Query 014295
Match_columns 427
No_of_seqs 206 out of 1073
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 03:44:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014295.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014295hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02611 glutamate--cysteine l 100.0 2E-101 4E-106 796.6 39.9 392 25-416 19-410 (482)
2 TIGR01436 glu_cys_lig_pln glut 100.0 3.8E-93 8.2E-98 733.2 36.0 361 56-416 4-367 (446)
3 COG3572 GshA Gamma-glutamylcys 100.0 5E-84 1.1E-88 632.7 28.4 365 53-418 9-380 (456)
4 TIGR03444 gshA_related glutama 100.0 1E-79 2.2E-84 617.5 32.3 335 63-421 1-351 (390)
5 TIGR02050 gshA_cyan_rel unchar 100.0 1.3E-54 2.7E-59 427.6 23.9 246 75-385 1-252 (287)
6 PRK13517 carboxylate-amine lig 100.0 4.8E-54 1E-58 438.1 26.6 284 69-416 6-294 (373)
7 PRK13516 gamma-glutamyl:cystei 100.0 4.1E-52 8.8E-57 422.2 24.0 252 70-385 8-264 (373)
8 PRK13518 carboxylate-amine lig 100.0 1.6E-51 3.4E-56 413.8 26.1 249 72-384 11-264 (357)
9 PRK13515 carboxylate-amine lig 100.0 4.3E-50 9.2E-55 408.9 25.0 249 72-385 4-257 (371)
10 PF04107 GCS2: Glutamate-cyste 100.0 3.1E-52 6.7E-57 411.2 7.7 285 76-396 1-285 (288)
11 TIGR02048 gshA_cyano glutamate 100.0 6.6E-47 1.4E-51 384.0 23.3 234 75-382 2-246 (376)
12 COG2170 Uncharacterized conser 100.0 1E-44 2.2E-49 353.4 17.4 248 73-384 2-254 (369)
13 PRK02471 bifunctional glutamat 99.9 2.6E-27 5.7E-32 259.5 15.4 222 73-367 18-292 (752)
14 PRK02107 glutamate--cysteine l 98.6 5.4E-07 1.2E-11 95.2 15.1 154 73-255 20-203 (523)
15 TIGR01434 glu_cys_ligase gluta 98.6 7.9E-07 1.7E-11 93.8 14.0 153 74-255 17-199 (512)
16 PF04262 Glu_cys_ligase: Gluta 98.6 3.6E-07 7.9E-12 92.8 10.7 155 73-256 18-203 (377)
17 COG2918 GshA Gamma-glutamylcys 98.4 6.1E-06 1.3E-10 84.3 15.3 162 73-260 21-215 (518)
18 TIGR01435 glu_cys_lig_rel glut 98.3 6.4E-06 1.4E-10 90.7 13.9 156 74-256 8-188 (737)
19 PF03074 GCS: Glutamate-cystei 98.3 1.8E-06 4E-11 86.9 7.3 68 208-278 6-73 (371)
20 KOG3754 Gamma-glutamylcysteine 98.3 8.3E-06 1.8E-10 83.1 11.9 290 57-368 27-437 (640)
21 COG0174 GlnA Glutamine synthet 97.8 0.00072 1.6E-08 70.8 16.1 109 47-174 100-229 (443)
22 TIGR03105 gln_synth_III glutam 97.7 0.0039 8.5E-08 65.4 19.3 45 129-174 176-221 (435)
23 PRK09469 glnA glutamine synthe 97.6 0.0055 1.2E-07 64.9 19.4 46 128-174 208-255 (469)
24 PLN02284 glutamine synthetase 97.5 0.0035 7.7E-08 64.0 15.5 93 129-252 188-288 (354)
25 PLN03036 glutamine synthetase; 97.4 0.0028 6.1E-08 66.2 14.6 154 57-252 167-348 (432)
26 PF12224 Amidoligase_2: Putati 97.4 0.0096 2.1E-07 57.4 16.3 38 216-253 112-153 (252)
27 TIGR00653 GlnA glutamine synth 96.9 0.028 6.1E-07 59.5 15.6 46 128-174 200-246 (460)
28 PF00120 Gln-synt_C: Glutamine 96.7 0.017 3.7E-07 56.4 11.1 49 129-181 87-136 (259)
29 PF14395 COOH-NH2_lig: Phage p 88.8 2.1 4.7E-05 41.5 8.3 119 73-239 2-121 (261)
30 PF04107 GCS2: Glutamate-cyste 77.9 1.9 4.2E-05 42.6 3.1 37 347-383 214-257 (288)
31 KOG0683 Glutamine synthetase [ 60.9 14 0.0003 37.8 4.9 113 57-181 118-248 (380)
32 TIGR03686 pupylate_PafA protea 39.9 56 0.0012 34.6 5.5 71 75-153 3-75 (453)
33 TIGR00695 uxuA mannonate dehyd 31.0 2.4E+02 0.0052 29.5 8.5 54 147-203 204-262 (394)
34 PF03136 Pup_ligase: Pup-ligas 23.5 2.1E+02 0.0046 30.4 6.6 52 123-175 68-119 (444)
No 1
>PLN02611 glutamate--cysteine ligase
Probab=100.00 E-value=2e-101 Score=796.58 Aligned_cols=392 Identities=85% Similarity=1.408 Sum_probs=382.5
Q ss_pred cccccccccCcceeeecCCCCCCcccCCCCCCHHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChHHHHHHHHH
Q 014295 25 DNAGIGIRRGRRSIVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNS 104 (427)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~ 104 (427)
++....++|++++||+++|++++++++++++|+++|++||++|||++++++||+|+|+|+++.++++|++|++|.++|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~gck~~~~~~iG~E~E~f~~~~~~~~pv~y~~i~~lL~~ 98 (482)
T PLN02611 19 DSRRRTTRRGRSVIVAASPPTEEAVVATEPLTKEDLVAYLASGCKPKEKWRIGTEHEKFGFELATLRPMKYDQIAQLLEG 98 (482)
T ss_pred ccccccccccccceecCCCcchhhcccCCCCCHHHHHHHHHhcCCCCCCCeeEEeeeeeeccCCCCCCCCHHHHHHHHHH
Confidence 33445778999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred HhhccccchhccCccccccccCCceeeecCCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCC
Q 014295 105 IAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL 184 (427)
Q Consensus 105 l~~~~g~~~~~~~~~~igl~~e~~~itlEpg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~ 184 (427)
+.+++||++++|+|++||+.+++.+||+|||||||+|++||.+++++++++.+++++++++++++|+++++.|+||++++
T Consensus 99 l~~~~gw~~~~e~g~iIgl~~~g~~ITlEPGgQiElSt~p~~si~e~~~el~~~~~~l~~~a~~~Gl~l~g~G~hP~~~~ 178 (482)
T PLN02611 99 LAERFGWEKIMEGDNIIGLKQDGQSVSLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWSV 178 (482)
T ss_pred HHHhcCCceeccCCceecccCCCCceEecccceEEecccCcCCHHHHHHHHHHHHHHHHHHHHHcCCCeEccCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCcc
Q 014295 185 KDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLS 264 (427)
Q Consensus 185 ~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S 264 (427)
.+++++||+||+.|.+||+..|..|++||+.|||+|||||+++++++++++|.+++|+|+++|||||||||+|++|||+|
T Consensus 179 ~~~~i~pk~RY~~M~~y~~~~g~~g~~MM~~t~g~QVhvd~~seed~v~~~~~~~~l~Pvl~ALfANSPf~eG~~tG~~S 258 (482)
T PLN02611 179 ADIPIMPKGRYKIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEQDMVRKFRVGLALQPIATALFANSPFTEGKPNGYLS 258 (482)
T ss_pred ccccCCCChHHHHHHHHHHHhhhhhhhhccceEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCcCCCCcc
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhc
Q 014295 265 MRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENH 344 (427)
Q Consensus 265 ~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~h 344 (427)
+|+.+|+++|++|||++|+.|+++++|++|++|++++|||||+|+|.|+++.+.||+|||+++++.++|++||++||++|
T Consensus 259 ~R~~iW~~~D~~rtg~~P~~F~d~~~fe~yv~~~Ld~Pm~fv~r~g~~~~~~g~tFrd~~~g~~~~~~~~~pt~~D~~~H 338 (482)
T PLN02611 259 YRSHIWTDTDKDRTGMLPFVFDDDFGFERYVDYALDVPMYFVYRNGKYIDCTGMSFRDFMAGKLPQLPGELPTLNDWENH 338 (482)
T ss_pred hHHHHHHhcCCCCCCCCCCcCCChhHHHHHHHHHHCCCeEEEEeCCceecCCCCCHHHHHcCcCccCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred ccCCCCCCcccceEeeecCCCCchhhhhHHHHHHHHhccChhhhhhHHHhhcCCcHHHHHHHHHHHHHhcCC
Q 014295 345 LTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVKERVNS 416 (427)
Q Consensus 345 lstifp~vR~~~~IEiR~~Da~P~~~~~A~~Al~~GLl~~~~~l~~~~~~~~~~~~~~r~~L~~~~~~~~~~ 416 (427)
+||+||+||+|+|||||++|+||+.++||++|||+|||||+++++.+++++++|+.++|.+||+++++.|++
T Consensus 339 LSt~FP~VRlK~~lE~R~aDa~P~~~~~a~~A~~~GLlyd~~al~~a~~l~~~w~~~~r~~lr~~~~~~Gl~ 410 (482)
T PLN02611 339 LTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEESLQSALDMIADWTPEEREMLRNKVPKTGLK 410 (482)
T ss_pred HhcCCCCccccceEEeccccCCChhhhhhHHHHHHHHhcCHHHHHHHHHHhhcCCHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999994
No 2
>TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase, plant type. This model represents one of two highly dissimilar forms of glutamate--cysteine ligase (gamma-glutamylcysteine synthetase), an enzyme of glutathione biosynthesis. The other type is modeled by TIGR01434. This type is found in plants (with a probable transit peptide), root nodule and other bacteria, but not E. coli and closely related species.
Probab=100.00 E-value=3.8e-93 Score=733.22 Aligned_cols=361 Identities=83% Similarity=1.411 Sum_probs=354.0
Q ss_pred CHHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChHH---HHHHHHHHhhccccchhccCccccccccCCceeee
Q 014295 56 TKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQ---IAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISL 132 (427)
Q Consensus 56 ~~~~l~~~~~~~~~~~~~~~iGvE~E~~lvd~~t~~~~~~~~---i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itl 132 (427)
++++|++||++|||+++.++||+|+|+|+++.+|++|++|.+ |.++|+.+..++||++++|+|++||+.+++.+||+
T Consensus 4 ~~~~l~~~~~~g~k~~~~~~iG~E~E~f~~~~~~~~~~~y~~~~gi~~~l~~l~~~~g~~~~~e~g~~i~l~~~~~~itl 83 (446)
T TIGR01436 4 SRDDLIAYLAAGCKPKEQWRIGTEHEKFGFEKNTLRPMKYEQKGGIAELLNGIAERFGWQKVMEGDKIIGLKQDKQSISL 83 (446)
T ss_pred cHHHHHHHHHhCCCcCCCCceEeeeeeeeeecCCCCCCCCCCchhHHHHHHHHHhhcCCceeccCCceeeecCCCCeEEE
Confidence 599999999999999999999999999999999999999974 99999999989999999999999999999999999
Q ss_pred cCCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhh
Q 014295 133 EPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDM 212 (427)
Q Consensus 133 Epg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~ 212 (427)
|||+|||+|++||.+++++++++.+++++++++++++|++++++|+||++++.+++++||+||+.|.++|+..|..|++|
T Consensus 84 EPggQlElS~~p~~~i~e~~~~l~~~~~~l~~~a~~~Gl~l~~~G~~P~~~~~~~~~~pk~RY~~M~~~~~~~G~~g~~m 163 (446)
T TIGR01436 84 EPGGQFELSGAPLETIHETCDEINSHLYQVKEVAEEMGIGFLGLGFQPKWRREDIPLMPKGRYDIMRNYMPKVGKLGLDM 163 (446)
T ss_pred cCcCeEEecccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEecCCCCCCCcccCCCCCchHHHHHHHHHhhcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999988999999999999999998888999999
Q ss_pred hcccceeEeecCCCCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHH
Q 014295 213 MFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFE 292 (427)
Q Consensus 213 m~~t~s~qVhld~~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e 292 (427)
|+.|||+|||||+++++++++++|++++|+|+++|||||||||+|++|||+|+|+.+|+++||+|||.+|+.|+++++|+
T Consensus 164 m~~t~g~qVhld~~~e~d~v~~~~~~~~l~Pvl~ALfANSPf~~G~~tG~~S~R~~iW~~~Dp~rtG~~P~~f~~~~~fe 243 (446)
T TIGR01436 164 MLRTCTVQVNLDFSSEADMVRKFRASLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPDRTGMLPFVFDDSFGFE 243 (446)
T ss_pred hHhheeEEEeeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCCCccchHHHHHHhcCCCcCCCCCCCCCCcccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceeeEeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCcccceEeeecCCCCchhhhh
Q 014295 293 QYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLC 372 (427)
Q Consensus 293 ~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~~~IEiR~~Da~P~~~~~ 372 (427)
+|+++++++||||+.++|.|+++.+++|+|||+++++.++|+.||++||.+|+||+||+||+|+|||+|++|++|+.+++
T Consensus 244 ~y~~~lld~Pm~~v~r~g~~~~~~g~~f~d~l~g~~~~~~g~~p~~~D~~~HlSt~FpeVRlk~~lE~R~aD~~p~~~~~ 323 (446)
T TIGR01436 244 RYVDYALDVPMYFAYRKGKYIDCTGMTFRAFLAGKLPALPGELPTLNDWENHLSTIFPEVRLKRYLEMRGADGGPWRRLC 323 (446)
T ss_pred HHHHHHhhCCeEEEecCCceecCCCCcHHHHhhCcCcccCCCCCCchhHHHHhhccCCCceeCCeEEecccccCChhhhh
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccChhhhhhHHHhhcCCcHHHHHHHHHHHHHhcCC
Q 014295 373 ALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVKERVNS 416 (427)
Q Consensus 373 A~~Al~~GLl~~~~~l~~~~~~~~~~~~~~r~~L~~~~~~~~~~ 416 (427)
|++|||+|||||+++++.+++++++|..+++.+|++.+++++++
T Consensus 324 a~~Al~~gLlyd~~al~~a~~l~~~w~~~~~~~l~~~~~~~gl~ 367 (446)
T TIGR01436 324 ALPAFWVGLLYDEDLLQAALDLTKDWSPAEREMLRNEVPVTGLK 367 (446)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999997
No 3
>COG3572 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=100.00 E-value=5e-84 Score=632.75 Aligned_cols=365 Identities=63% Similarity=1.116 Sum_probs=353.1
Q ss_pred CCCC-HHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChHH---HHHHHHHHhhccccchhccCcccccccc--C
Q 014295 53 EPLT-KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYEQ---IAELLNSIAERFDWEKVMEGDYIIGLKQ--G 126 (427)
Q Consensus 53 ~~~~-~~~l~~~~~~~~~~~~~~~iGvE~E~~lvd~~t~~~~~~~~---i~~lL~~l~~~~g~~~~~~~~~~igl~~--e 126 (427)
.++| ++.|.+|+++|+|+++.++||+|+|+|.+-.++..|+|+.+ |..+|..+. ++||+++++.|++|++.. +
T Consensus 9 ~~~t~~~~L~~~~a~g~k~~~~~riGtEhEkf~f~l~g~~pv~~e~e~~i~a~L~g~~-r~gwepI~d~gn~I~L~~p~g 87 (456)
T COG3572 9 TPLTSVAELTDYLAKGDKEKTDWRIGTEHEKFGFYLDGLSPVPYEGEAGIFALLDGMQ-RLGWEPIMDVGNIIGLVEPIG 87 (456)
T ss_pred cccchHHHHHHHhccCCCcchhhcccchhcccceeecCCCCCCcccccchHHHhhhhh-hcCceeeccccceeeeccCCC
Confidence 4677 99999999999999999999999999999887678999974 889999887 689999999999999998 8
Q ss_pred CceeeecCCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhccccc
Q 014295 127 KQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVG 206 (427)
Q Consensus 127 ~~~itlEpg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g 206 (427)
+..|++|||+|+|+|++|.+++++++.+.++++..++++|++.|++++++|.||.+...+.+++||+||++|.+||.++|
T Consensus 88 ~~aIslEpggq~Elsgapletihq~~~e~n~hlavlr~~a~~~gl~fvGlG~~Pkw~r~e~p~mpk~RY~iM~~Ympkvg 167 (456)
T COG3572 88 QGAISLEPGGQFELSGAPLETIHQTCGEMNQHLAVLREIAAELGLGFVGLGGSPKWTRAEVPVMPKSRYAIMTRYMPKVG 167 (456)
T ss_pred CceEEeccCceEEecCCchHHHHHHHHHHHHHHHHHHHHHHhcCCceEeecCCCccccCcCCCCCchHHHHHHHHHhhcC
Confidence 89999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred chhhhhhcccceeEeecCCCCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCC
Q 014295 207 SLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFD 286 (427)
Q Consensus 207 ~~g~~~m~~t~s~qVhld~~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~ 286 (427)
..|.+||..||++|||||+++++++++++|..++|.|+.+||||||||.+|+++||.|||..+|++.+|.|||.+|+.|.
