Your job contains 1 sequence.
>014291
MGAACCVAARDKTITSSTSADILHRNIRYSPTWSFRWDHRGRVAGEETAVAWFPDGISRN
DRSDIKYESAYASEEGSPLDSFPRHTWQKSPVSEGTAAGNVRTPTSDHSLSRNISMDVNL
EQVKESTDSQEVSHPSPAKLSLSLPSTSSLTSSPLSSQSHLYPASSTTAKWPRHSPGHPL
LRQASDSRIPGLKSVNGYSVREERPVIPSWSNESTVGSGVGSSDGWSMNAFSELMATSHK
ERWSFDSESLGFNHEKIARSCSRVSASSSVDMQTCGVCSKLLSELCVVAVLTCGHLYHAD
CLENITAEINKYDPACPVCTLGEKKTHKLSERALKSEMESKARNNKRWKNRIVDSNLDSN
SVVLDRHKGSWNEGKGPKMASSSSLKSSSGKPFLKRHFSFGSKGSRSLSENHSTWKKGFF
WPKSSRT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014291
(427 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2136368 - symbol:AT4G39140 species:3702 "Arabi... 782 1.0e-77 1
TAIR|locus:2050110 - symbol:AT2G21500 species:3702 "Arabi... 730 3.2e-72 1
TAIR|locus:2018404 - symbol:AT1G75400 species:3702 "Arabi... 636 3.0e-62 1
TAIR|locus:2013114 - symbol:AT1G19680 species:3702 "Arabi... 540 4.4e-52 1
TAIR|locus:2035819 - symbol:AT1G14180 species:3702 "Arabi... 112 4.3e-07 2
TAIR|locus:2172314 - symbol:AT5G18260 species:3702 "Arabi... 115 0.00048 1
>TAIR|locus:2136368 [details] [associations]
symbol:AT4G39140 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009610 "response to symbiotic fungus"
evidence=RCA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002687 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161594 EMBL:AL050351 HOGENOM:HOG000237740
ProtClustDB:CLSN2682515 EMBL:AY062602 EMBL:AY128790 EMBL:DQ059127
IPI:IPI00532731 PIR:T08562 RefSeq:NP_001078514.1 RefSeq:NP_195625.1
RefSeq:NP_849522.1 RefSeq:NP_974711.1 RefSeq:NP_974712.1
UniGene:At.27287 ProteinModelPortal:Q9T023 SMR:Q9T023
EnsemblPlants:AT4G39140.1 EnsemblPlants:AT4G39140.2
EnsemblPlants:AT4G39140.3 EnsemblPlants:AT4G39140.4
EnsemblPlants:AT4G39140.5 GeneID:830069 KEGG:ath:AT4G39140
TAIR:At4g39140 InParanoid:Q9T023 OMA:NDGSEIK PhylomeDB:Q9T023
Genevestigator:Q9T023 Uniprot:Q9T023
Length = 429
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 188/451 (41%), Positives = 249/451 (55%)
Query: 1 MGAACCVAARDKTITSSTSA-DILHR-NIRYSPTWSFRWDHRGRVAGEETAVAWFPDGIS 58
MG ACCVAARDK + ++SA + L R NIR+SP+WSFRWD+RGRVAGEET+++W DGIS
Sbjct: 1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGEETSLSWLSDGIS 60
Query: 59 RNDRSDIKYESAYASEEGSPLDSFPRHTWQKSPVSEGTAAGNVRTPTSDHSLSRNISMDV 118
RND S+IK+ESA+ S EGSPLDSF T QKSP S D S RN SM+
Sbjct: 61 RNDGSEIKFESAFVSSEGSPLDSFRTQTLQKSPAS-------------DLSFPRNSSMNT 107
Query: 119 NLEQVKE-STDSQEVXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXYPASSTTAKWPRHSP 176
EQ + ST+S +PASS+T K +H P
Sbjct: 108 VFEQKENVSTESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLHPASSSTLKLTQH-P 166
Query: 177 GHPLLRQASDSRIPGLKSVNGYSVREERPVIPSWXXXXXXXXXXXXXXXXXMNAFSELMA 236
L +Q SD +I G S++ S EER P+ + AFSE+M+
Sbjct: 167 R--LSKQVSDGQIYGQNSLSRSSATEERQGTPT----RYDSSQSGPSEGWSLQAFSEMMS 220
Query: 237 TSHKERW----SFDSESLGFNHEKIXXXXXXXXXXXXXDMQTCGVCSKLLSE-------- 284
+S + ++D++ G +KI TCG CS+ LSE
Sbjct: 221 SSRSNKALSYDNYDNDCFGLQRDKIDHHGNRMSKH---QQHTCGACSRPLSEKSLWSSQK 277
Query: 285 ------LCVVAVLTCGHLYHADCLENITAEINKYDPACPVCTLGEKKTHKLSERALKSEM 338
L V A+L CGH+YH +CLE +T EI+K+DP+CP+CT+GEKKT KLSE+ALK EM
Sbjct: 278 IFMTNELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSEKALKVEM 337
Query: 339 ESKARNNKRWKNRIVDSNLDSNSVVL-DR-HKGSWNEGKGPKMAXXXXXXXXXGKPFLKR 396
+ KAR+NKR +NR++DS+ D + V+ D H+ + K P++ KPFL R
Sbjct: 338 DLKARHNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYSAKPFLAR 397
Query: 397 HFSFGSKGS-RSLSENHSTWKKGFFWPKSSR 426
HFSFGS+ + +S EN KKGFFW KSS+
Sbjct: 398 HFSFGSRSNYKSPKENLPVKKKGFFWTKSSK 428
>TAIR|locus:2050110 [details] [associations]
symbol:AT2G21500 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 GO:GO:0005886
EMBL:CP002685 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000237740 ProtClustDB:CLSN2682515
EMBL:AY093117 EMBL:BT008513 IPI:IPI00527015 RefSeq:NP_850013.1
RefSeq:NP_850014.1 UniGene:At.39561 ProteinModelPortal:Q8RWF9
PRIDE:Q8RWF9 EnsemblPlants:AT2G21500.1 EnsemblPlants:AT2G21500.2
GeneID:816689 KEGG:ath:AT2G21500 TAIR:At2g21500 InParanoid:Q8RWF9
OMA:MAYSRRE PhylomeDB:Q8RWF9 Genevestigator:Q8RWF9 Uniprot:Q8RWF9
Length = 421
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 186/454 (40%), Positives = 239/454 (52%)
Query: 1 MGAACCVAARDKTITSSTSA--DILHRNIRYSPTWSFRWDHRG-RVAGEETAVAWFPDGI 57
MG ACCVA RDK + +TSA + N+RYSP WSFRWD+RG RVAGEET+V+ D I
Sbjct: 1 MGNACCVATRDKMVVPNTSAVENFQRNNVRYSPNWSFRWDNRGGRVAGEETSVSLLSDRI 60
Query: 58 SRNDRSDIKYESAYASEEGSPLDSFPRHTWQKSPVSEGTAAGNVRTPTSDHSLSRNISMD 117
SRND SD+K E+A S +GSPLD+F +WQKSP S D S SR S+D
Sbjct: 61 SRNDVSDVKSETALVSSQGSPLDNFQTQSWQKSPAS-------------DQSFSRIASID 107
Query: 118 VNLEQVKEST-DSQEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXY----PASSTTAKWP 172
EQ+ + T DS + + PASS+ K
Sbjct: 108 SVSEQITQKTNDSTDPTYYPSPAKLSLSLASQPSSFSVSPLSSQSHLPMPPASSSQLKL- 166
Query: 173 RHSPGHPLLRQASDSRIPGLKSVNGYSVREERPVIPSWXXXXXXXXXXXXXXXXXMNAFS 232
+P L +Q S +I G S + S EER M AFS
