Query 014296
Match_columns 427
No_of_seqs 292 out of 1279
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 09:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 1.1E-30 3.9E-35 288.9 29.9 326 4-406 251-584 (802)
2 2z86_A Chondroitin synthase; G 97.1 0.00059 2E-08 72.5 6.8 115 4-170 187-335 (625)
3 2fy7_A Beta-1,4-galactosyltran 96.8 0.00044 1.5E-08 67.2 2.4 60 129-188 191-263 (287)
4 2z86_A Chondroitin synthase; G 95.6 0.0063 2.2E-07 64.5 3.8 128 4-188 467-598 (625)
5 1xhb_A Polypeptide N-acetylgal 95.5 0.015 5.2E-07 59.4 6.2 86 62-195 200-300 (472)
6 1qg8_A Protein (spore coat pol 95.5 0.0041 1.4E-07 57.5 1.6 121 5-182 102-234 (255)
7 2d7i_A Polypeptide N-acetylgal 95.5 0.012 3.9E-07 62.3 5.2 85 63-195 281-378 (570)
8 3bcv_A Putative glycosyltransf 95.0 0.011 3.6E-07 54.0 2.8 28 129-156 189-218 (240)
9 2ffu_A Ppgalnact-2, polypeptid 93.5 0.081 2.8E-06 54.5 6.0 100 62-209 232-352 (501)
10 4fix_A UDP-galactofuranosyl tr 92.1 0.11 3.8E-06 56.0 4.8 70 64-180 363-438 (657)
11 3l7i_A Teichoic acid biosynthe 83.5 0.22 7.6E-06 53.9 0.0 29 129-157 170-199 (729)
12 3ckj_A Putative uncharacterize 81.6 2 6.9E-05 41.4 6.1 25 4-32 145-170 (329)
13 2nxv_A ATP synthase subunits r 54.7 9.7 0.00033 34.9 4.0 22 136-158 177-198 (249)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.98 E-value=1.1e-30 Score=288.85 Aligned_cols=326 Identities=20% Similarity=0.280 Sum_probs=239.2
Q ss_pred CChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCc-------cchHhHHHHhhhhhcccccccCCceeccccceeeh
Q 014296 4 NNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKN-------ELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRR 75 (427)
Q Consensus 4 n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~-------d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR 75 (427)
.+||++++.+.+|. || ++++||+|+.+.|.++. +.+.++.+.+++..+.+.+.+++++++|+++++||
T Consensus 251 ~~pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr 326 (802)
T 4hg6_A 251 PSRDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRR 326 (802)
T ss_dssp ECTTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEH
T ss_pred cChHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhH
Confidence 47999999999995 88 89999999999987631 23445668889999999999999999999999999
Q ss_pred hhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCCCchHHHHHHHHhCCcEEEEe
Q 014296 76 EILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCPVEDVITGISIQCQGWKSVYC 155 (427)
Q Consensus 76 ~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~svtED~~tg~~lh~~GWrs~y~ 155 (427)
+++++ +| ||+.++++||.+++++++++|||+.|+
T Consensus 327 ~al~~--------------vG--------------------------------gf~~~~~~ED~~l~~rl~~~G~ri~~~ 360 (802)
T 4hg6_A 327 RALDE--------------AG--------------------------------GFAGETITEDAETALEIHSRGWKSLYI 360 (802)
T ss_dssp HHHHH--------------HT--------------------------------TCCCSSSSHHHHHHHHHHTTTCCEEEC
T ss_pred HHHHH--------------cC--------------------------------CcCCCCcchHHHHHHHHHHcCCeEEEe
Confidence 99998 35 899999999999999999999999999
Q ss_pred cCCccccccCCCcCHHHHHHHHHHHhhhhHHHHHhhcCccccccCcCChhhhHhhhcccchhHHHHHHHHHHHHHHHHHH
Q 014296 156 KPERDAFLGVSPTTLLQFLVQRKRWSEGDFQIMLCRYSPARYAHGKISLGLRLGYCCYCLWAPNCLATLFYSIVPSLYLL 235 (427)