T Consensus 168 ~~glDMm~rtctiQVNLD~sse~dm~rk~rvs~~Lqp~ataLFANSpFtegkpng~lS~R~~iW~dtd~~r~G~l~~~f~ 247 (456)
T COG3572 168 VKGLDMMTRTCTIQVNLDFSSETDMRRKMRVSLALQPLATALFANSPFTEGKPNGLLSWRGDIWRDTDPQRSGVLPFAFS 247 (456)
T ss_pred CcchhhhhhhheeEEeeccCcchhHHHHHHHHhhhhHHHHHHHccCCccCCCCccchhhhhhhhhccCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHhcCceeeEeecCccccCCCCcHHHhhhCCCC-CCCCCCCChhhhhhcccCCCCCCcccceEeeecCCC
Q 014295 287 DSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLP-CLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADG 365 (427)
Q Consensus 287 s~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~l~~~~~-~~~g~~ptl~dl~~hlstifp~vR~~~~IEiR~~Da 365 (427)
+.++|.+|++|++++||+|+.|.+.|.++.+.+|++|+.+.++ .++|..||..||.+|+||+||+||+|++||||++|+
T Consensus 248 d~fgf~dY~~~aldvpmyfv~r~~~y~d~~~~sfr~f~~gal~gel~~~~pt~~D~~~HlstlFpdVrlk~~lEmRgad~ 327 (456)
T COG3572 248 DDFGFIDYVNYALDVPMYFVRRTGHYHDCAHVSFRQFMAGALKGELPGRRPTMKDWTNHLSTLFPDVRLKRFLEMRGADS 327 (456)
T ss_pred CCCCHHHHHHHhhcCcEEEeccCCceeccceeeHHHHhccccccccccccCchhhhhhhhhhcCCCcchhceeEeecccC
Confidence 9999999999999999999999999999999999999999877 578999999999999999999999999999999999
Q ss_pred CchhhhhHHHHHHHHhccChhhhhhHHHhhcCCcHHHHHHHHHHHHHhcCChh
Q 014295 366 GPWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVKERVNSSG 418 (427)
Q Consensus 366 ~P~~~~~A~~Al~~GLl~~~~~l~~~~~~~~~~~~~~r~~L~~~~~~~~~~~~ 418 (427)
+|++.+||++|||+|||||+++++.+++++++|..+++..||+.|++.++.++
T Consensus 328 gP~~r~cAlpAfwvGLLyd~~aLdAa~dl~~~~~~~e~~alR~~vp~~~l~~~ 380 (456)
T COG3572 328 GPWRRICALPAFWVGLLYDPEALDAAEDLTKDWTYEEVLALRNAVPKKGLAAE 380 (456)
T ss_pred CCchhhhhhHHHHHHHhcCHHHHHHHHHhcccchHHHHHHHHHhcchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999644
No 4
>TIGR03444 gshA_related glutamate--cysteine ligase family protein. Members of this bacterial protein family bear homology to glutamate--cysteine ligase, an enzyme in the two-step pathway of glutathione (GSH) biosynthesis, but are distinctly different. Among the bacterial genomes that carry the uncharacterized methyltransferase (TIGR03438) and conserved hypothetical protein TIGR03440, this protein is found in a subset, always in the vicinity of these other genes. Conserved hypothetical protein TIGR03442 is found in these same genomes. The role of this cassette is probably biosynthetic, but the product is unknown.
Probab=100.00 E-value=1e-79 Score=617.46 Aligned_cols=335 Identities=30% Similarity=0.461 Sum_probs=298.2
Q ss_pred HHHcCC-CCCCCCeeEEEecccccc--------CCC-CCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeee
Q 014295 63 YLASGC-KPKEKWRIGTEHEKFGFE--------FGT-LHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISL 132 (427)
Q Consensus 63 ~~~~~~-~~~~~~~iGvE~E~~lvd--------~~t-~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itl 132 (427)
|+..+| |.+++.++|+|+||++|| ..+ ..+++.+++..++..+.. +..+.+.+||+
T Consensus 1 ~~~~~c~~~gp~~~~g~e~ew~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~lp~g~~iTl 66 (390)
T TIGR03444 1 YIGGVCFKDGPPGLVGLELEWLTVQTPAAHCPDLAAPTRRPSPHRIRAVIPGSPA--------------PPLPGGSRITV 66 (390)
T ss_pred CCcccccCCCCCceeeEEEEeeeccccccccCCCCCccCCCChHHHHhhhccccC--------------CCCCCCCeEEe
Confidence 456778 577889999999999444 332 234555545555443211 12466789999
Q ss_pred cCCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcc-cccchhhh
Q 014295 133 EPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMP-KVGSLGLD 211 (427)
Q Consensus 133 Epg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~-~~g~~g~~ 211 (427)
|||||||+|++|+.+++++++++.+++++++++++++|++|+++|+||+.. +++++||+||++|.++|+ +.|..|++
T Consensus 67 EPGgQvELSt~P~~sl~el~~el~~~l~~l~~~a~~~Gl~lva~G~~P~~~--~~~itpk~RY~~M~~~~~~~~G~~G~~ 144 (390)
T TIGR03444 67 EPGGQLELSGPPADGLTAAVAALAADLAVLRAALAEDGLALVGLGADPLRP--PRRVLPGPRYRAMEQFFATGIGPFGAL 144 (390)
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeccCCCCC--ccCCCchHHHHHHHHHhhhccCchHHH
Confidence 999999999999999999999999999999999999999999999999955 678999999999999997 77899999
Q ss_pred hhcccceeEeecCCC-CHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCc-h
Q 014295 212 MMFRTCTVQVNLDFS-SEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDS-F 289 (427)
Q Consensus 212 ~m~~t~s~qVhld~~-~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~-~ 289 (427)
||++|||+|||||+. +++|+.+++|.++.++|+++|||||||||+|++|||+|+|+.+|+++|++||| |..|.+. +
T Consensus 145 MM~~tasVQV~ld~~~~e~D~~~k~rva~aL~PvLlALfANSPf~~Gr~tG~~S~R~~iW~~~d~~Rtg--p~~~~~~~~ 222 (390)
T TIGR03444 145 MMCSTASVQVNLDAGTDPAEWAERWRLAHALGPVLIAAFANSPALGGRPTGWRSTRQRVWGQLDAARTG--PVLAASGDD 222 (390)
T ss_pred HhhCceeEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCCCchhhHHHHHhhCCCCCCC--CCCCCCCCC
Confidence 999999999999999 48999999999999999999999999999999999999999999999999998 5566665 7
Q ss_pred hHHHHHHHHhcCceeeEe--ecCccccCC-CCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCcccceEeeecCCCC
Q 014295 290 GFEQYVDYALDVPMYFVY--RKKKYIDCA-GMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGG 366 (427)
Q Consensus 290 ~~e~y~~~ll~~p~i~v~--r~~~~~~~~-~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~~~IEiR~~Da~ 366 (427)
.|++|++|+|++|||||+ ++|++++.+ +.||+|||.+ ++..+|++||.+||+||+||+||+||+|+|||||++|+|
T Consensus 223 ~~~~ya~y~Ld~P~~~v~~~~~g~~~~~~~g~tF~d~~~g-~~~~~~~~pt~~D~~~HLsTlFP~VR~k~~lEiR~~Da~ 301 (390)
T TIGR03444 223 PADDWARYALDAPLMCVRNPDDGEPVPVTDGVTFADWVAG-RDPVIGRRPTRADLDYHLTTLFPPVRPRGWLELRYLDAQ 301 (390)
T ss_pred cHHHHHHHHhCCCeEEEEECCCCceeeCCCCcCHHHHHcc-CcccCCCCCCHHHHHHHHhccCCCccccceeEeecccCC
Confidence 899999999999999999 788888887 7999999998 556789999999999999999999999999999999999
Q ss_pred chhhhhHHHHHHHHhccChhhhhhHHHhhcCCcHHHHHHHHHHHHHhcCChhhHh
Q 014295 367 PWRRLCALPAFWVGLLYDEDSLQNVLDMTADWTTGERQMLRNKVKERVNSSGWKK 421 (427)
Q Consensus 367 P~~~~~A~~Al~~GLl~~~~~l~~~~~~~~~~~~~~r~~L~~~~~~~~~~~~~~~ 421 (427)
|+..++|++|||+|||||+++++.++++++.| +++ +..+.+.||.++.++
T Consensus 302 p~~~~~a~~A~~~gLlyD~~al~~a~~~~~~~--~~~---~~~a~r~gl~~~~l~ 351 (390)
T TIGR03444 302 PGDGWPVPVATLTALLDDPVAAAEAAEAAAPV--ATR---WDDAARLGLADRELR 351 (390)
T ss_pred ChhhcchHHHHHHHHhcCHHHHHHHHHHHHHH--HHH---HHHHHHhccCChHHH
Confidence 99999999999999999999999999999999 555 899999999876544
No 5
>TIGR02050 gshA_cyan_rel uncharacterized enzyme. This family represents a division of a larger family, the other branch of which is predicted to act as glutamate--cysteine ligase (the first of two enzymes in glutathione biosynthesis) in the cyanobacteria. Species containing this protein, however, are generally not believe to make glutathione, and the function is unknown.
Probab=100.00 E-value=1.3e-54 Score=427.57 Aligned_cols=246 Identities=23% Similarity=0.271 Sum_probs=222.6
Q ss_pred eeEEEeccccccCCCCCCCChHHHH-HHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHHH
Q 014295 75 RIGTEHEKFGFEFGTLHPMKYEQIA-ELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQTC 152 (427)
Q Consensus 75 ~iGvE~E~~lvd~~t~~~~~~~~i~-~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l~ 152 (427)
++|||+|+++||++|+++++.+ . ++|+.+.+..+ ..|+.| ..+|||++|+||.++.++.
T Consensus 1 t~GvE~E~~lvD~~t~~~~~~~--~~~~l~~~~~~~~-----------------~~~~~El~~~qiEi~t~p~~~~~~l~ 61 (287)
T TIGR02050 1 TLGVEEELLLVDPHTYDLAASA--SAVLIGACREKIG-----------------AGFKHELFESQVELATPVCTTLAEAA 61 (287)
T ss_pred CceeeeeeeeEcCCccCcCccC--hHHHHHhhhhhcc-----------------cccChhhhccEEEecCCCcCCHHHHH
Confidence 6899999999999999998776 5 77776543211 126666 3699999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCHHHHH
Q 014295 153 AEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMI 232 (427)
Q Consensus 153 ~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~~v 232 (427)
++|.+.++.++++|+++|++|++.|+||+..+.+.+++|++||+.|.+++ |..+++|| +||+||||+++|+++++
T Consensus 62 ~~l~~~~~~l~~~a~~~g~~l~~~G~hP~~~~~~~~~~~~~RY~~m~~~~---g~~~~~~~--~~g~hVhv~v~d~~~~i 136 (287)
T TIGR02050 62 AQIRAVRARLVQAASDHGLRICGAGTHPFARWRRQEVADNPRYQRLLERY---GYVARQQL--VFGLHVHVGVPSPDDAV 136 (287)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCccCCCCcHHHHHHHHHHH---HHHHHhHc--eeeEEEEeCCCCHHHHH
Confidence 99999999999999999999999999999999899999999999999987 56789999 99999999999999999
Q ss_pred HHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecCcc
Q 014295 233 RKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKY 312 (427)
Q Consensus 233 ~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~ 312 (427)
+++|.++.++|+++|||||||||+|++|||+|+|+.+|+++| ++| +|+.|++|++|++|++.+++.++|
T Consensus 137 ~~~n~l~~~lP~llALsANSPf~~G~dtg~~s~R~~i~~~~p--~~G-~p~~f~~~~~y~~~~~~l~~~g~i-------- 205 (287)
T TIGR02050 137 AVLNRLLPWLPHLLALSASSPFWQGFDTGYASYRRNIFQAWP--TAG-LPPAFGSWDAFEAYFADLLETGVI-------- 205 (287)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccCcCCchHHHHHHHHHhCC--CCC-CCCcCCCHHHHHHHHHHHHHcCCc--------
Confidence 999999999999999999999999999999999999999999 666 577999999999999999887654
Q ss_pred ccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCccc---ceEeeecCCCCc-hhhhhHHHHHHHHhccCh
Q 014295 313 IDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRGADGGP-WRRLCALPAFWVGLLYDE 385 (427)
Q Consensus 313 ~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~---~~IEiR~~Da~P-~~~~~A~~Al~~GLl~~~ 385 (427)
.|.+++||||||+ +|||+|++|+|| ..++++++||+.||+...
