BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>014295
MKETCVSFSSSSRYSAKISQVLHLDNAGIGIRRGRRSIVAASPPTEDAVVVTEPLTKEDL
VGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYI
IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQP
KWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLA
LQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALD
VPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEM
RGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVKERVNSSGWK
KAIQNVV

High Scoring Gene Products

Symbol, full name Information P value
GSH1
glutamate-cysteine ligase
protein from Arabidopsis thaliana 7.1e-187
SPO_3626
glutamate--cysteine ligase
protein from Ruegeria pomeroyi DSS-3 5.1e-122
gshA
Glutamate--cysteine ligase GshA
protein from Mycobacterium tuberculosis 8.8e-23
gshA
Glutamate--cysteine ligase GshA
protein from Mycobacterium smegmatis str. MC2 155 2.0e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014295
        (427 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2127173 - symbol:GSH1 "glutamate-cysteine liga...  1812  7.1e-187  1
TIGR_CMR|SPO_3626 - symbol:SPO_3626 "glutamate--cysteine ...  1200  5.1e-122  1
UNIPROTKB|O69672 - symbol:gshA "Glutamate--cysteine ligas...   280  8.8e-23   1
UNIPROTKB|A0R5N1 - symbol:gshA "Glutamate--cysteine ligas...   269  2.0e-21   1


>TAIR|locus:2127173 [details] [associations]
            symbol:GSH1 "glutamate-cysteine ligase" species:3702
            "Arabidopsis thaliana" [GO:0004357 "glutamate-cysteine ligase
            activity" evidence=IEA;IMP;IDA] [GO:0006750 "glutathione
            biosynthetic process" evidence=IEA;IMP;IDA;TAS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009908 "flower development"
            evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009753
            "response to jasmonic acid stimulus" evidence=IEP] [GO:0010193
            "response to ozone" evidence=IEP;RCA] [GO:0046686 "response to
            cadmium ion" evidence=IEP;IMP;RCA] [GO:0050832 "defense response to
            fungus" evidence=IMP] [GO:0002213 "defense response to insect"
            evidence=IMP] [GO:0019761 "glucosinolate biosynthetic process"
            evidence=IMP] [GO:0042742 "defense response to bacterium"
            evidence=IMP] [GO:0052544 "defense response by callose deposition
            in cell wall" evidence=IMP] [GO:0006007 "glucose catabolic process"
            evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
            [GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
            salt stress" evidence=RCA] [GO:0019344 "cysteine biosynthetic
            process" evidence=RCA] [GO:0030244 "cellulose biosynthetic process"
            evidence=RCA] [GO:0009536 "plastid" evidence=IDA] [GO:0009700
            "indole phytoalexin biosynthetic process" evidence=IMP] [GO:0009816
            "defense response to bacterium, incompatible interaction"
            evidence=IMP] InterPro:IPR006336 InterPro:IPR011556 Pfam:PF04107
            UniPathway:UPA00142 GO:GO:0005524 GO:GO:0046686 GO:GO:0009570
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009753 GO:GO:0050832
            GO:GO:0019761 GO:GO:0052544 GO:GO:0010193 GO:GO:0009408
            GO:GO:0002213 GO:GO:0009908 EMBL:AL031018 EMBL:AL161558
            GO:GO:0009816 GO:GO:0006750 GO:GO:0004357 BRENDA:6.3.2.2
            EMBL:Z29490 EMBL:Y09944 EMBL:AF068299 EMBL:DQ993178 EMBL:AF419576
            EMBL:AF428393 EMBL:AY056372 EMBL:AY143970 IPI:IPI00536188
            PIR:T05142 RefSeq:NP_001190808.1 RefSeq:NP_194041.1
            UniGene:At.25074 ProteinModelPortal:P46309 SMR:P46309 STRING:P46309
            PaxDb:P46309 PRIDE:P46309 EnsemblPlants:AT4G23100.1
            EnsemblPlants:AT4G23100.3 GeneID:828409 KEGG:ath:AT4G23100
            TAIR:At4g23100 eggNOG:COG3572 HOGENOM:HOG000009857
            InParanoid:P46309 KO:K01919 OMA:SIEPGGQ PhylomeDB:P46309
            ProtClustDB:PLN02611 BioCyc:ARA:AT4G23100-MONOMER
            BioCyc:MetaCyc:AT4G23100-MONOMER Genevestigator:P46309
            GO:GO:0009700 TIGRFAMs:TIGR01436 Uniprot:P46309
        Length = 522

