BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014302
(427 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58742|AAAS_MOUSE Aladin OS=Mus musculus GN=Aaas PE=1 SV=1
Length = 546
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 145/363 (39%), Gaps = 61/363 (16%)
Query: 102 LQGVSWHQH--KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSL 159
L+ +WH H K VA + S +R Y + L QR+V L W+P L
Sbjct: 154 LRVFAWHPHTNKFAVALLDDS----IRVYNANSTIVPSLKHRLQRNVAALAWKPLSASVL 209
Query: 160 SVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW 219
+V C+ I IW + SG A L P +T+L+W
Sbjct: 210 AVACQSCILIWTLDPTSLSTRPSSGCAQVLSHPGHTP-----------------VTSLAW 252
Query: 220 GPDGRFPGLGTPIR-------------------RGFGGLSILKWSPTGDYFFAAKFDGTF 260
P+G + +P+ RG GG++ L WSP G A F
Sbjct: 253 APNGGWLLSASPVDAVILVWDVSTETCVPLPWFRG-GGVTNLLWSPDGSKVLATTPSAVF 311
Query: 261 YLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLP 320
+WE WT E W + SG W P+G +L G + S+ F + + H+
Sbjct: 312 RVWEAQMWTCEAWPTLSGRCQTGCWSPDGNRLLFTVLGEALIYSLSFPERCGTGKGHVGG 371
Query: 321 VDLPDIVSLTGSQGIE-------------KIAWDASGERLAVSYKGGDDIYKG--LIAIY 365
IV+ I+ + WD SGERLAV KG + G +I ++
Sbjct: 372 AKSATIVADLSETTIQTPDGEERLGGEAHSMVWDPSGERLAVLMKGNPQVQDGNPVILLF 431
Query: 366 DARRTPLISLSLIGFIRG-PGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIFRSH 424
R +P+ L G I+G PG + + +FH F +G LLSVCWS+G PL F +
Sbjct: 432 RTRNSPVFELLPCGIIQGEPGAQAQLI--TFHPSFNKGALLSVCWSTGRITHIPLYFVNA 489
Query: 425 LLP 427
P
Sbjct: 490 QFP 492
>sp|Q9NRG9|AAAS_HUMAN Aladin OS=Homo sapiens GN=AAAS PE=1 SV=1
Length = 546
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 143/363 (39%), Gaps = 61/363 (16%)
Query: 102 LQGVSWHQH--KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSL 159
L+ +WH H K VA + S VR Y S L QR+V L W+P L
Sbjct: 154 LRVFAWHPHTNKFAVALLDDS----VRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVL 209
Query: 160 SVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW 219
+V C+ I IW + SG A L P +T+L+W
Sbjct: 210 AVACQSCILIWTLDPTSLSTRPSSGCAQVLSHPGHTP-----------------VTSLAW 252
Query: 220 GPDGRFPGLGTPIRRGF------------------GGLSILKWSPTGDYFFAAKFDGTFY 261
P G +P+ GG++ L WSP G A F
Sbjct: 253 APSGGRLLSASPVDAAIRVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPSAVFR 312
Query: 262 LWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF------------AS 309
+WE WT E W + SG W P+G +L G + S+ F +
Sbjct: 313 VWEAQMWTCERWPTLSGRCQTGCWSPDGSRLLFTVLGEPLIYSLSFPERCGEGKGCVGGA 372
Query: 310 KPPSLDAHL--LPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKG--LIAIY 365
K ++ A L + PD G + + WD SGERLAV KG + G +I ++
Sbjct: 373 KSATIVADLSETTIQTPDGEERLGGEA-HSMVWDPSGERLAVLMKGKPRVQDGKPVILLF 431
Query: 366 DARRTPLISLSLIGFIRG-PGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIFRSH 424
R +P+ L G I+G PG P+ + +FH F +G LLSV WS+G PL F +
Sbjct: 432 RTRNSPVFELLPCGIIQGEPGAQPQLI--TFHPSFNKGALLSVGWSTGRIAHIPLYFVNA 489
Query: 425 LLP 427
P
Sbjct: 490 QFP 492
>sp|Q86HX1|HIRA_DICDI Protein HIRA OS=Dictyostelium discoideum GN=hira PE=3 SV=1
Length = 1114
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 232 IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGR 290
+R +S + WSP Y FD + +WETN + GFV G TWDP GR
Sbjct: 117 LRGHASDISEVSWSPDNKYIATCSFDKSIIIWETNKFQMVSKLEEHKGFVKGLTWDPLGR 176
Query: 291 MI 292
+
Sbjct: 177 YL 178
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 42/191 (21%)
Query: 129 EDSG--KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGIC-IWAPSYPGNAASVRSGA 185
ED+G K C + + V ++W +G + L+ G +C IW S
Sbjct: 52 EDAGIPKLLCSIENAHFHSVNSVKWSKDG-KYLASGSDDKLCMIWGLSNNN--------- 101
Query: 186 ASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG-----------------L 228
+L + W V LR I+ +SW PD ++ +
Sbjct: 102 -----SLLKNTTENWVCVATLRGH-ASDISEVSWSPDNKYIATCSFDKSIIIWETNKFQM 155
Query: 229 GTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTW-----TSEPWS-STSGFVTG 282
+ + G + L W P G Y + D + +W T+ W +EP+ S + F
Sbjct: 156 VSKLEEHKGFVKGLTWDPLGRYLASQSEDKSLIIWRTSDWVVETIVTEPFKHSGNSFFLR 215
Query: 283 ATWDPEGRMIL 293
+W P+G+ I+
Sbjct: 216 PSWTPDGQFIV 226
>sp|O42611|HIRA_TAKRU Protein HIRA OS=Takifugu rubripes GN=hira PE=2 SV=1
Length = 1025
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 34/178 (19%)
Query: 146 VKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGT-RWTLVD 204
