Query 014302
Match_columns 427
No_of_seqs 425 out of 3301
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 09:08:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014302.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014302hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.2E-33 3.9E-38 260.6 29.7 266 101-421 34-321 (321)
2 1vyh_C Platelet-activating fac 100.0 4.6E-33 1.6E-37 265.5 29.2 266 97-419 104-409 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 3.8E-32 1.3E-36 252.6 31.9 271 97-418 51-340 (340)
4 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.5E-32 1.5E-36 252.6 29.3 289 101-423 18-337 (345)
5 2ynn_A Coatomer subunit beta'; 100.0 1E-31 3.6E-36 245.6 30.4 257 101-415 15-297 (304)
6 4g56_B MGC81050 protein; prote 100.0 2.2E-32 7.4E-37 255.9 25.7 270 100-421 43-343 (357)
7 4gqb_B Methylosome protein 50; 100.0 6.2E-32 2.1E-36 251.2 27.1 267 100-420 31-330 (344)
8 1nr0_A Actin interacting prote 100.0 3.4E-31 1.2E-35 265.5 31.5 242 97-373 55-359 (611)
9 2pbi_B Guanine nucleotide-bind 100.0 7.4E-31 2.5E-35 245.2 30.5 273 97-418 60-354 (354)
10 1nr0_A Actin interacting prote 100.0 1E-30 3.5E-35 262.0 32.3 276 100-420 19-354 (611)
11 3frx_A Guanine nucleotide-bind 100.0 1.6E-30 5.6E-35 239.4 30.6 272 98-420 14-316 (319)
12 2xzm_R RACK1; ribosome, transl 100.0 3.4E-30 1.2E-34 239.7 32.2 271 101-420 23-339 (343)
13 4ery_A WD repeat-containing pr 100.0 7.3E-30 2.5E-34 234.1 31.6 263 101-419 25-310 (312)
14 3iz6_a 40S ribosomal protein R 100.0 1.9E-30 6.4E-35 244.9 28.3 284 96-420 61-374 (380)
15 1gxr_A ESG1, transducin-like e 100.0 9.8E-30 3.4E-34 235.0 31.1 265 101-421 53-337 (337)
16 1erj_A Transcriptional repress 100.0 1.4E-29 4.9E-34 240.0 32.4 275 101-419 66-387 (393)
17 2hes_X YDR267CP; beta-propelle 100.0 1.9E-29 6.6E-34 233.3 29.6 280 101-419 16-326 (330)
18 2pm7_B Protein transport prote 100.0 5.2E-29 1.8E-33 226.9 31.0 252 101-423 11-287 (297)
19 3ei3_B DNA damage-binding prot 100.0 6.3E-29 2.1E-33 234.6 30.8 276 101-419 75-380 (383)
20 2ymu_A WD-40 repeat protein; u 100.0 4.4E-29 1.5E-33 248.4 30.3 285 97-419 12-373 (577)
21 4e54_B DNA damage-binding prot 100.0 3.3E-29 1.1E-33 240.8 27.2 274 101-420 121-429 (435)
22 3zwl_B Eukaryotic translation 100.0 3.9E-28 1.3E-32 227.1 33.7 266 101-419 34-344 (369)
23 3ow8_A WD repeat-containing pr 100.0 2E-29 6.8E-34 232.2 24.0 220 101-368 82-320 (321)
24 4aow_A Guanine nucleotide-bind 100.0 3.2E-28 1.1E-32 225.4 32.2 273 97-419 34-335 (340)
25 4gqb_B Methylosome protein 50; 100.0 3.3E-29 1.1E-33 232.7 25.3 227 101-373 84-335 (344)
26 2ymu_A WD-40 repeat protein; u 100.0 1E-28 3.4E-33 245.8 30.5 256 101-418 305-577 (577)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.3E-29 2.5E-33 230.9 26.5 240 101-373 63-339 (345)