T Consensus 206 ------------------------------~~~~~iww~vRp~~~~~tvE~Rv~D~~~~~~~~~~~aal~~~Lv~~~ 252 (287)
T TIGR02050 206 ------------------------------DDDGDLWWDIRPSPHFGTVEVRVADTCLNLEHAVAIAALIRALVEWL 252 (287)
T ss_pred ------------------------------CCCCeeEEEeccCCCCCCeeEEcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1478999999998 799999999999 799999999999997654
No 6
>PRK13517 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=4.8e-54 Score=438.06 Aligned_cols=284 Identities=20% Similarity=0.190 Sum_probs=244.5
Q ss_pred CCCCCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCC
Q 014295 69 KPKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLET 147 (427)
Q Consensus 69 ~~~~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~ 147 (427)
+.++.++||||+|+++||++|+++++.. .++|+.+... ..+..|+.| .++|||++|+||.+
T Consensus 6 ~~~~~~tiGvE~E~~lVD~~t~~~~~~~--~~vl~~~~~~----------------~~~~~i~~El~~~qiEi~t~p~~~ 67 (373)
T PRK13517 6 AGSPRPTLGVEWELLLVDPETGELSPRA--AEVLAAAGED----------------DEGPHLQKELLRNTVEVVTGVCDT 67 (373)
T ss_pred CCCCCCeeEeeeeEeeECCCcCCcCccH--HHHHHhcccc----------------cCCCcccccccCCEEEECCCCCCC
Confidence 3556889999999999999899999887 7888865331 124578888 58999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCC
Q 014295 148 LHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSS 227 (427)
Q Consensus 148 l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~ 227 (427)
+.++.++|.+.++.+.++|+++|++|+++|+||+.++.+.+++|++||+.|.+++ |..+++|| +||+||||++++
T Consensus 68 ~~el~~~L~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~~~~---~~~~~~~~--~~g~hVhv~v~~ 142 (373)
T PRK13517 68 VAEARADLRRTRALARRAAERRGARLAAAGTHPFSDWSEQPVTDKPRYAELIERT---QWWARQQL--ICGVHVHVGVPS 142 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEEEeeCCCCCCCCccCCCCCchHHHHHHHHH---HHHHHhhe--eeeeEEEeCCCC
Confidence 9999999999999999999999999999999999988888999999999999987 56789999 999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEe
Q 014295 228 EADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVY 307 (427)
Q Consensus 228 ~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~ 307 (427)
.+++++++|+++.++|+++|||||||||+|++|||+|+|+.+|+++| ++++|+.|++++.|++|++++++.++|
T Consensus 143 ~~~~i~~~n~l~~~lP~llALsAnSPf~~G~dtg~~S~R~~~~~~~p---~~G~p~~f~s~~~y~~~v~~l~~~g~i--- 216 (373)
T PRK13517 143 REKVVPVINRLRPWLPHLLALSANSPFWRGEDTGYASNRAMLFQQLP---TAGPPPQFGSWAEYEAYVADLLKTGVI--- 216 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhcCCCCcchhHHHHHHHhCC---CCCCCccCCCHHHHHHHHHHHHHcCCc---
Confidence 99999999999999999999999999999999999999999999999 455788899999999999999765433
Q ss_pred ecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCccc---ceEeeecCCCCc-hhhhhHHHHHHHHhcc
Q 014295 308 RKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRGADGGP-WRRLCALPAFWVGLLY 383 (427)
Q Consensus 308 r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~---~~IEiR~~Da~P-~~~~~A~~Al~~GLl~ 383 (427)
.|.+++||+|||+ +|||||++|+|| ..++++++||+.||++
T Consensus 217 -----------------------------------~~~~~iwwdvRp~~~~~tiEiRv~D~~~~~~~~~~~aal~~~Lv~ 261 (373)
T PRK13517 217 -----------------------------------LDEGMVYWDIRPSPKLGTVEVRVADVCLTLRELVALAALVRCLVV 261 (373)
T ss_pred -----------------------------------CCCCceEEecccCCCCCceeEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 3689999999999 589999999999 7899999999999998
Q ss_pred ChhhhhhHHHhhcCCcHHHHHHHHHHHHHhcCC
Q 014295 384 DEDSLQNVLDMTADWTTGERQMLRNKVKERVNS 416 (427)
Q Consensus 384 ~~~~l~~~~~~~~~~~~~~r~~L~~~~~~~~~~ 416 (427)
.....-...+....+.......-+-+..+.|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~n~wrAar~Gl~ 294 (373)
T PRK13517 262 TADRRLDAGEPLPTLPPWHVQENKWRAARYGLD 294 (373)
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHhcCCC
Confidence 653222222333455555555555666666665
No 7
>PRK13516 gamma-glutamyl:cysteine ligase; Provisional
Probab=100.00 E-value=4.1e-52 Score=422.23 Aligned_cols=252 Identities=18% Similarity=0.197 Sum_probs=225.3
Q ss_pred CCCCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCH
Q 014295 70 PKEKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETL 148 (427)
Q Consensus 70 ~~~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l 148 (427)
.++++++|||+|++|||++|+.+++.+ .++|+.+.+. .-+..|+.| ..+|||++|+||.++
T Consensus 8 ~~~~~t~GvE~E~~LVD~~t~~~~~~~--~~vl~~~~~~----------------~~~~~v~~El~~~qIEi~T~p~~~~ 69 (373)
T PRK13516 8 VSEPFTLGVELELQLVNPHDYDLTQDS--SDLLRAVKNQ----------------PTAGEIKPEITESMIEIATGVCRDI 69 (373)
T ss_pred CCCCCeeEEEEEEEeEcCCCcCcCccH--HHHHHhcccc----------------ccccccChhhhCceEEEcCCCCCCH
Confidence 456789999999999999999998877 7888765431 002357778 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCH
Q 014295 149 HQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSE 228 (427)
Q Consensus 149 ~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~ 228 (427)
.++.++|.+.++.++++|+++|++|+++|+||+..+.+.+++|++||+.|.+.| |..+++++ +||+||||++++.
T Consensus 70 ~el~~eL~~~r~~l~~~A~~~G~~lva~GthP~~~~~~~~it~~~RY~~l~~~~---~~~~~~~~--i~G~HVHvg~~d~ 144 (373)
T PRK13516 70 DQALGQLSAMRDVLVQAADKLNIGICGGGTHPFQQWQRQRICDNPRFQYLSELY---GYLAKQFT--VFGQHVHIGCPSG 144 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCEEEeecCCCCCCccccCCCCcHHHHHHHHHh---hhhhhhhe--eeeeEEEeCCCCH
Confidence 999999999999999999999999999999999988888999999999999988 45577766 8999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEee
Q 014295 229 ADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYR 308 (427)
Q Consensus 229 ~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r 308 (427)
+++++++|.+..|+|+|+|||||||||+|+||||+|||..+|++|| ++|. |+.|.+|.+|++|++.++++++|.
T Consensus 145 ~~av~~~~~l~~~lP~llALsAsSPf~~G~dTG~~S~R~~~~~~~P--~~G~-pp~~~~~~~y~~~~~~l~~~G~i~--- 218 (373)
T PRK13516 145 DDALYLLHGLSRYVPHFIALSASSPYVQGVDTGFASARLNSVSAFP--LSGR-APFVLNWQEFEAYFRKMSYTGVID--- 218 (373)
T ss_pred HHHHHHHHHHHhHhHHHHHHHhCCccccCcCCcchhHHHHHHhcCC--CCCC-CCCcCCHHHHHHHHHHHHHcCCcC---
Confidence 9999999999999999999999999999999999999999999999 7776 567999999999999999887762
Q ss_pred cCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCccc---ceEeeecCCCCc-hhhhhHHHHHHHHhccC
Q 014295 309 KKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRGADGGP-WRRLCALPAFWVGLLYD 384 (427)
Q Consensus 309 ~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~---~~IEiR~~Da~P-~~~~~A~~Al~~GLl~~ 384 (427)
..+++||+|||+ +|||||++|+|+ ..++++++||+.+|+..
T Consensus 219 -----------------------------------d~~~~~WdvRp~~~~~TvEiRv~D~~~~~~~~~~iaal~~alv~~ 263 (373)
T PRK13516 219 -----------------------------------SMKDFYWDIRPKPEFGTVEVRVMDTPLTLERAAAIAAYIQALARW 263 (373)
T ss_pred -----------------------------------CCCeeEEEeccCCCCCCeEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 135679999998 799999999999 68999999999999754
Q ss_pred h
Q 014295 385 E 385 (427)
Q Consensus 385 ~ 385 (427)
.
T Consensus 264 ~ 264 (373)
T PRK13516 264 L 264 (373)
T ss_pred H
Confidence 3
No 8
>PRK13518 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=1.6e-51 Score=413.77 Aligned_cols=249 Identities=18% Similarity=0.160 Sum_probs=216.3
Q ss_pred CCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeecC-CceeEeecCccCCHHH
Q 014295 72 EKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEP-GGQFELSGAPLETLHQ 150 (427)
Q Consensus 72 ~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlEp-g~qiElst~p~~~l~~ 150 (427)
...|+|||+|+++||++ +.+++.. ...++...... .-+..|+.|. .+|||++|+||.++.+
T Consensus 11 ~~~TlGvEeE~~lvD~~-~~~~~~~-~~~vl~~~~~~----------------~~~~~~~~El~~~qvEi~T~~~~~~~e 72 (357)
T PRK13518 11 RMGTLGIEEEFFVVDEY-GRPTSGT-DELVYEHEPPE----------------ILAGRLDHELFKFVIETQTPLIEDPSE 72 (357)
T ss_pred CCCceEEEEEEEEECCC-CCcccch-hHHHHHhcccc----------------cCCCcccccccCceEEEcCcCcCCHHH
Confidence 34599999999999997 7776431 14555543220 0023577774 5999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCHHH
Q 014295 151 TCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEAD 230 (427)
Q Consensus 151 l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~ 230 (427)
+.++|...++.+.++|+++|++|++.|+||+..|.+++++||+||+.|.+.+ |..++.+. +||+||||++++.++
T Consensus 73 l~~~L~~~r~~l~~aa~~~g~~l~a~GthP~~~~~~~~~t~~~RY~~m~~~~---~~~~~~~~--~~G~HVHVg~~d~d~ 147 (357)
T PRK13518 73 AGAALREVRDALVDHAAAHGYRIAAAGLHPAAKWRELEHAEKPRYRSQLDRI---QYPQHRNT--TAGLHVHVGVDDADK 147 (357)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCccccCCCCCcHHHHHHHhc---ccchhcce--eeEEEEEeCCCCHHH
Confidence 9999999999999999999999999999999999999999999999998876 34455544 999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecC
Q 014295 231 MIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKK 310 (427)
Q Consensus 231 ~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~ 310 (427)
++..+|.++.++|+++|||||||||+|+||||+|+|+.+|++|| ++|. |++|+++++|++|++.++++++|.
T Consensus 148 av~v~n~lr~~LP~LlALsAnSPf~~G~dTG~aS~R~~iw~~~P--~aG~-p~~f~~~~~ye~~v~~l~~~G~i~----- 219 (357)
T PRK13518 148 AVWIANELRWHLPILLALSANSPYWNGFDTGLASARAKIFEGLP--NTGM-PTAFEDFEAFQRFERRMVETGSIE----- 219 (357)
T ss_pred HHHHHHHHHhHHHHHHHHHcCCccccCcCCCcccHHHHHHHhCC--CCCC-CcccCCHHHHHHHHHHHHhcCCcC-----
Confidence 99999999999999999999999999999999999999999999 4565 889999999999999999988762
Q ss_pred ccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCccc---ceEeeecCCCCc-hhhhhHHHHHHHHhccC
Q 014295 311 KYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRGADGGP-WRRLCALPAFWVGLLYD 384 (427)
Q Consensus 311 ~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~---~~IEiR~~Da~P-~~~~~A~~Al~~GLl~~ 384 (427)
-.+++||++||+ +|||+|++|+|| ..++++++||+.+|+..
T Consensus 220 ---------------------------------d~~~i~wdvRps~~~pTvEiRv~D~~~~~~~~~~lAal~raLv~~ 264 (357)
T PRK13518 220 ---------------------------------DRGELWYDVRPHTGHGTVEVRTPDAQADPDVVLAFVEYVHALVTD 264 (357)
T ss_pred ---------------------------------CCCceEEccCCCCCCCceeEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 146789999998 799999999999 79999999999999754
No 9
>PRK13515 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=4.3e-50 Score=408.88 Aligned_cols=249 Identities=21% Similarity=0.295 Sum_probs=223.2
Q ss_pred CCCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHH
Q 014295 72 EKWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQ 150 (427)
Q Consensus 72 ~~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~ 150 (427)
+.+++|||+|+++||+.|+++++.. .++|....+. .+..|+.| ..+|||++|+||.++.+
T Consensus 4 ~~~t~GvE~E~~lVD~~t~~l~~~~--~~~l~~~~~~-----------------~~~~i~~El~~~qiEi~T~p~~~~~e 64 (371)
T PRK13515 4 PEFTLGIEEEYLLVDPETRDLRSYP--DALVEACRDT-----------------LGEQVKPEMHQSQVEVGTPVCATIAE 64 (371)
T ss_pred CCCcceEeEeEEEecCCcccccccH--HHHHHhchhh-----------------cCCccCcchhccEEEECCcccCCHHH
Confidence 4679999999999999999998876 7888754221 12356677 36999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCHHH
Q 014295 151 TCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEAD 230 (427)
Q Consensus 151 l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~ 230 (427)
+.++|.+.++.+.++|+++|+.++++|+||+..+.+.+++|++||+.|.+.+ |.+++.|| +||+||||+++++++
T Consensus 65 l~~~L~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~t~~~RY~~m~~~~---~~~~~~~~--~~g~HVhv~~~d~e~ 139 (371)
T PRK13515 65 AREELGRLRQRVAQLAAQFGLRIIAAGTHPFADWRRQEITPKERYAQLVEDL---QDVARRNL--ICGLHVHVGIPDRED 139 (371)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEeccCCCCCCCccCCCCCchHHHHHHHHH---HHHHHhhc--eeeeEEEeCCCCHHH
Confidence 9999999999999999999999999999999998888999999999999877 45688888 999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecC
Q 014295 231 MIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKK 310 (427)
Q Consensus 231 ~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~ 310 (427)
+++++|+++.++|+++|||||||||+|++|||+|+|+.+|+++| |+| +|+.|.++++|++|++.+++.++|.