Q Consensus 156 ~p~~~af~G~aP~~l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~~~~l~~~qrl~y~~~~~~~~~~~~~l~~~~~P~l~Ll 235 (427)
|+.. +.+.+|+|+.++++||+||+.|.+|+++.+ +|++ .+++++.||++|+....+++.+++.++++++|+++++
T Consensus 361 -~~~~-~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~~-~pl~--~~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll 435 (802)
T 4hg6_A 361 -DRAM-IAGLQPETFASFIQQRGRWATGMMQMLLLK-NPLF--RRGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLF 435 (802)
T ss_dssp -CCCC-EEECCCCSHHHHHHHHHHHHHHHHHHHHHS-CTTS--CSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred -cCCE-EEecCCCCHHHHHHHHHHHHccHHHHHHHh-Cccc--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 479999999999999999999999998775 7876 4689999999999998899999999999999999999
Q ss_pred hCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCeeeCc
Q 014296 236 KGIPLFPMISSPWIIPFAYVMFAKYTYSLAEFLWSGGTALGWWNEQRLWLYLRTTSFLFAFIDAILKTLGFSESSFVVTE 315 (427)
Q Consensus 236 ~g~~~~p~~~~~~~l~~~~~~~~~~~~~lle~~~~G~s~~~ww~~qr~w~i~~~s~~l~a~~~~llk~lg~~~~~F~VT~ 315 (427)
+++.+++.....++..++..++. ..++.....+.....||+. +..+...++.+...+...+++++.+|+||+
T Consensus 436 ~~~~~~~~~~~~~~~~~lp~~l~---~~~~~~~~~~~~r~~~~~~-----l~~~~~~~~~~~a~l~~l~~~~~~~f~VT~ 507 (802)
T 4hg6_A 436 FGIEIFVATFEEVLAYMPGYLAV---SFLVQNALFARQRWPLVSE-----VYEVAQAPYLARAIVTTLLRPRSARFAVTA 507 (802)
T ss_dssp HCCCCSCCCHHHHHHHHHHHHHH---HHHHHHHHHTTTSCTTHHH-----HHHHHHHHHHHHHHHHHHHSTTCCCCCCCC
T ss_pred HhHHHhhcCHHHHHHHHHHHHHH---HHHHHHHHhcCcHHHHHHH-----HHHHHHHHHHHHHHHHHHhCCCCCcceECC
Confidence 99988876443322211111110 1111112233333345543 222222222222333334558899999999
Q ss_pred CCCccchhhhhhhhheeecccccchHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 014296 316 KVADEDVSQRYEKEIMEFGAASSMFTILSTLALLNLFCMIGAVKKVIVGDGYVKFYETMLLQILLCSALVLINWPLYQGL 395 (427)
Q Consensus 316 K~~~~~~~~~y~~~~~~f~~~s~l~~p~~~l~~lnl~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~gl 395 (427)
|+.+.+. .+ | +.+..|..++++++++++++|+++.... . ........-.+++.+.++.+.+.+...
T Consensus 508 Kg~~~~~--~~------~---~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~w~~~~l~~l~~~~~~~ 573 (802)
T 4hg6_A 508 KDETLSE--NY------I---SPIYRPLLFTFLLCLSGVLATLVRWVAF-P--GDRSVLLVVGGWAVLNVLLVGFALRAV 573 (802)
T ss_dssp CCCCCSS--CC------B---CTTCHHHHHHHHHHHHHHHHHHHHHHHC-G--GGHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCccccc--cc------h---hhHHHHHHHHHHHHHHHHHHHHHHHhcc-C--CccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 9865432 11 2 3678899999999999999999998764 1 112223334445555555566666666
Q ss_pred hcccCCCCCCh
Q 014296 396 FLRKDNGKMPS 406 (427)
Q Consensus 396 ~~r~~k~~~P~ 406 (427)
..|+++++-|+
T Consensus 574 ~~~~~~R~~~R 584 (802)
T 4hg6_A 574 AEKQQRRAAPR 584 (802)
T ss_dssp BCCCCSCCCCC
T ss_pred hcCCCcccccc
Confidence 76766655554
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.09 E-value=0.00059 Score=72.46 Aligned_cols=115 Identities=11% Similarity=0.065 Sum_probs=71.1
Q ss_pred CChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCcc-chHhH-----------------------------HHHhhh
Q 014296 4 NNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNE-LYSNS-----------------------------LRIYNE 52 (427)
Q Consensus 4 n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~d-~~~~~-----------------------------~~~f~~ 52 (427)
.+|++|.+.+..|. +| +++.|+..+.+.+....- .+..+ ...+..
