Query 014294
Match_columns 427
No_of_seqs 204 out of 1778
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 08:59:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014294.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014294hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 2.2E-56 7.5E-61 443.4 25.9 333 66-426 8-384 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 4E-55 1.4E-59 429.0 22.2 289 77-426 52-355 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 4.5E-55 1.5E-59 429.5 18.4 288 78-426 58-368 (383)
4 2apr_A Rhizopuspepsin; hydrola 100.0 7.7E-53 2.7E-57 406.5 23.0 283 78-426 12-309 (325)
5 3aup_A SBG7S, BG, basic 7S glo 100.0 3.1E-52 1E-56 413.9 27.3 329 67-426 10-371 (403)
6 1dpj_A Proteinase A; proteinas 100.0 3.3E-52 1.1E-56 403.1 25.6 286 78-426 10-314 (329)
7 3cms_A Chymosin B; hydrolase, 100.0 8.1E-53 2.8E-57 406.2 20.8 284 78-426 11-308 (323)
8 4aa9_A Chymosin; hydrolase, as 100.0 1.1E-52 3.8E-57 405.0 19.9 285 77-426 7-305 (320)
9 1tzs_A Cathepsin E; hydrolase, 100.0 2.9E-52 9.9E-57 406.8 23.0 289 78-426 20-327 (351)
10 1am5_A Pepsin, acid proteinase 100.0 1.7E-52 5.8E-57 404.2 21.0 286 78-426 9-309 (324)
11 1htr_B Gastricsin; aspartyl pr 100.0 6.8E-52 2.3E-56 400.8 23.7 289 78-426 9-314 (329)
12 1j71_A Candidapepsin, aspartic 100.0 6.4E-52 2.2E-56 401.8 22.0 280 79-426 10-309 (334)
13 1qdm_A Prophytepsin; aspartic 100.0 5.5E-52 1.9E-56 418.3 21.0 300 78-426 49-463 (478)
14 3c9x_A Trichoderma reesei aspa 100.0 3.1E-52 1.1E-56 403.0 17.3 288 78-426 12-315 (329)
15 1mpp_A Pepsin; hydrolase(acid 100.0 1.8E-51 6.2E-56 402.9 23.0 288 78-426 15-340 (361)
16 1oew_A Endothiapepsin; hydrola 100.0 3.9E-52 1.3E-56 402.3 18.0 286 79-426 13-314 (329)
17 3k1w_A Renin; protease, altern 100.0 1.2E-51 4.1E-56 401.3 20.3 287 78-426 15-325 (341)
18 2qzx_A Candidapepsin-5; aspart 100.0 1.6E-51 5.5E-56 400.3 20.7 283 79-426 10-316 (342)
19 1miq_A Plasmepsin; aspartic pr 100.0 5.4E-51 1.8E-55 400.4 23.2 280 78-426 59-359 (375)
20 1t6e_X Xylanase inhibitor; two 100.0 1.2E-50 4.1E-55 399.5 25.5 313 77-426 10-358 (381)
21 3fv3_A SAPP1P-secreted asparti 100.0 4.5E-51 1.5E-55 396.9 22.2 277 79-426 10-314 (339)
22 3lpj_A Beta-secretase 1; alzhe 100.0 2.2E-50 7.6E-55 406.5 27.0 300 78-426 71-405 (455)
23 3pvk_A Candidapepsin-2; hydrol 100.0 7.2E-51 2.5E-55 395.9 21.2 284 79-426 10-316 (342)
24 2bju_A Plasmepsin II; aspartic 100.0 4.1E-51 1.4E-55 407.8 18.8 282 78-426 135-435 (453)
25 3qvc_A Histo-aspartic protease 100.0 1.3E-50 4.4E-55 404.8 22.2 281 77-426 133-434 (451)
26 2ewy_A Beta-secretase 2; BACE2 100.0 5.8E-50 2E-54 395.4 24.6 297 79-426 11-340 (383)
27 2qp8_A Beta-secretase 1; BACE1 100.0 1.1E-49 3.8E-54 394.7 26.7 296 79-426 19-352 (395)
28 3vf3_A Beta-secretase 1; struc 100.0 3.7E-49 1.3E-53 391.9 29.2 299 79-426 26-359 (402)
29 1yg9_A Aspartic protease BLA G 100.0 2.6E-50 9E-55 389.5 20.4 284 77-426 13-314 (330)
30 1ibq_A Aspergillopepsin; aspar 100.0 1.6E-49 5.3E-54 383.4 18.4 283 79-426 12-310 (325)
31 1izd_A Aspartic proteinase; su 100.0 1.9E-49 6.6E-54 382.3 19.1 282 79-426 13-308 (323)
32 1bxo_A Protein (penicillopepsi 100.0 2.4E-49 8.2E-54 381.8 14.5 281 79-426 13-308 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 2E-47 7E-52 371.1 21.9 273 80-426 11-318 (340)
34 1b5f_A Protein (cardosin A); h 100.0 3.2E-43 1.1E-47 324.2 15.9 215 78-340 10-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 3.8E-32 1.3E-36 250.9 17.7 205 201-426 5-226 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 3.3E-23 1.1E-27 161.9 8.3 83 78-190 10-96 (97)
37 1b5f_B Protein (cardosin A); h 99.1 6E-11 2.1E-15 90.4 4.5 62 362-426 8-72 (87)
38 2hs1_A HIV-1 protease; ultra-h 88.1 0.57 2E-05 35.5 4.4 28 84-113 10-37 (99)
39 1fmb_A EIAV protease; hydrolas 87.4 0.53 1.8E-05 36.1 3.9 27 83-111 9-35 (104)
40 3ec0_A Protease; HIV-2, inhibi 86.0 0.88 3E-05 34.4 4.3 27 84-112 10-36 (99)
41 3liy_A Protease; hydrolase, hy 84.7 0.76 2.6E-05 35.5 3.4 31 84-114 12-45 (116)
42 2i1a_A DNA damage-inducible pr 82.0 1.2 4.1E-05 36.3 3.9 31 79-111 23-53 (148)
43 2hah_A Protease, retropepsin; 80.1 1.5 5.1E-05 34.2 3.6 25 84-111 16-40 (116)
44 3sqf_A Protease; folded monome 77.2 2.3 7.9E-05 32.9 3.9 28 84-113 11-38 (114)
45 2i1a_A DNA damage-inducible pr 76.2 2.8 9.6E-05 34.0 4.5 29 293-334 31-59 (148)
46 3s8i_A Protein DDI1 homolog 1; 74.8 2.4 8.3E-05 34.6 3.7 32 79-112 21-52 (148)
47 3s8i_A Protein DDI1 homolog 1; 74.0 2.4 8.4E-05 34.6 3.5 34 285-334 24-57 (148)
48 3slz_A GAG-Pro-POL polyprotein 68.0 5.9 0.0002 31.6 4.3 31 80-112 20-50 (132)
49 2rsp_A RSV protease; hydrolase 63.4 6.8 0.00023 30.8 3.8 23 89-113 27-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 62.7 6.1 0.00021 34.0 3.7 27 83-111 9-35 (203)
51 1lya_A Cathepsin D; lysosomal 56.1 9.3 0.00032 28.5 3.4 15 315-329 30-44 (97)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.8 26 0.00089 30.0 4.4 28 83-112 113-140 (203)
53 1ibq_A Aspergillopepsin; aspar 37.1 29 0.00099 31.9 4.3 38 276-330 7-44 (325)
54 1fmb_A EIAV protease; hydrolas 35.3 26 0.00089 26.5 2.9 33 286-331 6-38 (104)
55 3fv3_A SAPP1P-secreted asparti 34.3 24 0.00081 32.7 3.2 37 277-329 5-43 (339)
56 1j71_A Candidapepsin, aspartic 33.8 25 0.00084 32.5 3.2 36 278-329 6-43 (334)
57 1wkr_A Polyporopepsin; hydrola 33.8 28 0.00096 32.2 3.6 36 277-328 5-42 (340)
58 3slz_A GAG-Pro-POL polyprotein 32.2 37 0.0013 26.9 3.5 26 290-328 24-49 (132)
59 2hs1_A HIV-1 protease; ultra-h 32.2 29 0.00098 26.0 2.7 30 286-328 6-35 (99)
60 2qzx_A Candidapepsin-5; aspart 31.7 28 0.00095 32.3 3.2 36 278-329 6-43 (342)
61 1bxo_A Protein (penicillopepsi 30.0 38 0.0013 31.1 3.7 38 276-330 8-45 (323)
62 2hah_A Protease, retropepsin; 29.9 38 0.0013 26.2 3.1 30 285-328 11-40 (116)
63 3ec0_A Protease; HIV-2, inhibi 29.7 35 0.0012 25.6 2.7 29 286-327 6-34 (99)
64 1izd_A Aspartic proteinase; su 28.8 41 0.0014 30.9 3.7 38 276-330 8-45 (323)
65 3pvk_A Candidapepsin-2; hydrol 28.6 34 0.0012 31.6 3.2 32 282-329 10-43 (342)
66 1oew_A Endothiapepsin; hydrola 28.0 63 0.0022 29.6 4.9 32 282-329 13-46 (329)
67 1yg9_A Aspartic protease BLA G 26.8 41 0.0014 31.0 3.4 31 283-329 16-46 (330)
68 1b5f_A Protein (cardosin A); h 24.6 50 0.0017 28.8 3.4 15 315-329 30-44 (239)
69 1htr_B Gastricsin; aspartyl pr 24.4 55 0.0019 30.0 3.8 37 277-329 5-43 (329)
70 3c9x_A Trichoderma reesei aspa 22.3 63 0.0022 29.6 3.7 33 282-330 13-47 (329)
71 2apr_A Rhizopuspepsin; hydrola 21.6 60 0.0021 29.7 3.4 32 282-329 13-46 (325)
72 1lya_B Cathepsin D; lysosomal 20.2 85 0.0029 27.1 4.0 32 81-112 99-137 (241)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.2e-56 Score=443.40 Aligned_cols=333 Identities=22% Similarity=0.375 Sum_probs=264.7
Q ss_pred ccccccCCCCCCCCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCC
Q 014294 66 SIDLELGGNGHPSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSD 145 (427)
Q Consensus 66 ~~~~~~~~~~~~~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~ 145 (427)
...+|++++ ..+++|+++|.||||||++.|++||||+++||+|.+| .+|+||+.+.|.+
T Consensus 8 ~~~~pv~~d---~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s 66 (413)
T 3vla_A 8 ALVVPVKKD---ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRT 66 (413)
T ss_dssp EEEEEEEEC---TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTS
T ss_pred cEEEEeeec---CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCc
Confidence 345677653 3679999999999999999999999999999999765 3699999999999
Q ss_pred cccCCcCCCC--------CCCCCCCCcceeeEEc-CCCCeeeeeEEEEEEEEcccCCCCc-ccCCCceeeEEeeecccCC
Q 014294 146 NFCRTTYNNR--------YPSCSPGVRCEYVVTY-GDGSSTSGYFVRDIIQLNQASGNLK-TAPLNSSVIFGCGNRQSGD 215 (427)
Q Consensus 146 ~~C~~~~~~~--------~~~c~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~~~~~~-~~~~~~~~~fG~~~~~~~~ 215 (427)
+.|....... ...|. ++.|.|.+.| ++++.+.|++++|+|+|+..++... ....++++.|||++.+...
T Consensus 67 ~~C~~~~~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~ 145 (413)
T 3vla_A 67 SQCSLSGSIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQ 145 (413)
T ss_dssp HHHHHTTCCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGT
T ss_pred ccccccccCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccccccc
Confidence 9997654321 13454 4679999999 4888889999999999986543311 0124568999999986322
Q ss_pred CCCCCCCCcceeeecCCCCCcHHHHHHhcCCCCCceeeecccc-CCcceEEeCCcCC---------CC-ceeecCCCCC-
Q 014294 216 LGSSTDAAVDGILGFGQANSSLLSQLAAAGNVRKEFAHCLDVV-KGGGIFAIGDVVS---------PK-VKTTPMVPNM- 283 (427)
Q Consensus 216 ~~~~~~~~~~GIlGLg~~~~s~~~~l~~~~~i~~~Fs~~l~~~-~~~G~l~~Gg~d~---------~~-~~~~p~~~~~- 283 (427)
. .....|||||||++.+|++.||.+++.++++||+||.+. +.+|.|+||++|. .. ++|+|++.++
T Consensus 146 g---~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~ 222 (413)
T 3vla_A 146 N---LASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPV 222 (413)
T ss_dssp T---SCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSS
T ss_pred C---cccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCc
Confidence 1 234689999999999999999999988889999999974 5679999999874 24 9999998653
Q ss_pred ------------CcceEEEEEEEECCEEeeCCCCCcccC--CCCcEEEeccccccccCHHHHHHHHHHHHHhCC--CCcc
Q 014294 284 ------------PHYNVILEEVEVGGNPLDLPTSLLGTG--DERGTIIDSGTTLAYLPPMLYDLVLSQILDRQP--GLKM 347 (427)
Q Consensus 284 ------------~~~~v~l~~i~v~~~~~~~~~~~~~~~--~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~--~~~~ 347 (427)
.+|+|+|++|+||++.+.++...|..+ +.+++||||||++++||.++|++|.++|.+... ..+.
T Consensus 223 ~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~ 302 (413)
T 3vla_A 223 STSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITR 302 (413)
T ss_dssp CCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCc
Confidence 689999999999999998887766533 357899999999999999999999999987642 1111
Q ss_pred -cccCCCCceeeecCCC----CccCceEEEEecC-CcEEEECCCceEEEeCCceEEEEEEeCCCCCCCCCCeEEEccccc
Q 014294 348 -HTVEEQFSCFQFSKNV----DDAFPTVTFKFKG-SLSLTVYPHEYLFQIREDVWCIGWQNGGLQNHDGRQMILLGGTVY 421 (427)
Q Consensus 348 -~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g-g~~~~l~~~~y~~~~~~~~~Cl~i~~~~~~~~~~~~~~ilG~~fL 421 (427)
........||..++.. ...+|+|+|+|+| +++|+|++++|+++..++..|++|...+.. ..+.||||+.||
T Consensus 303 ~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~---~~~~~IlGd~fl 379 (413)
T 3vla_A 303 VASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSN---LRTSIVIGGHQL 379 (413)
T ss_dssp ECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESS---CSSSEEECHHHH
T ss_pred CCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCC---cccceeEehhhh
Confidence 1122346899876532 1479999999955 489999999999987667899998876531 235799999999
Q ss_pred ccccC
Q 014294 422 SCFML 426 (427)
Q Consensus 422 r~~yv 426 (427)
|++||
T Consensus 380 ~~~~v 384 (413)
T 3vla_A 380 EDNLV 384 (413)
T ss_dssp TTEEE
T ss_pred cCeEE
Confidence 99997
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4e-55 Score=429.01 Aligned_cols=289 Identities=25% Similarity=0.438 Sum_probs=237.2
Q ss_pred CCCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSR--CPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 77 ~~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~--C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
++.+.+|+++|+||||||++.|++||||+++||+|..|.. |.. ++.|||++|+|++...
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 112 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSD-------HNQFNPDDSSTFEATS------------ 112 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCEEEE------------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCC-------CCCCCCccCcCcEECC------------
Confidence 4668999999999999999999999999999999999964 543 4799999999999975
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+.+. ....++||||||++.
T Consensus 113 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~--~~~~~dGIlGLg~~~ 171 (370)
T 3psg_A 113 ----------QELSITYGTGS-MTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFL--YYAPFDGILGLAYPS 171 (370)
T ss_dssp ----------EEEEEESSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGG--GGCSCSEEEECSCGG
T ss_pred ----------cEEEEEeCCce-EEEEEEEEEEeeCCc--------ccCCeEEEEEEeeccccc--ccCCccceeccCCcc
Confidence 89999999999 799999999999874 455899999998865432 345689999999875
Q ss_pred C------cHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCEEeeC
Q 014294 235 S------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDL 302 (427)
Q Consensus 235 ~------s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~ 302 (427)
. +++++|++||.|+ ++||+||.+. ..+|.|+|||+|++ .+.|+|+. .+.+|.|.+++|+||++.+..
T Consensus 172 ~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~ 250 (370)
T 3psg_A 172 ISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC 250 (370)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC
T ss_pred ccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec
Confidence 4 6899999999997 9999999975 45899999999975 48999998 568999999999999987652
Q ss_pred CCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEE
Q 014294 303 PTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTV 382 (427)
Q Consensus 303 ~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l 382 (427)
.....+|+||||+++++|.+++++|.+++++... .. .+|.++|.....+|+|+|+| +|.+|+|
T Consensus 251 -------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~----~~-----g~~~v~C~~~~~lP~i~f~~-~g~~~~l 313 (370)
T 3psg_A 251 -------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASEN----SD-----GEMVISCSSIDSLPDIVFTI-DGVQYPL 313 (370)
T ss_dssp -------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC----TT-----CCEECCGGGGGGCCCEEEEE-TTEEEEE
T ss_pred -------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCccc----CC-----CcEEEECCCcccCCcEEEEE-CCEEEEE
Confidence 2256799999999999999999999999865431 11 22334445556799999999 8999999
Q ss_pred CCCceEEEeCCceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 383 YPHEYLFQIREDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 383 ~~~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+++|+++ .+ ..|+ +|...+..... .+.||||++|||++|+
T Consensus 314 ~~~~yi~~-~~-~~C~~~~~~~~~~~~~-~~~~ILG~~Fl~~~y~ 355 (370)
T 3psg_A 314 SPSAYILQ-DD-DSCTSGFEGMDVPTSS-GELWILGDVFIRQYYT 355 (370)
T ss_dssp CHHHHEEE-CS-SCEEESEEEECCCTTS-CCEEEECHHHHTTEEE
T ss_pred CHHHhccc-CC-CEEEEEEEeCCCCCCC-CCcEEeChHHhcceEE
Confidence 99999998 33 4698 67765432222 2479999999999996
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4.5e-55 Score=429.55 Aligned_cols=288 Identities=22% Similarity=0.393 Sum_probs=238.7
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS----RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 153 (427)
+.+..|+++|.||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+||+...
