Query 014296
Match_columns 427
No_of_seqs 292 out of 1279
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:45:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014296.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014296hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03552 Cellulose_synt: Cellu 100.0 6E-119 1E-123 952.8 23.9 418 1-425 211-706 (720)
2 PLN02638 cellulose synthase A 100.0 4E-115 8E-120 949.1 31.3 417 1-425 561-1059(1079)
3 PLN02189 cellulose synthase 100.0 6E-115 1E-119 945.1 32.4 416 1-425 543-1020(1040)
4 PLN02893 Cellulose synthase-li 100.0 3E-114 6E-119 923.3 36.3 422 1-426 309-732 (734)
5 PLN02400 cellulose synthase 100.0 4E-115 8E-120 949.6 29.6 417 1-425 568-1064(1085)
6 PLN02436 cellulose synthase A 100.0 9E-115 2E-119 943.1 30.2 415 1-425 577-1074(1094)
7 PLN02190 cellulose synthase-li 100.0 9E-115 2E-119 922.9 28.5 411 1-423 297-755 (756)
8 PLN02195 cellulose synthase A 100.0 2E-113 4E-118 929.1 32.9 415 1-425 464-955 (977)
9 PLN02915 cellulose synthase A 100.0 7E-112 2E-116 921.1 33.0 418 1-425 499-1024(1044)
10 PLN02248 cellulose synthase-li 100.0 5E-111 1E-115 916.0 32.1 416 1-425 630-1118(1135)
11 TIGR03030 CelA cellulose synth 100.0 3.5E-45 7.7E-50 401.1 32.1 326 3-406 240-574 (713)
12 PRK11498 bcsA cellulose syntha 100.0 5.3E-45 1.2E-49 400.7 29.8 324 3-405 351-686 (852)
13 PRK05454 glucosyltransferase M 99.9 2.7E-19 5.9E-24 195.1 29.0 181 3-233 232-420 (691)
14 cd04191 Glucan_BSP_ModH Glucan 99.8 3.5E-21 7.6E-26 187.4 10.2 142 3-186 107-253 (254)
15 COG1215 Glycosyltransferases, 99.8 1.1E-18 2.4E-23 179.9 13.6 139 2-191 148-291 (439)
16 PRK14583 hmsR N-glycosyltransf 99.8 1.5E-17 3.3E-22 173.8 20.8 138 3-192 167-308 (444)
17 PRK11204 N-glycosyltransferase 99.7 1.3E-16 2.9E-21 164.8 21.8 138 3-192 146-287 (420)
18 PRK14716 bacteriophage N4 adso 99.7 4.8E-17 1E-21 172.0 18.4 164 3-215 170-355 (504)
19 PRK11234 nfrB bacteriophage N4 99.7 3.2E-16 7E-21 172.0 16.3 161 3-215 167-360 (727)
20 PF13632 Glyco_trans_2_3: Glyc 99.7 3.1E-16 6.6E-21 144.4 12.3 127 4-184 11-143 (193)
21 TIGR03111 glyc2_xrt_Gpos1 puta 99.6 1.5E-14 3.4E-19 151.1 18.7 184 3-241 143-341 (439)
22 cd06435 CESA_NdvC_like NdvC_li 99.6 9E-15 1.9E-19 138.2 11.4 136 3-191 96-235 (236)
23 cd06437 CESA_CaSu_A2 Cellulose 99.5 2E-14 4.3E-19 136.1 9.5 130 3-184 99-232 (232)
24 cd06421 CESA_CelA_like CESA_Ce 99.5 2.6E-14 5.6E-19 134.2 9.2 133 4-188 97-234 (234)
25 PRK15489 nfrB bacteriophage N4 99.5 2.9E-13 6.3E-18 147.6 16.9 140 3-188 175-341 (703)
26 cd06427 CESA_like_2 CESA_like_ 99.5 8.4E-14 1.8E-18 133.0 10.2 137 4-191 97-237 (241)
27 PF13641 Glyco_tranf_2_3: Glyc 99.5 4.6E-14 9.9E-19 132.5 5.4 126 4-183 99-228 (228)
28 cd04190 Chitin_synth_C C-termi 99.4 2.6E-13 5.6E-18 130.6 6.8 152 3-186 85-243 (244)
29 cd04192 GT_2_like_e Subfamily 99.1 2.5E-10 5.5E-15 106.3 8.5 131 3-183 94-229 (229)
30 cd06434 GT2_HAS Hyaluronan syn 99.1 2.7E-10 5.9E-15 107.2 8.4 140 3-185 89-233 (235)
31 TIGR03472 HpnI hopanoid biosyn 99.0 6.7E-10 1.4E-14 113.8 9.0 128 3-185 138-273 (373)
32 cd02520 Glucosylceramide_synth 99.0 6.7E-10 1.4E-14 102.7 6.3 70 65-182 123-194 (196)
33 PF13506 Glyco_transf_21: Glyc 98.8 1.1E-08 2.4E-13 94.4 8.5 124 4-182 44-175 (175)
34 cd06439 CESA_like_1 CESA_like_ 98.7 5.8E-08 1.3E-12 92.5 8.2 128 4-187 122-251 (251)
35 cd02525 Succinoglycan_BP_ExoA 98.5 4.9E-07 1.1E-11 85.2 10.1 136 4-191 94-234 (249)
36 cd06436 GlcNAc-1-P_transferase 98.3 1E-06 2.2E-11 81.4 5.1 75 3-81 101-178 (191)
37 COG2943 MdoH Membrane glycosyl 98.2 0.00049 1.1E-08 72.4 24.0 163 7-222 256-428 (736)
38 TIGR03469 HonB hopene-associat 98.1 3.2E-05 6.9E-10 79.7 12.6 127 4-181 146-279 (384)
39 PF03142 Chitin_synth_2: Chiti 97.9 0.00033 7.1E-09 74.9 15.9 150 4-187 214-377 (527)
40 KOG2571 Chitin synthase/hyalur 97.6 0.00027 5.9E-09 78.6 10.5 138 4-183 453-596 (862)
41 cd06438 EpsO_like EpsO protein 97.4 0.00011 2.4E-09 66.9 3.2 73 3-80 93-169 (183)
42 cd04184 GT2_RfbC_Mx_like Myxoc 96.6 0.0028 6E-08 57.9 4.7 98 3-156 95-194 (202)
43 cd04195 GT2_AmsE_like GT2_AmsE 96.3 0.0051 1.1E-07 56.2 4.4 96 4-155 93-193 (201)
44 cd06433 GT_2_WfgS_like WfgS an 96.0 0.011 2.4E-07 53.1 5.3 97 5-156 89-187 (202)
45 cd02522 GT_2_like_a GT_2_like_ 96.0 0.031 6.7E-07 51.7 8.3 26 129-154 153-178 (221)
46 cd02526 GT2_RfbF_like RfbF is 95.9 0.011 2.4E-07 55.4 4.9 49 64-159 149-199 (237)
47 cd04186 GT_2_like_c Subfamily 95.4 0.028 6E-07 48.9 5.2 45 66-156 112-158 (166)
48 cd06420 GT2_Chondriotin_Pol_N 95.0 0.063 1.4E-06 47.9 6.6 31 129-159 143-176 (182)
49 TIGR01556 rhamnosyltran L-rham 94.4 0.089 1.9E-06 51.2 6.4 104 4-158 86-195 (281)
50 cd02510 pp-GalNAc-T pp-GalNAc- 94.4 0.15 3.2E-06 50.3 7.8 50 62-158 167-219 (299)
51 COG1216 Predicted glycosyltran 93.4 0.12 2.6E-06 51.4 5.3 111 4-165 97-221 (305)
52 cd04185 GT_2_like_b Subfamily 92.6 0.28 6E-06 44.8 6.0 22 135-157 146-167 (202)
53 cd06423 CESA_like CESA_like is 90.7 0.16 3.5E-06 43.6 2.2 74 4-81 91-169 (180)
54 KOG2547 Ceramide glucosyltrans 90.3 0.2 4.4E-06 51.2 2.8 124 5-182 184-314 (431)
55 PLN02726 dolichyl-phosphate be 89.8 0.9 1.9E-05 43.2 6.7 105 3-158 105-212 (243)
56 cd06442 DPM1_like DPM1_like re 89.0 1.1 2.3E-05 41.4 6.4 100 4-155 91-195 (224)
57 cd06913 beta3GnTL1_like Beta 1 88.8 1.1 2.4E-05 41.5 6.4 29 129-157 173-203 (219)
58 PF10111 Glyco_tranf_2_2: Glyc 88.7 1.1 2.3E-05 44.1 6.5 107 3-156 100-215 (281)
59 cd04196 GT_2_like_d Subfamily 88.5 0.84 1.8E-05 41.5 5.3 102 4-157 92-197 (214)
60 cd00761 Glyco_tranf_GTA_type G 73.9 4.8 0.0001 33.3 4.1 18 136-153 138-155 (156)
61 cd04188 DPG_synthase DPG_synth 68.7 12 0.00025 34.4 5.8 21 136-157 181-201 (211)
62 PF00535 Glycos_transf_2: Glyc 65.6 1.6 3.4E-05 37.3 -0.7 75 5-81 92-168 (169)
63 PF02709 Glyco_transf_7C: N-te 49.8 17 0.00036 29.0 2.8 19 137-155 47-65 (78)
64 cd04179 DPM_DPG-synthase_like 46.9 14 0.0003 32.6 2.2 74 4-81 92-166 (185)
65 PF15050 SCIMP: SCIMP protein 46.0 25 0.00055 30.6 3.4 51 276-327 2-59 (133)
66 PF06638 Strabismus: Strabismu 43.4 45 0.00097 35.8 5.5 33 394-426 150-182 (505)
67 KOG3814 Signaling protein van 42.9 56 0.0012 34.0 5.9 39 382-421 199-239 (531)
68 PRK10063 putative glycosyl tra 42.7 53 0.0011 31.6 5.7 32 129-161 161-193 (248)
69 PRK10073 putative glycosyl tra 42.3 21 0.00045 36.0 2.9 29 129-157 182-210 (328)
70 COG0798 ACR3 Arsenite efflux p 36.4 2.3E+02 0.005 29.1 9.1 72 345-421 118-189 (342)
71 COG4858 Uncharacterized membra 29.0 5.1E+02 0.011 24.6 10.3 59 345-407 101-161 (226)
72 PHA00099 minor capsid protein 23.3 34 0.00074 30.1 0.6 38 2-42 88-134 (147)
73 PRK04987 fumarate reductase su 20.2 6.1E+02 0.013 22.4 7.8 18 345-362 68-85 (130)
74 cd00546 QFR_TypeD_subunitC Qui 20.1 6E+02 0.013 22.3 8.3 18 345-362 64-81 (124)
No 1
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=5.7e-119 Score=952.83 Aligned_cols=418 Identities=42% Similarity=0.766 Sum_probs=382.8
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+.+|+|||||+||+.|+++|||||||+|+|+++||+|+|++++||+++++|+||+|||+|+||||+|||+||||
T Consensus 211 ~y~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g 290 (720)
T PF03552_consen 211 MYINNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYG 290 (720)
T ss_pred ccccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHH-----------------------HHh----hc-----------c------------------------c--
Q 014296 81 RKYDKETKI-----------------------ELK----RE-----------N------------------------D-- 96 (427)
Q Consensus 81 ~~~~~~~~~-----------------------~~~----~~-----------~------------------------g-- 96 (427)
..+.+..++ .-. +. + |
T Consensus 291 ~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S 370 (720)
T PF03552_consen 291 FDPPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQS 370 (720)
T ss_pred CCCCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCC
Confidence 765421000 000 00 0 0
Q ss_pred -hh------------hhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCccccc
Q 014296 97 -SK------------REESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFL 163 (427)
Q Consensus 97 -~~------------~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~~af~ 163 (427)
.+ ...+..+++|||++|+||+||++|+||+||||.|||+|||+.||++|||+||||+||+|+++||+
T Consensus 371 ~~fi~S~~~~~~~~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~ 450 (720)
T PF03552_consen 371 PEFIASTLMAQGGVPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFL 450 (720)
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhc
Confidence 00 01134567799999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccc-cCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCCCccc
Q 014296 164 GVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFP 242 (427)
Q Consensus 164 G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~~~~p 242 (427)
|+||+|+.+.|.|++|||+|++||+++|+||+++| .+||+++||++|++.++||++++|+++|+++|++||++|++++|
T Consensus 451 G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~P 530 (720)
T PF03552_consen 451 GSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFP 530 (720)
T ss_pred ccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccC
Confidence 99999999999999999999999999999999987 57999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCCccch
Q 014296 243 MISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDV 322 (427)
Q Consensus 243 ~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~~~~~ 322 (427)
+++++|+++|+.+++++++++++|++|+|+++++||||||||+|.++++|++|++++++|.+|+++++|+||+|+.++++
T Consensus 531 k~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~ 610 (720)
T PF03552_consen 531 KVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDED 610 (720)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987554
Q ss_pred hhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 014296 323 SQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNG 402 (427)
Q Consensus 323 ~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~ 402 (427)
.+.+ |.++|+ ||++++|++|++++|++|+++|+.+++++ ++ +.|+++++|+++|+|+|+++|||+|||++|||
T Consensus 611 ~~~~--ely~f~-wS~LfiP~tTllilNLva~v~Gi~r~i~~-g~-~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~-- 683 (720)
T PF03552_consen 611 DKYA--ELYIFK-WSPLFIPPTTLLILNLVAFVVGISRAINS-GY-GSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD-- 683 (720)
T ss_pred cccc--cccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhcc-CC-CchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--
Confidence 4433 467885 78999999999999999999999999976 33 56899999999999999999999999999986
Q ss_pred CCChhHHHHHHHHHHHHHHHhhh
Q 014296 403 KMPSSVTTKSLVLALSVCTCFTF 425 (427)
Q Consensus 403 ~~P~~~~~~s~~l~~~~~~~~~~ 425 (427)
|+|+||++||++||++||++|+-
T Consensus 684 r~P~~v~v~S~lla~i~~llwv~ 706 (720)
T PF03552_consen 684 RIPTSVIVWSVLLASIFSLLWVR 706 (720)
T ss_pred CcceeehHHHHHHHHHHHHHhee
Confidence 69999999999999999999864
No 2
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=3.7e-115 Score=949.14 Aligned_cols=417 Identities=30% Similarity=0.599 Sum_probs=382.6
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+++|+|||||+||+.++++|||||||+|+|+++||+|+|++++||+++++|+||+|||+||||||+|||+||||
T Consensus 561 mYiNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG 640 (1079)
T PLN02638 561 HYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYG 640 (1079)
T ss_pred cccCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCch----------------------h-HHHHhh-------------------------------------------c
Q 014296 81 RKYDKE----------------------T-KIELKR-------------------------------------------E 94 (427)
Q Consensus 81 ~~~~~~----------------------~-~~~~~~-------------------------------------------~ 94 (427)
..|.+. . ++.+.+ .
T Consensus 641 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (1079)
T PLN02638 641 YEPPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKR 720 (1079)
T ss_pred cCCcccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhh
Confidence 743210 0 000000 0
Q ss_pred cc---hh------------hhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCc
Q 014296 95 ND---SK------------REESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPER 159 (427)
Q Consensus 95 ~g---~~------------~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~ 159 (427)
-| .+ ...+.+++++||++|+||+||++|+||+||||.|||+|||+.||++||++||||+||+|++
T Consensus 721 fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r 800 (1079)
T PLN02638 721 FGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKR 800 (1079)
T ss_pred ccccHHHHHHHHHhhcCCCCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCc
Confidence 00 00 0113467889999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccc-cCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCC
Q 014296 160 DAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGI 238 (427)
Q Consensus 160 ~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~ 238 (427)
+||+|+||+|+.++++||+|||+|++||+++|+||+++| .++|+++||++|+++++||+.++++++|+++|++||++|+
T Consensus 801 ~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~ 880 (1079)
T PLN02638 801 PAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGK 880 (1079)
T ss_pred hHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999987 3789999999999999999999999999999999999999
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCC
Q 014296 239 PLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVA 318 (427)
Q Consensus 239 ~~~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~ 318 (427)
+++|+++.+|+++|+++|+++++++++|++|+|.++++|||+||||+|+++|+|++|++++++|.||+++++|+||+|..
T Consensus 881 ~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~ 960 (1079)
T PLN02638 881 FIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 960 (1079)
T ss_pred ccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccchhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014296 319 DEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLR 398 (427)
Q Consensus 319 ~~~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r 398 (427)
+++.. ++|+|+|+ ||++|+|++|++++|++|+++|+.+++.+ +| +.|+++++|+++|+|+|+++|||+|||++|
T Consensus 961 d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~-g~-~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR 1034 (1079)
T PLN02638 961 DEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINS-GY-QSWGPLFGKLFFAFWVIVHLYPFLKGLMGR 1034 (1079)
T ss_pred ccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhc-Cc-cccchhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 65532 36788997 99999999999999999999999999986 55 468899999999999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014296 399 KDNGKMPSSVTTKSLVLALSVCTCFTF 425 (427)
Q Consensus 399 ~~k~~~P~~~~~~s~~l~~~~~~~~~~ 425 (427)
+ +|+|++|++||++++++++++|+-
T Consensus 1035 ~--~r~P~~v~v~s~ll~~~~~l~~v~ 1059 (1079)
T PLN02638 1035 Q--NRTPTIVVVWSILLASIFSLLWVR 1059 (1079)
T ss_pred C--CCCCeeehHHHHHHHHHHHHHHhe
Confidence 8 689999999999999999999874
No 3
>PLN02189 cellulose synthase
Probab=100.00 E-value=5.9e-115 Score=945.10 Aligned_cols=416 Identities=31% Similarity=0.617 Sum_probs=382.1
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+++|+|||||+||++|+++|||||||+|+|+++||+|+|++++||+++++|+||+|||+||||||+|||+||||
T Consensus 543 mY~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG 622 (1040)
T PLN02189 543 HYINNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYG 622 (1040)
T ss_pred cccCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCch----------------------hHHHHh-----------------------hccc---h------------hhh
Q 014296 81 RKYDKE----------------------TKIELK-----------------------REND---S------------KRE 100 (427)
Q Consensus 81 ~~~~~~----------------------~~~~~~-----------------------~~~g---~------------~~~ 100 (427)
..+.+. .+.+++ +.-| . ...