T Consensus 187 ~~~~~l~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (625)
T 2z86_A 187 PNPLWVQSYMELLAVDD----NVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKN 262 (625)
T ss_dssp ECTTHHHHHHHHHHHCT----TEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCC----ceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcc
Confidence 47999999999987 56 788887766555433110 00000 000000
Q ss_pred hhcccccccCCceeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccC
Q 014296 53 VEFEGMDGYGGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKY 132 (427)
Q Consensus 53 ~~~~g~dg~~g~~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y 132 (427)
.............++|++.++||+++.. +| ||+.
T Consensus 263 ~~~~~~~~~~~~~~~g~~~~~rr~~l~~--------------iG--------------------------------gfde 296 (625)
T 2z86_A 263 TDNLRLCNTPFRFFSGGNVAFAKKWLFR--------------AG--------------------------------WFDE 296 (625)
T ss_dssp TTTTTTCSCGGGGCCTTEEEEETHHHHH--------------HC--------------------------------CCCT
T ss_pred cccccccCCceeEEeeceeeeEHHHHHH--------------hC--------------------------------CCcc
Confidence 0011111112234789999999999998 34 6776
Q ss_pred CCC---CchHHHHHHHHhCCcEEEEecCCccccccCCCcCH
Q 014296 133 GCP---VEDVITGISIQCQGWKSVYCKPERDAFLGVSPTTL 170 (427)
Q Consensus 133 ~sv---tED~~tg~~lh~~GWrs~y~~p~~~af~G~aP~~l 170 (427)
... .||.+.++|++.+||+..|+ |+..+ .-..|.+-
T Consensus 297 ~~~~~g~ED~dl~~Rl~~~G~~i~~~-p~~~v-~H~~~~~~ 335 (625)
T 2z86_A 297 EFTHWGGEDNEFGYRLYREGCYFRSV-EGAMA-YHQEPPGK 335 (625)
T ss_dssp TCSSCCCHHHHHHHHHHHTTCEEEEC-GGGCE-EEECCC--
T ss_pred ccccCCcchhhhhhhHHhCCceEEEc-ccchh-hccCCccc
Confidence 664 59999999999999999999 54444 34455443
No 3
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=96.79 E-value=0.00044 Score=67.24 Aligned_cols=60 Identities=8% Similarity=-0.045 Sum_probs=43.4
Q ss_pred cccCCCC---CchHHHHHHHHhCCcEEEEecCCcccc----------ccCCCcCHHHHHHHHHHHhhhhHHHH
Q 014296 129 GLKYGCP---VEDVITGISIQCQGWKSVYCKPERDAF----------LGVSPTTLLQFLVQRKRWSEGDFQIM 188 (427)
Q Consensus 129 G~~y~sv---tED~~tg~~lh~~GWrs~y~~p~~~af----------~G~aP~~l~~~l~Qr~RWa~G~~qi~ 188 (427)
||+..-. .||.+...|++.+||+..+..+....+ .-..|+.+....+|++||+.+.++.+
T Consensus 191 GFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 191 GFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp SCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 6765443 599999999999999887432210000 13478999999999999999988775
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=95.60 E-value=0.0063 Score=64.47 Aligned_cols=128 Identities=11% Similarity=-0.032 Sum_probs=81.2
Q ss_pred CChhHHHHHhhhhc-CCCCCCeEEEEecCCccccCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcCCC
Q 014296 4 NNSQAVRDALCFFM-DEEKGHEFAFVQFPQNFDNVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGRK 82 (427)
Q Consensus 4 n~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~~~ 82 (427)
.+|+.|.+.+..|. +| +++.|.+...+.+.+.+..... +.......+.+....++|++.++||++++.+
T Consensus 467 ~~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~- 536 (625)
T 2z86_A 467 LEPDAVELCLDEFRKDL----SLACVYTTNRNIDREGNLISNG-----YNWPIYSREKLTSAMICHHFRMFTARAWNLT- 536 (625)
T ss_dssp ECTTHHHHHHHHHHHCT----TCSEEEEEEEEECTTSCEEEEC-----CCCSSCCHHHHTTSCCCCSCEEEEHHHHTTT-
T ss_pred cChhHHHHHHHHHHhCC----CeeEEEeeeEEECCCCCEeccC-----cccccCCHHHHhhcccCCceEEEEHHHHHHh-
Confidence 36899999998875 67 7889988766655443221100 0000011222344567889999999999884
Q ss_pred CCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCC-CCCchHHHHHHHHhCCcEEEEecCCccc
Q 014296 83 YDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYG-CPVEDVITGISIQCQGWKSVYCKPERDA 161 (427)
Q Consensus 83 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~-svtED~~tg~~lh~~GWrs~y~~p~~~a 161 (427)
| ||+.. ...||.+..+|+..+| +..|+ |+...