V + W NG S G + +W AA + G ++ G+ ++ +W V
Sbjct: 73 VNCVRWSNNGLYLASGGDDKLVMVWK-----RAALI--GPSTVFGSSNKLANVEQWRCVT 125
Query: 205 FLRSQNGEQITALSWGPDG------------------RFPGLGTPIRRGFGGLSILKWSP 246
LR+ G+ + +SW P +FP + T +R G + L W P
Sbjct: 126 ILRNHTGD-VMDVSWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGLTWDP 184
Query: 247 TGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSG--FVTGATWDPEGRMILLAFA 297
G Y + D + +W T W E P+S G V +W P+G+ ++ A A
Sbjct: 185 VGKYIASQADDHSLRVWRTVDWQMEANITKPFSECGGTTHVLRLSWSPDGQYLVSAHA 242
>sp|Q8QFR2|HIRA_XENLA Protein HIRA OS=Xenopus laevis GN=hira PE=1 SV=2
Length = 1013
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 34/178 (19%)
Query: 146 VKVLEWRPNGGRSLSVGCKGGICIWAPS-YPGNAASVRSGAASFLGALSRGPGTRWTLVD 204
V + W NG S G I +W S Y G S G++S L + + W +
Sbjct: 73 VNCVRWSNNGAYLASGGDDKLIMVWKRSGYIG--PSTVFGSSSKLANVEQ-----WRCLS 125
Query: 205 FLRSQNGEQITALSWGPDG------------------RFPGLGTPIRRGFGGLSILKWSP 246
LRS +G+ + ++W P +FP + + +R G + L W P
Sbjct: 126 ILRSHSGD-VMDVAWSPHDAWLASCSVDNTVVIWNALKFPEIISTLRGHSGLVKGLTWDP 184
Query: 247 TGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSG--FVTGATWDPEGRMILLAFA 297
G Y + D + +W T W E P+ G V +W P+G ++ A A
Sbjct: 185 VGKYIASQADDHSIKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHA 242
>sp|P79987|HIRA_CHICK Protein HIRA OS=Gallus gallus GN=HIRA PE=1 SV=2
Length = 1019
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 34/178 (19%)
Query: 146 VKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGT-RWTLVD 204
V + W NG S G I +W AA + G ++ G+ S+ +W V
Sbjct: 73 VNCVRWSNNGVYLASGGDDKLIMVWK-----RAAYI--GPSTVFGSSSKLTNVEQWRCVS 125
Query: 205 FLRSQNGEQITALSWGPDG------------------RFPGLGTPIRRGFGGLSILKWSP 246
LRS +G+ + ++W P +FP + ++ G + L W P
Sbjct: 126 ILRSHSGD-VMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGLTWDP 184
Query: 247 TGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSG--FVTGATWDPEGRMILLAFA 297
G Y + D + +W T W E P+ G V +W P+G ++ A A
Sbjct: 185 VGKYIASQADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHA 242
>sp|Q1GE19|TOLB_RUEST Protein TolB OS=Ruegeria sp. (strain TM1040) GN=tolB PE=3 SV=1
Length = 441
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 28/128 (21%)
Query: 205 FLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYF-FAAKFDGTFYLW 263
++ S +G + +S+G GR+ GTP+ WSP GDY F + G F++
Sbjct: 323 YVMSASGGEAKRISFG-QGRY---GTPV-----------WSPRGDYIAFTKQNAGRFHIG 367
Query: 264 ETNTWTSEPWSSTSGFV-TGATWDPEGRMILLA-----FAGSLTLGSIHFASKPPSLDAH 317
T SE T+ F+ G TW P GR+I+ +G L S+ + + +
Sbjct: 368 VMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGQARLYSVDISGR------N 421
Query: 318 LLPVDLPD 325
L PV PD
Sbjct: 422 LKPVKTPD 429
>sp|Q61666|HIRA_MOUSE Protein HIRA OS=Mus musculus GN=Hira PE=1 SV=3
Length = 1015
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 74/200 (37%), Gaps = 39/200 (19%)
Query: 129 EDSGKDACILTSDSQRD-----VKVLEWRPNGGRSLSVGCKGGICIWA-PSYPGNAASVR 182
ED KD I Q D V + W +G S G I +W +Y G S
Sbjct: 51 EDDEKDENIPKMLCQMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIG--PSTV 108
Query: 183 SGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG------------------R 224
G++ L + + W V LRS +G+ + ++W P +
Sbjct: 109 FGSSGKLANVEQ-----WRCVSILRSHSGD-VMDVAWSPHDAWLASCSVDNTVVIWNAVK 162
Query: 225 FPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSG- 278
FP + +R G + L W P G Y + D + +W T W E P+ G
Sbjct: 163 FPEILATLRGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGT 222
Query: 279 -FVTGATWDPEGRMILLAFA 297
V +W P+G ++ A A
Sbjct: 223 THVLRLSWSPDGHYLVSAHA 242
>sp|P0CN44|EIF3B_CRYNJ Eukaryotic translation initiation factor 3 subunit B
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=PRT1 PE=3 SV=1
Length = 753
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 277 SGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGS---Q 333
S W P+GR I LA GS + I F ++D +L V++ G+
Sbjct: 539 SKMANTLVWSPKGRHIALATIGSSSKYDIEFWDLDFTIDERREAAELGANVTMLGTGEHY 598
Query: 334 GIEKIAWDASGERLAVS 350
GI +IAWD SG +A S
Sbjct: 599 GITEIAWDPSGRYIATS 615
>sp|P0CN45|EIF3B_CRYNB Eukaryotic translation initiation factor 3 subunit B
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=PRT1 PE=3 SV=1
Length = 753
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 277 SGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGS---Q 333
