Query 014292
Match_columns 427
No_of_seqs 169 out of 1307
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:57:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014292.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014292hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vgl_M AP-2 complex subunit MU 100.0 4E-93 1.4E-97 729.4 52.1 404 1-427 1-435 (435)
2 1w63_M Adaptor-related protein 100.0 7.5E-93 2.6E-97 724.9 43.6 402 1-427 2-422 (423)
3 1i31_A Clathrin coat assembly 100.0 3.6E-68 1.2E-72 521.3 32.8 283 124-427 1-314 (314)
4 4en2_M AP-1 complex subunit MU 100.0 1.5E-64 5.3E-69 483.6 27.9 246 168-427 1-265 (266)
5 3ml6_A Chimeric complex betwee 100.0 3.9E-62 1.3E-66 489.0 33.7 250 163-427 101-385 (385)
6 3l81_A AP-4 complex subunit MU 100.0 6.5E-62 2.2E-66 472.7 29.3 251 162-427 17-301 (301)
7 1w63_Q Adapter-related protein 100.0 6.3E-31 2.2E-35 232.2 14.3 140 1-143 1-143 (158)
8 2vgl_S AP-2 complex subunit si 100.0 6.7E-30 2.3E-34 222.0 13.2 136 1-138 1-139 (142)
9 3tjz_C Coatomer subunit zeta-1 100.0 1.4E-28 4.7E-33 215.4 16.5 133 1-139 12-150 (153)
10 3g9h_A Suppressor of yeast pro 99.1 3.5E-07 1.2E-11 87.9 29.9 202 178-404 67-301 (328)
11 4b93_A Vesicle-associated memb 92.2 1 3.4E-05 39.9 10.5 84 10-97 10-93 (189)
12 2nut_C Vesicle-trafficking pro 91.9 1.8 6.3E-05 38.2 11.9 96 1-97 2-102 (196)
13 2vx8_A Nucleoporin-like protei 91.7 1.6 5.3E-05 37.9 10.8 87 6-97 49-135 (169)
14 4afi_A AP-3 complex subunit de 90.6 2.6 9E-05 36.6 11.2 83 11-97 63-145 (173)
15 3cpt_A Mitogen-activated prote 86.8 6.6 0.00023 32.8 10.4 90 2-93 38-135 (143)
16 3cue_A Transport protein parti 82.8 18 0.00063 32.4 12.3 22 1-22 2-23 (219)
17 3bw6_A Synaptobrevin homolog Y 82.7 19 0.00065 29.9 11.9 94 2-96 7-110 (144)
18 3kyq_A YKT6, synaptobrevin hom 82.5 13 0.00046 32.8 11.4 94 2-96 4-107 (199)
19 1nrj_A Signal recognition part 82.0 4.6 0.00016 33.6 7.3 41 1-41 1-41 (158)
20 2j3t_C Trafficking protein par 80.7 12 0.00042 31.3 9.9 91 1-95 2-109 (145)
21 2fh5_A Signal recognition part 77.9 19 0.00065 31.4 10.5 93 1-96 10-104 (185)
22 3cue_C Transport protein parti 61.4 35 0.0012 28.9 8.4 90 1-95 2-115 (159)
23 2j3w_A Sedlin, trafficking pro 51.0 1E+02 0.0035 25.3 11.4 92 2-95 6-112 (142)
24 3vjz_A DMP19, putative unchara 32.6 10 0.00035 32.5 0.3 52 74-125 10-67 (166)
No 1
>2vgl_M AP-2 complex subunit MU-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2jkr_M 2jkt_M 2bp5_M* 2xa7_M
Probab=100.00 E-value=4e-93 Score=729.35 Aligned_cols=404 Identities=26% Similarity=0.501 Sum_probs=356.9
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChhHH
Q 014292 1 MLQCIFLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPLMG 80 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~n~l~~ 80 (427)
||+++||+|++|+++++|+|++ +.++..++.|.+++....+ .+.+|+++.+++.++|+++++|||+++++.++|++++
T Consensus 1 MI~~i~I~~~~Gk~~l~k~y~~-~~~~~~~~~f~~~v~~~~~-~~~~~ii~~~~~~~vy~~~~~Lyfv~~~~~~~n~l~~ 78 (435)
T 2vgl_M 1 MIGGLFIYNHKGEVLISRVYRD-DIGRNAVDAFRVNVIHARQ-QVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMV 78 (435)
T ss_dssp CCCEEEEECTTCCEEEEEECSS-SCCHHHHHHHHHHTTTCSS-CCCCSEEEETTEEEEEEEETTEEEEEEESSCCCHHHH
T ss_pred CeEEEEEECCCCCEEEEEecCC-CCChhHHHHHHHHHhcccc-CCCCCEEEECCEEEEEEEECCEEEEEEecCCCCHHHH
Confidence 9999999999999999999998 8888889999998886533 3678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCHHHHHhhHHHHHHHHHHHHhCCcccccChhhHhhccCCCcccccccccccCCCCCccCCCC
Q 014292 81 IEFLCRVADILSDYLGELNEDLIKDNFVIVYELLDEMIDNGFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNVSDILP 160 (427)
Q Consensus 81 ~~~L~~~~~~l~~y~~~l~e~~i~~N~~~v~~lldEiid~G~p~~t~~~~l~~~i~~~~~~~k~~~~~~g~~~~~~~~~~ 160 (427)
++|||+|+++|++|||+++|++|++||++||++||||+|+|+|++|++++|++++.++++..++... .+ ....+
T Consensus 79 le~L~~~v~vl~~yf~~v~E~~I~~Nf~~vy~lLDE~id~G~~~~t~~~~l~~~i~~~~~~~~~~~~-~~-----~~~~~ 152 (435)
T 2vgl_M 79 FEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTK-EE-----QSQIT 152 (435)
T ss_dssp HHHHHHHHHHHHHHHSSCCHHHHHHTHHHHHHHHHHHEETTEECCCCHHHHGGGCCCCCCCCC-----------------
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHhHHHHHHHHHHHhcCCEEEecCHHHHHHHhcccccccccccc-cc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999987765311 11 12334
Q ss_pred CCCCcCCcccCCCCCcccceEEEEEEEeEeEEEecccccccccccCCCCcEEEEEEEEEEEEEEeecCCCeEEEEecCC-
Q 014292 161 GATASCVPWRPTDVKYANNEVYVDLVEEMDAIINSTKQFSLLHARFRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANP- 239 (427)
Q Consensus 161 ~~~~~~~~WR~~~~~~~~nei~vdv~E~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~G~i~~~s~LsG~P~~~l~ln~~- 239 (427)
++.++++|||+.|++|++|||||||+|+++++++ ++|.+++++|.|.|.|+|+|+|||+|+|+||++
T Consensus 153 ~~~~~~i~wr~~gi~~~~nei~vdV~E~v~~~~~------------~~G~v~~~eV~G~I~~~~~LsG~P~~~l~ln~~~ 220 (435)
T 2vgl_M 153 SQVTGQIGWRREGIKYRRNELFLDVLESVNLLMS------------PQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKI 220 (435)
T ss_dssp ------CCSSCSCCCCSSCEEEEEEEEEEEEEEC------------TTCCEEEEEEEEEEEEEEECSSCCEEEEEECSSS
T ss_pred cccccccccccccCCcCcceEEEEEEEEEEEEEc------------CCCCEEEEEEEEEEEEEEEeCCCCeEEEEeCchh
Confidence 5567889999999999999999999999999999 999999999999999999999999999999874
Q ss_pred --------------------CccccceecceeecCCcCCCceEEEeCCCCeEEEEEEEecCCCCCCEEEEEEEEEcCCcc
Q 014292 240 --------------------SILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTC 299 (427)
Q Consensus 240 --------------------~~l~~~~fH~cV~~~~~~~~~~l~F~PPdG~f~L~~Y~~~~~~~~P~~v~~~~~~~~~~~ 299 (427)
..++||+|||||++++|+++|.|+|+||||+|+||+||++.+..+||.++|+++. .+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~d~~fH~cV~~~~f~~~r~isF~PPdg~F~Lm~Yr~~~~~~~P~~i~~~~~~-~~~~ 299 (435)
T 2vgl_M 221 VIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVRE-VGRT 299 (435)
T ss_dssp CC-----------------CCCCCEEEECTTEEEC-----CCEEECCCSEEEEEEEEEECSSCCCSEEEEEEEEC-CTTT
T ss_pred hcccccccccccccccccCceEccccccceeecHhHhccCceEEEECCCCcEEEEEEEecCCcCCCeEEEEEEEe-cCCC
Confidence 2578999999999999999999999999999999999999888899999999984 3457
Q ss_pred EEEEEEEeecCCCC--ceeeEEEEEeCCCCceeeEEEeccccceeEeC--cEEEEEeCCcCCCCceEEEEEEEeecCC-C
Q 014292 300 RISVMVGIRNDPGK--TIDSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTWSIGRIPKDKAPSLSGTMVLETGL-E 374 (427)
Q Consensus 300 ~~ei~l~~~~~~~~--~~~~v~i~ip~p~~~~~~~~~~~~G~~~~~~~--~~l~W~I~~~~~~~~~~l~g~i~~~~~~-~ 374 (427)
++|++++++++++. .+++|.|+||+|+.+.++++++++|++ +|++ ++++|+|++++++.+++++|+++|.+.. .