Sbjct: 167 --TPPPRLSKQVSYGQIFGFTSPSRSSATEER------------LGNESQSDGWSMQAFS 212
Query: 233 ELMATSHKERWSFDSESLGFNHEKIXXXXXXXXXXXXXDMQTCGVCSKLLSE-------- 284
E+MA S +E S+D+E G +KI D Q CG CS+ LSE
Sbjct: 213 EMMAYSRRESCSYDNECFGLRRDKIDNLGSRKSN----DQQNCGACSRSLSEKSLLSSQK 268
Query: 285 ------LCVVAVLTCGHLYHADCLENITAEINKYDPACPVCTLGEKKTHKLSERALKSEM 338
L V A+L CGH+YH++CLE +T EI+K+DP+CP+CTLGEKKT KLSE+ALK+++
Sbjct: 269 IFATNELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICTLGEKKTFKLSEKALKADL 328
Query: 339 ESKARNNKRWKNRIVDSNLDSNSVVLDRHKGSWN-EGKGPKMAXXXXXXXXXGKPFLKRH 397
E KAR+NKR +NR+VDS D + H+ + +GK PK+ KPFL RH
Sbjct: 329 EMKARHNKRLRNRVVDS--DEFVKFNNNHEAAVGYKGKTPKLISSSSLRSYSPKPFLARH 386
Query: 398 FSFGSKGS--RSLSENHSTW---KKGFFWPKSSR 426
FSFGS+ + +S E HS KKGFFW KSS+
Sbjct: 387 FSFGSRSNSVKSPKEIHSPSSLRKKGFFWTKSSK 420
>TAIR|locus:2018404 [details] [associations]
symbol:AT1G75400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AY128403 EMBL:BT000078
EMBL:AK117693 IPI:IPI00534953 RefSeq:NP_177673.1 UniGene:At.34780
ProteinModelPortal:Q8L7K7 SMR:Q8L7K7 IntAct:Q8L7K7
EnsemblPlants:AT1G75400.1 GeneID:843876 KEGG:ath:AT1G75400
TAIR:At1g75400 eggNOG:NOG273109 HOGENOM:HOG000237740
InParanoid:Q8L7K7 OMA:PACPICT PhylomeDB:Q8L7K7
ProtClustDB:CLSN2682515 ArrayExpress:Q8L7K7 Genevestigator:Q8L7K7
Uniprot:Q8L7K7
Length = 455
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 167/444 (37%), Positives = 221/444 (49%)
Query: 1 MGAACCVAARDKTITSS--TSADILHRNIRYSPTWSFRWDHRGRVAGE-ETAVAWFPDGI 57
MG+ CCVA +D+ + S ++ +HRN SP WSFR D+R RVA E E + + P
Sbjct: 1 MGSVCCVAVKDRKVPPSGGPASSSVHRNSACSPQWSFRRDNRRRVADEIEGSPYYSPYVA 60
Query: 58 SRN---DRSDIKYESAYASEEGSPLDS-FPRHTWQKSPVSEGTAAGNVRTPTSDHSLSRN 113
SR D+ + E SE G+P D QKS E + ++ P+S SL+
Sbjct: 61 SRGISMDKMSLGSERGTLSEGGTPPDGHLGTPASQKSATPE-MSTNSMVPPSSGSSLA-- 117
Query: 114 ISMDVNLEQVKESTDSQEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPASSTTAKWPR 173
S D L +VK DS + P ST ++ R
Sbjct: 118 -SSD--LIEVKNLVDSPGIVPSAQSKPLFSTPSLPNPVSDLSSAHTRLLPPKSTPSRRAR 174
Query: 174 HSPGHPLLRQASDSRIPGLKS-VNGYSVREERP--VIPSWXXXXXXXXXXXXXXXX-XMN 229
SPGH L RQ SDS+I GLKS +N YS+ E R V+ + MN
Sbjct: 175 RSPGHQLFRQVSDSQILGLKSPINNYSISEGRSSFVLSTCSNDFATGSQYASSEGGWSMN 234
Query: 230 AFSELMATSHKERWSFDSESLGFNHEKIXXXXXXXXXX-XXXDMQTCGVCSKLLSE---- 284
FSEL+A S ++RWSFDSE LG K+ D Q CG CSKLL+E
Sbjct: 235 TFSELVAYSQRDRWSFDSEHLGSGRRKLSGGSSRFSFSPSVVDQQVCGACSKLLTERSSI 294
Query: 285 ----LCVVAVLTCGHLYHADCLENITAEINKYDPACPVCTLGEKKTHKLSERALKSEMES 340