S W P+GR I LA GS + I F ++D +L V++ G+
Sbjct: 539 SKMANTLVWSPKGRHIALATIGSSSKYDIEFWDLDFTIDERREAAELGANVTMLGTGEHY 598
Query: 334 GIEKIAWDASGERLAVS 350
GI +IAWD SG +A S
Sbjct: 599 GITEIAWDPSGRYIATS 615
>sp|P54198|HIRA_HUMAN Protein HIRA OS=Homo sapiens GN=HIRA PE=1 SV=2
Length = 1017
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 74/200 (37%), Gaps = 39/200 (19%)
Query: 129 EDSGKDACILTSDSQRD-----VKVLEWRPNGGRSLSVGCKGGICIWA-PSYPGNAASVR 182
ED KD I Q D V + W +G S G I +W +Y G S
Sbjct: 51 EDDEKDENIPKMLCQMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIG--PSTV 108
Query: 183 SGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG------------------R 224
G++ L + + W V LR+ +G+ + ++W P +
Sbjct: 109 FGSSGKLANVEQ-----WRCVSILRNHSGD-VMDVAWSPHDAWLASCSVDNTVVIWNAVK 162
Query: 225 FPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSG- 278
FP + +R G + L W P G Y + D + +W T W E P+ G
Sbjct: 163 FPEILATLRGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGT 222
Query: 279 -FVTGATWDPEGRMILLAFA 297
V +W P+G ++ A A
Sbjct: 223 THVLRLSWSPDGHYLVSAHA 242
>sp|Q09589|HIRA_CAEEL Protein HIRA homolog OS=Caenorhabditis elegans GN=K10D2.1 PE=3 SV=2
Length = 935
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 44/183 (24%)
Query: 141 DSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGT-- 198
+SQ W P+G R + +W Y G S +G+++ G
Sbjct: 72 ESQSQSNSCRWSPDGKRFAFGSDDSSVSVW--EYVGLINS--------MGSITGGAQNVE 121
Query: 199 RWTLVDFLRSQNGEQITALSWGPDGRFPGLGT---------------------PIRRGFG 237
R+ LR + E +T + W P+G++ G+ I+
Sbjct: 122 RYKECCVLRGHSMEVLT-VEWSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDIQLPVK 180
Query: 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTW-----TSEPWSST--SGFVTGATWDPEGR 290
GLS W P G Y + + D W T++W +EP+ S +T W P+G+
Sbjct: 181 GLS---WDPIGKYLASLEGDKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGK 237
Query: 291 MIL 293
++
Sbjct: 238 YLM 240
>sp|A8LHQ6|TOLB_DINSH Protein TolB OS=Dinoroseobacter shibae (strain DFL 12) GN=tolB PE=3
SV=1
Length = 446
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 35/209 (16%)
Query: 114 VAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAP 172
V F++ S+ +++ D + TS + ++ N RS +G +GG +AP
Sbjct: 203 VQFLTDSSAIVLAPRFSPTGDRVLYTSYATGRPQITLLDVNSVRSQGLGSAQGGEMSFAP 262
Query: 173 SYPGNAASV----RSGAAS--FLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-- 224
+ + SV +G S + LS G TR T + TA S+ PDGR
Sbjct: 263 RFSPDGRSVVFSLTNGGNSDIYRRDLSSGAQTRLTATPAIE-------TAPSFSPDGRQI 315
Query: 225 --------------FPGLGTPIRR---GFGGLSILKWSPTGDYF-FAAKFDGTFYLWETN 266
G RR G G WSP GD F + G F++
Sbjct: 316 VFESDRSGSQQLYVMSATGGEARRISFGPGRYGTPVWSPRGDLIAFTKQNQGRFHIGVMR 375
Query: 267 TWTSEPWSSTSGFVTGA-TWDPEGRMILL 294
T SE TS F+ + TW P GR+I+
Sbjct: 376 TDGSEERLLTSSFLDESPTWSPNGRVIMF 404
>sp|Q28TS0|TOLB_JANSC Protein TolB OS=Jannaschia sp. (strain CCS1) GN=tolB PE=3 SV=1
Length = 445
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 26/146 (17%)
Query: 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR----- 224
++PS S+ G+ + + +L GTR L +Q TA S+ PDG
Sbjct: 263 FSPSGQSVVFSLVDGSNTDIYSLDLATGTRRQL-----TQAPSIETAPSFSPDGSQIVFE 317
Query: 225 -----------FPGLGTPIRR---GFGGLSILKWSPTGDYF-FAAKFDGTFYLWETNTWT 269
P G RR G G WSP GDY F + +G F++ T
Sbjct: 318 SDRSGNQQIYIMPADGGEARRVSAGTGRYGTPVWSPRGDYIAFTKQENGRFHIGVMRTDG 377
Query: 270 SEPWSSTSGFV-TGATWDPEGRMILL 294
S+ TS F+ G TW P GR+I+
Sbjct: 378 SDERLLTSSFLDEGPTWAPNGRVIMF 403
>sp|Q5DFU0|CIAO1_SCHJA Probable cytosolic iron-sulfur protein assembly protein
OS=Schistosoma japonicum PE=2 SV=1
Length = 352
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 239 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGAT-------WDPEGRM 291
+ + WSP G Y +A FDGT +W+ + S P + G T W P G +
Sbjct: 63 IRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHL 122
Query: 292 ILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERL-AVS 350
I A S+ D + V P SQ ++ +AW GE L + S
Sbjct: 123 I----ATCGRDKSVWLWEFDDEEDVQCVSVLQPH------SQDVKSVAWHPHGEVLVSTS 172
Query: 351 YKGGDDIYK 359
Y ++Y+
Sbjct: 173 YDNKINVYR 181
>sp|Q5LNU4|TOLB_RUEPO Protein TolB OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 /
DSS-3) GN=tolB PE=3 SV=1
Length = 439
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 28/128 (21%)
Query: 205 FLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYF-FAAKFDGTFYLW 263
