCSS
T ss_pred HHHHHHHHHHc-----------CCCEEEEEehHHHHHH---HHHHHHHHHhcCCCEEEEEeCCccccCCCCCCc--CCHH
Confidence 45667777765 3455666666554421 256778889999999999877775544 3332 2233
Q ss_pred hhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEE
Q 014288 271 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 315 (427)
Q Consensus 271 d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe 315 (427)
+++-+. .+|+++| .-.|+.+...+++.|++ ..++|++|-
T Consensus 479 d~a~lr---~iPnl~V~~Pad~~e~~~~l~~A~~---~~~~Pv~ir 518 (663)
T 3kom_A 479 HVPSLR---LIPNLSVWRPADTIETMIAWKEAVK---SKDTPSVMV 518 (663)
T ss_dssp HHHHHH---TSTTCEEECCCSHHHHHHHHHHHHH---CSSCCEEEE
T ss_pred HHHHHh---cCCCcEEEeeCCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 433322 4555544 33477777776666652 268999884
No 70
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=85.54 E-value=1.3 Score=46.35 Aligned_cols=96 Identities=8% Similarity=0.056 Sum_probs=60.6
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc---ccccc---cccCchhhcccccCCCcEEEEeCCCH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG---MSHLR---ATSDPQIYKKGPAFGMPGFHVDGMDV 291 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is---~~~~~---~~~~~d~~~~a~a~G~~~~~Vdg~D~ 291 (427)
.+++|..|=|+++. .-++..|-.-++|+|+|+-+-....- ...+. .....+...+++.+--....+. ++
T Consensus 68 ~v~~~TsGpG~~N~---~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~~~~~~k~~~~v~--~~ 142 (563)
T 2vk8_A 68 SCIITTFGVGELSA---LNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMSANISETTAMIT--DI 142 (563)
T ss_dssp EEEEEETTHHHHHH---HHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHHHHTTCSEEEECC--CT
T ss_pred cEEEEcCCCcHHHH---HHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHHHhhhhEEEEEEeC--CH
Confidence 35666668887763 66788899999999999876432110 00000 0011134556666665566664 44
Q ss_pred HHHHHHHHHHHHHHHccCCCEEEEEEE
Q 014288 292 LKVREVAKEAIERARRGEGPTLVECET 318 (427)
Q Consensus 292 ~av~~a~~~A~~~ar~~~gP~lIe~~t 318 (427)
.++.+.+.+|+..+..++||+.|++-.
T Consensus 143 ~~~~~~i~~A~~~A~~~~GPV~l~iP~ 169 (563)
T 2vk8_A 143 ATAPAEIDRCIRTTYVTQRPVYLGLPA 169 (563)
T ss_dssp TTHHHHHHHHHHHHHHHTSCEEEEEET
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 466677777887777777999999854
No 71
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=84.99 E-value=2.9 Score=44.98 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCc-eEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDH-VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~-~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
+++|.|+|+. +.-+ +++..+.+-+. ...+++..++..++||+|++...+++.+ .+++ | +..
T Consensus 422 vg~a~GlA~~-----------Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tH-q-~~e 485 (680)
T 1gpu_A 422 GAIMNGISAF-----------GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTH-Q-PIE 485 (680)
T ss_dssp HHHHHHHHHH-----------CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSS
T ss_pred HHHHHHHHhc-----------CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCcc-C-CHH
Confidence 4577787776 4234 45555533322 2367788899999999999987776654 2332 2 233
Q ss_pred hhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+++-+. .+|+++| .-.|+.+....++.|++ ..++|++|-.
T Consensus 486 dla~lr---~iP~l~V~~Pad~~e~~~~l~~A~~---~~~~Pv~i~~ 526 (680)
T 1gpu_A 486 TLAHFR---SLPNIQVWRPADGNEVSAAYKNSLE---SKHTPSIIAL 526 (680)
T ss_dssp HHHHHH---TSSSCEEECCCSHHHHHHHHHHHHH---CSSCCEEEEC
T ss_pred HHHHhc---CCCCCEEEecCCHHHHHHHHHHHHH---hCCCcEEEEe
Confidence 333322 3455544 33577787777666653 2378999843
No 72
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=84.67 E-value=3 Score=44.59 Aligned_cols=101 Identities=16% Similarity=0.061 Sum_probs=61.7
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
.+++|.|+|+. +.-++++.++.+-+ + ...+.+.+++..++||+|+....+++.+ .+++ .+..
T Consensus 394 ~v~~a~GlA~~-----------gG~~P~~~~f~~F~--~-~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~TH--q~~e 457 (632)
T 3l84_A 394 MAAINNAFARY-----------GIFLPFSATFFIFS--E-YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTH--QPIE 457 (632)
T ss_dssp HHHHHHHHHHH-----------SSCEEEEEEEGGGH--H-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGG--SCSS
T ss_pred HHHHHHHHHHc-----------CCCEEEEEecHHHH--H-HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCC--CCHh
Confidence 34667777765 33456666655433 2 2356777889999999999887775543 3332 2233
Q ss_pred hhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+++-+. .+|+++| .-.|+.+....++.|++ .++|++|-.
T Consensus 458 d~a~lr---~iP~l~V~~P~d~~e~~~~l~~A~~----~~~Pv~ir~ 497 (632)
T 3l84_A 458 QLSTFR---AMPNFLTFRPADGVENVKAWQIALN----ADIPSAFVL 497 (632)
T ss_dssp HHHHHH---HSSSCEEECCSSHHHHHHHHHHHHH----CSSCEEEEC
T ss_pred HHHHHh---cCCCCEEEecCCHHHHHHHHHHHHh----CCCCEEEEE
Confidence 443322 3455443 23577787777766654 679998854
No 73
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=84.07 E-value=2 Score=44.86 Aligned_cols=108 Identities=15% Similarity=0.088 Sum_probs=67.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc-ccc--c--ccc-
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG-MSH--L--RAT- 267 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is-~~~--~--~~~- 267 (427)
.-+|.|.|.+. + -.++++..|=|+++. .-++..|-..++|+|+|+-+...... ... . .+.
T Consensus 76 ~~~A~GyAr~t----------G-~~v~~~tsGpG~~N~---~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~ 141 (570)
T 2vbf_A 76 SYMADGYARTK----------K-AAAFLTTFGVGELSA---INGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADG 141 (570)
T ss_dssp HHHHHHHHHHH----------S-CEEEEEETTHHHHHH---HHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSS
T ss_pred HHHHHHHHHHh----------C-CeEEEEcCCCCHHHH---HHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeecccc
Confidence 34566666551 3 345666667776653 66788899999999999876542211 000 0 000
Q ss_pred cCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEE
Q 014288 268 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECET 318 (427)
Q Consensus 268 ~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t 318 (427)
...+...+++.+--....+.. .++...+++|++.+..++||+.|++-.
T Consensus 142 ~~~~~~~~~~~~tk~~~~v~~---~~~~~~l~~A~~~A~~~~GPV~l~iP~ 189 (570)
T 2vbf_A 142 DFKHFMKMHEPVTAARTLLTA---ENATYEIDRVLSQLLKERKPVYINLPV 189 (570)
T ss_dssp CCCHHHHHTGGGCSEEEECCT---TTHHHHHHHHHHHHHHHCCCEEEEEEH
T ss_pred chHHHHHHhhhhEEEEEEECc---ccHHHHHHHHHHHHhhCCCCEEEEcch
Confidence 011244556666666667754 466677778888887778999999954
No 74
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=83.87 E-value=1.9 Score=44.78 Aligned_cols=108 Identities=12% Similarity=0.045 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc-c--cccc--cc-
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG-M--SHLR--AT- 267 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is-~--~~~~--~~- 267 (427)
.-+|.|.|.+. + -.++++..|=|.++. .-++..|-..++|+|+|+-+-..... . .... ..
T Consensus 56 ~~~A~Gyar~t----------g-~~v~~~tsGpG~~N~---~~gv~~A~~~~~Pll~itg~~p~~~~~~~~~~~~~~g~~ 121 (552)
T 1ovm_A 56 SYAADGYARCK----------G-FAALLTTFGVGELSA---MNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDG 121 (552)
T ss_dssp HHHHHHHHHHH----------S-CEEEEEETTHHHHHT---HHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSS
T ss_pred HHHHHHHHHhh----------C-CcEEEEccCCcHHHH---HHHHHHHhhhcCCEEEEECCCCHHHHhcccccccccCCC
Confidence 34566766662 3 236667778887654 66888999999999999876432111 0 0000 00
Q ss_pred cCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEE
Q 014288 268 SDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECET 318 (427)
Q Consensus 268 ~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t 318 (427)
...+...+++.+-.....+.. .++.+.+.+|++.+..++||+.|++-.