28 3dm0_A Maltose-binding peripla 100.0 2.1E-28 7E-33 249.1 32.0 273 97-419 378-691 (694)
29 3dw8_B Serine/threonine-protei 100.0 4.3E-28 1.5E-32 233.4 32.3 306 99-418 28-443 (447)
30 1vyh_C Platelet-activating fac 100.0 5.5E-29 1.9E-33 237.3 23.8 221 101-368 152-410 (410)
31 3bg1_A Protein SEC13 homolog; 100.0 1.4E-28 4.8E-33 226.1 25.0 252 101-423 15-295 (316)
32 1k8k_C P40, ARP2/3 complex 41 100.0 3.9E-28 1.3E-32 227.7 27.9 275 99-420 8-360 (372)
33 2xzm_R RACK1; ribosome, transl 100.0 7.3E-28 2.5E-32 224.0 27.6 236 101-370 78-341 (343)
34 3frx_A Guanine nucleotide-bind 100.0 2.7E-28 9.2E-33 224.5 24.0 227 101-370 67-318 (319)
35 1got_B GT-beta; complex (GTP-b 100.0 4.3E-28 1.5E-32 225.2 25.0 220 101-366 99-340 (340)
36 3dwl_C Actin-related protein 2 100.0 1.1E-28 3.8E-33 232.2 20.8 230 99-368 11-280 (377)
37 2pm9_A Protein WEB1, protein t 100.0 6.2E-28 2.1E-32 229.9 26.0 272 101-421 14-337 (416)
38 1r5m_A SIR4-interacting protei 100.0 1.1E-27 3.7E-32 228.4 27.2 268 101-419 110-423 (425)
39 3jrp_A Fusion protein of prote 100.0 2.2E-27 7.6E-32 222.8 28.3 251 101-420 13-286 (379)
40 1sq9_A Antiviral protein SKI8; 100.0 2.9E-27 9.9E-32 223.9 28.5 289 101-419 18-393 (397)
41 2pm9_A Protein WEB1, protein t 100.0 1E-27 3.5E-32 228.4 22.4 282 100-420 68-413 (416)
42 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-26 8.7E-31 212.6 30.2 265 95-423 5-339 (351)
43 4g56_B MGC81050 protein; prote 100.0 2.4E-27 8.3E-32 221.6 23.4 223 101-370 96-344 (357)
44 4gga_A P55CDC, cell division c 100.0 6.8E-26 2.3E-30 216.6 33.9 267 96-420 102-394 (420)
45 4aez_A CDC20, WD repeat-contai 100.0 1.7E-26 5.7E-31 219.5 29.4 264 101-420 95-379 (401)
46 3i2n_A WD repeat-containing pr 100.0 6.4E-27 2.2E-31 218.0 25.8 275 101-420 20-352 (357)
47 4h5i_A Guanine nucleotide-exch 100.0 2.5E-27 8.7E-32 222.1 22.6 276 100-420 15-342 (365)
48 3vl1_A 26S proteasome regulato 100.0 1.7E-27 5.8E-32 227.4 21.4 265 101-421 58-365 (420)
49 1gxr_A ESG1, transducin-like e 100.0 1E-26 3.6E-31 214.6 25.5 264 101-420 11-295 (337)
50 3vl1_A 26S proteasome regulato 100.0 2.8E-26 9.7E-31 218.9 29.1 273 98-419 95-417 (420)
51 1erj_A Transcriptional repress 100.0 1E-26 3.6E-31 220.3 25.2 221 101-369 125-389 (393)
52 4ggc_A P55CDC, cell division c 100.0 1.1E-25 3.7E-30 206.3 31.3 263 101-420 27-314 (318)
53 3k26_A Polycomb protein EED; W 100.0 1E-26 3.4E-31 217.3 24.4 280 101-419 20-364 (366)
54 3gre_A Serine/threonine-protei 100.0 3.8E-27 1.3E-31 226.4 22.0 293 101-418 65-437 (437)
55 1r5m_A SIR4-interacting protei 100.0 2.3E-26 7.8E-31 219.2 27.0 262 101-420 47-360 (425)