++ S G + T +S+G GR+ GTP+ WSP GD F + G F++
Sbjct: 321 YVMSAAGGEATRISFG-QGRY---GTPV-----------WSPRGDLIAFTKQSKGRFHIG 365
Query: 264 ETNTWTSEPWSSTSGFV-TGATWDPEGRMILLA-----FAGSLTLGSIHFASKPPSLDAH 317
SE T+ F+ G TW P GR+I+ +G L S+ + + +
Sbjct: 366 VMRADGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRAALYSVDISGR------N 419
Query: 318 LLPVDLPD 325
L PV PD
Sbjct: 420 LRPVRTPD 427
>sp|P52048|YGGP_ECOLI Uncharacterized protein YggP OS=Escherichia coli (strain K12)
GN=yggP PE=4 SV=1
Length = 425
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 287 PEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDI----------VSLTGSQGIE 336
P G + LLA AG + +G+I +A + ++ VD+ D V L S+GIE
Sbjct: 174 PGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIE 233
Query: 337 KIAWDASGE-------RLAVSYKGGDDI--YKGLIAIYDARRTPLISLSLIGFIRGPGDN 387
+ + G R G DDI Y + A+ + L + F GP D
Sbjct: 234 LVYVNTKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDK 293
Query: 388 PKPVAFSFHD 397
V F+F++
Sbjct: 294 NFKVPFNFYN 303
>sp|Q167Z6|TOLB_ROSDO Protein TolB OS=Roseobacter denitrificans (strain ATCC 33942 / OCh
114) GN=tolB PE=3 SV=1
Length = 443
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 28/128 (21%)
Query: 205 FLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYF-FAAKFDGTFYLW 263
++ NG + +S+GP GR+ GTP+ WSP GD F + G F++
Sbjct: 325 YVMPANGGEARRISFGP-GRY---GTPV-----------WSPRGDLVAFTKQNAGRFHIG 369
Query: 264 ETNTWTSEPWSSTSGFV-TGATWDPEGRMILLA-----FAGSLTLGSIHFASKPPSLDAH 317
SE T+ F+ G TW P GR+I+ + G TL S+ + +
Sbjct: 370 VMRLDGSEERLLTASFLDEGPTWSPNGRVIMFSRETQGAQGRATLYSVDITGR------N 423
Query: 318 LLPVDLPD 325
L PV P+
Sbjct: 424 LRPVRTPE 431
>sp|O17468|HIRA_DROME Protein HIRA homolog OS=Drosophila melanogaster GN=Hira PE=1 SV=2
Length = 1047
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 232 IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTW--TSEPWSSTSGFVTGATWDPEG 289
+R G + L WSP Y + D T +W+ + + +G V G +WDP G
Sbjct: 125 LRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKGVSWDPLG 184
Query: 290 RMI 292
R +
Sbjct: 185 RFL 187
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 26/123 (21%)
Query: 200 WTLVDFLRSQNGEQITALSWGPDG------------------RFPGLGTPIRRGFGGLSI 241
W LR +G+ + L+W P+ FP ++ G +
Sbjct: 119 WKCFYTLRGHDGD-VLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVKG 177
Query: 242 LKWSPTGDYFFAAKFDGTFYLWETNTWT-----SEPWSSTSG--FVTGATWDPEGRMILL 294
+ W P G + + D + +W T W+ +EP+ G + +W P+G+ ++
Sbjct: 178 VSWDPLGRFLASQSDDRSIKIWNTMNWSLSHTITEPFEECGGTTHILRLSWSPDGQYLVS 237
Query: 295 AFA 297
A A
Sbjct: 238 AHA 240
>sp|A8IZG4|CIAO1_CHLRE Probable cytosolic iron-sulfur protein assembly protein CIAO1
homolog OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_130093 PE=3 SV=1
Length = 352
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 15/121 (12%)
Query: 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGF---VTGATWDPEGRMILLAFAG 298
+ WSPTG A FD T +WE ++ E + G V W+P+GR+I
Sbjct: 71 VAWSPTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRLIATCGRD 130
Query: 299 SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIY 358
S+ P + + V SQ ++ + W SGE L + G DD
Sbjct: 131 R----SVWIWESMPGREFECVD------VKQGHSQDVKAVTWHPSGELLVSA--GYDDTI 178
Query: 359 K 359
K
Sbjct: 179 K 179
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 80/245 (32%), Gaps = 62/245 (25%)
Query: 104 GVSWHQHKHIVAFISGSTQVIV---RDYEDSGKDAC--ILTSDSQRDVKVLEWRPNGGRS 158
V+W ++A SG V + R S + C IL R ++ + W P G
Sbjct: 21 NVAWSPQGDMLASCSGDKTVRIWSRRQPRPSEQWYCSAILDQCHTRTIRSVAWSPTGRAL 80
Query: 159 LSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALS 218
+ + +W LS G W V L E + ++
Sbjct: 81 ATASFDATVAVWE--------------------LSSGV---WEQVAELEGHENE-VKCVA 116
Query: 219 WGPDGRF----------------PGL---GTPIRRGFG-GLSILKWSPTGDYFFAAKFDG 258
W PDGR PG +++G + + W P+G+ +A +D
Sbjct: 117 WNPDGRLIATCGRDRSVWIWESMPGREFECVDVKQGHSQDVKAVTWHPSGELLVSAGYDD 176
Query: 259 TFYLWETNTWTSEPWSSTSGF----------VTGATWDPEGRMILLAFAGSLTLGSIHFA 308
T LW T+ + W V WDP R L + + LTL
Sbjct: 177 TIKLW---TYDGDEWGCAQTLGGTGTGHESTVWDVCWDPVSRARLASCSDDLTLRLWESR 233
Query: 309 SKPPS 313
+ P S
Sbjct: 234 AAPTS 238
>sp|Q3J041|TOLB_RHOS4 Protein TolB OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1
/ NCIB 8253 / DSM 158) GN=tolB PE=3 SV=1
Length = 444