 Score = 1812 (642.9 bits), Expect = 7.1e-187, P = 7.1e-187
 Identities = 342/410 (83%), Positives = 365/410 (89%)

Query:     1 MKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDL 60
             MKE   +F SS  YS  +S    L ++           VAASPPTE+AVV TEPLT+EDL
Sbjct:    40 MKE---AFGSS--YSRSLSTKSMLLHSVKRSKRGHQLIVAASPPTEEAVVATEPLTREDL 94

Query:    61 VGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYI 120
             + YLASGCK K+K+RIGTEHEKFGFE  TL PMKY+QIAELLN IAERF+WEKVMEGD I
Sbjct:    95 IAYLASGCKTKDKYRIGTEHEKFGFEVNTLRPMKYDQIAELLNGIAERFEWEKVMEGDKI 154

Query:   121 IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQP 180
             IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQP
Sbjct:   155 IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQP 214

Query:   181 KWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLA 240
             KW  +DIP+MPKGRY+IMRNYMPKVG+LGLDMM RTCTVQVNLDFSSEADMIRKFRAGLA
Sbjct:   215 KWRREDIPIMPKGRYDIMRNYMPKVGTLGLDMMLRTCTVQVNLDFSSEADMIRKFRAGLA 274

Query:   241 LQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALD 300
             LQPIATALFANSPFTEGKPNG+LSMRSHIWTDTD +R GMLPFVFDDSFGFEQYVDYALD
Sbjct:   275 LQPIATALFANSPFTEGKPNGFLSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALD 334

Query:   301 VPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEM 360
             VPMYF YRK KYIDC GM+FR FLAGKLPCLPGELP+ NDWENHLTTIFPEVRLKRYLEM
Sbjct:   335 VPMYFAYRKNKYIDCTGMTFRQFLAGKLPCLPGELPSYNDWENHLTTIFPEVRLKRYLEM 394

Query:   361 RGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKV 410
             RGADGGPWRRLCALPAFWVGLLYD+DSLQ +LD+TADWT  ER+MLRNKV
Sbjct:   395 RGADGGPWRRLCALPAFWVGLLYDDDSLQAILDLTADWTPAEREMLRNKV 444


>TIGR_CMR|SPO_3626 [details] [associations]
            symbol:SPO_3626 "glutamate--cysteine ligase"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004357
            "glutamate-cysteine ligase activity" evidence=ISS] [GO:0006750
            "glutathione biosynthetic process" evidence=ISS] InterPro:IPR006336
            InterPro:IPR011556 Pfam:PF04107 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0006750 GO:GO:0004357
            HOGENOM:HOG000009857 KO:K01919 OMA:SIEPGGQ TIGRFAMs:TIGR01436
            RefSeq:YP_168820.1 ProteinModelPortal:Q5LMD8 SMR:Q5LMD8
            GeneID:3195399 KEGG:sil:SPO3626 PATRIC:23380731
            ProtClustDB:CLSK934230 Uniprot:Q5LMD8
        Length = 456

 Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
 Identities = 216/358 (60%), Positives = 271/358 (75%)

Query:    54 PLTK-EDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYE---QIAELLNSIAERF 109
             P+ + E L  YLASGCKPK +WRIGTEHEKFGF   TL P+ +E    I  +L  + +R 
Sbjct:    10 PIERHEQLAEYLASGCKPKSEWRIGTEHEKFGFCKDTLKPLPFEGTRSIVAVLEGLRDRH 69