56 2pbi_B Guanine nucleotide-bind 100.0 1.2E-26 4.2E-31 216.6 24.2 221 101-366 108-354 (354)
57 3odt_A Protein DOA1; ubiquitin 100.0 3.3E-26 1.1E-30 209.1 26.2 259 101-420 20-295 (313)
58 3mkq_A Coatomer beta'-subunit; 100.0 3.7E-26 1.3E-30 236.5 29.6 262 101-419 15-300 (814)
59 2hes_X YDR267CP; beta-propelle 100.0 1.7E-26 5.7E-31 213.6 23.6 230 101-369 60-328 (330)
60 2ynn_A Coatomer subunit beta'; 100.0 7.1E-26 2.4E-30 206.8 27.3 231 135-419 5-257 (304)
61 2aq5_A Coronin-1A; WD40 repeat 99.9 1.3E-25 4.6E-30 213.2 28.3 251 96-419 76-340 (402)
62 2j04_B YDR362CP, TAU91; beta p 99.9 7E-26 2.4E-30 221.1 25.4 274 101-425 209-521 (524)
63 4h5i_A Guanine nucleotide-exch 99.9 6.1E-26 2.1E-30 212.7 22.9 196 101-370 135-344 (365)
64 3dm0_A Maltose-binding peripla 99.9 1.1E-25 3.6E-30 229.1 26.1 235 101-368 432-692 (694)
65 3jro_A Fusion protein of prote 99.9 9.6E-26 3.3E-30 231.0 25.8 256 97-421 5-285 (753)
66 3sfz_A APAF-1, apoptotic pepti 99.9 3.4E-25 1.1E-29 239.6 30.1 262 101-419 617-911 (1249)
67 2j04_A TAU60, YPL007P, hypothe 99.9 4.8E-26 1.6E-30 217.9 20.0 245 100-419 16-295 (588)
68 1yfq_A Cell cycle arrest prote 99.9 7.9E-25 2.7E-29 202.8 27.7 240 101-420 13-281 (342)
69 1pgu_A Actin interacting prote 99.9 7.4E-25 2.5E-29 219.2 29.2 273 100-420 19-327 (615)
70 3iz6_a 40S ribosomal protein R 99.9 8.6E-26 2.9E-30 213.0 20.6 239 135-420 58-328 (380)
71 4a11_B DNA excision repair pro 99.9 4.2E-24 1.4E-28 202.5 32.2 258 101-421 45-365 (408)
72 2xyi_A Probable histone-bindin 99.9 9.5E-25 3.2E-29 209.3 27.3 253 101-419 130-408 (430)
73 3zwl_B Eukaryotic translation 99.9 7.8E-25 2.7E-29 204.6 25.0 236 101-371 76-348 (369)
74 4aez_A CDC20, WD repeat-contai 99.9 9.6E-25 3.3E-29 207.3 25.5 228 101-373 136-384 (401)
75 4aow_A Guanine nucleotide-bind 99.9 4.2E-24 1.4E-28 197.6 28.2 231 101-371 88-339 (340)
76 1k8k_C P40, ARP2/3 complex 41 99.9 8.5E-25 2.9E-29 204.9 23.8 241 101-371 54-363 (372)
77 2pm7_B Protein transport prote 99.9 2.6E-24 8.9E-29 195.8 26.2 219 101-369 55-285 (297)
78 4ery_A WD repeat-containing pr 99.9 3.8E-24 1.3E-28 195.9 27.5 235 135-420 15-267 (312)
79 2j04_B YDR362CP, TAU91; beta p 99.9 5.4E-25 1.9E-29 214.8 22.5 250 100-419 134-426 (524)
80 3i2n_A WD repeat-containing pr 99.9 9.6E-25 3.3E-29 203.2 23.1 243 101-371 67-355 (357)
81 3k26_A Polycomb protein EED; W 99.9 4.4E-25 1.5E-29 206.1 20.4 222 100-368 70-365 (366)
82 3mmy_A MRNA export factor; mRN 99.9 2.8E-24 9.6E-29 200.7 24.9 279 96-420 34-345 (368)
83 4gga_A P55CDC, cell division c 99.9 1.3E-24 4.5E-29 207.7 22.9 221 101-371 149-397 (420)
84 3sfz_A APAF-1, apoptotic pepti 99.9 1.1E-24 3.7E-29 235.6 24.9 269 100-419 962-1247(1249)