T Consensus 300 ~ve~~l~~~~~~~~~~~~~~V~I~IP~P~~~~~~~~~~~~G~~-~y~~~~~~l~W~I~~~~~~~~~~l~~~~~l~~~~~~ 378 (435)
T 2vgl_M 300 KLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKA-KYKASENAIVWKIKRMAGMKESQISAEIELLPTNDK 378 (435)
T ss_dssp EEEEEEEEEECSCTTSEEEEEEEEEECCSSCCCEEEEESSSEE-EEETTTTEEEEEEEEEETTCEEEEEEEEECCCCSCS
T ss_pred EEEEEEEEeCCCCCCceeeEEEEEEECCCCCCCceEEecceeE-EEccCCCEEEEEeccCCCCCCEEEEEEEEecCCCcC
Confidence 89999999876643 699999999999999999999999999 9988 9999999999999999999999997643 3
Q ss_pred CCCCCCcEEEEEEECceeccccEEeEEEeecC-----CCccccceEEEEecccEEEcC
Q 014292 375 TLRVFPTFQVEFRIMGVALSGLQIDKLDLQNV-----PNRLYKGFRAVTRAGEYEVRS 427 (427)
Q Consensus 375 ~~~~~~~i~v~F~~~~~~~SGl~V~~l~v~~~-----~~~~~k~vry~t~sg~y~iR~ 427 (427)
..+.++||+|+|++| +++||++|++|+|.+. +|+|+|||||+|+||+|++|+
T Consensus 379 ~~~~~~pi~v~F~i~-~t~Sgl~V~~l~v~~~~~~~~~y~~~kwVrY~t~sg~y~~R~ 435 (435)
T 2vgl_M 379 KKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435 (435)
T ss_dssp CCCCCCCEEEEEEES-SCTTCCCEEEEEEECSSSSCBGGGSEEEEEEEEEEEEEEECC
T ss_pred cccCCCcEEEEEEEE-ecccccEEEEEEEeccccccCCCCCcCceEEEEeCCeEEEcC
Confidence 456789999999999 9999999999999543 799999999999999999996
No 2
>1w63_M Adaptor-related protein complex 1, MU 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=100.00 E-value=7.5e-93 Score=724.88 Aligned_cols=402 Identities=28% Similarity=0.519 Sum_probs=357.6
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChhHH
Q 014292 1 MLQCIFLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPLMG 80 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~n~l~~ 80 (427)
||+++||+|++|+++++|+|++ +.++..++.|.+++.+..+..+.+|+++.++++++|+++++|||+++++.++|++++
T Consensus 2 MI~~i~I~~~~Gk~~l~k~y~~-~~~~~~~~~f~~~v~~~~~~~~~~~~i~~~~~~~vy~~~~~Lyfv~~~~~~~n~l~~ 80 (423)
T 1w63_M 2 SASAVYVLDLKGKVLICRNYRG-DVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLV 80 (423)
T ss_dssp CCCEEEEEETTTEECSCBCCSC-SCTTTTHHHHHHHHHHHHHTSCCCSEEEETTEEEEEEEETTEEEEEEESSCCCTHHH
T ss_pred ceEEEEEECCCCCEEEEEecCC-CCChHHHHHHHHHHhhccccCCCCCEEEECCEEEEEEEECCEEEEEEecCCCCHHHH
Confidence 9999999999999999999998 888888999999988652213578999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCHHHHHhhHHHHHHHHHHHHhCCcccccChhhHhhccCCCcccccccccccCCCCCccCCCC
Q 014292 81 IEFLCRVADILSDYLGELNEDLIKDNFVIVYELLDEMIDNGFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNVSDILP 160 (427)
Q Consensus 81 ~~~L~~~~~~l~~y~~~l~e~~i~~N~~~v~~lldEiid~G~p~~t~~~~l~~~i~~~~~~~k~~~~~~g~~~~~~~~~~ 160 (427)
++|||+|+++|++|||+++|++|++||+++|++||||+|+|+|++|++++|+++|.++++.. + . ++ ...+
T Consensus 81 le~L~~~v~~l~~yf~~v~E~~I~~Nf~~vy~lLDE~id~G~~~~t~~~~l~~~i~~~~~~~---~---~-~~---~~~~ 150 (423)
T 1w63_M 81 FSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEFITQEGHKL---E---T-GA---PRPP 150 (423)
T ss_dssp HHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHHHHHHCSSSSCCCCCSTTTTTTCCSCCCCC---C---C-C--------
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHhcCCEEeecCHHHHHHhhcCCCccc---c---c-cc---cCCc
Confidence 99999999999999999999999999999999999999999999999999999999998752 1 0 00 1223
Q ss_pred CCCCcCCcccCCCCCcccceEEEEEEEeEeEEEecccccccccccCCCCcEEEEEEEEEEEEEEeecCCCeEEEEecCCC
Q 014292 161 GATASCVPWRPTDVKYANNEVYVDLVEEMDAIINSTKQFSLLHARFRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANPS 240 (427)
Q Consensus 161 ~~~~~~~~WR~~~~~~~~nei~vdv~E~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~G~i~~~s~LsG~P~~~l~ln~~~ 240 (427)
++.++++|||+.|++|++|||||||+|+|+++++ ++|.+++++|.|.|.|+|+|+|+|+|+|+||++.
T Consensus 151 ~~~~~~i~wr~~g~~~~~nei~vdV~E~v~~~~~------------~~G~v~~~eV~G~I~~~~~LsG~P~~~l~Ln~~~ 218 (423)
T 1w63_M 151 ATVTNAVSWRSEGIKYRKNEVFLDVIEAVNLLVS------------ANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKV 218 (423)
T ss_dssp ------CCSSCSSCCCSSCEEEEEEEEEEEEEEE------------TTTEEEEEEEEEEEEEEEECSSCCEEEEEECSCC
T ss_pred ccccCCCCccccCCccccceEEEEEEEEEEEEEC------------CCCCEEEEEEEEEEEEEEEeCCCCeEEEEECCcc
Confidence 4556789999999999999999999999999999 9999999999999999999999999999999985
Q ss_pred -------------ccccceecceeecCCcCCCceEEEeCCCCeEEEEEEEecCCCCCCEEEEEEEEEcCCccEEEEEEEe
Q 014292 241 -------------ILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGI 307 (427)
Q Consensus 241 -------------~l~~~~fH~cV~~~~~~~~~~l~F~PPdG~f~L~~Y~~~~~~~~P~~v~~~~~~~~~~~~~ei~l~~ 307 (427)
.++||+|||||++++|+++|.|+|+||||+|+||+||++....+||.++||++.. +++++|+++++
T Consensus 219 ~~~~~~~~~~~~v~l~d~~fHpcV~~~~f~~~r~isf~PPdg~F~Lm~Yr~~~~~~~P~~i~~~~~~~-~~~~ve~~l~~ 297 (423)
T 1w63_M 219 LFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKH-SHSRIEYMVKA 297 (423)
T ss_dssp -------------CEEEEEECTTEEESSSSSCCEEEECCCSEEEEEEEEEEECCCCCTTCCEEEEEEE-TTTEEEEEEEE
T ss_pred ccccccccccCceEcccccccccccHHHhCCCCeEEEECCCCcEEEEEEEecCCcCCCEEEEEEEEec-CCCEEEEEEEE
Confidence 5899999999999999999999999999999999999998888999999999854 46799999999
Q ss_pred ecCCCC--ceeeEEEEEeCCCCceeeEEEeccccceeEeC--cEEEEEeCCcCCCCceEEEEEEEeecCC-CCCCCCCcE
Q 014292 308 RNDPGK--TIDSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTWSIGRIPKDKAPSLSGTMVLETGL-ETLRVFPTF 382 (427)
Q Consensus 308 ~~~~~~--~~~~v~i~ip~p~~~~~~~~~~~~G~~~~~~~--~~l~W~I~~~~~~~~~~l~g~i~~~~~~-~~~~~~~~i 382 (427)
+++++. .+++|.|+||+|+.+.++++++++|++ +|++ +.++|+|++++++.+++++|++++.+.. ..++.++||
T Consensus 298 ~~~~~~~~~~~~V~I~IP~P~~~~~~~~~~~~G~~-~y~~~~~~l~W~I~~i~~~~~~~l~~~~~l~~~~~~~~~~~~pi 376 (423)
T 1w63_M 298 KSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSV-KWVPENSEIVWSVKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPI 376 (423)
T ss_dssp ECCSCTTSEEESCEEEEECCTTCCCCEEEESSSEE-EEETGGGEEEEECSEEETTCEEEEEEEEEC----------CCCE
T ss_pred cccCCCcceeeEEEEEEeCCCCcccceEEecCccE-EEecCCCEEEEEeCcCCCCCcEEEEEEEEccCCCcccccCCCcE
Confidence 886644 699999999999999999999999999 9998 9999999999999999999999996543 245679999
Q ss_pred EEEEEECceeccccEEeEEEeec-CCCccccceEEEEecccEEEcC
Q 014292 383 QVEFRIMGVALSGLQIDKLDLQN-VPNRLYKGFRAVTRAGEYEVRS 427 (427)
Q Consensus 383 ~v~F~~~~~~~SGl~V~~l~v~~-~~~~~~k~vry~t~sg~y~iR~ 427 (427)
+|+|++|++++||++|++|+|.+ .+|+|+|||||+|+||+|++|+
T Consensus 377 ~v~F~i~~~t~Sgl~V~~l~v~~~~~y~~~kwVrY~t~sg~y~~R~ 422 (423)
T 1w63_M 377 SVKFEIPYFTTSGIQVRYLKIIEKSGYQAIPWVRYITQNGDYQLRT 422 (423)
T ss_dssp EEEBCCSSCCTTCCCEEEEEEECSSCCCCEEEEEEEEEBSCEEECC
T ss_pred EEEEEECCEeCCCCEEEEEEeEccCCCCCcCceEEEEeCCcEEEec
Confidence 99999999999999999999965 4799999999999999999996
No 3
>1i31_A Clathrin coat assembly protein AP50; beta-sandwich, peptide-binding site, protein-peptide complex, clathrin adaptor; 2.50A {Rattus norvegicus} SCOP: b.2.7.1 PDB: 1bw8_A 2pr9_A 3h85_A 1bxx_A 1hes_A 1h6e_A
Probab=100.00 E-value=3.6e-68 Score=521.29 Aligned_cols=283 Identities=24% Similarity=0.458 Sum_probs=225.3