T Consensus 58 ~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~-------~~y~~~~SsT~~~~~----------- 119 (383)
T 2x0b_A 58 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYKHNG----------- 119 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS-------CCBCGGGCTTCEEEE-----------
T ss_pred cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC-------CCCCCCCCCcEEECC-----------
Confidence 46789999999999999999999999999999999985 47543 789999999999865
Q ss_pred CCCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCC
Q 014294 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQA 233 (427)
Q Consensus 154 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~ 233 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||++.+.+..+ ....+|||||||++
T Consensus 120 -----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f--~~~~~dGIlGLg~~ 176 (383)
T 2x0b_A 120 -----------TELTLRYSTGT-VSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPF--MLAEFDGVVGMGFI 176 (383)
T ss_dssp -----------EEEEEECSSCE-EEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHH--TTCSSSEEEECSCG
T ss_pred -----------cEEEEEcCCcc-EEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCccc--ccCCCceEeccCCC
Confidence 89999999998 799999999999864 455 99999998755321 24568999999997
Q ss_pred CC------cHHHHHHhcCCCC-Cceeeecccc-C----CcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECC
Q 014294 234 NS------SLLSQLAAAGNVR-KEFAHCLDVV-K----GGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGG 297 (427)
Q Consensus 234 ~~------s~~~~l~~~~~i~-~~Fs~~l~~~-~----~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~ 297 (427)
.. +++++|.+||.++ ++||+||.+. . .+|.|+|||+|+++ +.|+|+. .+.+|+|.+++|+||+
T Consensus 177 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v~~ 255 (383)
T 2x0b_A 177 EQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGS 255 (383)
T ss_dssp GGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEESS
T ss_pred ccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEeCC
Confidence 64 5889999999997 9999999885 2 37999999999874 8899998 6789999999999999
Q ss_pred EEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCC
Q 014294 298 NPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGS 377 (427)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg 377 (427)
+.+. ......+|+||||+++++|.+++++|.+++.+.. ....+.++| ...+.+|+|+|+| +|
T Consensus 256 ~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v~C-----~~~~~~P~i~f~~-~g 317 (383)
T 2x0b_A 256 STLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVVKC-----NEGPTLPDISFHL-GG 317 (383)
T ss_dssp CCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEEEG-----GGTTTCCCEEEEE-TT
T ss_pred ceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEEec-----cccccCceEEEEE-CC
Confidence 7642 1235779999999999999999999999987543 112222456 3345799999999 89
Q ss_pred cEEEECCCceEEEeCC--ceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 378 LSLTVYPHEYLFQIRE--DVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 378 ~~~~l~~~~y~~~~~~--~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
.+|+||+++|+++... +..|+ +|...+.+.. ..+.||||++|||++|+
T Consensus 318 ~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~-~~~~~ILGd~Fl~~~y~ 368 (383)
T 2x0b_A 318 KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPP-TGPTWALGATFIRKFYT 368 (383)
T ss_dssp EEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTT-TCSCEEECHHHHTTEEE
T ss_pred EEEEECHHHhEeeccCCCCCeEEEEEEecccCCC-CCCcEEEChHHhcceEE
Confidence 9999999999998653 45898 7887654322 24579999999999997
No 4
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=7.7e-53 Score=406.54 Aligned_cols=283 Identities=26% Similarity=0.439 Sum_probs=234.0
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYP 157 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~ 157 (427)
..+..|+++|.||||+|++.|+|||||+++||+|..|..| .+ .++.|||++|+|++...
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~-----~~~~y~~~~SsT~~~~~--------------- 70 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS-----GQTKYDPNQSSTYQADG--------------- 70 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT-----TSCCBCGGGCTTCEEEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc-----CCCCCCcccCCCeeeCC---------------
Confidence 4678999999999999999999999999999999999888 22 34799999999999854
Q ss_pred CCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC--
Q 014294 158 SCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS-- 235 (427)
Q Consensus 158 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 235 (427)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.|. ....+||||||+...
T Consensus 71 -------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~---~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 71 -------RTWSISYGDGSSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFA---SGPNDGLLGLGFDTITT 132 (325)
T ss_dssp -------EEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH---TSSCSEEEECSCGGGCS
T ss_pred -------CEEEEEECCCCCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccc---cCCCceEEEeCCccccc
Confidence 899999999998899999999999864 345899999998765442 234899999998654
Q ss_pred -----cHHHHHHhcCCCC-Cceeeecccc--CCcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCEEeeCC
Q 014294 236 -----SLLSQLAAAGNVR-KEFAHCLDVV--KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLP 303 (427)
Q Consensus 236 -----s~~~~l~~~~~i~-~~Fs~~l~~~--~~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 303 (427)
+++++|+++|+++ ++||+||.+. ...|.|+||++|++ .+.|+|+.....+|.|.+++|+||++ +.
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~-- 209 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV-- 209 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE--
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec--
Confidence 5899999999996 9999999653 56799999999976 48999998667899999999999993 32
Q ss_pred CCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEEC
Q 014294 304 TSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVY 383 (427)
Q Consensus 304 ~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 383 (427)
.....+||||||++++||+++|+++.+++.+..... ..+.++|+ . ..+|+|+|+| +|.+++||
T Consensus 210 ------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~~C~-----~-~~~p~i~f~f-~g~~~~ip 272 (325)
T 2apr_A 210 ------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD----GTYTISCD-----T-SAFKPLVFSI-NGASFQVS 272 (325)
T ss_dssp ------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEECSC-----G-GGCCCEEEEE-TTEEEEEC
T ss_pred ------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC----CeEEEECC-----C-CCCCcEEEEE-CCEEEEEC
Confidence 124579999999999999999999999997765432 12224663 2 3489999999 56699999
Q ss_pred CCceEEEeCCceEEEE-EEeCCCCCCCCCCeEEEcccccccccC
Q 014294 384 PHEYLFQIREDVWCIG-WQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 384 ~~~y~~~~~~~~~Cl~-i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+++|+++.. +..|++ |...+ .+.||||+.|||++|+
T Consensus 273 ~~~~~~~~~-~~~C~~~i~~~~------~~~~iLG~~fl~~~y~ 309 (325)
T 2apr_A 273 PDSLVFEEF-QGQCIAGFGYGN------WGFAIIGDTFLKNNYV 309 (325)
T ss_dssp GGGGEEEEE-TTEEEESEEEES------SSSEEECHHHHTTEEE
T ss_pred HHHEEEcCC-CCeEEEEEEcCC------CCCEEECHHHhcceEE
Confidence 999998754 568985 55443 3579999999999997
No 5
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.1e-52 Score=413.88 Aligned_cols=329 Identities=22% Similarity=0.363 Sum_probs=247.7
Q ss_pred cccccCCCCCCCCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCc
Q 014294 67 IDLELGGNGHPSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDN 146 (427)
Q Consensus 67 ~~~~~~~~~~~~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~ 146 (427)
..+|+.+ +..++.|+++|.||||+|++.|+|||||+++||+|.+| .+|+|++.+.|.+.
T Consensus 10 ~~~pl~~---~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~ 68 (403)
T 3aup_A 10 VVLPVQN---DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHST 68 (403)
T ss_dssp EEEEEEE---CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBH
T ss_pred EEEeeec---CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCc
Confidence 3456642 23678999999999999999999999999999998753 46899999999999
Q ss_pred ccCCcCCC--------CCCCCCCCCcceeeEEcC-CCCeeeeeEEEEEEEEcccCCCC---cccCCCceeeEEeeecccC
Q 014294 147 FCRTTYNN--------RYPSCSPGVRCEYVVTYG-DGSSTSGYFVRDIIQLNQASGNL---KTAPLNSSVIFGCGNRQSG 214 (427)
Q Consensus 147 ~C~~~~~~--------~~~~c~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~i~~~~~~~---~~~~~~~~~~fG~~~~~~~ 214 (427)
.|...... ....|. ++.|.|.+.|+ |++.+.|.+++|+|+|++..+.. .....++++.|||++....
T Consensus 69 ~C~~~~~~~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~ 147 (403)
T 3aup_A 69 QCSRANTHQCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV 147 (403)
T ss_dssp HHHHTTCCCEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG
T ss_pred cccCccccCccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc
Confidence 89765322 223454 36899999998 78889999999999998854321 0012456899999998754
Q ss_pred C-CCCCCCCCcceeeecCCCCCcHHHHHHhcCCCCCceeeecccc-CCcceEEeCCcCC-------C-----CceeecCC
Q 014294 215 D-LGSSTDAAVDGILGFGQANSSLLSQLAAAGNVRKEFAHCLDVV-KGGGIFAIGDVVS-------P-----KVKTTPMV 280 (427)
Q Consensus 215 ~-~~~~~~~~~~GIlGLg~~~~s~~~~l~~~~~i~~~Fs~~l~~~-~~~G~l~~Gg~d~-------~-----~~~~~p~~ 280 (427)
. + .....+||||||++..+++.||.+..+.+++||+||.+. +.+|.|+||+ |+ . .+.|+|++
T Consensus 148 ~~~---~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~ 223 (403)
T 3aup_A 148 QKG---LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLT 223 (403)
T ss_dssp SSS---SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECE
T ss_pred ccC---CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccc
Confidence 3 2 235689999999999999999976655569999999874 5689999999 63 2 68999998
Q ss_pred CC-CCcceEEEEEEEECCEEe-eCCCCCcc--cCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcc-cccCCCCc
Q 014294 281 PN-MPHYNVILEEVEVGGNPL-DLPTSLLG--TGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKM-HTVEEQFS 355 (427)
Q Consensus 281 ~~-~~~~~v~l~~i~v~~~~~-~~~~~~~~--~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~-~~~~~~~~ 355 (427)
.+ ..+|.|+|++|+||++.+ .++...+. ..+..++||||||++++||+++|++|.+++.+....... ........
T Consensus 224 ~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 303 (403)
T 3aup_A 224 ITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGL 303 (403)
T ss_dssp ECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSC
T ss_pred cCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCc
Confidence 54 369999999999999988 66655443 123567999999999999999999999999766532111 00111235
Q ss_pred eeeecCCCCccCceEEEEecCC--cEEEECCCceEEEeCCceEEEEEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 356 CFQFSKNVDDAFPTVTFKFKGS--LSLTVYPHEYLFQIREDVWCIGWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 356 C~~~~~~~~~~~P~i~f~f~gg--~~~~l~~~~y~~~~~~~~~Cl~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
||. |+..+.+|+|+|+|.++ ++|+|++++|+++..++..|++|...+. ...+.||||+.|||++||
T Consensus 304 c~~--c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~---~~~~~~ILG~~fl~~~yv 371 (403)
T 3aup_A 304 CFN--SNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGM---QPRAEITLGARQLEENLV 371 (403)
T ss_dssp EEC--GGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCS---CCSSSEEECHHHHTTSCE
T ss_pred eEE--CCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCC---CCCCcEEEChHHhcCeEE
Confidence 764 33334799999999655 6999999999998765678999987653 123579999999999997
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.3e-52 Score=403.06 Aligned_cols=286 Identities=24% Similarity=0.442 Sum_probs=237.8
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSR--CPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~--C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 155 (427)
+.++.|+++|.||||+|++.|++||||+++||+|..|.. |..+ +.|||++|+|++...
T Consensus 10 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------- 69 (329)
T 1dpj_A 10 YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYKANG------------- 69 (329)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE-------------
T ss_pred cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeEECC-------------
Confidence 457899999999999999999999999999999999975 6543 689999999999854
Q ss_pred CCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccC-CCCCCCCCCcceeeecCCCC
Q 014294 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSG-DLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 156 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~-~~~~~~~~~~~GIlGLg~~~ 234 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ .| .....+||||||+..
T Consensus 70 ---------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f---~~~~~~GilGLg~~~ 128 (329)
T 1dpj_A 70 ---------TEFAIQYGTGS-LEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTF---AFGKFDGILGLGYDT 128 (329)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHH---TTCSCSEEEECSCGG
T ss_pred ---------cEEEEEECCce-EEEEEEEEEEEECCe--------EECCeEEEEEEecCcccc---ccCCcceEEEeCCch
Confidence 89999999995 899999999999864 345899999998754 23 234679999999976
Q ss_pred C------cHHHHHHhcCCCC-CceeeeccccC----CcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEE
Q 014294 235 S------SLLSQLAAAGNVR-KEFAHCLDVVK----GGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNP 299 (427)
Q Consensus 235 ~------s~~~~l~~~~~i~-~~Fs~~l~~~~----~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~ 299 (427)
. +++.+|++||+++ ++||+||.+.. .+|.|+||++|+++ +.|+|+. .+.+|.|.+++|+|+++.
T Consensus 129 ~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~ 207 (329)
T 1dpj_A 129 ISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDEY 207 (329)
T ss_dssp GCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEE
T ss_pred hhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCeE
Confidence 4 4678999999996 99999998642 37999999999865 7899998 568999999999999988
Q ss_pred eeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcE
Q 014294 300 LDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLS 379 (427)
Q Consensus 300 ~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~ 379 (427)
+... ...+||||||++++||++++++|.+++.+... . ..||.++|.....+|+|+|+| +|++
T Consensus 208 ~~~~--------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~-----~g~~~~~C~~~~~~P~i~f~f-~g~~ 269 (329)
T 1dpj_A 208 AELE--------SHGAAIDTGTSLITLPSGLAEMINAEIGAKKG----W-----TGQYTLDCNTRDNLPDLIFNF-NGYN 269 (329)
T ss_dssp EECS--------SCEEEECTTCSCEEECHHHHHHHHHHHTCEEC----T-----TSSEEECGGGGGGCCCEEEEE-TTEE
T ss_pred ecCC--------CccEEeeCCCCcEECCHHHHHHHHHHhCCccC----C-----CCeEEEECCCCCcCCcEEEEE-CCEE
Confidence 7521 46799999999999999999999999865411 1 235555566556799999999 7899
Q ss_pred EEECCCceEEEeCCceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 380 LTVYPHEYLFQIREDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 380 ~~l~~~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+||+++|+++.. ..|+ +|...+.+.. ..+.||||++|||++|+
T Consensus 270 ~~i~~~~y~~~~~--~~C~~~~~~~~~~~~-~~~~~iLG~~fl~~~y~ 314 (329)
T 1dpj_A 270 FTIGPYDYTLEVS--GSCISAITPMDFPEP-VGPLAIVGDAFLRKYYS 314 (329)
T ss_dssp EEECTTTSEEEET--TEEEECEEECCCCTT-TCSEEEECHHHHTTEEE
T ss_pred EEECHHHhEecCC--CEEEEEEEecccCCC-CCCcEEEChHHhcceEE
Confidence 9999999999874 4798 7876543211 23689999999999997
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=8.1e-53 Score=406.18 Aligned_cols=284 Identities=24% Similarity=0.380 Sum_probs=234.7
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCC--CCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGC--SRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C--~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 155 (427)
+.++.|+++|.||||+|++.|++||||+++||+|..| ..|..+ +.|||++|+|++...
T Consensus 11 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------- 70 (323)
T 3cms_A 11 YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH-------QRFDPRKSSTFQNLG------------- 70 (323)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE-------------
T ss_pred ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC-------CCCCCccCCCeEECC-------------
Confidence 4678999999999999999999999999999999998 457543 689999999999875
Q ss_pred CCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC
Q 014294 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS 235 (427)
Q Consensus 156 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+... .....+||||||++..
T Consensus 71 ---------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 130 (323)
T 3cms_A 71 ---------KPLSIHYGTGS-MQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFF--TYAEFDGILGMAYPSL 130 (323)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHH--HHSSCSEEEECSCGGG
T ss_pred ---------cEEEEEeCCCC-eEEEEEEEEEEECCe--------EEeccEEEEEEecccccc--cccCCceEEecCcchh
Confidence 89999999998 799999999999864 345899999998754211 1245799999998653
Q ss_pred ------cHHHHHHhcCCCC-CceeeeccccCCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEeeCCC
Q 014294 236 ------SLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLPT 304 (427)
Q Consensus 236 ------s~~~~l~~~~~i~-~~Fs~~l~~~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 304 (427)
+++++|++++.++ ++||+||.+....|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+++.+..+
T Consensus 131 s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~- 208 (323)
T 3cms_A 131 ASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVACE- 208 (323)
T ss_dssp SCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEST-
T ss_pred hccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeecC-
Confidence 6899999999996 9999999986445999999999874 7899998 5689999999999999887532
Q ss_pred CCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEECC
Q 014294 305 SLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVYP 384 (427)
Q Consensus 305 ~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~ 384 (427)
....+||||||+++++|.+++++|.+++.+... .. ..|..+|...+.+|+|+|+| +|++|+||+
T Consensus 209 ------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~-----g~~~~~C~~~~~~P~i~f~f-~g~~~~i~~ 272 (323)
T 3cms_A 209 ------GGCQAILDTGTSKLVGPSSDILNIQQAIGATQN----QY-----GEFDIDCDNLSYMPTVVFEI-NGKMYPLTP 272 (323)
T ss_dssp ------TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE----TT-----TEEEECTTCTTTSCCEEEEE-TTEEEEECH
T ss_pred ------CCcEEEEecCCccEeCCHHHHHHHHHHhCCeec----CC-----CcEEEECCCCccCceEEEEE-CCEEEEECH
Confidence 246799999999999999999999999865321 11 12333344445799999999 899999999
Q ss_pred CceEEEeCCceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 385 HEYLFQIREDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 385 ~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
++|+++ ++..|+ +|...+ ..+.||||++|||++|+
T Consensus 273 ~~y~~~--~~~~C~~~i~~~~-----~~~~~iLG~~fl~~~y~ 308 (323)
T 3cms_A 273 SAYTSQ--DQGFCTSGFQSEN-----HSQKWILGDVFIREYYS 308 (323)
T ss_dssp HHHEEE--ETTEEEESEEEC--------CCEEECHHHHTTEEE
T ss_pred HHhccC--CCCEEEEEEEeCC-----CCCcEEECHHHhhceEE
Confidence 999998 345898 687654 13579999999999997
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.1e-52 Score=404.96 Aligned_cols=285 Identities=23% Similarity=0.399 Sum_probs=237.0
Q ss_pred CCCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 77 ~~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
++.+..|+++|.||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 67 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN-------HHRFDPRKSSTFRNLG------------ 67 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC-------CCCCCCCCCcCeEcCC------------
Confidence 456899999999999999999999999999999999997 4554 3799999999999975
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+... .....+||||||++.