T Consensus 122 ~~q~~~~~~~~~tk~~~~v~~---~~~~~~i~~A~~~a~~~~GPV~l~iP~ 169 (552)
T 1ovm_A 122 EFRHFYHMSEPITVAQAVLTE---QNACYEIDRVLTTMLRERRPGYLMLPA 169 (552)
T ss_dssp CCSHHHHHTGGGCSEEEECCT---TTHHHHHHHHHHHHHHHTCCEEEEEEH
T ss_pred cHHHHHHHHHhheeEEEEEcc---ccHHHHHHHHHHHHHhCCCCEEEEeeh
Confidence 111345566666666667754 456667777777777667999999954
No 75
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=83.00 E-value=4.8 Score=41.90 Aligned_cols=94 Identities=10% Similarity=0.031 Sum_probs=58.3
Q ss_pred CceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcc-ccccccccccCchhhcccccCCCcEEEEeCCC----H
Q 014288 217 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWA-IGMSHLRATSDPQIYKKGPAFGMPGFHVDGMD----V 291 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~-is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~D----~ 291 (427)
-.+++|..|=|++|. .-++..|-.-+.|+|+|.-+-... ++.. ..| ..|...+++.+--....|...+ +
T Consensus 72 pgv~~~TsGpG~~N~---~~gia~A~~d~vPll~itG~~~~~~~g~~-~~Q--~~d~~~~~~~~tk~~~~v~~~~~~~~~ 145 (556)
T 3hww_A 72 PVAVIVTSGTAVANL---YPALIEAGLTGEKLILLTADRPPELIDCG-ANQ--AIRQPGMFASHPTHSISLPRPTQDIPA 145 (556)
T ss_dssp CEEEEECSSHHHHTT---HHHHHHHHHHCCCEEEEEEECCGGGSSSS-CTT--CCCCTTTTTTCSSEEEECCCCCTTSCH
T ss_pred CEEEEECCCcHHHhh---hHHHHHHHHhCCCeEEEeCCCCHHHhccC-CCc--cccHHHHHhhheeEEEecCCCcccccH
Confidence 345666678887775 678899999999999998654322 2211 112 2345555555544555664332 3
Q ss_pred HHHHHHHHHHHHHHHccCCCEEEEEEE
Q 014288 292 LKVREVAKEAIERARRGEGPTLVECET 318 (427)
Q Consensus 292 ~av~~a~~~A~~~ar~~~gP~lIe~~t 318 (427)
..+.+++++|+. ....||+.|++-.
T Consensus 146 ~~i~~~i~~A~~--~~r~GPV~i~iP~ 170 (556)
T 3hww_A 146 RWLVSTIDHALG--TLHAGGVHINCPF 170 (556)
T ss_dssp HHHHHHHHHHHH--SCCSSCEEEEEEC
T ss_pred HHHHHHHHHHHh--cCCCCCEEEeCCc
Confidence 456677777762 1235899999964
No 76
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=82.37 E-value=6.3 Score=42.51 Aligned_cols=102 Identities=20% Similarity=0.131 Sum_probs=58.6
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
.+.+|.|+|+. +.-++++..+.--+. ....++.+++..++||+|++...+++.+ .+++ .+..
T Consensus 439 mv~~A~GlA~~-----------gG~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~TH--q~ie 502 (690)
T 3m49_A 439 MGAAMNGIALH-----------GGLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTH--EPIE 502 (690)
T ss_dssp HHHHHHHHHHH-----------SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGG--CCSS
T ss_pred HHHHHHHHHHc-----------CCCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCcc--CCHH
Confidence 35667777775 334455543322121 0244677889999999999988775444 3332 2334
Q ss_pred hhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+++-+. .+|+++| .-.|+.+...+++.|++ ..++|++|-.
T Consensus 503 d~a~lr---~iPnl~V~~Pad~~E~~~~l~~Ai~---~~~~Pv~ir~ 543 (690)
T 3m49_A 503 QLAALR---AMPNVSVIRPADGNESVAAWRLALE---STNKPTALVL 543 (690)
T ss_dssp HHHHHH---TSTTCEEECCSSHHHHHHHHHHHHH---CSSSCEEEEC
T ss_pred HHHHHh---cCCCCEEEeeCCHHHHHHHHHHHHH---cCCCCEEEEe
Confidence 443322 3555543 33477777776666653 2368998843
No 77
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=82.08 E-value=6.6 Score=42.19 Aligned_cols=101 Identities=14% Similarity=0.088 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCch
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDPQ 271 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~d 271 (427)
+++|.|+|+. +.-++++.++..-+. -...++..++..++||++++...+++.+ .+++ .+..+
T Consensus 415 ~~~a~GlA~~-----------GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tH--q~~ed 478 (673)
T 1r9j_A 415 CAILNGLDAH-----------DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTH--QPVEL 478 (673)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSH
T ss_pred HHHHHHHHhc-----------CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCccc--CCHHH
Confidence 4467777665 334556666544332 2366788899999999999877776554 2222 22333
Q ss_pred hhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 272 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 272 ~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
++-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 479 la~lr---~iP~l~V~~Pad~~e~~~~l~~a~~---~~~~Pv~i~~ 518 (673)
T 1r9j_A 479 VAALR---AMPNLQVIRPSDQTETSGAWAVALS---SIHTPTVLCL 518 (673)
T ss_dssp HHHHH---HSTTCEEECCSSHHHHHHHHHHHHH---CTTCCEEEEC
T ss_pred HHHHc---CCCCCEEEeCCCHHHHHHHHHHHHH---hCCCeEEEEE
Confidence 33322 2454443 34577787777766653 2378999854
No 78
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=81.88 E-value=3.6 Score=44.26 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhcC-CCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 194 IPVATGAAFTSKYRREVLKEAD-CDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~-~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
+++|.|+|+. + .-++++.++...+. ...+++..++..++||++++...+++.+ .+++ | +..
T Consensus 427 v~~a~GlA~~-----------G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tH-q-~~e 490 (675)
T 1itz_A 427 GAICNGIALH-----------SPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTH-Q-PIE 490 (675)
T ss_dssp HHHHHHHHTT-----------CTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-C-CSS
T ss_pred HHHHHHHHhc-----------CCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCc-C-cHH
Confidence 4566777765 3 24566666655442 2367788899999999999987766543 2222 2 233
Q ss_pred hhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+++-+. .+|+++| .-.|+.++...++.|++ ..++|++|-.
T Consensus 491 dla~lr---~iP~l~V~~Pad~~e~~~~l~~a~~---~~~~Pv~i~~ 531 (675)
T 1itz_A 491 HLVSFR---AMPNILMLRPADGNETAGAYKVAVL---NRKRPSILAL 531 (675)
T ss_dssp HHHHHH---SSSSCEEECCCSHHHHHHHHHHHHH---CTTSCEEEEE
T ss_pred HHHHhc---cCCCeEEEECCCHHHHHHHHHHHHH---hCCCcEEEEe
Confidence 333322 3565544 34577787777766653 2378999854
No 79
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=81.47 E-value=3.3 Score=44.04 Aligned_cols=102 Identities=17% Similarity=0.177 Sum_probs=61.5
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
.+.+|.|+|++ .-++++.++++... -.+-+-++.++..++||++++.+.++ .+ .+++. ...
T Consensus 373 ~~~~a~G~A~~------------G~rp~~~~~~~F~~--~a~dqi~~~~a~~~~pvv~~~~~~g~-~g~~G~tH~--~~~ 435 (621)
T 2o1s_A 373 AVTFAAGLAIG------------GYKPIVAIYSTFLQ--RAYDQVLHDVAIQKLPVLFAIDRAGI-VGADGQTHQ--GAF 435 (621)
T ss_dssp HHHHHHHHHHT------------TCEEEEEEETTGGG--GGHHHHHHTTTTTTCCCEEEEESCBC-CCTTCGGGC--BCS
T ss_pred HHHHHHHHHHC------------CCEEEEEehHhHHH--HHHHHHHHHHHhcCCCEEEEEECCcc-CCCCCCccC--chH
Confidence 45567777775 24667777888652 22234577788999999999977664 22 12222 223
Q ss_pred hhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
|++-+..--|+.++ .-.|+.+....++.|++. .++|++|-.
T Consensus 436 d~~~~~~iP~l~v~--~P~d~~e~~~~l~~a~~~---~~~Pv~i~~ 476 (621)
T 2o1s_A 436 DLSYLRCIPEMVIM--TPSDENECRQMLYTGYHY---NDGPSAVRY 476 (621)
T ss_dssp HHHHTTTSTTCEEE--CCSSHHHHHHHHHHHHHC---CSSCEEEEC
T ss_pred HHHHHhcCCCCEEE--ecCCHHHHHHHHHHHHHc---CCCCEEEEe
Confidence 43333221244444 345788888877777642 278998855
No 80
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=79.48 E-value=6.1 Score=39.21 Aligned_cols=99 Identities=20% Similarity=0.107 Sum_probs=51.6
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEE-eCCCcccCccHHHHHHH-HHHc--------CCCeEEEEEcCCcccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNM-AALW--------KLPIVFVVENNLWAIGMS 262 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~-~GDGa~~~G~~~EaLn~-A~~~--------~LPvi~VV~NN~y~is~~ 262 (427)
.+.+|.|+|++ + -++++.+ ++|.. +.. ++.+.. ++.. ++||++++.+-+ ..+..