Q ss_pred cccChhhHhhccCCCcccccccccccCCCCCccCCCCCCCCcCCcccCCCCCcccceEEEEEEEeEeEEEeccccccccc
Q 014292 124 LTTEPNILREMIAPPNIVSKMLSVVTGNSSNVSDILPGATASCVPWRPTDVKYANNEVYVDLVEEMDAIINSTKQFSLLH 203 (427)
Q Consensus 124 ~~t~~~~l~~~i~~~~~~~k~~~~~~g~~~~~~~~~~~~~~~~~~WR~~~~~~~~nei~vdv~E~i~~~~~~~~~~~~~~ 203 (427)
|.||++.||++|..+++..+... ...+...|++.++++|||+.|++|++|||||||+|+|+++++
T Consensus 1 q~te~~~Lk~~i~~~~~~~~~~~------~~~~~~~~~~~~~~v~WR~~gi~y~~NEi~vdV~E~v~~~i~--------- 65 (314)
T 1i31_A 1 QNSETGALKTFITQQGIKSQHQT------KEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLMS--------- 65 (314)
T ss_dssp -------------------------------------------CTTSCSCCCCSSCEEEEEEEEEEEEEEC---------
T ss_pred CcCChHHHHHhhcCCCeeccccc------cccccCCCccccCCCCCCccCCccccceEEEEEEEEEEEEEC---------
Confidence 57999999999999997654321 011234566778899999999999999999999999999999
Q ss_pred ccCCCCcEEEEEEEEEEEEEEeecCCCeEEEEecCC---------------------CccccceecceeecCCcCCCceE
Q 014292 204 ARFRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANP---------------------SILHDVRFHPCVRFRPWESHQIL 262 (427)
Q Consensus 204 ~~~~~g~~~~~~i~G~i~~~s~LsG~P~~~l~ln~~---------------------~~l~~~~fH~cV~~~~~~~~~~l 262 (427)
++|.+++++|.|.|.|+|+|+|||+|+|+||++ ..|+||+|||||++++|+++|.|
T Consensus 66 ---~~G~v~~~eV~G~I~~~~~LsG~P~l~l~Ln~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~FHpcV~l~~f~~~r~I 142 (314)
T 1i31_A 66 ---PQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSI 142 (314)
T ss_dssp ---SSCCEEEEEEEEEEEEEEECSSSCEEEEEESCCC-----------------CCCCCCSEEEECTTSBCC----CCCE
T ss_pred ---CCCCEEEEEEEEEEEEEEEcCCCCeEEEEECCchhccccccccccccccccCCceEcccccccccccHHHcCCcceE
Confidence 999999999999999999999999999999885 24789999999999999999999
Q ss_pred EEeCCCCeEEEEEEEecCCCCCCEEEEEEEEEcCCccEEEEEEEeecCCCC--ceeeEEEEEeCCCCceeeEEEeccccc
Q 014292 263 SFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPGK--TIDSIILQFQLPPCILSADLTSNHGTV 340 (427)
Q Consensus 263 ~F~PPdG~f~L~~Y~~~~~~~~P~~v~~~~~~~~~~~~~ei~l~~~~~~~~--~~~~v~i~ip~p~~~~~~~~~~~~G~~ 340 (427)
+|+||||+|+||+||++.+..+||.+.|+++.. +++++|++++++++++. .+++|.|+||+|+.+.++++++++|++
T Consensus 143 sFiPPDG~F~Lm~Yr~~~~~~lP~~v~~~~~~~-g~~~iE~~l~~~~~~~~~~~~~nV~I~IP~P~~~~~~~~~~~~G~~ 221 (314)
T 1i31_A 143 SFIPPDGEFELMRYRTTKDIILPFRVIPLVREV-GRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKA 221 (314)
T ss_dssp EECCCSEEEEEEEEEECSSCCCCEEEEEEEEEE-TTTEEEEEEEEEECSCTTCEEEEEEEEEECCTTEEEEEEECSSSEE
T ss_pred EEECCCCCeEEEEEEecCCcCCCEEEEEEEEec-CCcEEEEEEEEccCCCCcceeeEEEEEEECCCCcccceEEecCceE
Confidence 999999999999999998888999999999864 45799999999887654 699999999999999999999999999
Q ss_pred eeEeC--cEEEEEeCCcCCCCceEEEEEEEeecCC-CCCCCCCcEEEEEEECceeccccEEeEEEeec-----CCCcccc
Q 014292 341 NVLSN--KICTWSIGRIPKDKAPSLSGTMVLETGL-ETLRVFPTFQVEFRIMGVALSGLQIDKLDLQN-----VPNRLYK 412 (427)
Q Consensus 341 ~~~~~--~~l~W~I~~~~~~~~~~l~g~i~~~~~~-~~~~~~~~i~v~F~~~~~~~SGl~V~~l~v~~-----~~~~~~k 412 (427)
+|++ ++++|+|++++++.+++++|+++|.... ...+.++||+|+|++| +++||++|++|+|.+ .+|+|+|
T Consensus 222 -~y~~~~~~l~W~I~~i~g~~e~~l~~~~~l~s~~~~~~~~~~pi~v~F~ip-~t~Sgl~V~~l~v~e~~~~~~~y~~~k 299 (314)
T 1i31_A 222 -KYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIK 299 (314)
T ss_dssp -EEEGGGTEEEEEEEEEESSEEEEEEEEEEECCCCSSSCCCCCCEEEEEEES-SCTTCCCEEEEEEECSSSSCCGGGCEE
T ss_pred -EEecCCCEEEEEeCcCCCCCcEEEEEEEEecCCCcCCccCCCcEEEEEEEe-ecccCcEEEEEEEeccccccCCCCccC
Confidence 9999 9999999999999999999999997643 3456699999999999 999999999999954 3799999
Q ss_pred ceEEEEecccEEEcC
Q 014292 413 GFRAVTRAGEYEVRS 427 (427)
Q Consensus 413 ~vry~t~sg~y~iR~ 427 (427)
||||+|+||+|++|+
T Consensus 300 wVrYit~sg~y~~R~ 314 (314)
T 1i31_A 300 WVRYIGRSGIYETRC 314 (314)
T ss_dssp EEEEEEEEEEEEECC
T ss_pred ceEEEEeCCeEEEcC
Confidence 999999999999996
No 4
>4en2_M AP-1 complex subunit MU-1; human immunodeficiency virus 1, HIV, NEF, antigen presentation, HOST defense, adaptor protein complex 1, MU1 subunit; 2.58A {Mus musculus} PDB: 4emz_A
Probab=100.00 E-value=1.5e-64 Score=483.62 Aligned_cols=246 Identities=28% Similarity=0.551 Sum_probs=224.0
Q ss_pred cccCCCCCcccceEEEEEEEeEeEEEecccccccccccCCCCcEEEEEEEEEEEEEEeecCCCeEEEEecCCC-------
Q 014292 168 PWRPTDVKYANNEVYVDLVEEMDAIINSTKQFSLLHARFRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANPS------- 240 (427)
Q Consensus 168 ~WR~~~~~~~~nei~vdv~E~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~G~i~~~s~LsG~P~~~l~ln~~~------- 240 (427)
+||+.|++|++|||||||+|+|+++++ ++|.+++++|.|+|.|+|+|+|+|+|+|+||++.
T Consensus 1 ~WR~~~i~y~~nei~vdV~E~v~~~~~------------~~G~v~~~~v~G~i~~~~~lsG~p~~~l~ln~~~~~~~~~~ 68 (266)
T 4en2_M 1 SWRSEGIKYRKNEVFLDVIEAVNLLVS------------ANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGR 68 (266)
T ss_dssp CCCCTTCCCSSEEEEEEEEEEEEEEEC------------TTSCEEEEEEEEEEEEEEECCSCCEEEEEECBHHHHHHTTC
T ss_pred CCcCCCCccccCeEEEEEEEEEEEEEC------------CCCCEEEEEEEEEEEEEEECCCCCEEEEEEcCccccccccc
Confidence 699999999999999999999999999 9999999999999999999999999999998753
Q ss_pred ------ccccceecceeecCCcCCCceEEEeCCCCeEEEEEEEecCCCCCCEEEEEEEEEcCCccEEEEEEEeecCCC--
Q 014292 241 ------ILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPG-- 312 (427)
Q Consensus 241 ------~l~~~~fH~cV~~~~~~~~~~l~F~PPdG~f~L~~Y~~~~~~~~P~~v~~~~~~~~~~~~~ei~l~~~~~~~-- 312 (427)
.++||+|||||++++|++++.|+|+||||+|+||+||++....+||.++|+++.. +++++++.++++++++
T Consensus 69 ~~~~~~~l~d~~fH~cV~~~~f~~~r~i~f~PPdg~F~Lm~yr~~~~~~~Pi~i~~~~~~~-~~~~vei~v~~k~~~~~~ 147 (266)
T 4en2_M 69 GKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKH-SHSRIEYMVKAKSQFKRR 147 (266)
T ss_dssp TTSCCBCCEEEEECTTBCHHHHHHHCCCEECCCSEEEEEEEEEECCCCCCSEEEEEEEEEE-ETTEEEEEEEEEECBCTT
T ss_pred cccCccCccccccccccCHhHccccceEEEeCCCCceEEEEEEecCCCCCCEEEEEEEecC-CCEEEEEEEEEecCCCCC
Confidence 3889999999999999999999999999999999999998888999999999854 3579999999988764
Q ss_pred CceeeEEEEEeCCCCceeeEEEeccccceeEeC--cEEEEEeCCcCCCCceEEEEEEEeecC-CCCCCCCCcEEEEEEEC
Q 014292 313 KTIDSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTWSIGRIPKDKAPSLSGTMVLETG-LETLRVFPTFQVEFRIM 389 (427)
Q Consensus 313 ~~~~~v~i~ip~p~~~~~~~~~~~~G~~~~~~~--~~l~W~I~~~~~~~~~~l~g~i~~~~~-~~~~~~~~~i~v~F~~~ 389 (427)
..+++|.|+||+|..+.+++++++.|++ +|++ ++++|+|++++++.+++++|++.+.+. ....+.++||+|+|++|
T Consensus 148 ~~~~nV~I~IP~P~~~~~~~~~~~~G~~-~y~~~~~~lvW~I~~~~g~~e~~l~~~~~l~s~~~~~~~~~~pI~v~F~ip 226 (266)
T 4en2_M 148 STANNVEIHIPVPNDADSPKFKTTVGSV-KWVPENSEIVWSVKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIP 226 (266)
T ss_dssp CEEEEEEEEEECCTTCEEEEEEESSSEE-EEETTTTEEEEEEEEEESSCEEEEEEEEEC----------CCCEEEEEEEE
T ss_pred cEEEEEEEEECCCCCcCcceEEecCceE-EEeccCCEEEEEEeeECCCcceEEEEEEEeCCCCCCCcccCCcEEEEEEeC