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 62/160 (38%), Gaps = 32/160 (20%)
Query: 166 GICIWAPSYPGN----AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQI-TALSWG 220
G +AP + + A S+ G + + L G GTR L N I TA S+
Sbjct: 254 GTMTFAPRFAPDGRTVAFSLEQGGNTDIYTLDTGSGTRRQLT------NSPSIETAPSYS 307
Query: 221 PDGR----------------FPGLGTPIRR---GFGGLSILKWSPTGDYF-FAAKFDGTF 260
PDG P G RR G G WSP GD F + G F
Sbjct: 308 PDGSQIVFESDRSGGQQLYIMPAGGGEPRRISNGAGRYGTPVWSPRGDLIAFTKQHQGRF 367
Query: 261 YLWETNTWTSEPWSSTSGFV-TGATWDPEGRMILLAFAGS 299
++ T SE T+ F+ G TW P GR+++ G+
Sbjct: 368 HIGVMRTDGSEERLLTASFLDEGPTWAPNGRVLMFTREGA 407
>sp|A3PM58|TOLB_RHOS1 Protein TolB OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH
2.4.9) GN=tolB PE=3 SV=1
Length = 444
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 62/160 (38%), Gaps = 32/160 (20%)
Query: 166 GICIWAPSYPGN----AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQI-TALSWG 220
G +AP + + A S+ G + + L G GTR L N I TA S+
Sbjct: 254 GTMTFAPRFAPDGRTVAFSLEQGGNTDIYTLDTGSGTRRQLT------NSPSIETAPSYS 307
Query: 221 PDGR----------------FPGLGTPIRR---GFGGLSILKWSPTGDYF-FAAKFDGTF 260
PDG P G RR G G WSP GD F + G F
Sbjct: 308 PDGSQIVFESDRSGGQQLYIMPAGGGEPRRISNGAGRYGTPVWSPRGDLIAFTKQHQGRF 367
Query: 261 YLWETNTWTSEPWSSTSGFV-TGATWDPEGRMILLAFAGS 299
++ T SE T+ F+ G TW P GR+++ G+
Sbjct: 368 HIGVMRTDGSEERLLTASFLDEGPTWAPNGRVLMFTREGA 407
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 95/242 (39%), Gaps = 42/242 (17%)
Query: 143 QRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTL 202
+R + ++ + NG S G + +W N + V+ F G R G W
Sbjct: 172 ERPIAIVRFSNNGNHFASGSWGGQVKVWNSD---NLSEVQL----FRGHTDRVSGLDWYP 224
Query: 203 VDFLRSQNGEQITALSWGPDGRF----PGLGTPIRRGFGGLSIL---KWSPTGDYFFAAK 255
+ + EQ+T + D TP+ R G L+ + + P+GDY +A
Sbjct: 225 LCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSAS 284
Query: 256 FDGTFYLWETNTWTSEPWSS--TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPS 313
FD T+ LW+ +T + G + A P+G L++ G+ +G I S
Sbjct: 285 FDTTWRLWDVHTGVELLMQEGHSEGIFSIAC-QPDGS--LVSSGGNDAIGRIWDLRSGKS 341
Query: 314 ---LDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370
LD H+ + I +AW +G +LA S DD K I+D R+
Sbjct: 342 IMVLDEHI--------------RQIVAMAWSPNGYQLATS--SADDTVK----IWDLRKV 381
Query: 371 PL 372
L
Sbjct: 382 SL 383
>sp|B5X9P2|CIO1A_SALSA Probable cytosolic iron-sulfur protein assembly protein ciao1-A
OS=Salmo salar GN=ciao1a PE=2 SV=1
Length = 330
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 219 WGPDGRFPGLGTPIRRGFG-GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTS 277
WG +G T ++ G + + WSP G+Y +A FD T +W+ E +
Sbjct: 43 WGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLE 102
Query: 278 GF---VTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPD---IVSLTG 331
G V W P G + S+ S+ + VD D VS+
Sbjct: 103 GHENEVKCVAWAPSGNQLAT-------------CSRDKSV--WIWEVDEEDEYECVSVVN 147
Query: 332 S--QGIEKIAWDASGERLA-VSYKGGDDIYKGLIAIYDARRT 370
S Q ++ + W + E LA SY +YK ++ R T
Sbjct: 148 SHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRAT 189
>sp|Q6IA86|ELP2_HUMAN Elongator complex protein 2 OS=Homo sapiens GN=ELP2 PE=1 SV=2
Length = 826
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
Query: 215 TALSWGPDGRFPGLGTPIRRGFGGLSIL-----KWSPTGDYFFAAKFDGTFYLWETNTWT 269
T + W PD +R G G + L +++ G A F G +LW+ NT
Sbjct: 315 TMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFNEDGSMIIAHAFHGALHLWKQNTVN 374
Query: 270 SEPWS---STSGFVTGA---TWDPEGRMIL 293
W+ SG G WDPEG I+
Sbjct: 375 PREWTPEIVISGHFDGVQDLVWDPEGEFII 404
>sp|P97452|BOP1_MOUSE Ribosome biogenesis protein BOP1 OS=Mus musculus GN=Bop1 PE=1 SV=1
Length = 732
Score = 35.8 bits (81), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 225 FPGLGTPIRRGFGGL-SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGA 283
FP + RG L L SP G + + DGT LWE T G V
Sbjct: 387 FPVCQALVYRGHSDLVRCLSVSPGGQWLASGSDDGTLKLWEVATARCMKTVHVGGVVRSI 446
Query: 284 TWDPEGRMILLAFA 297
W+P + L+A A
Sbjct: 447 AWNPNPTICLVAAA 460
>sp|A4WQ04|TOLB_RHOS5 Protein TolB OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH
2.4.3) GN=tolB PE=3 SV=1
Length = 444
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 32/212 (15%)
Query: 114 VAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 173
V +++ S+ +++ D + TS S ++ + S+ + G +AP