T Consensus 623 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~ 702 (1040)
T PLN02189 623 YDPPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPS 702 (1040)
T ss_pred cCcccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCC
Confidence 754211 000000 0000 0 011
Q ss_pred hhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCccccccCCCcCHHHHHHHHHHH
Q 014296 101 ESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRW 180 (427)
Q Consensus 101 ~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~~af~G~aP~~l~~~l~Qr~RW 180 (427)
....++++||++|+||+||++|+||+||||.|||+|||+.||++||++||||+||+|+++||+|+||+|+.++++||+||
T Consensus 703 ~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RW 782 (1040)
T PLN02189 703 SSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRW 782 (1040)
T ss_pred CCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHH
Confidence 13467889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhcCcccccc--CcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCCCcccccchhhHHHHHHHHHH
Q 014296 181 SEGDFQIMLCRYSPARYAH--GKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFA 258 (427)
Q Consensus 181 a~G~~qi~~~~~~Pl~~~~--~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~~~~p~~~~~~~l~~~~~~~~ 258 (427)
|+|++||+++|+||+++|. ++|+++||++|+++++||+.++|+++|+++|++||++|++++|+++.+++++|+.++++
T Consensus 783 A~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~ 862 (1040)
T PLN02189 783 ALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMS 862 (1040)
T ss_pred hhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHH
Confidence 9999999999999999763 57999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhheeeccccc
Q 014296 259 KYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASS 338 (427)
Q Consensus 259 ~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~s~ 338 (427)
+++++++|++|+|+++++|||+||||+|.++++|++|++++++|+||+++++|+||+|..+++. .+|+|+|+ ||+
T Consensus 863 ~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~----~~~ly~f~-~s~ 937 (1040)
T PLN02189 863 IFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDE----FGELYAFK-WTT 937 (1040)
T ss_pred HHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccccccc----cccceeec-cee
Confidence 9999999999999999999999999999999999999999999999999999999999876553 24778997 899
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHHH
Q 014296 339 MFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALS 418 (427)
Q Consensus 339 l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~~~P~~~~~~s~~l~~~ 418 (427)
+|+|++|++++|++|+++|+++++.+ +| +.|+++++|+++|+|+|+++|||+|||++|+ +|+|++|++||++++++
T Consensus 938 l~iP~ttl~i~Nlvaiv~g~~~~~~~-~~-~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~ 1013 (1040)
T PLN02189 938 LLIPPTTLLIINIVGVVAGISDAINN-GY-QSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASI 1013 (1040)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhc-Cc-cccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHH
Confidence 99999999999999999999999986 55 4688999999999999999999999999998 68999999999999999
Q ss_pred HHHHhhh
Q 014296 419 VCTCFTF 425 (427)
Q Consensus 419 ~~~~~~~ 425 (427)
++++|+-
T Consensus 1014 ~~l~~v~ 1020 (1040)
T PLN02189 1014 FSLLWVR 1020 (1040)
T ss_pred HHHHHhe
Confidence 9999874
No 4
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.7e-114 Score=923.29 Aligned_cols=422 Identities=38% Similarity=0.779 Sum_probs=393.0
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+||||+++||||||+||+.++++|||||||+|+|+++||+|+|++++||+++++|+||+|||+||||||+|||+||+|
T Consensus 309 ~y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G 388 (734)
T PLN02893 309 MYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYG 388 (734)
T ss_pred cCCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--chhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCC
Q 014296 81 RKYD--KETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 81 ~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
.++. ++..++++.......+...++++|+|++|+||+||++|+||+|+||.|+|+|||++||++||++||||+||+|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~ 468 (734)
T PLN02893 389 GPSSLILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPK 468 (734)
T ss_pred CCccccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCC
Confidence 7542 11111111111111233467899999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCC
Q 014296 159 RDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGI 238 (427)
Q Consensus 159 ~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~ 238 (427)
++||.|++|+|+.++++||+|||+|++||+++|+||+++|.++|+++||++|++.++||+.++|+++|+++|++||++|+
T Consensus 469 ~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~~~slp~liY~~~P~l~Ll~g~ 548 (734)
T PLN02893 469 RPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWPIWSIPITIYAFLPQLALLNGV 548 (734)
T ss_pred chhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999877899999999999999999999999999999999999999
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCC
Q 014296 239 PLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVA 318 (427)
Q Consensus 239 ~~~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~ 318 (427)
+++|+.+.+|+++++++++++++++++|++++|.++++||||||+|+|+++++|+++++++++|.||+++.+|+||+|+.
T Consensus 549 ~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~~~F~VT~K~~ 628 (734)
T PLN02893 549 SIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVV 628 (734)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccCCceeecCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014296 319 DEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLR 398 (427)
Q Consensus 319 ~~~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r 398 (427)
++++.++|++|+|+|+.+||+++|+++++++|++|+++|+++++.+ +.++.+++|+++|+|+|+++|||++||++|
T Consensus 629 ~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~----~~~~~~~~~~~~~~~~v~~~~P~~~gl~~r 704 (734)
T PLN02893 629 DEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQ----RNLEGLFLQMFLAGFAVVNCWPIYEAMVLR 704 (734)
T ss_pred ccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhC----CchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8888899999999998779999999999999999999999999875 246788999999999999999999999999
Q ss_pred cCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 014296 399 KDNGKMPSSVTTKSLVLALSVCTCFTFL 426 (427)
Q Consensus 399 ~~k~~~P~~~~~~s~~l~~~~~~~~~~~ 426 (427)
|||||||+||++||++||+++|++.++.
T Consensus 705 ~dkg~~P~~v~~~s~~l~~~~~~~~~~~ 732 (734)
T PLN02893 705 TDDGKLPVKITLISIVLAWALYLASSFA 732 (734)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999988763
No 5
>PLN02400 cellulose synthase
Probab=100.00 E-value=3.6e-115 Score=949.56 Aligned_cols=417 Identities=31% Similarity=0.597 Sum_probs=382.8
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+++|+||||||||+.++++|||||||+|+|+||||+|+|++++||+++++|+||+|||+|+||||+|||+||||
T Consensus 568 mY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG 647 (1085)
T PLN02400 568 HYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYG 647 (1085)
T ss_pred cccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc--hh-H----------------------HHHhhc---------------------------------------cc
Q 014296 81 RKYDK--ET-K----------------------IELKRE---------------------------------------ND 96 (427)
Q Consensus 81 ~~~~~--~~-~----------------------~~~~~~---------------------------------------~g 96 (427)
..+.. +. + .++++. -|
T Consensus 648 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG 727 (1085)
T PLN02400 648 YDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFG 727 (1085)
T ss_pred CCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhcc
Confidence 74420 00 0 000000 00
Q ss_pred ---h------------hhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCccc
Q 014296 97 ---S------------KREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDA 161 (427)
Q Consensus 97 ---~------------~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~~a 161 (427)
. ....+.++++|||++||||+||++|+||+||||.|||+|||+.||++||++||||+||+|++++
T Consensus 728 ~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~a 807 (1085)
T PLN02400 728 QSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPA 807 (1085)
T ss_pred ccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHh
Confidence 0 0011346789999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccc-cCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCCCc
Q 014296 162 FLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPL 240 (427)
Q Consensus 162 f~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~-~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~~~ 240 (427)
|.|+||+|+.++++||+|||+|++||+++++||+++| .++|+++||++|+++++||+.++|+++|+++|++||++|+++
T Consensus 808 f~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i 887 (1085)
T PLN02400 808 FKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFI 887 (1085)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999999987 478999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCCcc
Q 014296 241 FPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADE 320 (427)
Q Consensus 241 ~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~~~ 320 (427)
+|+++.+++++|+.+++++++++++|++|+|.++++|||+||||+|+++|+|++|++++++|+||+++++|+||+|..++
T Consensus 888 ~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~ 967 (1085)
T PLN02400 888 IPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDE 967 (1085)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred chhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 014296 321 DVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKD 400 (427)
Q Consensus 321 ~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~ 400 (427)
+.. .+|+|+|+ ||++++|++|++++|++|+++|+++++.+ +| +.|+++++|+++|+|+|+++|||+|||++|+
T Consensus 968 ~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~-g~-~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~- 1040 (1085)
T PLN02400 968 DGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINS-GY-QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ- 1040 (1085)
T ss_pred ccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhc-cc-chhhHHHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 432 36788997 99999999999999999999999999986 55 5689999999999999999999999999887
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhhh
Q 014296 401 NGKMPSSVTTKSLVLALSVCTCFTF 425 (427)
Q Consensus 401 k~~~P~~~~~~s~~l~~~~~~~~~~ 425 (427)
+|+|++|++||++||++++++|+-
T Consensus 1041 -~r~P~~v~~~s~lla~~~~l~~v~ 1064 (1085)
T PLN02400 1041 -NRTPTIVIVWSILLASIFSLLWVR 1064 (1085)
T ss_pred -CCCceeHHHHHHHHHHHHHHHhee
Confidence 799999999999999999999874
No 6
>PLN02436 cellulose synthase A
Probab=100.00 E-value=8.9e-115 Score=943.12 Aligned_cols=415 Identities=32% Similarity=0.627 Sum_probs=380.0
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+++|+|||||+||+.|+++|||||||+|+|+|+||+|+|++++||+++++|+||+|||+|+||||+|||+||||
T Consensus 577 mYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG 656 (1094)
T PLN02436 577 HYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 656 (1094)
T ss_pred cccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHH------H-------------------------------------h-----------------------hc
Q 014296 81 RKYDKETKIE------L-------------------------------------K-----------------------RE 94 (427)
Q Consensus 81 ~~~~~~~~~~------~-------------------------------------~-----------------------~~ 94 (427)
..|.++.+.+ | . +.
T Consensus 657 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 736 (1094)
T PLN02436 657 YDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKK 736 (1094)
T ss_pred cCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhh
Confidence 7543111100 0 0 00
Q ss_pred cc--------------h-hhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCc
Q 014296 95 ND--------------S-KREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPER 159 (427)
Q Consensus 95 ~g--------------~-~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~ 159 (427)
-| + ....+.++++|||++|+||+||++|+||+||||.|||+|||+.||++||++||||+||+|++
T Consensus 737 FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r 816 (1094)
T PLN02436 737 FGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR 816 (1094)
T ss_pred hcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence 00 0 00113467899999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCcccccc-CcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCC
Q 014296 160 DAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAH-GKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGI 238 (427)
Q Consensus 160 ~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~-~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~ 238 (427)
+||+|+||+|+.++++||+|||+|++||+++|+||+++|. ++|+++||++|++.++||+.++|+++|+++|++||++|+
T Consensus 817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~ 896 (1094)
T PLN02436 817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGK 896 (1094)
T ss_pred hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999763 589999999999999999999999999999999999999
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCC
Q 014296 239 PLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVA 318 (427)
Q Consensus 239 ~~~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~ 318 (427)
+++|+++.+|+++|+++++++++++++|++|+|.++++|||+||||+|+++++|++|++++++|.||+++++|+||+|..
T Consensus 897 ~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~ 976 (1094)
T PLN02436 897 FIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAA 976 (1094)
T ss_pred eecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccc-hhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 014296 319 DED-VSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFL 397 (427)
Q Consensus 319 ~~~-~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~ 397 (427)
+++ .+++| +|+ ||++++|+++++++|++|+++|+.+++.+ +| +.|+++++|+++|+|+|+++|||+|||++
T Consensus 977 d~~~~a~ly-----~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~-g~-~~~g~l~~~l~~~~wvvv~lyPf~kgL~g 1048 (1094)
T PLN02436 977 DDGEFSELY-----LFK-WTSLLIPPTTLLIINIIGVIVGVSDAINN-GY-DSWGPLFGRLFFALWVIVHLYPFLKGLLG 1048 (1094)
T ss_pred cccccccee-----eec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhc-cc-cchhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 654 33555 896 89999999999999999999999999986 55 56899999999999999999999999995
Q ss_pred ccCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014296 398 RKDNGKMPSSVTTKSLVLALSVCTCFTF 425 (427)
Q Consensus 398 r~~k~~~P~~~~~~s~~l~~~~~~~~~~ 425 (427)
| ++|+|++|++||++||++++++|+-
T Consensus 1049 r--~~r~P~~v~v~s~lla~~~~l~~v~ 1074 (1094)
T PLN02436 1049 K--QDRMPTIILVWSILLASILTLLWVR 1074 (1094)
T ss_pred c--CCCCCeeehHHHHHHHHHHHHHHee
Confidence 5 4599999999999999999999874
No 7
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=8.9e-115 Score=922.91 Aligned_cols=411 Identities=32% Similarity=0.531 Sum_probs=370.3
Q ss_pred CccCChhHHHHHhhhhcCCCCC-CeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhc
Q 014296 1 MYSNNSQAVRDALCFFMDEEKG-HEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILC 79 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~-~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~ 79 (427)
||+|||+++|+|||||+||+++ +++|||||||+|+ |+|+|++++||+++++|+||+|||+|+||||+|||+|||
T Consensus 297 mY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~aly 371 (756)
T PLN02190 297 MYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMY 371 (756)
T ss_pred cccCchhHHHHhhhhhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeec
Confidence 8999999999999999998744 5899999999998 889999999999999999999999999999999999999
Q ss_pred CCCCCch---h----------H--HHHhhccch---h-------------hhhhHHHHHHhhcccccccccccccccccc
Q 014296 80 GRKYDKE---T----------K--IELKRENDS---K-------------REESLLELEETSKALASCTYETNTQWGKEI 128 (427)
Q Consensus 80 ~~~~~~~---~----------~--~~~~~~~g~---~-------------~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~ 128 (427)
|..|.+- . . .+..+..|. + ...+.++++|||++||||+||++|+||+||
T Consensus 372 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~ev 451 (756)
T PLN02190 372 GLSSDDLEDDGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTI 451 (756)
T ss_pred CCCcccccccccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhcc
Confidence 9754210 0 0 011111111 0 012346799999999999999999999999
Q ss_pred cccCCCCCchHHHHHHHHhCCcEEEEecCCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccc-cCcCChhhh
Q 014296 129 GLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLR 207 (427)
Q Consensus 129 G~~y~svtED~~tg~~lh~~GWrs~y~~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~-~~~l~~~qr 207 (427)
||.|+|+|||+.||++|||+||||+||+|+++||+|++|+|+.++++||+|||+|++||+++|+||++++ .++|+++||
T Consensus 452 G~~ygSitED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QR 531 (756)
T PLN02190 452 GWLYDSVAEDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQR 531 (756)
T ss_pred CcccceeechHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999975 579999999
Q ss_pred HhhhcccchhHHHHHHHHHHHHHHHHHHhCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHH
Q 014296 208 LGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYL 287 (427)
Q Consensus 208 l~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~~~~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~ 287 (427)
++|++..+ |+.++|+++|+++|++||++|++++|+. +|+++++++++++++++++|++|+|+|+++||||||||+|+
T Consensus 532 LaYl~~~~-~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~ 608 (756)
T PLN02190 532 LAYLYVFT-CLRSIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIK 608 (756)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEee
Confidence 99999988 9999999999999999999999999975 68888888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCeeeCcCCCc-------------cchhhhhhhhheeecccccchHHHHHHHHHHHHHH
Q 014296 288 RTTSFLFAFIDAILKTLGFSESSFVVTEKVAD-------------EDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCM 354 (427)
Q Consensus 288 ~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~~-------------~~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~ 354 (427)
++|+|++|++++++|.||+++++|+||+|..+ +++.++|++|+|+|+ +||+|+|++|++++|++|+
T Consensus 609 ~~sa~l~a~~~~~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~ 687 (756)
T PLN02190 609 ATSSWLFSIQDIILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAAL 687 (756)
T ss_pred cchHHHHHHHHHHHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999754 445689999999997 9999999999999999999
Q ss_pred HHHHHHHHHcCcc--chhhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHh
Q 014296 355 IGAVKKVIVGDGY--VKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCF 423 (427)
Q Consensus 355 ~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~~~P~~~~~~s~~l~~~~~~~~ 423 (427)
++|+++++.. .+ ++.++. ++|+++|+|+|+++|||+|||+ ||||||||.||+++|++|+++||++.
T Consensus 688 ~~g~~~~~~~-~~s~~~~~~~-l~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 688 AGFLVGLQRS-SYSHGGGGSG-LAEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred HHHHHHHhhh-hhccCccccc-HHHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 9999988642 11 133443 5999999999999999999999 99999999999999999999999875
No 8
>PLN02195 cellulose synthase A
Probab=100.00 E-value=1.9e-113 Score=929.12 Aligned_cols=415 Identities=31% Similarity=0.589 Sum_probs=380.2
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+++|||||||+||+.|+++|||||||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||||
T Consensus 464 my~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG 543 (977)
T PLN02195 464 HYVNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYG 543 (977)
T ss_pred cccCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCch------------------hHHHH---------hh--------------------------------ccc---hh
Q 014296 81 RKYDKE------------------TKIEL---------KR--------------------------------END---SK 98 (427)
Q Consensus 81 ~~~~~~------------------~~~~~---------~~--------------------------------~~g---~~ 98 (427)
..+..- .+.++ ++ .-| .+
T Consensus 544 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~f 623 (977)
T PLN02195 544 YGPPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVF 623 (977)
T ss_pred cCccccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHH
Confidence 753210 00000 00 000 00
Q ss_pred ------------hhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCccccccCC
Q 014296 99 ------------REESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVS 166 (427)
Q Consensus 99 ------------~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~~af~G~a 166 (427)
......++++||++|+||+||++|+||+||||.|||+|||+.||++||++||||+||+|+++||.|+|
T Consensus 624 i~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~A 703 (977)
T PLN02195 624 IESTLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSA 703 (977)
T ss_pred HHHHHHHhcCCCCCCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccC
Confidence 01123567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHhhhhHHHHHhhcCcccccc--CcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCCCccccc
Q 014296 167 PTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAH--GKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMI 244 (427)
Q Consensus 167 P~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~--~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~~~~p~~ 244 (427)
|+|+.++++||+|||+|++||+++|+||+++|. ++|+++||++|++.++||+.++|+++|+++|++||++|++++|++
T Consensus 704 P~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~v 783 (977)
T PLN02195 704 PINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTL 783 (977)
T ss_pred CCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccc
Confidence 999999999999999999999999999999763 689999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCCccc-hh
Q 014296 245 SSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADED-VS 323 (427)
Q Consensus 245 ~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~~~~-~~ 323 (427)
+.+++++++.+++++++++++|++|+|.++++||||||||+|+++|+|++|++++++|+||+++++|+||+|..+++ .+
T Consensus 784 s~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~~~ 863 (977)
T PLN02195 784 SNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTEFG 863 (977)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccchh
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999987753 44
Q ss_pred hhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 014296 324 QRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGK 403 (427)
Q Consensus 324 ~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~~ 403 (427)
++| +|+ ||++|+|++|++++|++|+++|+.+++.+ +| +.++++++|+++|+|+|+++|||+|||++|+ +|
T Consensus 864 ~~Y-----~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~-~~-~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r 933 (977)
T PLN02195 864 ELY-----MVK-WTTLLIPPTSLLIINLVGVVAGFSDALNK-GY-EAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NR 933 (977)
T ss_pred cce-----ecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhc-Cc-chhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CC
Confidence 555 896 99999999999999999999999999986 55 5689999999999999999999999999998 68
Q ss_pred CChhHHHHHHHHHHHHHHHhhh
Q 014296 404 MPSSVTTKSLVLALSVCTCFTF 425 (427)
Q Consensus 404 ~P~~~~~~s~~l~~~~~~~~~~ 425 (427)
+|++|++||++++++++++|+-
T Consensus 934 ~P~~v~v~s~ll~~~~~l~~v~ 955 (977)
T PLN02195 934 TPTIVVLWSVLLASVFSLVWVK 955 (977)
T ss_pred CCeeehHHHHHHHHHHHHHHee
Confidence 9999999999999999999874
No 9
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=7.5e-112 Score=921.09 Aligned_cols=418 Identities=31% Similarity=0.595 Sum_probs=378.2
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+++|+||||||||+.|+++|||||||+|+|+||||+|+|++++||+++++|+||+|||+|+||||+|||+||||
T Consensus 499 mY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG 578 (1044)
T PLN02915 499 HYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYG 578 (1044)
T ss_pred cccCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCch---------hHHHHh-----------------------------------------------------------
Q 014296 81 RKYDKE---------TKIELK----------------------------------------------------------- 92 (427)
Q Consensus 81 ~~~~~~---------~~~~~~----------------------------------------------------------- 92 (427)
..|.+. ...+|.