Confidence 3899999999999999999999999999 9999 999999999999999999999999653 23456799999999999
Q ss_pred ceeccccEEeEEEeec-CCCccccceEEEEecccEEEcC
Q 014292 390 GVALSGLQIDKLDLQN-VPNRLYKGFRAVTRAGEYEVRS 427 (427)
Q Consensus 390 ~~~~SGl~V~~l~v~~-~~~~~~k~vry~t~sg~y~iR~ 427 (427)
++++|||+|++|+|.+ .+|+++|||||+|+||+|++|+
T Consensus 227 ~~t~SGl~V~~L~v~e~~~y~~~kwVrY~T~sg~y~~R~ 265 (266)
T 4en2_M 227 YFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRT 265 (266)
T ss_dssp SEESSCCCEEEEEEECSSCCCEEEEEEEEEECSSEEECC
T ss_pred CceeCCcEEEEEEeeccCCCCCCCCEEEEEeCCCEEEec
Confidence 9999999999999954 5899999999999999999996
No 5
>3ml6_A Chimeric complex between protein dishevlled2 HOMO and clathrin adaptor AP-2 complex...; dishevelled, frizzled internalization; 3.50A {Mus musculus}
Probab=100.00 E-value=3.9e-62 Score=488.95 Aligned_cols=250 Identities=24% Similarity=0.441 Sum_probs=228.5
Q ss_pred CCcCC-cc---cCCCCCcccceEEEEEEEeEeEEEecccccccccccCCCCcEEEEEEEEEEEEEEeecCCCeEEEEecC
Q 014292 163 TASCV-PW---RPTDVKYANNEVYVDLVEEMDAIINSTKQFSLLHARFRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFAN 238 (427)
Q Consensus 163 ~~~~~-~W---R~~~~~~~~nei~vdv~E~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~G~i~~~s~LsG~P~~~l~ln~ 238 (427)
.++++ || |+.|++|++|||||||+|+|+++++ ++|.+++++|.|+|.|+|+|+|||+|+|+||+
T Consensus 101 ~s~~~~~~~~~~~~gi~y~knEi~vdV~E~v~~~~~------------~~G~v~~~eV~G~I~~k~~LsG~P~~~l~LNd 168 (385)
T 3ml6_A 101 YSPQPPPYHELEFGGSGGSRNELFLDVLESVNLLMS------------PQGQVLSAHVSGRVVMKSYLSGMPECKFGMND 168 (385)
T ss_dssp --CCCCCCEEBCSSSBCCCCCEEEEEEEEEEEEEEC------------TTSCEEEEEEEEEEEEEEECSSCCEEEEEECC
T ss_pred cCCCCCCchhccccCCccccceEEEEEEEEEEEEEC------------CCCCEEEEEEEEEEEEEEeCCCCCeEEEEEcC
Confidence 34444 99 8899999999999999999999999 99999999999999999999999999999987
Q ss_pred C---------------------CccccceecceeecCCcCCCceEEEeCCCCeEEEEEEEecCCCCCCEEEEEEEEEcCC
Q 014292 239 P---------------------SILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAG 297 (427)
Q Consensus 239 ~---------------------~~l~~~~fH~cV~~~~~~~~~~l~F~PPdG~f~L~~Y~~~~~~~~P~~v~~~~~~~~~ 297 (427)
. ..|+||+|||||++++|+++|.|+|+||||+|+||+||++.+..+||.+.|+++.. +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~i~l~d~~FH~CV~l~~f~~~r~IsFiPPDg~F~Lm~Yr~~~~~~~Pf~i~~~v~~~-~ 247 (385)
T 3ml6_A 169 KIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREV-G 247 (385)
T ss_dssp ----------------------CCCCEEEECTTBCCCCSSSCSEEEECCCSEEEEEEEEEECSSCCCSEEEEEEEEEE-T
T ss_pred ccccccccccccccccccccCceEccccccccccChhHccccceEEEeCCCCceEEEEEEcCCCCCCCEEEEEEEEeC-C
Confidence 5 24789999999999999999999999999999999999988888999999999965 4
Q ss_pred ccEEEEEEEeecCCCC--ceeeEEEEEeCCCCceeeEEEeccccceeEeC--cEEEEEeCCcCCCCceEEEEEEEeecCC
Q 014292 298 TCRISVMVGIRNDPGK--TIDSIILQFQLPPCILSADLTSNHGTVNVLSN--KICTWSIGRIPKDKAPSLSGTMVLETGL 373 (427)
Q Consensus 298 ~~~~ei~l~~~~~~~~--~~~~v~i~ip~p~~~~~~~~~~~~G~~~~~~~--~~l~W~I~~~~~~~~~~l~g~i~~~~~~ 373 (427)
++++++++++++++++ .+++|.|+||+|+.+.+++++++.|++ +|++ ++++|+|++++|+.+++++|++.+.+..
T Consensus 248 ~~~vei~v~lk~~f~~~~~~~nV~I~IP~P~~~~~~~~~~~~G~~-~y~~~~~~lvW~I~k~~g~~e~~l~~~~~l~~~~ 326 (385)
T 3ml6_A 248 RTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKA-KYKASENAIVWKIKRMAGMKESQISAEIELLPTN 326 (385)
T ss_dssp TTEEEEEEEEEECSCTTCCEEEEEEEEECCTTEEEEEEEESSSEE-EEEGGGTEEEEEEEEECSSEEEEEEEEEEECCCS
T ss_pred CeEEEEEEEEeecCCCcceEEEEEEEecCCCCcccceEEecCceE-EEeccCcEEEEEeeeECCCcceEEEEEEEECCCC
Confidence 6899999999987654 799999999999999999999999999 9998 9999999999999999999999996532
Q ss_pred -CCCCCCCcEEEEEEECceeccccEEeEEEee-c----CCCccccceEEEEecccEEEcC
Q 014292 374 -ETLRVFPTFQVEFRIMGVALSGLQIDKLDLQ-N----VPNRLYKGFRAVTRAGEYEVRS 427 (427)
Q Consensus 374 -~~~~~~~~i~v~F~~~~~~~SGl~V~~l~v~-~----~~~~~~k~vry~t~sg~y~iR~ 427 (427)
...+.++||+|+|++| +++|||+|++|+|. + .+|+++|||||+|+||+|++|+
T Consensus 327 ~~~~~~~~PI~v~F~Ip-~t~SGl~Vr~L~v~e~~~~~~~y~~~kwVRYiT~sg~Y~~R~ 385 (385)
T 3ml6_A 327 DKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 385 (385)
T ss_dssp SCCSCCCCCEEEEEEES-SCTTCCCEEEEEEECSSSCCCGGGCEEEEEECEEEEEEEECC
T ss_pred CCccccCCCEEEEEEEe-ccccCCEEEEEEEecccCcccCCCccccEEEEEECCCEEecC
Confidence 3446799999999999 99999999999994 3 4689999999999999999996
No 6
>3l81_A AP-4 complex subunit MU-1; immunoglobulin-like beta-sandwich, coated PIT, golgi apparat membrane, phosphoprotein, protein transport, transport; 1.60A {Homo sapiens}
Probab=100.00 E-value=6.5e-62 Score=472.65 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=208.9
Q ss_pred CCCcCC-cccCCCCCcccceEEEEEEEeEeEEEecccccccccccCCCCcEEEEEEEEEEEEEEeecCCCeEEEEecCC-
Q 014292 162 ATASCV-PWRPTDVKYANNEVYVDLVEEMDAIINSTKQFSLLHARFRDGVLVKCEIYGEVQVNCLLSGLPDLTLSFANP- 239 (427)
Q Consensus 162 ~~~~~~-~WR~~~~~~~~nei~vdv~E~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~G~i~~~s~LsG~P~~~l~ln~~- 239 (427)
+++.++ |||+. +|++|||||||+|+|+++++ ++|.+++++|.|.|.|+|+|+|||+|+|+||++
T Consensus 17 a~~~pv~~wr~~--~~~knEi~vdV~E~v~~~~~------------~~G~v~~~eV~G~I~~~~~LsG~P~~~l~Lnd~~ 82 (301)
T 3l81_A 17 AASRPVLSSRSD--QSQKNEVFLDVVERLSVLIA------------SNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEF 82 (301)
T ss_dssp ------------------CEEEEEEEEEEEEEEC------------TTSCEEEEEEEEEEEEEECCCTTCEEEEEECSSC
T ss_pred hhcCcccccccc--cCCcceEEEEEEEEEEEEEC------------CCCCEEEEEEEEEEEEEEeCCCCCeEEEEEcccc
Confidence 344444 99996 79999999999999999999 999999999999999999999999999999965
Q ss_pred -------------CccccceecceeecCCcCCCceEEEeCCCCeEEEEEEEecCCC--CCCEEEEEEEEEcCCccEEEEE
Q 014292 240 -------------SILHDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVKKLK--STPIYVKPQLTSDAGTCRISVM 304 (427)
Q Consensus 240 -------------~~l~~~~fH~cV~~~~~~~~~~l~F~PPdG~f~L~~Y~~~~~~--~~P~~v~~~~~~~~~~~~~ei~ 304 (427)
..++||+|||||++++|+++|.|+|+||||+|+||+||++... .+||.++|+++...++.++|++
T Consensus 83 ~~~~~~~~~~~~~~~l~d~~fH~cV~~~~f~~~r~IsFiPPDg~F~Lm~Yr~~~~~~~~~P~~v~~~v~~~~~~~~ie~~ 162 (301)
T 3l81_A 83 SVGKSELRGYGPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDLPSPLPFRLFPSVQWDRGSGRLQVY 162 (301)
T ss_dssp EESCCTTTCCCSSSEESEEEEETTCBCTTHHHHCEEEECCCSEEEEEEEEEECSCCSSCCSEEEEEEEEECTTTSEEEEE
T ss_pred cccccccccccCceEccccccccccChhHccccceEEecCCCCeeEEEEEEecCCCccCCCEEEEEEEEECCCcEEEEEE
Confidence 2379999999999999999999999999999999999998754 6899999999986555899999
Q ss_pred EEeecCCC--CceeeEEEEEeCCCCceeeE--EEeccccceeEeCcEEEEEeCCcCCCCceEEEEEEEeecCCC------
Q 014292 305 VGIRNDPG--KTIDSIILQFQLPPCILSAD--LTSNHGTVNVLSNKICTWSIGRIPKDKAPSLSGTMVLETGLE------ 374 (427)
Q Consensus 305 l~~~~~~~--~~~~~v~i~ip~p~~~~~~~--~~~~~G~~~~~~~~~l~W~I~~~~~~~~~~l~g~i~~~~~~~------ 374 (427)
+++++.++ ..+++|.|+||+|+.+.+++ +.++.|++ +|+.++++|+|++++++.+.++++++++.....