T Consensus 68 ----------~~~~i~Yg~gs-~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 126 (320)
T 4aa9_A 68 ----------KPLSIHYGTGS-MEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVF--TYSEFDGILGLAYPS 126 (320)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHH--HSCCCSEEEECSCGG
T ss_pred ----------cEEEEEECCcE-EEEEEEEEEEEECCE--------eecCeEEEEEEEcccccc--cccCcccEEecCccc
Confidence 89999999999 799999999999874 345899999998765221 234579999999864
Q ss_pred ------CcHHHHHHhcCCCC-CceeeeccccCCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEeeCC
Q 014294 235 ------SSLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLP 303 (427)
Q Consensus 235 ------~s~~~~l~~~~~i~-~~Fs~~l~~~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 303 (427)
.+++++|+++|.|+ ++||+||.+...+|.|+||++|+++ +.|+|+. +..+|.|++++|+|+++.+..+
T Consensus 127 ~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~ 205 (320)
T 4aa9_A 127 LASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV 205 (320)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST
T ss_pred ccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC
Confidence 36899999999996 9999999985568999999999875 7899997 6789999999999999987643
Q ss_pred CCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEEC
Q 014294 304 TSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVY 383 (427)
Q Consensus 304 ~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 383 (427)
....++|||||++++||++++++|.+++.+... .. ..|.++|.....+|+|+|+| +|++|+||
T Consensus 206 -------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~-----g~~~~~C~~~~~~p~i~f~f-~g~~~~l~ 268 (320)
T 4aa9_A 206 -------GGCQAILDTGTSVLFGPSSDILKIQMAIGATEN----RY-----GEFDVNCGNLRSMPTVVFEI-NGRDYPLS 268 (320)
T ss_dssp -------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEEC----TT-----SCEEECGGGGGGCCCEEEEE-TTEEEEEC
T ss_pred -------CCcEEEEECCCCcEECCHHHHHHHHHHhCCccc----CC-----CcEEEeCCCCCcCceEEEEE-CCEEEEEC
Confidence 246799999999999999999999999865422 11 22334444445799999999 89999999
Q ss_pred CCceEEEeCCceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 384 PHEYLFQIREDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 384 ~~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+++|+.+. +..|+ +|.... ..+.||||++|||++|+
T Consensus 269 ~~~y~~~~--~~~C~~~i~~~~-----~~~~~ilG~~fl~~~y~ 305 (320)
T 4aa9_A 269 PSAYTSKD--QGFCTSGFQGDN-----NSELWILGDVFIREYYS 305 (320)
T ss_dssp HHHHEEEE--TTEEEESEEEET-----TCCCEEECHHHHTTEEE
T ss_pred HHHhccCC--CCeEEEEEEcCC-----CCCcEEEChHHhcceEE
Confidence 99999873 45798 677633 13579999999999997
No 9
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-52 Score=406.77 Aligned_cols=289 Identities=25% Similarity=0.402 Sum_probs=237.0
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 155 (427)
+.+..|+++|.||||+|++.|++||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 20 ~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------- 79 (351)
T 1tzs_A 20 YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH-------SRFQPSQSSTYSQPG------------- 79 (351)
T ss_dssp GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS-------CCBCGGGCTTCBCCS-------------
T ss_pred cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC-------CcCCcccCcceEECC-------------
Confidence 46789999999999999999999999999999999996 57643 789999999999854
Q ss_pred CCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC
Q 014294 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS 235 (427)
Q Consensus 156 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+... .....+||||||++..
T Consensus 80 ---------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 139 (351)
T 1tzs_A 80 ---------QSFSIQYGTGS-LSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTF--VDAEFDGILGLGYPSL 139 (351)
T ss_dssp ---------CEEEEESSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGG--GGCSCSEEEECSCGGG
T ss_pred ---------CEEEEEeCCCC-eEEEEEEeEEEECCe--------EECCeEEEEEEecccccc--ccCCCceEEecCCccc
Confidence 89999999998 799999999999864 345899999998755321 2356799999999754
Q ss_pred ------cHHHHHHhcCCCC-CceeeeccccC---CcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCEEee
Q 014294 236 ------SLLSQLAAAGNVR-KEFAHCLDVVK---GGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLD 301 (427)
Q Consensus 236 ------s~~~~l~~~~~i~-~~Fs~~l~~~~---~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~ 301 (427)
+++++|+++|.++ ++||+||.+.. .+|.|+||++|++ .+.|+|+. ...+|.|.+++|+||++.+.
T Consensus 140 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~ 218 (351)
T 1tzs_A 140 AVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALDNIQVGGTVMF 218 (351)
T ss_dssp SGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEEEEEETTEEEE
T ss_pred cccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeCEEEECCceEE
Confidence 5899999999996 99999998852 2799999999975 48999998 56899999999999998754
Q ss_pred CCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEE
Q 014294 302 LPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLT 381 (427)
Q Consensus 302 ~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~ 381 (427)
. .....+||||||+++++|.+++++|.+++.+.... ..+.++|+ ....+|+|+|+| +|++|+
T Consensus 219 ~-------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----g~~~~~C~-----~~~~~P~i~f~f-~g~~~~ 280 (351)
T 1tzs_A 219 C-------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVD-----GEYAVECA-----NLNVMPDVTFTI-NGVPYT 280 (351)
T ss_dssp C-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS-----SSEEECGG-----GGGGSCCEEEEE-TTEEEE
T ss_pred c-------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcccC-----CeEEEeCC-----CCccCCcEEEEE-CCEEEE
Confidence 2 22467999999999999999999999998654321 22224664 335689999999 899999
Q ss_pred ECCCceEEEeCC--ceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 382 VYPHEYLFQIRE--DVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 382 l~~~~y~~~~~~--~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
||+++|+++... +..|+ +|...+.+.. ..+.||||++|||++||
T Consensus 281 i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~-~~~~~iLG~~fl~~~y~ 327 (351)
T 1tzs_A 281 LSPTAYTLLDFVDGMQFCSSGFQGLDIHPP-AGPLWILGDVFIRQFYS 327 (351)
T ss_dssp ECTTTSEECC-----CCEEESEEECCCCTT-TCSCEEECHHHHHHEEE
T ss_pred ECHHHhEeeccCCCCCeEEEEEEECCCCCC-CCCeEEEChHHhhheEE
Confidence 999999997542 35798 6877653221 24579999999999997
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-52 Score=404.20 Aligned_cols=286 Identities=22% Similarity=0.416 Sum_probs=237.5
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 155 (427)
+.++.|+++|.||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------- 68 (324)
T 1am5_A 9 EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH-------NKFKPRQSSTYVETG------------- 68 (324)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS-------CCBCGGGCTTCEEEE-------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC-------CcCCCccCCCeEeCC-------------
Confidence 46789999999999999999999999999999999986 46543 689999999999865
Q ss_pred CCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC
Q 014294 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS 235 (427)
Q Consensus 156 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+.+. .....+||||||++..
T Consensus 69 ---------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (324)
T 1am5_A 69 ---------KTVDLTYGTGG-MRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQ--AAAPFDGILGLAYPSI 128 (324)
T ss_dssp ---------EEEEEECSSCE-EEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTT--TTCSSSEEEECSCGGG
T ss_pred ---------cEEEEEECCCC-eEEEEEECceeECCc--------EEcccEEEEEEecccccc--cCCCCceEEecCCccc
Confidence 89999999998 599999999999864 445899999998765432 3456899999999754
Q ss_pred ------cHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCEEeeCC
Q 014294 236 ------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLP 303 (427)
Q Consensus 236 ------s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 303 (427)
+++++|+++|.++ ++||+||.+. ..+|.|+||++|++ .+.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~- 206 (324)
T 1am5_A 129 AAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC- 206 (324)
T ss_dssp CGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC-
T ss_pred cccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec-
Confidence 5899999999996 9999999875 35899999999975 48999998 567999999999999987531
Q ss_pred CCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEEC
Q 014294 304 TSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVY 383 (427)
Q Consensus 304 ~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 383 (427)
. ...+||||||++++||++++++|.+++.+. . ....+..+| ...+.+|+|+|+| +|++|+||
T Consensus 207 ------~-~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~----~~g~~~~~C-----~~~~~~P~i~f~f-~g~~~~i~ 268 (324)
T 1am5_A 207 ------E-GCQAIVDTGTSKIVAPVSALANIMKDIGAS-E----NQGEMMGNC-----ASVQSLPDITFTI-NGVKQPLP 268 (324)
T ss_dssp ------C-CEEEEECTTCSSEEECTTTHHHHHHHHTCE-E----CCCCEECCT-----TSSSSSCCEEEEE-TTEEEEEC
T ss_pred ------c-CceEEEecCCccEECCHHHHHHHHHHhCCc-c----cCCcEEEeC-----CCcccCCcEEEEE-CCEEEEEC
Confidence 1 267999999999999999999999998755 1 111222456 4445799999999 89999999
Q ss_pred CCceEEEeCCceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 384 PHEYLFQIREDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 384 ~~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+++|+++. +..|+ +|...+.+.. ..+.||||+.|||++||
T Consensus 269 ~~~y~~~~--~~~C~~~~~~~~~~~~-~~~~~ilG~~fl~~~y~ 309 (324)
T 1am5_A 269 PSAYIEGD--QAFCTSGLGSSGVPSN-TSELWIFGDVFLRNYYT 309 (324)
T ss_dssp HHHHEEES--SSCEEECEEECCSCCS-SSCEEEECHHHHHHEEE
T ss_pred HHHhcccC--CCeEEEEEEECccCCC-CCCcEEEChHHhccEEE
Confidence 99999986 55798 7877653221 24589999999999996
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=6.8e-52 Score=400.81 Aligned_cols=289 Identities=24% Similarity=0.443 Sum_probs=237.6
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 155 (427)
..++.|+++|.||||+|++.|++||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------- 68 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH-------SRFNPSESSTYSTNG------------- 68 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE-------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC-------CcCCCccCCCeEECC-------------
Confidence 46789999999999999999999999999999999996 37543 689999999999865
Q ss_pred CCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC
Q 014294 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS 235 (427)
Q Consensus 156 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 235 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+.+. .....+||||||++..
T Consensus 69 ---------~~~~i~Yg~gs-~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 69 ---------QTFSLQYGSGS-LTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNF--VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGG--GGCSCCEEEECCCCSC
T ss_pred ---------cEEEEEeCCCC-eEEEEEeeeEEEcce--------EECceEEEEEEEcccccc--ccCCCceEEecCCCcc
Confidence 89999999998 599999999999864 345899999998755321 2356799999999764
Q ss_pred ------cHHHHHHhcCCCC-CceeeeccccC-C-cceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEeeC
Q 014294 236 ------SLLSQLAAAGNVR-KEFAHCLDVVK-G-GGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDL 302 (427)
Q Consensus 236 ------s~~~~l~~~~~i~-~~Fs~~l~~~~-~-~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~ 302 (427)
+++++|++++.++ ++||+||.+.. . +|.|+||++|+++ +.|+|+. .+.+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 5899999999996 99999998753 2 7999999999874 7899998 568999999999999987541
Q ss_pred CCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEE
Q 014294 303 PTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTV 382 (427)
Q Consensus 303 ~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l 382 (427)
......+||||||++++||++++++|.+++.+.... ...+..+|+ ..+.+|+|+|+| +|++|+|
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~----~g~~~~~C~-----~~~~~P~i~f~f-~g~~~~i 271 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDE----YGQFLVNCN-----SIQNLPSLTFII-NGVEFPL 271 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEECT----TSCEEECGG-----GGGGSCCEEEEE-TTEEEEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeecC----CCeEEEeCC-----CcccCCcEEEEE-CCEEEEE
Confidence 122467999999999999999999999998754321 112224664 334789999999 8999999
Q ss_pred CCCceEEEeCCceEEE-EEEeCCCCCCCCCC-eEEEcccccccccC
Q 014294 383 YPHEYLFQIREDVWCI-GWQNGGLQNHDGRQ-MILLGGTVYSCFML 426 (427)
Q Consensus 383 ~~~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~-~~ilG~~fLr~~yv 426 (427)
|+++|+++.. + .|+ +|...+.+... .+ .||||++|||++||
T Consensus 272 ~~~~y~~~~~-g-~C~~~~~~~~~~~~~-~~~~~iLG~~fl~~~yv 314 (329)
T 1htr_B 272 PPSSYILSNN-G-YCTVGVEPTYLSSQN-GQPLWILGDVFLRSYYS 314 (329)
T ss_dssp CHHHHEEECS-S-CEEESEEEECCCCTT-SSCEEEECHHHHTTEEE
T ss_pred CHHHhcccCC-C-EEEEEEEECCCCCCC-CCceEEEChHHhccEEE
Confidence 9999999875 3 898 78765432211 24 89999999999996
No 12
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=6.4e-52 Score=401.76 Aligned_cols=280 Identities=21% Similarity=0.345 Sum_probs=232.5
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCCCCCC--CCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA--GCSRCPT--KSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~--~C~~C~~--~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
.+..|+++|.||||+|++.|+|||||+++||+|. +|..|.. ....|..++.|||++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------------ 77 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC------------
Confidence 3689999999999999999999999999999976 6765421 11234456899999999999875
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (427)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 78 ----------QDFSIEYGDLTSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ----------EEEEEEBTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CceEEEECCCCEEEEEEEEEEEEECCE--------EEccEEEEEEEecC---------CCccEEEEcCCc
Confidence 899999999998899999999999864 34589999999752 368999999975
Q ss_pred C--------cHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEe
Q 014294 235 S--------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPL 300 (427)
Q Consensus 235 ~--------s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 300 (427)
. +++.+|++||.++ ++||+||.+. ..+|.|+||++|+++ +.|+|+. ...+|.|.+++|+||++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 4 7999999999996 9999999874 568999999999886 7899998 5569999999999999887
Q ss_pred eCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCC-CceeeecCCCCccCceEEEEecCCcE
Q 014294 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQ-FSCFQFSKNVDDAFPTVTFKFKGSLS 379 (427)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~P~i~f~f~gg~~ 379 (427)
.. ...+||||||++++||++++++|.+++.+... .....+. .+| ..+|+|+|+|.+|++
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C--------~~~p~i~f~f~~g~~ 269 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSC--------DLSGDAVFNFDQGVK 269 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSS--------CCCSEEEEEESTTCE
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcC--------CCCCceEEEEcCCcE
Confidence 53 24599999999999999999999999976542 1111222 566 248999999977899
Q ss_pred EEECCCceEEEeCCceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 380 LTVYPHEYLFQIREDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 380 ~~l~~~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+||+++|+++..++..|+ +|... +.||||+.|||++|+
T Consensus 270 ~~i~~~~y~~~~~~~~~C~~~i~~~--------~~~iLG~~fl~~~y~ 309 (334)
T 1j71_A 270 ITVPLSELILKDSDSSICYFGISRN--------DANILGDNFLRRAYI 309 (334)
T ss_dssp EEEEGGGGEEECSSSSCEEESEEEC--------TTCEECHHHHTTEEE
T ss_pred EEECHHHheeecCCCCeeEEEEeEC--------CCcEEChHhhccEEE
Confidence 9999999999876555698 55543 249999999999997
No 13
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=5.5e-52 Score=418.26 Aligned_cols=300 Identities=24% Similarity=0.389 Sum_probs=236.5
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS---RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
+.++.|+++|.||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 49 ~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~~------------ 109 (478)
T 1qdm_A 49 YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL-------HSRYKAGASSTYKKNG------------ 109 (478)
T ss_dssp GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG-------SCCBCGGGCTTCBCCC------------
T ss_pred ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC-------CCCCCcccCCCeeeCC------------
Confidence 46789999999999999999999999999999999885 4654 4789999999998854
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+..+ ....++||||||++.
T Consensus 110 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f--~~~~~dGIlGLg~~~ 168 (478)
T 1qdm_A 110 ----------KPAAIQYGTGS-IAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITF--LVAKFDGILGLGFKE 168 (478)
T ss_dssp ----------CEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHH--HHCSSSEEEECSCGG
T ss_pred ----------cEEEEEcCCCC-eEEEEEEEEEEECCe--------EECCEEEEEEEecCCccc--ccccccceecccccc
Confidence 79999999998 799999999999864 345899999998654311 234579999999976
Q ss_pred C------cHHHHHHhcCCCC-Cceeeecccc---CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEe
Q 014294 235 S------SLLSQLAAAGNVR-KEFAHCLDVV---KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPL 300 (427)
Q Consensus 235 ~------s~~~~l~~~~~i~-~~Fs~~l~~~---~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 300 (427)
. +++.+|.+||+++ ++||+||.+. ..+|.|+||++|+++ +.|+|+. ...+|.|.+++|+||++.+
T Consensus 169 ~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~l~~i~v~g~~~ 247 (478)
T 1qdm_A 169 ISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFDMGDVLVGGKST 247 (478)
T ss_dssp GCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEEECCEEETTEEC
T ss_pred cccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEEEeEEEECCEEE
Confidence 5 4688999999997 9999999874 357999999999875 7899997 5689999999999999887
Q ss_pred eCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCC----------------------CCcc-----------
Q 014294 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQP----------------------GLKM----------- 347 (427)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~----------------------~~~~----------- 347 (427)
.++. ....+||||||+++++|.+++++|.+++.+... ....
T Consensus 248 ~~~~------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~ 321 (478)
T 1qdm_A 248 GFCA------GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCT 321 (478)
T ss_dssp STTT------TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-
T ss_pred eecC------CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccc
Confidence 5432 256799999999999999999999998864310 0000
Q ss_pred -----------cccCC------------------------------------------CCcee---------eecCCCCc
Q 014294 348 -----------HTVEE------------------------------------------QFSCF---------QFSKNVDD 365 (427)
Q Consensus 348 -----------~~~~~------------------------------------------~~~C~---------~~~~~~~~ 365 (427)
..+.+ ...|+ .++|+...