T Consensus 579 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (1044)
T PLN02915 579 YDPPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLE 658 (1044)
T ss_pred cCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 744210 000000
Q ss_pred ---h---------------------ccc---h------------hhhhhHHHHHHhhcccccccccccccccccccccCC
Q 014296 93 ---R---------------------END---S------------KREESLLELEETSKALASCTYETNTQWGKEIGLKYG 133 (427)
Q Consensus 93 ---~---------------------~~g---~------------~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~ 133 (427)
. .-| . ......++++|||++||||+||++|+||+||||.||
T Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YG 738 (1044)
T PLN02915 659 EIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYG 738 (1044)
T ss_pred ccccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCCCCCcHHHHHHHHhccccCCCccCchhHhhCcccc
Confidence 0 000 0 000124578899999999999999999999999999
Q ss_pred CCCchHHHHHHHHhCCcEEEEecCCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccc-cCcCChhhhHhhhc
Q 014296 134 CPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYA-HGKISLGLRLGYCC 212 (427)
Q Consensus 134 svtED~~tg~~lh~~GWrs~y~~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~-~~~l~~~qrl~y~~ 212 (427)
|+|||+.||++||++||||+||+|+++||.|+||+|+.++++||+|||+|++||+++++||++++ .++|+++||++|++
T Consensus 739 SvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~ 818 (1044)
T PLN02915 739 SVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYIN 818 (1044)
T ss_pred ccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999975 37899999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHhCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHH
Q 014296 213 YCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSF 292 (427)
Q Consensus 213 ~~~~~~~~~~~l~~~~~P~l~Ll~g~~~~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~ 292 (427)
..+||+.++++++|+++|++||++|++++|+++....+.++.+++++++++++|++|+|+++++|||+||+|+|+++++|
T Consensus 819 ~~~yp~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~ 898 (1044)
T PLN02915 819 TIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAH 898 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999987765555566777899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCeeeCcCCCccchhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhH
Q 014296 293 LFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYE 372 (427)
Q Consensus 293 l~a~~~~llk~lg~~~~~F~VT~K~~~~~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~ 372 (427)
++|++++++|.||+++++|+||+|+.+++..++ +++|+|+ ||++++|+++++++|++|+++|+++++++ +| +.++
T Consensus 899 Lfavl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~-~~-~~~g 973 (1044)
T PLN02915 899 LFAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINN-GY-GSWG 973 (1044)
T ss_pred HHHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhc-cc-chhH
Confidence 999999999999999999999999886554332 5788996 99999999999999999999999999876 45 5688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHHHhhh
Q 014296 373 TMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCTCFTF 425 (427)
Q Consensus 373 ~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~~~P~~~~~~s~~l~~~~~~~~~~ 425 (427)
++++|+++|+|+|+++|||++||++|+ +|+|++|++||++||++++++|+.
T Consensus 974 ~l~~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v~ 1024 (1044)
T PLN02915 974 PLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWVR 1024 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999998 689999999999999999999874
No 10
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=5.1e-111 Score=916.00 Aligned_cols=416 Identities=27% Similarity=0.527 Sum_probs=377.1
Q ss_pred CccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 1 MYSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 1 my~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
||+|||+++|||||||+||+ ++++|||||||+|+|+++||+|+|++++||+++++|+||+|||+||||||+|||+||||
T Consensus 630 mYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG 708 (1135)
T PLN02248 630 HYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYG 708 (1135)
T ss_pred cccCCchhHHhcchheecCC-CCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcC
Confidence 89999999999999999997 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCch---------------hHHHH-----------------h-----hccc---hhh---------------------
Q 014296 81 RKYDKE---------------TKIEL-----------------K-----REND---SKR--------------------- 99 (427)
Q Consensus 81 ~~~~~~---------------~~~~~-----------------~-----~~~g---~~~--------------------- 99 (427)
..+... .+++. . +.-| .+.
T Consensus 709 ~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~ 788 (1135)
T PLN02248 709 FDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKN 788 (1135)
T ss_pred cCCcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccchhhhhhhHHHhhccccccccccccc
Confidence 744210 00000 0 0000 000
Q ss_pred -----------hhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCccccccCCCc
Q 014296 100 -----------EESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDAFLGVSPT 168 (427)
Q Consensus 100 -----------~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~~af~G~aP~ 168 (427)
.....++++||++|+||+||++|+||+||||.|+|+|||+.||++||++||||+||+|+++||.|+||+
T Consensus 789 ~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~ 868 (1135)
T PLN02248 789 GRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPI 868 (1135)
T ss_pred ccccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCC
Confidence 011246789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHHhCCCcccccchhh
Q 014296 169 TLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLLKGIPLFPMISSPW 248 (427)
Q Consensus 169 ~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll~g~~~~p~~~~~~ 248 (427)
|+.++++||+|||+|++||++++++|++++ ++|+++||++|++..+||+.++++++|+++|++||++|++++|+. .++
T Consensus 869 ~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~-~~~ 946 (1135)
T PLN02248 869 NLTDRLHQVLRWATGSVEIFFSRNNALLAS-RRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTL-NVT 946 (1135)
T ss_pred CHHHHHHHHHHHhhchHHHHhccCCccccC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc-cHH
Confidence 999999999999999999999999999864 689999999999999999999999999999999999999999986 456
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCcCCCccchhhhhh
Q 014296 249 IIPFAY-VMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTEKVADEDVSQRYE 327 (427)
Q Consensus 249 ~l~~~~-~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~K~~~~~~~~~y~ 327 (427)
++++++ ++++++.++++|++|+|.++++|||+||||+|.++++|++|++++++|+||+++.+|+||+|+.+++..++|
T Consensus 947 fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~- 1025 (1135)
T PLN02248 947 FLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF- 1025 (1135)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-
Confidence 666664 467889999999999999999999999999999999999999999999999999999999999887777788
Q ss_pred hhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh
Q 014296 328 KEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSS 407 (427)
Q Consensus 328 ~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~~~P~~ 407 (427)
+|+|+|+ ||++++|+++++++|++|+++|++|++.+ .| +.|+.+++|+++++|+++++|||+|||++| |||+|++
T Consensus 1026 a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~R~i~g-~~-~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~i 1100 (1135)
T PLN02248 1026 ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVSRTIYS-EI-PQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTI 1100 (1135)
T ss_pred chheecC-cchHHHHHHHHHHHHHHHHHHHHHHHHhc-cC-cchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCee
Confidence 6899997 89999999999999999999999999876 44 567889999999999999999999999999 5789999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 014296 408 VTTKSLVLALSVCTCFTF 425 (427)
Q Consensus 408 ~~~~s~~l~~~~~~~~~~ 425 (427)
|++||++++++++++|+.
T Consensus 1101 v~v~s~ll~~~~sll~v~ 1118 (1135)
T PLN02248 1101 VYVWSGLLSITISLLWVA 1118 (1135)
T ss_pred hHHHHHHHHHHHHHHheE
Confidence 999999999999999875
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=3.5e-45 Score=401.11 Aligned_cols=326 Identities=21% Similarity=0.277 Sum_probs=263.9
Q ss_pred cCChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCC---c----cchHhHHHHhhhhhcccccccCCceeccccceee
Q 014296 3 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTK---N----ELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHR 74 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~---~----d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~R 74 (427)
+++||+|++++++|. || ++|+||+||.|+|.++ | +.+.++++.||+.+++|+|.++++++|||++++|
T Consensus 240 v~~pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iR 315 (713)
T TIGR03030 240 VPTRDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLR 315 (713)
T ss_pred CcChhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEE
Confidence 578999999999995 77 8999999999998774 2 3456778899999999999999999999999999
Q ss_pred hhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEE
Q 014296 75 REILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVY 154 (427)
Q Consensus 75 R~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y 154 (427)
|+|+++ +| ||+.++++||++++++||++|||++|
T Consensus 316 R~al~~--------------iG--------------------------------Gf~~~~vtED~~l~~rL~~~G~~~~y 349 (713)
T TIGR03030 316 REALDE--------------IG--------------------------------GIAGETVTEDAETALKLHRRGWNSAY 349 (713)
T ss_pred HHHHHH--------------cC--------------------------------CCCCCCcCcHHHHHHHHHHcCCeEEE
Confidence 999998 45 89999999999999999999999999
Q ss_pred ecCCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHH
Q 014296 155 CKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYL 234 (427)
Q Consensus 155 ~~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~L 234 (427)
+++ +.+ .|++|+|+.++++||.||++|++|+++.+ +|++ .+++++.||++|++..+|++.+++.++|+++|++++
T Consensus 350 ~~~-~~~-~g~~p~sl~~~~~Qr~RWa~G~~qi~~~~-~pl~--~~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l 424 (713)
T TIGR03030 350 LDR-PLI-AGLAPETLSGHIGQRIRWAQGMMQIFRLD-NPLL--KRGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYL 424 (713)
T ss_pred ecc-ccc-cccCCCCHHHHHHHHHHHhcChHHHHhhh-Cccc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 954 444 79999999999999999999999998765 8987 468999999999999999999999999999999999
Q ss_pred HhCCCcccccchhhHHHHHHHHHHHHHHHHHHH-HHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeee
Q 014296 235 LKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEF-LWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVV 313 (427)
Q Consensus 235 l~g~~~~p~~~~~~~l~~~~~~~~~~~~~lle~-~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~V 313 (427)
++|+++++..... ++.++ +.+++.+++.+ ...|.....||++ +..+...++.+..++.+.+++++.+|+|
T Consensus 425 ~~~~~~~~~~~~~-~~~~~---lp~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~F~V 495 (713)
T TIGR03030 425 FFGLNIFVASALE-ILAYA---LPHMLHSLLTNSYLFGRVRWPFWSE-----VYETVLAVYLLPPVLVTLLNPKKPKFNV 495 (713)
T ss_pred HhCCcceeCCHHH-HHHHH---HHHHHHHHHHHHHHcCCeecchHHH-----HHHHHHHHHHHHHHHHHHhCcCCCCcee
Confidence 9999999874221 12221 23334444443 4567777889986 3444444466677888889999999999
Q ss_pred CcCCCccchhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 014296 314 TEKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQ 393 (427)
Q Consensus 314 T~K~~~~~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~ 393 (427)
|||++..+. .+ .++++.|.++++++|++++++|++|+... . ...+..+..++++.|.+++....+.
T Consensus 496 T~Kg~~~~~--~~---------~~~~~~p~~~l~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~w~~~n~~~~~~~~~ 561 (713)
T TIGR03030 496 TPKGELLDE--DY---------FSPLSRPYLILFALILAGLAFGLYRIYGY-P--IERGVLLVVLGWNLLNLILLGAALA 561 (713)
T ss_pred cCCCccccc--cc---------cchHHHHHHHHHHHHHHHHHHHHHHHhcC-c--cccchhhHHHHHHHHHHHHHHHHHH
Confidence 999865332 11 24899999999999999999999998643 1 1123345566667777777777777
Q ss_pred HhhcccCCCCCCh
Q 014296 394 GLFLRKDNGKMPS 406 (427)
Q Consensus 394 gl~~r~~k~~~P~ 406 (427)
...+|+++++-|+
T Consensus 562 ~~~~r~QrR~~~R 574 (713)
T TIGR03030 562 VVAERRQRRSSPR 574 (713)
T ss_pred HHccCCCCCCccc
Confidence 7888888877664
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=5.3e-45 Score=400.73 Aligned_cols=324 Identities=21% Similarity=0.287 Sum_probs=251.7
Q ss_pred cCChhHHHHHhhhh-cCCCCCCeEEEEecCCccccCCCcc-------chHhHHHHhhhhhcccccccCCceeccccceee
Q 014296 3 SNNSQAVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNE-------LYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHR 74 (427)
Q Consensus 3 ~n~p~~l~~~l~~f-~Dp~~~~~vafVQ~PQ~F~n~~~~d-------~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~R 74 (427)
+++||+|++++++| .|| ++|+||+||.|+|.|+-+ ...++.+.||+.+++|+|.++++++|||++++|
T Consensus 351 ip~pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviR 426 (852)
T PRK11498 351 VPTRSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIR 426 (852)
T ss_pred CCChHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeE
Confidence 67999999999986 588 899999999999876522 234577889999999999999999999999999
Q ss_pred hhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEE
Q 014296 75 REILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVY 154 (427)
Q Consensus 75 R~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y 154 (427)
|+|+++ +| ||+.+++|||+++++++|++||+++|
T Consensus 427 ReaLee--------------VG--------------------------------Gfd~~titED~dlslRL~~~Gyrv~y 460 (852)
T PRK11498 427 RKPLDE--------------IG--------------------------------GIAVETVTEDAHTSLRLHRRGYTSAY 460 (852)
T ss_pred HHHHHH--------------hc--------------------------------CCCCCccCccHHHHHHHHHcCCEEEE
Confidence 999998 45 99999999999999999999999999
Q ss_pred ecCCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHH
Q 014296 155 CKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYL 234 (427)
Q Consensus 155 ~~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~L 234 (427)
+++ +.+ .|++|+|+.++++||.||++|++|+++. ++|++ .+++++.||++|++.+++++.+++.++|+++|++|+
T Consensus 461 l~~-~~a-~glaPesl~~~~~QR~RWarG~lQi~r~-~~pl~--~~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l 535 (852)
T PRK11498 461 MRI-PQA-AGLATESLSAHIGQRIRWARGMVQIFRL-DNPLT--GKGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFL 535 (852)
T ss_pred Eec-cce-eEECCCCHHHHHHHHHHHHHHHHHHHHH-hChhc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 954 455 6999999999999999999999999866 58987 478999999999999999999999999999999999
Q ss_pred HhCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeC
Q 014296 235 LKGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVT 314 (427)
Q Consensus 235 l~g~~~~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT 314 (427)
++|+.++.... ..++++.........+.+...+|.....||++ .+..+.++..+.. .+...+++++.+|+||
T Consensus 536 ~~gi~~i~a~~---~~i~~y~lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l~~~-~~~~ll~p~~~~F~VT 607 (852)
T PRK11498 536 LLHAYIIYAPA---LMIALFVLPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYIAPP-TTVALFNPHKGKFNVT 607 (852)
T ss_pred HhCChheeCCh---HHHHHHHHHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHHHHH-HHHHHcCccCCCcccC
Confidence 99999886422 11122221122223344445567777788876 3555566665543 3444788999999999
Q ss_pred cCCCccchhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 014296 315 EKVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQG 394 (427)
Q Consensus 315 ~K~~~~~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~g 394 (427)
||++..+ ++.++| .+..|+++++++|++|+++|++++..+ +.. ...++.++.+|.++|..++.+
T Consensus 608 pKg~~~~------~~~~~~----~~~~P~~~L~~L~l~gl~~g~~r~~~~----~~~--~~~~~~~~~~W~~~nl~~l~~ 671 (852)
T PRK11498 608 AKGGLVE------EEYVDW----VISRPYIFLVLLNLVGVAVGIWRYFYG----PPN--EILTVIVSLVWVFYNLIILGG 671 (852)
T ss_pred CCCcccc------ccceeh----HHHHHHHHHHHHHHHHHHHHHHHHHhC----Ccc--cchhhhhhHHHHHHHHHHHHH
Confidence 9986533 233455 366799999999999999999998764 111 123445667777776666544
Q ss_pred ----hhcccCCCCCC
Q 014296 395 ----LFLRKDNGKMP 405 (427)
Q Consensus 395 ----l~~r~~k~~~P 405 (427)
..+|+.+.+.|
T Consensus 672 a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 672 AVAVSVESKQVRRSH 686 (852)
T ss_pred HHHHHhcCCCCCCCc
Confidence 45555544434
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.85 E-value=2.7e-19 Score=195.07 Aligned_cols=181 Identities=13% Similarity=0.136 Sum_probs=133.3
Q ss_pred cCChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCccchHh----HHHHhhhhhcccccccC--Cceeccccceeeh
Q 014296 3 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSN----SLRIYNEVEFEGMDGYG--GPIYCGSGCFHRR 75 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~----~~~~f~~~~~~g~dg~~--g~~~~GTg~~~RR 75 (427)
+..||++++++.+|. || ++|.||+|+.+.|.+ ..++. ..+++......|++.++ ...|+|+|+++||
T Consensus 232 ~m~~d~L~~lv~~m~~dP----~vGlVQt~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~ 305 (691)
T PRK05454 232 LMSGDTLVRLVRLMEANP----RAGLIQTLPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRV 305 (691)
T ss_pred CCCHHHHHHHHHHHhhCc----CEEEEeCCccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEH
Confidence 467999999999986 88 899999999999875 23332 12344455677888766 3468999999999
Q ss_pred hhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEe
Q 014296 76 EILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYC 155 (427)
Q Consensus 76 ~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~ 155 (427)
+|+.+.+.-+.. .| ..||..++++||+++|.+|+++|||++|+
T Consensus 306 ~af~~~~glp~L-------~g------------------------------~~p~~~~~LseD~~~a~~l~~~GyrV~~~ 348 (691)
T PRK05454 306 KAFAEHCGLPPL-------PG------------------------------RGPFGGHILSHDFVEAALMRRAGWGVWLA 348 (691)
T ss_pred HHHHHhcCCccc-------cc------------------------------cCCCCCCcccHHHHHHHHHHHCCCEEEEc
Confidence 999863110000 00 12788899999999999999999999999
Q ss_pred cCCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHHHHH-HHHHHHHH
Q 014296 156 KPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLF-YSIVPSLY 233 (427)
Q Consensus 156 ~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~-~~~~P~l~ 233 (427)
|+.....+++|+|+.++.+||.||++|++|.+.. +. .+++++.+|++|+...+.++.+...++ .++.|.+.