T Consensus 163 l~l~~~f~~~~~~~nV~I~IPvP~~~~~~~~~~~~~~G~~-~y~~~~lvW~I~~~~g~~~~s~~~~~~l~~~~~~~~~~~ 241 (301)
T 3l81_A 163 LKLRCDLLSKSQALNVRLHLPLPRGVVSLSQELSSPEQKA-ELAEGALRWDLPRVQGGSQLSGLFQMDVPGPPGPPSHGL 241 (301)
T ss_dssp EEEEECSCTTCEEEEEEEEEECCTTCEEEEEEESSTTCEE-EEETTEEEEEECCEETTCEEEEEEEEECCCCCC------
T ss_pred EEEecCCCCCcEEEEEEEEEcCCCCcccceEEEeecCceE-EEeCcEEEEEEeeECCCcEEeEEEEEEecCCcccccccc
Confidence 99988764 38999999999999998888 55789999 993399999999999998888888887754221
Q ss_pred ----CCCCCCcEEEEEEECceeccccEEeEEEeecC---CCccccceEEEEecccEEEcC
Q 014292 375 ----TLRVFPTFQVEFRIMGVALSGLQIDKLDLQNV---PNRLYKGFRAVTRAGEYEVRS 427 (427)
Q Consensus 375 ----~~~~~~~i~v~F~~~~~~~SGl~V~~l~v~~~---~~~~~k~vry~t~sg~y~iR~ 427 (427)
..+.++||+|+|++|++++||++|++|+|.+. +|+++|||||+|+||+|++|+
T Consensus 242 ~~~~~~~~~~PI~v~F~ip~~t~SGl~Vr~L~v~e~~~~~y~~~kwVRYiT~sg~Y~~R~ 301 (301)
T 3l81_A 242 STSASPLGLGPASLSFELPRHTCSGLQVRFLRLAFRPSGNANPHKWVRHLSHSDAYVIRI 301 (301)
T ss_dssp ------CCCCCEEEEEEEETCCSSCCCEEEEEEEC-------CEEEEEEEEEEEEEEECC
T ss_pred ccccccccCCCEEEEEEeCCccccCcEEEEEEEecccccCCCCccceEEEEeCCcEEEcC
Confidence 14668999999999999999999999999543 589999999999999999996
No 7
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=99.97 E-value=6.3e-31 Score=232.20 Aligned_cols=140 Identities=19% Similarity=0.275 Sum_probs=127.5
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCc---chHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCCh
Q 014292 1 MLQCIFLLADNGAVILEKQLTGHRVDR---SICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPP 77 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~~~~~---~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~n~ 77 (427)
||+++||+|++|+++++|+|++ ..++ ...+.|++.+.++. ++.+|+++.++++++|+++++|||+++++.++|+
T Consensus 1 MI~~i~Il~~~Gk~~lsk~y~~-~~~~~~~~~~~~~~~~i~~~~--~~~~~~i~~~~~~~vy~~~~~Lyfv~~~~~~~Ne 77 (158)
T 1w63_Q 1 MMRFMLLFSRQGKLRLQKWYLA-TSDKERKKMVRELMQVVLARK--PKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNE 77 (158)
T ss_dssp CEEEEEEECSSSCEEEEEESSC-CCHHHHHHHHHHHHHHHHTSC--SSSCSEEEETTEEEEEEEETTEEEEEEECSSSCH
T ss_pred CeEEEEEECCCCCEEEEEeCCC-CCHHHHHHHHHHHHHHHhccC--CCCCCeEEECCEEEEEEEECCEEEEEEecCCCCH
Confidence 9999999999999999999998 5543 34567877776543 3578999999989999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhccCCCHHHHHhhHHHHHHHHHHHHhCCcccccChhhHhhccCCCccccc
Q 014292 78 LMGIEFLCRVADILSDYLGELNEDLIKDNFVIVYELLDEMIDNGFPLTTEPNILREMIAPPNIVSK 143 (427)
Q Consensus 78 l~~~~~L~~~~~~l~~y~~~l~e~~i~~N~~~v~~lldEiid~G~p~~t~~~~l~~~i~~~~~~~k 143 (427)
+++++|||+++++|++|||+++|++|++||+.+|++||||+|+|+|++|+++.|+++|.+++.+.+
T Consensus 78 l~~le~L~~~vevl~~yf~~v~E~~I~~Nf~~vy~lLDE~id~G~~~eT~~~~l~~~I~~~~~l~~ 143 (158)
T 1w63_Q 78 LITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQADLLQE 143 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHTTEETTEESCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCCHHHHHHhHHHHHHHHHHHHhCCEEEecCHHHHHHHHhcchhhhh
Confidence 999999999999999999999999999999999999999999999999999999999998876554
No 8
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=99.96 E-value=6.7e-30 Score=221.96 Aligned_cols=136 Identities=21% Similarity=0.269 Sum_probs=121.7
Q ss_pred CeEEEEEEcCCCCEEEEEccCCC--CCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChh
Q 014292 1 MLQCIFLLADNGAVILEKQLTGH--RVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPL 78 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~--~~~~~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~n~l 78 (427)
||++++|+|++|+++++|+|+++ +..++..+.|.+++..+. ++.+|+++.++..++|+++++|||+++++.++|++
T Consensus 1 MI~~i~i~~~~Gk~~l~k~y~~~~~~~~~~~~~~f~~~v~~~~--~~~~~~~~~~~~~~vy~~~~~Lyfv~~~~~~~N~l 78 (142)
T 2vgl_S 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRD--AKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNL 78 (142)
T ss_dssp CEEEEEEEETTSCEEEEEECSCCCHHHHHHHHHHHHHHHHTCC--TTSCSEEEETTEEEEEEEETTEEEEEEECTTSCHH
T ss_pred CeEEEEEEcCCCCEEEEEeCCCCChhhhHHHHHHHHHHHhcCC--CCCCCEEEECCEEEEEEEECCEEEEEEeCCCCCHH
Confidence 99999999999999999999952 223556778998888542 35789999999889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCHHHHHhhHHHHHHHHHHHHhCCcccccC-hhhHhhccCCC
Q 014292 79 MGIEFLCRVADILSDYLGELNEDLIKDNFVIVYELLDEMIDNGFPLTTE-PNILREMIAPP 138 (427)
Q Consensus 79 ~~~~~L~~~~~~l~~y~~~l~e~~i~~N~~~v~~lldEiid~G~p~~t~-~~~l~~~i~~~ 138 (427)
+++++||+++++|++|||+++|++|++||+.+|++||||+|+|+|++|+ .+.|+.++.++
T Consensus 79 ~~le~L~~~ve~l~~yf~~v~E~~I~~Nf~~vy~lLDE~id~G~~~et~~~~il~~~~~~~ 139 (142)
T 2vgl_S 79 AYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQ 139 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCHHHHHHTHHHHHHHHHHHEETTEECCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999985 67788877544
No 9
>3tjz_C Coatomer subunit zeta-1; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} PDB: 2hf6_A
Probab=99.96 E-value=1.4e-28 Score=215.38 Aligned_cols=133 Identities=15% Similarity=0.224 Sum_probs=115.9
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCC----cchHH-HHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCC
Q 014292 1 MLQCIFLLADNGAVILEKQLTGHRVD----RSICD-WFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEM 75 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~~~~----~~~~~-~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~ 75 (427)
||++++|+|++|+++++|||++ +.+ +..++ .+++++. + . .+|++..+++.++|+++++|||+++++.++
T Consensus 12 mI~~ililn~~Gk~~lsK~Y~~-~~~~~~~~~~~e~~i~~~~~-r---~-~~~i~~~~~~~~vy~~~~~Lyfv~~~~~~e 85 (153)
T 3tjz_C 12 TVKAILILDNDGDRLFAKYYDD-TYPSVKEQKAFEKNIFNKTH-R---T-DSEIALLEGLTVVYKSSIDLYFYVIGSSYE 85 (153)
T ss_dssp CEEEEEEECTTSCEEEEEECSS-SSCSHHHHHHHHHHHHHHHS-S---C-CCCEEEETTEEEEEEECSSCEEEEEEETTS
T ss_pred HheEEEEECCCCCEEEEEeCCC-CCCCHHHHHHHHHHHHHHHh-C---C-CCCEEEECCEEEEEEEECCEEEEEEEcCCC
Confidence 9999999999999999999998 643 23344 3555542 2 2 268999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHhhhc-cCCCHHHHHhhHHHHHHHHHHHHhCCcccccChhhHhhccCCCc
Q 014292 76 PPLMGIEFLCRVADILSDYL-GELNEDLIKDNFVIVYELLDEMIDNGFPLTTEPNILREMIAPPN 139 (427)
Q Consensus 76 n~l~~~~~L~~~~~~l~~y~-~~l~e~~i~~N~~~v~~lldEiid~G~p~~t~~~~l~~~i~~~~ 139 (427)
|+++++++||+++++|+.|| |+++|.+|++||+.+|++||||+|+|+||+||++.|.+.+.+++
T Consensus 86 Nel~ile~L~~~ve~l~~yf~~~v~E~~I~~Nf~~vy~lLDE~id~G~~~eT~~~~I~~~v~~~~ 150 (153)
T 3tjz_C 86 NELMLMTVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRG 150 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHTHHHHHHHHHHHEETTEECCCCHHHHHHTC----
T ss_pred ChHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHcCCEeeeCCHHHHHHHHhccc
Confidence 99999999999999999999 88999999999999999999999999999999999999998764
No 10
>3g9h_A Suppressor of yeast profilin deletion; SYP1, MU, adaptor, endocytosis, phosphoprotein; HET: 1PG; 2.80A {Saccharomyces cerevisiae}
Probab=99.05 E-value=3.5e-07 Score=87.87 Aligned_cols=202 Identities=18% Similarity=0.288 Sum_probs=136.2
Q ss_pred cceEEEEEEEeEeEEEecccccccccccCCCCcEEEEEEEEEEEEEEeecC-------CCeEEEEecCCCccccce----
Q 014292 178 NNEVYVDLVEEMDAIINSTKQFSLLHARFRDGVLVKCEIYGEVQVNCLLSG-------LPDLTLSFANPSILHDVR---- 246 (427)
Q Consensus 178 ~nei~vdv~E~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~G~i~~~s~LsG-------~P~~~l~ln~~~~l~~~~---- 246 (427)
.-++-..++|.|||.+. +|.+.++.|.|+|.+.- ..| -+.+.+.|++...|+.+.