Query:   110 DWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEM 169
              W ++ EG  +IGL++   +ISLEPGG  ELSGAPLET+H+TC EVN+HL +VK +A+E+
Sbjct:    70 GWAEMREGGNLIGLQKDGANISLEPGGALELSGAPLETIHETCDEVNTHLREVKDIADEI 129

Query:   170 GIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEA 229
             G+GF+G+G  P W    +P+MPKGRY++M  YM KVG++G  MM RTCTVQVNLDF SEA
Sbjct:   130 GVGFIGLGAAPIWTHDQMPLMPKGRYKLMDAYMQKVGTMGTTMMRRTCTVQVNLDFGSEA 189

Query:   230 DMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSF 289
             DM++K R  +ALQP+ATALFANSPF EG+PNG+ S R+ +W D D +R GM+PF+FD+ F
Sbjct:   190 DMVQKLRVAIALQPVATALFANSPFFEGQPNGHKSWRARVWRDLDADRTGMVPFIFDEGF 249

Query:   290 GFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIF 349
             GFE +V YALDVPMYFVYR   YI+  G SFRDFL G+LP LPGE PTL+DW +HLTT+F
Sbjct:   250 GFESWVQYALDVPMYFVYRDGTYINALGQSFRDFLNGRLPALPGETPTLSDWADHLTTLF 309

Query:   350 PEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLR 407
             PE R+K+Y+EMRGADGGPWRRLCALPAFWVGL YD+ +L    D+   W    R+ LR
Sbjct:   310 PEARIKKYIEMRGADGGPWRRLCALPAFWVGLTYDQSALDAAWDLVKGWDAETRETLR 367


>UNIPROTKB|O69672 [details] [associations]
            symbol:gshA "Glutamate--cysteine ligase GshA" species:1773
            "Mycobacterium tuberculosis" [GO:0004357 "glutamate-cysteine ligase
            activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR006336 InterPro:IPR017809 Pfam:PF04107 GO:GO:0005886
            GO:GO:0005524 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR EMBL:BX842583 GO:GO:0006750 GO:GO:0004357
            KO:K01919 HOGENOM:HOG000068081 OMA:YHLSTLF ProtClustDB:CLSK872237
            TIGRFAMs:TIGR03444 PIR:A70794 RefSeq:NP_218221.1 RefSeq:NP_338360.1
            RefSeq:YP_006517194.1 ProteinModelPortal:O69672 SMR:O69672
            EnsemblBacteria:EBMYCT00000001964 EnsemblBacteria:EBMYCT00000071649
            GeneID:13317316 GeneID:885053 GeneID:926454 KEGG:mtc:MT3807
            KEGG:mtu:Rv3704c KEGG:mtv:RVBD_3704c PATRIC:18130132
            TubercuList:Rv3704c Uniprot:O69672
        Length = 432

 Score = 280 (103.6 bits), Expect = 8.8e-23, P = 8.8e-23
 Identities = 89/306 (29%), Positives = 134/306 (43%)

Query:   108 RFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAE 167
             R  WE++ E    +    G   +S+EPGG  ELSG P + +      +      +++   
Sbjct:    63 RPSWEEITEVLEWLSPLPGGSVVSVEPGGAVELSGPPADGVLAAIGAMTRDQAVLRSALA 122

Query:   168 EMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKV--GSLGLDMMFRTCTVQVNLDF 225
               G+G + +G  P      + V P  RY  M  +      G  G  MM  T  +QVNLD 
Sbjct:   123 NAGLGLVFLGADPL--RSPVRVNPGARYRAMEQFFAASHSGVPGAAMMTSTAAIQVNLDA 180

Query:   226 SSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVF 285
               +     + R   AL P   A+ ANSP   G+ +G+ S R  +W   D+ R G +    
Sbjct:   181 GPQEGWAERVRLAHALGPTMIAIAANSPMLGGRFSGWQSTRQRVWGQMDSARCGPILGAS 240