T Consensus 110 ~v~~a~G~A~~-----------G-~rpv~~~tf~~Fl-~~a--~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg-~~g~g 173 (369)
T 1ik6_A 110 ILGFAMGMAMA-----------G-LKPVAEIQFVDFI-WLG--ADELLNHIAKLRYRSGGNYKAPLVVRTPVGS-GTRGG 173 (369)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEECCCC-----CC--HHHHHHHHHHHHC------CCCCEEEEEECC------
T ss_pred HHHHHHHHHHC-----------C-CeeEEEecchhHH-HHH--HHHHHHHHHHHHHhhCCCCCCCEEEEEeCCC-CCCCC
Confidence 45677788776 2 3445544 88876 222 555544 4444 999999988665 22221
Q ss_pred ccccccCchhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 263 HLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 263 ~~~~~~~~d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
.. ....+. .... .+|++.| .-.|+.+....++.|++ .++|++|-.
T Consensus 174 ~~--hs~~~~-a~l~--~iPnl~V~~Psd~~e~~~ll~~A~~----~~~Pv~i~~ 219 (369)
T 1ik6_A 174 LY--HSNSPE-AIFV--HTPGLVVVMPSTPYNAKGLLKAAIR----GDDPVVFLE 219 (369)
T ss_dssp --------HH-HHHH--TCTTCEEECCCSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cc--ccccHH-HHHc--CCCCcEEEecCCHHHHHHHHHHHHh----CCCCEEEEE
Confidence 11 111122 2222 3344432 34578888887777764 678998843
No 81
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=78.30 E-value=3.3 Score=44.08 Aligned_cols=101 Identities=16% Similarity=0.138 Sum_probs=59.5
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDP 270 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~ 270 (427)
.+.+|+|+|++ .-++++.++.+.. +-.+-+-++.++..++||++++.+.++ .+ .+++.+ ..
T Consensus 376 ~~~~a~G~A~~------------G~rp~~~~~~~F~--~~a~dqi~~~~a~~~~pvv~~~~~~g~-~g~dG~tH~~--~~ 438 (629)
T 2o1x_A 376 AVTTAAGMALQ------------GMRPVVAIYSTFL--QRAYDQVLHDVAIEHLNVTFCIDRAGI-VGADGATHNG--VF 438 (629)
T ss_dssp HHHHHHHHHHT------------TCEEEEEEEHHHH--GGGHHHHHHTTTTTTCCCEEEEESBBC-CCTTCTTTCB--CS
T ss_pred HHHHHHHHHHc------------CCEEEEEecHHHH--HHHHHHHHHHHhhcCCCEEEEEECCcc-CCCCCcccCc--cH
Confidence 45567777776 2456666666643 222234567788999999999977663 22 122211 23
Q ss_pred hhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 271 QIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 271 d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
|++-+..--|+.++ .-.|+.++...++.|++ .++|++|-.
T Consensus 439 d~a~~r~iP~l~v~--~P~d~~e~~~~~~~a~~----~~~Pv~i~~ 478 (629)
T 2o1x_A 439 DLSFLRSIPGVRIG--LPKDAAELRGMLKYAQT----HDGPFAIRY 478 (629)
T ss_dssp HHHHTTTSTTCEEE--CCSSHHHHHHHHHHHHH----SSSCEEEEC
T ss_pred HHHHHHccCCcEEE--ecCCHHHHHHHHHHHHh----CCCCEEEEe
Confidence 43322221244433 34578888887777765 378998865
No 82
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=78.13 E-value=7.2 Score=42.23 Aligned_cols=99 Identities=17% Similarity=0.168 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCch
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDPQ 271 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~d 271 (427)
+++|.|+|+. +.-++++.++.+ |.+ .....+..++..++||+|+....+++.+ .+++ .+..+
T Consensus 461 v~~AaGlA~~-----------~G~~Pv~~~f~~--F~~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~TH--q~~ed 524 (711)
T 3uk1_A 461 SAAINGLVLH-----------GGYKPFGGTFLT--FSD-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTH--QSVEH 524 (711)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGG--GHH-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCSSH
T ss_pred HHHHHHHHHc-----------CCCEEEEEEhHH--HHH-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCcc--CChhH
Confidence 5667777764 234455555433 322 1256777788999999999987775543 2332 22334
Q ss_pred hhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEE
Q 014288 272 IYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 315 (427)
Q Consensus 272 ~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe 315 (427)
++-+. .+|+++| .-.|+.+....++.|++ .++|++|-
T Consensus 525 ~a~lr---~iPnl~V~~Pad~~E~~~~l~~Ai~----~~~Pv~ir 562 (711)
T 3uk1_A 525 VASLR---LIPNLDVWRPADTVETAVAWTYAVA----HQHPSCLI 562 (711)
T ss_dssp HHHHH---TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEE
T ss_pred HHHHh---cCCCCEEEecCCHHHHHHHHHHHHh----cCCCEEEE
Confidence 33322 4555544 33577787777766654 67999884
No 83
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=75.17 E-value=4.5 Score=39.70 Aligned_cols=98 Identities=19% Similarity=0.088 Sum_probs=55.9
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEE-EeCCCcccCccHHHHHHHHH---------HcCCCeEEEEEcCCccc-cc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLA-FFGDGTCNNGQFFECLNMAA---------LWKLPIVFVVENNLWAI-GM 261 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~-~~GDGa~~~G~~~EaLn~A~---------~~~LPvi~VV~NN~y~i-s~ 261 (427)
.+.+|.|+|++ + -++++. .++|.. +. .++.+...+ ..++||++++.+ ++.- ..
T Consensus 74 ~v~~a~G~A~~-----------G-~rp~~~~~f~~F~-~~--a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G 137 (341)
T 2ozl_B 74 FAGIAVGAAMA-----------G-LRPICEFMTFNFS-MQ--AIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVA 137 (341)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEECSSGGGG-GG--GHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCC
T ss_pred HHHHHHHHHHC-----------C-CEEEEEeccHHHH-HH--HHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCC
Confidence 46677788776 2 344454 388876 22 256665433 289999999985 5221 11
Q ss_pred cccccccCchhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 262 SHLRATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 262 ~~~~~~~~~d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+++.+ ..+ .... .+|++.| .-.|+.+....++.|++ .++|++|-.
T Consensus 138 ~tHs~--~~e--a~l~--~iP~l~V~~Psd~~e~~~~l~~a~~----~~~Pv~i~~ 183 (341)
T 2ozl_B 138 AQHSQ--CFA--AWYG--HCPGLKVVSPWNSEDAKGLIKSAIR----DNNPVVVLE 183 (341)
T ss_dssp GGGCC--CCH--HHHH--TSTTCEEECCCSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cchhh--HHH--HHhc--cCCCCEEEEeCCHHHHHHHHHHHHh----cCCCEEEEE
Confidence 22211 122 2222 2444432 34588888887777764 478998865
No 84
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=74.55 E-value=14 Score=39.99 Aligned_cols=101 Identities=13% Similarity=0.147 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccc--ccccccccCch
Q 014288 194 IPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIG--MSHLRATSDPQ 271 (427)
Q Consensus 194 lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is--~~~~~~~~~~d 271 (427)
+.+|.|+|+. +.-++++..+.. |.. ....++.+++..++||+||....+++.+ .+++ .+..+
T Consensus 445 v~~A~GlA~~-----------gG~~Pv~~tF~~--F~d-~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~TH--q~ied 508 (700)
T 3rim_A 445 GAILSGIVLH-----------GPTRAYGGTFLQ--FSD-YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTH--QPIEH 508 (700)
T ss_dssp HHHHHHHHHH-----------SSCEEEEEEEGG--GGG-GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--SCSSH
T ss_pred HHHHHHHHHc-----------CCCEEEEEecHH--HHH-HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCcc--CChhH
Confidence 4666777765 333444443322 111 1244688899999999999987775544 3332 23344
Q ss_pred hhcccccCCCcEEEEe-CCCHHHHHHHHHHHHHHHHccC--CCEEEEE
Q 014288 272 IYKKGPAFGMPGFHVD-GMDVLKVREVAKEAIERARRGE--GPTLVEC 316 (427)
Q Consensus 272 ~~~~a~a~G~~~~~Vd-g~D~~av~~a~~~A~~~ar~~~--gP~lIe~ 316 (427)
++-+. .+|+++|= -.|+.+...+++.|++ ..+ +|++|-.