T Consensus 67 ~pGLnASI~E~VNA~Fk-------------gg~~tk~~v~GEiaLsy-~~~~~s~~p~p~~l~fRL~N~~~Lekv~pN~~ 132 (328)
T 3g9h_A 67 QFGLNASIAEVLNASFK-------------DGMLQNSQLIGEIALNY-LPNSVMNSPLPIGINLRINNGAKFEKVILNQA 132 (328)
T ss_dssp CCEEEEEEEEEEEEEEE-------------TTEEEEEEEEEEEEEEE-ECCSSSCCCCCSEEEEEEETGGGEEEEEECTT
T ss_pred CCceeEEEEEEEEEEEE-------------CCcEEEEEEEEEEEEec-CCCccccCCCCccEEEEecCcchhheeeCCHH
Confidence 45788899999999996 99999999999988874 333 245888888766566543
Q ss_pred ecceeecCCcCCCceEEEeCC---CCeEEEEEEEecCCCCCCEEEEEEEEEcCCccEEEEEEEeecCCCC-----ceeeE
Q 014292 247 FHPCVRFRPWESHQILSFVPP---DGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRISVMVGIRNDPGK-----TIDSI 318 (427)
Q Consensus 247 fH~cV~~~~~~~~~~l~F~PP---dG~f~L~~Y~~~~~~~~P~~v~~~~~~~~~~~~~ei~l~~~~~~~~-----~~~~v 318 (427)
|-.++.. ....|-++ ...-.+++|+++. ...|+.+.+.-+.+.....+-|.+++...+.. .++||
T Consensus 133 fv~~~~~------~eF~vn~~~L~sktv~~lKYqVs~-~~~PL~l~p~WK~E~~qtsliI~Yk~NP~~~~~~~~~~L~Nv 205 (328)
T 3g9h_A 133 FIERVAP------EEFKVNPSFIDSRTLGAIKYSIKE-PIAPIVIHPVWRFESHQASVVLTVKMSPSLPDEISQIVIEDL 205 (328)
T ss_dssp TEEEEET------TEEEECTTTTBTCEEEEEEEEEES-CCCSEEEEEEEEECSSEEEEEEEEEECTTSCTTCCEEEEEEE
T ss_pred HhccCCC------CCEEEchHHhcccceeeEEEEECC-CCCCeEEEeeeecCCCeeEEEEEEEECCCCcCcCCCceeeeE
Confidence 3333331 22333332 1235679999975 77899999887877543333333333333222 79999
Q ss_pred EEEEeCCC-CceeeEEEeccccceeEeCcEEEEEeCC-c--C-CCCceEEEEEEEeecCCCCCCCCCcEEEEEEECce--
Q 014292 319 ILQFQLPP-CILSADLTSNHGTVNVLSNKICTWSIGR-I--P-KDKAPSLSGTMVLETGLETLRVFPTFQVEFRIMGV-- 391 (427)
Q Consensus 319 ~i~ip~p~-~~~~~~~~~~~G~~~~~~~~~l~W~I~~-~--~-~~~~~~l~g~i~~~~~~~~~~~~~~i~v~F~~~~~-- 391 (427)
.+.+|+.. .+.+++..+ .|++ .=+.+.+.|+|+. + . ++....|.|.+..+. ...+. ...+.+.|++.+.
T Consensus 206 ~~~V~ldGa~ats~qskP-~gtw-n~e~~ri~Wkl~e~l~l~~~g~~gkLiARf~~~g-~~~~~-~~gV~akF~~~~~~~ 281 (328)
T 3g9h_A 206 VVFVNIDGANATSALSKP-QGSF-SKEKKRITWRFKEPVVLTRNGEGQRLIARFITDG-LAHES-AKGVITKFTISETDN 281 (328)
T ss_dssp EEEEEBCSSCEEEEEESS-SCCB-CSSSCEEEEECSSCEEEETTCCCEEEEEEEEESS-CCCBC-SSCEEEEEEECCCSC
T ss_pred EEEEEeCCCceeEEEecC-Ccee-ccccCEEEEECCCCcccccCCCCCeEEEEEEcCC-CCCCC-CCcEEEEEEEeCCCc
Confidence 99999987 455554443 6777 4344999999998 3 2 222378999998833 22221 2239999999976
Q ss_pred -------eccccEEeEEEee
Q 014292 392 -------ALSGLQIDKLDLQ 404 (427)
Q Consensus 392 -------~~SGl~V~~l~v~ 404 (427)
.-|||.|...+..
T Consensus 282 ~~~~~~~~gsgi~i~~~~~~ 301 (328)
T 3g9h_A 282 VALPHSGAGSGITLTCQELD 301 (328)
T ss_dssp SSCTTTTCSCCCEEEEEEES
T ss_pred ccccccccCCceeEEecccc
Confidence 4679999888773
No 11
>4b93_A Vesicle-associated membrane protein 7; endocytosis, exocytosis, snare; 2.00A {Mus musculus} PDB: 2dmw_A
Probab=92.24 E-value=1 Score=39.85 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=57.7
Q ss_pred CCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChhHHHHHHHHHHH
Q 014292 10 DNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPLMGIEFLCRVAD 89 (427)
Q Consensus 10 ~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~n~l~~~~~L~~~~~ 89 (427)
.+|.++++.+-.. +. -...+-++++..-.....--.+..+.+.++|...+++.|+|+++.+-+--.++.||..+.+
T Consensus 10 Arg~~iLae~t~~---~g-nf~~ia~~iL~kip~~~~k~s~~~~~y~fHyl~~~gl~yl~i~d~~yp~r~af~fL~~i~~ 85 (189)
T 4b93_A 10 ARGTTILAKHAWC---GG-NFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKK 85 (189)
T ss_dssp EETTEEEEEEESS---EE-CHHHHHHHHHTTCCSSSEEEEEEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHHHHHH
T ss_pred EeCCEEEEeCCCC---CC-CHHHHHHHHHHhCCCCCCeEEEEECCEEEEEEEeCCeEEEEEEcCccCHHHHHHHHHHHHH
Confidence 3688888875222 22 2333444444432111111245568888889999999999999999999999999999998
Q ss_pred HHhhhccC
Q 014292 90 ILSDYLGE 97 (427)
Q Consensus 90 ~l~~y~~~ 97 (427)
-+..-++.
T Consensus 86 eF~~~~~~ 93 (189)
T 4b93_A 86 RFQTTYGS 93 (189)
T ss_dssp HHHHHHGG
T ss_pred HHHhhccc
Confidence 88777664
No 12
>2nut_C Vesicle-trafficking protein SEC22B; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_C 3egd_C 3egx_C 1ifq_A
Probab=91.88 E-value=1.8 Score=38.25 Aligned_cols=96 Identities=9% Similarity=0.172 Sum_probs=60.5
Q ss_pred CeEEEEEEcC-CCCEEEEEccCCCCC---CcchHHHHHHHHhccCCC-CCCCCEEEcCCEEEEEEEeCCEEEEEEecCCC
Q 014292 1 MLQCIFLLAD-NGAVILEKQLTGHRV---DRSICDWFWDHVISQGDS-FKSMPVIASPTHYIFQIVRAGITFLACTQVEM 75 (427)
Q Consensus 1 MI~~i~Ild~-~G~~l~~r~y~~~~~---~~~~~~~f~~~~~~~~~~-~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~ 75 (427)
||...+|.-. +|-+|.+. +..... .+.....+.+.+...-.. ...---+..+.+.++|...+++.|+|+++.+-
T Consensus 2 Mi~ya~IaR~~d~~iLa~~-~d~~~~~~~~~~~~~~~a~~il~ki~~~~~~r~s~~~~~y~fhy~~~~gl~~l~i~d~~y 80 (196)
T 2nut_C 2 MVLLTMIARVADGLPLAAS-MQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAF 80 (196)
T ss_dssp CCCCEEEEETTTCCEEEEE-CCCC-----CHHHHHHHHHHHHHHCCTTSCSEEEEEETTEEEEEEEETTEEEEEEEETTS
T ss_pred ceEEEEEEEcCCCcEEEEe-ecccccccccHHHHHHHHHHHHHhcCCCCCCeEEEEeCCEEEEEEeCCCeEEEEEEcCCc
Confidence 6666666643 46666554 332011 122344444555543211 11112345577778888889999999999999
Q ss_pred ChhHHHHHHHHHHHHHhhhccC
Q 014292 76 PPLMGIEFLCRVADILSDYLGE 97 (427)
Q Consensus 76 n~l~~~~~L~~~~~~l~~y~~~ 97 (427)
+.-.++.||..+.+-+..-++.
T Consensus 81 p~r~af~fL~~i~~~F~~~~~~ 102 (196)
T 2nut_C 81 PKKLAFAYLEDLHSEFDEQHGK 102 (196)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999887776653
No 13
>2vx8_A Nucleoporin-like protein RIP, vesicle-associated membrane protein 7; endocytosis,exocytosis, endocytosis, exocytosis, acetylation, coiled coil; 2.2A {Homo sapiens} PDB: 2dmw_A
Probab=91.67 E-value=1.6 Score=37.93 Aligned_cols=87 Identities=16% Similarity=0.146 Sum_probs=57.0
Q ss_pred EEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChhHHHHHHH
Q 014292 6 FLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPLMGIEFLC 85 (427)
Q Consensus 6 ~Ild~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~n~l~~~~~L~ 85 (427)
.++. +|.++++.+-.. . ......-+.++.+-.....---++.+.+.+.|...++|.|+|+++.+-+--+.+.||+
T Consensus 49 a~Va-RG~~VLae~t~~---~-gnf~~iak~ll~kl~~~~~r~s~~~~~y~fHyl~~ngl~yl~I~D~~yp~r~AF~fLe 123 (169)
T 2vx8_A 49 AVVA-RGTTILAKHAWC---G-GNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLN 123 (169)
T ss_dssp EEEE-ETTEEEEEEESS---C-BSHHHHHHHHHTTSCSSCEEEEEEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHH
T ss_pred EEEE-cCCEEEEEeccC---C-CCHHHHHHHHHhhCCCCCCceEEEECCEEEEEEEECCEEEEEEEccccchHHHHHHHH
Confidence 3344 456666654222 1 1234444455543221111124556788888888899999999999999999999999
Q ss_pred HHHHHHhhhccC
Q 014292 86 RVADILSDYLGE 97 (427)
Q Consensus 86 ~~~~~l~~y~~~ 97 (427)
.+.+-+..-++.
T Consensus 124 dI~~eF~~~y~~ 135 (169)
T 2vx8_A 124 EVKKRFQTTYGS 135 (169)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhhh
Confidence 999988877664
No 14
>4afi_A AP-3 complex subunit delta-1, vesicle-associated protein 7; endocytosis, exocytosis, clathrin adaptor, chimera, fusion P; 2.80A {Homo sapiens}
Probab=90.60 E-value=2.6 Score=36.61 Aligned_cols=83 Identities=16% Similarity=0.133 Sum_probs=58.2
Q ss_pred CCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCCEEEEEEecCCCChhHHHHHHHHHHHH
Q 014292 11 NGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAGITFLACTQVEMPPLMGIEFLCRVADI 90 (427)
Q Consensus 11 ~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~L~fv~~~~~~~n~l~~~~~L~~~~~~ 90 (427)
+|.++++.+-.. . .-.+.+-+.++.+-.....--.++.+.+.++|...+++.|+|+++.+-+--+.+.||..+.+-
T Consensus 63 rg~tiLAE~t~~-~---gnf~~va~~iL~kip~~~~r~t~~~~~y~fHyl~~dgl~yl~i~D~~~~rr~aF~FLedI~~e 138 (173)
T 4afi_A 63 RGTTILAKHAWC-G---GNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKR 138 (173)
T ss_dssp ETTEEEEEEESS-C---CCHHHHHHHHHTTSCSSSEEEEEEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEccCC-C---CCHHHHHHHHHHhCCCCCCeEEEEECCEEEEEEEECCEEEEEEECCccChhHHHHHHHHHHHH
Confidence 577888875332 2 223445555554322111112445688888889999999999999999999999999999998
Q ss_pred HhhhccC
Q 014292 91 LSDYLGE 97 (427)
Q Consensus 91 l~~y~~~ 97 (427)
+..-+|.