85 3dwl_C Actin-related protein 2 99.9 5.4E-25 1.8E-29 207.0 19.7 184 101-308 57-280 (377)
86 3v7d_B Cell division control p 99.9 8.7E-24 3E-28 204.5 28.5 253 102-420 125-420 (464)
87 2aq5_A Coronin-1A; WD40 repeat 99.9 9E-24 3.1E-28 200.6 27.7 250 101-420 36-298 (402)
88 2oaj_A Protein SNI1; WD40 repe 99.9 2.9E-24 1E-28 223.4 25.8 305 101-419 213-659 (902)
89 3mkq_A Coatomer beta'-subunit; 99.9 1E-23 3.5E-28 218.2 29.5 269 100-419 56-384 (814)
90 1sq9_A Antiviral protein SKI8; 99.9 1.5E-24 5.2E-29 205.2 20.8 248 101-370 64-396 (397)
91 2oaj_A Protein SNI1; WD40 repe 99.9 9.2E-24 3.1E-28 219.7 27.0 255 101-419 19-310 (902)
92 1pgu_A Actin interacting prote 99.9 5.4E-24 1.8E-28 213.0 24.2 226 101-373 65-332 (615)
93 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.8E-23 1.3E-27 199.4 28.9 250 100-419 5-337 (450)
94 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.6E-23 1.6E-27 198.8 29.3 258 101-422 104-392 (450)
95 3vu4_A KMHSV2; beta-propeller 99.9 3.1E-23 1.1E-27 193.6 26.4 265 101-422 21-337 (355)
96 3bws_A Protein LP49; two-domai 99.9 5.9E-23 2E-27 196.7 28.7 263 101-419 124-430 (433)
97 3bg1_A Protein SEC13 homolog; 99.9 4.2E-24 1.4E-28 196.2 19.6 221 101-369 59-293 (316)
98 3lrv_A PRE-mRNA-splicing facto 99.9 7.1E-24 2.4E-28 197.0 20.8 237 105-419 42-290 (343)
99 3ei3_B DNA damage-binding prot 99.9 1.8E-23 6.1E-28 197.1 21.8 222 101-369 120-382 (383)
100 3lrv_A PRE-mRNA-splicing facto 99.9 9.9E-23 3.4E-27 189.2 25.6 235 100-417 77-329 (343)
101 4gq1_A NUP37; propeller, trans 99.9 1.1E-23 3.6E-28 199.6 19.3 226 96-368 131-388 (393)
102 3v7d_B Cell division control p 99.9 1.5E-22 5.2E-27 195.7 27.3 278 101-419 164-461 (464)
103 4e54_B DNA damage-binding prot 99.9 3.6E-23 1.2E-27 198.7 21.8 195 140-373 116-331 (435)
104 2j04_A TAU60, YPL007P, hypothe 99.9 9.5E-23 3.2E-27 195.2 24.2 233 100-410 86-350 (588)
105 3odt_A Protein DOA1; ubiquitin 99.9 9.1E-23 3.1E-27 186.2 23.1 222 100-373 60-300 (313)
106 1p22_A F-BOX/WD-repeat protein 99.9 2.4E-22 8.4E-27 192.8 26.5 255 101-421 135-414 (435)
107 3dw8_B Serine/threonine-protei 99.9 1.8E-22 6E-27 194.1 25.4 233 101-368 95-445 (447)
108 3jrp_A Fusion protein of prote 99.9 2.6E-22 8.9E-27 188.2 26.0 208 101-371 57-289 (379)
109 1l0q_A Surface layer protein; 99.9 1.5E-21 5E-26 184.4 30.9 252 112-420 3-274 (391)
110 4gq1_A NUP37; propeller, trans 99.9 2.4E-22 8.3E-27 190.2 24.2 250 101-419 91-387 (393)
111 1yfq_A Cell cycle arrest prote 99.9 6.9E-22 2.4E-26 182.9 26.3 238 101-413 58-315 (342)
112 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.8E-21 6E-26 187.4 29.2 258 101-421 161-442 (445)
113 2xyi_A Probable histone-bindin 99.9 7.8E-22 2.7E-26 189.0 24.8 216 101-370 183-411 (430)