T Consensus 537 -------------g--------------------------------gfd~~~~~~eD~dl~~r~~~~g-~~~~~-~~~~~ 569 (625)
T 2z86_A 537 -------------E--------------------------------GFNESISNAVDYDMYLKLSEVG-PFKHI-NKICY 569 (625)
T ss_dssp -------------T--------------------------------CCCSSCSSCHHHHHHHHHTTTS-CEEEE-EEEEE
T ss_pred -------------C--------------------------------CCCCccCChHHHHHHHHHHHhC-CEEEe-CCcEE
Confidence 4 77654 3679999999999999 88888 43332
Q ss_pred cc--cCCCcCHHHHHHHHHHHhhhhHHHH
Q 014296 162 FL--GVSPTTLLQFLVQRKRWSEGDFQIM 188 (427)
Q Consensus 162 f~--G~aP~~l~~~l~Qr~RWa~G~~qi~ 188 (427)
.+ .....+......|+++|.....+.+
T Consensus 570 ~~r~h~~~~s~~~~~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 570 NRVLHGENTSIKKLDIQKENHFKVVNESL 598 (625)
T ss_dssp EEECC----CCSSHHHHHHHHHHHHHHHT
T ss_pred EEEECCCccchhhHHHHHHHHHHHHHHHH
Confidence 21 3344566666778888776555544
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=95.51 E-value=0.015 Score=59.37 Aligned_cols=86 Identities=13% Similarity=0.007 Sum_probs=60.5
Q ss_pred CCceeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCC---Cch
Q 014296 62 GGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VED 138 (427)
Q Consensus 62 ~g~~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~sv---tED 138 (427)
..+...|+..++||++++++ | ||+.+.. .||
T Consensus 200 ~~~~~~g~~~~irr~~~~~i--------------G--------------------------------gfde~~~~~g~ED 233 (472)
T 1xhb_A 200 RTPTMAGGLFSIDRDYFQEI--------------G--------------------------------TYDAGMDIWGGEN 233 (472)
T ss_dssp ECSBCCSSSEEEEHHHHHHT--------------T--------------------------------SCCTTSCTTCCCC
T ss_pred cCccccceeEEEEHHHHHHc--------------C--------------------------------CCCCcccccCchh
Confidence 34556788888999999984 4 6766554 799
Q ss_pred HHHHHHHHhCCcEEEEecCCcccc---ccCCCc----C-----HHHHHHHHHHHhhhhHHHHHhhcCcc
Q 014296 139 VITGISIQCQGWKSVYCKPERDAF---LGVSPT----T-----LLQFLVQRKRWSEGDFQIMLCRYSPA 195 (427)
Q Consensus 139 ~~tg~~lh~~GWrs~y~~p~~~af---~G~aP~----~-----l~~~l~Qr~RWa~G~~qi~~~~~~Pl 195 (427)
++.++|+...|++..|+ |..... ....|. . ....+++..||..+..+.+..+ .|-
T Consensus 234 ~dl~~R~~~~G~~i~~~-p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~-~p~ 300 (472)
T 1xhb_A 234 LEISFRIWQCGGTLEIV-TCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII-SPG 300 (472)
T ss_dssp SHHHHHHHHTTCEEEEE-EEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHT-STT
T ss_pred HHHHHHHHhcCCeEEEc-cCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-Ccc
Confidence 99999999999999998 432210 112222 1 4567778889999999988765 453
No 6
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=95.49 E-value=0.0041 Score=57.48 Aligned_cols=121 Identities=7% Similarity=-0.085 Sum_probs=66.3
Q ss_pred ChhHHHHHhhhhc-CCCCCCeEEEEecCCccc--cCCCccchHhHHHHhhhhhcccccccCCceeccccceeehhhhcCC
Q 014296 5 NSQAVRDALCFFM-DEEKGHEFAFVQFPQNFD--NVTKNELYSNSLRIYNEVEFEGMDGYGGPIYCGSGCFHRREILCGR 81 (427)
Q Consensus 5 ~p~~l~~~l~~f~-Dp~~~~~vafVQ~PQ~F~--n~~~~d~~~~~~~~f~~~~~~g~dg~~g~~~~GTg~~~RR~aL~~~ 81 (427)