T Consensus 322 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~ 401 (478)
T 1qdm_A 322 FDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLG 401 (478)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGT
T ss_pred cCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeeccccc
Confidence 00000 01122 22334445
Q ss_pred cCceEEEEecCCcEEEECCCceEEEeCC--ceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 366 AFPTVTFKFKGSLSLTVYPHEYLFQIRE--DVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 366 ~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
.+|+|+|+| +|+.|+|+|++|+++..+ +..|+ +|...+.+... .+.||||++|||++|+
T Consensus 402 ~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~-~~~~ILGd~fl~~~y~ 463 (478)
T 1qdm_A 402 SMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPR-GPLWILGDVFMGPYHT 463 (478)
T ss_dssp TCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTS-CSEEEECHHHHTTEEE
T ss_pred ccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCC-CCcEEECHHHhccEEE
Confidence 799999999 899999999999998754 35898 57766543222 3689999999999997
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.1e-52 Score=403.02 Aligned_cols=288 Identities=25% Similarity=0.395 Sum_probs=231.2
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYP 157 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~ 157 (427)
..++.|+++|.||||+|++.|+|||||+++||+|..|..|..+ .++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~-----~~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT-----GHAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC-----CCCcCCcccCcCceEcC---------------
Confidence 4678999999999999999999999999999999999876432 23799999999999864
Q ss_pred CCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC--
Q 014294 158 SCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS-- 235 (427)
Q Consensus 158 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 235 (427)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+. .....+||||||++..
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFV--QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCE--------EEcceEEEEEEecCcccc--ccCCCceeEEeCcccccc
Confidence 2799999999998899999999999864 345899999998755432 1246799999998643
Q ss_pred -------cHHHHHHhcCCCCCceeeeccccCCcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCEEeeCCC
Q 014294 236 -------SLLSQLAAAGNVRKEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLPT 304 (427)
Q Consensus 236 -------s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 304 (427)
+++++|+++ +.+++||+||.+ +.+|.|+||++|++ ++.|+|+..+..+|.|++++|+||++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~-i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS-LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN--- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT-SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC---
T ss_pred cCCCCCCCHHHHHHHh-cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc---
Confidence 488999886 334999999987 56899999999975 48899998667899999999999997653
Q ss_pred CCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEECC
Q 014294 305 SLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVYP 384 (427)
Q Consensus 305 ~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~ 384 (427)
.....+||||||++++||++++++|.+++.+... ......+.++| . ..+|+|+|+| +|++|+||+
T Consensus 211 -----~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~--~~~~~~~~~~C-----~--~~~P~i~f~f-~g~~~~ip~ 275 (329)
T 3c9x_A 211 -----RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQY--DNQQEGVVFDC-----D--EDLPSFSFGV-GSSTITIPG 275 (329)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEE--ETTTTEEEEET-----T--CCCCCEEEEE-TTEEEEECG
T ss_pred -----CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEE--cCCCCEEEEEC-----C--CCCCcEEEEE-CCEEEEECH
Confidence 1246799999999999999999999887643211 01111122456 3 4689999999 799999999
Q ss_pred CceEEEeCC--ceEEEE-EEeCCCCCCCCCCeEEEcccccccccC
Q 014294 385 HEYLFQIRE--DVWCIG-WQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 385 ~~y~~~~~~--~~~Cl~-i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
++|++...+ ...|++ |.... +.+.||||+.|||++||
T Consensus 276 ~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~ILG~~fl~~~y~ 315 (329)
T 3c9x_A 276 DLLNLTPLEEGSSTCFGGLQSSS-----GIGINIFGDVALKAALV 315 (329)
T ss_dssp GGGEEEESSTTCSEEEESEEECT-----TTTSEEECHHHHTTEEE
T ss_pred HHeeeeccCCCCCeEEEEEEcCC-----CCCcEEEChHHhccEEE
Confidence 999987632 368985 66543 24579999999999997
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.8e-51 Score=402.87 Aligned_cols=288 Identities=23% Similarity=0.391 Sum_probs=237.9
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS---RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
..++.|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 15 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~~------------ 75 (361)
T 1mpp_A 15 FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKETD------------ 75 (361)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEEEE------------
T ss_pred CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEecC------------
Confidence 46789999999999999999999999999999999997 68654 689999999999875
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccC-----CCCCCCCCCcceeee
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSG-----DLGSSTDAAVDGILG 229 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~-----~~~~~~~~~~~GIlG 229 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ .+. .....+||||
T Consensus 76 ----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~--~~~~~~GilG 134 (361)
T 1mpp_A 76 ----------YNLNITYGTGG-ANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPD--SELFLDGIFG 134 (361)
T ss_dssp ----------EEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTT--CSSCCCEEEE
T ss_pred ----------CeEEEEECCce-EEEEEEEEEEEECCE--------EEeceEEEEEEeccCcccccccc--ccCCCCCEEE
Confidence 89999999999 799999999999864 345899999998765 321 3456899999
Q ss_pred cCCCC------------CcHHHHHHhcCCCC-CceeeeccccCCcceEEeCCcCCC----CceeecCCCCCC---cceEE
Q 014294 230 FGQAN------------SSLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMP---HYNVI 289 (427)
Q Consensus 230 Lg~~~------------~s~~~~l~~~~~i~-~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~---~~~v~ 289 (427)
||++. .+++++|+++|.++ ++||+||.+...+|.|+||++|++ .+.|+|++.... +|.|.
T Consensus 135 Lg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~ 214 (361)
T 1mpp_A 135 AAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAP 214 (361)
T ss_dssp CSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEE
T ss_pred eCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEE
Confidence 99864 45788999999996 999999997545899999999975 489999985443 89999
Q ss_pred EEEEEECCEEeeCCCCCcccCCCCcEE-EeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccC-
Q 014294 290 LEEVEVGGNPLDLPTSLLGTGDERGTI-IDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAF- 367 (427)
Q Consensus 290 l~~i~v~~~~~~~~~~~~~~~~~~~~i-iDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~- 367 (427)
|++|+|+++.+..+ ....+| |||||++++||.+++++|.+++.+... .....+.++|+. ...+
T Consensus 215 l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~g~~~~~C~~-----~~~~~ 279 (361)
T 1mpp_A 215 VTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ESQQGYTVPCSK-----YQDSK 279 (361)
T ss_dssp EEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EETTEEEEEHHH-----HTTCC
T ss_pred EeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CCCCcEEEECCC-----cccCC
Confidence 99999999876421 135699 999999999999999999999876432 112222346742 2456
Q ss_pred ceEEEEec-C-----CcEEEECCCceEEEeC-CceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 368 PTVTFKFK-G-----SLSLTVYPHEYLFQIR-EDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 368 P~i~f~f~-g-----g~~~~l~~~~y~~~~~-~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+|+|+|. + |++|+||+++|+++.. ++..|+ +|.... .+.||||++|||++||
T Consensus 280 p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~------~~~~iLG~~fl~~~yv 340 (361)
T 1mpp_A 280 TTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG------GNQFIVGNLFLRFFVN 340 (361)
T ss_dssp CEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES------SSCCEEEHHHHTTEEE
T ss_pred CcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC------CCCEEEChHHhccEEE
Confidence 99999994 4 8999999999999875 346898 887652 3579999999999997
No 16
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.9e-52 Score=402.34 Aligned_cols=286 Identities=23% Similarity=0.377 Sum_probs=230.5
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 158 (427)
.++.|+++|.||||+|++.|++||||+++||+|..|..|.. .++.|||++|+|++.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 57899999999999999999999999999999999987642 24799999999999864
Q ss_pred CCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 014294 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (427)
Q Consensus 159 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 235 (427)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+. .....+||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFT--EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCcccc--ccCCCceEEEecccccccc
Confidence 2899999999998899999999999864 345899999998755432 1245799999998643
Q ss_pred ------cHHHHHHhcCCCCCceeeeccccCCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEeeCCCC
Q 014294 236 ------SLLSQLAAAGNVRKEFAHCLDVVKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLPTS 305 (427)
Q Consensus 236 ------s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 305 (427)
+++++|+++ +-+++||+||.+ +.+|.|+||++|+++ +.|+|++.+..+|.|++++|+||++.+..
T Consensus 136 ~~~~~~~~~~~l~~~-i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~--- 210 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS-LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKS--- 210 (329)
T ss_dssp BSSCCCCHHHHHTTT-SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEE---
T ss_pred CcCCCCCHHHHHHHh-ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccC---
Confidence 488999886 324999999987 568999999999764 88999986678999999999999976531
Q ss_pred CcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEECCC
Q 014294 306 LLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVYPH 385 (427)
Q Consensus 306 ~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 385 (427)
....+||||||++++||++++++|.+++.+... ......+.++| . ..+|+|+|+| +|++|+||++
T Consensus 211 -----~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~--~~~~g~~~~~C-----~--~~~P~i~f~f-gg~~~~ip~~ 275 (329)
T 1oew_A 211 -----TSIDGIADTGTTLLYLPATVVSAYWAQVSGAKS--SSSVGGYVFPC-----S--ATLPSFTFGV-GSARIVIPGD 275 (329)
T ss_dssp -----EEEEEEECTTCCSEEECHHHHHHHHTTSTTCEE--ETTTTEEEEET-----T--CCCCCEEEEE-TTEEEEECHH
T ss_pred -----CCceEEEeCCCCCEECCHHHHHHHHHhCCCcEE--cCCCCEEEEEC-----C--CCCCcEEEEE-CCEEEEECHH
Confidence 135699999999999999999999887733211 01111122456 3 3689999999 8999999999
Q ss_pred ceEEEeC--CceEEEE-EEeCCCCCCCCCCeEEEcccccccccC
Q 014294 386 EYLFQIR--EDVWCIG-WQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 386 ~y~~~~~--~~~~Cl~-i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+|+++.. +...|++ |.... +.+.||||+.|||++|+
T Consensus 276 ~~~~~~~~~~~~~C~~~i~~~~-----~~~~~iLG~~fl~~~y~ 314 (329)
T 1oew_A 276 YIDFGPISTGSSSCFGGIQSSA-----GIGINIFGDVALKAAFV 314 (329)
T ss_dssp HHEEEESSTTCSEEEESEEEST-----TTSSEEECHHHHTTEEE
T ss_pred HeeeeecCCCCCeEEEEEEeCC-----CCCceEEChHHhcCEEE
Confidence 9998753 2468985 66543 24679999999999997
No 17
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.2e-51 Score=401.30 Aligned_cols=287 Identities=21% Similarity=0.382 Sum_probs=238.3
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS----RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 153 (427)
+.+..|+++|.||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 15 ~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~-------~~~y~~~~SsT~~~~~----------- 76 (341)
T 3k1w_A 15 YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-------HKLFDASDSSSYKHNG----------- 76 (341)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHT-------SCCBCGGGCTTCEEEE-----------
T ss_pred ccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccC-------CCCCCCCcCcCeeECC-----------
Confidence 45789999999999999999999999999999999987 4543 4799999999999865
Q ss_pred CCCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCC-CCCCCCCCcceeeecCC
Q 014294 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGD-LGSSTDAAVDGILGFGQ 232 (427)
Q Consensus 154 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~-~~~~~~~~~~GIlGLg~ 232 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .+ ++.|||++...+. + .....+||||||+
T Consensus 77 -----------~~~~i~Yg~gs-~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~---~~~~~~GilGLg~ 132 (341)
T 3k1w_A 77 -----------TELTLRYSTGT-VSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPF---MLAEFDGVVGMGF 132 (341)
T ss_dssp -----------EEEEEEETTEE-EEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHH---TTCSSSEEEECSC
T ss_pred -----------CEEEEEECCcE-EEEEEEEEEEEECCc--------ee-eEEEEEEEEcccccc---ccCCcceEEECCc
Confidence 89999999998 899999999999864 34 7999999987653 3 2356799999999
Q ss_pred CCC------cHHHHHHhcCCCC-CceeeeccccC-----CcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEEC
Q 014294 233 ANS------SLLSQLAAAGNVR-KEFAHCLDVVK-----GGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVG 296 (427)
Q Consensus 233 ~~~------s~~~~l~~~~~i~-~~Fs~~l~~~~-----~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~ 296 (427)
+.. +++++|++||.|+ ++||+||.+.. .+|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+
T Consensus 133 ~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~ 211 (341)
T 3k1w_A 133 IEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVG 211 (341)
T ss_dssp GGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEET
T ss_pred hhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEEC
Confidence 765 4899999999997 99999998752 37999999999875 7899998 678999999999999
Q ss_pred CEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecC
Q 014294 297 GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKG 376 (427)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g 376 (427)
++.+..+ ....+||||||++++||.+++++|.+++.+.... .+ |.++|.....+|+|+|+| +
T Consensus 212 ~~~~~~~-------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~----~g------~~~~C~~~~~~p~i~f~f-~ 273 (341)
T 3k1w_A 212 SSTLLCE-------DGCLALVDTGASYISGSTSSIEKLMEALGAKKRL----FD------YVVKCNEGPTLPDISFHL-G 273 (341)
T ss_dssp TEEEECT-------TCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS----SC------EEEEGGGGGGCCCEEEEE-T
T ss_pred CEEeecC-------CCCEEEEECCCChhcCCHHHHHHHHHHcCCeecC----CC------eEEeCCCCCcCCcEEEEE-C
Confidence 9875432 2467999999999999999999999998755321 11 344445445789999999 8
Q ss_pred CcEEEECCCceEEEeC--CceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 377 SLSLTVYPHEYLFQIR--EDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 377 g~~~~l~~~~y~~~~~--~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|++|+||+++|+++.. ++..|+ +|...+.+.. ..+.||||++|||++|+
T Consensus 274 g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~-~~~~~iLG~~fl~~~y~ 325 (341)
T 3k1w_A 274 GKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPP-TGPTWALGATFIRKFYT 325 (341)
T ss_dssp TEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTT-TCSCEEECHHHHTTEEE
T ss_pred CEEEEECHHHheeEccCCCCCeEEeEEEecccCCC-CCCeEEEChHHhcceEE
Confidence 9999999999998754 257898 6877543222 23579999999999996
No 18
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.6e-51 Score=400.30 Aligned_cols=283 Identities=23% Similarity=0.340 Sum_probs=230.8
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCCCCCC--CCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA--GCSRCPT--KSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~--~C~~C~~--~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
.++.|+++|.||||+|++.|+|||||+++||++. +|..|.. ....|..++.|||++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN------------ 77 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC------------
Confidence 4689999999999999999999999999999976 6765432 12235556899999999999875
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (427)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||+..
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 78 ----------TRFDIKYGDGSYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ----------CcEEEEeCCCCeEEEEEEEEEEEECCE--------EecceEEEEEEecC---------CCcCEEEEcccc
Confidence 899999999998899999999999864 34589999999753 368999999975
Q ss_pred C--------cHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEe
Q 014294 235 S--------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPL 300 (427)
Q Consensus 235 ~--------s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 300 (427)
. +++.+|++||.++ ++||+||.+. ..+|.|+||++|+++ +.|+|++ ...+|.|.+++|+||++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEecc-CCceEEEEEeEEEECCEec
Confidence 3 7999999999996 9999999875 567999999999764 8899998 5569999999999999887
Q ss_pred eCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEE
Q 014294 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSL 380 (427)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~ 380 (427)
.. ...+||||||++++||++++++|.+++.+......... ..|.++| ..+|+|+|+|.+|++|
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~C---~~~p~i~f~f~~g~~~ 272 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGN-----KVYVADC---KTSGTIDFQFGNNLKI 272 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSC-----EEEEECT---TCCCEEEEEETTTEEE
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCC-----cEEEEEC---CCCCcEEEEECCCcEE
Confidence 53 24599999999999999999999999976542101011 1233333 2489999999778999
Q ss_pred EECCCceEEEeC-----CceEEEE-EEeCCCCCCCCCCeEEEcccccccccC
Q 014294 381 TVYPHEYLFQIR-----EDVWCIG-WQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 381 ~l~~~~y~~~~~-----~~~~Cl~-i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+||+++|+++.. ++..|++ |... +.||||++|||++|+
T Consensus 273 ~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--------~~~iLG~~fl~~~y~ 316 (342)
T 2qzx_A 273 SVPVSEFLFQTYYTSGKPFPKCEVRIRES--------EDNILGDNFLRSAYV 316 (342)
T ss_dssp EEEGGGGEECCBCTTSCBCSSEEESEEEC--------SSCEECHHHHTTEEE
T ss_pred EEcHHHhcccccccCCCCCCccEEEEecC--------CCcEeChHhhhcEEE
Confidence 999999999742 2357984 5543 249999999999997
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.4e-51 Score=400.44 Aligned_cols=280 Identities=22% Similarity=0.380 Sum_probs=233.9
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 155 (427)
..++.|+++|.||||+|++.|++||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 59 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------- 118 (375)
T 1miq_A 59 VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-------KNLYDSSKSKSYEKDG------------- 118 (375)
T ss_dssp TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-------SCCBCGGGCTTCEEEE-------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-------CCcCCCccCCceEECC-------------
Confidence 46789999999999999999999999999999999985 5654 3799999999999865
Q ss_pred CCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeec----ccCCCCCCCCCCcceeeecC
Q 014294 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNR----QSGDLGSSTDAAVDGILGFG 231 (427)
Q Consensus 156 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~~GIlGLg 231 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .+++ .|||++. +. .| .....+||||||
T Consensus 119 ---------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f---~~~~~dGilGLg 175 (375)
T 1miq_A 119 ---------TKVDITYGSGT-VKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IY---SSVEFDGILGLG 175 (375)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HH---HHSCCCEEEECS
T ss_pred ---------cEEEEEeCCCe-EEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-cc---ccCCCceEEeCC
Confidence 89999999999 799999999999864 3457 9999998 44 33 234679999999
Q ss_pred CCCC------cHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEE
Q 014294 232 QANS------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNP 299 (427)
Q Consensus 232 ~~~~------s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~ 299 (427)
++.. +++++|++||.++ ++||+||.+. ..+|.|+||++|+++ +.|+|+. ...+|.|.++ |+||++.