Query:   286 DDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMS----FRDFLAGKLPCLPGELPTLNDW 341
              D  G + +  YAL  P+  V R     D   ++    F D++ G++  L G   T+ D 
Sbjct:   241 GDHPGID-WAKYALKAPVMMV-RSPDTQDTRAVTDYVPFTDWVDGRV-LLDGRRATVADL 297

Query:   342 ENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLD----MTAD 397
               HLTT+FP VR +++LE+R  D  P     A+    V LL D  +    +D    +   
Sbjct:   298 VYHLTTLFPPVRPRQWLEIRYLDSVPDEVWPAVVFTLVTLLDDPVAADLAVDAVEPVATA 357

Query:   398 WTTGER 403
             W T  R
Sbjct:   358 WDTAAR 363


>UNIPROTKB|A0R5N1 [details] [associations]
            symbol:gshA "Glutamate--cysteine ligase GshA"
            species:246196 "Mycobacterium smegmatis str. MC2 155" [GO:0004357
            "glutamate-cysteine ligase activity" evidence=ISS]
            InterPro:IPR006336 InterPro:IPR017809 Pfam:PF04107 GO:GO:0005524
            EMBL:CP000480 EMBL:CP001663 GenomeReviews:CP000480_GR GO:GO:0006750
            GO:GO:0004357 eggNOG:COG3572 KO:K01919 RefSeq:YP_006570815.1
            RefSeq:YP_890469.1 ProteinModelPortal:A0R5N1 STRING:A0R5N1
            EnsemblBacteria:EBMYCT00000043653 GeneID:13427418 GeneID:4532453
            KEGG:msm:MSMEG_6250 PATRIC:18084743 HOGENOM:HOG000068081
            OMA:YHLSTLF ProtClustDB:CLSK872237
            BioCyc:MSME246196:GJ4Y-6249-MONOMER TIGRFAMs:TIGR03444
            Uniprot:A0R5N1
        Length = 423

 Score = 269 (99.8 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 82/268 (30%), Positives = 119/268 (44%)

Query:   102 LNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQ 161
             L++   R  W+++      +    G   I++EPGG  ELSG P +      A + +    
Sbjct:    51 LSNPTRRPSWDELSAVIADVPPLPGGSRITVEPGGAVELSGPPYDGPLAAVAALQADRAV 110

Query:   162 VKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSL--GLDMMFRTCTV 219
             ++A      +G + +G  P    +   V P  RY  M  +    G+   G  MM  T +V
Sbjct:   111 LRAEFARRNLGLVLLGTDPLRPTRR--VNPGARYSAMEQFFTASGTAEAGAAMMTATASV 168

Query:   220 QVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAG 279
             QVNLD         + R   AL P   A+ ANSP   G+  G+ S R  +W   D+ R G
Sbjct:   169 QVNLDAGPRDGWAERVRLAHALGPTMIAITANSPMLGGQFTGWCSTRQRVWGQLDSARCG 228

Query:   280 MLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLN 339
              +  V  D    E +  YAL  P+  V           + F D+  G+   L G  PT  
Sbjct:   229 PVLGVDGDDPASE-WARYALRAPVMLVNSPDAVPVTNWVPFADWADGRA-VLGGRRPTEA 286

Query:   340 DWENHLTTIFPEVRLKRYLEMRGADGGP 367
             D + HLTT+FP VR +R+LE+R  D  P
Sbjct:   287 DLDYHLTTLFPPVRPRRWLEIRYLDSVP 314


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      427       416   0.00081  118 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  284 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.00u 0.15s 32.15t   Elapsed:  00:00:01
  Total cpu time:  32.00u 0.15s 32.15t   Elapsed:  00:00:01
  Start:  Fri May 10 12:25:41 2013   End:  Fri May 10 12:25:42 2013

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