T Consensus 509 ~a~lr---~iPnl~V~~Pad~~e~~~~l~~Ai~---~~~~~~Pv~ir~ 550 (700)
T 3rim_A 509 LSALR---AIPRLSVVRPADANETAYAWRTILA---RRNGSGPVGLIL 550 (700)
T ss_dssp HHHHH---TSTTCEEECCSSHHHHHHHHHHHHT---TTTCSSCEEEEC
T ss_pred HHHHh---cCCCCEEEeCCCHHHHHHHHHHHHH---ccCCCCCEEEEe
Confidence 43332 35555442 3477777776666653 224 6999853
No 85
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=70.63 E-value=13 Score=42.74 Aligned_cols=113 Identities=17% Similarity=0.105 Sum_probs=68.0
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchh
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQI 272 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~ 272 (427)
.+.+++|++++ +.++++.+--.+++. ..|.|..++-..+|+|+++.+.. +-++....+..-.|+
T Consensus 66 A~~aaiGAa~a-------------GaR~~t~Ts~~Gl~l--m~e~l~~~ag~~~P~Vi~va~R~-g~~~glsi~~~hsd~ 129 (1231)
T 2c42_A 66 AAGAVHGALAA-------------GALTTTFTASQGLLL--MIPNMYKISGELLPGVFHVTARA-IAAHALSIFGDHQDI 129 (1231)
T ss_dssp HHHHHHHHHHT-------------TCCEEEEECHHHHHH--HHHHHHHHHHTTCCCEEEEEECC-CCSSSBCCSCCSHHH
T ss_pred HHHHHHHHHHc-------------CChHhhhccHHHHHH--HHHHHHHHhCCCCCEEEEECCCC-ccCCCCcCCCchhhH
Confidence 45678888887 444444442222321 26777655556899888888775 222211111111122
Q ss_pred hcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCC
Q 014288 273 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHS 325 (427)
Q Consensus 273 ~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~R~~gHs 325 (427)
. .++..|++.+ ...++.+.++-+..|...+.+.+-|+++-...+|. +|.
T Consensus 130 ~-~ar~~G~~vl--~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 130 Y-AARQTGFAML--ASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp H-TTTTSSCEEE--ECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred H-HHhcCCcEEE--ECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 1 2444566444 45688899888888988888889999987776654 553
No 86
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=70.53 E-value=8.8 Score=37.31 Aligned_cols=100 Identities=12% Similarity=0.038 Sum_probs=57.1
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEE-eCCCcccCccHHHHHH-HHHH--------cCCCeEEEEEcCCcccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAAL--------WKLPIVFVVENNLWAIGMS 262 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~-~GDGa~~~G~~~EaLn-~A~~--------~~LPvi~VV~NN~y~is~~ 262 (427)
.+.+|.|+|++ + -++++++ ++++. +. .++.+. .++. +++|+++++.+.+ +...+
T Consensus 64 ~~~~a~G~A~~-----------G-~rp~~~~t~~~F~-~~--a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~ 127 (338)
T 1qs0_B 64 IVGTAVGMGAY-----------G-LRPVVEIQFADYF-YP--ASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGG 127 (338)
T ss_dssp HHHHHHHHHHH-----------T-CEEEEECSCGGGC-GG--GHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCC
T ss_pred HHHHHHHHHhC-----------C-CEEEEEeccHhHH-HH--HHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCc
Confidence 46778888887 2 3344434 88886 22 256554 3432 3599999987654 33223
Q ss_pred ccccccCchhhcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 263 HLRATSDPQIYKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 263 ~~~~~~~~d~~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
++. +..|..-+..-.|+.++. -.|+.+....++.|++ .++|++|-.
T Consensus 128 th~--s~~d~~~l~~iP~l~V~~--Psd~~e~~~~l~~A~~----~~~Pv~i~~ 173 (338)
T 1qs0_B 128 QTH--SQSPEAMFTQVCGLRTVM--PSNPYDAKGLLIASIE----CDDPVIFLE 173 (338)
T ss_dssp SSS--SCCCHHHHTTSTTCEEEC--CCSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred ccc--cccHHHHHhcCCCCEEEe--eCCHHHHHHHHHHHHh----cCCcEEEEE
Confidence 222 122332222222555443 3578888887777764 378999854
No 87
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=65.44 E-value=6.4 Score=38.52 Aligned_cols=99 Identities=14% Similarity=0.079 Sum_probs=55.6
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEE-eCCCcccCccHHHHHH-HHHHc--------CC-CeEEEEEcCCccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLN-MAALW--------KL-PIVFVVENNLWAIGM 261 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~-~GDGa~~~G~~~EaLn-~A~~~--------~L-Pvi~VV~NN~y~is~ 261 (427)
.+.+|.|+|++ + -++++.+ ++++..- .++.+. .++.+ ++ ||++++..-+ ....
T Consensus 79 ~v~~a~G~A~~-----------G-~rp~~~~tf~~F~~~---a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g-~~~G 142 (342)
T 2bfd_B 79 IVGFGIGIAVT-----------G-ATAIAEIQFADYIFP---AFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGC-VGHG 142 (342)
T ss_dssp HHHHHHHHHHT-----------T-CCEEEECSSGGGCGG---GHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESC-CSSC
T ss_pred HHHHHHHHHHC-----------C-CeeEEEecchhHHHH---HHHHHHHHHHHHHhhhcCCccCCCEEEEEecCC-CCCC
Confidence 46678888876 2 3444434 8888532 255553 34433 44 9999877543 2222
Q ss_pred cccccccCchhhcccccCCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 262 SHLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 262 ~~~~~~~~~d~~~~a~a~G~~~~-~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
+++.. ..|+.-+ + .+|++ .+.-.|+.+....++.|++ .++|++|-.
T Consensus 143 ~th~~--~~d~~~l-~--~iP~l~V~~Psd~~e~~~~l~~a~~----~~~Pv~i~~ 189 (342)
T 2bfd_B 143 ALYHS--QSPEAFF-A--HCPGIKVVIPRSPFQAKGLLLSCIE----DKNPCIFFE 189 (342)
T ss_dssp GGGSS--CCCHHHH-H--TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEEE
T ss_pred cchhh--HhHHHHH-h--cCCCcEEEeeCCHHHHHHHHHHHHh----cCCcEEEEe
Confidence 33221 2233222 2 24443 3344688888888877764 378999844
No 88
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=58.19 E-value=44 Score=32.03 Aligned_cols=98 Identities=17% Similarity=0.102 Sum_probs=55.2
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEE-eCCCcccCccHHHHHHH-HHH--------cCCCeEEEEEcCCcccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNM-AAL--------WKLPIVFVVENNLWAIGMS 262 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~-~GDGa~~~G~~~EaLn~-A~~--------~~LPvi~VV~NN~y~is~~ 262 (427)
.+.+|.|+|++ + -++++++ ++++. +. .++.+.. ++. .++|+|+++. .++.....
T Consensus 63 ~v~~a~G~A~~-----------G-~~p~~~~t~~~F~-~~--a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g 126 (324)
T 1umd_B 63 IVGAALGMAAH-----------G-LRPVAEIQFADYI-FP--GFDQLVSQVAKLRYRSGGQFTAPLVVRMP-SGGGVRGG 126 (324)
T ss_dssp HHHHHHHHHHH-----------T-CEEEEECSSGGGC-GG--GHHHHHHTTTTHHHHTTTSSCCCCEEEEE-ECSSSSCG
T ss_pred HHHHHHHHHHC-----------C-CEEEEEeccHhHH-HH--HHHHHHHHHHHHHhhcCCCCcCCEEEEEc-CCCCCCCC
Confidence 46678888877 3 3444444 88875 22 2555543 333 7999998886 34322222
Q ss_pred ccccccCchhhcccccC-CCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCEEEE
Q 014288 263 HLRATSDPQIYKKGPAF-GMPGFHVDGMDVLKVREVAKEAIERARRGEGPTLVE 315 (427)
Q Consensus 263 ~~~~~~~~d~~~~a~a~-G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe 315 (427)
...+ ..+. ...... |+.++ .-.|+.+....++.|++ .++|++|-
T Consensus 127 ~~hs--~~~~-a~~~~iP~~~V~--~P~d~~e~~~~l~~a~~----~~~Pv~i~ 171 (324)
T 1umd_B 127 HHHS--QSPE-AHFVHTAGLKVV--AVSTPYDAKGLLKAAIR----DEDPVVFL 171 (324)
T ss_dssp GGSS--CCCH-HHHHTSTTCEEE--ECCSHHHHHHHHHHHHH----CSSCEEEE
T ss_pred Cccc--hhHH-HHHhcCCCCEEE--EeCCHHHHHHHHHHHHh----cCCCEEEE
Confidence 2211 1222 222222 33333 44688888887777763 67899884
No 89
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=57.29 E-value=27 Score=33.62 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=55.0
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEE-eCCCcccCccHHHHHHH-HHH--------cCCCeEEEEEcCCcccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAF-FGDGTCNNGQFFECLNM-AAL--------WKLPIVFVVENNLWAIGMS 262 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~-~GDGa~~~G~~~EaLn~-A~~--------~~LPvi~VV~NN~y~is~~ 262 (427)
.+.+|+|+|++ + -++++++ ++++. +. .++.+.. ++. .++|+|+++. .++.....