T Consensus 140 ~~~~~n~~~~~lP~llALsanSPf~~G~dtg~~S~R~~~~~~~p--~~g-~p~~~~~~~~y~~~~~~l~~~g~i~----- 211 (371)
T PRK13515 140 RIDLMNQVRYFLPHLLALSTSSPFWGGRDTGLKSYRSAVFDEFP--RTG-LPPAFPSWAEYQRYVALLVKTGCID----- 211 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCCCCchhhhHHHHHhhCC--CCC-CCCCCCCHHHHHHHHHHHHhcCCcC-----
Confidence 99999999999999999999999999999999999999999998 777 5778999999999999999876652
Q ss_pred ccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCccc---ceEeeecCCCCc-hhhhhHHHHHHHHhccCh
Q 014295 311 KYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRGADGGP-WRRLCALPAFWVGLLYDE 385 (427)
Q Consensus 311 ~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~---~~IEiR~~Da~P-~~~~~A~~Al~~GLl~~~ 385 (427)
-.+++|++|||+ +|||||++|+|| .+++++++||+.||+...
T Consensus 212 ---------------------------------~~~~~~~~vRp~~~~~tiEiRv~D~~p~~~~~~a~aal~~~lv~~l 257 (371)
T PRK13515 212 ---------------------------------DAKKIWWDLRPSPRFPTLELRICDVCTRLDDALALAALFQALVRKL 257 (371)
T ss_pred ---------------------------------CCCeEEEEeccCCCCCCeeEecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 146789999998 699999999999 799999999999998553
No 10
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6.3.2.2 from EC). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver [] discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana (Mouse-ear cress) gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 1R8G_A 2GWC_E 2GWD_A 1TT4_B.
Probab=100.00 E-value=3.1e-52 Score=411.24 Aligned_cols=285 Identities=33% Similarity=0.458 Sum_probs=220.2
Q ss_pred eEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeecCCceeEeecCccCCHHHHHHHH
Q 014295 76 IGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEV 155 (427)
Q Consensus 76 iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlEpg~qiElst~p~~~l~~l~~el 155 (427)
+|+|+|++|||+.|+.+. .+ ..+. ++.++++..++..++.++++|||++|+||.++.++.++|
T Consensus 1 ~GvE~E~~lvD~~~~~~~-~~--~~~~--------------~~~~~~~~~~~~~~~E~~~~qvEi~t~p~~~~~el~~~l 63 (288)
T PF04107_consen 1 VGVEEEFQLVDPETRPLA-RA--PELE--------------DEALIGLSPGGRVVTELPQSQVEISTPPCRSLAELREEL 63 (288)
T ss_dssp EEEEEEEEEECTTTCCCT--C--CCHH--------------CCCCCCESESSEEEEESSTTEEEEE--SBSSHHHHHHHH
T ss_pred CcEeEEEeeccCCCcccC-cc--HHHH--------------hhhhcccccCCceeeccCCCEEEEeCCCCCCHHHHHHHH
Confidence 699999999999877655 32 1111 112234444444455559999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCHHHHHHHH
Q 014295 156 NSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKF 235 (427)
Q Consensus 156 ~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~~v~~~ 235 (427)
.+.++.+.++++++|++|+++|+||+..+.+.+++|++||+.|.++|+..|..+++||+++||+||+|+..++.+ ++++
T Consensus 64 ~~~~~~l~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~~~~~~~~~g~~~~~~~~~g~hvhV~v~~~~e~~-v~~~ 142 (288)
T PF04107_consen 64 RALRRALADAAAELGLRLVAAGTHPFARWRDQPITPKPRYRAMAEYFGRRGVLARRMMTCGAHVHVGVDDGDEAA-VRVM 142 (288)
T ss_dssp HHHHHHHHHHHHCTTEEEE--SB-SS--GGGS---S-HHHHCHHHHHGGH-SGCCSHHBHEEEEEEEESSSHHHH-HHHH
T ss_pred HHHHHHHHHHHHHcCCEEEecCCCcCCCcccccCCCChhhhHHHHHHhhhhhhhhhhhhcccceEEeCCCccHHH-HHHH
Confidence 999999999999999999999999999998999999999999999998777789999977777777777765444 8999
Q ss_pred HHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecCccccC
Q 014295 236 RAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDC 315 (427)
Q Consensus 236 n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~~~~ 315 (427)
|.++.|+|+++|||||||||+|++|||+|+|+.+|+++| ++|++|..|+++++|++|+++++++++|+..+
T Consensus 143 n~~~~~~P~llALsANSP~~~G~~tg~~s~R~~~~~~~p--~~~~~P~~~~~~~~~~~~~~~l~~~~~i~~~~------- 213 (288)
T PF04107_consen 143 NALRPWLPVLLALSANSPFWEGRDTGYASYRSRIWERWP--RCGGVPPAFDDWADYEEYVEYLLDTGVIFDRR------- 213 (288)
T ss_dssp HHHHTTHHHHHHHH--B-EETTEE-S-SBHGGGCCTTST--TECS-GGGSSHHHCHHHHHHHHTTSTTESSGG-------
T ss_pred HHHHHHhHHHHHHHcCCccccCCcCCCcCcHHHHHHhCC--CCCCCCCCCCchhHHHHHHHHHHhCCccccch-------
Confidence 999999999999999999999999999999999999999 37999999999999999999999999997544
Q ss_pred CCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCcccceEeeecCCCCchhhhhHHHHHHHHhccChhhhhhHHHhh
Q 014295 316 AGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEDSLQNVLDMT 395 (427)
Q Consensus 316 ~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~~~IEiR~~Da~P~~~~~A~~Al~~GLl~~~~~l~~~~~~~ 395 (427)
..|...+. ....| .-||+.|.+++||++|.++++|+|++|+++.....+..+++.|.+++....++.++.+
T Consensus 214 -----~~~~~~r~---~~~~~-t~E~r~~d~~~~p~~~~~~~~~~r~~~a~~~~~~~~~~~~~~~~~~~~~~~e~~w~A~ 284 (288)
T PF04107_consen 214 -----MIWWDVRP---SPRFP-TVELRVHDSTLFPPVRLRAVLEARLLDALPAPRLDAAPAFPPGPLYRDLARENKWRAA 284 (288)
T ss_dssp -----GHHBSEEE---ETTTT-EEEEEEEETT-EESSHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGCCHHHHHHHHHH
T ss_pred -----hhHhhcCC---CCCCC-hhHHHhhcCCCcHHHHHHHHHHHHHHHhchHhhhccccccCCccchHHHHHHHHHHHh
Confidence 33433321 11233 5679999999999999999999999999998889999999999999875555555544
Q ss_pred c
Q 014295 396 A 396 (427)
Q Consensus 396 ~ 396 (427)
+
T Consensus 285 r 285 (288)
T PF04107_consen 285 R 285 (288)
T ss_dssp H
T ss_pred c
Confidence 3
No 11
>TIGR02048 gshA_cyano glutamate--cysteine ligase, cyanobacterial, putative. This family consists of proteins believed (see Copley SD, Dhillon JK, 2002) to be the glutamate--cysteine ligases of several cyanobacteria, which are known to make glutathione.
Probab=100.00 E-value=6.6e-47 Score=383.97 Aligned_cols=234 Identities=19% Similarity=0.234 Sum_probs=206.9
Q ss_pred eeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeecCCceeEeecCccCCHHHHHHH
Q 014295 75 RIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAE 154 (427)
Q Consensus 75 ~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlEpg~qiElst~p~~~l~~l~~e 154 (427)
++|||+|++++|+ |+.+++.+ .++|..+.+ ++.|. ..+|||++|+||.++.++.++
T Consensus 2 ~~GvEeE~~l~d~-t~~l~~~a--~~vl~~~~~---------------~~~El------~~~~IE~~T~~~~~~~el~~~ 57 (376)
T TIGR02048 2 TKGFEVEIYTGKP-TGEIVGLS--DRIVRDLSG---------------FVREP------DSRNVEYTTPPLNSYDRLLCG 57 (376)
T ss_pred CccEEEEEEEECC-CcCccccH--HHHHHhccC---------------Cccch------hhcEEEecCCCcCCHHHHHHH
Confidence 7999999999999 99999887 788876431 12222 368999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCC-eEEecccCCCCCC-CCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCHHHHH
Q 014295 155 VNSHLYQVKAVAEEMGI-GFLGIGFQPKWGL-KDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMI 232 (427)
Q Consensus 155 l~~~l~~l~~~a~~~g~-~L~~~G~~P~~~~-~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~~v 232 (427)
|.+.++.+.++|+++|+ +|++.|+||+..+ ...+++|++||+.|.+. .+|.+++ +||+||||+++|+|+++
T Consensus 58 L~~~r~~l~~~a~~~g~~~l~a~gthP~~~~~~~~~~t~~~rY~~~~~~-----~~~~~~~--i~G~HVHVgv~d~d~av 130 (376)
T TIGR02048 58 LLRPRRQLRHYLSQLGDYTLIPGSTLSLGGTDRFYRSDPQNPYHTYIEQ-----TYGTQVV--TASVHINIGIPDPEELM 130 (376)
T ss_pred HHHHHHHHHHHHHHcCCCeeeecccCCCCCCCccCcCCCcchHHHHHHH-----Hhhhhhe--eeEEEEEcCCCCHHHHH
Confidence 99999999999999999 7999999999998 56689999999999654 2355665 99999999999999999
Q ss_pred HHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecCcc
Q 014295 233 RKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKY 312 (427)
Q Consensus 233 ~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~ 312 (427)
+.+|.++.|+|+|+|||||||||+|+||||+|||..+|++|| + +|+.|.+|.+|++|++.++++++|.
T Consensus 131 ~v~n~lr~~LP~LlALSAsSPf~~G~dTG~aS~R~~~~~~~P---~--~pP~f~~~~~y~~~~~~li~~G~i~------- 198 (376)
T TIGR02048 131 RACRLVRMEAPLFLALSASSPFLDGQVTGYHSTRWQMFPKTP---Q--EVPLFTSHAHFIEWTEEQLTLGTMQ------- 198 (376)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCcchhhHHHHHHHhCC---C--CCCCcCCHHHHHHHHHHHHHcCCcc-------
Confidence 999999999999999999999999999999999999999999 4 5778999999999999998876551
Q ss_pred ccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCccc--------ceEeeecCCCCc-hhhhhHHHHHHHHhc
Q 014295 313 IDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK--------RYLEMRGADGGP-WRRLCALPAFWVGLL 382 (427)
Q Consensus 313 ~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~--------~~IEiR~~Da~P-~~~~~A~~Al~~GLl 382 (427)
-.+++||++||+ +|||||++|+|+ ..+.++++||+.+|+
T Consensus 199 -------------------------------d~~~~wwdvRPs~~~~~~~~~TlEiRV~D~~~~~~~~~aiaalv~aLv 246 (376)
T TIGR02048 199 -------------------------------NVRHLWSAVRPNGDRRPYDLNRLELRICDLVTDPISLLAITALLEARL 246 (376)
T ss_pred -------------------------------ccCeeEEecCCCCCCCcCCCCCEEEEeccCcCCHHHHHHHHHHHHHHH
Confidence 156789999955 689999999999 688899999999975
No 12
>COG2170 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1e-44 Score=353.39 Aligned_cols=248 Identities=21% Similarity=0.251 Sum_probs=219.0
Q ss_pred CCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHH
Q 014295 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQT 151 (427)
Q Consensus 73 ~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l 151 (427)
..|+|||+|+++||+.+...+..+ ..+++.+.+.. ++ ..|..| ..+++|+.|+.|.+++++
T Consensus 2 ~ltlGvE~E~~lvd~~g~dl~~~s--~~ii~~~~~~~---------------~~-~~~~~e~~e~~vE~~t~vc~~~~eA 63 (369)
T COG2170 2 RLTLGVELEFQLVDPQGYDLVGSS--DAIIEALKGKV---------------TA-GHLKHEITESTVELATGVCRLLAEA 63 (369)
T ss_pred CcccceEEEEEecCCCCccccccc--HHHHHhcCCCC---------------CC-cchhHHHHHHhhcccchhhhhHHHH
Confidence 569999999999999876777776 67777654421 11 123333 357999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeecCCCCHHHH
Q 014295 152 CAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADM 231 (427)
Q Consensus 152 ~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~~~~ 231 (427)
..++++.+..+.+++..+|+++.+.|+||+.+|...++.++|||+.+.+.+ |.+|++|. +||+||||++++++++
T Consensus 64 ~~~~r~~r~~l~q~a~d~gL~~~~~GtHPfadw~~~~~~~~prY~~~ie~~---~y~~~q~~--v~G~HVHVGi~~~d~~ 138 (369)
T COG2170 64 AAQLRALRDYLVQAASDHGLRICGGGTHPFADWRRQEVPDNPRYQRLIERT---GYLGRQMT--VAGQHVHVGIPSPDDA 138 (369)
T ss_pred HHHHHHHHHHHHHHhhhcCceecccCCCchhhhhhccCCCChhHHHHHHHh---hhHHhhee--eeeEEEEecCCCHHHH
Confidence 999999999999999999999999999999999999999999999999887 67789998 9999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecCc
Q 014295 232 IRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKK 311 (427)
Q Consensus 232 v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~ 311 (427)
+..+|.++.+.|+++|||||||||+|+||||+|+|..+|+++| +.++|+.|.+|+.|+.|++.++.+++|-
T Consensus 139 ~~~l~~l~~~~PhlLALSASSPf~~G~dTGyAS~R~~if~~~P---~~g~pp~f~sw~~f~~~~~~~~~tG~I~------ 209 (369)
T COG2170 139 MYLLHRLLRYVPHLLALSASSPFWQGTDTGYASARANIFSQLP---TNGLPPAFQSWAAFEAFFRDQLETGTID------ 209 (369)
T ss_pred HHHHHHHHhhhhHHHhhhcCCccccCccchhhhhhHhhhhhCC---cCCCCccccCHHHHHHHHHHHHHhcccc------
Confidence 9999999999999999999999999999999999999999999 5556889999999999999999888761
Q ss_pred cccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCCccc---ceEeeecCCCCc-hhhhhHHHHHHHHhccC
Q 014295 312 YIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLK---RYLEMRGADGGP-WRRLCALPAFWVGLLYD 384 (427)
Q Consensus 312 ~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~vR~~---~~IEiR~~Da~P-~~~~~A~~Al~~GLl~~ 384 (427)
|..-+|++|||+ ||||+|++|+++ ...+.|++|++.+|+..