+|+++.+.+..+. +| ++++|.+..... +.+...... . ... .............|++.++||+++..+
T Consensus 102 ~~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~-~----~~~-~~~~~~~~~~~~~~~~~~~rr~~~~~~ 171 (255)
T 1qg8_A 102 MPDRLLKMVRELDTHP----EKAVIYSASKTYHLNENRDIVKE-T----VRP-AAQVTWNAPCAIDHCSVMHRYSVLEKV 171 (255)
T ss_dssp CTTHHHHHHHHHHHCT----TCCEEEEEEEEEEEC---CEEEE-E----EEC-CCSCBSCCTTTSCGGGEEEETHHHHHH
T ss_pred ChHHHHHHHHHHHhCC----CceEEEeceEEEEeCCCCcchhh-c----cCc-hHHHHHhhcCCCccceEEEEHHHHHhh
Confidence 6899999999987 56 688888876665 332221110 0 000 001111233456789999999999873
Q ss_pred CCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccc-------cCCCCCchHHHHHHHHhCCcEEEE
Q 014296 82 KYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGL-------KYGCPVEDVITGISIQCQGWKSVY 154 (427)
Q Consensus 82 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~-------~y~svtED~~tg~~lh~~GWrs~y 154 (427)
| .|| ......||.+..+|+..+| +..|
T Consensus 172 --------------g-------------------------------~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~ 205 (255)
T 1qg8_A 172 --------------K-------------------------------EKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYP 205 (255)
T ss_dssp --------------H-------------------------------HHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEE
T ss_pred --------------c-------------------------------ccccccccCCcccchHHHHHHHHHHHHhC-CEEE
Confidence 2 023 2224689999999999987 6777
Q ss_pred ecCCccccccCCCcCHHHHH--HHHHHHhh
Q 014296 155 CKPERDAFLGVSPTTLLQFL--VQRKRWSE 182 (427)
Q Consensus 155 ~~p~~~af~G~aP~~l~~~l--~Qr~RWa~ 182 (427)
+ |+....+-..|.+..... .|+.||..
T Consensus 206 ~-~~~~~~~r~~~~s~s~~~~~~~~~~~~~ 234 (255)
T 1qg8_A 206 L-DEELDLNYITDQSIHFQLFELEKNEFVR 234 (255)
T ss_dssp E-EEEEEEEEEC--------------CTGG
T ss_pred e-cCcEEEEEEcCCccchhHHHHHHHHHHH
Confidence 7 444444555667766655 44444543
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=95.46 E-value=0.012 Score=62.34 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=62.1
Q ss_pred CceeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCC---CchH
Q 014296 63 GPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VEDV 139 (427)
Q Consensus 63 g~~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~sv---tED~ 139 (427)
.+...|++.++||++++++ | ||+.+.. .||+
T Consensus 281 ~~~~~g~~~~irr~~~~~i--------------G--------------------------------gfDe~~~~~g~ED~ 314 (570)
T 2d7i_A 281 SPVMAGGLFAVDRKWFWEL--------------G--------------------------------GYDPGLEIWGGEQY 314 (570)
T ss_dssp CSSCCSSSEEEEHHHHHHT--------------T--------------------------------SSCTTCCSSSSHHH
T ss_pred cccccceEEEEEHHHHHhc--------------C--------------------------------CCCCcccccCcchH
Confidence 4556799999999999984 4 6765554 5999
Q ss_pred HHHHHHHhCCcEEEEecCCccc---cccCCCcC-------HHHHHHHHHHHhhhhHHHHHhhcCcc
Q 014296 140 ITGISIQCQGWKSVYCKPERDA---FLGVSPTT-------LLQFLVQRKRWSEGDFQIMLCRYSPA 195 (427)
Q Consensus 140 ~tg~~lh~~GWrs~y~~p~~~a---f~G~aP~~-------l~~~l~Qr~RWa~G~~qi~~~~~~Pl 195 (427)
+.++|+...||+.+|+ |.... +.+..|.+ .........||.....+.+..+ +|-