L + AVL CGH+YHA+CLE +T +I KYDPACP+CT+GEK+ K++ +ALK+E E+
Sbjct: 295 ATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPICTIGEKRVAKITRKALKAEAEA 354
Query: 341 KARNNKRWKNRIVDSNLDSNSVVLDRHKGSWNEGKGPKMAXXXXXXXXXGKPFLKRHF-S 399
KA+ KR KNR+VDS +S K EGK K+ K FLK HF S
Sbjct: 355 KAKQYKRCKNRVVDSYGESECDEFVFQKMGKREGKALKLEASCSSKSSSNKSFLKWHFAS 414
Query: 400 FGSKGSRSLSENHSTWKKGFFWPK 423
SK ++ S++ S KKGF W +
Sbjct: 415 ISSKWNKPSSKD-SALKKGF-WSR 436
>TAIR|locus:2013114 [details] [associations]
symbol:AT1G19680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC007797 UniGene:At.41738 UniGene:At.68550
HOGENOM:HOG000237740 ProtClustDB:CLSN2682515 EMBL:DQ059098
EMBL:BT029170 IPI:IPI00535581 PIR:F86329 RefSeq:NP_173398.2
ProteinModelPortal:Q9FXG6 SMR:Q9FXG6 IntAct:Q9FXG6 STRING:Q9FXG6
EnsemblPlants:AT1G19680.1 GeneID:838555 KEGG:ath:AT1G19680
TAIR:At1g19680 InParanoid:Q9FXG6 OMA:RSECEDL PhylomeDB:Q9FXG6
Genevestigator:Q9FXG6 Uniprot:Q9FXG6
Length = 444
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 162/445 (36%), Positives = 205/445 (46%)
Query: 1 MGAACCVAARDKTITSSTSADILHRNIRYSPTWSFRWDHRGRVAGEETAVAWFPDGISRN 60
MG+ CCVAA+D+ + S + D N SP+WSFR D+R RVA E + G SR
Sbjct: 1 MGSVCCVAAKDRNVPSG-AID----NSVCSPSWSFRRDNRRRVADEIKDSSNHNVG-SRG 54
Query: 61 ---DRSDIKYESAYASEEGSPLDSFPRHTWQKSPVSEGTAAGNVRTPTSDHSLSRNISMD 117
D+ + E S E L + QKS SE A V P + SL+ D
Sbjct: 55 IDIDKLSLGLERGPPSSETGGLATLGS---QKSADSEMGTASMVTAPLAGTSLAIRSPSD 111
Query: 118 VNLE-----QVKESTDSQEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYPASSTTAKWP 172
V+L +VK DS ++ P ST ++
Sbjct: 112 VSLASPVRVEVKNIVDSSDIVSSVLPNPSSSTSVSDLPSAHTHSL-----PPRSTPSRRA 166
Query: 173 RHSPGHPLLRQASDSRIPGLKSVNGYSVREERP--VIPSWXXXXXXXXXXXXXXXX-XMN 229
R SPG L RQ SDS+ GLKS N YS E R V+ + +N
Sbjct: 167 RGSPGQQLFRQVSDSQTLGLKSPNNYSTSEGRSSFVLSTCSNDTATGSHFASSEGGWSIN 226
Query: 230 AFSELMATSHKERWSFDSESLGFNHEKIXXXXXXXXXXX-XXDMQTCGVCSKLLSE---- 284
AF EL+A S +ERWSFD+E LG ++ D QTCG CSKLL+E
Sbjct: 227 AFCELVAQSQRERWSFDNEHLGSGRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTERSPV 286
Query: 285 ----LCVVAVLTCGHLYHADCLENITAEINKYDPACPVCTLGEKKTHKLSERALKSEMES 340
L + AVL CGH+YHA CLE +T E KYDP CP+CT E + KLS +ALK+E E
Sbjct: 287 ARFDLPIPAVLACGHVYHAACLETMTNETEKYDPTCPICT--ETQVTKLSRKALKAEAEL 344
Query: 341 KARNNKRWKNRIVDSNLDSNSVVLDRHKGSWNEGKGPKMAXXXXXXXXXGKPFLKRHFSF 400
KA + KR KNR+VDS + S L EGKG KM K F+K HF
Sbjct: 345 KATSYKRCKNRVVDSYVRSECEDLMFQNLGKREGKGLKMDPSSNTKGSTSKSFMKWHF-- 402