T Consensus 210 --------------------------------~~~~lwwdIRPsph~gTlEvRi~D~~~~l~~~~aivaL~~Alv~~ 254 (369)
T COG2170 210 --------------------------------SMGDLWWDIRPSPHLGTLEVRICDTVLNLAELLAIVALIHALVVW 254 (369)
T ss_pred --------------------------------cccceEEecccCCCCCceEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 344569999998 799999999999 68999999999988543
No 13
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional
Probab=99.95 E-value=2.6e-27 Score=259.47 Aligned_cols=222 Identities=15% Similarity=0.148 Sum_probs=179.4
Q ss_pred CCeeEEEeccccccCCCCCCCC--hHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHH
Q 014295 73 KWRIGTEHEKFGFEFGTLHPMK--YEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLH 149 (427)
Q Consensus 73 ~~~iGvE~E~~lvd~~t~~~~~--~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~ 149 (427)
..++|||.|++.||++ |..++ . .++|.. .. ....|+-| ..+|+|+.|+||.++.
T Consensus 18 ~~~~GiE~E~lrVd~~-g~la~t~~---p~~lg~--~~-----------------~~~~ittdfsesqlE~iTp~~~~~~ 74 (752)
T PRK02471 18 QANFGLEKESLRVDSD-GKLALTPH---PKAFGS--RS-----------------FHPYIQTDFSESQLELITPVADSIE 74 (752)
T ss_pred cCCcceEeeeeEECCC-CCCCCCCC---chhhhc--ch-----------------hCCCcCchhHHHHHHhcCCCCCCHH
Confidence 5599999999999986 87663 3 345541 10 01345666 4689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCC-CCCCC-----CCchHHHH-HHHhcccccchhhhhhcccceeEee
Q 014295 150 QTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGL-KDIPV-----MPKGRYEI-MRNYMPKVGSLGLDMMFRTCTVQVN 222 (427)
Q Consensus 150 ~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~-~~~~~-----~p~~RY~~-m~~~~~~~g~~g~~~m~~t~s~qVh 222 (427)
++.++|....+.+...+ +.|..|++.|++|+.++ .++++ ++++||+. |.++|+ .+.++ +||+|||
T Consensus 75 ~~~~~L~~l~~~~~~~~-~~~e~lwp~smpp~~~~~~~i~iA~~~~~~~~~Yr~~L~~ryg-----~~~q~--i~GiHvn 146 (752)
T PRK02471 75 EVYRFLGALHDVASRSL-DEDEYLWPLSMPPILPDEEEIPIAQLDNREDVQYREYLAKKYG-----KKKQM--ISGIHYN 146 (752)
T ss_pred HHHHHHHHHHHHHHHhh-cCCCcccccCCCCCCCccccCcccccCCcchHHHHHHHHHHhC-----hhhcc--cCeEEEE
Confidence 99999999999999999 88999999999999887 56788 99999999 888773 23444 8999999
Q ss_pred cCCCCH------------HHHHHHHHH---------HhhhhHHHHHHhhCCCCCC---------CCCCCCccccHHHHcc
Q 014295 223 LDFSSE------------ADMIRKFRA---------GLALQPIATALFANSPFTE---------GKPNGYLSMRSHIWTD 272 (427)
Q Consensus 223 ld~~~~------------~~~v~~~n~---------~~~l~P~llALsANSPf~~---------G~~tg~~S~R~~iw~~ 272 (427)
+++++. ++++...|. .+. ..+|++||+|||||+ |.++|+.|+|...|..
T Consensus 147 ~s~~d~~~~~l~~~~~~~~~~~~~~n~~Y~~l~rnf~r~-~WLl~yL~gaSP~~~~sf~~~~~~~~~~~~~S~R~s~~g~ 225 (752)
T PRK02471 147 FSLGEALIQRLFEEQSEQQDYKDFKNDLYLKVARNFLRY-RWLLTYLFGASPVAEADFFKQNKEYLNQDVRSLRNSKYGY 225 (752)
T ss_pred eccCHHHHHHHHHhccccchHHHHHhHHHHHHHHhhHHH-HHHHHHHhcCCccchhhhccCCcccCCCCceeeeccccCC
Confidence 999987 556666665 443 233899999999999 9999999999999999
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHhcCceeeEeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhcccCCCCCC
Q 014295 273 TDNNRAGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEV 352 (427)
Q Consensus 273 ~~~~Rtg~~P~~f~s~~~~e~y~~~ll~~p~i~v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~hlstifp~v 352 (427)
++ + .++|..|.|+.+|.++++.+++..++.. .+.+|++|
T Consensus 226 ~~--~-~~~~~~~~s~~~Y~~~l~~~i~~g~l~~--------------------------------------~~e~y~~i 264 (752)
T PRK02471 226 VN--K-EDVYVSYNSLEDYVSSLENAVESGQLIS--------------------------------------EKEFYSPV 264 (752)
T ss_pred CC--C-CCCCCCcCCHHHHHHHHHHHHHcCCccc--------------------------------------cccceecc
Confidence 98 4 4467899999999999999987766532 23457777
Q ss_pred ccc-------------ceEeeecCCCCc
Q 014295 353 RLK-------------RYLEMRGADGGP 367 (427)
Q Consensus 353 R~~-------------~~IEiR~~Da~P 367 (427)
||| .|||+|++|.+|
T Consensus 265 Rpk~~~~~~~l~~~Gv~yiEvR~~D~~p 292 (752)
T PRK02471 265 RLRGAKQDRSLLEKGITYLEFRLFDLNP 292 (752)
T ss_pred CCCCCCchHHHHhcCCCEEEEecccCCC
Confidence 775 399999999999
No 14
>PRK02107 glutamate--cysteine ligase; Provisional
Probab=98.64 E-value=5.4e-07 Score=95.18 Aligned_cols=154 Identities=16% Similarity=0.096 Sum_probs=96.6
Q ss_pred CCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHH
Q 014295 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQT 151 (427)
Q Consensus 73 ~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l 151 (427)
..+.|||-|-+=|+.+ |..+...- .+.|+ + ...-..||-+ ..+|+|+.|+|+.++.++
T Consensus 20 ~~~~GIErE~lRV~~~-G~La~tpH-P~~lG---s----------------~lthp~ITTDfSEs~lE~ITP~~~s~~~~ 78 (523)
T PRK02107 20 GILRGIERETLRVTAD-GHLATTPH-PEALG---S----------------ALTHKWITTDYSEALLEFITPVDGDIDHL 78 (523)
T ss_pred hCCcceeeeeeeeCCC-CCccCCCC-ChhhC---C----------------cccCCCCCCcccHHHHHhcCCCCCCHHHH
Confidence 4589999999999875 54222110 12232 1 1112345555 357999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-CCCC-----C----CchHHHHHHHhcccccchhhhhhcccceeEe
Q 014295 152 CAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPV-----M----PKGRYEIMRNYMPKVGSLGLDMMFRTCTVQV 221 (427)
Q Consensus 152 ~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-~~~~-----~----p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qV 221 (427)
.+.|...-+.+...+ -+=.|.+..++|..+-+ ++++ + .|..||.- +. ..+|+.| -+++|+|+
T Consensus 79 l~~L~~lh~~v~~~L--~dE~LWP~SMP~~l~~d~~IpIA~YG~sn~g~~k~~YR~g---L~--~rYG~~m-Q~IsGIHy 150 (523)
T PRK02107 79 LTFLRDLHRFTARKL--GDERLWPLSMPCYLPAEQDIPIAQYGTSNIGRLKTLYREG---LK--NRYGALM-QTISGVHY 150 (523)
T ss_pred HHHHHHHHHHHHHhC--CCCccCCCCCCCCCCCcccceecccCccccchhHHHHHHH---HH--HHhChhh-hccceEEe
Confidence 988887777766665 35679999999987632 2333 1 11223221 11 2346655 34899999
Q ss_pred ecCCCCH--------------HHH-----HHHHHHHhhhhHHHHHHhhCCCCC
Q 014295 222 NLDFSSE--------------ADM-----IRKFRAGLALQPIATALFANSPFT 255 (427)
Q Consensus 222 hld~~~~--------------~~~-----v~~~n~~~~l~P~llALsANSPf~ 255 (427)
|+.+++. .++ ....+-.+.+..+++-||..||..
T Consensus 151 NfSl~~~~~~~l~~~~~~~~~~~f~s~~Y~~liRNf~Ry~WLl~YLfGASPa~ 203 (523)
T PRK02107 151 NFSLPEEFWQALCGEGSEASAKDFISEGYFALIRNYYRFGWVLPYLFGASPAL 203 (523)
T ss_pred ecCCCHHHHHHHHhccccccHHHHHhHHHHHHHHHHHHHhHHHHHHccCChhh
Confidence 9999731 122 223345556778888999999953
No 15
>TIGR01434 glu_cys_ligase glutamate--cysteine ligase. serve to protect against oxidative damage and participate in a biosynthetic or detoxification reactions.
Probab=98.57 E-value=7.9e-07 Score=93.83 Aligned_cols=153 Identities=14% Similarity=0.075 Sum_probs=94.1
Q ss_pred CeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHHH
Q 014295 74 WRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQTC 152 (427)
Q Consensus 74 ~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l~ 152 (427)
...|+|-|-+=|+.+ |..+...- ...|+ + ......||-+ ..+|+|+.|+|+.++.++.
T Consensus 17 ~~~GIErE~lRV~~~-G~La~tpH-P~~lG---s----------------~lthp~ITTDfSEs~lE~ITP~~~s~~~~l 75 (512)
T TIGR01434 17 IQRGIERETLRVNAD-GTLATTGH-PEALG---S----------------ALTHKWITTDFSEALLEFITPTDGDIAHML 75 (512)
T ss_pred cccCeeeeeeeeCCC-CCccCCCC-ChhhC---C----------------cccCCCCCCcccHHHHHhcCCCCCCHHHHH
Confidence 466999999999874 54222110 12222 1 1112345555 3589999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-CCCCC---------CchHHHHHHHhcccccchhhhhhcccceeEee
Q 014295 153 AEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---------PKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVN 222 (427)
Q Consensus 153 ~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-~~~~~---------p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVh 222 (427)
+.|...-+.+...+ -+=.|.+..++|..+.+ ++++- .|.-||.- +. ..+|+.| -.++|+|+|
T Consensus 76 ~~L~~lh~~~~~~l--~~E~LWP~SMP~~l~~d~~IpIA~yG~sn~g~~k~~YR~g---L~--~RYG~~m-Q~IsGIHyN 147 (512)
T TIGR01434 76 TFLRDLHRFTASKL--GDERMWPLSMPCYIADGQDIEIAQYGTSNIGRFKTLYREG---LK--NRYGALM-QTISGIHYN 147 (512)
T ss_pred HHHHHHHHHHHhcC--CCCccCCCCCCCCCCCccccceeecCccccchhHHHHHHH---HH--HHhChhh-hccceEEee
Confidence 88877666665543 35678999999987632 23332 12223221 11 1346554 348999999
Q ss_pred cCCCCH--------------HHHH-----HHHHHHhhhhHHHHHHhhCCCCC
Q 014295 223 LDFSSE--------------ADMI-----RKFRAGLALQPIATALFANSPFT 255 (427)
Q Consensus 223 ld~~~~--------------~~~v-----~~~n~~~~l~P~llALsANSPf~ 255 (427)
+.+++. .++. ...|-.+.+..+++-||..||..
T Consensus 148 fSl~~~~~~~l~~~~~~~~~~~f~~~~Y~~LiRNf~Ry~WLl~YLfGASPa~ 199 (512)
T TIGR01434 148 FSLPMAFWQAKRGAEGGESAKDKISAGYFRLIRNYYRFGWVIPYLFGASPAI 199 (512)
T ss_pred cCCCHHHHHHHHHhcccchHHHHHhHHHHHHHHHHHHHhHHHHHHccCChhh
Confidence 999731 1221 23344556778888999999953
No 16
>PF04262 Glu_cys_ligase: Glutamate-cysteine ligase ; InterPro: IPR007370 This is a group of bacterial glutamate-cysteine ligases that carry out the first step of the glutathione biosynthesis pathway according to the following equation: ATP + L-glutamate + L-cysteine = ADP + phosphate + L-glutamyl-L-cysteine (L-aminohexanoate can replace glutamate). ; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 3LN6_A 3LN7_B 1VA6_B 2D33_B 1V4G_B 2D32_A 3NZT_A.