Sbjct: 202 VQYLTDSSSIVLAPRFSPTGDRILFTSYSTGFPRIYLMDVGSLATRSLAEQPGTMTFAPR 261
Query: 174 YPGN----AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQI-TALSWGPDGR---- 224
+ + A S+ G + + L GTR L N I TA S+ PDG
Sbjct: 262 FAPDGRTVAFSLEQGGNTDIYTLDTASGTRRQLT------NSPSIETAPSYSPDGSQIVF 315
Query: 225 ------------FPGLGTPIRR---GFGGLSILKWSPTGDYF-FAAKFDGTFYLWETNTW 268
P G RR G G WSP GD F + G F++ T
Sbjct: 316 ESDRSGGQQLYIMPAGGGEPRRISNGAGRYGTPVWSPRGDLIAFTKQHQGRFHIGVMRTD 375
Query: 269 TSEPWSSTSGFV-TGATWDPEGRMILLAFAGS 299
SE T+ F+ G TW P GR+++ G+
Sbjct: 376 GSEERLLTASFLDEGPTWAPNGRVLMFTREGA 407
>sp|Q562C2|BOP1_RAT Ribosome biogenesis protein BOP1 OS=Rattus norvegicus GN=Bop1 PE=2
SV=1
Length = 731
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 225 FPGLGTPIRRGFGGL-SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGA 283
FP + RG L L SP G + + DGT LWE T G +
Sbjct: 386 FPVCQALVYRGHSDLVRCLSVSPGGQWLASGSDDGTLRLWEVATARCMKTVRVGGVIRSI 445
Query: 284 TWDPEGRMILLAFA 297
W+P + L+A A
Sbjct: 446 AWNPNPTICLVAAA 459
>sp|A0JMQ0|BOP1_DANRE Ribosome biogenesis protein bop1 OS=Danio rerio GN=bop1 PE=2 SV=1
Length = 777
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 225 FPGLGTPIRRGFGGL-SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGA 283
FP + + RG L + SP+G + + D T WE +T G V G
Sbjct: 431 FPTTQSLVYRGHSSLVRSISVSPSGQWLVSGSDDCTVRFWEVSTARCLKTVQVGGAVKGV 490
Query: 284 TWDPEGRMILLAFA 297
W+P + L+A +
Sbjct: 491 AWNPNPSICLVAVS 504
>sp|B5X212|CIO1B_SALSA Probable cytosolic iron-sulfur protein assembly protein ciao1-B
OS=Salmo salar GN=ciao1b PE=2 SV=1
Length = 333
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 19/159 (11%)
Query: 219 WGPDGRFPGLGTPIRRGFG-GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTS 277
WG +G T ++ G + + WSP G+Y +A FD T +W+ E +
Sbjct: 43 WGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLE 102
Query: 278 GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLP---DIVSLTGS-- 332
G E + +A+A S L A+ + VD + VS+ S
Sbjct: 103 GH--------ENEVKCVAWAPSGNL----LATCSRDKSVWIWEVDEENEYECVSVVNSHT 150
Query: 333 QGIEKIAWDASGERLA-VSYKGGDDIYKGLIAIYDARRT 370
Q ++ + W + E LA SY +YK ++ R T
Sbjct: 151 QDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRAT 189
>sp|B0WC36|BOP1_CULQU Ribosome biogenesis protein BOP1 homolog OS=Culex quinquefasciatus
GN=CPIJ004506 PE=3 SV=1
Length = 861
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 225 FPGLGTPIRRGFGGL-SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGA 283
FP L + RG + + P G+Y D T +WE +T T V
Sbjct: 512 FPTLQNLVYRGHTDMIRTISIEPKGEYLVTGSDDKTIKIWEVSTARCIKTIPTGDVVRSV 571
Query: 284 TWDPEGRMILLAFA-GSLTL 302
W P ++ L+A A G TL
Sbjct: 572 AWCPNVKISLIAVASGKRTL 591
>sp|Q652L2|HIRA_ORYSJ Protein HIRA OS=Oryza sativa subsp. japonica GN=Os09g0567700 PE=2
SV=1
Length = 975
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 25/117 (21%)
Query: 200 WTLVDFLRSQNGEQITALSWGPD----------------GRFPGLGTPIRRGFGGLSI-L 242
W +V LR + + L+W PD G+ T + RG L +
Sbjct: 115 WKVVMTLRGHTAD-VVDLNWSPDDSTLASGSLDNTVHIWSMANGICTAVLRGHSSLVKGV 173
Query: 243 KWSPTGDYFFAAKFDGTFYLWETNTW-----TSEPWSSTSG--FVTGATWDPEGRMI 292
W P G + + D T +W T+ W T WS + G F W P G I
Sbjct: 174 TWDPIGSFIASQSDDKTVIIWRTSDWSLAHRTEGHWSKSLGSTFFRRLAWSPCGHFI 230
>sp|Q14137|BOP1_HUMAN Ribosome biogenesis protein BOP1 OS=Homo sapiens GN=BOP1 PE=1 SV=2
Length = 746
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 225 FPGLGTPIRRGFGGL-SILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGA 283
FP + RG L L SP G + + DG+ LWE T G V
Sbjct: 401 FPTCQALVYRGHSDLVRCLSVSPGGQWLVSGSDDGSLRLWEVATARCVRTVPVGGVVKSV 460
Query: 284 TWDPEGRMILLAFA 297
W+P + L+A A
Sbjct: 461 AWNPSPAVCLVAAA 474
>sp|Q9BQ87|TBL1Y_HUMAN F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens
GN=TBL1Y PE=2 SV=1
Length = 522
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 23/124 (18%)
Query: 167 ICIWAPSYPGNAASVRSGAASF--LGALSRGPGTRWTLVDFLRS-----QNGEQITALSW 219
IC W P A+ A L S G T+ L +R + + +T+L W
Sbjct: 184 ICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDW 243
Query: 220 GPDGRFPGLGT----------------PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLW 263
DG +G+ + + G + LKW+ G+Y +A D T +W
Sbjct: 244 NSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIW 303
Query: 264 ETNT 267
+ +T
Sbjct: 304 DAHT 307
>sp|Q920I9|WDR7_MOUSE WD repeat-containing protein 7 OS=Mus musculus GN=Wdr7 PE=1 SV=3