T Consensus 62 ~v~~a~G~A~~-----------G-~rp~~~~t~~~F~-~~--a~dqi~~~~a~~~~~~~g~~~~pvv~~~~-~g~~~~~g 125 (324)
T 1w85_B 62 IGGLAIGLALQ-----------G-FRPVPEIQFFGFV-YE--VMDSICGQMARIRYRTGGRYHMPITIRSP-FGGGVHTP 125 (324)
T ss_dssp HHHHHHHHHHT-----------T-CEEEEBCSSGGGG-GG--THHHHHTTGGGHHHHTTTSSCCCCEEEEE-ECSSSCCC
T ss_pred HHHHHHHHHhC-----------C-CEEEEEecchhHH-HH--HHHHHHHHHHHHhhhccCCCcCCEEEEEe-ccCCCCCC
Confidence 46677888876 2 3344434 78876 22 2555542 333 7999998876 33222222
Q ss_pred ccccccCchhhcccccCCCcEE-EEeCCCHHHHHHHHHHHHHHHHccCCCEEEE
Q 014288 263 HLRATSDPQIYKKGPAFGMPGF-HVDGMDVLKVREVAKEAIERARRGEGPTLVE 315 (427)
Q Consensus 263 ~~~~~~~~d~~~~a~a~G~~~~-~Vdg~D~~av~~a~~~A~~~ar~~~gP~lIe 315 (427)
...+ ..+. .... .+|++ .+.-.|+.+....++.|++ .++|++|-
T Consensus 126 ~~hs--~~~~-a~~~--~iP~l~V~~Psd~~e~~~~l~~a~~----~~~Pv~i~ 170 (324)
T 1w85_B 126 ELHS--DSLE-GLVA--QQPGLKVVIPSTPYDAKGLLISAIR----DNDPVIFL 170 (324)
T ss_dssp TTSS--CCCH-HHHT--TSTTCEEECCSSHHHHHHHHHHHHH----SSSCEEEE
T ss_pred Cccc--ccHH-HHHc--cCCCCEEEeeCCHHHHHHHHHHHHH----cCCCEEEE
Confidence 1111 1222 2222 34543 3344688888887777763 67899885
No 90
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=49.83 E-value=41 Score=37.55 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=55.2
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEE--EeCCCcccCc--cHHHHH-HHH-HHc--CCCeEEEEEcCCcccccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLA--FFGDGTCNNG--QFFECL-NMA-ALW--KLPIVFVVENNLWAIGMSHL 264 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~--~~GDGa~~~G--~~~EaL-n~A-~~~--~LPvi~VV~NN~y~is~~~~ 264 (427)
.+++|.|+|++ ++...+|+ .+|| |.+| ..+.-+ +-+ +.| ++||++++.. +|.-..+.+
T Consensus 664 ~vg~a~G~A~~-----------G~~~lpv~e~qf~d--F~~~AQra~DQii~~~~ak~~~~~~vv~~l~~-G~~g~G~~H 729 (933)
T 2jgd_A 664 VLAFEYGYATA-----------EPRTLTIWEAQFGD--FANGAQVVIDQFISSGEQKWGRMCGLVMLLPH-GYEGQGPEH 729 (933)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEEC-CGG--GGGGGHHHHHHTTTTHHHHHCCCCCCEEEEEC-CCSSSCTTS
T ss_pred HHHHHHHHHhc-----------CCCCCCEEEEEEhh--hhcccHHHHHHHHHHHHHHHccCCCEEEEEeC-CCCCCCccc
Confidence 46678888877 55544443 5665 4333 223333 333 344 8899998886 543223322
Q ss_pred ccccCchhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEE
Q 014288 265 RATSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 315 (427)
Q Consensus 265 ~~~~~~d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe 315 (427)
.+....++.. -..+|+++| .-.|+.+....++.++. +..++|++|-
T Consensus 730 ss~~~E~~l~---~~~~pnm~V~~Pst~~e~~~lLr~a~~--~~~~~Pvii~ 776 (933)
T 2jgd_A 730 SSARLERYLQ---LCAEQNMQVCVPSTPAQVYHMLRRQAL--RGMRRPLVVM 776 (933)
T ss_dssp SCCCHHHHHH---TCCTTCCEEECCCSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred ccchHHHHHH---HhCCCCeEEEecCCHHHHHHHHHHHHH--hcCCCcEEEE
Confidence 2222233333 334455543 34578888776665531 2347999883
No 91
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=49.05 E-value=24 Score=32.25 Aligned_cols=56 Identities=20% Similarity=0.133 Sum_probs=37.8
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHcCCC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeC
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALWKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 288 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 288 (427)
+.+++|.+.|.|+. .++|--+...+++ |+.||.|+.-+ .-.++|+.+|+|++.++-
T Consensus 5 ~~riavl~SG~Gsn-----l~all~~~~~~~~~eI~~Vis~~~~a------------~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 5 PLPIVVLISGNGTN-----LQAIIGAIQKGLAIEIRAVISNRADA------------YGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp CEEEEEEESSCCHH-----HHHHHHHHHTTCSEEEEEEEESCTTC------------HHHHHHHHTTCCEEECCG
T ss_pred CcEEEEEEeCCcHH-----HHHHHHHHHcCCCCEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCc
Confidence 34677778888776 5566666665555 78888775311 113678889999998864
No 92
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=46.89 E-value=38 Score=32.32 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=37.2
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHc-CCC--eEEEEEcC-CccccccccccccCchhhcccccCCCcEEEEeC
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENN-LWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 288 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~-~LP--vi~VV~NN-~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 288 (427)
+.+++|.+.|-|+. .++|--+... .+| |+.||.|+ . +...+|+.+|+|++.++-
T Consensus 89 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~i~~Visn~p~--------------~~~~~A~~~gIp~~~~~~ 146 (288)
T 3obi_A 89 RRKVMLLVSQSDHC-----LADILYRWRVGDLHMIPTAIVSNHPR--------------ETFSGFDFGDIPFYHFPV 146 (288)
T ss_dssp CEEEEEEECSCCHH-----HHHHHHHHHTTSSCEEEEEEEESSCG--------------GGSCCTTTTTCCEEECCC
T ss_pred CcEEEEEEcCCCCC-----HHHHHHHHHCCCCCeEEEEEEcCCCh--------------hHHHHHHHcCCCEEEeCC
Confidence 44677777888764 5667666654 366 78888777 3 233568889999998753
No 93
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=45.13 E-value=42 Score=31.99 Aligned_cols=55 Identities=13% Similarity=0.041 Sum_probs=37.5
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHc-CCC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeC
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 288 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~-~LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 288 (427)
+.+++|...|-|+. .++|--+... .+| |+.||.|+.-+ ...+|+.+|+|++.++-
T Consensus 88 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~i~~Visn~~~a-------------~~~~A~~~gIp~~~~~~ 145 (287)
T 3nrb_A 88 RKKVVIMVSKFDHC-----LGDLLYRHRLGELDMEVVGIISNHPRE-------------ALSVSLVGDIPFHYLPV 145 (287)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHHTSSCCEEEEEEESSCGG-------------GCCCCCCTTSCEEECCC
T ss_pred CcEEEEEEeCCCcC-----HHHHHHHHHCCCCCeEEEEEEeCChHH-------------HHHHHHHcCCCEEEEec
Confidence 45677888888754 5566666543 355 78888887510 44578889999998863
No 94
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=43.95 E-value=87 Score=25.99 Aligned_cols=38 Identities=26% Similarity=0.353 Sum_probs=32.3
Q ss_pred ccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCE
Q 014288 275 KGPAFGMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 312 (427)
Q Consensus 275 ~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~ 312 (427)
++.+.|.-.++..|+|.+++..++++-++++|++.|.+
T Consensus 78 mgsgsgvm~i~f~gddlea~ekalkemirqarkfagtv 115 (170)
T 4hhu_A 78 MGSGSGVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 115 (170)
T ss_dssp ECTTCCEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred EeCCceEEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 45566777788899999999999999999999987753
No 95
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=43.80 E-value=1e+02 Score=26.72 Aligned_cols=72 Identities=11% Similarity=-0.055 Sum_probs=44.1
Q ss_pred CceEEEEeCCCcccCccHHHHHHHHHHcCCCeEEEEEcCCcccccccc----------c-----cccCchhhcccccCCC
Q 014288 217 DHVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHL----------R-----ATSDPQIYKKGPAFGM 281 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~----------~-----~~~~~d~~~~a~a~G~ 281 (427)
...+|+++.||..+.+...+.+..+...+++|..|-.-+.-+...+.. . ......+..+|..-|.
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG 190 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKG 190 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCC
Confidence 457899999999887777888888888887766664433101000000 0 0011235667777788
Q ss_pred cEEEEeC
Q 014288 282 PGFHVDG 288 (427)
Q Consensus 282 ~~~~Vdg 288 (427)
.++.++.