Probab=98.56 E-value=3.6e-07 Score=92.81 Aligned_cols=155 Identities=21% Similarity=0.249 Sum_probs=90.5
Q ss_pred CCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHH
Q 014295 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQT 151 (427)
Q Consensus 73 ~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l 151 (427)
..++|+|.|-+=|+.+ |+.+...- ...| |-......||-+ ..+|+|+.|+|+.++.++
T Consensus 18 ~~~~GIErE~lRV~~~-G~Ls~tpH-P~~l-------------------Gs~lthpyItTDFSEsqlE~ITP~~~s~~~a 76 (377)
T PF04262_consen 18 GGNFGIERESLRVDPD-GRLSQTPH-PKAL-------------------GSRLTHPYITTDFSESQLELITPPFDSIEEA 76 (377)
T ss_dssp TEEEEEEEEEEEEETT-SCB--S-S--CCC---------------------TTT-SSEEESSBTTEEEEEEEEBSSHHHH
T ss_pred cCCeeEEeccceeCCC-CcccCCCC-Chhh-------------------CCcccCCCcCcchhHHHHHhhcCCccCHHHH
Confidence 5689999999999975 65322110 0111 112223456666 468999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-CCCCC---C------chHHHHHHHhcccccchhhhhhcccceeEe
Q 014295 152 CAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPVM---P------KGRYEIMRNYMPKVGSLGLDMMFRTCTVQV 221 (427)
Q Consensus 152 ~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-~~~~~---p------~~RY~~m~~~~~~~g~~g~~~m~~t~s~qV 221 (427)
.+.|...-+.+...+++ =.|.+..+.|..+.+ ++++- + +.-||. .+. ..+|..|. .++|+|+
T Consensus 77 l~~L~~Lh~~v~~~L~~--E~LWP~SMPp~L~~d~~IpiA~y~~s~~g~~k~~YR~---~L~--~rYG~~~Q-~isGIH~ 148 (377)
T PF04262_consen 77 LQFLEDLHQFVRRNLED--ELLWPLSMPPYLPDDDDIPIAQYGSSNAGRMKTVYRE---GLA--HRYGKKMQ-MISGIHY 148 (377)
T ss_dssp HHHHHHHHHHHHHHSTT--EEE--SSS-SS-STTCCS-B---SSCHHHHHHHHHHH---HHH--HHH-TGGG-G--EEEE
T ss_pred HHHHHHHHHHHHHhccc--ccccCCCCCCCCCCccCCceeecCCcccchhHHHHHH---HHH--HHhCcccc-ccceeEe
Confidence 99888888888777766 668999999987643 44442 1 123322 221 23455552 3899999
Q ss_pred ecCCCCH---------------HHHH-----HHHHHHhhhhHHHHHHhhCCCCCC
Q 014295 222 NLDFSSE---------------ADMI-----RKFRAGLALQPIATALFANSPFTE 256 (427)
Q Consensus 222 hld~~~~---------------~~~v-----~~~n~~~~l~P~llALsANSPf~~ 256 (427)
|+.++++ .++. +..+-...+..+++.||..||..+
T Consensus 149 NfS~~~~l~~~l~~~~~~~~~~~~fkn~~Y~~l~rnf~ry~WLl~YLfGASP~~~ 203 (377)
T PF04262_consen 149 NFSFPEELWKKLYEEQDSYESLQDFKNDLYFKLARNFLRYRWLLTYLFGASPAAE 203 (377)
T ss_dssp EEEE-HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHCCHHHHHC--BSEEE
T ss_pred ccCCCHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhh
Confidence 9999831 1111 223445567788999999999864
No 17
>COG2918 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=98.42 E-value=6.1e-06 Score=84.33 Aligned_cols=162 Identities=17% Similarity=0.180 Sum_probs=98.7
Q ss_pred CCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHH
Q 014295 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQT 151 (427)
Q Consensus 73 ~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l 151 (427)
....|+|-|-+=|+.+ |..+.-.. .++|+. ...-..||-+ ..+|+|+-|+|..+++++
T Consensus 21 ~~~~GlEREslRVt~d-G~la~TpH-P~~~G~-------------------~lthp~ItTDFsEslLEfITP~~~~id~~ 79 (518)
T COG2918 21 GGSRGLERESLRVTAD-GALALTPH-PAALGS-------------------ALTHPWITTDFAESLLEFITPVTKDIEDT 79 (518)
T ss_pred hcccccchhceeecCC-CcccCCCC-hHhhcc-------------------cccCCcccchhhHhhhhhcCCCCccHHHH
Confidence 4477999999999875 54221110 233321 2222445566 358999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-CCCC-----CCchHHHHHHH-hcccccchhhhhhcccceeEeecC
Q 014295 152 CAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-DIPV-----MPKGRYEIMRN-YMPKVGSLGLDMMFRTCTVQVNLD 224 (427)
Q Consensus 152 ~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-~~~~-----~p~~RY~~m~~-~~~~~g~~g~~~m~~t~s~qVhld 224 (427)
...|...-..+...+.. -.+.+..++|..+.. ++++ +..+|...+.+ .+. -.+|.-| -++.|+|-|.+
T Consensus 80 l~~L~diH~~~~~kl~~--E~lWPlSmP~~lp~EedI~iAqyg~s~~gr~K~~YRegL~--~rYGk~m-Q~ISGIHYNFS 154 (518)
T COG2918 80 LTFLRDIHRFVARKLGD--ERLWPLSMPCYLPAEEDIPIAQYGTSNTGRFKTLYREGLK--NRYGKLM-QTISGIHYNFS 154 (518)
T ss_pred HHHHHHHHHHHHhcCCC--ceecCCCCCCCCCcccCcceeecCCCCCchHHHHHHHHHH--HHhhhHH-hhhhceeeccc
Confidence 87666655555444443 378999999887743 3333 33345443332 221 1345554 34899999999
Q ss_pred CCCH---------------HHH-----HHHHHHHhhhhHHHHHHhhCCC-----CCCCCCC
Q 014295 225 FSSE---------------ADM-----IRKFRAGLALQPIATALFANSP-----FTEGKPN 260 (427)
Q Consensus 225 ~~~~---------------~~~-----v~~~n~~~~l~P~llALsANSP-----f~~G~~t 260 (427)
++.. .|+ .+..+-...+.-++.-||+.|| |+.|+.+
T Consensus 155 lp~~~w~~l~~~~~~e~s~~d~~s~~Y~~liRNf~R~~Wil~YLfGASPai~ssflk~~~~ 215 (518)
T COG2918 155 LPEAFWDALYGEQNEEKSARDFISAGYFKLIRNFYRFGWILPYLFGASPAICSSFLKGRPT 215 (518)
T ss_pred CCHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHhhHHHHHHhcCChHHHHHHhcCCCC
Confidence 8831 011 1222334456677778999999 6677766
No 18
>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type. gamma-glutamyltripeptides of the form gamma-Glu-Cys-X(aa). The N-terminal region is similar to proteobacterial glutamate-cysteine ligase. The C-terminal region is homologous to cyanophycin synthetase of cyanobacteria and, more distantly, to D-alanine-D-alanine ligases. Members of this family are found in Listeria and Enterococcus, Gram-positive lineages in which glutathione is produced (see PUBMED:8606174), and in Pasteurella multocida, a Proteobacterium. In Clostridium acetobutylicum, adjacent genes include separate proteins rather than a fusion protein.
Probab=98.32 E-value=6.4e-06 Score=90.73 Aligned_cols=156 Identities=14% Similarity=0.119 Sum_probs=88.0
Q ss_pred CeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeec-CCceeEeecCccCCHHHHH
Q 014295 74 WRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLE-PGGQFELSGAPLETLHQTC 152 (427)
Q Consensus 74 ~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlE-pg~qiElst~p~~~l~~l~ 152 (427)
.+.|+|-|.+=|+.+ |+.+...- .+.|.. + .....||-+ ..+|+|+.|+|..++ ++.
T Consensus 8 ~~~GiE~E~lRv~~~-G~la~tph-P~~lG~---~----------------~~hp~IttDfsEs~lE~iTp~~~~~-~~~ 65 (737)
T TIGR01435 8 GHFGLEKENQRVTSD-GKLATTPH-PAVFGN---R----------------EYHPYIQTDFSESQLELITPVTDSI-DVY 65 (737)
T ss_pred CCcceEeeeeeECCC-CCccCCCC-chHhCC---c----------------ccCCCCCCCccHHHHHhcCCCCCCH-HHH
Confidence 478999999999874 55322110 122321 1 111234444 357999999999987 355
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-C-CCCCC--chHHHHHHHhcccccchhhhhhcccceeEeecCCCCH
Q 014295 153 AEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-D-IPVMP--KGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSE 228 (427)
Q Consensus 153 ~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-~-~~~~p--~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~~ 228 (427)
+.|...-+.+...+. +=.|++..++|..+.+ + +++-. ++-.+...+++. ..+|+.| -..||+|+|++++++
T Consensus 66 ~~L~~l~~~~~~~l~--~E~lWP~SMP~~l~~~~~~i~iA~~~~~~~~~YR~~L~--~rYG~~~-q~isGiH~Nfs~~~~ 140 (737)
T TIGR01435 66 RWLENIHNVSLRSEP--EELLWPLSMPPILPAEEDIIEYATLDSPDDVKYREYLA--KGYGKKK-QMVSGIHYNFSFPEA 140 (737)
T ss_pred HHHHHHHHHHHhhCC--CccccCCCCCCCCCCcccccccccCCChhHhHHHHHHH--HHhCchh-hccceEEEeecCCHH
Confidence 555544443333332 3578999999986632 2 23311 111122222222 1345544 238999999999731
Q ss_pred ---------------HHH-----HHHHHHHhhhhHHHHHHhhCCCCCC
Q 014295 229 ---------------ADM-----IRKFRAGLALQPIATALFANSPFTE 256 (427)
Q Consensus 229 ---------------~~~-----v~~~n~~~~l~P~llALsANSPf~~ 256 (427)
.++ ....+-.+.+..+++-||..||..+
T Consensus 141 ~~~~l~~~~~~~~~~~~f~n~~Y~~l~rnf~ry~Wll~YLfGASP~~~ 188 (737)
T TIGR01435 141 LIDGLYAEQHENESKRDFKNRLYLKVAKNFLRYRWLLIYLTGASPVYE 188 (737)
T ss_pred HHHHHHHhccccccHHHHHhHHHHHHHHHHHHHhHHHHHHccCCchhh
Confidence 112 2223344556788889999999653
No 19
>PF03074 GCS: Glutamate-cysteine ligase; InterPro: IPR004308 This family represents the catalytic subunit of glutamate-cysteine ligase (6.3.2.2 from EC), also known as gamma-glutamylcysteine synthetase (GCS). This enzyme catalyses the rate limiting step in the biosynthesis of glutathione. The eukaryotic enzyme is a dimer of a heavy chain and a light chain with all the catalytic activity exhibited by the heavy chain.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 3LVW_A 3LVV_A 3IG8_A 3IG5_A.
Probab=98.26 E-value=1.8e-06 Score=86.90 Aligned_cols=68 Identities=24% Similarity=0.314 Sum_probs=50.3
Q ss_pred hhhhhhcccceeEeecCCCCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCC
Q 014295 208 LGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA 278 (427)
Q Consensus 208 ~g~~~m~~t~s~qVhld~~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rt 278 (427)
+|..|. .|.+||-.+..+.+++-..|..+..+.|+++||+|.||++.|..+... .|..+=.++.++||
T Consensus 6 mgFGMG--~ccLQvTfqa~~i~eaR~lyDql~~~~Pi~LalsAasp~~~G~l~d~D-~RW~vis~svDdRt 73 (371)
T PF03074_consen 6 MGFGMG--CCCLQVTFQACNIDEARYLYDQLAPLCPIMLALSAASPIFKGYLADVD-VRWNVISGSVDDRT 73 (371)
T ss_dssp GGGTTT--S-BEEEEEEESSHHHHHHHHHHHTTHHHHHHHHC----EETTEEBSBS--SHHHHHHHT----
T ss_pred cccccc--hhhhHHhHhccChHHHHHHHHhhcchhHHHHHHhhcChhhcceeeccc-cchHHHhhhhcCCC
Confidence 456665 789999999999999999999999999999999999999999876654 78887777766776
No 20
>KOG3754 consensus Gamma-glutamylcysteine synthetase [Coenzyme transport and metabolism]
Probab=98.26 E-value=8.3e-06 Score=83.07 Aligned_cols=290 Identities=16% Similarity=0.233 Sum_probs=162.9
Q ss_pred HHHHHHHHHcC-CCCCCCCeeEEEeccccccCCCCC---CCChHHHHHHHHHHhhccccchhccCccccccccCCceeee
Q 014295 57 KEDLVGYLASG-CKPKEKWRIGTEHEKFGFEFGTLH---PMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISL 132 (427)
Q Consensus 57 ~~~l~~~~~~~-~~~~~~~~iGvE~E~~lvd~~t~~---~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itl 132 (427)
+.++...+..- .+.+....-|=|+|+.+|+-++.. .++.. -+++|..+... + +....+|...-+.+|..+.-+
T Consensus 27 I~Qfl~iyh~~k~r~~D~LkWGDEiEy~vV~fDd~~kk~rv~l~-~e~iL~~L~~~-~-~~~~png~~~lwrPEyG~YMi 103 (640)
T KOG3754|consen 27 IEQFLNIYHALKSRHGDVLKWGDEIEYMVVKFDDKNKKARVSLR-AEKILNELNEE-E-SLTEPNGADVLWRPEYGRYMI 103 (640)
T ss_pred HHHHHHHHHHHhhccCCcccccceeEEEEEecccccceeeeeee-HHHHHHHhhhh-h-hccccCCCCccccccccceee
Confidence 33444444333 356778899999999999876532 22221 26788877653 1 122234445556677666666
Q ss_pred c--CCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEe-----cccC----CCCCCC-------------CCC
Q 014295 133 E--PGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLG-----IGFQ----PKWGLK-------------DIP 188 (427)
Q Consensus 133 E--pg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~-----~G~~----P~~~~~-------------~~~ 188 (427)
| ||... ++-..+..-++..++..+..+...+.+..+-+.- +|+. |..+++ +..
T Consensus 104 EgTPg~Py---gg~~~~fn~VEaNMr~RR~~~~~~L~~~e~~ltiT~FprlG~PgFt~pev~~n~~~~~asrSlf~Pdea 180 (640)
T KOG3754|consen 104 EGTPGSPY---GGLMASFNFVEANMRKRRKIAEYKLSEDEVPLTITNFPRLGCPGFTNPEVPANPKNAAASRSLFLPDEA 180 (640)
T ss_pred ccCCCCCc---cchhhheehhhHHHHHHHHHHHhhccccccceEEeccccCCCCCCCCcCCCCCccCcccccceeCcHHH
Confidence 5 43221 1111223334444555555555555544332222 2433 322221 112
Q ss_pred CCCchHHHHHHHhcccc-cc-------------------------------------------hhhhhhcccceeEeecC
Q 014295 189 VMPKGRYEIMRNYMPKV-GS-------------------------------------------LGLDMMFRTCTVQVNLD 224 (427)
Q Consensus 189 ~~p~~RY~~m~~~~~~~-g~-------------------------------------------~g~~~m~~t~s~qVhld 224 (427)
+.-++|+.-+.+-.... |. +|..|. .|-+||..+
T Consensus 181 In~HpRF~tLT~nIr~RRGeKV~invpifkD~nTp~pf~e~~~~~~~ped~~a~~pdhIymDsMGFGMG--ccCLQvTFQ 258 (640)
T KOG3754|consen 181 INGHPRFPTLTANIRTRRGEKVAINVPIFKDTNTPSPFDEIYRDWFLPEDARAKKPDHIYMDSMGFGMG--CCCLQVTFQ 258 (640)
T ss_pred hhcCCCcchhhhhhhhccCceeEEecceeccCCCCCCccchhhhccCccccccCCCCeEEEcccccCcc--ceeeEeeee
Confidence 34457776665543211 20 122222 677999999
Q ss_pred CCCHHHHHHHHHHHhhhhHHHHHHhhCCCCCCCCCCCCccccHHHHccCCCCCC----CCCCC----------CCCCchh
Q 014295 225 FSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGYLSMRSHIWTDTDNNRA----GMLPF----------VFDDSFG 290 (427)
Q Consensus 225 ~~~~~~~v~~~n~~~~l~P~llALsANSPf~~G~~tg~~S~R~~iw~~~~~~Rt----g~~P~----------~f~s~~~ 290 (427)
..+-+++-..|..+..+.|+++||||.||++.|..+.- ..|..+-..+.++|| |..|- -.+|.+.