T Consensus 176 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~~ 253 (375)
T 1miq_A 176 WKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQT 253 (375)
T ss_dssp SCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTEE
T ss_pred CCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCEE
Confidence 9754 5899999999996 9999999975 358999999999764 7899997 5789999999 9999987
Q ss_pred eeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcE
Q 014294 300 LDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLS 379 (427)
Q Consensus 300 ~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~ 379 (427)
+ ....+||||||+++++|.+++++|.+++.+... .....+..+|+ . ..+|+|+|+| +|++
T Consensus 254 ~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~---~~~g~~~~~C~-----~-~~~P~i~f~f-~g~~ 313 (375)
T 1miq_A 254 M----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV---PFLPFYVTTCD-----N-KEMPTLEFKS-ANNT 313 (375)
T ss_dssp E----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC---TTSSCEEEETT-----C-TTCCCEEEEC-SSCE
T ss_pred c----------ccceEEecCCCccEEcCHHHHHHHHHHhCCccc---CCCCeEEEECC-----C-CCCCcEEEEE-CCEE
Confidence 6 146699999999999999999999999976432 11122224563 3 5699999999 8999
Q ss_pred EEECCCceEEEeC--CceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 380 LTVYPHEYLFQIR--EDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 380 ~~l~~~~y~~~~~--~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+||+++|+++.. ++..|+ +|...+. ..+.||||++|||++||
T Consensus 314 ~~l~~~~yi~~~~~~g~~~C~~~~~~~~~----~~~~~ILG~~fl~~~yv 359 (375)
T 1miq_A 314 YTLEPEYYMNPILEVDDTLCMITMLPVDI----DSNTFILGDPFMRKYFT 359 (375)
T ss_dssp EEECGGGSEEESSSSSCSEEEESEEECCS----SSSEEEECHHHHHHEEE
T ss_pred EEECHHHhEeeccCCCCCeEEEEEEECCC----CCCcEEECHHHhccEEE
Confidence 9999999999875 345898 8887652 12689999999999996
No 20
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.2e-50 Score=399.52 Aligned_cols=313 Identities=20% Similarity=0.359 Sum_probs=236.4
Q ss_pred CCCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCC
Q 014294 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRY 156 (427)
Q Consensus 77 ~~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~ 156 (427)
+..+.+|+++|.|||| |+|||||+++||+|.+|. +++.++|+++.|........
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 3567999999999997 999999999999987541 24556676666654322222
Q ss_pred CCCC--------CCCcc-eeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCce----eeEEeeecccCCCCCCCCCC
Q 014294 157 PSCS--------PGVRC-EYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSS----VIFGCGNRQSGDLGSSTDAA 223 (427)
Q Consensus 157 ~~c~--------~~~~~-~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~----~~fG~~~~~~~~~~~~~~~~ 223 (427)
..|. .++.| .|.++|++|+.+.|.+++|+|+|++.++.. .+++ +.|||+..+.... ....
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~----~v~~~~~~~~Fg~~~~~~~~~---~~~~ 136 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSK----PVSKVNVGVLAACAPSKLLAS---LPRG 136 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSS----EEEEEEEEEEEEECCGGGGTT---SCTT
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCc----cccceeeeeEeecCcccccCC---CCCC
Confidence 2443 12457 599999999978999999999998754321 2223 4689998763211 1246
Q ss_pred cceeeecCCCCCcHHHHHHhcCCCCCceeeeccccCCcceEEeCCcCC------CCceeecCCCC--CCcceEEEEEEEE
Q 014294 224 VDGILGFGQANSSLLSQLAAAGNVRKEFAHCLDVVKGGGIFAIGDVVS------PKVKTTPMVPN--MPHYNVILEEVEV 295 (427)
Q Consensus 224 ~~GIlGLg~~~~s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~~Gg~d~------~~~~~~p~~~~--~~~~~v~l~~i~v 295 (427)
.|||||||++.++++.||.++++++++||+||.+. .+|.|+||++|. .++.|+|++.+ ..+|+|+|++|+|
T Consensus 137 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~v 215 (381)
T 1t6e_X 137 STGVAGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVV 215 (381)
T ss_dssp EEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEE
T ss_pred CceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEE
Confidence 89999999999999999999987779999999874 789999999875 35899999854 3578899999999
Q ss_pred CCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCC-------CCcc--cccCCCCceeeecCCC---
Q 014294 296 GGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQP-------GLKM--HTVEEQFSCFQFSKNV--- 363 (427)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~-------~~~~--~~~~~~~~C~~~~~~~--- 363 (427)
|++.+.++...|. .+++||||||++++||+++|++|.+++.+... .... ........||..++..
T Consensus 216 g~~~~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~ 292 (381)
T 1t6e_X 216 GDTRVPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNL 292 (381)
T ss_dssp TTEECCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEET
T ss_pred cCEEecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccc
Confidence 9999877765553 46799999999999999999999999987542 1111 1112336899876432
Q ss_pred -CccCceEEEEecCCcEEEECCCceEEEeCCceEEEEEEeCCCCC--CCCCCeEEEcccccccccC
Q 014294 364 -DDAFPTVTFKFKGSLSLTVYPHEYLFQIREDVWCIGWQNGGLQN--HDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 364 -~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~i~~~~~~~--~~~~~~~ilG~~fLr~~yv 426 (427)
...+|+|+|+|+||++|+||+++|+++..++..|++|...+... ....+.||||+.|||++||
T Consensus 293 ~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yv 358 (381)
T 1t6e_X 293 GGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVL 358 (381)
T ss_dssp TEECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEE
T ss_pred cCCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEE
Confidence 13689999999667999999999999876677999988765210 0112579999999999997
No 21
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=4.5e-51 Score=396.88 Aligned_cols=277 Identities=25% Similarity=0.426 Sum_probs=229.6
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEe-----CCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVN-----CAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~-----~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 153 (427)
.++.|+++|.||||||++.|++||||+++||+ |..|..|.. ++.|||++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~~----------- 71 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS-------SGTFTPSSSSSYKNLG----------- 71 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT-------TCCBCGGGCTTCEEEE-----------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC-------CCcCCCccCcceeeCC-----------
Confidence 46799999999999999999999999999998 544556654 3799999999999976
Q ss_pred CCCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCC
Q 014294 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQA 233 (427)
Q Consensus 154 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~ 233 (427)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+||||||+.
T Consensus 72 -----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~---------~~GilGLg~~ 123 (339)
T 3fv3_A 72 -----------AAFTIRYGDGSTSQGTWGKDTVTINGV--------SITGQQIADVTQTSV---------DQGILGIGYT 123 (339)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS---------SSCEEECSCG
T ss_pred -----------ceEEEEECCCceEEEEEEEEEEEECCE--------EECceEEEEEEecCC---------CceeEEecCc
Confidence 899999999988999999999999874 345899999998642 5899999986
Q ss_pred CC----------------cHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEE
Q 014294 234 NS----------------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILE 291 (427)
Q Consensus 234 ~~----------------s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~ 291 (427)
.. +++.+|+++|.|+ ++||+||.+. ...|.|+||++|+++ +.|+|+. .+.+|.|+++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~ 202 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT-SSQALTISLA 202 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC-CSSSCEEEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc-cCccEEEEEE
Confidence 53 3899999999997 9999999875 458999999999764 8999998 5569999999
Q ss_pred EEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEE
Q 014294 292 EVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVT 371 (427)
Q Consensus 292 ~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 371 (427)
+|+|+++.+.. ...++|||||++++||++++++|.+++.+...........+.++| .. ..+|+|+
T Consensus 203 ~i~v~g~~~~~---------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C-----~~-~~~p~i~ 267 (339)
T 3fv3_A 203 SVNLKGSSFSF---------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDC-----NT-DTSGTTV 267 (339)
T ss_dssp EEEESSCEEEE---------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEECT-----TC-CCCSEEE
T ss_pred EEEECCEeecC---------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEec-----CC-CCCCcEE
Confidence 99999988753 255999999999999999999999999865321000112222456 33 3589999
Q ss_pred EEecCCcEEEECCCceEEEeCCceEE-EEEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 372 FKFKGSLSLTVYPHEYLFQIREDVWC-IGWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 372 f~f~gg~~~~l~~~~y~~~~~~~~~C-l~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+|.+|++|+||+++|+++..++ .| ++|... +.||||+.|||++|+
T Consensus 268 f~f~~g~~~~v~~~~~~~~~~~~-~C~~~i~~~--------~~~ilG~~fl~~~y~ 314 (339)
T 3fv3_A 268 FNFGNGAKITVPNTEYVYQNGDG-TCLWGIQPS--------DDTILGDNFLRHAYL 314 (339)
T ss_dssp EEETTSCEEEEEGGGGEEECSSS-CEEESEEEC--------SSCEECHHHHTTEEE
T ss_pred EEECCCCEEEECHHHheeeCCCC-eEEEEEEeC--------CcEEeChHHHhCEEE
Confidence 99966899999999999986544 57 578762 359999999999997
No 22
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2.2e-50 Score=406.51 Aligned_cols=300 Identities=22% Similarity=0.330 Sum_probs=238.6
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYP 157 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~ 157 (427)
..+..|+++|.||||+|+++|+|||||+++||+|.+| |.. ++.|||++|+||+...
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-------~~~y~~~~SsT~~~~~--------------- 126 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDLR--------------- 126 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-------CCcccCCCCCCcccCC---------------
Confidence 3456899999999999999999999999999999887 433 3789999999999976
Q ss_pred CCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC---
Q 014294 158 SCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN--- 234 (427)
Q Consensus 158 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 234 (427)
|.|.+.|++|+ +.|.+++|+|+|++.. . ....+.|+++.+....|. .....+||||||++.
T Consensus 127 -------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~-~-----~~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 190 (455)
T 3lpj_A 127 -------KGVYVPYTQGK-WEGELGTDLVSIPHGP-N-----VTVRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 190 (455)
T ss_dssp -------EEEEEECSSCE-EEEEEEEEEEECTTSC-S-----CEEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -------ccEEEEeCCeE-EEEEEEEEEEEECCCc-c-----eeeEEEEEEEEccCcccc--cCCCcceEEEeCcccccc
Confidence 89999999999 5999999999997521 0 111367898887766542 235689999999854
Q ss_pred -----CcHHHHHHhcCCCCCceeeeccc-----------cCCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEE
Q 014294 235 -----SSLLSQLAAAGNVRKEFAHCLDV-----------VKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVE 294 (427)
Q Consensus 235 -----~s~~~~l~~~~~i~~~Fs~~l~~-----------~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~ 294 (427)
.+++++|++|+.++++||+||.+ ...+|.|+||++|+++ +.|+|+. ...+|.|.+++|+
T Consensus 191 ~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 269 (455)
T 3lpj_A 191 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 269 (455)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred ccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEE
Confidence 36899999999998899999974 2457999999999875 7899998 5689999999999
Q ss_pred ECCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccc---cCCCCceeeecCCCCccCceEE
Q 014294 295 VGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHT---VEEQFSCFQFSKNVDDAFPTVT 371 (427)
Q Consensus 295 v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~ 371 (427)
||++.+.++...+. ...+||||||++++||.+++++|.+++.+......... ..+.++|+.........+|+|+
T Consensus 270 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~ 346 (455)
T 3lpj_A 270 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 346 (455)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred ECCEEccccccccC---CCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEE
Confidence 99999876654332 46799999999999999999999999998854211111 1124789866543344699999
Q ss_pred EEecCCc-----EEEECCCceEEEeCCc----eEEEEEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 372 FKFKGSL-----SLTVYPHEYLFQIRED----VWCIGWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 372 f~f~gg~-----~~~l~~~~y~~~~~~~----~~Cl~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+|.++. +|+|+|++|+++..+. ..|++|.... ..+.||||++|||++||
T Consensus 347 f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~-----~~~~~ILG~~fl~~~yv 405 (455)
T 3lpj_A 347 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-----SSTGTVMGAVIMEGFYV 405 (455)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE-----ESSCEEECHHHHTTEEE
T ss_pred EEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccC-----CCCcEEEChHHhCCeEE
Confidence 9995543 5999999999987542 5898743211 13579999999999997
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=7.2e-51 Score=395.93 Aligned_cols=284 Identities=23% Similarity=0.373 Sum_probs=230.2
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCC--CCCCCCC--CCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAG--CSRCPTK--SDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~--C~~C~~~--~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
.++.|+++|.||||||++.|++||||+++||++.. |..|... ...|..++.|||++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------ 77 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC------------
Confidence 46899999999999999999999999999999764 7555321 2235556899999999999976
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (427)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||+..
T Consensus 78 ----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 78 ----------TPFKIGYGDGSSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ----------EEEEEECSSSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CeEEEEecCCCeEEEEEEEEEEEECCE--------EecceEEEEEEccC---------CCccEEEecCcc
Confidence 899999999998899999999999874 34589999998753 368999999976
Q ss_pred -------CcHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEee
Q 014294 235 -------SSLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLD 301 (427)
Q Consensus 235 -------~s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~ 301 (427)
.+++.+|+++|.|+ ++||+||.+. ...|.|+||++|+++ +.|+|+. .+.+|.|++++|+|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEec
Confidence 47999999999997 8999999875 457999999999875 8899998 55699999999999999876
Q ss_pred CCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEE
Q 014294 302 LPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLT 381 (427)
Q Consensus 302 ~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~ 381 (427)
.+ ...+||||||++++||++++++|.+++.+...........+..+| . ..|+|+|+|.+|.+++
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C-----~---~~p~i~f~f~~g~~~~ 273 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDC-----N---LSGDVVFNFSKNAKIS 273 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEECS-----C---CCSEEEEEESTTCEEE
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEec-----C---CCCceEEEECCCCEEE
Confidence 42 256999999999999999999999999765421111111122455 3 4699999996689999
Q ss_pred ECCCceEEEeC--Cc---eEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 382 VYPHEYLFQIR--ED---VWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 382 l~~~~y~~~~~--~~---~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
||+++|+++.. ++ ..|+ +|... +.||||+.|||++|+
T Consensus 274 vp~~~~~~~~~~~~g~~~~~C~~~i~~~--------~~~ilG~~fl~~~y~ 316 (342)
T 3pvk_A 274 VPASEFAASLQGDDGQPYDKCQLLFDVN--------DANILGDNFLRSAYI 316 (342)
T ss_dssp EEGGGGEEC----------CEEESEEEC--------TTCEECHHHHTTEEE
T ss_pred EcHHHheeeccccCCCcCCeeEEEEeeC--------CCeEeCHHHHhcEEE
Confidence 99999998732 22 5797 56552 359999999999997
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4.1e-51 Score=407.85 Aligned_cols=282 Identities=22% Similarity=0.349 Sum_probs=232.0
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 155 (427)
..++.|+++|.||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++...
T Consensus 135 ~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~-------~~~ydps~SsT~~~~~------------- 194 (453)
T 2bju_A 135 FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT-------KHLYDSSKSRTYEKDG------------- 194 (453)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG-------SCCBCGGGCTTCEEEE-------------
T ss_pred cCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC-------CCcCCCccCCceeECC-------------
Confidence 46789999999999999999999999999999999996 5654 3799999999999865
Q ss_pred CCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeeccc--CCCCCCCCCCcceeeecCCC
Q 014294 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQS--GDLGSSTDAAVDGILGFGQA 233 (427)
Q Consensus 156 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~~~~~~~GIlGLg~~ 233 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||++... +.+. .....+||||||++
T Consensus 195 ---------~~~~i~YgdGs-~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f--~~~~~dGIlGLg~~ 253 (453)
T 2bju_A 195 ---------TKVEMNYVSGT-VSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTY--TASTFDGILGLGWK 253 (453)
T ss_dssp ---------EEEEEECSSSE-EEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHH--HHSSCCEEEECSCG
T ss_pred ---------cEEEEEcCCCC-eEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccc--cccCCceeEeccCC
Confidence 89999999999 799999999999863 456 9999999876 4321 23467999999986
Q ss_pred C------CcHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEee
Q 014294 234 N------SSLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLD 301 (427)
Q Consensus 234 ~------~s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~ 301 (427)
. .+++++|++||.++ ++||+||.+. ..+|.|+|||+|+++ +.|+|+. .+.+|.|.++ |+||++.+
T Consensus 254 ~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~~~- 330 (453)
T 2bju_A 254 DLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNIML- 330 (453)
T ss_dssp GGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTEEE-
T ss_pred cccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcEEe-
Confidence 4 36899999999996 9999999975 357999999999764 8899997 5689999999 99999321
Q ss_pred CCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEE
Q 014294 302 LPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLT 381 (427)
Q Consensus 302 ~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~ 381 (427)
....+||||||+++++|++++++|.+++.+... ..+ .+|..+|.. ..+|+|+|+| +|++|+
T Consensus 331 ---------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~----~~g----~~~~v~C~~-~~~P~itf~f-gg~~~~ 391 (453)
T 2bju_A 331 ---------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIKV----PFL----PFYVTLCNN-SKLPTFEFTS-ENGKYT 391 (453)
T ss_dssp ---------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEEC----TTS----SCEEEETTC-TTCCCEEEEC-SSCEEE
T ss_pred ---------ccccEEEcCCCCeEecCHHHHHHHHHHhCCccc----CCC----ceEEEecCC-CCCCcEEEEE-CCEEEE
Confidence 146799999999999999999999888754311 111 133334444 5799999999 899999
Q ss_pred ECCCceEEEeCC--ceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 382 VYPHEYLFQIRE--DVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 382 l~~~~y~~~~~~--~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|||++|+++... +..|+ +|...+. +.+.||||++|||++|+
T Consensus 392 l~~~~yi~~~~~~g~~~C~~~~~~~~~----~~~~~ILGd~Flr~~yv 435 (453)
T 2bju_A 392 LEPEYYLQHIEDVGPGLCMLNIIGLDF----PVPTFILGDPFMRKYFT 435 (453)
T ss_dssp ECHHHHEEECTTTSTTEEEECEEECCC----SSCEEEECHHHHHHEEE
T ss_pred ECHHHhEeecccCCCceEEEEEEeCCC----CCCCEEECHHHhhcEEE
Confidence 999999998753 45898 7877652 23589999999999996
No 25
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.3e-50 Score=404.80 Aligned_cols=281 Identities=20% Similarity=0.335 Sum_probs=234.8
Q ss_pred CCCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 77 ~~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
+..+..|+++|.||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~-------~~ydps~SsT~~~~~------------ 193 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK-------NHYDSSKSKTYEKDD------------ 193 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEEEE------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC-------CCCCCCCCcccccCC------------
Confidence 346789999999999999999999999999999999994 57543 799999999999865
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeec----ccCCCCCCCCCCcceeeec
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNR----QSGDLGSSTDAAVDGILGF 230 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~~GIlGL 230 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||++. .++ + .....+|||||
T Consensus 194 ----------~~f~i~YgdGs-~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f---~~~~~dGILGL 249 (451)
T 3qvc_A 194 ----------TPVKLTSKAGT-ISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-Y---SESDVDGVFGL 249 (451)
T ss_dssp ----------EEEEEECSSEE-EEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-H---HHSCCCEEEEC
T ss_pred ----------CEEEEEECCCE-EEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-c---cCCCCCEEEec
Confidence 89999999999 899999999999864 456 99999998 555 3 23467999999
Q ss_pred CCCC------CcHHHHHHhcCCCC-Cceeeecccc-CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCE
Q 014294 231 GQAN------SSLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGN 298 (427)
Q Consensus 231 g~~~------~s~~~~l~~~~~i~-~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~ 298 (427)
|++. .+++++|.++|.|+ ++||+||.+. ..+|.|+|||+|+++ +.|+|+. ++.+|.|.++ |+||++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 9865 36899999999997 9999999986 358999999999875 8899998 6789999999 999998
Q ss_pred EeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCc
Q 014294 299 PLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSL 378 (427)
Q Consensus 299 ~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~ 378 (427)
. . ....++|||||+++++|++++++|.+++++.... . ..+|.++|. ...+|+|+|+| +|.