T Consensus 191 ~~~~~~~ 197 (218)
T 3ibs_A 191 IYVRVDN 197 (218)
T ss_dssp EEEEECS
T ss_pred EEEECCC
Confidence 8888865
No 96
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=43.69 E-value=61 Score=35.85 Aligned_cols=106 Identities=10% Similarity=0.054 Sum_probs=56.0
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCcc---HHHHHHHHH-Hc--CCCeEEEEEcCCcccccccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMAA-LW--KLPIVFVVENNLWAIGMSHLRA 266 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~---~~EaLn~A~-~~--~LPvi~VV~NN~y~is~~~~~~ 266 (427)
.+++|+|+|++ ++..+++.-+-=|.|..+. +-+=++-+. .| ++||++++-.-+++ ..+.+.+
T Consensus 596 ~vG~a~G~A~~-----------G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G-~Gp~Hs~ 663 (868)
T 2yic_A 596 AVGFEYGYSVG-----------NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTS 663 (868)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSC
T ss_pred HHHHHHHHHcc-----------CCCCceEEEEehHHHHhhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCC-CChhhcC
Confidence 46778888887 6665554444444455443 222222221 23 78999888854433 2232222
Q ss_pred ccCchhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEE
Q 014288 267 TSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVE 315 (427)
Q Consensus 267 ~~~~d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe 315 (427)
....++... ..+|+++| .-.|+.+....++.++. +..++|++|-
T Consensus 664 ~~~E~~l~l---~~~pnm~V~~Ps~p~~~~~lLr~a~~--~~~~~Pvii~ 708 (868)
T 2yic_A 664 GRIERFLQL---WAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVF 708 (868)
T ss_dssp CCHHHHHHH---CCTTSCEEECCCSHHHHHHHHHHHHH--SSCCCCEEEE
T ss_pred CcHHHHHhc---CCCCCCEEEEeCCHHHHHHHHHHHHh--cCCCCcEEEE
Confidence 212344333 33455543 33578888777766553 2245898763
No 97
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=42.41 E-value=32 Score=31.36 Aligned_cols=54 Identities=17% Similarity=0.278 Sum_probs=36.7
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcC-CC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeC
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWK-LP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 288 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~-LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 288 (427)
+++|.+.|-|+. .++|--+...+ +| |+.||.|+. .....++|+.+|+|++.++-
T Consensus 4 riavl~Sg~Gsn-----l~ali~~~~~~~l~~eI~~Visn~~------------~a~v~~~A~~~gIp~~~~~~ 60 (211)
T 3p9x_A 4 RVAIFASGSGTN-----AEAIIQSQKAGQLPCEVALLITDKP------------GAKVVERVKVHEIPVCALDP 60 (211)
T ss_dssp EEEEECCTTCHH-----HHHHHHHHHTTCCSSEEEEEEESCS------------SSHHHHHHHTTTCCEEECCG
T ss_pred EEEEEEeCCchH-----HHHHHHHHHcCCCCcEEEEEEECCC------------CcHHHHHHHHcCCCEEEeCh
Confidence 466777777644 66777666443 55 788888764 12355788899999988753
No 98
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=41.51 E-value=71 Score=30.64 Aligned_cols=53 Identities=21% Similarity=0.207 Sum_probs=37.2
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHcC-CC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEe
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALWK-LP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 287 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~~-LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vd 287 (427)
+.+++|...|.|+. .++|--+...+ +| |+.||.|+. +...+|+.+|+|++.++
T Consensus 105 ~~ri~vl~Sg~g~n-----l~~ll~~~~~g~l~~~I~~Visn~~--------------~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 105 KKRVVLMASRESHC-----LADLLHRWHSDELDCDIACVISNHQ--------------DLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHTTCSCSEEEEEEESSS--------------TTHHHHHTTTCCEEECC
T ss_pred CcEEEEEEeCCchh-----HHHHHHHHHCCCCCcEEEEEEECcH--------------HHHHHHHHcCCCEEEcC
Confidence 45678888888764 66776665543 55 788887774 13356888999999884
No 99
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=41.06 E-value=79 Score=28.62 Aligned_cols=55 Identities=27% Similarity=0.248 Sum_probs=37.2
Q ss_pred CceEEEEeCCCcccCccHHHHHHHHHHc-CCC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeC
Q 014288 217 DHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 288 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~~~EaLn~A~~~-~LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 288 (427)
.+++|.+.|.|+. .+++--+... +++ |+.||.|+.-+ .-.++|+.+|+|++.++-
T Consensus 8 ~ri~vl~SG~gsn-----l~all~~~~~~~l~~~I~~Visn~~~a------------~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 8 NRVVIFISGGGSN-----MEALIRAAQAPGFPAEIVAVFSDKAEA------------GGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp EEEEEEESSCCHH-----HHHHHHHHTSTTCSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCG
T ss_pred ccEEEEEECCcHH-----HHHHHHHHHcCCCCcEEEEEEECCccc------------HHHHHHHHcCCCEEEeCc
Confidence 4688889999876 4455555544 355 78888776311 113678899999998864
No 100
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=40.27 E-value=41 Score=32.07 Aligned_cols=53 Identities=19% Similarity=0.214 Sum_probs=36.9
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHc-CCC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEe
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 287 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~-~LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vd 287 (427)
+.+++|...|.|+. .++|--+... .+| |+.||.|+. +...+|+.+|+|++.++
T Consensus 90 ~~ri~vl~Sg~g~~-----l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 90 RPKVVIMVSKADHC-----LNDLLYRQRIGQLGMDVVAVVSNHP--------------DLEPLAHWHKIPYYHFA 145 (286)
T ss_dssp CCEEEEEESSCCHH-----HHHHHHHHHTTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CcEEEEEEeCCCCC-----HHHHHHHHHCCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 45678888888754 6677766554 355 788888775 12345788999999875
No 101
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=39.75 E-value=39 Score=29.47 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 014288 347 ITALKKYLIESSLASEAELKAIEKKIDEVVED 378 (427)
Q Consensus 347 i~~~~~~L~~~g~~t~ee~~~i~~e~~~~v~~ 378 (427)
+..+.+.|+++|++|++|+++-.+++.+....
T Consensus 113 L~ALe~lLvekGvit~~EL~ar~aEv~ar~~~ 144 (157)
T 2zzd_B 113 LLTAARILVDKQFVTLTELHNKIVEMRERVAS 144 (157)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhhhc
Confidence 67889999999999999999888888877543
No 102
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=38.93 E-value=50 Score=30.07 Aligned_cols=57 Identities=26% Similarity=0.262 Sum_probs=37.1
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHc-CCC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCC
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 289 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~-~LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~ 289 (427)
+.+++|.+.|.|+. .+++--+... +++ |+.||.|+.-+ .-.++|+.+|+|++.++-.
T Consensus 8 ~~ri~vl~SG~gsn-----l~all~~~~~~~~~~~I~~Vis~~~~a------------~~l~~A~~~gIp~~~~~~~ 67 (215)
T 3kcq_A 8 ELRVGVLISGRGSN-----LEALAKAFSTEESSVVISCVISNNAEA------------RGLLIAQSYGIPTFVVKRK 67 (215)
T ss_dssp CEEEEEEESSCCHH-----HHHHHHHTCCC-CSEEEEEEEESCTTC------------THHHHHHHTTCCEEECCBT
T ss_pred CCEEEEEEECCcHH-----HHHHHHHHHcCCCCcEEEEEEeCCcch------------HHHHHHHHcCCCEEEeCcc
Confidence 45688889999876 4455555433 344 78888776311 1136788899999988643
No 103
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=37.90 E-value=41 Score=32.19 Aligned_cols=53 Identities=21% Similarity=0.167 Sum_probs=36.4
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHHHc-CCC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEe
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAALW-KLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVD 287 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~~~-~LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vd 287 (427)
+.+++|...|.|+. .++|--+... .+| |..||.|+. +...+|+.+|+|++.++
T Consensus 95 ~~ri~vl~Sg~g~~-----l~~ll~~~~~g~l~~~i~~Visn~~--------------~~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 95 RPKVLIMVSKLEHC-----LADLLFRWKMGELKMDIVGIVSNHP--------------DFAPLAAQHGLPFRHFP 150 (292)
T ss_dssp CCEEEEEECSCCHH-----HHHHHHHHHHTSSCCEEEEEEESSS--------------TTHHHHHHTTCCEEECC
T ss_pred CCEEEEEEcCCCcC-----HHHHHHHHHcCCCCcEEEEEEeCcH--------------HHHHHHHHcCCCEEEeC
Confidence 45678888888754 5566666543 355 788888775 12345888999999875
No 104
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=36.29 E-value=83 Score=35.76 Aligned_cols=107 Identities=10% Similarity=0.052 Sum_probs=57.4
Q ss_pred chHHHHHHHHHHHHHhhhhhhcCCCceEEEEeCCCcccCcc---HHHHHHHHH-Hc--CCCeEEEEEcCCcccccccccc