Length = 1489
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 234 RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT 267
R + ++KW P+ DY DG+ Y+W+ +T
Sbjct: 558 RHLFPIQVIKWRPSDDYLVVGCTDGSVYVWQMDT 591
>sp|P38262|SIF2_YEAST SIR4-interacting protein SIF2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SIF2 PE=1 SV=2
Length = 535
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 213 QITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP 272
QIT + P G+ G PI S+L+++ T +A DGT +W S+
Sbjct: 345 QITEKT--PTGKLIGHHGPI-------SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN 395
Query: 273 -WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 331
+ S + A+W + ++I + GS+ L S+ + LL + + D V +
Sbjct: 396 CFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNT--------LLALSIVDGVPIFA 447
Query: 332 SQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPV 391
+I+ D G++ AV++ G + +YD ++ S SL G G NP P+
Sbjct: 448 G----RISQD--GQKYAVAFMDGQ------VNVYDLKKLNSKSRSLYGNRDGIL-NPLPI 494
>sp|Q2URB7|EIF3B_ASPOR Eukaryotic translation initiation factor 3 subunit B OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prt1 PE=3 SV=1
Length = 741
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 60/165 (36%), Gaps = 25/165 (15%)
Query: 133 KDACILTSDSQRDVKV-LEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGA 191
K + DS +D + W PNGGR + I P AA + + SF
Sbjct: 447 KGVPVEVVDSLKDTVINFAWEPNGGRF--------VLITTGEAPSGAAVLPKTSVSFFAP 498
Query: 192 LSRGPGT-RWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDY 250
+GP + LV R+ + A+ W P GRF + T + L
Sbjct: 499 EKKGPQAGNFKLV---RTIEKKTSNAIYWSPKGRFVVVATVHSQSNFDLD---------- 545
Query: 251 FFAAKFDGTFYLWETNTWTSEPWSSTSGF--VTGATWDPEGRMIL 293
F+ F+G E + + T VT WDP GR ++
Sbjct: 546 FWDMDFEGEKAEGEKDLAANLQLMKTVEHYGVTDIDWDPTGRYVV 590
>sp|Q32PJ6|CIAO1_BOVIN Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Bos taurus GN=CIAO1 PE=2 SV=1
Length = 339
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGF---VTGATWDPEGRMILLAFAG 298
+ WSP G+Y +A FD T +W+ N E ++ G V W P G ++
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLL------ 120
Query: 299 SLTLGSIHFASKPPSLDAHLLPVDLPD---IVSLTGS--QGIEKIAWDASGERLA-VSYK 352
A+ + VD D VS+ S Q ++ + W S E LA SY
Sbjct: 121 ---------ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171
Query: 353 GGDDIYK 359
+Y+
Sbjct: 172 DTVKLYR 178
>sp|O76071|CIAO1_HUMAN Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Homo sapiens GN=CIAO1 PE=1 SV=1
Length = 339
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGF---VTGATWDPEGRMILLAFAG 298
+ WSP G+Y +A FD T +W+ N E ++ G V W P G ++
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL------ 120
Query: 299 SLTLGSIHFASKPPSLDAHLLPVDLPD---IVSLTGS--QGIEKIAWDASGERLA-VSYK 352
A+ + VD D VS+ S Q ++ + W S E LA SY
Sbjct: 121 ---------ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171
Query: 353 GGDDIYK 359
+Y+
Sbjct: 172 DTVKLYR 178
>sp|A9WWH3|TOLB_BRUSI Protein TolB OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=tolB PE=3 SV=1
Length = 443
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 220 GPDGRFPGLGTPIRRGFGGLSILKWSPTGDYF-FAAKFDGTFYLWETNTWTSEPWSSTSG 278
G DG P I G G S WSP GD F + G F + T T S TSG
Sbjct: 329 GADGSNP---RRISMGDGSYSTPVWSPRGDLIAFTKQSQGQFSIGVTKTDGSGERLLTSG 385
Query: 279 FVT-GATWDPEGRMILL 294
F G TW P GR+++
Sbjct: 386 FHNEGPTWAPNGRVLMF 402
>sp|Q9Y4E6|WDR7_HUMAN WD repeat-containing protein 7 OS=Homo sapiens GN=WDR7 PE=1 SV=2
Length = 1490
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 234 RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT 267
R + ++KW P+ DY DG+ Y+W+ +T
Sbjct: 558 RHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDT 591
>sp|Q4P4R3|HIR1_USTMA Protein HIR1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=HIR1
PE=3 SV=1
Length = 1017
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 244 WSPTGDYFFAAKFDGTFYLWETNTW-----TSEPW--SSTSGFVTGATWDPEGRMILLAF 296
+ P G Y A D T +W T+ W ++P+ S ++ F +W P+G ++L A
Sbjct: 183 FDPLGQYLATASDDKTVKVWRTSDWGLERSITDPFLTSPSTAFFRRPSWSPDGSLLLCAN 242
Query: 297 AGS 299
A S
Sbjct: 243 AMS 245
>sp|Q8WXG9|GPR98_HUMAN G-protein coupled receptor 98 OS=Homo sapiens GN=GPR98 PE=1 SV=2
Length = 6306
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 37/143 (25%)