Query: 401 GSKGSRSLSENHSTWKKGFFWPKSS 425
GS ++ ST KK F W + S
Sbjct: 403 GSVSTKWSKARDSTSKKSF-WSRHS 426
>TAIR|locus:2035819 [details] [associations]
symbol:AT1G14180 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
[GO:0048451 "petal formation" evidence=RCA] [GO:0048453 "sepal
formation" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016829 EMBL:AK117979
IPI:IPI00944286 RefSeq:NP_563938.5 UniGene:At.41986
ProteinModelPortal:Q8GXX6 SMR:Q8GXX6 EnsemblPlants:AT1G14180.1
GeneID:837977 KEGG:ath:AT1G14180 TAIR:At1g14180 eggNOG:NOG237450
HOGENOM:HOG000243433 OMA:SADACSW PhylomeDB:Q8GXX6
ProtClustDB:CLSN2723367 Genevestigator:Q8GXX6 Uniprot:Q8GXX6
Length = 348
Score = 112 (44.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 284 ELCVVAVLTCGHLYHADCLENITAEINKYDPACPVCTLGEKKTHK 328
++ V VL+C H++H +CL+ T +I + DP CP+CT E + K
Sbjct: 208 DMPVTGVLSCQHVFHVECLDQSTPKIQRNDPLCPICTKQEGEHFK 252
Score = 73 (30.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 1 MGAACCVAARDKTITSSTSADI---LHR-----NIRYSPTWSFRWDHRGRVAG 45
MG+ CCVAA+ ++STS D LH N +SP S RWD G + G
Sbjct: 1 MGSLCCVAAKSDR-SNSTSGDFSFGLHEPYWRTNTSFSPP-SSRWDVHGLMDG 51
>TAIR|locus:2172314 [details] [associations]
symbol:AT5G18260 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB012246 EMBL:AY072182
EMBL:AY096474 IPI:IPI00529296 RefSeq:NP_197327.1 UniGene:At.31453
UniGene:At.67585 SMR:Q9FK45 IntAct:Q9FK45 EnsemblPlants:AT5G18260.1
GeneID:831944 KEGG:ath:AT5G18260 TAIR:At5g18260 eggNOG:NOG286120
HOGENOM:HOG000152515 InParanoid:Q9FK45 OMA:NEENGFD
ProtClustDB:CLSN2916318 Genevestigator:Q9FK45 Uniprot:Q9FK45
Length = 320
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 27/88 (30%), Positives = 41/88 (46%)
Query: 273 QTCGVCSKLLSE--------------LCVVAVLTCGHLYHADCLENITAEINKYDPACPV 318
Q CG+C KLLS+ + V C H+YH +CL+ T DP+CPV
Sbjct: 190 QRCGICKKLLSQKSPWSSYKILRSRDMPATGVFPCHHVYHVECLDKATPTAQTRDPSCPV 249
Query: 319 C--TLGEKKTHKLSERALKSEMESKARN 344
C T+G + ++ L+ + S R+
Sbjct: 250 CSNTIGVMEQPLIAPETLQMALRSLRRS 277
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.127 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 427 359 0.00081 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 625 (66 KB)
Total size of DFA: 275 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.79u 0.13s 27.92t Elapsed: 00:00:01
Total cpu time: 27.80u 0.13s 27.93t Elapsed: 00:00:01
Start: Fri May 10 12:17:11 2013 End: Fri May 10 12:17:12 2013