T Consensus 328 ~-~---------~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~---~-----~g~y~v~C~-~~~~P~itf~f-gg~ 387 (451)
T 3qvc_A 328 S-S---------KKANVILDSATSVITVPTEFFNQFVESASVFKVP---F-----LSLYVTTCG-NTKLPTLEYRS-PNK 387 (451)
T ss_dssp E-E---------EEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT---T-----SSCEEEETT-CTTCCCEEEEE-TTE
T ss_pred c-C---------CCceEEEeCCCccccCCHHHHHHHHHHcCCeecC---C-----CCeEEeeCC-cCcCCcEEEEE-CCE
Confidence 1 1 1466999999999999999999999888654321 0 133455555 46799999999 899
Q ss_pred EEEECCCceEEEeC--CceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 379 SLTVYPHEYLFQIR--EDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 379 ~~~l~~~~y~~~~~--~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+++||+++|+++.. ++..|+ +|...+. ..+.||||++|||++|+
T Consensus 388 ~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~----~~~~~ILG~~FLr~~Yv 434 (451)
T 3qvc_A 388 VYTLEPKQYLEPLENIFSALCMLNIVPIDL----EKNTFVLGDPFMRKYFT 434 (451)
T ss_dssp EEEECHHHHEEECTTTSTTEEEECEEECCC----STTEEEECHHHHHHEEE
T ss_pred EEEEcHHHheeecccCCCCeEEEEEEeCCC----CCCCEEECHHHhhcEEE
Confidence 99999999999865 246787 6776542 13689999999999996
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=5.8e-50 Score=395.36 Aligned_cols=297 Identities=23% Similarity=0.359 Sum_probs=234.7
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 158 (427)
.+..|+++|.||||+|++.|+|||||+++||+|.+|..|. +.|||++|+|++...
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~~---------------- 65 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSKG---------------- 65 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEEE----------------
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeCC----------------
Confidence 4578999999999999999999999999999999886653 689999999999976
Q ss_pred CCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 014294 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (427)
Q Consensus 159 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 235 (427)
|.|.+.|++|+ +.|.+++|+|+|++... ....+.|++..+..+.|. .....+||||||++..
T Consensus 66 ------~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~dGilGLg~~~~s~~ 130 (383)
T 2ewy_A 66 ------FDVTVKYTQGS-WTGFVGEDLVTIPKGFN------TSFLVNIATIFESENFFL--PGIKWNGILGLAYATLAKP 130 (383)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEEETTTEE------EEEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred ------ceEEEEECCcE-EEEEEEEEEEEECCCcc------ceeEEEEEEEEeecceee--ccCcCceEEecCchhcccc
Confidence 89999999998 69999999999975311 011467888776555442 2346799999998643
Q ss_pred -----cHHHHHHhcCCCCCceeeeccc--------cCCcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCE
Q 014294 236 -----SLLSQLAAAGNVRKEFAHCLDV--------VKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGN 298 (427)
Q Consensus 236 -----s~~~~l~~~~~i~~~Fs~~l~~--------~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~ 298 (427)
+++++|.+|+.++++||+||.+ ...+|.|+||++|++ .+.|+|++ ...+|.|.+++|+||++
T Consensus 131 ~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~ 209 (383)
T 2ewy_A 131 SSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQ 209 (383)
T ss_dssp CTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTE
T ss_pred cccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCE
Confidence 5888999999888899999863 145799999999965 48999998 56799999999999999
Q ss_pred EeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCccccc---CCCCceeeecCCCCccCceEEEEec
Q 014294 299 PLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTV---EEQFSCFQFSKNVDDAFPTVTFKFK 375 (427)
Q Consensus 299 ~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~P~i~f~f~ 375 (427)
.+.++...+. ...+||||||++++||++++++|.+++.+.......... .+..+|+.........+|+|+|+|.
T Consensus 210 ~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 286 (383)
T 2ewy_A 210 SLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLR 286 (383)
T ss_dssp ECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEE
T ss_pred EccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEEC
Confidence 9876654442 467999999999999999999999999887542111111 1236898654433346899999996
Q ss_pred CC-----cEEEECCCceEEEeC---CceEEEEE--EeCCCCCCCCCCeEEEcccccccccC
Q 014294 376 GS-----LSLTVYPHEYLFQIR---EDVWCIGW--QNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 376 gg-----~~~~l~~~~y~~~~~---~~~~Cl~i--~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
++ .+|+||+++|+.+.. .+..|+++ ... .+.||||+.|||++||
T Consensus 287 g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~-------~~~~ILG~~fl~~~yv 340 (383)
T 2ewy_A 287 DENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS-------TNALVIGATVMEGFYV 340 (383)
T ss_dssp CSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE-------SSCEEECHHHHTTEEE
T ss_pred CCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC-------CCcEEEChHHhCCeeE
Confidence 54 379999999999864 35689854 332 2469999999999997
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.1e-49 Score=394.74 Aligned_cols=296 Identities=22% Similarity=0.327 Sum_probs=235.6
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 158 (427)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|. +.|||++|+|++...
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~---------~~y~~~~SsT~~~~~---------------- 73 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH---------RYYQRQLSSTYRDLR---------------- 73 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS---------CCCCGGGCTTCEEEE----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc---------CCcCcccCCCceeCC----------------
Confidence 4678999999999999999999999999999998886542 689999999999976
Q ss_pred CCCCCcceeeEEcCCCCeeeeeEEEEEEEEcc-cCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC--
Q 014294 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQ-ASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS-- 235 (427)
Q Consensus 159 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 235 (427)
|.|.+.|++|+ +.|.+++|+|+|++ .... ..+.|++..+..+.|. .....+||||||++..
T Consensus 74 ------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~--~~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 74 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 137 (395)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------ceEEEEECCcE-EEEEEEeEEEEECCCCCce-------EEEEEEEEEccCcccc--cccCccceEEcCchhhcc
Confidence 89999999998 59999999999973 2111 1367888776555442 2346799999998643
Q ss_pred ------cHHHHHHhcCCCCCceeeecccc-----------CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEE
Q 014294 236 ------SLLSQLAAAGNVRKEFAHCLDVV-----------KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVE 294 (427)
Q Consensus 236 ------s~~~~l~~~~~i~~~Fs~~l~~~-----------~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~ 294 (427)
+++++|++|+.++++||+||.+. ..+|.|+||++|+++ +.|+|+. +..+|.|.+++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 68899999999988999999752 367999999999774 7899998 5689999999999
Q ss_pred ECCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCccccc---CCCCceeeecCCCCccCceEE
Q 014294 295 VGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTV---EEQFSCFQFSKNVDDAFPTVT 371 (427)
Q Consensus 295 v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~P~i~ 371 (427)
||++.+.++...+. ...+||||||++++||++++++|.+++.+.......... .+..+|+.........+|+|+
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 293 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 293 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEE
Confidence 99998876554332 357999999999999999999999999887542111111 123689865443334699999
Q ss_pred EEecCCc-----EEEECCCceEEEeCC----ceEEE--EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 372 FKFKGSL-----SLTVYPHEYLFQIRE----DVWCI--GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 372 f~f~gg~-----~~~l~~~~y~~~~~~----~~~Cl--~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+|.++. +|+|+|++|+++..+ ...|+ ++... .+.||||+.|||++||
T Consensus 294 f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-------~~~~ILG~~fl~~~yv 352 (395)
T 2qp8_A 294 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-------STGTVMGAVIMEGFYV 352 (395)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-------SSCEEECHHHHTTEEE
T ss_pred EEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC-------CCcEEEChHHhCCeeE
Confidence 9996553 799999999998643 34897 45432 2469999999999997
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.7e-49 Score=391.95 Aligned_cols=299 Identities=21% Similarity=0.321 Sum_probs=234.7
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 158 (427)
.+..|+++|.||||+|++.|+|||||+++||+|.+| |.. ++.|+|++|+|++...
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-------~~~y~~~~SsT~~~~~---------------- 80 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDLR---------------- 80 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-------cCCcCcccCcccccCC----------------
Confidence 457899999999999999999999999999999887 432 3789999999999976
Q ss_pred CCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC----
Q 014294 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN---- 234 (427)
Q Consensus 159 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~---- 234 (427)
|.|.+.|++|+ +.|.+++|+|+|++... ....+.|++.....+.+. .....+||||||++.
T Consensus 81 ------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~------~~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~~ 145 (402)
T 3vf3_A 81 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPN------VTVRANIAAITESDKFFI--NGSNWEGILGLAYAEIARP 145 (402)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred ------CEEEEEECcEE-EEEEEEEEEEEECCccc------cceeeeEEEEEccccccc--cCCCccceEEcCchhhccc
Confidence 89999999999 69999999999974210 111345888777665542 235679999999853
Q ss_pred ----CcHHHHHHhcCCCCCceeeeccc-----------cCCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEE
Q 014294 235 ----SSLLSQLAAAGNVRKEFAHCLDV-----------VKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEV 295 (427)
Q Consensus 235 ----~s~~~~l~~~~~i~~~Fs~~l~~-----------~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v 295 (427)
.+++++|++|+.++++||+||.+ ...+|.|+||++|+++ +.|+|+. ...+|.|.+++|+|
T Consensus 146 ~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 224 (402)
T 3vf3_A 146 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 224 (402)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEEE
T ss_pred CCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEEE
Confidence 46899999999998899999964 2347999999999875 7899998 57899999999999
Q ss_pred CCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCccccc---CCCCceeeecCCCCccCceEEE
Q 014294 296 GGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTV---EEQFSCFQFSKNVDDAFPTVTF 372 (427)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~P~i~f 372 (427)
+++.+.++...+. ...+||||||++++||.+++++|.+++.+.....+.... .+.++|+.........+|+|+|
T Consensus 225 ~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f 301 (402)
T 3vf3_A 225 NGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISL 301 (402)
T ss_dssp TTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEE
T ss_pred CCEEecccccccC---CCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEE
Confidence 9999876544332 467999999999999999999999999988531111111 1247998765443447999999
Q ss_pred EecCCc-----EEEECCCceEEEeCCc----eEEEEEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 373 KFKGSL-----SLTVYPHEYLFQIRED----VWCIGWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 373 ~f~gg~-----~~~l~~~~y~~~~~~~----~~Cl~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+|.++. +|+|+|++|+++..+. ..|+++.... ..+.||||++|||++||
T Consensus 302 ~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~-----~~~~~ILG~~fl~~~yv 359 (402)
T 3vf3_A 302 YLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-----SSTGTVMGAVIMEGFYV 359 (402)
T ss_dssp EEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE-----ESSCEEECHHHHTTEEE
T ss_pred EEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccC-----CCCcEEEChHHhCCeEE
Confidence 995543 5999999999986542 5898642211 13569999999999997
No 29
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.6e-50 Score=389.51 Aligned_cols=284 Identities=17% Similarity=0.218 Sum_probs=232.4
Q ss_pred CCCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 77 ~~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
++.+..|+++|.|| +|++.|++||||+++||+|..|. .|.. ..++.|||++| |++...
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~~~------------ 72 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYISDG------------ 72 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEEEE------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEECC------------
Confidence 34678999999999 99999999999999999999996 6721 12379999999 998864
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~ 234 (427)
+.|.+.|++|+. .|.+++|+|+|++. .++++.|||++.....| .....+||||||++.
T Consensus 73 ----------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~~~~f---~~~~~~GilGLg~~~ 130 (330)
T 1yg9_A 73 ----------NVQVKFFDTGSA-VGRGIEDSLTISQL--------TTSQQDIVLADELSQEV---CILSADVVVGIAAPG 130 (330)
T ss_dssp ----------EEEEEETTTEEE-EEEEEEEEEEETTE--------EEEEEEEEEEEEECTHH---HHTTCSEEEECSCTT
T ss_pred ----------CEEEEEECCceE-EEEEEEEEEEECCE--------EEcCeEEEEEEEccccc---ccccCceEEEcCcch
Confidence 799999999985 99999999999864 34589999999873323 234679999999976
Q ss_pred Cc-------HHHHHHhcCCCCCceeeecccc-CC--cceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEe
Q 014294 235 SS-------LLSQLAAAGNVRKEFAHCLDVV-KG--GGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPL 300 (427)
Q Consensus 235 ~s-------~~~~l~~~~~i~~~Fs~~l~~~-~~--~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~ 300 (427)
.+ ++++|++|+.++++||+||.+. +. +|.|+||++|+++ +.|+|+. .+.+|.|++++|+|+++.+
T Consensus 131 ~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 131 CPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEE
T ss_pred hccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEE
Confidence 65 8999999998889999999875 23 7999999999874 7899998 6789999999999999876
Q ss_pred eCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCcee-eecCCCCccCceEEEEecCCcE
Q 014294 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCF-QFSKNVDDAFPTVTFKFKGSLS 379 (427)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~-~~~~~~~~~~P~i~f~f~gg~~ 379 (427)
. + ....+||||||+++++|++++++|.+++.+... ..+ ...| .++|.....+|+|+|+| +|++
T Consensus 210 ~-~-------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~g---~~~~~~~~C~~~~~~p~i~f~f-gg~~ 273 (330)
T 1yg9_A 210 A-P-------AGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVE----KTT---TRRICKLDCSKIPSLPDVTFVI-NGRN 273 (330)
T ss_dssp E-C-------TTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEE----ECS---SCEEEEECGGGGGGSCCEEEEE-TTEE
T ss_pred c-C-------CCcEEEEecCCccccCCHHHHHHHHHHhCCccc----CCC---ceEEEEEECCCccccCcEEEEE-CCEE
Confidence 4 1 246799999999999999999999999865421 111 0023 34444445789999999 8999
Q ss_pred EEECCCceEEEeCCceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 380 LTVYPHEYLFQIREDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 380 ~~l~~~~y~~~~~~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
|+||+++|+++. +..|+ +|.... ..+.||||++|||++|+
T Consensus 274 ~~l~~~~y~~~~--~~~C~~~i~~~~-----~~~~~ilG~~fl~~~y~ 314 (330)
T 1yg9_A 274 FNISSQYYIQQN--GNLCYSGFQPCG-----HSDHFFIGDFFVDHYYS 314 (330)
T ss_dssp EEECHHHHEEEE--TTEEEESEEEET-----TCSSEEECHHHHTTEEE
T ss_pred EEECHHHhcccC--CCcEEEEEEeCC-----CCCeEEecHHHhhheEE
Confidence 999999999987 45898 676542 13579999999999996
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.6e-49 Score=383.44 Aligned_cols=283 Identities=22% Similarity=0.315 Sum_probs=226.6
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 158 (427)
.+..|+++|.|| +|++.|++||||+++||+|..|..|..+ .++.|||++|+ ++..
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~~----------------- 66 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT-----GHDLYTPSSSA-TKLS----------------- 66 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT-----TSCCCBCCSSC-EECT-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC-----CCCCCCchhcC-CccC-----------------
Confidence 578999999999 9999999999999999999999876322 24789999998 4431
Q ss_pred CCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 014294 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (427)
Q Consensus 159 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 235 (427)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+. .....+||||||++..