T Consensus 349 -pd~~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~----l~--~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 349 -PDLPGSYEELPPNLLDELKRDRRWCQGNLQHLRL----LL--AKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred -CccccccccCCCCHHHHHHHHHHHHhchHHHHHH----HH--hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5533236999999999999999999999998743 22 367999999998876665555443333 33334433
No 14
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.84 E-value=3.5e-21 Score=187.38 Aligned_cols=142 Identities=16% Similarity=0.244 Sum_probs=111.0
Q ss_pred cCChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCc--cchHhHHHHhhhhhcccccccCC--ceeccccceeehhh
Q 014296 3 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKN--ELYSNSLRIYNEVEFEGMDGYGG--PIYCGSGCFHRREI 77 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~--d~~~~~~~~f~~~~~~g~dg~~g--~~~~GTg~~~RR~a 77 (427)
+++||+|++++.+|. || ++|.||+||++.|.+.- ....-++..|....+.|++.+++ .+|+||+.++||+|
T Consensus 107 ~~~p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~a 182 (254)
T cd04191 107 LMSGDTIVRLVRRMEANP----RAGIIQTAPKLIGAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAA 182 (254)
T ss_pred CCCHHHHHHHHHHHHhCC----CEEEEeCCceeECCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHH
Confidence 578999999999997 88 89999999999987631 11111345566677888887654 57899999999999
Q ss_pred hcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 78 LCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 78 L~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
|++++.-++ +| .-.||..++++||+++|++++.+|||++|. |
T Consensus 183 l~~~~~~~~--------i~-----------------------------g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~-~ 224 (254)
T cd04191 183 FMEHCALPV--------LP-----------------------------GRPPFGGHILSHDFVEAALMRRAGWEVRLA-P 224 (254)
T ss_pred HHHhcCCcc--------cc-----------------------------CCCCCCCCeecHHHHHHHHHHHcCCEEEEc-c
Confidence 976311000 11 012788899999999999999999999999 5
Q ss_pred CccccccCCCcCHHHHHHHHHHHhhhhHH
Q 014296 158 ERDAFLGVSPTTLLQFLVQRKRWSEGDFQ 186 (427)
Q Consensus 158 ~~~af~G~aP~~l~~~l~Qr~RWa~G~~q 186 (427)
+..+..+++|+++.++++||.||++|++|
T Consensus 225 ~~~~~~~~~p~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 225 DLEGSYEECPPTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred CCcceEeECCCCHHHHHHHHHHHHhhcCc
Confidence 43333589999999999999999999987
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.78 E-value=1.1e-18 Score=179.86 Aligned_cols=139 Identities=22% Similarity=0.242 Sum_probs=109.3
Q ss_pred ccCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHh----HHH-HhhhhhcccccccCCceeccccceeehh
Q 014296 2 YSNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSN----SLR-IYNEVEFEGMDGYGGPIYCGSGCFHRRE 76 (427)
Q Consensus 2 y~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~----~~~-~f~~~~~~g~dg~~g~~~~GTg~~~RR~ 76 (427)
++++||++++++..|.|++ ..|.+|.||.+.+.++....+. +.. .++.....+.+.....+++|++.++||+
T Consensus 148 ~~~~~d~l~~~~~~f~~~~---~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~ 224 (439)
T COG1215 148 TVPEPDALRELVSPFEDPP---VGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRS 224 (439)
T ss_pred CCCChhHHHHHHhhhcCCC---eeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHH
Confidence 4689999999999999885 4589999999888753111111 222 2222222233333466789999999999
Q ss_pred hhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEec
Q 014296 77 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 156 (427)
Q Consensus 77 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~ 156 (427)
||+++ | ||...++|||.++++++|.+|||+.|++
T Consensus 225 aL~~~--------------g--------------------------------~~~~~~i~ED~~lt~~l~~~G~~~~~~~ 258 (439)
T COG1215 225 ALEEV--------------G--------------------------------GWLEDTITEDADLTLRLHLRGYRVVYVP 258 (439)
T ss_pred HHHHh--------------C--------------------------------CCCCCceeccHHHHHHHHHCCCeEEEee
Confidence 99983 4 7999999999999999999999999995
Q ss_pred CCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhh
Q 014296 157 PERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 191 (427)
Q Consensus 157 p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~ 191 (427)
+ ..+ .+++|+|+.++.+||.||++|.+|++..+
T Consensus 259 ~-~~~-~~~~p~t~~~~~~Qr~RW~~g~~~~~~~~ 291 (439)
T COG1215 259 E-AIV-WTEAPETLKELWRQRLRWARGGLQVLLLH 291 (439)
T ss_pred c-ceE-eeeCcccHHHHHHHHHHHHcccceeeehh
Confidence 4 334 79999999999999999999999998653
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.77 E-value=1.5e-17 Score=173.80 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=111.9
Q ss_pred cCChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCc--cchHhHHHHhhhhhcccccccCCcee-ccccceeehhhh
Q 014296 3 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKN--ELYSNSLRIYNEVEFEGMDGYGGPIY-CGSGCFHRREIL 78 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~--d~~~~~~~~f~~~~~~g~dg~~g~~~-~GTg~~~RR~aL 78 (427)
+.+||++++.+-.|. || ++|.||.+++..|.+.- .....+...+++...++.+..+..+. +|+++.+||+++
T Consensus 167 ~~~~d~L~~lv~~~~~~~----~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al 242 (444)
T PRK14583 167 LLDKNAVPYLVAPLIANP----RTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRAL 242 (444)
T ss_pred CcCHHHHHHHHHHHHhCC----CeEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHH
Confidence 468999999998776 56 89999998877654321 11123455566667777777776654 799999999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCC
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
+++ | ||+.+.++||+++++|++.+||++.|+ |+
T Consensus 243 ~~v--------------G--------------------------------g~~~~~i~ED~dl~~rl~~~G~~i~~~-p~ 275 (444)
T PRK14583 243 ADV--------------G--------------------------------YWSPDMITEDIDISWKLQLKHWSVFFE-PR 275 (444)
T ss_pred HHc--------------C--------------------------------CCCCCcccccHHHHHHHHHcCCeEEEe-ec
Confidence 984 5 899999999999999999999999999 55
Q ss_pred ccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhc
Q 014296 159 RDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRY 192 (427)
Q Consensus 159 ~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~ 192 (427)
..+ .+++|+|+.++.+||+||++|.+|+++++.
T Consensus 276 a~~-~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~ 308 (444)
T PRK14583 276 GLC-WILMPETLRGLWKQRLRWAQGGAEVFLKNM 308 (444)
T ss_pred cEE-eeeCCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 445 699999999999999999999999987753
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.74 E-value=1.3e-16 Score=164.75 Aligned_cols=138 Identities=18% Similarity=0.216 Sum_probs=107.2
Q ss_pred cCChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCc--cchHhHHHHhhhhhcccccccCCce-eccccceeehhhh
Q 014296 3 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKN--ELYSNSLRIYNEVEFEGMDGYGGPI-YCGSGCFHRREIL 78 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~--d~~~~~~~~f~~~~~~g~dg~~g~~-~~GTg~~~RR~aL 78 (427)
+.+||++++.+..|. || +++.||.+....|.+.. .....+....++...++....+... .+|+++++||+++
T Consensus 146 ~~~~d~L~~l~~~~~~~~----~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 221 (420)
T PRK11204 146 LLDPDAAAYMVEHFLHNP----RVGAVTGNPRIRNRSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSAL 221 (420)
T ss_pred CCChhHHHHHHHHHHhCC----CeEEEECCceeccchhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHH
Confidence 468999999999995 77 89999998877664321 1111222333333444444444444 3799999999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCC
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
+++ | ||+.+.++||++.++|++.+||+..|+ |+
T Consensus 222 ~~v--------------g--------------------------------g~~~~~~~ED~~l~~rl~~~G~~i~~~-p~ 254 (420)
T PRK11204 222 HEV--------------G--------------------------------YWSTDMITEDIDISWKLQLRGWDIRYE-PR 254 (420)
T ss_pred HHh--------------C--------------------------------CCCCCcccchHHHHHHHHHcCCeEEec-cc
Confidence 983 5 899999999999999999999999999 65
Q ss_pred ccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhc
Q 014296 159 RDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRY 192 (427)
Q Consensus 159 ~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~ 192 (427)
..+ .++.|+|+.++.+||+||++|.+|.++++.
T Consensus 255 ~~~-~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~~ 287 (420)
T PRK11204 255 ALC-WILMPETLKGLWKQRLRWAQGGAEVLLKNF 287 (420)
T ss_pred cEE-EeECcccHHHHHHHHHHHhcCHHHHHHHHH
Confidence 555 699999999999999999999999987753
No 18
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.74 E-value=4.8e-17 Score=171.98 Aligned_cols=164 Identities=21% Similarity=0.210 Sum_probs=115.8
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccc----hHhHHHHhhhhhcccccccCCce-eccccceeehhh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL----YSNSLRIYNEVEFEGMDGYGGPI-YCGSGCFHRREI 77 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~----~~~~~~~f~~~~~~g~dg~~g~~-~~GTg~~~RR~a 77 (427)
..+|++++.....+ + +.++||.|+...+.+.+.. |..++...+...+..++.+++++ ++|+|+.+||++
T Consensus 170 ~v~Pd~Lr~~~~~~--~----~~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~a 243 (504)
T PRK14716 170 VIHPLELRLYNYLL--P----RHDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRA 243 (504)
T ss_pred CcCccHHHHHHhhc--C----CCCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHH
Confidence 46899998755443 3 3568999988766554432 33344444555667788999886 689999999999
Q ss_pred hcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 78 LCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 78 L~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
|+++.. ..|+ .+|+.+|+|||++.|+|++.+|||++|++
T Consensus 244 Le~l~~----------~~GG------------------------------~~fd~~sLTED~dLglRL~~~G~rv~y~p- 282 (504)
T PRK14716 244 LERLAA----------ERGG------------------------------QPFDSDSLTEDYDIGLRLKRAGFRQIFVR- 282 (504)
T ss_pred HHHHHh----------hcCC------------------------------CCCCCCCcchHHHHHHHHHHCCCEEEEec-
Confidence 986310 0010 13999999999999999999999999984
Q ss_pred Cc--------------cccccCCCcCHHHHHHHHHHHhhhh-HHHHHhh-c-CccccccCcCChhhhHhhhcccc
Q 014296 158 ER--------------DAFLGVSPTTLLQFLVQRKRWSEGD-FQIMLCR-Y-SPARYAHGKISLGLRLGYCCYCL 215 (427)
Q Consensus 158 ~~--------------~af~G~aP~~l~~~l~Qr~RWa~G~-~qi~~~~-~-~Pl~~~~~~l~~~qrl~y~~~~~ 215 (427)
+. .+..+++|+|+.++.+||.||+.|. +|...+. + .++. .+.+.+++|.+-+...+
T Consensus 283 ~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 283 VRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 33 1346889999999999999999995 7875431 1 1111 23467888887665443
No 19
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.69 E-value=3.2e-16 Score=171.97 Aligned_cols=161 Identities=16% Similarity=0.211 Sum_probs=115.8
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccc----hHhHHHHhhhhhcccccccCCce-ecccccee-eh-
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL----YSNSLRIYNEVEFEGMDGYGGPI-YCGSGCFH-RR- 75 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~----~~~~~~~f~~~~~~g~dg~~g~~-~~GTg~~~-RR- 75 (427)
+.+||+|+ .+.++.++ + ++||.|....+.+.+.. |..|+...+...+++++.++|+. +.|+|+.| ||
T Consensus 167 ~v~pd~L~-~~~~l~~~----~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~ 240 (727)
T PRK11234 167 VISPMELR-LFNYLVER----K-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRA 240 (727)
T ss_pred CCChhHHH-HHHhhcCC----C-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEeccc
Confidence 57899998 67888887 5 99999977444433332 44566666667889999998876 68999999 66
Q ss_pred -hhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEE
Q 014296 76 -EILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVY 154 (427)
Q Consensus 76 -~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y 154 (427)
++|.+.+ | ..+|..+++|||+++|++|+.+||+++|
T Consensus 241 l~al~~~g-------------g------------------------------g~~~~~~~lTED~dlg~rL~~~G~~v~f 277 (727)
T PRK11234 241 VTALLEDG-------------D------------------------------GIAFDVQSLTEDYDIGFRLKEKGMREIF 277 (727)
T ss_pred HHHHHHhc-------------C------------------------------CCCcCCCcchHHHHHHHHHHHCCCEEEE
Confidence 3565531 1 1269999999999999999999999999
Q ss_pred ecCC---------------------ccccccCCCcCHHHHHHHHHHHhhh-hHHHHHhhcCccccc---cCcCChhhhHh
Q 014296 155 CKPE---------------------RDAFLGVSPTTLLQFLVQRKRWSEG-DFQIMLCRYSPARYA---HGKISLGLRLG 209 (427)
Q Consensus 155 ~~p~---------------------~~af~G~aP~~l~~~l~Qr~RWa~G-~~qi~~~~~~Pl~~~---~~~l~~~qrl~ 209 (427)
++.. +.++....|+|+.+..+||.||..| .+|..... .|.+ .+-+.++.|-.
T Consensus 278 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~~~---~w~~~~~~~~~~~r~r~~ 354 (727)
T PRK11234 278 VRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFKTL---GWTSSLTLNYFLWRDRKG 354 (727)
T ss_pred cccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHHHh---CCCcchhhhhhhHHhhhH
Confidence 9611 1336778899999999999999999 58886432 2211 12244666655
Q ss_pred hhcccc
Q 014296 210 YCCYCL 215 (427)
Q Consensus 210 y~~~~~ 215 (427)
++...+
T Consensus 355 ~~~~~~ 360 (727)
T PRK11234 355 AITNFV 360 (727)
T ss_pred HHHHHH
Confidence 554433
No 20
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.68 E-value=3.1e-16 Score=144.36 Aligned_cols=127 Identities=25% Similarity=0.386 Sum_probs=101.2
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhhh----hhcccccccCCc-eeccccceeehhhh
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNE----VEFEGMDGYGGP-IYCGSGCFHRREIL 78 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~----~~~~g~dg~~g~-~~~GTg~~~RR~aL 78 (427)
.+||++++.+.++.|| ++++||+|+.++| .++...+-+...+. ......+..+.+ ...|+|.++||+++
T Consensus 11 ~~~d~l~~~~~~~~~~----~~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l 84 (193)
T PF13632_consen 11 LPPDFLERLVAALEDP----KVDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGMLFRREAL 84 (193)
T ss_pred CChHHHHHHHHHHhCC----CceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCccccCcceeeeHHHH
Confidence 5799999999999988 8999999999873 33444433333332 122333445544 46899999999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhccccccccccccccccccccc-CCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLK-YGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~-y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
+++ | ||+ ..+++||.+.++++..+|||..|+ |
T Consensus 85 ~~v--------------g--------------------------------~~~~~~~~~ED~~l~~~l~~~G~~~~~~-~ 117 (193)
T PF13632_consen 85 REV--------------G--------------------------------GFDDPFSIGEDMDLGFRLRRAGYRIVYV-P 117 (193)
T ss_pred HHh--------------C--------------------------------cccccccccchHHHHHHHHHCCCEEEEe-c
Confidence 984 4 898 999999999999999999999999 5
Q ss_pred CccccccCCCcCHHHHHHHHHHHhhhh
Q 014296 158 ERDAFLGVSPTTLLQFLVQRKRWSEGD 184 (427)
Q Consensus 158 ~~~af~G~aP~~l~~~l~Qr~RWa~G~ 184 (427)
+. .+...+|+|+.++++||+||+.|.
T Consensus 118 ~~-~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 118 DA-IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred cc-ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 43 347899999999999999999997
No 21
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.62 E-value=1.5e-14 Score=151.06 Aligned_cols=184 Identities=14% Similarity=0.108 Sum_probs=121.9
Q ss_pred cCChhHHHHHhhhhc-CCCCCCeEEEEecCCccccC--CCc----cchHhHHHHhhhh---hcc--c-ccccCCce-ecc
Q 014296 3 SNNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNV--TKN----ELYSNSLRIYNEV---EFE--G-MDGYGGPI-YCG 68 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~--~~~----d~~~~~~~~f~~~---~~~--g-~dg~~g~~-~~G 68 (427)
+++||++++.+..|. || +++.|+..+.-... +.+ ..+..+. .+++. ... . ....+.++ .+|
T Consensus 143 ~~~~d~L~~l~~~f~~~~----~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~l~~r~~~s~~~~~~~~sG 217 (439)
T TIGR03111 143 KLHKDAIKNMVTRFENNP----DIHAMTGVILTDKELIEKTKGRFLKLIRRC-EYFEYAQAFLAGRNFESQVNSLFTLSG 217 (439)
T ss_pred CcChHHHHHHHHHHHhCC----CeEEEEeEEecCchhhhhhcchhhhHhHHh-HHHHHHHHHHhhhHHHHhcCCeEEEcc
Confidence 468999999999997 66 68777654432110 000 0011111 11111 111 1 12223333 478
Q ss_pred ccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHh-
Q 014296 69 SGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQC- 147 (427)
Q Consensus 69 Tg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~- 147 (427)
+++++||+++.++ | ||+.++++||++++++++.
T Consensus 218 a~~~~Rr~~l~~v--------------g--------------------------------gf~~~~i~ED~~l~~rl~~~ 251 (439)
T TIGR03111 218 AFSAFRRETILKT--------------Q--------------------------------LYNSETVGEDTDMTFQIREL 251 (439)
T ss_pred HHHhhhHHHHHHh--------------C--------------------------------CCCCCCcCccHHHHHHHHHh
Confidence 8889999999983 4 8999999999999999985
Q ss_pred CCcEEEEecCCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHHHHHHH
Q 014296 148 QGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYS 227 (427)
Q Consensus 148 ~GWrs~y~~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~ 227 (427)
.|+|..|+ |+. .+.-++|+|+.+..+||.||++|.+|++....++.. ..+.++.++..+..........+|..++.
T Consensus 252 ~g~kv~~~-~~a-~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (439)
T TIGR03111 252 LDGKVYLC-ENA-IFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESAN--KSIKGFFSNFMVRRIMYDHTFAFPRMIWY 327 (439)
T ss_pred cCCeEEEC-CCC-EEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhh--hchhhhhhHHHHHHHHhhHhhHHHHHHHH
Confidence 58888888 544 446889999999999999999999999866544433 22355666655433334444467777777
Q ss_pred HHHHHHHHhCCCcc
Q 014296 228 IVPSLYLLKGIPLF 241 (427)
Q Consensus 228 ~~P~l~Ll~g~~~~ 241 (427)
+++.++.+.+.++.
T Consensus 328 ~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 328 FAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHHHhccHHH
Confidence 88888877775544
No 22
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.58 E-value=9e-15 Score=138.24 Aligned_cols=136 Identities=24% Similarity=0.403 Sum_probs=105.4
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchH----hHHHHhhhhhcccccccCCceeccccceeehhhh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYS----NSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREIL 78 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~----~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL 78 (427)
..+|++|.+.+..|.+| +++.||+|+.+.+...+ .+. .+...++......+...+..+..|+++++||+++
T Consensus 96 ~~~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~ 170 (236)
T cd06435 96 QVEPDWLKRLVPIFDDP----RVGFVQAPQDYRDGEES-LFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSAL 170 (236)
T ss_pred CcCHHHHHHHHHHhcCC----CeeEEecCccccCCCcc-HHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHH
Confidence 35799999999998777 89999999776644322 221 1122233333334444455567899999999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCC
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
..+ | ||+.+...||++.++|++.+|||..|+ |+
T Consensus 171 ~~i--------------G--------------------------------gf~~~~~~eD~dl~~r~~~~G~~~~~~-~~ 203 (236)
T cd06435 171 DDV--------------G--------------------------------GWDEWCITEDSELGLRMHEAGYIGVYV-AQ 203 (236)
T ss_pred HHh--------------C--------------------------------CCCCccccchHHHHHHHHHCCcEEEEc-ch
Confidence 984 5 788888899999999999999999999 54
Q ss_pred ccccccCCCcCHHHHHHHHHHHhhhhHHHHHhh
Q 014296 159 RDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 191 (427)
Q Consensus 159 ~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~ 191 (427)
... ....|+|+.++.+||.||+.|.+|++.++
T Consensus 204 ~~~-~~~~~~~~~~~~~q~~rw~~g~~~~~~~~ 235 (236)
T cd06435 204 SYG-HGLIPDTFEAFKKQRFRWAYGAVQILKKH 235 (236)
T ss_pred hhc-cCcCcccHHHHHHHHHHHhcchhhhhhcc
Confidence 444 68999999999999999999999998654
No 23
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.54 E-value=2e-14 Score=136.09 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=100.8
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchH---hHHHHhhhhhcccccccCCce-eccccceeehhhh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYS---NSLRIYNEVEFEGMDGYGGPI-YCGSGCFHRREIL 78 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~---~~~~~f~~~~~~g~dg~~g~~-~~GTg~~~RR~aL 78 (427)
..+|++|++...++.|| +++.||.+..+.|.+.+.... -....++.....+....+..+ .+|+++++||+++
T Consensus 99 ~~~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~ 174 (232)
T cd06437 99 VPPPDFLQKTPPYFADP----KLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECI 174 (232)
T ss_pred CCChHHHHHhhhhhcCC----CeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHH
Confidence 35899999988887787 799999988776655432211 112224445555555444443 5899999999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCC
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
+.+ | ||......||++.+.|++.+||+.+|+ |+
T Consensus 175 ~~v--------------g--------------------------------g~~~~~~~ED~~l~~rl~~~G~~~~~~-~~ 207 (232)
T cd06437 175 EDA--------------G--------------------------------GWNHDTLTEDLDLSYRAQLKGWKFVYL-DD 207 (232)
T ss_pred HHh--------------C--------------------------------CCCCCcchhhHHHHHHHHHCCCeEEEe-cc
Confidence 884 5 898888999999999999999999999 65
Q ss_pred ccccccCCCcCHHHHHHHHHHHhhhh
Q 014296 159 RDAFLGVSPTTLLQFLVQRKRWSEGD 184 (427)
Q Consensus 159 ~~af~G~aP~~l~~~l~Qr~RWa~G~ 184 (427)
..+ ....|+|+.++++||+||+.|.