T Consensus 139 F~~~yg~ 145 (173)
T 4afi_A 139 FQTTYGS 145 (173)
T ss_dssp HHHHHGG
T ss_pred HHHHhch
Confidence 8877764
No 15
>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A
Probab=86.81 E-value=6.6 Score=32.81 Aligned_cols=90 Identities=11% Similarity=0.073 Sum_probs=60.1
Q ss_pred eEEEEEEcCCCCEEEEEccCCCCCCc-----chHHHHHHHHhccC--CCCCCCCEEE-cCCEEEEEEEeCCEEEEEEecC
Q 014292 2 LQCIFLLADNGAVILEKQLTGHRVDR-----SICDWFWDHVISQG--DSFKSMPVIA-SPTHYIFQIVRAGITFLACTQV 73 (427)
Q Consensus 2 I~~i~Ild~~G~~l~~r~y~~~~~~~-----~~~~~f~~~~~~~~--~~~~~~pii~-~~~~~~~~~~~~~L~fv~~~~~ 73 (427)
+.+|+|.|++|-+|+.-.... .+. +.+..|-...-+.. .-+++..++. .+.+.+++.....+++..++..
T Consensus 38 l~aI~ItDrDGVpi~kv~~~~--~~e~~~r~s~lsTf~~A~dQ~sKLglGknksII~~Y~~yqvVq~n~~Plvit~Ias~ 115 (143)
T 3cpt_A 38 LHAIVVSDRDGVPVIKVANDN--APEHALRPGFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASS 115 (143)
T ss_dssp EEEEEEECTTSCEEEEEECTT--SCGGGGSHHHHHHHHHHHHHHHHHTCCCEEEEEEECSSEEEEEEEETTEEEEEEEET
T ss_pred eEEEEEECCCCcEEEEecCCC--CchhhcccchhhhHHHHHHHHhhcCCCCCceEEEEecCeEEEEEecCCEEEEEEecC
Confidence 579999999999999887553 221 22333433222210 1234445554 4777788788999999999999
Q ss_pred CCChhHHHHHHHHHHHHHhh
Q 014292 74 EMPPLMGIEFLCRVADILSD 93 (427)
Q Consensus 74 ~~n~l~~~~~L~~~~~~l~~ 93 (427)
+.|.-.++++=+.+..+|.+
T Consensus 116 ~aNtG~Il~Le~~L~p~l~~ 135 (143)
T 3cpt_A 116 SANTGLIVSLEKELAPLFEE 135 (143)
T ss_dssp TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCchhHhhhHHHHHHHHHH
Confidence 99998888776666666654
No 16
>3cue_A Transport protein particle 23 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=82.84 E-value=18 Score=32.40 Aligned_cols=22 Identities=18% Similarity=0.575 Sum_probs=20.4
Q ss_pred CeEEEEEEcCCCCEEEEEccCC
Q 014292 1 MLQCIFLLADNGAVILEKQLTG 22 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~ 22 (427)
||.+|+|+|+.|..|++|.|..
T Consensus 2 ~i~sl~IiNk~GglIY~r~~~~ 23 (219)
T 3cue_A 2 AIETILVINKSGGLIYQRNFTN 23 (219)
T ss_dssp CEEEEEEECTTSCEEEEEECSS
T ss_pred eeEEEEEEeCCCCEEeehhhcc
Confidence 5899999999999999999975
No 17
>3bw6_A Synaptobrevin homolog YKT6; YKT6P, farnesylation, vacuole fusion, snare, coiled coil, lipoprotein, membrane, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 1h8m_A 1iou_A
Probab=82.72 E-value=19 Score=29.94 Aligned_cols=94 Identities=18% Similarity=0.089 Sum_probs=57.1
Q ss_pred eEEEEEEcCCC--CEEEEEccCCCCC---CcchHHHH----HHHHhccCCCCCCCCEEEcCCEEEEEE-EeCCEEEEEEe
Q 014292 2 LQCIFLLADNG--AVILEKQLTGHRV---DRSICDWF----WDHVISQGDSFKSMPVIASPTHYIFQI-VRAGITFLACT 71 (427)
Q Consensus 2 I~~i~Ild~~G--~~l~~r~y~~~~~---~~~~~~~f----~~~~~~~~~~~~~~pii~~~~~~~~~~-~~~~L~fv~~~ 71 (427)
|-++.|+-..+ -++++..+.--.. .|+.+.+| -+.+..+...+.. --++.+.+.++|. ..+++.++|++
T Consensus 7 l~~~~v~r~~~~~~~~L~~~~d~s~f~ffqr~sv~ef~~~~ar~i~~r~~~~~R-~sv~~~~y~fH~~~~~~gl~~l~i~ 85 (144)
T 3bw6_A 7 IYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGQR-QSIEEGNYIGHVYARSEGICGVLIT 85 (144)
T ss_dssp EEEEEEEECCSSSCEEEEEEECCTTSCTTTTTHHHHHHHHHHHHHHHHCCTTEE-EEEEETTEEEEEEECTTSEEEEEEE
T ss_pred EEEEEEEecCCCCCeEeEeeecccccChhhhhhHHHHHHHHHHHHHhhCCCCce-EEEEeCCEEEEEEEecCCEEEEEEE
Confidence 34555654332 4556665542122 25444443 4444433221211 1344577666666 66999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHhhhcc
Q 014292 72 QVEMPPLMGIEFLCRVADILSDYLG 96 (427)
Q Consensus 72 ~~~~n~l~~~~~L~~~~~~l~~y~~ 96 (427)
+.+-+.-+.+.||+.+.+-...-++
T Consensus 86 D~~yp~rvAF~~L~~i~~eF~~~y~ 110 (144)
T 3bw6_A 86 DKEYPVRPAYTLLNKILDEYLVAHP 110 (144)
T ss_dssp ETTSCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCChhHHHHHHHHHHHHHHHHcc
Confidence 9999999999999988887766555
No 18
>3kyq_A YKT6, synaptobrevin homolog YKT6; V-snare homolog, lipid binding, cytoplasmic vesicle, ER-GOLG transport, golgi apparatus, lipoprotein; HET: DPV; 2.44A {Rattus norvegicus}
Probab=82.50 E-value=13 Score=32.81 Aligned_cols=94 Identities=13% Similarity=0.148 Sum_probs=59.6
Q ss_pred eEEEEEEcCCCC-E-EEEEccCCCCC---CcchHHH---HH-HHHhccCCCCCCCCEEEcCCEEEE-EEEeCCEEEEEEe
Q 014292 2 LQCIFLLADNGA-V-ILEKQLTGHRV---DRSICDW---FW-DHVISQGDSFKSMPVIASPTHYIF-QIVRAGITFLACT 71 (427)
Q Consensus 2 I~~i~Ild~~G~-~-l~~r~y~~~~~---~~~~~~~---f~-~~~~~~~~~~~~~pii~~~~~~~~-~~~~~~L~fv~~~ 71 (427)
|.+|.|+...|+ + +++..|.--.. .|..+.+ |. +.+..+...+ .---++.+.+.++ |...+++.++|++
T Consensus 4 ~~~~~v~~~~~~~~~~l~~~~dlssf~~f~r~sv~ef~~f~~r~il~r~~~~-~r~s~~~~~y~fH~y~~~~gl~yl~it 82 (199)
T 3kyq_A 4 LYSLSVFYKGEPKAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKG-SRASVKEQEYLCHVYVRSDSLAGVVIA 82 (199)
T ss_dssp EEEEEEEEECSSCEEEEEEEECCTTSCTTTHHHHHHHHHHHHHHHHHTSCTT-EEEEEECSSEEEEEEECTTSEEEEEEE
T ss_pred EEEEEEEEcCCCCceEEeeecccccccceehHhHHHHHHHHHHHHHhcCCCC-CeEEEEeCCEEEEEEEecCCEEEEEEE
Confidence 456777765444 3 34554442122 2554443 33 3444432211 1113455676666 6888999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHhhhcc
Q 014292 72 QVEMPPLMGIEFLCRVADILSDYLG 96 (427)
Q Consensus 72 ~~~~n~l~~~~~L~~~~~~l~~y~~ 96 (427)
+.+-+.-..+.||+.+.+-+..-++
T Consensus 83 d~~yp~r~AF~fL~ei~~eF~~~~~ 107 (199)
T 3kyq_A 83 DSEYPSRVAFTLLEKVLDEFSKQVD 107 (199)
T ss_dssp ETTSCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999988877776
No 19
>1nrj_A Signal recognition particle receptor alpha subunit homolog; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: d.110.4.4
Probab=82.02 E-value=4.6 Score=33.60 Aligned_cols=41 Identities=15% Similarity=0.307 Sum_probs=33.1
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccC
Q 014292 1 MLQCIFLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQG 41 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~ 41 (427)
||+.+.|+..+|++++...--+.......+..|..+++..+
T Consensus 1 M~dQf~IFTp~GqVLy~yn~l~kKf~e~qiN~fIS~LitsP 41 (158)
T 1nrj_A 1 MFDQLAVFTPQGQVLYQYNCLGKKFSEIQINSFISQLITSP 41 (158)
T ss_dssp CCCEEEEECTTCBEEEEEETTSCCCCHHHHHHHHHHHHHSC
T ss_pred CcceEEEeccCceEEEEecccCcchHHHHHHHHHHHHhcCC
Confidence 99999999999999998764332556667889999988753
No 20
>2j3t_C Trafficking protein particle complex subunit 1, trafficking protein particle complex subunit 3; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Mus musculus}
Probab=80.68 E-value=12 Score=31.26 Aligned_cols=91 Identities=11% Similarity=0.170 Sum_probs=52.9
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCC----C-cch----------HHHHHHHHhccCCCCCCCCEEEcCCEEEE-EEEeCC
Q 014292 1 MLQCIFLLADNGAVILEKQLTGHRV----D-RSI----------CDWFWDHVISQGDSFKSMPVIASPTHYIF-QIVRAG 64 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~~~----~-~~~----------~~~f~~~~~~~~~~~~~~pii~~~~~~~~-~~~~~~ 64 (427)
||.+++|+|++|.+|+++.|.. .. + .+. +..+.+++.. ......--.+..+.+.++ |.-..+
T Consensus 2 ~i~~~~Ii~k~g~~iy~~~~~~-~~~~~~~~~~~~~ll~g~~~Sl~~i~~klsp-~~~~~~~~~~~t~~ykl~~~~T~Tg 79 (145)
T 2j3t_C 2 TVHNLYLFDRNGVCLHYSEWHR-KKQAGIPKEEEYKLMYGMLFSIRSFVSKMSP-LDMKDGFLSFQTSRYKLHYYETPTG 79 (145)
T ss_dssp CEEEEEEECTTSCEEEEEESSC-SSCCSSCHHHHHHHHHHHHHHHHHHHHHHCS-SCCSSCEEEEECSSCEEEEEECTTS
T ss_pred eEEEEEEEeCCCCEEEeeeecC-CCcCCCCcchHHHHHHHHHHHHHHHHHHhCC-CCCCCceEEEecCCEEEEEEEcCCC
Confidence 5889999999999999999964 22 1 111 1122333221 111111123344655553 456678
Q ss_pred EEEEEEecCCCChhHHHHHHHHHH-HHHhhhc
Q 014292 65 ITFLACTQVEMPPLMGIEFLCRVA-DILSDYL 95 (427)
Q Consensus 65 L~fv~~~~~~~n~l~~~~~L~~~~-~~l~~y~ 95 (427)
+-|+++++..++. +=++|+++. ++.-+|.