T Consensus 67 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 67 -----GYSWDISYGDGSSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFV--QDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp -----TCBEEEECSSSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--TSTTCCEEEECSCGGGCCC
T ss_pred -----CCEEEEEeCCCCEEEEEEEEeEEEECCE--------EEcceEEEEEEecCcccc--ccCCCceEEEeCccccccc
Confidence 3899999999998899999999999864 345899999998765432 1246799999998643
Q ss_pred ------cHHHHHHhcCCCCCceeeeccccCCcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCEEeeCCCC
Q 014294 236 ------SLLSQLAAAGNVRKEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLPTS 305 (427)
Q Consensus 236 ------s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 305 (427)
+++++|.++ +.+++||+||.+ +.+|.|+||++|++ ++.|+|+.....+|.|++++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~-i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~---- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ-LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS---- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB----
T ss_pred CcCCCCCHHHHHHHh-cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc----
Confidence 478999987 334999999987 46899999999975 48999998667899999999999997653
Q ss_pred CcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEECCC
Q 014294 306 LLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVYPH 385 (427)
Q Consensus 306 ~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 385 (427)
.....+||||||+++++|++++++|.+++.+.... .....+.++|+ ..+|+|+|+| +|++|+||++
T Consensus 206 ----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~--~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~i~~~ 271 (325)
T 1ibq_A 206 ----SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQES--YEAGGYVFSCS-------TDLPDFTVVI-GDYKAVVPGK 271 (325)
T ss_dssp ----SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBCC--SSSSSCEEETT-------CCCCCEEEEE-TTEEEEECHH
T ss_pred ----CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceEc--CcCCeEEEEcC-------CCCCcEEEEE-CCEEEEECHH
Confidence 12467999999999999999999999887432211 11122224663 3689999999 8999999999
Q ss_pred ceEEEeCC--ceEEEE-EEeCCCCCCCCCCeEEEcccccccccC
Q 014294 386 EYLFQIRE--DVWCIG-WQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 386 ~y~~~~~~--~~~Cl~-i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+|+++..+ ...|++ |.... +.+.||||++|||++|+
T Consensus 272 ~~~~~~~~~~~~~C~~~i~~~~-----~~~~~iLG~~fl~~~y~ 310 (325)
T 1ibq_A 272 YINYAPVSTGSSTCYGGIQSNS-----GLGLSILGDVFLKSQYV 310 (325)
T ss_dssp HHEEEESSTTCSEEEESEEECT-----TTCSEEECHHHHTTEEE
T ss_pred HhcccccCCCCCeEEEEEEcCC-----CCCceEEChHHhcCEEE
Confidence 99987532 368985 66543 24579999999999997
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.9e-49 Score=382.35 Aligned_cols=282 Identities=21% Similarity=0.306 Sum_probs=226.0
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 158 (427)
.+..|+++|.|| ||++.|+|||||+++||+|..|..|.-+ .++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS-----GHDYYTPGSSA-QKID----------------- 67 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TCCCBCCCTTC-EEEE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc-----CCCCCCccccC-CccC-----------------
Confidence 578999999999 8999999999999999999999865321 24789999999 5532
Q ss_pred CCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 014294 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (427)
Q Consensus 159 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 235 (427)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+. .....+||||||++..
T Consensus 68 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 68 -----GATWSISYGDGSSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFT--QDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEcCCCCeEEEEEEEEEEEECCE--------EECceEEEEEEecccccc--ccCCCceEEecCccccccc
Confidence 3899999999998899999999999864 345899999998755432 1245799999998643
Q ss_pred ------cHHHHHHhcCCCCCceeeeccccCCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEeeCCCC
Q 014294 236 ------SLLSQLAAAGNVRKEFAHCLDVVKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLPTS 305 (427)
Q Consensus 236 ------s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 305 (427)
+++++|+++ +.+++||+||.+ +.+|.|+||++|+++ +.|+|++....+|.|++++|+||+ .+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~---- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS---- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE----
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc----
Confidence 478999987 334999999987 468999999999875 789999866789999999999999 542
Q ss_pred CcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEECCC
Q 014294 306 LLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVYPH 385 (427)
Q Consensus 306 ~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 385 (427)
.....+||||||+++++|++++++|.+++.+... ......+.++| . ..+|+|+|+| +|++|+||++
T Consensus 206 ----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~--~~~~g~~~~~C-----~--~~~P~i~f~f-gg~~~~i~~~ 271 (323)
T 1izd_A 206 ----SDSITGIADTGTTLLLLDDSIVDAYYEQVNGASY--DSSQGGYVFPS-----S--ASLPDFSVTI-GDYTATVPGE 271 (323)
T ss_dssp ----CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE--ETTTTEEEEET-----T--CCCCCEEEEE-TTEEEEECHH
T ss_pred ----CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE--cCcCCEEEEEC-----C--CCCceEEEEE-CCEEEecCHH
Confidence 1246799999999999999999999888742211 00111122355 3 4689999999 8999999999
Q ss_pred ceEEEeCCceEEEE-EEeCCCCCCCCCCeEEEcccccccccC
Q 014294 386 EYLFQIREDVWCIG-WQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 386 ~y~~~~~~~~~Cl~-i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+|+++..++..|++ |...+ +.+.||||++|||++|+
T Consensus 272 ~~~~~~~~~~~C~~~i~~~~-----~~~~~IlG~~fl~~~y~ 308 (323)
T 1izd_A 272 YISFADVGNGQTFGGIQSNS-----GIGFSIFGDVFLKSQYV 308 (323)
T ss_dssp HHEEEECSTTEEEESEEECT-----TTSSEEECHHHHTTEEE
T ss_pred HeEEecCCCCeEEEEEEcCC-----CCCcEEEChHHhcCEEE
Confidence 99998655668985 76643 24579999999999997
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.4e-49 Score=381.80 Aligned_cols=281 Identities=20% Similarity=0.319 Sum_probs=224.4
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~ 158 (427)
.+..|+++|.|| +|++.|+|||||+++||+|..|..|..+ .++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS-----GHSVYNPSATG-KELS----------------- 67 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCHHHHC-EEEE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc-----CCCCCCcccCC-cccC-----------------
Confidence 578999999999 9999999999999999999999866322 24799999999 6543
Q ss_pred CCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 014294 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (427)
Q Consensus 159 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 235 (427)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++..++.+. .....+||||||++..
T Consensus 68 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 68 -----GYTWSISYGDGSSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQ--QDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--TCTTCSEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccc--cCCCCceEEEeCccccccc
Confidence 3899999999998899999999999864 345899999998755432 1246799999998543
Q ss_pred ------cHHHHHHhcCCCCCceeeeccccCCcceEEeCCcCCC----CceeecCCCCCCcceEEEEEEEECCEEeeCCCC
Q 014294 236 ------SLLSQLAAAGNVRKEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLPTS 305 (427)
Q Consensus 236 ------s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 305 (427)
+++++|+++ +.+++||+||.+ +.+|.|+||++|++ ++.|+|+..+..+|.|++++|+|++ ...
T Consensus 133 ~~~~~~~~~~~l~~~-i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~---- 205 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS-LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QSG---- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG-BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EEE----
T ss_pred ccCCCCCHHHHHHHh-cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-ccC----
Confidence 588999987 334999999987 46899999999975 4899999866789999999999999 211
Q ss_pred CcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEEEecCCcEEEECCC
Q 014294 306 LLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVYPH 385 (427)
Q Consensus 306 ~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~ 385 (427)
....+||||||+++++|++++++|.+++.+... ......+.++| . ..+|+|+|+| +|++|+||++
T Consensus 206 -----~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~--~~~~g~~~~~C-----~--~~~P~i~f~f-gg~~~~l~~~ 270 (323)
T 1bxo_A 206 -----DGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ--DSNAGGYVFDC-----S--TNLPDFSVSI-SGYTATVPGS 270 (323)
T ss_dssp -----EEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE--ETTTTEEEECT-----T--CCCCCEEEEE-TTEEEEECHH
T ss_pred -----CCceEEEeCCCCceeCCHHHHHHHHHhCCCceE--cCcCCEEEEEC-----C--CCCceEEEEE-CCEEEEECHH
Confidence 145699999999999999999999888743211 01111122456 3 3689999999 8999999999
Q ss_pred ceEEEeCC-ceEEEE-EEeCCCCCCCCCCeEEEcccccccccC
Q 014294 386 EYLFQIRE-DVWCIG-WQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 386 ~y~~~~~~-~~~Cl~-i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+|+++..+ +..|++ |...+ ..+.||||++|||++|+
T Consensus 271 ~~~~~~~~~~~~C~~~i~~~~-----~~~~~ILG~~fl~~~y~ 308 (323)
T 1bxo_A 271 LINYGPSGDGSTCLGGIQSNS-----GIGFSIFGDIFLKSQYV 308 (323)
T ss_dssp HHEEEECSSSSCEEESEEECT-----TCSSEEECHHHHTTEEE
T ss_pred HeEEeccCCCCeEEEEEECCC-----CCCcEEEChHHHcCEEE
Confidence 99987643 368985 76643 24579999999999997
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2e-47 Score=371.12 Aligned_cols=273 Identities=21% Similarity=0.310 Sum_probs=218.4
Q ss_pred CceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCCCCCCC
Q 014294 80 TGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPSC 159 (427)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~~~~c 159 (427)
+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~~------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSATS------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEEE-------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccccC-------------------
Confidence 568999999999999999999999999999874 4799998886543
Q ss_pred CCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC----
Q 014294 160 SPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS---- 235 (427)
Q Consensus 160 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 235 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ | ...+||||||+...
T Consensus 57 -----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~-----~~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 57 -----DKVSVTYGSGS-FSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F-----DGVDGILGVGPVDLTVGT 116 (340)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C-----TTCSEEEECSCGGGGTTS
T ss_pred -----ceEEEEECCcE-EEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C-----cCCCcEEECCcccccccc
Confidence 89999999998 799999999999864 355899999998754 3 24799999998643
Q ss_pred ----------cHHHHHHhcCCCC-Cceeeecccc----CCcceEEeCCcCCC----CceeecCCCC---CCcceEEEEEE
Q 014294 236 ----------SLLSQLAAAGNVR-KEFAHCLDVV----KGGGIFAIGDVVSP----KVKTTPMVPN---MPHYNVILEEV 293 (427)
Q Consensus 236 ----------s~~~~l~~~~~i~-~~Fs~~l~~~----~~~G~l~~Gg~d~~----~~~~~p~~~~---~~~~~v~l~~i 293 (427)
+++++|+++|+|+ ++||+||.+. ..+|.|+||++|++ ++.|+|++.+ ..+|.|. ++|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 5789999999997 9999999863 34799999999975 4899999854 5789999 999
Q ss_pred EECC-EEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCCCccCceEEE
Q 014294 294 EVGG-NPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLKMHTVEEQFSCFQFSKNVDDAFPTVTF 372 (427)
Q Consensus 294 ~v~~-~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f 372 (427)
+|++ +.+.. ...+||||||++++||.+++++|.+++.+.... ....+.++| .....+|+|+|
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~---~~g~~~~~C-----~~~~~~p~i~f 258 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVADN---NTGLLRLTT-----AQYANLQSLFF 258 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEECT---TTSSEEECH-----HHHHTCCCEEE
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcC---CCCeEEeec-----cccccCCcEEE
Confidence 9998 77641 246999999999999999999998887654321 111122355 33346899999
Q ss_pred EecCCcEEEECCCceEEEeC-------CceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 373 KFKGSLSLTVYPHEYLFQIR-------EDVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 373 ~f~gg~~~~l~~~~y~~~~~-------~~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+| +|.+|+|+|++|+++.. +...|+ +|...+..... ...||||++|||++||
T Consensus 259 ~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~-~~~~iLG~~fl~~~y~ 318 (340)
T 1wkr_A 259 TI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGE-GLDFINGLTFLERFYS 318 (340)
T ss_dssp EE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTS-SCCEEECHHHHTSEEE
T ss_pred EE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCC-CcceEeChHhhhheEE
Confidence 99 88999999999998743 123564 77654322111 2469999999999997
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-43 Score=324.25 Aligned_cols=215 Identities=24% Similarity=0.422 Sum_probs=184.6
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS---RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 154 (427)
+.+..|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 10 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~~------------ 70 (239)
T 1b5f_A 10 DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH-------SMYESSDSSTYKENG------------ 70 (239)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS-------CCBCGGGCTTCEEEE------------
T ss_pred cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC-------CCCCCccCCCeeeCC------------
Confidence 46789999999999999999999999999999999986 46543 689999999999865
Q ss_pred CCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcccCCCCcccCCCceeeEEeeecccCC-CCCCCCCCcceeeecCCC
Q 014294 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGD-LGSSTDAAVDGILGFGQA 233 (427)
Q Consensus 155 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fG~~~~~~~~-~~~~~~~~~~GIlGLg~~ 233 (427)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+. | .....+||||||+.
T Consensus 71 ----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f---~~~~~~GilGLg~~ 128 (239)
T 1b5f_A 71 ----------TFGAIIYGTGS-ITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVF---LHRLFDGILGLSFQ 128 (239)
T ss_dssp ----------EEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH---TTCSCCEEEECSCC
T ss_pred ----------cEEEEEECCCc-EEEEEEEEEEEECCc--------EEccEEEEEEEeccCccc---cccCcceEEecCcc
Confidence 78999999998 799999999999864 3458999999876542 3 23467999999998
Q ss_pred CCc--HHHHHHhcCCCC-Cceeeecccc---CCcceEEeCCcCCCC----ceeecCCCCCCcceEEEEEEEECCEEeeCC
Q 014294 234 NSS--LLSQLAAAGNVR-KEFAHCLDVV---KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLP 303 (427)
Q Consensus 234 ~~s--~~~~l~~~~~i~-~~Fs~~l~~~---~~~G~l~~Gg~d~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~ 303 (427)
..+ ++.+|++++.++ ++||+||.+. ..+|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+++.+.+.
T Consensus 129 ~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~ 207 (239)
T 1b5f_A 129 TISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGFC 207 (239)
T ss_dssp SSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCTT
T ss_pred ccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEeccc
Confidence 765 778999999996 9999999874 357999999999875 7899997 5679999999999999987643
Q ss_pred CCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHH
Q 014294 304 TSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILD 340 (427)
Q Consensus 304 ~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~ 340 (427)
. ....+||||||++++||++++++|.+++++
T Consensus 208 ~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 208 A------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp T------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred C------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 2 246799999999999999999999998754
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=3.8e-32 Score=250.88 Aligned_cols=205 Identities=20% Similarity=0.307 Sum_probs=162.6
Q ss_pred CceeeEEeeecccCCCCCCCCCCcceeeecCCCCC------cHHHHHHhcCCCC-CceeeeccccC-C--cceEEeCCcC
Q 014294 201 NSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS------SLLSQLAAAGNVR-KEFAHCLDVVK-G--GGIFAIGDVV 270 (427)
Q Consensus 201 ~~~~~fG~~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~~l~~~~~i~-~~Fs~~l~~~~-~--~G~l~~Gg~d 270 (427)
++++.|||++...+.+. .....+||||||++.. +++++|++||.++ ++||+||.+.. . +|.|+||++|
T Consensus 5 v~~~~Fg~~~~~~~~~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 5 VERQVFGEATKQPGITF--IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEECCSSTT--TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred ECCeEEEEEEEccCCcc--ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 45899999998866432 3457899999999754 5889999999996 99999998752 2 7999999999
Q ss_pred CCC----ceeecCCCCCCcceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHHHHHHHHhCCCCc
Q 014294 271 SPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQILDRQPGLK 346 (427)
Q Consensus 271 ~~~----~~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l~~~~~~~~~~~~ 346 (427)
+++ +.|+|+. ...+|.|++++|+|+++.+.. .....+|+||||+++++|++++++|.+++.+...
T Consensus 83 ~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~-------~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--- 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTLC-------KEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL--- 151 (241)
T ss_dssp GGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEES-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE---
T ss_pred HHHcCCceEEEECc-cccEEEEEEeEEEECCeeEec-------cCCCEEEEECCCccccCCHHHHHHHHHHhCCeec---
Confidence 875 7899998 578999999999999976421 2246799999999999999999999999865421
Q ss_pred ccccCCCCceeeecCCCCccCceEEEEecCCcEEEECCCceEEEeCC--ceEEE-EEEeCCCCCCCCCCeEEEccccccc
Q 014294 347 MHTVEEQFSCFQFSKNVDDAFPTVTFKFKGSLSLTVYPHEYLFQIRE--DVWCI-GWQNGGLQNHDGRQMILLGGTVYSC 423 (427)
Q Consensus 347 ~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~ 423 (427)
....+.++| .....+|+|+|+| +|++|+||+++|+++..+ +..|+ +|...+.... ..+.||||++|||+
T Consensus 152 -~~g~~~~~C-----~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~-~~~~~ilG~~fl~~ 223 (241)
T 1lya_B 152 -IQGEYMIPC-----EKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPP-SGPLWILGDVFIGR 223 (241)
T ss_dssp -ETTEEEEEG-----GGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTT-TCCCEEECHHHHTT
T ss_pred -cCCcEEEEC-----CCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCC-CCCeEEechHHhcc
Confidence 111122455 4445799999999 899999999999998753 46898 6877653221 24579999999999
Q ss_pred ccC
Q 014294 424 FML 426 (427)
Q Consensus 424 ~yv 426 (427)
+|+
T Consensus 224 ~y~ 226 (241)
T 1lya_B 224 YYT 226 (241)
T ss_dssp EEE
T ss_pred eEE
Confidence 997
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.88 E-value=3.3e-23 Score=161.95 Aligned_cols=83 Identities=33% Similarity=0.615 Sum_probs=75.6
Q ss_pred CCCceEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCcccCCCCCCCCCcceecCCCcccCCcCC
Q 014294 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS----RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (427)
Q Consensus 78 ~~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 153 (427)
..+..|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 10 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~-------~~y~p~~SsT~~~~~----------- 71 (97)
T 1lya_A 10 YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH-------HKYNSDKSSTYVKNG----------- 71 (97)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS-------CCBCGGGCTTCEEEE-----------
T ss_pred CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC-------CCCCchhCCCceeCC-----------
Confidence 46789999999999999999999999999999999986 56543 789999999999975
Q ss_pred CCCCCCCCCCcceeeEEcCCCCeeeeeEEEEEEEEcc
Q 014294 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQ 190 (427)
Q Consensus 154 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~ 190 (427)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 -----------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 -----------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 89999999999 79999999999965
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.09 E-value=6e-11 Score=90.45 Aligned_cols=62 Identities=19% Similarity=0.425 Sum_probs=49.8
Q ss_pred CCCccCceEEEEecCCcEEEECCCceEEEeCC--ceEEE-EEEeCCCCCCCCCCeEEEcccccccccC
Q 014294 362 NVDDAFPTVTFKFKGSLSLTVYPHEYLFQIRE--DVWCI-GWQNGGLQNHDGRQMILLGGTVYSCFML 426 (427)
Q Consensus 362 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~i~~~~~~~~~~~~~~ilG~~fLr~~yv 426 (427)
+....+|+|+|+| +|++++|+|++|+++... +..|+ +|+..+.. ...+.||||++|||++|+
T Consensus 8 ~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~--~~~~~~ILGd~Fl~~~y~ 72 (87)
T 1b5f_B 8 NTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT--LLGPLWILGDVFMRPYHT 72 (87)
T ss_dssp GGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCB--SSSBEEEECHHHHTTEEE
T ss_pred CCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC--CCCCeEEechHHhccEEE
Confidence 4445799999999 899999999999998653 36898 68876532 124689999999999996
No 38
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=88.11 E-value=0.57 Score=35.49 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=24.5
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCCC
Q 014294 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNCAG 113 (427)
Q Consensus 84 ~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~ 113 (427)
++.|.|| .|.+.++||||.+++-+....