T Consensus 208 ~~v-~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 208 VVV-PAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred cee-eeeCCcCHHHHHHHHHHhccCC
Confidence 544 7999999999999999999983
No 24
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.53 E-value=2.6e-14 Score=134.16 Aligned_cols=133 Identities=35% Similarity=0.590 Sum_probs=110.7
Q ss_pred CChhHHHHHhhhhcC-CCCCCeEEEEecCCccccCCCcc----chHhHHHHhhhhhcccccccCCceeccccceeehhhh
Q 014296 4 NNSQAVRDALCFFMD-EEKGHEFAFVQFPQNFDNVTKNE----LYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREIL 78 (427)
Q Consensus 4 n~p~~l~~~l~~f~D-p~~~~~vafVQ~PQ~F~n~~~~d----~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL 78 (427)
.+|+++.+.+..+.+ | +++.|++++.+.+.+..+ .+......++.....+.+..+...+.|++.++||+++
T Consensus 97 ~~~~~l~~l~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~ 172 (234)
T cd06421 97 PTPDFLRRTLGYFLDDP----KVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREAL 172 (234)
T ss_pred cCccHHHHHHHHHhcCC----CeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHH
Confidence 478999999999986 6 899999999998777542 2344455666666667666677788999999999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCC
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
+.+ | |+......||++.+.+++++||+..|++ +
T Consensus 173 ~~i--------------g--------------------------------~~~~~~~~eD~~l~~r~~~~g~~i~~~~-~ 205 (234)
T cd06421 173 DEI--------------G--------------------------------GFPTDSVTEDLATSLRLHAKGWRSVYVP-E 205 (234)
T ss_pred HHh--------------C--------------------------------CCCccceeccHHHHHHHHHcCceEEEec-C
Confidence 983 4 7877788999999999999999999994 4
Q ss_pred ccccccCCCcCHHHHHHHHHHHhhhhHHHH
Q 014296 159 RDAFLGVSPTTLLQFLVQRKRWSEGDFQIM 188 (427)
Q Consensus 159 ~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~ 188 (427)
..+ .+..|+++.++++|+.||..|.+|++
T Consensus 206 ~~~-~~~~~~~~~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 206 PLA-AGLAPETLAAYIKQRLRWARGMLQIL 234 (234)
T ss_pred ccc-cccCCccHHHHHHHHHHHhcCCeeeC
Confidence 444 79999999999999999999999863
No 25
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.51 E-value=2.9e-13 Score=147.56 Aligned_cols=140 Identities=14% Similarity=0.158 Sum_probs=107.3
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCc-cccCCCc---cchHhHHHHhhhhhcccccccCCcee-ccccceeehhh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQN-FDNVTKN---ELYSNSLRIYNEVEFEGMDGYGGPIY-CGSGCFHRREI 77 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~-F~n~~~~---d~~~~~~~~f~~~~~~g~dg~~g~~~-~GTg~~~RR~a 77 (427)
+++|++|+. |-++.+. + .+||.|-. ..|...+ ..|..|+...|+..++++..+++++. .|||+.|||+|
T Consensus 175 ~~~P~~L~~-~~~~~~~----~-~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~a 248 (703)
T PRK15489 175 VLHPLELKY-FNYLLPR----K-DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRA 248 (703)
T ss_pred CCChhHHHH-HHhhcCC----c-ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHH
Confidence 579999975 4677654 1 46998832 2222222 24777889999999999999999985 89999999999
Q ss_pred hcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 78 LCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 78 L~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
|..+-. .| .| .+|..+|+|||++.|+||+.+|||+.|+.-
T Consensus 249 L~~l~~-----------~g--------------------------g~---~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~ 288 (703)
T PRK15489 249 LLALMK-----------ER--------------------------GN---QPFNTSSLTEDYDFSFRLAELGMQEIFVRF 288 (703)
T ss_pred HHHHHH-----------hc--------------------------CC---CCCCCCCchHhHHHHHHHHHCCCceEEEEE
Confidence 876300 11 00 168889999999999999999999999321
Q ss_pred ---------------------CccccccCCCcCHHHHHHHHHHHhhhhH-HHH
Q 014296 158 ---------------------ERDAFLGVSPTTLLQFLVQRKRWSEGDF-QIM 188 (427)
Q Consensus 158 ---------------------~~~af~G~aP~~l~~~l~Qr~RWa~G~~-qi~ 188 (427)
...+.+...|.|+.+.++|+.||-.|-. |-.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 289 PVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred eccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1367788999999999999999999988 663
No 26
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.50 E-value=8.4e-14 Score=132.99 Aligned_cols=137 Identities=23% Similarity=0.339 Sum_probs=108.2
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccc---hHhHHHHhhhhhcccccccCCce-eccccceeehhhhc
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL---YSNSLRIYNEVEFEGMDGYGGPI-YCGSGCFHRREILC 79 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~---~~~~~~~f~~~~~~g~dg~~g~~-~~GTg~~~RR~aL~ 79 (427)
.+|+++.+.+.+|.+. +++++.||.+..++|..++-. +..+....++...++.+..+.+. ++|+++++||++++
T Consensus 97 ~~~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~ 174 (241)
T cd06427 97 PDPDQLKKAVAAFARL--DDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR 174 (241)
T ss_pred CChHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH
Confidence 5799999999998731 128999999988877644321 22333445566667777666665 47899999999999
Q ss_pred CCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCc
Q 014296 80 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPER 159 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~ 159 (427)
++ | ||.....+||++.++|++.+|||..++ |..
T Consensus 175 ~v--------------g--------------------------------g~~~~~~~eD~~l~~rl~~~G~r~~~~-~~~ 207 (241)
T cd06427 175 EL--------------G--------------------------------GWDPFNVTEDADLGLRLARAGYRTGVL-NST 207 (241)
T ss_pred Hc--------------C--------------------------------CCCcccchhhHHHHHHHHHCCceEEEe-ccc
Confidence 84 4 888778899999999999999999999 433
Q ss_pred cccccCCCcCHHHHHHHHHHHhhhhHHHHHhh
Q 014296 160 DAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 191 (427)
Q Consensus 160 ~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~ 191 (427)
.....|+|+.++++||.||+.|.+|++..+
T Consensus 208 --~~~~~~~~~~~~~~q~~Rw~~g~~~~~~~~ 237 (241)
T cd06427 208 --TLEEANNALGNWIRQRSRWIKGYMQTWLVH 237 (241)
T ss_pred --ccccCcHhHHHHHHHHHHHhccHHHHHHHH
Confidence 258899999999999999999999998653
No 27
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.46 E-value=4.6e-14 Score=132.52 Aligned_cols=126 Identities=26% Similarity=0.355 Sum_probs=81.4
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHh----hhhhcccccccCCceeccccceeehhhhc
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIY----NEVEFEGMDGYGGPIYCGSGCFHRREILC 79 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f----~~~~~~g~dg~~g~~~~GTg~~~RR~aL~ 79 (427)
.+|++|++++.+|.|| ++++||++..+++ +++. +..-+..+ +.....+....+.+.++|+++++||++++
T Consensus 99 ~~p~~l~~~~~~~~~~----~~~~v~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~ 172 (228)
T PF13641_consen 99 LDPDWLERLLAAFADP----GVGAVGGPVFPDN-DRNW-LTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE 172 (228)
T ss_dssp E-CHHHHHHHHHHHBS----S--EEEEEEEETT-CCCE-EEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH
T ss_pred ECHHHHHHHHHHHHhC----CCCeEeeeEeecC-CCCH-HHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH
Confidence 4899999999999888 8999998886665 3322 11111112 12233444555666679999999999998
Q ss_pred CCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCc
Q 014296 80 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPER 159 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~ 159 (427)
+ +| ||+.....||.+.+++++.+||++.|+ |+.
T Consensus 173 ~--------------~g--------------------------------~fd~~~~~eD~~l~~r~~~~G~~~~~~-~~~ 205 (228)
T PF13641_consen 173 E--------------VG--------------------------------GFDPFILGEDFDLCLRLRAAGWRIVYA-PDA 205 (228)
T ss_dssp H--------------H---------------------------------S--SSSSSHHHHHHHHHHHTT--EEEE-EEE
T ss_pred H--------------hC--------------------------------CCCCCCcccHHHHHHHHHHCCCcEEEE-CCc
Confidence 8 34 888888899999999999999999999 544
Q ss_pred cccccCCCcCHHHHHHHHHHHhhh
Q 014296 160 DAFLGVSPTTLLQFLVQRKRWSEG 183 (427)
Q Consensus 160 ~af~G~aP~~l~~~l~Qr~RWa~G 183 (427)
. +....|.++.++.+||.||+.|
T Consensus 206 ~-v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 206 L-VYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp E-EEE--SSSTHHHHHHHHHHH--
T ss_pred E-EEEeCCCCHHHHHHHHhccCcC
Confidence 4 4799999999999999999987
No 28
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.41 E-value=2.6e-13 Score=130.61 Aligned_cols=152 Identities=21% Similarity=0.097 Sum_probs=99.4
Q ss_pred cCChhHHHHHhhhh-cCCCCCCeEEEEecCCccccCCCccchHhH---HHHhhhhhcccccccCCce-eccccceeehhh
Q 014296 3 SNNSQAVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNELYSNS---LRIYNEVEFEGMDGYGGPI-YCGSGCFHRREI 77 (427)
Q Consensus 3 ~n~p~~l~~~l~~f-~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~---~~~f~~~~~~g~dg~~g~~-~~GTg~~~RR~a 77 (427)
+.+|++|++.+.+| .|| ++|.||..+...|...+-.-..+ ....+.....+.+.++... ..|++.++||++
T Consensus 85 ~~~~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~~~~~~s~~g~~~~~~G~~~~~R~~~ 160 (244)
T cd04190 85 KFDPDSIVQLYKAMDKDP----EIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEA 160 (244)
T ss_pred cCCHhHHHHHHHHHHhCC----CEEEEEeeeEEcCCcchhHHHhHheehhhhhhhcccHHHcCCceEECCCceEEEEehh
Confidence 35899999999998 488 89999999887765433221111 1111112223334444443 579999999999
Q ss_pred hcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEE--e
Q 014296 78 LCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVY--C 155 (427)
Q Consensus 78 L~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y--~ 155 (427)
+++++... ..+..++|..+|.-- ..+....+++||.+.+++|..+|||..| +
T Consensus 161 l~~~~~~~-------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~ 214 (244)
T cd04190 161 LKGDNGGK-------------------------GPLLDYAYLTNTVDS-LHKKNNLDLGEDRILCTLLLKAGPKRKYLYV 214 (244)
T ss_pred hcCCcccc-------------------------ccchhhccccCcccc-hHHHHHHhHhcccceeHHHhccCCccEEEEe
Confidence 99852100 000000111111000 0123446689999999999999999999 7
Q ss_pred cCCccccccCCCcCHHHHHHHHHHHhhhhHH
Q 014296 156 KPERDAFLGVSPTTLLQFLVQRKRWSEGDFQ 186 (427)
Q Consensus 156 ~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~q 186 (427)
|+..+ ..++|+|+.++++||+||+.|++.
T Consensus 215 -~~a~~-~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 215 -PGAVA-ETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred -cccEE-EEECCCCHHHHHHHhHhhhccccc
Confidence 65444 799999999999999999999863
No 29
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.09 E-value=2.5e-10 Score=106.33 Aligned_cols=131 Identities=19% Similarity=0.151 Sum_probs=91.8
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHH-hhhhhcccccccCCce-eccccceeehhhhcC
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRI-YNEVEFEGMDGYGGPI-YCGSGCFHRREILCG 80 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~-f~~~~~~g~dg~~g~~-~~GTg~~~RR~aL~~ 80 (427)
...|+++.+.+..+.++ +.+.|+.++.+...+.......+... .......+..+.+.+. +.|++.++||++++.
T Consensus 94 ~~~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~ 169 (229)
T cd04192 94 VVPSNWLLTFVAFIQKE----QIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFE 169 (229)
T ss_pred ccCHHHHHHHHHHhhcC----CCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHH
Confidence 35799999999988776 67889998887622211111111111 1112222333344443 578999999999998
Q ss_pred CCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccC--CCCCchHHHHHHHHhCCc-EEEEecC
Q 014296 81 RKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITGISIQCQGW-KSVYCKP 157 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y--~svtED~~tg~~lh~~GW-rs~y~~p 157 (427)
+ | ||+. ...+||.+..++++.+|| +..|+..
T Consensus 170 ~--------------g--------------------------------gf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~ 203 (229)
T cd04192 170 V--------------G--------------------------------GFEGNDHIASGDDELLLAKVASKYPKVAYLKN 203 (229)
T ss_pred h--------------c--------------------------------CCccccccccCCHHHHHHHHHhCCCCEEEeeC
Confidence 3 5 7863 567899999999999999 9988743
Q ss_pred CccccccCCCcCHHHHHHHHHHHhhh
Q 014296 158 ERDAFLGVSPTTLLQFLVQRKRWSEG 183 (427)
Q Consensus 158 ~~~af~G~aP~~l~~~l~Qr~RWa~G 183 (427)
.........|+++.++.+||+||+.|
T Consensus 204 ~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 204 PEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred cchheecCCchhHHHHHHHHHHhhcC
Confidence 22334788999999999999999987
No 30
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.09 E-value=2.7e-10 Score=107.21 Aligned_cols=140 Identities=23% Similarity=0.188 Sum_probs=94.1
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHHHhh----hhhcccccccCCc-eeccccceeehhh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYN----EVEFEGMDGYGGP-IYCGSGCFHRREI 77 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~----~~~~~g~dg~~g~-~~~GTg~~~RR~a 77 (427)
..+|++|++.+..|.|| +++.|+..+.+.+.+.+ .+......++ ..........++. ...|...++||++
T Consensus 89 ~~~~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~ 163 (235)
T cd06434 89 VWPPNALPEMLKPFEDP----KVGGVGTNQRILRPRDS-KWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEI 163 (235)
T ss_pred eeChhHHHHHHHhccCC----CEeEEcCceEeecCccc-HHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHH
Confidence 35799999999999887 89999999888876422 1111111111 1111222333333 3468888999999
Q ss_pred hcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 78 LCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 78 L~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
++.....+....++ ++-......||.+.+.+++.+||+..|+ |
T Consensus 164 l~~~~~~~~~~~~~------------------------------------~~~~~~~~~eD~~l~~~~~~~g~~~~~~-~ 206 (235)
T cd06434 164 LKDFLFLEEFTNET------------------------------------FMGRRLNAGDDRFLTRYVLSHGYKTVYQ-Y 206 (235)
T ss_pred HhhhhhHHHhhhhh------------------------------------hcCCCCCcCchHHHHHHHHHCCCeEEEe-c
Confidence 98743211111110 0112235789999999999999999999 5
Q ss_pred CccccccCCCcCHHHHHHHHHHHhhhhH
Q 014296 158 ERDAFLGVSPTTLLQFLVQRKRWSEGDF 185 (427)
Q Consensus 158 ~~~af~G~aP~~l~~~l~Qr~RWa~G~~ 185 (427)
+..+ ....|.++.++++||+||++|..
T Consensus 207 ~~~~-~~~~~~~~~~~~~q~~Rw~~~~~ 233 (235)
T cd06434 207 TSEA-YTETPENYKKFLKQQLRWSRSNW 233 (235)
T ss_pred CCeE-EEEcchhHHHHHHHhhhhhhccc
Confidence 4555 56799999999999999999974
No 31
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.03 E-value=6.7e-10 Score=113.76 Aligned_cols=128 Identities=18% Similarity=0.173 Sum_probs=89.4
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHHH-----HhhhhhcccccccCC-ceeccccceeehh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSLR-----IYNEVEFEGMDGYGG-PIYCGSGCFHRRE 76 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~-----~f~~~~~~g~dg~~g-~~~~GTg~~~RR~ 76 (427)
+.+||+|++.+..|.|| +++.|+++.... +.+.....-.. .++..... .+..+. .++.|++.++||+
T Consensus 138 ~~~p~~L~~lv~~~~~~----~v~~V~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~a~RR~ 210 (373)
T TIGR03472 138 SVGPDYLRQVVAPLADP----DVGLVTCLYRGR--PVPGFWSRLGAMGINHNFLPSVMV-ARALGRARFCFGATMALRRA 210 (373)
T ss_pred CcChhHHHHHHHHhcCC----CcceEeccccCC--CCCCHHHHHHHHHhhhhhhHHHHH-HHhccCCccccChhhheeHH
Confidence 45899999999999888 799999874422 22222111111 11111111 111222 3467999999999
Q ss_pred hhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccC--CCCCchHHHHHHHHhCCcEEEE
Q 014296 77 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITGISIQCQGWKSVY 154 (427)
Q Consensus 77 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y--~svtED~~tg~~lh~~GWrs~y 154 (427)
+++++ | ||+. ++++||++++.+++.+||+..|
T Consensus 211 ~l~~i--------------G--------------------------------Gf~~~~~~~~ED~~l~~~i~~~G~~v~~ 244 (373)
T TIGR03472 211 TLEAI--------------G--------------------------------GLAALAHHLADDYWLGELVRALGLRVVL 244 (373)
T ss_pred HHHHc--------------C--------------------------------ChHHhcccchHHHHHHHHHHHcCCeEEe
Confidence 99984 5 7763 6689999999999999999999
Q ss_pred ecCCccccccCCCcCHHHHHHHHHHHhhhhH
Q 014296 155 CKPERDAFLGVSPTTLLQFLVQRKRWSEGDF 185 (427)
Q Consensus 155 ~~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~ 185 (427)
+ |+... ....|+|+.++++||.||++..-
T Consensus 245 ~-~~~v~-~~~~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 245 A-PVVVD-TDVHETSFATLLAHELRWSRTIR 273 (373)
T ss_pred c-chhhh-cCCCccCHHHHHHHHHHHHhhhh
Confidence 8 44333 57888999999999999975443
No 32
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.98 E-value=6.7e-10 Score=102.74 Aligned_cols=70 Identities=27% Similarity=0.360 Sum_probs=60.0
Q ss_pred eeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccC--CCCCchHHHH
Q 014296 65 IYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITG 142 (427)
Q Consensus 65 ~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y--~svtED~~tg 142 (427)
+..|+++++||++++.+ | ||+. ..+.||++.+
T Consensus 123 ~~~g~~~~~r~~~~~~~--------------g--------------------------------gf~~~~~~~~eD~~l~ 156 (196)
T cd02520 123 CAFGKSMALRREVLDAI--------------G--------------------------------GFEAFADYLAEDYFLG 156 (196)
T ss_pred cccCceeeeEHHHHHhc--------------c--------------------------------ChHHHhHHHHHHHHHH
Confidence 67899999999999984 4 6643 3468999999
Q ss_pred HHHHhCCcEEEEecCCccccccCCCcCHHHHHHHHHHHhh
Q 014296 143 ISIQCQGWKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSE 182 (427)
Q Consensus 143 ~~lh~~GWrs~y~~p~~~af~G~aP~~l~~~l~Qr~RWa~ 182 (427)
+|+..+||+..|+ |+.. +....|+++.++++||.||++
T Consensus 157 ~rl~~~G~~i~~~-~~~~-~~~~~~~~~~~~~~q~~rw~~ 194 (196)
T cd02520 157 KLIWRLGYRVVLS-PYVV-MQPLGSTSLASFWRRQLRWSR 194 (196)
T ss_pred HHHHHcCCeEEEc-chhe-eccCCcccHHHHHHHHHHHhc
Confidence 9999999999999 5544 468999999999999999986
No 33
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=98.83 E-value=1.1e-08 Score=94.35 Aligned_cols=124 Identities=16% Similarity=0.181 Sum_probs=88.7
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCcc-chHhHHHHh-hhhhcccccccCCceeccccceeehhhhcCC
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNE-LYSNSLRIY-NEVEFEGMDGYGGPIYCGSGCFHRREILCGR 81 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d-~~~~~~~~f-~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~~ 81 (427)
.+||.|++.+..+.|| ++|.|..+..+.+.+.-. ........+ ..+.+. .-+.++..|..+.+||++|++
T Consensus 44 v~p~~L~~lv~~l~~p----~vglVt~~~~~~~~~~~~~~l~~~~~~~~~~~~~a---~~~~~~~~G~~m~~rr~~L~~- 115 (175)
T PF13506_consen 44 VPPDYLRELVAPLADP----GVGLVTGLPRGVPARGFWSRLEAAFFNFLPGVLQA---LGGAPFAWGGSMAFRREALEE- 115 (175)
T ss_pred ECHHHHHHHHHHHhCC----CCcEEEecccccCCcCHHHHHHHHHHhHHHHHHHH---hcCCCceecceeeeEHHHHHH-
Confidence 4799999999999999 899998876655444211 111111111 222222 225567899999999999998
Q ss_pred CCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccC--CCCCchHHHHHHHHhCCcEEEEecCCc
Q 014296 82 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITGISIQCQGWKSVYCKPER 159 (427)
Q Consensus 82 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y--~svtED~~tg~~lh~~GWrs~y~~p~~ 159 (427)
+| |+.. +.++||+..|-+++.+|||.+.... +
T Consensus 116 -------------~G--------------------------------G~~~l~~~ladD~~l~~~~~~~G~~v~~~~~-~ 149 (175)
T PF13506_consen 116 -------------IG--------------------------------GFEALADYLADDYALGRRLRARGYRVVLSPY-P 149 (175)
T ss_pred -------------cc--------------------------------cHHHHhhhhhHHHHHHHHHHHCCCeEEEcch-h
Confidence 45 5533 5699999999999999999999842 2
Q ss_pred cccccCCC----cCHHHHHHHHHHHhh
Q 014296 160 DAFLGVSP----TTLLQFLVQRKRWSE 182 (427)
Q Consensus 160 ~af~G~aP----~~l~~~l~Qr~RWa~ 182 (427)
+.....| .++.++++++.||++
T Consensus 150 -v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 150 -VVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred -eeecccCccccccHHHHHHHHHhhcC
Confidence 2234555 589999999999974
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=98.67 E-value=5.8e-08 Score=92.49 Aligned_cols=128 Identities=19% Similarity=0.135 Sum_probs=87.1
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhH-HHHhhhhhcccccccCC-ceeccccceeehhhhcCC
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNS-LRIYNEVEFEGMDGYGG-PIYCGSGCFHRREILCGR 81 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~-~~~f~~~~~~g~dg~~g-~~~~GTg~~~RR~aL~~~ 81 (427)
.+|+++++.+..+.|+ +++.|+......+.+. ...... ...+...........+. ....|++..+||+++.+
T Consensus 122 ~~~~~l~~l~~~~~~~----~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~- 195 (251)
T cd06439 122 LDPDALRLLVRHFADP----SVGAVSGELVIVDGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFRP- 195 (251)
T ss_pred cCHHHHHHHHHHhcCC----CccEEEeEEEecCCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhcC-
Confidence 4699999999999777 7999998776654432 111111 11111111111111222 22455555688988874
Q ss_pred CCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCCccc
Q 014296 82 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPERDA 161 (427)
Q Consensus 82 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~~~a 161 (427)
+......||.+++.++..+||+..|+ |+...