T Consensus 259 A~ni~eAR~LYDqL~pi~PimlAlSAatP~frGylad~-DcRWnVIs~sVDdRT~eErgl~PL~~~~~~I~KSRYdSvD~ 337 (640)
T KOG3754|consen 259 ACNIDEARYLYDQLTPITPIMLALSAATPAFRGYLADQ-DCRWNVISGSVDDRTPEERGLAPLKNKKLRIPKSRYDSVDL 337 (640)
T ss_pred ccCchHHHHHHHhhccchHHHHHHhccChhhccccccc-ccccceeeccccCCChhhcCCccccccceecccccccchhe
Confidence 99888999999999999999999999999998876544 367666666767787 33331 1111110
Q ss_pred H----------------HHHHHHHhcCce----------eeEeecCccccCCCCcHHHhhhCCCCCCCCCCCChhhhhhc
Q 014295 291 F----------------EQYVDYALDVPM----------YFVYRKKKYIDCAGMSFRDFLAGKLPCLPGELPTLNDWENH 344 (427)
Q Consensus 291 ~----------------e~y~~~ll~~p~----------i~v~r~~~~~~~~~~~f~d~l~~~~~~~~g~~ptl~dl~~h 344 (427)
| +...+.+++-.+ +|+ .-+-..|++-+..+ ..-+-+++++-
T Consensus 338 yls~~~~~YNDvpl~ide~vy~~Ll~~~iD~~LAkH~AHlfi-------RDp~~~F~e~i~qd------d~~ss~HFEni 404 (640)
T KOG3754|consen 338 YLSPCKRKYNDVPLTIDEKVYGRLLEGGIDELLAKHVAHLFI-------RDPVSLFEEKIHQD------DKTSSDHFENI 404 (640)
T ss_pred eecCCCCccCCCCccccHHHHHHHHhcCccHHHHHHHHHHhh-------cChHHHHHHHHhcc------cccchhhhhhh
Confidence 0 111111111110 111 00113455544432 12246889999
Q ss_pred ccCCCCCCccc--------c-eEeeecCCCCch
Q 014295 345 LTTIFPEVRLK--------R-YLEMRGADGGPW 368 (427)
Q Consensus 345 lstifp~vR~~--------~-~IEiR~~Da~P~ 368 (427)
.||-|...|.| | ++|+|.+-.|-.
T Consensus 405 qSTNWqtmRFKPPpp~s~iGWRVEFRp~EvQlt 437 (640)
T KOG3754|consen 405 QSTNWQTMRFKPPPPNSSIGWRVEFRPMEVQLT 437 (640)
T ss_pred cccccceeccCCcCCCCCCceeEEeeeeeEEec
Confidence 99999988888 3 999999999984
No 21
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism]
Probab=97.79 E-value=0.00072 Score=70.77 Aligned_cols=109 Identities=21% Similarity=0.308 Sum_probs=69.9
Q ss_pred CcccCCCCCC-HHHHHHHHHcCC-CCCCCCeeEEEeccccccCCC-----CCCCCh---------HH----HHHHHHHHh
Q 014295 47 DAVVVTEPLT-KEDLVGYLASGC-KPKEKWRIGTEHEKFGFEFGT-----LHPMKY---------EQ----IAELLNSIA 106 (427)
Q Consensus 47 ~~~~~~~~~~-~~~l~~~~~~~~-~~~~~~~iGvE~E~~lvd~~t-----~~~~~~---------~~----i~~lL~~l~ 106 (427)
..+....|.. ++.+++++++-. .+ ..+|.|+||||+|... +.+.+. .. ..++...+.
T Consensus 100 g~p~~~dPR~vlkr~~~~l~~~G~~~---~~~g~E~EFfLfd~~~~~~~~~~~~~~~~yf~~~~~~~~~~~~~di~~~l~ 176 (443)
T COG0174 100 GTPYPRDPRSVLKRALARLKDEGLAP---AVVGPELEFFLFDRDGRDPDGGRPADKGGYFDVAPLDEAEDFRRDIVEALE 176 (443)
T ss_pred CCcCCCChHHHHHHHHHHHHhcCCcc---ceeecceeEEEeecccCCcccCccCCCCcccCccccccHHHHHHHHHHHHH
Confidence 3344445555 555566555433 33 5899999999999632 222222 11 223333332
Q ss_pred hccccchhccCccccccccCCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014295 107 ERFDWEKVMEGDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 107 ~~~g~~~~~~~~~~igl~~e~~~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
. . |+..+ .+..|-+ +|.||+.. ..++-++++++..+...++.+|+++|+...
T Consensus 177 ~-~------------Gi~ie--~~hhEva~gQ~EI~~~-~~~~l~~AD~~~~~K~vvk~vA~~hG~~aT 229 (443)
T COG0174 177 A-A------------GIEIE--AIHHEVAPGQFEINLR-FDDALKAADQIVIFKYVVKEVAEKHGLTAT 229 (443)
T ss_pred H-C------------CCCcE--eccccccCCceEEecC-CCCHHHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 2 1 22323 3456633 69999999 778999999999999999999999998764
No 22
>TIGR03105 gln_synth_III glutamine synthetase, type III. This family consists of the type III isozyme of glutamine synthetase, originally described in Rhizobium meliloti, where types I and II also occur.
Probab=97.66 E-value=0.0039 Score=65.43 Aligned_cols=45 Identities=27% Similarity=0.250 Sum_probs=37.7
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014295 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 129 ~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
.+..|-+ ||+|++..+. +.-++.+.+......++++|+++|+...
T Consensus 176 ~~~~E~gpGQ~Ei~l~~~-~~l~aaD~~~~~k~~vk~vA~~~Gl~at 221 (435)
T TIGR03105 176 QNDHEDANGQFEMNFTYA-DALTTADRHAFFRYMVKEIAEKHGMRAT 221 (435)
T ss_pred EeecCcCCCceEEecCcc-hHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 4555633 7999999997 6778899999999999999999999764
No 23
>PRK09469 glnA glutamine synthetase; Provisional
Probab=97.59 E-value=0.0055 Score=64.92 Aligned_cols=46 Identities=24% Similarity=0.224 Sum_probs=38.5
Q ss_pred ceeeecC--CceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014295 128 QSISLEP--GGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 128 ~~itlEp--g~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
..+..|- .||+||+..+. +.-++.+.+..+...++++|+++|+...
T Consensus 208 ~~~h~E~g~~GQ~Ei~l~~~-d~L~aaD~~~~~k~~vk~va~~~g~~at 255 (469)
T PRK09469 208 EAHHHEVATAGQNEVATRFN-TMTKKADEIQIYKYVVHNVAHAFGKTAT 255 (469)
T ss_pred EEeeCCCCCCCeEEEeccCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 3456673 37999999995 6889999999999999999999998654
No 24
>PLN02284 glutamine synthetase
Probab=97.47 E-value=0.0035 Score=64.04 Aligned_cols=93 Identities=20% Similarity=0.206 Sum_probs=61.4
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccc
Q 014295 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGS 207 (427)
Q Consensus 129 ~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~ 207 (427)
.+..|-+ ||.|++..+. +.-++.+.+.-+...++.+|+++|+... +.|+.-.
T Consensus 188 ~~h~E~apGQ~Ei~l~~~-d~l~aAD~~~~~K~vvk~vA~~~Gl~AT---FMPKP~~----------------------- 240 (354)
T PLN02284 188 GINGEVMPGQWEFQVGPV-VGISAGDQLWVARYILERITEIAGVVVS---FDPKPIP----------------------- 240 (354)
T ss_pred EEEcCcCCCceEEEecCC-cHHHHHHHHHHHHHHHHHHHHHhCCEEE---EcCCCCC-----------------------
Confidence 4556633 6999999986 5677889999999999999999998654 3443110
Q ss_pred hhhhhhcccceeEeecCCCC--H---HH-HHHHHHHH-hhhhHHHHHHhhCC
Q 014295 208 LGLDMMFRTCTVQVNLDFSS--E---AD-MIRKFRAG-LALQPIATALFANS 252 (427)
Q Consensus 208 ~g~~~m~~t~s~qVhld~~~--~---~~-~v~~~n~~-~~l~P~llALsANS 252 (427)
| + ....|+|+|+..-+ . .. +...+-.+ +...|.+.|+++||
T Consensus 241 -~-~--~~GSGmH~H~SL~~~~~~gg~~~~~~~l~~~~l~h~~~l~a~~~NS 288 (354)
T PLN02284 241 -G-D--WNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGN 288 (354)
T ss_pred -C-C--CccCcceeecChhhcccCCcHHHHHHHHHHHHHHHHHHhhhhhcCc
Confidence 0 0 11568888888653 1 12 22222233 66778888888765
No 25
>PLN03036 glutamine synthetase; Provisional
Probab=97.45 E-value=0.0028 Score=66.22 Aligned_cols=154 Identities=15% Similarity=0.116 Sum_probs=90.6
Q ss_pred HHHHHHHHHcCCCCCCCCeeEEEeccccccCCC----CCC-----CCh---------HH--HHHHHHHHhhccccchhcc
Q 014295 57 KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGT----LHP-----MKY---------EQ--IAELLNSIAERFDWEKVME 116 (427)
Q Consensus 57 ~~~l~~~~~~~~~~~~~~~iGvE~E~~lvd~~t----~~~-----~~~---------~~--i~~lL~~l~~~~g~~~~~~ 116 (427)
...|.+.+++-...+-...+|+|+||++++.+. +-+ .+. .. ..++++.+.+...
T Consensus 167 R~~L~~vl~~~~~~g~~p~~G~E~EF~Lf~~~~~~~~G~~~~~~p~p~g~yy~~~~~d~~~~~~i~~~i~~a~~------ 240 (432)
T PLN03036 167 RHRAAEIFSNKKVVDEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDISDAHYKACL------ 240 (432)
T ss_pred HHHHHHHHHHhcccCCeEEEEeeeEEEEEEcccccccCCCCCCccCCCCCcCCCchhhhhhHHHHHHHHHHHHH------
Confidence 447777776543333456999999999997531 111 111 00 1233333322110
Q ss_pred CccccccccCCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHH
Q 014295 117 GDYIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRY 195 (427)
Q Consensus 117 ~~~~igl~~e~~~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY 195 (427)
..|+. -..+..|-+ ||.|++..++ +.-++.+.+--++..++++|+++|+... +.|+.-.
T Consensus 241 ---~~GI~--Ie~~~~E~gpGQ~Ei~l~~~-d~L~aAD~~~l~R~ivk~VA~~~Gl~AT---FMPKP~~----------- 300 (432)
T PLN03036 241 ---YAGIN--ISGTNGEVMPGQWEYQVGPS-VGIDAGDHIWCSRYILERITEQAGVVLT---LDPKPIE----------- 300 (432)
T ss_pred ---HCCCC--eEEEEcCcCCCceEEecCCC-hHHHHHHHHHHHHHHHHHHHHHhCCEEE---EcCCcCC-----------
Confidence 01222 245666733 6999999997 4667788999999999999999998654 3554110
Q ss_pred HHHHHhcccccchhhhhhcccceeEeecCCCC--HH---HHH-HHHH-HHhhhhHHHHHHhhCC
Q 014295 196 EIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSS--EA---DMI-RKFR-AGLALQPIATALFANS 252 (427)
Q Consensus 196 ~~m~~~~~~~g~~g~~~m~~t~s~qVhld~~~--~~---~~v-~~~n-~~~~l~P~llALsANS 252 (427)
|. ...+|+|+|+..-+ .+ +.+ ..+. ..+...+.+.|+++||
T Consensus 301 -------------gd---~~GSGmHiH~Sl~d~r~~gg~~~~~~~i~gl~l~H~~~i~A~~~Ns 348 (432)
T PLN03036 301 -------------GD---WNGAGCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGN 348 (432)
T ss_pred -------------CC---cCCCCceeEechhhccccchHHHHHHHHhhHHHHHHHHHHhhhcCh
Confidence 10 11578888888764 21 111 1122 3566788888887755
No 26
>PF12224 Amidoligase_2: Putative amidoligase enzyme; InterPro: IPR022025 This family of proteins are likely to act as amidoligase enzymes [] Protein in this family are found in conserved gene neighbourhoods encoding a glutamine amidotransferase-like thiol peptidase (in proteobacteria) or an Aig2 family cyclotransferase protein (in firmicutes) [].
Probab=97.35 E-value=0.0096 Score=57.42 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=29.8
Q ss_pred cceeEeecCCCC----HHHHHHHHHHHhhhhHHHHHHhhCCC
Q 014295 216 TCTVQVNLDFSS----EADMIRKFRAGLALQPIATALFANSP 253 (427)
Q Consensus 216 t~s~qVhld~~~----~~~~v~~~n~~~~l~P~llALsANSP 253 (427)
+||+||||+... .++..+....+..+.|.|..+..-++
T Consensus 112 scg~HVHv~~~~~~~~~~~l~~l~~~~~~~E~~l~~~~~~~~ 153 (252)
T PF12224_consen 112 SCGFHVHVGPEPPSFSLETLKRLAKAFWLFEPWLRRLLPPDR 153 (252)
T ss_pred CeeEEEEECCCCCCccHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 599999998753 45788888888889999888865543
No 27
>TIGR00653 GlnA glutamine synthetase, type I. Alternate name: glutamate--ammonia ligase. This model represents the dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. E. coli, Synechocystis PCC6803, Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon Sulfolobus acidocaldarius differs from that in E. coli in that it is not regulated by adenylylation.
Probab=96.89 E-value=0.028 Score=59.46 Aligned_cols=46 Identities=28% Similarity=0.236 Sum_probs=38.1
Q ss_pred ceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 014295 128 QSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFL 174 (427)
Q Consensus 128 ~~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~ 174 (427)
..+..|-| ||.||+..+. +.-++.+.+......++++|+++|+...