T Consensus 315 dl~~Rl~~~G~~i~~~-p~~~v~H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~-~p~ 378 (570)
T 2d7i_A 315 EISFKVWMCGGRMEDI-PCSRVGHIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-RPE 378 (570)
T ss_dssp HHHHHHHHTTCEEEEE-EEEEEEECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT-CGG
T ss_pred HHHHHHHhCCCeEEEc-cCeEEEEEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-Ccc
Confidence 9999999999999998 43222 12333321 4567777889999999887765 453
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=95.00 E-value=0.011 Score=53.97 Aligned_cols=28 Identities=14% Similarity=0.131 Sum_probs=23.8
Q ss_pred cccCC--CCCchHHHHHHHHhCCcEEEEec
Q 014296 129 GLKYG--CPVEDVITGISIQCQGWKSVYCK 156 (427)
Q Consensus 129 G~~y~--svtED~~tg~~lh~~GWrs~y~~ 156 (427)
||+.+ ...||.+..+|+..+|++..|++
T Consensus 189 ~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~ 218 (240)
T 3bcv_A 189 RFVSERILPSEDLIFNVDVLANSNIVCVLP 218 (240)
T ss_dssp CCCCTTTCTTHHHHHHHHHHTTCSCEEECC
T ss_pred ccCCCCCccCCCHHHHHHHHHhCCEEEEEC
Confidence 56654 45799999999999999999993
No 9
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=93.54 E-value=0.081 Score=54.53 Aligned_cols=100 Identities=10% Similarity=0.025 Sum_probs=62.4
Q ss_pred CCceeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhcccccccccccccccccccccCCCC---Cch
Q 014296 62 GGPIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLKYGCP---VED 138 (427)
Q Consensus 62 ~g~~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~y~sv---tED 138 (427)
..+...|.+.++||++++.+ | ||+.+.. .||
T Consensus 232 ~~~~~~g~~~~irr~~~~~i--------------G--------------------------------gfde~~~~~g~ED 265 (501)
T 2ffu_A 232 KTPMIAGGLFVMDKFYFEEL--------------G--------------------------------KYDMMMDVWGGEN 265 (501)
T ss_dssp ECSSCCSSSEEEEHHHHHHT--------------T--------------------------------CCCTTCCSSSSHH
T ss_pred cCccccceEEEEEHHHHHHh--------------C--------------------------------CCCccccccCcch
Confidence 34556788999999999984 4 6765543 899
Q ss_pred HHHHHHHHhCCcEEEEecCCccccc---cCC----CcC-----HHHHHHHHHHHhhhhHHHHHhhcCccccc--c----C
Q 014296 139 VITGISIQCQGWKSVYCKPERDAFL---GVS----PTT-----LLQFLVQRKRWSEGDFQIMLCRYSPARYA--H----G 200 (427)
Q Consensus 139 ~~tg~~lh~~GWrs~y~~p~~~af~---G~a----P~~-----l~~~l~Qr~RWa~G~~qi~~~~~~Pl~~~--~----~ 200 (427)
++.++|+...|++..|+ |...... ... |.. .....+...+|..+..+.+..+ .|.... . .
T Consensus 266 ~dl~~Rl~~~G~~i~~~-p~~~v~H~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~-~p~~~~~~~g~~~~ 343 (501)
T 2ffu_A 266 LEISFRVWQCGGSLEII-PCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAA-VPSARNVPYGNIQS 343 (501)
T ss_dssp HHHHHHHHHTTCEEEEE-EEEEEEECCCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHH-CGGGGGCCCCCCHH
T ss_pred HHHHHHHHhcCCeEEEc-cCcEEEEEccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhc-CcccccCCccchHH
Confidence 99999999999999998 4221111 111 222 2334444556666666665554 565421 1 2
Q ss_pred cCChhhhHh
Q 014296 201 KISLGLRLG 209 (427)
Q Consensus 201 ~l~~~qrl~ 209 (427)
++.+++|+.