T Consensus 196 ------------------------------------------------~~~~~~~eD~~l~~~~~~~G~~~~~~-~~~~~ 226 (251)
T cd06439 196 ------------------------------------------------LPADTINDDFVLPLRIARQGYRVVYE-PDAVA 226 (251)
T ss_pred ------------------------------------------------CCcccchhHHHHHHHHHHcCCeEEec-cccEE
Confidence 34445679999999999999999998 54444
Q ss_pred cccCCCcCHHHHHHHHHHHhhhhHHH
Q 014296 162 FLGVSPTTLLQFLVQRKRWSEGDFQI 187 (427)
Q Consensus 162 f~G~aP~~l~~~l~Qr~RWa~G~~qi 187 (427)
....|++..+.++|+.||+.|.+|.
T Consensus 227 -~~~~~~~~~~~~~~~~r~~~g~~~~ 251 (251)
T cd06439 227 -YEEVAEDGSEEFRRRVRIAAGNLQA 251 (251)
T ss_pred -EEeCcccHHHHHHHHHHHHhccccC
Confidence 7999999999999999999999873
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=98.53 E-value=4.9e-07 Score=85.20 Aligned_cols=136 Identities=13% Similarity=0.015 Sum_probs=89.1
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCcc-chHhHHHHhhhhhcccccccC---Cceeccccceeehhhhc
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNE-LYSNSLRIYNEVEFEGMDGYG---GPIYCGSGCFHRREILC 79 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d-~~~~~~~~f~~~~~~g~dg~~---g~~~~GTg~~~RR~aL~ 79 (427)
.+|+++.+.+..+.++ +...|+.+....+.+... .........+........... .....|.+.++||+++.
T Consensus 94 ~~~~~l~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (249)
T cd02525 94 YPKDYILELVEALKRT----GADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFE 169 (249)
T ss_pred CCHHHHHHHHHHHhcC----CCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHH
Confidence 5799999999888877 566666553322221110 000111111111111111111 23567888999999998
Q ss_pred CCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCC-CCCchHHHHHHHHhCCcEEEEecCC
Q 014296 80 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~-svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
.. | |++.. ...||.+.+++++.+|++..|+ |+
T Consensus 170 ~~--------------g--------------------------------~~~~~~~~~eD~~l~~r~~~~G~~~~~~-~~ 202 (249)
T cd02525 170 KV--------------G--------------------------------GFDESLVRNEDAELNYRLRKAGYKIWLS-PD 202 (249)
T ss_pred Hh--------------C--------------------------------CCCcccCccchhHHHHHHHHcCcEEEEc-CC
Confidence 73 3 45443 2469999999999999999999 54
Q ss_pred ccccccCCCcCHHHHHHHHHHHhhhhHHHHHhh
Q 014296 159 RDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCR 191 (427)
Q Consensus 159 ~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~ 191 (427)
..+ .-..|.++.++.+|+.||+.|..|....+
T Consensus 203 ~~~-~~~~~~s~~~~~~~~~r~~~~~~~~~~~~ 234 (249)
T cd02525 203 IRV-YYYPRSTLKKLARQYFRYGKWRARTLRKH 234 (249)
T ss_pred eEE-EEcCCCCHHHHHHHHHHHhhhhHHHHHhC
Confidence 444 56788999999999999999999997653
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=98.26 E-value=1e-06 Score=81.36 Aligned_cols=75 Identities=23% Similarity=0.096 Sum_probs=60.0
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccc---hHhHHHHhhhhhcccccccCCceeccccceeehhhhc
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL---YSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILC 79 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~---~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~ 79 (427)
..+|++++++..+|.|| +++.||.+.++.|.+.+-. ...+....+..++.++...+...++|+|+++||++|+
T Consensus 101 ~~~~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~ 176 (191)
T cd06436 101 RLDPNALEAVAPYFSDP----RVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALD 176 (191)
T ss_pred CcCHhHHHHHHHhhcCC----ceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHH
Confidence 46899999998888888 8999999999998766532 3334555566788888877765679999999999999
Q ss_pred CC
Q 014296 80 GR 81 (427)
Q Consensus 80 ~~ 81 (427)
++
T Consensus 177 ~v 178 (191)
T cd06436 177 GL 178 (191)
T ss_pred Hh
Confidence 84
No 37
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.22 E-value=0.00049 Score=72.43 Aligned_cols=163 Identities=13% Similarity=0.145 Sum_probs=114.6
Q ss_pred hHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCccchHhHH----HHhhhhhcccccccCCc--eeccccceeehhhhc
Q 014296 7 QAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSL----RIYNEVEFEGMDGYGGP--IYCGSGCFHRREILC 79 (427)
Q Consensus 7 ~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~----~~f~~~~~~g~dg~~g~--~~~GTg~~~RR~aL~ 79 (427)
|.+-+.+--+. || +.|.+||--.-.|.+ ..|+--+ +++=-+...|..-|++. -|=|-|+++|-++..
T Consensus 256 d~lvrLv~~ME~~P----~aGlIQt~P~~~gg~--TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~ 329 (736)
T COG2943 256 DCLVRLVRLMEANP----DAGLIQTSPKASGGD--TLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFI 329 (736)
T ss_pred hHHHHHHHHHhhCC----CCceeecchhhcCcc--hHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhH
Confidence 44444444443 66 899999965444333 4554322 23334566788888765 488999999999985
Q ss_pred C---CCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEec
Q 014296 80 G---RKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCK 156 (427)
Q Consensus 80 ~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~ 156 (427)
+ +++- .|. .-|..+-++-|..-.--|.+.||-..-.
T Consensus 330 ~hcgLp~L----------pG~------------------------------~pFgG~ilSHDfvEAALmRRaGW~v~ia- 368 (736)
T COG2943 330 EHCGLPPL----------PGR------------------------------GPFGGHILSHDFVEAALMRRAGWGVWIA- 368 (736)
T ss_pred HhcCCCCC----------CCC------------------------------CCCCccccchHHHHHHHHhhcCceEEEe-
Confidence 4 2221 110 1344556889999999999999977555
Q ss_pred CCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHH
Q 014296 157 PERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLA 222 (427)
Q Consensus 157 p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~ 222 (427)
++...-+.+.|.|+.|.++..+|||+|++|-+ +++ +.+++.+..|+.++.+.+.++++..
T Consensus 369 ~dL~GSyEE~PpnLlD~l~RDRRWC~GNLqh~-----rl~-~~~GlHwvsR~h~~tGVmsYlsaPl 428 (736)
T COG2943 369 YDLDGSYEELPPNLLDELKRDRRWCHGNLQHF-----RLF-LVKGLHWVSRAHFLTGVMSYLSAPL 428 (736)
T ss_pred ccCCCchhhCCchHHHHHhhhhHhhhcchhhc-----eee-ccCCccHHHHHHHHHHHHHHHhhHH
Confidence 66677789999999999999999999999975 233 2578999999888877666555433
No 38
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=98.10 E-value=3.2e-05 Score=79.67 Aligned_cols=127 Identities=12% Similarity=0.023 Sum_probs=79.7
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccc-hHhHHHHhhhhhc---cccccc-CCceeccccceeehhhh
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL-YSNSLRIYNEVEF---EGMDGY-GGPIYCGSGCFHRREIL 78 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~-~~~~~~~f~~~~~---~g~dg~-~g~~~~GTg~~~RR~aL 78 (427)
.+|+.+++.+..+.++ ++++|..+-++...+.-+. .......++.... ...+.. ......|.+.++||+++
T Consensus 146 ~~p~~l~~lv~~~~~~----~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~ 221 (384)
T TIGR03469 146 HGPDNLARLVARARAE----GLDLVSLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREAL 221 (384)
T ss_pred CChhHHHHHHHHHHhC----CCCEEEecccccCCCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHH
Confidence 5799999999998876 4566654433322110010 0001111111111 011111 12235788999999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccC--CCCCchHHHHHHHHhCCcEEEEec
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY--GCPVEDVITGISIQCQGWKSVYCK 156 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y--~svtED~~tg~~lh~~GWrs~y~~ 156 (427)
+++ | ||+. ..+.||++.+.++..+|++..+..
T Consensus 222 ~~v--------------G--------------------------------Gf~~~~~~~~ED~~L~~r~~~~G~~v~~~~ 255 (384)
T TIGR03469 222 ERI--------------G--------------------------------GIAAIRGALIDDCTLAAAVKRSGGRIWLGL 255 (384)
T ss_pred HHc--------------C--------------------------------CHHHHhhCcccHHHHHHHHHHcCCcEEEEe
Confidence 984 5 6653 568999999999999999999985
Q ss_pred CCccccccCCCcCHHHHHHHHHHHh
Q 014296 157 PERDAFLGVSPTTLLQFLVQRKRWS 181 (427)
Q Consensus 157 p~~~af~G~aP~~l~~~l~Qr~RWa 181 (427)
.. ....-..-+++.+..+|+.||+
T Consensus 256 ~~-~~~s~r~~~~~~~~~~~~~r~~ 279 (384)
T TIGR03469 256 AA-RTRSLRPYDGLGEIWRMIARTA 279 (384)
T ss_pred cC-ceEEEEecCCHHHHHHHHHHhH
Confidence 53 3322344568999999999994
No 39
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=97.89 E-value=0.00033 Score=74.95 Aligned_cols=150 Identities=17% Similarity=0.128 Sum_probs=87.9
Q ss_pred CChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCccchHhH-HHHhh-hhhcccccccCCce-e-ccccceeehhhh
Q 014296 4 NNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNS-LRIYN-EVEFEGMDGYGGPI-Y-CGSGCFHRREIL 78 (427)
Q Consensus 4 n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~-~~~f~-~~~~~g~dg~~g~~-~-~GTg~~~RR~aL 78 (427)
-+|+.+.+.+--+. || +++-|..--+-.|...+-...-| .+.+. +..+++....=|.+ | -|.-+++|-+|+
T Consensus 214 ~~p~~~~~lv~~m~~d~----~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~VtCLPGcfsmyR~~a~ 289 (527)
T PF03142_consen 214 FDPDSVNRLVDAMERDP----KIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSVTCLPGCFSMYRISAL 289 (527)
T ss_pred EcHHHHHHHHHHHcCCC----CeEEEeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCceeecCCcceeeeeehh
Confidence 36888888888775 77 67777664444555443221111 11111 23334444433333 3 688899999999
Q ss_pred cCCC----C---CchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhC--C
Q 014296 79 CGRK----Y---DKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQ--G 149 (427)
Q Consensus 79 ~~~~----~---~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~--G 149 (427)
.... | ++++-++... ...+.+.+ -.-..+-||=.....|..+ |
T Consensus 290 ~~~~~~~~p~l~~~~i~~~Y~~-------~~~dtlh~---------------------~nl~~lGEDR~LttLlLk~~~~ 341 (527)
T PF03142_consen 290 MDGDGYWVPLLISPDIIEKYSE-------NPVDTLHQ---------------------KNLLDLGEDRWLTTLLLKQFPG 341 (527)
T ss_pred ccccccccccccchHHHHHHhh-------ccchHHHH---------------------HhhhhcchhHHHHHHHHhhCCC
Confidence 8621 1 0111111100 00000000 0012367998877666665 8
Q ss_pred cEEEEecCCccccccCCCcCHHHHHHHHHHHhhhhHHH
Q 014296 150 WKSVYCKPERDAFLGVSPTTLLQFLVQRKRWSEGDFQI 187 (427)
Q Consensus 150 Wrs~y~~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi 187 (427)
||..|+ |+..| .-.+|+++..+++||+||..|++--
T Consensus 342 ~k~~y~-~~A~a-~T~aP~t~~vflsQRRRWinSTi~N 377 (527)
T PF03142_consen 342 YKTEYV-PSAVA-YTDAPETFSVFLSQRRRWINSTIHN 377 (527)
T ss_pred ceEEEc-ccccc-cccCCccHHHHHHHhhhccchhHhh
Confidence 999999 55556 6899999999999999999999854
No 40
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=97.63 E-value=0.00027 Score=78.55 Aligned_cols=138 Identities=20% Similarity=0.214 Sum_probs=87.7
Q ss_pred CChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCccchH-hH--HHHhhhhhcccccccCCceec--cccceeehhh
Q 014296 4 NNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYS-NS--LRIYNEVEFEGMDGYGGPIYC--GSGCFHRREI 77 (427)
Q Consensus 4 n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~d~~~-~~--~~~f~~~~~~g~dg~~g~~~~--GTg~~~RR~a 77 (427)
.+|+++.|.+--|. || +||-+.. +-.|.-..-.-. +. +.+- ...++.-+..=|-+.| |.=+.+|-+|
T Consensus 453 ~~P~ai~~lv~~f~~dp----~VggaCG--~I~~~~~~w~v~~Q~FEY~Is-h~l~Ka~ESvFG~VsclPGcfs~yR~~a 525 (862)
T KOG2571|consen 453 LDPDALYHLVKVFDEDP----QVGGACG--RILNKGGSWVVAYQNFEYAIS-HNLQKATESVFGCVSCLPGCFSLYRASA 525 (862)
T ss_pred cCcHHHHHHHHHhccCc----ccceecc--ccccCCCceEEeHHHHHHHHH-HHHHHhhhhhceeEEecCchhHHHHHHH
Confidence 57999999999886 88 6777755 233322222111 11 1122 2344444554454544 5555699999
Q ss_pred hcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 78 LCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 78 L~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
|.+-.. +.+- | +.-++. +-|..+. ..||=....++..+||+..||..
T Consensus 526 L~~~~~-----~~~y---~--------~~~~~~----------------~~~~~~~-~geDR~L~~~llskgy~l~Y~a~ 572 (862)
T KOG2571|consen 526 LMDQFV-----EYFY---G--------EKFSGP----------------RHGIQYS-LGEDRWLCTLLLSKGYRLKYVAA 572 (862)
T ss_pred HhcchH-----Hhhh---c--------hhhcCc----------------ccccccc-cchhHHHHHHHHhccceeeeecc
Confidence 977211 1010 0 000011 1144444 89999999999999999999944
Q ss_pred CccccccCCCcCHHHHHHHHHHHhhh
Q 014296 158 ERDAFLGVSPTTLLQFLVQRKRWSEG 183 (427)
Q Consensus 158 ~~~af~G~aP~~l~~~l~Qr~RWa~G 183 (427)
..| .-.+|+++.+++.||+||..|
T Consensus 573 -s~a-~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 573 -SDA-ETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred -ccc-cccCcHhHHHHHHHhhhhccc
Confidence 455 799999999999999999999
No 41
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=97.39 E-value=0.00011 Score=66.90 Aligned_cols=73 Identities=18% Similarity=0.178 Sum_probs=51.3
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccc---hHhHHHHhhhhhcccccccCCce-eccccceeehhhh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNEL---YSNSLRIYNEVEFEGMDGYGGPI-YCGSGCFHRREIL 78 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~---~~~~~~~f~~~~~~g~dg~~g~~-~~GTg~~~RR~aL 78 (427)
..+|+++++.+..|.+. ...||......+.+.+.. +.-+...++.....++..+++.. +.|+|+++||+++
T Consensus 93 ~~~p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 93 LVDPNALEELNARFAAG-----ARVVQAYYNSKNPDDSWITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred CCChhHHHHHHHHHhhC-----CCeeEEEEeeeCCccCHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 45799999999998653 346888777766544322 22233445556666777777664 6899999999999
Q ss_pred cC
Q 014296 79 CG 80 (427)
Q Consensus 79 ~~ 80 (427)
++
T Consensus 168 ~~ 169 (183)
T cd06438 168 RQ 169 (183)
T ss_pred Hh
Confidence 86
No 42
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=96.58 E-value=0.0028 Score=57.88 Aligned_cols=98 Identities=9% Similarity=0.019 Sum_probs=62.8
Q ss_pred cCChhHHHHHhhhh-cCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcCC
Q 014296 3 SNNSQAVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGR 81 (427)
Q Consensus 3 ~n~p~~l~~~l~~f-~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~~ 81 (427)
..+|+++.+.+-.+ .+| +++.|+.+......+.. ... ..+..... .+......+.|.++++||+++..+
T Consensus 95 ~~~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~i 164 (202)
T cd04184 95 ELAPHALYEVVKALNEHP----DADLIYSDEDKIDEGGK-RSE----PFFKPDWS-PDLLLSQNYIGHLLVYRRSLVRQV 164 (202)
T ss_pred cCChHHHHHHHHHHHhCC----CCCEEEccHHhccCCCC-Eec----cccCCCCC-HHHhhhcCCccceEeEEHHHHHHh
Confidence 35799999999988 567 68888776654432211 000 00000000 111122235677788999999883
Q ss_pred CCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCC-CCCchHHHHHHHHhCCcEEEEec
Q 014296 82 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCK 156 (427)
Q Consensus 82 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~-svtED~~tg~~lh~~GWrs~y~~ 156 (427)
| ||+.+ ...||.+.++|++.+||+.+|+.