T Consensus 80 iKFvl~td~~~~~--i~~~l~~iy~~lYv~~v 109 (145)
T 2j3t_C 80 IKVVMNTDLGVGP--IRDVLHHIYSALYVEFV 109 (145)
T ss_dssp CEEEEEECTTCCC--CHHHHHHHHHTTHHHHT
T ss_pred CEEEEEecCCcch--HHHHHHHHHHHHHHHHH
Confidence 9999999876544 335666666 5555543
No 21
>2fh5_A Signal recognition particle receptor alpha subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Homo sapiens} SCOP: d.110.4.4 PDB: 2go5_1
Probab=77.91 E-value=19 Score=31.45 Aligned_cols=93 Identities=11% Similarity=0.023 Sum_probs=56.3
Q ss_pred CeEEEEEEcCCCCEEEEEccCCCCCCcchHHHHHHHHhccCCCCCCCCEEEcCCEEEEEEEeCC--EEEEEEecCCCChh
Q 014292 1 MLQCIFLLADNGAVILEKQLTGHRVDRSICDWFWDHVISQGDSFKSMPVIASPTHYIFQIVRAG--ITFLACTQVEMPPL 78 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~~~~~~~~~~f~~~~~~~~~~~~~~pii~~~~~~~~~~~~~~--L~fv~~~~~~~n~l 78 (427)
|++.+.|+++.|=+|-+..-.. ......++++.+.++-... . ..+.+..+.+.+-+...|+ |.||++-..--+..
T Consensus 10 ~~D~~~IfTkGGvVLWs~~~~~-~~~~~~IN~LIr~VlLEER-~-~~~~y~~d~ytlkW~l~NEl~LVFVvVYQ~iL~L~ 86 (185)
T 2fh5_A 10 MVDFFTIFSKGGLVLWCFQGVS-DSCTGPVNALIRSVLLQER-G-GNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLT 86 (185)
T ss_dssp SCSEEEEEETTSBEEEEEBTTT-BSCCCHHHHHHHHTGGGC---------CCCCCEEEEEEETTTTEEEEEEESCGGGHH
T ss_pred ceeEEEEEeCCeEEEEeecCCc-ccccchHHHHHHHhhhccc-c-CCCceeEcCeEEEEEEeccCCEEEEEEEcccccch
Confidence 8899999999999998843222 2335567887777664322 2 2234556776666566665 78888877644444
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 014292 79 MGIEFLCRVADILSDYLG 96 (427)
Q Consensus 79 ~~~~~L~~~~~~l~~y~~ 96 (427)
.+=+||..+...+.+-++
T Consensus 87 YiD~LL~~v~~~Fv~~Y~ 104 (185)
T 2fh5_A 87 YVDKLIDDVHRLFRDKYR 104 (185)
T ss_dssp HHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555555555555443
No 22
>3cue_C Transport protein particle 18 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=61.40 E-value=35 Score=28.87 Aligned_cols=90 Identities=9% Similarity=0.156 Sum_probs=48.4
Q ss_pred CeEEEEEEcCCCCEEEEEccCCC------CCC-cchH-------------HHHHHHHhccCCCCCCCCE--EEcCCEEEE
Q 014292 1 MLQCIFLLADNGAVILEKQLTGH------RVD-RSIC-------------DWFWDHVISQGDSFKSMPV--IASPTHYIF 58 (427)
Q Consensus 1 MI~~i~Ild~~G~~l~~r~y~~~------~~~-~~~~-------------~~f~~~~~~~~~~~~~~pi--i~~~~~~~~ 58 (427)
||.+++|+|++|.+|+.|.|... ..+ +... ..|.+++. .......+ +..+.+.++
T Consensus 2 ~i~~~~Ii~r~g~~iy~~~~~~~~~~~~~~~~~~~~~~~~~ll~g~~~SL~~i~~kls---~~~~~~~f~~~~T~~ykl~ 78 (159)
T 3cue_C 2 GIYSFWIFDRHCNCIFDREWTLASNSASGTINSKQNEEDAKLLYGMIFSLRSITQKLS---KGSVKNDIRSISTGKYRVH 78 (159)
T ss_dssp CCCEEEEECSSSCEEECCCC-------------CCHHHHHHHHHHHHHHHHHHHHHSC---CSSSCCCEEEEECSSCBEE
T ss_pred eEEEEEEEcCCCceEEeeeeccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhC---CCCCCCCeEEEeeCCEEEE
Confidence 57899999999999999988530 111 1111 11222211 11112233 233544443
Q ss_pred -EEEeCCEEEEEEecCCCChhHHHHHHHHHHH-HHhhhc
Q 014292 59 -QIVRAGITFLACTQVEMPPLMGIEFLCRVAD-ILSDYL 95 (427)
Q Consensus 59 -~~~~~~L~fv~~~~~~~n~l~~~~~L~~~~~-~l~~y~ 95 (427)
|.--.++-||++++..++.+- ++|+++.+ +.-+|.
T Consensus 79 ~~eT~TgiKFvl~td~~~~~i~--~~l~~iy~~lYv~yv 115 (159)
T 3cue_C 79 TYCTASGLWFVLLSDFKQQSYT--QVLQYIYSHIYVKYV 115 (159)
T ss_dssp EECCSSCCEEEEECCSSSSCTH--HHHHHHHHHHHHHHH
T ss_pred EEEeCCCCEEEEEeCCCcchHH--HHHHHHHHHHHHHHH
Confidence 355578999999987654433 45666665 555543
No 23
>2j3w_A Sedlin, trafficking protein particle complex protein 2; multisubunit tethering factor, trapp, palmitate, transport, lipoprotein; HET: PLM; 2.1A {Mus musculus} SCOP: d.110.4.3 PDB: 1h3q_A
Probab=50.96 E-value=1e+02 Score=25.27 Aligned_cols=92 Identities=9% Similarity=0.017 Sum_probs=48.9
Q ss_pred eEEEEEEcCCCCEEEEEccCCCCCCcc---hH-HHH----HHH---HhccCCCCCCCCEEE---cCCEEEE-EEEeCCEE
Q 014292 2 LQCIFLLADNGAVILEKQLTGHRVDRS---IC-DWF----WDH---VISQGDSFKSMPVIA---SPTHYIF-QIVRAGIT 66 (427)
Q Consensus 2 I~~i~Ild~~G~~l~~r~y~~~~~~~~---~~-~~f----~~~---~~~~~~~~~~~pii~---~~~~~~~-~~~~~~L~ 66 (427)
|.+++|++++|.+|+.+.|.. .-... .. ..+ ... +..........-+.. .+.+.++ |....++-
T Consensus 6 i~~~~Ii~~~~~ply~~~~~~-~~~~~~~~~~~l~~~~i~hs~ldiv~~~~~~~~~~~l~~~~~~~~y~v~~~~T~tg~K 84 (142)
T 2j3w_A 6 SFYFVIVGHHDNPVFEMEFLP-PGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMR 84 (142)
T ss_dssp CEEEEEECTTSCEEEEEEECC-SCCGGGHHHHHHHHHHHHHHHHHHHHHHGGGCSCSEEEEEEEETTEEEEEEECTTCCE
T ss_pred EEEEEEEeCCCCEEEEEecCC-cCcCCccHHHHHHHHHHHHHHHHHHHHhcCCCCcceeEeeecccceEEEEEEcCCCcE
Confidence 579999999999999999975 32211 11 011 000 000100011111112 2444443 45667899
Q ss_pred EEEEecCCCChhHHHHHHHHHHHHHhhhc
Q 014292 67 FLACTQVEMPPLMGIEFLCRVADILSDYL 95 (427)
Q Consensus 67 fv~~~~~~~n~l~~~~~L~~~~~~l~~y~ 95 (427)
|+++++.. +.--+-++|+++.++.-+|.
T Consensus 85 fvl~~d~~-~~~~i~~~~~~iy~~Y~~~v 112 (142)
T 2j3w_A 85 FIMLHDVR-QEDGIKNFFTDVYDLYIKFA 112 (142)
T ss_dssp EEEEESSC-CHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCC-CcHHHHHHHHHHHHHHHHHh
Confidence 99998763 33445566666666555554
No 24
>3vjz_A DMP19, putative uncharacterized protein; helix bundle, DNA mimic, gene regulation; 1.80A {Neisseria meningitidis}
Probab=32.64 E-value=10 Score=32.45 Aligned_cols=52 Identities=10% Similarity=0.175 Sum_probs=34.1
Q ss_pred CCChhHHHHHHHHHHHHHhhhccCCCHHH-----HHhhHHHHHHHHH-HHHhCCcccc
Q 014292 74 EMPPLMGIEFLCRVADILSDYLGELNEDL-----IKDNFVIVYELLD-EMIDNGFPLT 125 (427)
Q Consensus 74 ~~n~l~~~~~L~~~~~~l~~y~~~l~e~~-----i~~N~~~v~~lld-Eiid~G~p~~ 125 (427)
+.++-..=+||+.|.+.....++.++++. --.+.-+.|.+|| |++++|+.|.
T Consensus 10 ~~~~~~~d~fl~~~~da~~~~i~~l~~e~m~~Ls~~Q~tLLAy~~L~~EV~~GGFvQL 67 (166)
T 3vjz_A 10 DIRQQEPSALLYTLVSAYLEHTAQTGDESLSCLSDDQHTLTAFCYLDSQVEEGGFVQL 67 (166)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHHHHHCTTSSSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccChHHHHHHHHHHHHHHHHHhhHHHHHHcCHHHHHHHHHHHHHHHHHcCChHhh
Confidence 33444556688888888888776533322 2345567777666 7778999875
Done!