114 4ggc_A P55CDC, cell division c 99.9 8.7E-22 3E-26 180.2 23.2 219 101-369 69-315 (318)
115 4a11_B DNA excision repair pro 99.9 8.9E-22 3E-26 186.4 23.8 261 100-420 100-404 (408)
116 1l0q_A Surface layer protein; 99.9 5.9E-21 2E-25 180.2 28.8 228 101-376 33-282 (391)
117 3f3f_A Nucleoporin SEH1; struc 99.9 1.3E-21 4.3E-26 180.9 23.4 228 101-373 59-341 (351)
118 2w18_A PALB2, fancn, partner a 99.9 4.8E-21 1.6E-25 172.6 26.1 263 101-419 41-355 (356)
119 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.8E-21 1.6E-25 184.3 27.9 250 102-420 122-390 (445)
120 3gre_A Serine/threonine-protei 99.9 2.9E-22 1E-26 192.2 18.9 264 106-420 34-358 (437)
121 3bws_A Protein LP49; two-domai 99.9 1.1E-20 3.7E-25 180.9 25.5 222 101-369 171-432 (433)
122 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.2E-20 2.1E-24 174.8 29.9 226 111-419 143-385 (415)
123 3jro_A Fusion protein of prote 99.9 4.8E-21 1.6E-25 196.3 22.8 219 101-369 55-285 (753)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.1E-19 7.3E-24 171.1 29.5 219 101-399 180-409 (415)
125 2w18_A PALB2, fancn, partner a 99.9 1.3E-20 4.5E-25 169.8 18.5 203 101-367 113-355 (356)
126 1ri6_A Putative isomerase YBHE 99.9 7.6E-19 2.6E-23 162.3 29.0 254 101-420 39-307 (343)
127 3mmy_A MRNA export factor; mRN 99.9 2.1E-20 7.1E-25 174.3 18.3 227 101-373 88-353 (368)
128 3vu4_A KMHSV2; beta-propeller 99.8 1.9E-19 6.4E-24 167.9 24.4 249 101-370 60-337 (355)
129 2ojh_A Uncharacterized protein 99.8 4.6E-19 1.6E-23 159.8 25.6 248 117-411 18-292 (297)
130 1p22_A F-BOX/WD-repeat protein 99.8 9.3E-20 3.2E-24 174.8 21.5 226 101-373 175-418 (435)
131 2ecf_A Dipeptidyl peptidase IV 99.8 9.1E-19 3.1E-23 179.3 27.4 251 99-420 36-366 (741)
132 3u4y_A Uncharacterized protein 99.8 5E-18 1.7E-22 156.3 29.3 268 106-419 4-302 (331)
133 3hfq_A Uncharacterized protein 99.8 6.4E-18 2.2E-22 156.8 28.6 265 101-420 41-316 (347)
134 1xfd_A DIP, dipeptidyl aminope 99.8 8.3E-19 2.8E-23 179.1 23.2 274 101-423 18-395 (723)
135 1nir_A Nitrite reductase; hemo 99.8 1.1E-18 3.8E-23 171.5 22.7 281 100-419 179-512 (543)
136 3o4h_A Acylamino-acid-releasin 99.8 5.3E-19 1.8E-23 176.0 20.3 252 101-412 23-303 (582)
137 3vgz_A Uncharacterized protein 99.8 2.3E-17 7.8E-22 153.1 27.1 253 101-411 42-334 (353)
138 2ojh_A Uncharacterized protein 99.8 8.1E-18 2.8E-22 151.6 21.7 213 101-352 43-291 (297)
139 3u4y_A Uncharacterized protein 99.8 1.9E-17 6.7E-22 152.3 24.5 233 101-372 42-307 (331)
140 2oit_A Nucleoporin 214KDA; NH2 99.8 1.2E-17 4.1E-22 159.7 23.5 223 98-370 35-279 (434)
141 2ecf_A Dipeptidyl peptidase IV 99.8 1.6E-17 5.6E-22 170.0 25.1 275 101-418 110-456 (741)
142 2z3z_A Dipeptidyl aminopeptida 99.8 2.5E-17 8.6E-22 167.7 26.1 276 100-419 82-433 (706)