T Consensus 165 --------------g--------------------------------gf~~~~~~~eD~~l~~rl~~~g~~~~~~~ 194 (202)
T cd04184 165 --------------G--------------------------------GFREGFEGAQDYDLVLRVSEHTDRIAHIP 194 (202)
T ss_pred --------------C--------------------------------CCCcCcccchhHHHHHHHHhccceEEEcc
Confidence 4 66554 25799999999999999999993
No 43
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=96.26 E-value=0.0051 Score=56.16 Aligned_cols=96 Identities=13% Similarity=-0.010 Sum_probs=65.6
Q ss_pred CChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCccchHh----HHHHhhhhhcccccccCCceeccccceeehhhh
Q 014296 4 NNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSN----SLRIYNEVEFEGMDGYGGPIYCGSGCFHRREIL 78 (427)
Q Consensus 4 n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~----~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL 78 (427)
.+|+++.+.+..+. +| +++.|..+....+.+....... ......+... ....++|.+.++||+++
T Consensus 93 ~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~rr~~~ 162 (201)
T cd04195 93 SLPDRFEKQLDFIEKNP----EIDIVGGGVLEFDSDGNDIGKRRLPTSHDDILKFAR------RRSPFNHPTVMFRKSKV 162 (201)
T ss_pred cCcHHHHHHHHHHHhCC----CeEEEcccEEEECCCCCeeccccCCCCHHHHHHHhc------cCCCCCChHHhhhHHHH
Confidence 57999999999986 55 7889988776654443222111 0111111111 11224566789999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEe
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYC 155 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~ 155 (427)
..+ | ||......||.+..+++..+|++..|+
T Consensus 163 ~~~--------------g--------------------------------~~~~~~~~eD~~~~~r~~~~g~~~~~~ 193 (201)
T cd04195 163 LAV--------------G--------------------------------GYQDLPLVEDYALWARMLANGARFANL 193 (201)
T ss_pred HHc--------------C--------------------------------CcCCCCCchHHHHHHHHHHcCCceecc
Confidence 873 4 777668899999999999999999998
No 44
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.00 E-value=0.011 Score=53.12 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=61.8
Q ss_pred ChhHHHHHhhhh-cCCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcCCCC
Q 014296 5 NSQAVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRKY 83 (427)
Q Consensus 5 ~p~~l~~~l~~f-~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~~~~ 83 (427)
.|+.+.+.+..+ .++ +..+|..+..+.+.+........ .......+.......+|++.++||+++.++
T Consensus 89 ~~~~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (202)
T cd06433 89 LPGALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVIGRRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEKY-- 157 (202)
T ss_pred CchHHHHHHHHHHhCC----CccEEEeeeEEEcCCCCcccCCC-----CcchhhhHHhhcCcccCcceEEEHHHHHHh--
Confidence 467788887443 466 67788777665544432211110 111111222334456788899999999884
Q ss_pred CchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCC-CCCchHHHHHHHHhCCcEEEEec
Q 014296 84 DKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCK 156 (427)
Q Consensus 84 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~-svtED~~tg~~lh~~GWrs~y~~ 156 (427)
| ||... ...||.+..+|+..+|++.++++
T Consensus 158 ------------~--------------------------------~f~~~~~~~~D~~~~~r~~~~g~~~~~~~ 187 (202)
T cd06433 158 ------------G--------------------------------GFDESYRIAADYDLLLRLLLAGKIFKYLP 187 (202)
T ss_pred ------------C--------------------------------CCchhhCchhhHHHHHHHHHcCCceEecc
Confidence 3 45433 46799999999999999999883
No 45
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=95.98 E-value=0.031 Score=51.65 Aligned_cols=26 Identities=19% Similarity=0.128 Sum_probs=23.7
Q ss_pred cccCCCCCchHHHHHHHHhCCcEEEE
Q 014296 129 GLKYGCPVEDVITGISIQCQGWKSVY 154 (427)
Q Consensus 129 G~~y~svtED~~tg~~lh~~GWrs~y 154 (427)
||+.....||++.+.|+..+|++..+
T Consensus 153 ~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 153 GFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred CCCccccccHHHHHHHHHhCCCEEEc
Confidence 78877799999999999999999876
No 46
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=95.89 E-value=0.011 Score=55.44 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=39.0
Q ss_pred ceeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCC--CchHHH
Q 014296 64 PIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP--VEDVIT 141 (427)
Q Consensus 64 ~~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~sv--tED~~t 141 (427)
....|+|+++||++++.+ | ||+.... .||++.
T Consensus 149 ~~~~~~~~~~rr~~~~~~--------------g--------------------------------gfd~~~~~~~eD~d~ 182 (237)
T cd02526 149 DFLITSGSLISLEALEKV--------------G--------------------------------GFDEDLFIDYVDTEW 182 (237)
T ss_pred eeeeccceEEcHHHHHHh--------------C--------------------------------CCCHHHcCccchHHH
Confidence 345789999999999984 4 5654432 489999
Q ss_pred HHHHHhCCcEEEEecCCc
Q 014296 142 GISIQCQGWKSVYCKPER 159 (427)
Q Consensus 142 g~~lh~~GWrs~y~~p~~ 159 (427)
++|+..+||+..|+ |+.
T Consensus 183 ~~r~~~~G~~~~~~-~~~ 199 (237)
T cd02526 183 CLRARSKGYKIYVV-PDA 199 (237)
T ss_pred HHHHHHcCCcEEEE-cCe
Confidence 99999999999999 543
No 47
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=95.38 E-value=0.028 Score=48.92 Aligned_cols=45 Identities=22% Similarity=0.309 Sum_probs=37.5
Q ss_pred eccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCC--CCchHHHHH
Q 014296 66 YCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGC--PVEDVITGI 143 (427)
Q Consensus 66 ~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~s--vtED~~tg~ 143 (427)
.+|++.++||+++... | ||+... .-||.+..+
T Consensus 112 ~~~~~~~~~~~~~~~~--------------~--------------------------------~~~~~~~~~~eD~~~~~ 145 (166)
T cd04186 112 VSGAFLLVRREVFEEV--------------G--------------------------------GFDEDFFLYYEDVDLCL 145 (166)
T ss_pred CceeeEeeeHHHHHHc--------------C--------------------------------CCChhhhccccHHHHHH
Confidence 7899999999999873 3 565443 559999999
Q ss_pred HHHhCCcEEEEec
Q 014296 144 SIQCQGWKSVYCK 156 (427)
Q Consensus 144 ~lh~~GWrs~y~~ 156 (427)
+++.+||+..++.
T Consensus 146 ~~~~~g~~i~~~~ 158 (166)
T cd04186 146 RARLAGYRVLYVP 158 (166)
T ss_pred HHHHcCCeEEEcc
Confidence 9999999999983
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=95.02 E-value=0.063 Score=47.95 Aligned_cols=31 Identities=19% Similarity=-0.031 Sum_probs=23.1
Q ss_pred cccCCC---CCchHHHHHHHHhCCcEEEEecCCc
Q 014296 129 GLKYGC---PVEDVITGISIQCQGWKSVYCKPER 159 (427)
Q Consensus 129 G~~y~s---vtED~~tg~~lh~~GWrs~y~~p~~ 159 (427)
||...- -.||++.++|+..+|++..++.++.
T Consensus 143 gf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~ 176 (182)
T cd06420 143 GFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAA 176 (182)
T ss_pred CCCcccccCCcchHHHHHHHHHcCCcEEEecccc
Confidence 665432 2699999999999997777775533
No 49
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=94.41 E-value=0.089 Score=51.24 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=60.3
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhH--HHHhhhhh-cccccc-cCCceeccccceeehhhhc
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNS--LRIYNEVE-FEGMDG-YGGPIYCGSGCFHRREILC 79 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~--~~~f~~~~-~~g~dg-~~g~~~~GTg~~~RR~aL~ 79 (427)
++|+.+.+.+..+.++ +.+++.|. |..++ .+++..++.. ........ ....+. ....+..++|+++||++++
T Consensus 86 ~~~~~l~~l~~~~~~~--~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~ 161 (281)
T TIGR01556 86 PGNAFLAAQWKLLSAE--NGQACALG-PRFFD-RGTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQ 161 (281)
T ss_pred CCHHHHHHHHHHHHhc--CCceEEEC-CeEEc-CCCcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHH
Confidence 4688999988887542 12688885 44333 2222222110 00000000 001111 1223457889999999998
Q ss_pred CCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCC--CCchHHHHHHHHhCCcEEEEecC
Q 014296 80 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGC--PVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~s--vtED~~tg~~lh~~GWrs~y~~p 157 (427)
.+ | |++..- =.||++..+|+..+||+..++ |
T Consensus 162 ~i--------------G--------------------------------~fde~~fi~~~D~e~~~R~~~~G~~i~~~-~ 194 (281)
T TIGR01556 162 RL--------------G--------------------------------MMDEELFIDHVDTEWSLRAQNYGIPLYID-P 194 (281)
T ss_pred Hh--------------C--------------------------------CccHhhcccchHHHHHHHHHHCCCEEEEe-C
Confidence 84 3 333321 248999999999999999999 5
Q ss_pred C
Q 014296 158 E 158 (427)
Q Consensus 158 ~ 158 (427)
+
T Consensus 195 ~ 195 (281)
T TIGR01556 195 D 195 (281)
T ss_pred C
Confidence 4
No 50
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=94.35 E-value=0.15 Score=50.33 Aligned_cols=50 Identities=18% Similarity=0.119 Sum_probs=39.8
Q ss_pred CCceeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCC---Cch
Q 014296 62 GGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VED 138 (427)
Q Consensus 62 ~g~~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~sv---tED 138 (427)
..+...|.+.++||+++.++ | ||+.+-. .||
T Consensus 167 ~~~~~~g~~~~irr~~~~~v--------------G--------------------------------gfDe~~~~~~~ED 200 (299)
T cd02510 167 RSPTMAGGLFAIDREWFLEL--------------G--------------------------------GYDEGMDIWGGEN 200 (299)
T ss_pred cCccccceeeEEEHHHHHHh--------------C--------------------------------CCCCcccccCchh
Confidence 34456788888999999984 5 6765543 499
Q ss_pred HHHHHHHHhCCcEEEEecCC
Q 014296 139 VITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 139 ~~tg~~lh~~GWrs~y~~p~ 158 (427)
++.++|+..+||+.+|+ |+
T Consensus 201 ~Dl~~R~~~~G~~i~~~-p~ 219 (299)
T cd02510 201 LELSFKVWQCGGSIEIV-PC 219 (299)
T ss_pred HHHHHHHHHcCCeEEEe-ec
Confidence 99999999999999998 53
No 51
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=93.40 E-value=0.12 Score=51.40 Aligned_cols=111 Identities=14% Similarity=0.068 Sum_probs=66.7
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCc-cchHhHHH---------Hhhhhhc--ccccccCCceeccccc
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKN-ELYSNSLR---------IYNEVEF--EGMDGYGGPIYCGSGC 71 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~-d~~~~~~~---------~f~~~~~--~g~dg~~g~~~~GTg~ 71 (427)
.+|+++.+.+-.+.+.+ +.+.|+.-...++.... +..+.... ..++... ...+...+ ..+|.++
T Consensus 97 ~~~~~l~~ll~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~ 172 (305)
T COG1216 97 VEPDLLEELLKAAEEDP---AAGVVGPLIRNYDESLYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVA-SLSGACL 172 (305)
T ss_pred eChhHHHHHHHHHHhCC---CCeEeeeeEecCCCCcchheeccccccccccceecccccccccccchhhhhh-hcceeee
Confidence 46889999988877432 78888776655432211 11110000 0000000 00011111 4789999
Q ss_pred eeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhccccccccccccccccccccc--CCCCCchHHHHHHHHhCC
Q 014296 72 FHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLK--YGCPVEDVITGISIQCQG 149 (427)
Q Consensus 72 ~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~--y~svtED~~tg~~lh~~G 149 (427)
++||++++.+ | |++ +-.-.||++.++|+...|
T Consensus 173 li~~~~~~~v--------------G--------------------------------~~de~~F~y~eD~D~~~R~~~~G 206 (305)
T COG1216 173 LIRREAFEKV--------------G--------------------------------GFDERFFIYYEDVDLCLRARKAG 206 (305)
T ss_pred EEcHHHHHHh--------------C--------------------------------CCCcccceeehHHHHHHHHHHcC
Confidence 9999999984 4 443 334589999999999999
Q ss_pred cEEEEecCCccccccC
Q 014296 150 WKSVYCKPERDAFLGV 165 (427)
Q Consensus 150 Wrs~y~~p~~~af~G~ 165 (427)
|+..|+ |....++-.
T Consensus 207 ~~i~~~-p~a~i~H~~ 221 (305)
T COG1216 207 YKIYYV-PDAIIYHKI 221 (305)
T ss_pred CeEEEe-eccEEEEec
Confidence 999999 655554433
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=92.56 E-value=0.28 Score=44.78 Aligned_cols=22 Identities=14% Similarity=-0.034 Sum_probs=19.2
Q ss_pred CCchHHHHHHHHhCCcEEEEecC
Q 014296 135 PVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 135 vtED~~tg~~lh~~GWrs~y~~p 157 (427)
..||.+.+.++..+|++. |+..
T Consensus 146 ~~eD~~~~~r~~~~G~~i-~~~~ 167 (202)
T cd04185 146 WGDDTEYTLRASKAGPGI-YVPD 167 (202)
T ss_pred cchHHHHHHHHHHcCCcE-Eecc
Confidence 459999999999999999 8843
No 53
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=90.75 E-value=0.16 Score=43.60 Aligned_cols=74 Identities=22% Similarity=0.168 Sum_probs=40.4
Q ss_pred CChhHHHHHh-hhhcCCCCCCeEEEEecCCccccCCCccchHh---HHHHhhhhhcccccccCC-ceeccccceeehhhh
Q 014296 4 NNSQAVRDAL-CFFMDEEKGHEFAFVQFPQNFDNVTKNELYSN---SLRIYNEVEFEGMDGYGG-PIYCGSGCFHRREIL 78 (427)
Q Consensus 4 n~p~~l~~~l-~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~---~~~~f~~~~~~g~dg~~g-~~~~GTg~~~RR~aL 78 (427)
..|+.+.+.+ .+..++ +++.|.......+.+.+-.... ...........+...... ..+.|++.++||+++
T Consensus 91 ~~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 166 (180)
T cd06423 91 LEPDALKRLVVPFFADP----KVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166 (180)
T ss_pred cChHHHHHHHHHhccCC----CeeeEeeeEEEecCcCcceeccchheecceeeeeeehhheecceeecCchHHHHHHHHH
Confidence 3688899884 444466 6788876655544432111111 111111222222222222 456899999999999
Q ss_pred cCC
Q 014296 79 CGR 81 (427)
Q Consensus 79 ~~~ 81 (427)
+.+
T Consensus 167 ~~~ 169 (180)
T cd06423 167 REV 169 (180)
T ss_pred HHh
Confidence 983
No 54
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=90.34 E-value=0.2 Score=51.22 Aligned_cols=124 Identities=23% Similarity=0.285 Sum_probs=81.2
Q ss_pred ChhHHHHHhhhhcCCCCCCeEEEE-ecCCccccCCCccchHhHHHHhhhhhccc----ccccCCceeccccceeehhhhc
Q 014296 5 NSQAVRDALCFFMDEEKGHEFAFV-QFPQNFDNVTKNELYSNSLRIYNEVEFEG----MDGYGGPIYCGSGCFHRREILC 79 (427)
Q Consensus 5 ~p~~l~~~l~~f~Dp~~~~~vafV-Q~PQ~F~n~~~~d~~~~~~~~f~~~~~~g----~dg~~g~~~~GTg~~~RR~aL~ 79 (427)
.||.+.+..-=++.++ |+|+| |+|-.++ .+..|.. -++ ++|...++- -|-++--...|-.|+.|++||+
T Consensus 184 ~pdtildm~t~M~she---kmalvtq~py~~d-r~Gf~at-le~-~~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~ld 257 (431)
T KOG2547|consen 184 KPDTILDMATTMMSHE---KMALVTQTPYCKD-RQGFDAT-LEQ-VYFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEALD 257 (431)
T ss_pred cCchHHHHHHhhhccc---ceeeecCCceeec-cccchhh-hhh-eeeccCCceEEEccccccccccccHHHHHHHHHHH
Confidence 4677777777777776 89999 5664433 3332221 121 455433321 1223333457888999999998
Q ss_pred CCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccc--cCCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 80 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGL--KYGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~--~y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
+- | |. -.+.+.||+..+=.+..+||++.+.+-
T Consensus 258 ~~--------------g--------------------------------gi~~f~~yLaedyFaaksllSRG~ksaist~ 291 (431)
T KOG2547|consen 258 EC--------------G--------------------------------GISAFGGYLAEDYFAAKSLLSRGWKSAISTH 291 (431)
T ss_pred Hh--------------c--------------------------------cHHHHHHHHHHHHHHHHHHHhhhhhhhhccc
Confidence 73 2 22 113489999999999999999999864
Q ss_pred CccccccCCCcCHHHHHHHHHHHhh
Q 014296 158 ERDAFLGVSPTTLLQFLVQRKRWSE 182 (427)
Q Consensus 158 ~~~af~G~aP~~l~~~l~Qr~RWa~ 182 (427)
+|-.-.|-.+...+..|-.||..
T Consensus 292 --palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 292 --PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred --chhhhhhhhHHHHHHHHHHHhhh
Confidence 33245666788888888889963
No 55
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=89.77 E-value=0.9 Score=43.22 Aligned_cols=105 Identities=11% Similarity=-0.054 Sum_probs=58.6
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCC--c-cchHhHHHHhhhhhcccccccCCceeccccceeehhhhc
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTK--N-ELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILC 79 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~--~-d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~ 79 (427)
..+|+++.+.+-.+.++ +...|..+ ++.+... . ..........+.....-..+.+..-..|...++||++++
T Consensus 105 ~~~~~~l~~l~~~~~~~----~~~~v~g~-r~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~ 179 (243)
T PLN02726 105 SHHPKYLPSFIKKQRET----GADIVTGT-RYVKGGGVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALE 179 (243)
T ss_pred CCCHHHHHHHHHHHHhc----CCcEEEEc-cccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHH
Confidence 35899999999887765 46667654 3332211 1 111111111111111111112223345666689999998
Q ss_pred CCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEecCC
Q 014296 80 GRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~~p~ 158 (427)
.+.. ....+...+|++..+++..+|||.+++ |.