T Consensus 344 r~~lr~~l~ 352 (501)
T 2ffu_A 344 RLELRKKLS 352 (501)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 344666664
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=92.10 E-value=0.11 Score=55.97 Aligned_cols=70 Identities=13% Similarity=0.089 Sum_probs=48.3
Q ss_pred ceeccccceeehhhhcCCCCCchhHHHHhhccchhhhhhHHHHHHhhccccccccccccccccccccc-CCCCCchHHHH
Q 014296 64 PIYCGSGCFHRREILCGRKYDKETKIELKRENDSKREESLLELEETSKALASCTYETNTQWGKEIGLK-YGCPVEDVITG 142 (427)
Q Consensus 64 ~~~~GTg~~~RR~aL~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~va~c~Ye~~t~wG~e~G~~-y~svtED~~tg 142 (427)
....|+++++||++++.+ | |+. +..--||++.+
T Consensus 363 ~~~~g~~~lirr~v~~~v--------------G--------------------------------gfd~~F~~~ED~Dl~ 396 (657)
T 4fix_A 363 DYNGWWTCMIPRQVAEEL--------------G--------------------------------QPLPLFIKWDDADYG 396 (657)
T ss_dssp SBCCTTEEEEEHHHHHHH--------------C--------------------------------SCCSCSSSSHHHHHH
T ss_pred cccchhHhHhhHHHHHHh--------------C--------------------------------CChhHhccCcHHHHH
Confidence 346789999999999983 4 443 22235999999
Q ss_pred HHHHhCCcEEEEecCCccccc---cCCCc--CHHHHHHHHHHH
Q 014296 143 ISIQCQGWKSVYCKPERDAFL---GVSPT--TLLQFLVQRKRW 180 (427)
Q Consensus 143 ~~lh~~GWrs~y~~p~~~af~---G~aP~--~l~~~l~Qr~RW 180 (427)
+|+..+||+.+|+ |+...+. ...+. ....+...|.|+
T Consensus 397 lR~~~~G~ki~~~-p~a~V~H~~~~~~~~~s~~r~Yy~~RN~l 438 (657)
T 4fix_A 397 LRAAEHGYPTVTL-PGAAIWHMAWSDKDDAIDWQAYFHLRNRL 438 (657)
T ss_dssp HHHHHTTCCEEEE-EEEEEEECCSSSSCCTTSTHHHHHHHHHH
T ss_pred HHHHHcCCeEEEE-CCEEEEEcCcCccccccHHHHHHHHHHHH
Confidence 9999999999998 5433322 11111 257777777776
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=83.47 E-value=0.22 Score=53.87 Aligned_cols=29 Identities=10% Similarity=-0.270 Sum_probs=0.0
Q ss_pred cccCC-CCCchHHHHHHHHhCCcEEEEecC
Q 014296 129 GLKYG-CPVEDVITGISIQCQGWKSVYCKP 157 (427)
Q Consensus 129 G~~y~-svtED~~tg~~lh~~GWrs~y~~p 157 (427)
||+.+ ...||.+..+|+..+|++..|+.|
T Consensus 170 ~fde~~~~~ED~d~~~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 170 RFNENLNTYVDWSFVLEYMKYVNKFVRIFN 199 (729)
T ss_dssp ------------------------------
T ss_pred CcCCCCCcccCHHHHHHHHHhcCCEEEecC
Confidence 56555 368999999999999999999944
No 12
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=81.59 E-value=2 Score=41.44 Aligned_cols=25 Identities=8% Similarity=-0.120 Sum_probs=19.3
Q ss_pred CChhHHHHHhhhh-cCCCCCCeEEEEecCC
Q 014296 4 NNSQAVRDALCFF-MDEEKGHEFAFVQFPQ 32 (427)
Q Consensus 4 n~p~~l~~~l~~f-~Dp~~~~~vafVQ~PQ 32 (427)
.+|+++.+.+..+ .+| ++++|+...
T Consensus 145 ~~p~~l~~l~~~l~~~~----~~~~v~g~~ 170 (329)
T 3ckj_A 145 PHPMFVPWLVGPLLTGD----GVHLVKSFY 170 (329)
T ss_dssp CCTTHHHHHHHHHHSCS----SCCEEEEEE
T ss_pred cChHHHHHHHHHHHhCC----CccEEEEEe
Confidence 4789999999885 466 688887753
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=54.75 E-value=9.7 Score=34.92 Aligned_cols=22 Identities=5% Similarity=-0.176 Sum_probs=19.9
Q ss_pred CchHHHHHHHHhCCcEEEEecCC
Q 014296 136 VEDVITGISIQCQGWKSVYCKPE 158 (427)
Q Consensus 136 tED~~tg~~lh~~GWrs~y~~p~ 158 (427)
.||++..+|+..+||+..|+ |.
T Consensus 177 ~~D~Dl~~R~~~~G~~~~~~-p~ 198 (249)
T 2nxv_A 177 YYGADLCLQAEFLGGRAYAI-DF 198 (249)
T ss_dssp SHHHHHHHHHHHTTCEEEEC-CC
T ss_pred eehhHHHHHHHHcCCeEEEe-cc
Confidence 48999999999999999988 64
Done!