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5779999 699999999999999997643
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=87.38 E-value=0.53 Score=36.07 Aligned_cols=27 Identities=26% Similarity=0.180 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 014294 83 YFTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (427)
Q Consensus 83 Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~ 111 (427)
-++.|.|| .|.+.++||||.+++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 36789999 6999999999999999973
No 40
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=85.99 E-value=0.88 Score=34.41 Aligned_cols=27 Identities=22% Similarity=0.118 Sum_probs=24.1
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 014294 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNCA 112 (427)
Q Consensus 84 ~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~ 112 (427)
++.|.|| .|.+.++||||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 6779999 79999999999999999654
No 41
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=84.71 E-value=0.76 Score=35.51 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=25.9
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCceeEeCCCC
Q 014294 84 FTKVGLG---TPTDEYYVQVDTGSDLLWVNCAGC 114 (427)
Q Consensus 84 ~~~i~vG---tP~q~~~v~lDTGS~~~Wv~~~~C 114 (427)
.++|.|| +|+|.+..++|||.++|-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5667777 789999999999999999987543
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=81.99 E-value=1.2 Score=36.32 Aligned_cols=31 Identities=13% Similarity=0.218 Sum_probs=27.4
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~ 111 (427)
..+.+++++.|+ .+++.+++|||++.+-+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 457799999998 6899999999999998864
No 43
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=80.12 E-value=1.5 Score=34.23 Aligned_cols=25 Identities=20% Similarity=0.199 Sum_probs=22.5
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeC
Q 014294 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (427)
Q Consensus 84 ~~~i~vGtP~q~~~v~lDTGS~~~Wv~~ 111 (427)
++ |.|| .|.+.++||||.+++-+..
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 45 9999 6999999999999999975
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=77.25 E-value=2.3 Score=32.94 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=24.6
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCCC
Q 014294 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNCAG 113 (427)
Q Consensus 84 ~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~~ 113 (427)
.+.|.|| .|.+..+||||.+++-+....
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 6779999 799999999999999997644
No 45
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=76.19 E-value=2.8 Score=34.01 Aligned_cols=29 Identities=17% Similarity=0.433 Sum_probs=24.5
Q ss_pred EEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHH
Q 014294 293 VEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLV 334 (427)
Q Consensus 293 i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l 334 (427)
+.|||+.+. +++|||.+.+.++.+..+.+
T Consensus 31 v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEEE-------------EEEECCCCccccCHHHHHHc
Confidence 778998765 89999999999998876654
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=74.78 E-value=2.4 Score=34.63 Aligned_cols=32 Identities=13% Similarity=0.236 Sum_probs=27.6
Q ss_pred CCceEEEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 014294 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA 112 (427)
Q Consensus 79 ~~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~ 112 (427)
....|++++.|. .+++++++|||++.+.+...
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 356789999998 69999999999999999763
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=73.98 E-value=2.4 Score=34.62 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=27.2
Q ss_pred cceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHHHHHH
Q 014294 285 HYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLV 334 (427)
Q Consensus 285 ~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~~~l 334 (427)
.++|+ +.|||+.+. +++|||.+.+.++.+..+.+
T Consensus 24 ~l~v~---~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK-------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHT
T ss_pred EEEEE---EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHc
Confidence 34444 558998765 99999999999999887765
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=67.99 E-value=5.9 Score=31.58 Aligned_cols=31 Identities=16% Similarity=0.056 Sum_probs=26.3
Q ss_pred CceEEEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 014294 80 TGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA 112 (427)
Q Consensus 80 ~~~Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~ 112 (427)
...-++.+.|+ .|.+.++||||.+++-+...
T Consensus 20 ~~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 20 PPEPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp CCSSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred cCCCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 34557889999 69999999999999999764
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=63.43 E-value=6.8 Score=30.82 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=19.4
Q ss_pred eCCCCceEEEEEEcCCCceeEeCCC
Q 014294 89 LGTPTDEYYVQVDTGSDLLWVNCAG 113 (427)
Q Consensus 89 vGtP~q~~~v~lDTGS~~~Wv~~~~ 113 (427)
|| .|.+..+||||.+++-+....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 55 578899999999999998644
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=62.69 E-value=6.1 Score=33.99 Aligned_cols=27 Identities=19% Similarity=0.196 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 014294 83 YFTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (427)
Q Consensus 83 Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~ 111 (427)
-.+.|.|| .|.+.++||||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 36789999 7999999999999999964
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=56.06 E-value=9.3 Score=28.49 Aligned_cols=15 Identities=20% Similarity=0.713 Sum_probs=13.7
Q ss_pred EEEeccccccccCHH
Q 014294 315 TIIDSGTTLAYLPPM 329 (427)
Q Consensus 315 ~iiDSGts~~~lp~~ 329 (427)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 30 VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEeEc
Confidence 999999999999864
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.83 E-value=26 Score=30.04 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=24.4
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 014294 83 YFTKVGLGTPTDEYYVQVDTGSDLLWVNCA 112 (427)
Q Consensus 83 Y~~~i~vGtP~q~~~v~lDTGS~~~Wv~~~ 112 (427)
=.+++.|| .|.+..++|||.+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 37889999 69999999999999999653
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=37.12 E-value=29 Score=31.91 Aligned_cols=38 Identities=29% Similarity=0.284 Sum_probs=26.8
Q ss_pred eecCCCCCCcceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHH
Q 014294 276 TTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPML 330 (427)
Q Consensus 276 ~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~ 330 (427)
.+|+. .+..|.++ |+||.+.+. +++|||++.+++|..-
T Consensus 7 ~~~~~-~~~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 7 TTPQN-NDEEYLTP---VTVGKSTLH-------------LDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEECT-TTSCEEEE---EEEBTEEEE-------------EEEETTCCCEEEECTT
T ss_pred eEEcC-CCCEEEEE---EEECCEEEE-------------EEEeCCCccceEeeCC
Confidence 34543 45567544 778866554 8999999999998753
No 54
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=35.33 E-value=26 Score=26.50 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=26.2
Q ss_pred ceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHHH
Q 014294 286 YNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLY 331 (427)
Q Consensus 286 ~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~~ 331 (427)
|+=.+..+.|+|+... +++|||.-.+.+.....
T Consensus 6 ~~RP~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEEEHHHH
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEccccC
Confidence 4444566899999765 99999999999997655
No 55
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=34.35 E-value=24 Score=32.66 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=25.3
Q ss_pred ecCCCCCCcceEEEEEEEECC--EEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 277 TPMVPNMPHYNVILEEVEVGG--NPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 277 ~p~~~~~~~~~v~l~~i~v~~--~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
+|+......|.++ |.||. +.+. +++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~Q~~~-------------v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGSNKQQQT-------------VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEEE---EEETTTTEEEE-------------EEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcCCCcEEE-------------EEEeCCCCceEEecC
Confidence 3554345567554 77883 4433 899999999999854
No 56
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=33.79 E-value=25 Score=32.54 Aligned_cols=36 Identities=19% Similarity=0.458 Sum_probs=24.4
Q ss_pred cCCCCCCcceEEEEEEEEC--CEEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 278 PMVPNMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 278 p~~~~~~~~~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
|+......|.+ .|.|| .+.+. +++|||++.+++|..
T Consensus 6 ~l~~~~~~Y~~---~i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 6 TLINEGPSYAA---DIVVGSNQQKQT-------------VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEECSSSEEE---EEEETTTTEEEE-------------EEEETTCCCEEEEEE
T ss_pred EEecCCcEEEE---EEEEcCCCcEEE-------------EEEcCCCCCEEEecC
Confidence 44434445655 47788 34333 999999999999853
No 57
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=33.76 E-value=28 Score=32.19 Aligned_cols=36 Identities=25% Similarity=0.528 Sum_probs=24.1
Q ss_pred ecCCCCCCcceEEEEEEEEC--CEEeeCCCCCcccCCCCcEEEeccccccccCH
Q 014294 277 TPMVPNMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (427)
Q Consensus 277 ~p~~~~~~~~~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~ 328 (427)
+|+......|.+ .|+|| .+.+. ++||||++.+++|.
T Consensus 5 ~~l~n~~~~Y~~---~i~iGTP~q~~~-------------v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 5 VPATNQLVDYVV---NVGVGSPATTYS-------------LLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEECSSCEEE---EEEETTTTEEEE-------------EEEETTCCCCEECS
T ss_pred EeeeccCcEEEE---EEEECCCCcEEE-------------EEEeCCChhheecC
Confidence 344433345654 47888 34433 99999999999985
No 58
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=32.17 E-value=37 Score=26.88 Aligned_cols=26 Identities=27% Similarity=0.562 Sum_probs=21.8
Q ss_pred EEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCH
Q 014294 290 LEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (427)
Q Consensus 290 l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~ 328 (427)
+..+.|||+.+. +++|||...+.|+.
T Consensus 24 ~v~i~I~G~~~~-------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 24 RITLKVGGQPVT-------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEECS
T ss_pred EEEEEECCEEEE-------------EEEeCCCCeEEEcc
Confidence 445889998765 89999999999985
No 59
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=32.16 E-value=29 Score=26.02 Aligned_cols=30 Identities=17% Similarity=0.437 Sum_probs=24.0
Q ss_pred ceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCH
Q 014294 286 YNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (427)
Q Consensus 286 ~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~ 328 (427)
|+=.+..+.|+|+... +++|||.-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 4445667899999875 99999999888874
No 60
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=31.75 E-value=28 Score=32.28 Aligned_cols=36 Identities=22% Similarity=0.540 Sum_probs=24.2
Q ss_pred cCCCCCCcceEEEEEEEEC--CEEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 278 PMVPNMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 278 p~~~~~~~~~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
|+......|.+ .|+|| .+.+. +++|||++.+++|..
T Consensus 6 ~l~~~~~~Y~~---~i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 6 TLHNEAITYTA---DITVGSDNQKLN-------------VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEECSSCEEE---EEEETTTTEEEE-------------EEEETTCCCEEEEEE
T ss_pred EEecCCeEEEE---EEEECCCCcEEE-------------EEEeCCCCCeEEecC
Confidence 44333445655 47788 34433 999999999999854
No 61
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=30.01 E-value=38 Score=31.09 Aligned_cols=38 Identities=26% Similarity=0.417 Sum_probs=26.7
Q ss_pred eecCCCCCCcceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHH
Q 014294 276 TTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPML 330 (427)
Q Consensus 276 ~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~ 330 (427)
..|+. .+..|.+ .|+||.+.+. +++|||++.+++|..-
T Consensus 8 ~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 8 NTPTA-NDEEYIT---PVTIGGTTLN-------------LNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEECG-GGSCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTT
T ss_pred eeecC-CCCEEEE---EEEECCEEEE-------------EEEeCCCcceEEecCC
Confidence 34443 4455654 4778866554 8999999999999753
No 62
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=29.86 E-value=38 Score=26.17 Aligned_cols=30 Identities=20% Similarity=0.385 Sum_probs=25.1
Q ss_pred cceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCH
Q 014294 285 HYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (427)
Q Consensus 285 ~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~ 328 (427)
.|+=.+. +.|+|+.+. +++|||.-.+.+..
T Consensus 11 l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 5666677 999999875 99999999988874
No 63
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=29.67 E-value=35 Score=25.56 Aligned_cols=29 Identities=14% Similarity=0.423 Sum_probs=23.5
Q ss_pred ceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccC
Q 014294 286 YNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLP 327 (427)
Q Consensus 286 ~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp 327 (427)
|+=.+..+.|+|+.+. +++|||.-.+.+.
T Consensus 6 ~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 6 WKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred ccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 5555677999999876 8999999888873
No 64
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=28.76 E-value=41 Score=30.87 Aligned_cols=38 Identities=26% Similarity=0.364 Sum_probs=26.6
Q ss_pred eecCCCCCCcceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHHH
Q 014294 276 TTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPML 330 (427)
Q Consensus 276 ~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~ 330 (427)
..|+. .+..|.+ .|+||.+.+. +++|||++.+++|..-
T Consensus 8 ~~~~~-~~~~Y~~---~i~iG~q~~~-------------v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 8 TNPTS-NDEEYIT---QVTVGDDTLG-------------LDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEECG-GGCCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTT
T ss_pred eeEcC-CCCEEEE---EEEECCEEEE-------------EEEcCCCcceEEecCC
Confidence 34443 4455654 4778865554 8999999999999753
No 65
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=28.56 E-value=34 Score=31.58 Aligned_cols=32 Identities=25% Similarity=0.557 Sum_probs=22.7
Q ss_pred CCCcceEEEEEEEECC--EEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 282 NMPHYNVILEEVEVGG--NPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 282 ~~~~~~v~l~~i~v~~--~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
....|.++ |.||. +.+. +++|||++.+++|..
T Consensus 10 ~~~~Y~~~---i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 10 EQVTYAAD---ITVGSNNQKLN-------------VIVDTGSSDLWVPDV 43 (342)
T ss_dssp CSSSEEEE---EEETTTTEEEE-------------EEEETTCCCEEEEEE
T ss_pred CCcEEEEE---EEEcCCCcEEE-------------EEEECCCcceEEEcC
Confidence 44566554 77883 4333 899999999999854
No 66
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=27.98 E-value=63 Score=29.60 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=23.7
Q ss_pred CCCcceEEEEEEEEC--CEEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 282 NMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 282 ~~~~~~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
.+..|.+ .|.|| .+.+. +++|||++.+++|..
T Consensus 13 ~~~~Y~~---~i~iGTP~Q~~~-------------v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 13 LDDAYIT---PVQIGTPAQTLN-------------LDFDTGSSDLWVFSS 46 (329)
T ss_dssp TCCCEEE---EEEETTTTEEEE-------------EEEETTCCCEEECBT
T ss_pred CCCEEEE---EEEECCCCeEEE-------------EEECCCCCCeEEecC
Confidence 4556754 57888 44443 899999999999964
No 67
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=26.82 E-value=41 Score=30.98 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=23.5
Q ss_pred CCcceEEEEEEEECCEEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 283 MPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 283 ~~~~~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
+..|.++ |+||.+.+. +++|||++.+++|..
T Consensus 16 ~~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 16 NTQYAGI---TKIGNQNFL-------------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp CTTSEEE---EEETTEEEE-------------EEEETTCCCEEEECT
T ss_pred CCEEEEE---EEECCEEEE-------------EEEeCCCcceEEecC
Confidence 3457554 778866554 899999999999864
No 68
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=24.63 E-value=50 Score=28.77 Aligned_cols=15 Identities=27% Similarity=0.753 Sum_probs=13.7
Q ss_pred EEEeccccccccCHH
Q 014294 315 TIIDSGTTLAYLPPM 329 (427)
Q Consensus 315 ~iiDSGts~~~lp~~ 329 (427)
+++|||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 30 VIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcceEEEcC
Confidence 999999999999864
No 69
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=24.44 E-value=55 Score=30.00 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=25.0
Q ss_pred ecCCCCCCcceEEEEEEEECC--EEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 277 TPMVPNMPHYNVILEEVEVGG--NPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 277 ~p~~~~~~~~~v~l~~i~v~~--~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
.|+...+..|.++ |.||. +.+. +++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~q~~~-------------v~~DTGSs~lWv~~~ 43 (329)
T 1htr_B 5 EPMAYMDAAYFGE---ISIGTPPQNFL-------------VLFDTGSSNLWVPSV 43 (329)
T ss_dssp CGGGGTTCCEEEE---EEETTTTEEEE-------------EEEETTCCCEEEEBT
T ss_pred eeeEEcCCEEEEE---EEECCCCcEEE-------------EEEcCCCccEEEecC
Confidence 3444234466554 77884 3332 999999999999864
No 70
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=22.29 E-value=63 Score=29.60 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=23.9
Q ss_pred CCCcceEEEEEEEEC--CEEeeCCCCCcccCCCCcEEEeccccccccCHHH
Q 014294 282 NMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPML 330 (427)
Q Consensus 282 ~~~~~~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~~ 330 (427)
.+..|.+ .|+|| .+.+. +++|||++.+++|..-
T Consensus 13 ~~~~Y~~---~i~iGTP~Q~~~-------------v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 13 ADSEYIT---SVSIGTPAQVLP-------------LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp TCCCEEE---EEEETTTTEEEE-------------EEEETTCCCEEECBTT
T ss_pred CCCEEEE---EEEECCCCeEEE-------------EEEcCCCCCeEEecCC
Confidence 4456654 57888 44443 9999999999999753
No 71
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=21.64 E-value=60 Score=29.71 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=23.3
Q ss_pred CCCcceEEEEEEEEC--CEEeeCCCCCcccCCCCcEEEeccccccccCHH
Q 014294 282 NMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (427)
Q Consensus 282 ~~~~~~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDSGts~~~lp~~ 329 (427)
.+..|.+ .|+|| .+.+. +++|||++.+++|..
T Consensus 13 ~~~~Y~~---~i~iGTP~q~~~-------------v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 13 NDIEYYG---QVTIGTPGKKFN-------------LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTTEEEE---EEEETTTTEEEE-------------EEEETTCCCCEEEBT
T ss_pred CCCEEEE---EEEECCCCeEEE-------------EEEcCCCCCEEEccC
Confidence 4455654 47788 44443 899999999999864
No 72
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=20.21 E-value=85 Score=27.08 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=23.3
Q ss_pred ceEEE---EEEeCCC----CceEEEEEEcCCCceeEeCC
Q 014294 81 GLYFT---KVGLGTP----TDEYYVQVDTGSDLLWVNCA 112 (427)
Q Consensus 81 ~~Y~~---~i~vGtP----~q~~~v~lDTGS~~~Wv~~~ 112 (427)
+.|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 44544 5678752 34578999999999999874
Done!