T Consensus 180 ~i~~---------------------------------------------~~~~~~~~~~~el~~~~~~~g~~i~~v-p~ 212 (243)
T PLN02726 180 DLVS---------------------------------------------SVVSKGYVFQMEIIVRASRKGYRIEEV-PI 212 (243)
T ss_pred HHHh---------------------------------------------hccCCCcEEehHHHHHHHHcCCcEEEe-Cc
Confidence 7410 012223456899999999999999998 53
No 56
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=89.00 E-value=1.1 Score=41.39 Aligned_cols=100 Identities=10% Similarity=-0.120 Sum_probs=56.8
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCC-Cccch----HhHHHHhhhhhcccccccCCceeccccceeehhhh
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVT-KNELY----SNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREIL 78 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~-~~d~~----~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL 78 (427)
.+|+.+.+.+..+.++ +...|..+......+ ++... ......++.... ...+.....|+..++||+++
T Consensus 91 ~~~~~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~~ 163 (224)
T cd06442 91 HPPEYIPELLEAQLEG----GADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLL---LGRKVSDPTSGFRAYRREVL 163 (224)
T ss_pred CCHHHHHHHHHHHhcC----CCCEEEEeeeecCCccCCCcHHHHHHHHHHHHHHHHH---cCCCCCCCCCccchhhHHHH
Confidence 5799999999987766 455565553322211 11111 111111111111 12233345666668999999
Q ss_pred cCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEe
Q 014296 79 CGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYC 155 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~ 155 (427)
+.++ + ++......+|.+..+++...||+..+.
T Consensus 164 ~~ig--------------~-------------------------------~~~~~~~~~~~~l~~~~~~~g~~i~~~ 195 (224)
T cd06442 164 EKLI--------------D-------------------------------SLVSKGYKFQLELLVRARRLGYRIVEV 195 (224)
T ss_pred HHHh--------------h-------------------------------hccCCCcEEeHHHHHHHHHcCCeEEEe
Confidence 8741 0 222233456778899999999999998
No 57
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=88.80 E-value=1.1 Score=41.54 Aligned_cols=29 Identities=14% Similarity=-0.033 Sum_probs=23.5
Q ss_pred cccCC--CCCchHHHHHHHHhCCcEEEEecC
Q 014296 129 GLKYG--CPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 129 G~~y~--svtED~~tg~~lh~~GWrs~y~~p 157 (427)
||... ...||++..+|+..+|++..|++.
T Consensus 173 ~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~ 203 (219)
T cd06913 173 PFDEGGKGVPEDLLFFYEHLRKGGGVYRVDR 203 (219)
T ss_pred CccchhccchhHHHHHHHHHHcCCceEEEcc
Confidence 66543 345999999999999999999954
No 58
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=88.70 E-value=1.1 Score=44.14 Aligned_cols=107 Identities=14% Similarity=0.122 Sum_probs=64.2
Q ss_pred cCChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHhHH-----HHhhhhhcc-cccccCCceeccccceeehh
Q 014296 3 SNNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSNSL-----RIYNEVEFE-GMDGYGGPIYCGSGCFHRRE 76 (427)
Q Consensus 3 ~n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~-----~~f~~~~~~-g~dg~~g~~~~GTg~~~RR~ 76 (427)
+.+|+++.+.+-+..+=+ ...-+++-.|..|.+.+.+..+-++. ..+.+.... ..+.++.....|++.++||+
T Consensus 100 i~~~~~i~~~~~~~~~l~-~~~~~~~~~p~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~ 178 (281)
T PF10111_consen 100 IPSPDFIEKLLNHVKKLD-KNPNAFLVYPCLYLSEEGSEKFYSQFKNLWDHEFLESFISGKNSLWEFIAFASSCFLINRE 178 (281)
T ss_pred eeCHHHHHHHHHHHHHHh-cCCCceEEEeeeeccchhhHHHhhcchhcchHHHHHHHhhccccccccccccceEEEEEHH
Confidence 357899999988322110 01346666777777655443332221 111111112 22333334457788999999
Q ss_pred hhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCC---CCchHHHHHHHHhCCcEEE
Q 014296 77 ILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGC---PVEDVITGISIQCQGWKSV 153 (427)
Q Consensus 77 aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~s---vtED~~tg~~lh~~GWrs~ 153 (427)
....+ | ||++.= =.||.+.+.||...|.+..
T Consensus 179 ~f~~i--------------G--------------------------------GfDE~f~G~G~ED~D~~~RL~~~~~~~~ 212 (281)
T PF10111_consen 179 DFLEI--------------G--------------------------------GFDERFRGWGYEDIDFGYRLKKAGYKFK 212 (281)
T ss_pred HHHHh--------------C--------------------------------CCCccccCCCcchHHHHHHHHHcCCcEe
Confidence 99884 5 554332 2599999999999999988
Q ss_pred Eec
Q 014296 154 YCK 156 (427)
Q Consensus 154 y~~ 156 (427)
++.
T Consensus 213 ~~~ 215 (281)
T PF10111_consen 213 RSP 215 (281)
T ss_pred cCh
Confidence 873
No 59
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=88.53 E-value=0.84 Score=41.50 Aligned_cols=102 Identities=13% Similarity=-0.040 Sum_probs=62.0
Q ss_pred CChhHHHHHhhhh-cCCCCCCeEEEEecCCccccCCCccchHhHHH--HhhhhhcccccccCCceeccccceeehhhhcC
Q 014296 4 NNSQAVRDALCFF-MDEEKGHEFAFVQFPQNFDNVTKNELYSNSLR--IYNEVEFEGMDGYGGPIYCGSGCFHRREILCG 80 (427)
Q Consensus 4 n~p~~l~~~l~~f-~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~--~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~ 80 (427)
..|+.+.+.+-.+ .+| +.+.+..+....+.+.... ..... ..+......+.-.......|+++++||+++..
T Consensus 92 ~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 166 (214)
T cd04196 92 WLPDKLERLLKAFLKDD----KPLLVYSDLELVDENGNPI-GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLEL 166 (214)
T ss_pred cChhHHHHHHHHHhcCC----CceEEecCcEEECCCCCCc-ccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHh
Confidence 4688899999884 455 6788888766544332211 00000 00000011122223345679999999999988
Q ss_pred CCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCC-CCCchHHHHHHHHhCCcEEEEecC
Q 014296 81 RKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~-svtED~~tg~~lh~~GWrs~y~~p 157 (427)
+ + ++... ...||.....++.. |.+..|+++
T Consensus 167 ~--------------~--------------------------------~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 167 A--------------L--------------------------------PFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred h--------------c--------------------------------cccccccccchHHHHHHHHH-cCceEEcch
Confidence 4 2 45444 67899999998877 668888854
No 60
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=73.87 E-value=4.8 Score=33.26 Aligned_cols=18 Identities=17% Similarity=-0.066 Sum_probs=16.0
Q ss_pred CchHHHHHHHHhCCcEEE
Q 014296 136 VEDVITGISIQCQGWKSV 153 (427)
Q Consensus 136 tED~~tg~~lh~~GWrs~ 153 (427)
.||..+..+++..|++..
T Consensus 138 ~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 138 EEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred cchHHHHHHHHhhccccc
Confidence 799999999999998764
No 61
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=68.71 E-value=12 Score=34.37 Aligned_cols=21 Identities=19% Similarity=0.083 Sum_probs=19.0
Q ss_pred CchHHHHHHHHhCCcEEEEecC
Q 014296 136 VEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 136 tED~~tg~~lh~~GWrs~y~~p 157 (427)
.+|++..+++...||+..++ |
T Consensus 181 ~~d~el~~r~~~~g~~~~~v-p 201 (211)
T cd04188 181 AFDVELLVLARRLGYPIEEV-P 201 (211)
T ss_pred EeeHHHHHHHHHcCCeEEEc-C
Confidence 46999999999999999988 5
No 62
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=65.57 E-value=1.6 Score=37.32 Aligned_cols=75 Identities=8% Similarity=0.045 Sum_probs=43.8
Q ss_pred ChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCCccchHh--HHHHhhhhhcccccccCCceeccccceeehhhhcCC
Q 014296 5 NSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTKNELYSN--SLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGR 81 (427)
Q Consensus 5 ~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~--~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~~ 81 (427)
.|+++.+.+.++.+++ ..+.....+....+......... .....+............+.++|+++++||++++++
T Consensus 92 ~~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ 168 (169)
T PF00535_consen 92 SPDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEEI 168 (169)
T ss_dssp -TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred cHHHHHHHHHHHHhCC--CcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence 5679999999998742 24444443333332222111110 112333444455566677889999999999999863
No 63
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=49.84 E-value=17 Score=29.00 Aligned_cols=19 Identities=26% Similarity=-0.010 Sum_probs=14.0
Q ss_pred chHHHHHHHHhCCcEEEEe
Q 014296 137 EDVITGISIQCQGWKSVYC 155 (427)
Q Consensus 137 ED~~tg~~lh~~GWrs~y~ 155 (427)
||.+.+.|+...|-+....
T Consensus 47 ED~Dl~~Rl~~~g~~~~~~ 65 (78)
T PF02709_consen 47 EDDDLYNRLWKAGLKIVRV 65 (78)
T ss_dssp HHHHHHHHHHHTT---B-S
T ss_pred cHHHHHHHHHHcCCeEEec
Confidence 8999999999999987665
No 64
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=46.87 E-value=14 Score=32.59 Aligned_cols=74 Identities=11% Similarity=-0.081 Sum_probs=39.6
Q ss_pred CChhHHHHHhhhhcCCCCCCeEEEEecCCccccCCC-ccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcCC
Q 014296 4 NNSQAVRDALCFFMDEEKGHEFAFVQFPQNFDNVTK-NELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGR 81 (427)
Q Consensus 4 n~p~~l~~~l~~f~Dp~~~~~vafVQ~PQ~F~n~~~-~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~~ 81 (427)
.+|+.|.+.+..+.++ +..+|+.|....+... ...+.......+........+.......|...++||++++++
T Consensus 92 ~~~~~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 166 (185)
T cd04179 92 HPPEDIPKLLEKLLEG----GADVVIGSRFVRGGGAGMPLLRRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEAL 166 (185)
T ss_pred CCHHHHHHHHHHHhcc----CCcEEEEEeecCCCcccchHHHHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHH
Confidence 5789999999886655 4677777765554321 111111111111111111122223334555668999999984
No 65
>PF15050 SCIMP: SCIMP protein
Probab=46.00 E-value=25 Score=30.55 Aligned_cols=51 Identities=18% Similarity=0.490 Sum_probs=28.8
Q ss_pred cccchhhhHHHHHHHHHHHH-----HHHHHHHHhCCCCCCeeeCc--CCCccchhhhhh
Q 014296 276 GWWNEQRLWLYLRTTSFLFA-----FIDAILKTLGFSESSFVVTE--KVADEDVSQRYE 327 (427)
Q Consensus 276 ~ww~~qr~w~i~~~s~~l~a-----~~~~llk~lg~~~~~F~VT~--K~~~~~~~~~y~ 327 (427)
+||++ .||.|.+++.-+.. ++--+.+.+-.....++++. |....+..+-|+
T Consensus 2 ~WWr~-nFWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp~k~~~rdeEkmYE 59 (133)
T PF15050_consen 2 SWWRD-NFWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKPLKQKQRDEEKMYE 59 (133)
T ss_pred chHHh-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccchhhhcccHHHHHH
Confidence 58985 78988775433221 23334455555677898874 333333345564
No 66
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=43.36 E-value=45 Score=35.82 Aligned_cols=33 Identities=24% Similarity=0.529 Sum_probs=22.2
Q ss_pred HhhcccCCCCCChhHHHHHHHHHHHHHHHhhhc
Q 014296 394 GLFLRKDNGKMPSSVTTKSLVLALSVCTCFTFL 426 (427)
Q Consensus 394 gl~~r~~k~~~P~~~~~~s~~l~~~~~~~~~~~ 426 (427)
+||.|+.+..+|.+-...+.+++++|..+.+||
T Consensus 150 Alf~R~~~a~lPRif~fRa~ll~Lvfl~~~syW 182 (505)
T PF06638_consen 150 ALFFRRPRADLPRIFVFRALLLVLVFLFLFSYW 182 (505)
T ss_pred HHhcCcccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 345577777777777777777777666666664
No 67
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=42.93 E-value=56 Score=34.03 Aligned_cols=39 Identities=31% Similarity=0.209 Sum_probs=21.7
Q ss_pred HHHHHHHHHHH--HHhhcccCCCCCChhHHHHHHHHHHHHHH
Q 014296 382 SALVLINWPLY--QGLFLRKDNGKMPSSVTTKSLVLALSVCT 421 (427)
Q Consensus 382 ~~~v~~~~p~~--~gl~~r~~k~~~P~~~~~~s~~l~~~~~~ 421 (427)
.+.+.-.|-|| +-|.+|-+.++ -..-.-.|.+-|++|.+
T Consensus 199 ~~~~fayWLFYiVri~~~r~~nYk-~iV~yatslvDaLLfiH 239 (531)
T KOG3814|consen 199 FLIVFAYWLFYIVRILDERYRNYK-GIVQYATSLVDALLFIH 239 (531)
T ss_pred HHHHHHHHHHHhhhhhcccchhhH-HHHHHHHHHHHHHHHHH
Confidence 34444456666 45666666553 12222346777777776
No 68
>PRK10063 putative glycosyl transferase; Provisional
Probab=42.73 E-value=53 Score=31.61 Aligned_cols=32 Identities=6% Similarity=-0.115 Sum_probs=24.6
Q ss_pred cccCC-CCCchHHHHHHHHhCCcEEEEecCCccc
Q 014296 129 GLKYG-CPVEDVITGISIQCQGWKSVYCKPERDA 161 (427)
Q Consensus 129 G~~y~-svtED~~tg~~lh~~GWrs~y~~p~~~a 161 (427)
||+.. ...||++..+|+..+|.+..++ |.+.+
T Consensus 161 ~fd~~~~~~~Dydl~lrl~~~g~~~~~v-~~~l~ 193 (248)
T PRK10063 161 RYDLQYKVSSDYALAARLYKAGYAFKKL-NGLVS 193 (248)
T ss_pred CCCcccchHHhHHHHHHHHHcCCcEEEc-CceeE
Confidence 56433 3579999999999999999998 44444
No 69
>PRK10073 putative glycosyl transferase; Provisional
Probab=42.26 E-value=21 Score=36.02 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=24.4
Q ss_pred cccCCCCCchHHHHHHHHhCCcEEEEecC
Q 014296 129 GLKYGCPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 129 G~~y~svtED~~tg~~lh~~GWrs~y~~p 157 (427)
.|..+...||+...+++..++-|..|+++
T Consensus 182 ~f~~~~~~eD~~~~~~~~~~~~~v~~~~~ 210 (328)
T PRK10073 182 KFEPGLHHQDIPWTTEVMFNALRVRYTEQ 210 (328)
T ss_pred ccCCCCEeccHHHHHHHHHHCCEEEEECC
Confidence 46666667999999999999999999955
No 70
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]
Probab=36.38 E-value=2.3e+02 Score=29.09 Aligned_cols=72 Identities=19% Similarity=0.145 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChhHHHHHHHHHHHHHH
Q 014296 345 TLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSSVTTKSLVLALSVCT 421 (427)
Q Consensus 345 ~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~~~P~~~~~~s~~l~~~~~~ 421 (427)
.+.+.=..|++.....+.. ++.+..+.++.++....+..+|.+...+..-+...+|.-.+++|+++-...=+
T Consensus 118 LlglApC~aMVivw~~La~-----Gd~~~tlv~Va~n~l~qiv~y~~~~~~~l~v~~~~v~~~~i~~Sv~lyl~iPl 189 (342)
T COG0798 118 LLGLAPCIAMVIVWSGLAK-----GDRELTLVLVAFNSLLQIVLYAPLGKFFLGVISISVPFWTIAKSVLLYLGIPL 189 (342)
T ss_pred HHHhhhhHHHHHHHHhhcc-----CcHhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHH
Confidence 3445566677776555543 35678888999999999999999999888888899999999999988775433
No 71
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=28.96 E-value=5.1e+02 Score=24.59 Aligned_cols=59 Identities=15% Similarity=0.271 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCccchh--hHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCChh
Q 014296 345 TLALLNLFCMIGAVKKVIVGDGYVKF--YETMLLQILLCSALVLINWPLYQGLFLRKDNGKMPSS 407 (427)
Q Consensus 345 ~l~~lnl~a~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~p~~~gl~~r~~k~~~P~~ 407 (427)
.++++.+++++-|+.-.+... .+. +=.+++..+..||.+...|=+.--+.+ ||++.|.-
T Consensus 101 sLl~lg~~aLlsgitaff~~n--A~~~GlItlll~a~vgGfamy~my~y~yr~~a--d~sqr~~~ 161 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKN--AQVYGLITLLLTAVVGGFAMYIMYYYAYRMRA--DNSQRPGT 161 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcC--CcchhHHHHHHHHHhhhHHHHHHHHHHHHhhc--ccccCCch
Confidence 466788888888888888652 111 122333444556666666555555543 66666643
No 72
>PHA00099 minor capsid protein
Probab=23.35 E-value=34 Score=30.09 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=28.5
Q ss_pred ccCChhHHHHHhhhhcCCCC---CCeEEEE------ecCCccccCCCccc
Q 014296 2 YSNNSQAVRDALCFFMDEEK---GHEFAFV------QFPQNFDNVTKNEL 42 (427)
Q Consensus 2 y~n~p~~l~~~l~~f~Dp~~---~~~vafV------Q~PQ~F~n~~~~d~ 42 (427)
|.|||. +.|-|+.||++ -.++|+| |.||+|.+.++.|.
T Consensus 88 F~NdP~---eml~~L~dp~NydEa~~LGl~~~~~p~~apq~~~~~~~~~~ 134 (147)
T PHA00099 88 FGNDPE---EMLDFLSDPENYDEAKALGLVYEDGPSGAPQTFFEAQPKDD 134 (147)
T ss_pred hCCCHH---HHHHHHcChhhHHHHHhcceeeecCcccccchhhhcCCCCc
Confidence 457775 45667788853 3478999 99999999988764
No 73
>PRK04987 fumarate reductase subunit C; Provisional
Probab=20.17 E-value=6.1e+02 Score=22.44 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014296 345 TLALLNLFCMIGAVKKVI 362 (427)
Q Consensus 345 ~l~~lnl~a~~~g~~~~~ 362 (427)
.++++|+++++..++...
T Consensus 68 iv~~lniiaL~a~LlHa~ 85 (130)
T PRK04987 68 IVVILNIITLAAALLHTK 85 (130)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 357899999999988765
No 74
>cd00546 QFR_TypeD_subunitC Quinol:fumarate reductase (QFR) Type D subfamily, 15kD hydrophobic subunit C; QFR couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, the opposite reaction to that catalyzed by the related protein, succinate:quinine oxidoreductase (SQR). QFRs oxidize low potential quinols such as menaquinol and are involved in anaerobic respiration with fumarate as the terminal electron acceptor. SQR and QFR share a common subunit arrangement, composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type D as they contain two transmembrane subunits (C and D) and no heme groups. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron donor (quinol). The quinone binding site resides in the transmembrane subunits.
Probab=20.08 E-value=6e+02 Score=22.31 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014296 345 TLALLNLFCMIGAVKKVI 362 (427)
Q Consensus 345 ~l~~lnl~a~~~g~~~~~ 362 (427)
.++++|+++++..++...
T Consensus 64 iv~~lniiaL~a~L~Ha~ 81 (124)
T cd00546 64 IVVLLNIIALAAALLHAK 81 (124)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 357899999999988765
Done!