143 1ri6_A Putative isomerase YBHE 99.8 5.1E-17 1.7E-21 149.9 24.4 245 113-420 7-261 (343)
144 2oit_A Nucleoporin 214KDA; NH2 99.8 8.2E-17 2.8E-21 153.9 26.2 260 101-421 94-405 (434)
145 1nir_A Nitrite reductase; hemo 99.8 1.1E-16 3.9E-21 157.1 27.1 236 106-419 144-400 (543)
146 3scy_A Hypothetical bacterial 99.8 1.3E-15 4.4E-20 142.1 32.5 260 101-420 51-336 (361)
147 2z3z_A Dipeptidyl aminopeptida 99.8 3.2E-17 1.1E-21 166.9 23.4 228 101-371 122-437 (706)
148 1xfd_A DIP, dipeptidyl aminope 99.8 2.1E-17 7.1E-22 168.7 21.5 245 101-369 62-393 (723)
149 1pby_B Quinohemoprotein amine 99.8 5.5E-17 1.9E-21 149.3 21.5 249 112-419 2-308 (337)
150 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.9E-16 9.9E-21 146.8 25.3 262 101-419 41-339 (365)
151 3hfq_A Uncharacterized protein 99.7 3.5E-16 1.2E-20 145.1 24.4 211 101-374 87-324 (347)
152 3pe7_A Oligogalacturonate lyas 99.7 1.2E-16 4.1E-21 150.4 21.1 280 104-425 40-386 (388)
153 1k32_A Tricorn protease; prote 99.7 2.8E-16 9.4E-21 166.8 24.3 271 101-419 297-635 (1045)
154 1z68_A Fibroblast activation p 99.7 1.5E-16 5.1E-21 162.4 21.5 267 104-421 20-391 (719)
155 4a5s_A Dipeptidyl peptidase 4 99.7 7E-16 2.4E-20 157.8 25.9 237 102-376 19-360 (740)
156 1k32_A Tricorn protease; prote 99.7 1.9E-16 6.6E-21 168.0 22.4 271 101-417 205-498 (1045)
157 1jmx_B Amine dehydrogenase; ox 99.7 1.3E-15 4.3E-20 140.9 24.9 247 103-419 3-323 (349)
158 1pby_B Quinohemoprotein amine 99.7 2.1E-15 7.1E-20 138.7 19.8 224 102-375 36-316 (337)
159 3scy_A Hypothetical bacterial 99.7 1.4E-13 4.6E-18 128.3 30.3 250 108-420 10-290 (361)
160 3vgz_A Uncharacterized protein 99.7 9E-14 3.1E-18 128.7 27.1 211 101-353 90-334 (353)
161 1z68_A Fibroblast activation p 99.6 1.7E-14 5.8E-19 147.1 20.0 232 101-369 61-391 (719)
162 3c5m_A Oligogalacturonate lyas 99.6 9.5E-14 3.2E-18 130.7 23.6 293 102-423 38-384 (396)
163 1jmx_B Amine dehydrogenase; ox 99.6 1.5E-13 5.1E-18 126.9 21.3 76 278-375 255-331 (349)
164 3o4h_A Acylamino-acid-releasin 99.6 1.9E-14 6.6E-19 143.1 16.2 214 101-369 66-315 (582)
165 3azo_A Aminopeptidase; POP fam 99.6 9E-14 3.1E-18 140.3 21.1 256 101-420 25-322 (662)
166 1jof_A Carboxy-CIS,CIS-muconat 99.6 2.6E-13 8.9E-18 126.7 21.8 209 102-370 85-342 (365)
167 4a5s_A Dipeptidyl peptidase 4 99.5 2.9E-12 9.8E-17 131.0 28.5 192 103-310 65-354 (740)
168 3pe7_A Oligogalacturonate lyas 99.5 3.6E-13 1.2E-17 126.5 16.9 218 102-352 83-370 (388)
169 2xdw_A Prolyl endopeptidase; a 99.5 3.7E-12 1.3E-16 129.6 25.6 207 101-372 126-371 (710)
170 1q7f_A NHL, brain tumor CG1071 99.5 3E-11 1E-15 108.4 27.2 238 101-419 31-278 (286)
171 2dg1_A DRP35, lactonase; beta 99.5 7.4E-11 2.5E-15 108.3 28.5 241 101-412 46-301 (333)