Q 014288 193 GIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ---FFECLNMAA-LW--KLPIVFVVENNLWAIGMSHLRA 266 (427)
Q Consensus 193 ~lp~AvGaA~A~k~~~~~~~~~~~~~~vv~~~GDGa~~~G~---~~EaLn~A~-~~--~LPvi~VV~NN~y~is~~~~~~ 266 (427)
.++.|+|+|++ +++.+++.-+-=|.|.++. +-+=++-+. .| ++||++.+-.-+.+ ..+.+.+
T Consensus 841 ~vg~a~G~A~~-----------G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~k~~~~~~vv~~lp~G~~G-~G~~Hs~ 908 (1113)
T 2xt6_A 841 AVGFEYGYSVG-----------NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEG-QGPDHTS 908 (1113)
T ss_dssp HHHHHHHHHHH-----------CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSS-SCTTSSC
T ss_pred HHHHHHHHHhc-----------CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCCC-CChhhhc
Confidence 56778888887 6666555444344455443 222222221 23 78999988854433 2232222
Q ss_pred ccCchhhcccccCCCcEEEE-eCCCHHHHHHHHHHHHHHHHccCCCEEEEE
Q 014288 267 TSDPQIYKKGPAFGMPGFHV-DGMDVLKVREVAKEAIERARRGEGPTLVEC 316 (427)
Q Consensus 267 ~~~~d~~~~a~a~G~~~~~V-dg~D~~av~~a~~~A~~~ar~~~gP~lIe~ 316 (427)
....++... ..+|+++| .-.|+.+....++.++. +..++|++|--
T Consensus 909 ~~~E~~l~l---~~~pnm~V~~Ps~~~~~~~lLr~a~~--~~~~~Pvii~~ 954 (1113)
T 2xt6_A 909 GRIERFLQL---WAEGSMTIAMPSTPANYFHLLRRHGK--DGIQRPLIVFT 954 (1113)
T ss_dssp CCHHHHHHH---CCTTSCEEECCSSHHHHHHHHHHHHH--SSCCCCEEEEE
T ss_pred ccHHHHHhc---CCCCCcEEEecCCHHHHHHHHHHHHh--ccCCCCEEEEe
Confidence 222334332 34455543 33578888887776653 23468988743
No 105
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=33.59 E-value=77 Score=28.59 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=47.2
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcC---CCeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCC---CH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWK---LPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM---DV 291 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~---LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~---D~ 291 (427)
+++|.+.|.|+. .++|--+...+ ..|+.||.|+.- ....++|+.+|+|++.++-. +-
T Consensus 2 riaVl~SG~Gs~-----L~aLi~~~~~~~~~~~I~~Vvs~~~~------------~~~~~~A~~~gIp~~~~~~~~~~~r 64 (209)
T 1meo_A 2 RVAVLISGTGSN-----LQALIDSTREPNSSAQIDIVISNKAA------------VAGLDKAERAGIPTRVINHKLYKNR 64 (209)
T ss_dssp EEEEEESSSCTT-----HHHHHHHHHSTTCSCEEEEEEESSTT------------CHHHHHHHHTTCCEEECCGGGSSSH
T ss_pred eEEEEEECCchH-----HHHHHHHHhcCCCCcEEEEEEeCCCC------------hHHHHHHHHcCCCEEEECccccCch
Confidence 478888899875 55665554433 447888877641 11246788899999987642 22
Q ss_pred HHHHHHHHHHHHHHHccCCCEEEEEEEe
Q 014288 292 LKVREVAKEAIERARRGEGPTLVECETY 319 (427)
Q Consensus 292 ~av~~a~~~A~~~ar~~~gP~lIe~~t~ 319 (427)
.+..+.+.+. . +.-.|-+|-+..|
T Consensus 65 ~~~~~~~~~~---l-~~~~~Dliv~a~y 88 (209)
T 1meo_A 65 VEFDSAIDLV---L-EEFSIDIVCLAGF 88 (209)
T ss_dssp HHHHHHHHHH---H-HHTTCCEEEEESC
T ss_pred hhhhHHHHHH---H-HhcCCCEEEEcch
Confidence 2222222222 2 2345667766655
No 106
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=32.65 E-value=54 Score=27.23 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=28.6
Q ss_pred CCcEEEEeCCCHHHHHHHHHHHHHHHHccCCCE
Q 014288 280 GMPGFHVDGMDVLKVREVAKEAIERARRGEGPT 312 (427)
Q Consensus 280 G~~~~~Vdg~D~~av~~a~~~A~~~ar~~~gP~ 312 (427)
|.-.++..|+|.+++..++++-++++|++.|.+
T Consensus 2 gvm~i~f~gddlea~ekalkemirqarkfagtv 34 (170)
T 4hhu_A 2 GVMVIVFEGDDLEALEKALKEMIRQARKFAGTV 34 (170)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred ceEEEEEecCcHHHHHHHHHHHHHHHHhhcceE
Confidence 555678899999999999999999999987754
No 107
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=32.54 E-value=62 Score=29.45 Aligned_cols=80 Identities=21% Similarity=0.193 Sum_probs=45.3
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCCC--eEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCC---CHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKLP--IVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM---DVL 292 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~LP--vi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~---D~~ 292 (427)
+++|.+.|-|+. .++|--+...+++ |+.|+.|+. + ...++|+.+|+|++.++-. +-.
T Consensus 14 ri~vl~SG~gsn-----l~all~~~~~~~~~eI~~Vis~~~-a------------~~~~~A~~~gIp~~~~~~~~~~~r~ 75 (215)
T 3da8_A 14 RLVVLASGTGSL-----LRSLLDAAVGDYPARVVAVGVDRE-C------------RAAEIAAEASVPVFTVRLADHPSRD 75 (215)
T ss_dssp EEEEEESSCCHH-----HHHHHHHSSTTCSEEEEEEEESSC-C------------HHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEeCChHH-----HHHHHHHHhccCCCeEEEEEeCCc-h------------HHHHHHHHcCCCEEEeCcccccchh
Confidence 566666788765 4455544433454 777777664 1 1246788899999998522 222
Q ss_pred HHHHHHHHHHHHHHccCCCEEEEEEEe
Q 014288 293 KVREVAKEAIERARRGEGPTLVECETY 319 (427)
Q Consensus 293 av~~a~~~A~~~ar~~~gP~lIe~~t~ 319 (427)
+..+ ++....+..+|=+|-+..|
T Consensus 76 ~~d~----~~~~~l~~~~~Dlivlagy 98 (215)
T 3da8_A 76 AWDV----AITAATAAHEPDLVVSAGF 98 (215)
T ss_dssp HHHH----HHHHHHHTTCCSEEEEEEC
T ss_pred hhhH----HHHHHHHhhCCCEEEEcCc
Confidence 2222 2222223445666666655
No 108
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=32.13 E-value=1.2e+02 Score=28.56 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=28.5
Q ss_pred EEEeCCCc--ccCccHHHHHHHHHHcCCCeEEEEEcC
Q 014288 221 LAFFGDGT--CNNGQFFECLNMAALWKLPIVFVVENN 255 (427)
Q Consensus 221 v~~~GDGa--~~~G~~~EaLn~A~~~~LPvi~VV~NN 255 (427)
|+|--||+ ..+|.+.-+|.+|..+. .|.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 56777888 46899999999999999 999998653
No 109
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=31.89 E-value=93 Score=26.51 Aligned_cols=81 Identities=11% Similarity=0.073 Sum_probs=43.2
Q ss_pred CceEEEEeCCCcccCcc--HHHHHHHHHHcCCCeEEEEEcCCccccccccccccCchhhcccccCCCc-EEEEeCCCHHH
Q 014288 217 DHVTLAFFGDGTCNNGQ--FFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMP-GFHVDGMDVLK 293 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~--~~EaLn~A~~~~LPvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~-~~~Vdg~D~~a 293 (427)
...+++++.||..+.+. ..+.+..+...+++|..|-.-+. .........+..+|..-|.. ++.++. ..+
T Consensus 110 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~igvG~~------~~~~~~~~~L~~iA~~~~g~~~~~~~~--~~~ 181 (198)
T 1n3y_A 110 AAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLA------FQNRNSWKELNDIASKPSQEHIFKVED--FDA 181 (198)
T ss_dssp SEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEEEESGG------GGSSTTHHHHHHHSCSSSGGGEEEESS--GGG
T ss_pred CceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEEEcccc------ccccccHHHHHHHHcCCCcccEEEeCC--HHH
Confidence 35688999999876432 36677777788887665533222 10000112355566554443 466653 334
Q ss_pred HHHHHHHHHHHH
Q 014288 294 VREVAKEAIERA 305 (427)
Q Consensus 294 v~~a~~~A~~~a 305 (427)
+.+.+.+..++.
T Consensus 182 l~~~~~~i~~~i 193 (198)
T 1n3y_A 182 LKDIQNQLKEKI 193 (198)
T ss_dssp GGGGHHHHHHHH
T ss_pred HHHHHHHHHhhe
Confidence 444444444433
No 110
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=31.84 E-value=46 Score=29.44 Aligned_cols=33 Identities=3% Similarity=-0.093 Sum_probs=21.7
Q ss_pred eEEEEeCCCcccCccHHHHHHHHHHcCCCeEEE
Q 014288 219 VTLAFFGDGTCNNGQFFECLNMAALWKLPIVFV 251 (427)
Q Consensus 219 ~vv~~~GDGa~~~G~~~EaLn~A~~~~LPvi~V 251 (427)
+++.+.||+....+...+....+...+..|.+|
T Consensus 109 iiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 109 IVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 355556666444555667777778888876665
No 111
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=31.52 E-value=58 Score=24.11 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=25.2
Q ss_pred EEEeCCCHHHHHHHHHHHHHHHHccCCCE
Q 014288 284 FHVDGMDVLKVREVAKEAIERARRGEGPT 312 (427)
Q Consensus 284 ~~Vdg~D~~av~~a~~~A~~~ar~~~gP~ 312 (427)
++..|.|.++...++++.++++|+..|.+
T Consensus 5 irfrgddleafekalkemirqarkfagtv 33 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGTV 33 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCEE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcceE
Confidence 46678999999999999999999987753
No 112
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=30.36 E-value=36 Score=30.84 Aligned_cols=82 Identities=12% Similarity=0.174 Sum_probs=45.2
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCC--CeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCC---CHH
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM---DVL 292 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~L--Pvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~---D~~ 292 (427)
+++|.+.|.|++.+. .|......++ .|+.||.|+. .....++|+.+|+|++.++-. +..