Query: 251 FFAAKFDGTF----YLWETNTW--TSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGS 304
FF + GTF WE ++ +E + STSGF T A + E
Sbjct: 4668 FFVRRVKGTFGEIMVYWELSSEFDITEDFLSTSGFFTIADGESEA--------------- 4712
Query: 305 IHFASKPPSLDAHLLPVDLPDI-----VSLTGSQGIEKIAWDASGERLAVSYKGGDDIYK 359
S D HLLP ++P+I + L +G ++ + S +V +D
Sbjct: 4713 --------SFDVHLLPDEVPEIEEDYVIQLVSVEGGAELDLEKSITWFSVY---ANDDPH 4761
Query: 360 GLIAIYDARRTPLISLSLIGFIR 382
G+ A+Y R++ LI +LI I+
Sbjct: 4762 GVFALYSDRQSILIGQNLIRSIQ 4784
>sp|Q99KN2|CIAO1_MOUSE Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Mus musculus GN=Ciao1 PE=2 SV=1
Length = 339
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGF---VTGATWDPEGRMI 292
+ WSP G+Y +A FD T +W+ N E ++ G V W P G ++
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL 120
>sp|Q5M7T1|CIAO1_RAT Probable cytosolic iron-sulfur protein assembly protein CIAO1
OS=Rattus norvegicus GN=Ciao1 PE=2 SV=1
Length = 339
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGF---VTGATWDPEGRMILLAFAG 298
+ WSP G+Y +A FD T +W+ N E ++ G V W P G ++
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL------ 120
Query: 299 SLTLGSIHFASKPPSLDAHLLPVDLPD---IVSLTGS--QGIEKIAWDASGERLA-VSYK 352
A+ + VD D VS+ S Q ++ + W S E LA SY
Sbjct: 121 ---------ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171
Query: 353 GGDDIYK 359
+Y+
Sbjct: 172 DTVKLYQ 178
>sp|Q9QXE7|TBL1X_MOUSE F-box-like/WD repeat-containing protein TBL1X OS=Mus musculus
GN=Tbl1x PE=2 SV=2
Length = 527
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 23/124 (18%)
Query: 167 ICIWAPSYPGNAASVRSGAASF--LGALSRGPGTRWTLVDFLRS-----QNGEQITALSW 219
IC W P A+ A L S G T+ L +R + + +T+L W
Sbjct: 187 ICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDW 246
Query: 220 GPDGRF----------------PGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLW 263
DG L + + + G + LKW+ G+Y +A D T +W
Sbjct: 247 NSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIW 306
Query: 264 ETNT 267
+ +T
Sbjct: 307 DAHT 310
>sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2
SV=2
Length = 614
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTS----GFVTGATWDPEGRMIL 293
G+S L WSP +Y A D LW N T E + S +T W+P+G+ +
Sbjct: 356 GVSYLAWSPDDNYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFV 415
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 8/100 (8%)
Query: 219 WGPDGRF-PGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTS 277
W DG G P FG + W P G+ A DGT LW S
Sbjct: 711 WDLDGNLIRQFGLPEVAFFG----VNWHPNGNLLAVAADDGTVRLWTPQGEIKATLSGHD 766
Query: 278 GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAH 317
FVT + P+G+ + F+ S IH+++ L +
Sbjct: 767 EFVTRVVFTPDGKQL---FSSSSNGSVIHWSTSGKMLKKY 803
>sp|Q95RJ9|EBI_DROME F-box-like/WD repeat-containing protein ebi OS=Drosophila
melanogaster GN=ebi PE=1 SV=2
Length = 700
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 219 WGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNT 267
W DGR L + + + G + LKW+ G+Y +A D T +W+ +T
Sbjct: 437 WKTDGR---LASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDAST 482
>sp|Q2TZG4|PFS2_ASPOR Polyadenylation factor subunit 2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pfs2 PE=3 SV=1
Length = 610
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 13/146 (8%)
Query: 142 SQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGT-RW 200
S++ + V+ W P G R L+ G G +W G A + + + L G + W
Sbjct: 97 SKKPITVVRWTPEGRRLLTGGHTGEFMLWN----GTAFNFETVMDAHYDQLQAGVTSLAW 152
Query: 201 TLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTF 260
+ G++ W P+ F + T + L WSP+ F +A D T
Sbjct: 153 SHSHDWLISGGQKGDIKYWRPN--FNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTL 210
Query: 261 YLWETNTWTSEPWSSTSGFVTGATWD 286
+++ + T++ +TG WD
Sbjct: 211 KIFDFTSRTAD------TVLTGHNWD 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,821,661
Number of Sequences: 539616
Number of extensions: 8528742
Number of successful extensions: 19819
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 19434
Number of HSP's gapped (non-prelim): 455
length of query: 427
length of database: 191,569,459
effective HSP length: 120
effective length of query: 307
effective length of database: 126,815,539
effective search space: 38932370473
effective search space used: 38932370473
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)