T Consensus 200 ~~~~~E~gpGQ~Ei~l~~~-~~l~aAD~~~~~k~~ik~vA~~~G~~AT 246 (460)
T TIGR00653 200 EVHHHEVATGQHEIDFKFD-TLLKTADDIQTYKYVVKNVARKHGKTAT 246 (460)
T ss_pred eeeecCcCCCceeEecCCC-CHHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 34556644 7999999996 5888889999999999999999998654
No 28
>PF00120 Gln-synt_C: Glutamine synthetase, catalytic domain; InterPro: IPR008146 Glutamine synthetase (6.3.1.2 from EC) (GS) [] plays an essential role in the metabolism of nitrogen by catalyzing the condensation of glutamate and ammonia to form glutamine. There seem to be three different classes of GS [, , ]: Class I enzymes (GSI) are specific to prokaryotes, and are oligomers of 12 identical subunits. The activity of GSI-type enzyme is controlled by the adenylation of a tyrosine residue. The adenylated enzyme is inactive (see IPR001637 from INTERPRO). Class II enzymes (GSII) are found in eukaryotes and in bacteria belonging to the Rhizobiaceae, Frankiaceae, and Streptomycetaceae families (these bacteria have also a class-I GS). GSII are octamer of identical subunits. Plants have two or more isozymes of GSII, one of the isozymes is translocated into the chloroplast. Class III enzymes (GSIII) have been found in Bacteroides fragilis. in Butyrivibrio fibrisolvens. It is a hexamer of identical chains and in some protozoa. It is much larger (about 700 amino acids) than the GSI (450 to 470 amino acids) or GSII (350 to 420 amino acids) enzymes. While the three classes of GS's are clearly structurally related, the sequence similarities are not so extensive.; GO: 0004356 glutamate-ammonia ligase activity, 0006807 nitrogen compound metabolic process; PDB: 2J9I_E 3ZXV_D 1HTQ_D 1HTO_F 2BVC_F 2WGS_G 3ZXR_B 2WHI_D 3NG0_A 1LGR_C ....
Probab=96.67 E-value=0.017 Score=56.38 Aligned_cols=49 Identities=31% Similarity=0.472 Sum_probs=37.6
Q ss_pred eeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCC
Q 014295 129 SISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 181 (427)
Q Consensus 129 ~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~ 181 (427)
.+..|-+ ||.|++..|+..+ ++.+.+.-....++++|+++|+... ++|+
T Consensus 87 ~~h~E~gpgQ~Ei~~~~~~~l-~aaD~~~~~k~~ik~vA~~~Gl~at---FmpK 136 (259)
T PF00120_consen 87 QIHHEVGPGQYEINLGPCDPL-EAADNLVLFKEIIKEVARKHGLTAT---FMPK 136 (259)
T ss_dssp EEEEESSTTEEEEEEEEEECH-HHHHHHHHHHHHHHHHHHHTTEEEE----SSS
T ss_pred ccccccchHhhccccccCcHH-HHHHHHHHHHHHHHHHHHHcCCcee---eecc
Confidence 4556634 6999999987654 6778888999999999999998664 4554
No 29
>PF14395 COOH-NH2_lig: Phage phiEco32-like COOH.NH2 ligase-type 2
Probab=88.77 E-value=2.1 Score=41.52 Aligned_cols=119 Identities=12% Similarity=0.115 Sum_probs=77.7
Q ss_pred CCeeEEEeccccccCCCCCCCChHHHHHHHHHHhhccccchhccCccccccccCCceeeecCCceeEeecCccCCHHHHH
Q 014295 73 KWRIGTEHEKFGFEFGTLHPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTC 152 (427)
Q Consensus 73 ~~~iGvE~E~~lvd~~t~~~~~~~~i~~lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlEpg~qiElst~p~~~l~~l~ 152 (427)
..++|.-.||.+.+..+++.++.+ ..+.. ....|+...... .+. ..-| -.|+.-.|-++..++.
T Consensus 2 ~~~lGaDpEFmL~~~~g~~~v~AS---~f~~r-~G~vGcD~~~~~-------~~~---~~~P--laElRP~P~~~P~~L~ 65 (261)
T PF14395_consen 2 DVLLGADPEFMLRNPNGKRMVPAS---RFFPR-DGPVGCDARRLR-------GRR---GIYP--LAELRPAPSPDPAELF 65 (261)
T ss_pred cccccCChHHHeecCCCCeEeehh---Hhccc-CCccCccceeec-------Ccc---cccc--ceecCCCCCCCHHHHH
Confidence 468999999999998755577764 44432 111222111100 010 0012 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCeEEecccCCCCCCCCCCCCCchHHHHHHHhcccccchhhhhhcccceeEeec-CCCCHHHH
Q 014295 153 AEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLKDIPVMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNL-DFSSEADM 231 (427)
Q Consensus 153 ~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~~~~~~p~~RY~~m~~~~~~~g~~g~~~m~~t~s~qVhl-d~~~~~~~ 231 (427)
..+.+.++.+.+.....++..++ |..|+... .+|=|||+ +++-....
T Consensus 66 ~~i~~~l~~A~~~i~~~~l~W~A-G~mP~~gf-------------------------------p~GGHiHfsgv~l~~~l 113 (261)
T PF14395_consen 66 ENIRRALREAARRIPDRSLEWLA-GSMPFPGF-------------------------------PLGGHIHFSGVPLTSRL 113 (261)
T ss_pred HHHHHHHHHHHHhCCCCCceEec-CCCCCCCC-------------------------------CcCCeEEecCCCCcHHH
Confidence 99999999998888888887766 66676431 35567777 45544577
Q ss_pred HHHHHHHh
Q 014295 232 IRKFRAGL 239 (427)
Q Consensus 232 v~~~n~~~ 239 (427)
++++....
T Consensus 114 lr~LD~yL 121 (261)
T PF14395_consen 114 LRALDNYL 121 (261)
T ss_pred HHHHHHHH
Confidence 77776554
No 30
>PF04107 GCS2: Glutamate-cysteine ligase family 2(GCS2); InterPro: IPR006336 Also known as gamma-glutamylcysteine synthetase and gamma-ECS (6.3.2.2 from EC). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver [] discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana (Mouse-ear cress) gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 1R8G_A 2GWC_E 2GWD_A 1TT4_B.
Probab=77.89 E-value=1.9 Score=42.64 Aligned_cols=37 Identities=24% Similarity=0.200 Sum_probs=28.9
Q ss_pred CCCCCCccc---ceEeeecCCCC---c-hhhhhHHHHHHHHhcc
Q 014295 347 TIFPEVRLK---RYLEMRGADGG---P-WRRLCALPAFWVGLLY 383 (427)
Q Consensus 347 tifp~vR~~---~~IEiR~~Da~---P-~~~~~A~~Al~~GLl~ 383 (427)
.+|+++|++ +++|+|++|++ + .....+.+.++.++..
T Consensus 214 ~~~~~~r~~~~~~t~E~r~~d~~~~p~~~~~~~~~~r~~~a~~~ 257 (288)
T PF04107_consen 214 MIWWDVRPSPRFPTVELRVHDSTLFPPVRLRAVLEARLLDALPA 257 (288)
T ss_dssp GHHBSEEEETTTTEEEEEEEETT-EESSHHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCCCCCChhHHHhhcCCCcHHHHHHHHHHHHHHHhchH
Confidence 789999999 79999999999 4 3556666666666653
No 31
>KOG0683 consensus Glutamine synthetase [Amino acid transport and metabolism]
Probab=60.89 E-value=14 Score=37.76 Aligned_cols=113 Identities=21% Similarity=0.300 Sum_probs=65.8
Q ss_pred HHHHHHHHHcCCCCCCCCeeEEEeccccccCCCCCCCChH-------------HH--HHHHH-HHhhccccc-hhccCcc
Q 014295 57 KEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLHPMKYE-------------QI--AELLN-SIAERFDWE-KVMEGDY 119 (427)
Q Consensus 57 ~~~l~~~~~~~~~~~~~~~iGvE~E~~lvd~~t~~~~~~~-------------~i--~~lL~-~l~~~~g~~-~~~~~~~ 119 (427)
.....+.+....-.....-.|+|.|+.+++...+.|--+. +| .++.. .+.+.. +. -++
T Consensus 118 R~~c~~~~~~~~~~~~~PWfg~Eqeyt~l~~~~~~p~gwp~~GFp~Pqgpyyc~VGad~~~~rdiveah-y~acLy---- 192 (380)
T KOG0683|consen 118 RVACARIMPKLSTKDTEPWFGMEQEYTLLDALDGHPFGWPKGGFPGPQGPYYCGVGADRVFGRDIVEAH-YRACLY---- 192 (380)
T ss_pred hhhHHHHhccccccccCCchhhhHHHhhhccccCCcccCCccCCCCCCCCceeeccccccccchhhhhh-HHHHHh----
Confidence 5667777776653335568899999999987445433221 00 00000 000000 00 000
Q ss_pred ccccccCCceeeecCC-ceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCC
Q 014295 120 IIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPK 181 (427)
Q Consensus 120 ~igl~~e~~~itlEpg-~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~ 181 (427)
-|+. -..++.|.. +|.|++.+||..++. .++|--.+..|+++|+++|+-. .++|.
T Consensus 193 -aGl~--i~G~N~EvmPgQwEfqvGp~~GI~~-gD~lw~aR~il~rVae~~Gvia---sf~pK 248 (380)
T KOG0683|consen 193 -AGLN--ISGINVEVMPGQWEFQVGPCEGISM-GDQLWMARYILHRVAEKFGVIA---SFDPK 248 (380)
T ss_pred -hhee--eccccccccCceeEEeecchhcccc-hhhHHHHHHHHHHHHHHhCeeE---EecCC
Confidence 1111 234556622 699999999998754 5677788889999999999743 34554
No 32
>TIGR03686 pupylate_PafA proteasome accessory factor PafA. Members of this family are PafA (proteasome accessory factor A), a protein shown to regulate steady-state levels of certain proteasome targets in Mycobacterium tuberculosis. Iyer, et al (2008) suggest that PafA is the ligase for Pup, a ubiquitin analog attached to an epsilon-amino group of a Lys side-chain to direct the target to the proteasome.
Probab=39.88 E-value=56 Score=34.62 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=45.7
Q ss_pred eeEEEeccccccCC-CCCCCChHHHHH-HHHHHhhccccchhccCccccccccCCceeeecCCceeEeecCccCCHHHHH
Q 014295 75 RIGTEHEKFGFEFG-TLHPMKYEQIAE-LLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTC 152 (427)
Q Consensus 75 ~iGvE~E~~lvd~~-t~~~~~~~~i~~-lL~~l~~~~g~~~~~~~~~~igl~~e~~~itlEpg~qiElst~p~~~l~~l~ 152 (427)
-+|+|.||=+.-.. ..++++.+++.. ++..+.+.. ...| .+..+|.++=++-|+--|++|+-|.++.++.
T Consensus 3 i~GiEtEyGv~~~~~~~~~~~~~~~a~~lF~~v~~~~------rssN--~~L~NGaRlYvD~gaHPEYstpEc~~~~d~v 74 (453)
T TIGR03686 3 IFGVETEYGITCMDGSSRRLSPDEVARYLFRPVVSWG------RSSN--VFLANGSRLYLDVGSHPEYATAECDSLRQLI 74 (453)
T ss_pred cccceeeeeeeecCCCCCCCCHHHHHHHHHHHHHhhc------ccCC--eeccCCceEEecCCCCCCcCCcccCCHHHHH
Confidence 36999998765544 345666654333 333332221 1122 3356778888888888899999999988876
Q ss_pred H
Q 014295 153 A 153 (427)
Q Consensus 153 ~ 153 (427)
.
T Consensus 75 ~ 75 (453)
T TIGR03686 75 A 75 (453)
T ss_pred H
Confidence 5
No 33
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=30.99 E-value=2.4e+02 Score=29.49 Aligned_cols=54 Identities=15% Similarity=0.063 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCeEEecccCCCCCCC-----CCCCCCchHHHHHHHhcc
Q 014295 147 TLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGLK-----DIPVMPKGRYEIMRNYMP 203 (427)
Q Consensus 147 ~l~~l~~el~~~l~~l~~~a~~~g~~L~~~G~~P~~~~~-----~~~~~p~~RY~~m~~~~~ 203 (427)
+-.++.+.|..++.++-.+|++.|++|.- ||--++. +.-++..+=|+.|.+..+
T Consensus 204 ~~e~lwenl~yFL~~ViPvAEe~GV~LAi---HPDDPP~~i~GlpRIvst~ed~~rll~~V~ 262 (394)
T TIGR00695 204 DEEKLRDNLAFFLQEILPVAEEYGVQMAI---HPDDPPRPILGLPRIVSTIEDMQWLVATSD 262 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCEEEE---CCCCCCccccCCCcccCCHHHHHHHHHhcC
Confidence 46788899999999999999999999974 7755443 122355567888877664
No 34
>PF03136 Pup_ligase: Pup-ligase protein; InterPro: IPR004347 Pupylation is a novel protein modification system found in some bacteria []. This entry represents two related groups of proteins involved in this system. Pup ligases, such as PafA, conjugate the prokaryotic ubiquitin-like protein Pup to lysine residues in target proteins, marking them for degradation []. Pup deamidases, such as PafD, catalyse the deamidation of the Pup C-terminal glutamine to glutamate, thereby rendering the protein competent for conjugation []. It has been suggested that proteins in this entry are related to gamma-glutamyl-cysteine synthetases []. ; GO: 0010498 proteasomal protein catabolic process, 0019941 modification-dependent protein catabolic process
Probab=23.55 E-value=2.1e+02 Score=30.35 Aligned_cols=52 Identities=10% Similarity=-0.013 Sum_probs=38.3
Q ss_pred cccCCceeeecCCceeEeecCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEe
Q 014295 123 LKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLG 175 (427)
Q Consensus 123 l~~e~~~itlEpg~qiElst~p~~~l~~l~~el~~~l~~l~~~a~~~g~~L~~ 175 (427)
+..+|.++=++ ++-.|++|+-|.++.++...=.+--..+++++++.+..+-.
T Consensus 68 fL~NGaRlYvD-~aHPEYsTPEc~~~~d~v~~DrAGe~i~~~aa~~a~~~~~~ 119 (444)
T PF03136_consen 68 FLPNGARLYVD-HAHPEYSTPECDSPRDLVAYDRAGERIMQDAAREAEQRLGE 119 (444)
T ss_pred eccCcceEeec-CCCcCccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 45677888888 77899999999999988875555555566666666555443
Done!