T Consensus 5 ki~vl~sG~g~~~~~----~l~~l~~~~l~~~I~~Vit~~~------------~~~v~~~A~~~gIp~~~~~~~~~~~~~ 68 (212)
T 3av3_A 5 RLAVFASGSGTNFQA----IVDAAKRGDLPARVALLVCDRP------------GAKVIERAARENVPAFVFSPKDYPSKA 68 (212)
T ss_dssp EEEEECCSSCHHHHH----HHHHHHTTCCCEEEEEEEESST------------TCHHHHHHHHTTCCEEECCGGGSSSHH
T ss_pred EEEEEEECCcHHHHH----HHHHHHhCCCCCeEEEEEeCCC------------CcHHHHHHHHcCCCEEEeCcccccchh
Confidence 578888898876332 2222223333 4777777753 123557788999999987643 222
Q ss_pred HHHHHHHHHHHHHHccCCCEEEEEEEe
Q 014288 293 KVREVAKEAIERARRGEGPTLVECETY 319 (427)
Q Consensus 293 av~~a~~~A~~~ar~~~gP~lIe~~t~ 319 (427)
+..+.+.+. .+ ..+|=+|-+..|
T Consensus 69 ~~~~~~~~~---l~-~~~~Dliv~a~y 91 (212)
T 3av3_A 69 AFESEILRE---LK-GRQIDWIALAGY 91 (212)
T ss_dssp HHHHHHHHH---HH-HTTCCEEEESSC
T ss_pred hhHHHHHHH---HH-hcCCCEEEEchh
Confidence 222222222 22 335666666554
No 113
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=27.72 E-value=48 Score=29.75 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=31.8
Q ss_pred CCceEEEEeCCCcccCccHHHHHHHHH-HcCCCeEEEEEc
Q 014288 216 CDHVTLAFFGDGTCNNGQFFECLNMAA-LWKLPIVFVVEN 254 (427)
Q Consensus 216 ~~~~vv~~~GDGa~~~G~~~EaLn~A~-~~~LPvi~VV~N 254 (427)
....+|+++|+=.....-+..++..|. ..++|||.|..+
T Consensus 79 ~Sk~vIllIs~~T~~s~~v~wEIe~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 79 NSKNIILFLSSITANSRALREEMNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp TEEEEEEECCTTCCCCHHHHHHHHHHTTTTCCCEEEEETT
T ss_pred hcCcEEEEEecCccccchhHHHHHHHHHhcCCcEEEEECC
Confidence 456899999999965434555999999 999999999776
No 114
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=24.34 E-value=84 Score=28.36 Aligned_cols=54 Identities=13% Similarity=0.197 Sum_probs=35.5
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcC-C--CeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeC
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWK-L--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDG 288 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~-L--Pvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg 288 (427)
+++|.+.|.|+. .++|--+...+ + .|+.||.|+. .....++|+.+|+|++.++-
T Consensus 2 ri~vl~Sg~gsn-----l~ali~~~~~~~~~~~i~~Vis~~~------------~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 2 NIVVLISGNGSN-----LQAIIDACKTNKIKGTVRAVFSNKA------------DAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp EEEEEESSCCHH-----HHHHHHHHHTTSSSSEEEEEEESCT------------TCHHHHHHHHTTCEEEECCG
T ss_pred EEEEEEECCcHH-----HHHHHHHHHcCCCCceEEEEEeCCC------------chHHHHHHHHcCCcEEEeCc
Confidence 467888888864 45555554433 3 3777887753 11235678889999998763
No 115
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=23.34 E-value=1e+02 Score=30.68 Aligned_cols=50 Identities=26% Similarity=0.198 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHhcCeecccccCCCChHHHHHHHHHhcCCCCEEEcCCcchH
Q 014288 91 LGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKEDSVVSTYRDHV 143 (427)
Q Consensus 91 ~~R~~e~~~~~~~~~gk~~G~~~~~~GqEa~~vg~~~~L~~~D~v~~~yR~~~ 143 (427)
..+.||+++.+++.... -+..+.|.+|+..++..+++++|.|+..--.|+
T Consensus 83 ~~~~le~~lA~l~g~~~---~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~ 132 (430)
T 3ri6_A 83 TVEDLEQRLKNLTGALG---VLALGSGMAAISTAILTLARAGDSVVTTDRLFG 132 (430)
T ss_dssp HHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCH
T ss_pred HHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCch
Confidence 45678888877664322 233468999999888888999998776434443
No 116
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=22.28 E-value=1.4e+02 Score=24.49 Aligned_cols=46 Identities=17% Similarity=0.336 Sum_probs=37.8
Q ss_pred hcccccCCCcEEEEeCCCHHHHHHHHHHHHHHHHc--cCCCEEEEEEE
Q 014288 273 YKKGPAFGMPGFHVDGMDVLKVREVAKEAIERARR--GEGPTLVECET 318 (427)
Q Consensus 273 ~~~a~a~G~~~~~Vdg~D~~av~~a~~~A~~~ar~--~~gP~lIe~~t 318 (427)
.-++..+++-++.+...|+.++.+.+.+-++++-. .+.|++|++..
T Consensus 9 elKG~~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~ 56 (120)
T 3ghf_A 9 ELKGSSFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSG 56 (120)
T ss_dssp CCCCCCCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEE
T ss_pred EEEcCeeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccc
Confidence 34566789999999999999999999998888765 35799999854
No 117
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=22.09 E-value=84 Score=32.54 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=21.2
Q ss_pred CceEEEEeCCCcccCcc--------HHHHHHHHHHcCCCeEEEEEcCC
Q 014288 217 DHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNL 256 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~--------~~EaLn~A~~~~LPvi~VV~NN~ 256 (427)
++.|+++.-|..+..|. +..++.+|...++|+|+++++-+
T Consensus 90 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~~P~I~l~~SGG 137 (522)
T 1x0u_A 90 GRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGG 137 (522)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred CEEEEEEEecCceeCccccHHHHHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 34455555555554443 34455556666666655555443
No 118
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=21.95 E-value=1.2e+02 Score=27.29 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=30.2
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-----HHHHHhhhC
Q 014288 347 ITALKKYLIESSLASEAELKAIEKKIDEVVE-----DAVEFADES 386 (427)
Q Consensus 347 i~~~~~~L~~~g~~t~ee~~~i~~e~~~~v~-----~a~~~A~~~ 386 (427)
...++..|+++|+++.++++.+.+.++..+- +-++.|+..
T Consensus 20 ~~AL~~lL~eKGli~~~~id~~~~~~e~~~gP~nGA~vVArAW~D 64 (203)
T 1ugp_A 20 VKALESMLIEQGILTTSMIDRMAEIYENEVGPHLGAKVVVKAWTD 64 (203)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHhcccCCcccCeeeehhhCC
Confidence 4578999999999999999998887776622 334556653
No 119
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=20.76 E-value=97 Score=32.11 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=28.3
Q ss_pred CceEEEEeCCCcccCcc--------HHHHHHHHHHcCCCeEEEEEcCC
Q 014288 217 DHVTLAFFGDGTCNNGQ--------FFECLNMAALWKLPIVFVVENNL 256 (427)
Q Consensus 217 ~~~vv~~~GDGa~~~G~--------~~EaLn~A~~~~LPvi~VV~NN~ 256 (427)
++.|+++.-|..+..|. +..++.+|...++|+|+++++-+
T Consensus 94 Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~~lP~I~l~~SGG 141 (523)
T 1on3_A 94 GRPVHAASQDFTVMGGSAGETQSTKVVETMEQALLTGTPFLFFYDSGG 141 (523)
T ss_dssp TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEECS
T ss_pred CEEEEEEEEcCCccCCcCcHHHHHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 55677777777766554 45667777888888888877655
No 120
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.70 E-value=58 Score=29.46 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=33.5
Q ss_pred ceEEEEeCCCcccCccHHHHHHHHHHcCC--CeEEEEEcCCccccccccccccCchhhcccccCCCcEEEEeCC
Q 014288 218 HVTLAFFGDGTCNNGQFFECLNMAALWKL--PIVFVVENNLWAIGMSHLRATSDPQIYKKGPAFGMPGFHVDGM 289 (427)
Q Consensus 218 ~~vv~~~GDGa~~~G~~~EaLn~A~~~~L--Pvi~VV~NN~y~is~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~ 289 (427)
+++|.+.|.|++.+- .|......++ .|+.||.|+. .....++|+.+|+|++.++-.
T Consensus 3 rI~vl~SG~g~~~~~----~l~~l~~~~~~~~i~~Vvs~~~------------~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 3 KIGVLVSGRGSNLQA----IIDAIESGKVNASIELVISDNP------------KAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp EEEEEECSCCHHHHH----HHHHHHTTSSCEEEEEEEESCT------------TCHHHHHHHHHTCCEEECCGG
T ss_pred EEEEEEeCCcHHHHH----HHHHHHhCCCCCeEEEEEeCCC------------ChHHHHHHHHcCCCEEEeCcc
Confidence 356666788875332 2222223345 4777777753 112456788899999987643
Done!