172 1rwi_B Serine/threonine-protei 99.5 6.2E-11 2.1E-15 105.2 26.6 244 101-427 25-270 (270)
173 3fvz_A Peptidyl-glycine alpha- 99.5 3.2E-11 1.1E-15 110.8 25.0 253 101-419 25-320 (329)
174 3c5m_A Oligogalacturonate lyas 99.4 3.4E-12 1.2E-16 120.0 17.0 231 104-371 85-386 (396)
175 3e5z_A Putative gluconolactona 99.4 8.6E-11 3E-15 106.0 24.3 229 101-412 29-278 (296)
176 2gop_A Trilobed protease; beta 99.4 3E-11 1E-15 111.5 21.0 221 101-418 60-328 (347)
177 2dg1_A DRP35, lactonase; beta 99.4 4.5E-11 1.6E-15 109.7 21.6 240 101-419 7-261 (333)
178 2bkl_A Prolyl endopeptidase; m 99.4 4.2E-11 1.4E-15 121.5 22.7 231 101-373 122-401 (695)
179 2gop_A Trilobed protease; beta 99.4 5.1E-11 1.7E-15 110.0 20.8 223 100-420 15-290 (347)
180 3azo_A Aminopeptidase; POP fam 99.4 2.2E-11 7.5E-16 122.8 19.4 212 101-375 131-375 (662)
181 1qks_A Cytochrome CD1 nitrite 99.3 1.4E-09 4.9E-14 106.6 28.4 236 109-419 165-419 (567)
182 3hrp_A Uncharacterized protein 99.3 6.6E-10 2.2E-14 105.0 24.2 259 101-419 132-408 (409)
183 2oiz_A Aromatic amine dehydrog 99.3 7E-10 2.4E-14 103.1 23.4 243 104-419 54-332 (361)
184 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-09 4.3E-14 99.0 23.9 246 101-420 19-298 (314)
185 2bkl_A Prolyl endopeptidase; m 99.3 7.7E-10 2.6E-14 112.2 23.8 234 108-421 76-349 (695)
186 1q7f_A NHL, brain tumor CG1071 99.3 9.6E-10 3.3E-14 98.5 21.8 198 101-369 78-280 (286)
187 3g4e_A Regucalcin; six bladed 99.2 1E-08 3.6E-13 92.4 27.9 235 102-410 15-261 (297)
188 1xip_A Nucleoporin NUP159; bet 99.2 3.1E-10 1.1E-14 105.2 17.6 187 97-350 35-231 (388)
189 2z2n_A Virginiamycin B lyase; 99.2 3.7E-08 1.3E-12 88.3 30.3 256 101-418 16-292 (299)
190 3dsm_A Uncharacterized protein 99.2 4.3E-09 1.5E-13 96.4 24.4 239 102-419 46-300 (328)
191 2xdw_A Prolyl endopeptidase; a 99.2 2.3E-09 8E-14 108.9 24.5 212 101-371 172-416 (710)
192 1yr2_A Prolyl oligopeptidase; 99.2 1.4E-09 4.9E-14 111.0 22.2 230 101-372 164-444 (741)
193 1qks_A Cytochrome CD1 nitrite 99.2 1.4E-08 4.7E-13 99.7 26.5 258 101-419 198-475 (567)
194 1xip_A Nucleoporin NUP159; bet 99.1 2E-08 6.7E-13 93.2 24.6 253 102-425 90-386 (388)
195 3iuj_A Prolyl endopeptidase; h 99.1 5.6E-09 1.9E-13 105.8 22.8 206 101-373 130-363 (693)
196 3fvz_A Peptidyl-glycine alpha- 99.1 1E-08 3.5E-13 93.9 22.6 210 101-369 92-322 (329)
197 1rwi_B Serine/threonine-protei 99.1 5.4E-09 1.8E-13 92.6 20.1 198 101-372 68-267 (270)
198 1yr2_A Prolyl oligopeptidase; 99.1 8.4E-09 2.9E-13 105.4 23.3 236 108-420 115-392 (741)
199 2ghs_A AGR_C_1268P; regucalcin 99.1 8.9E-08 3.1E-12 87.5 27.6 232 102-411 51-292 (326)
200 3e5z_A Putative gluconolactona 99.1 2E-08 7E-13 90.3 21.2 193 101-371 70-288 (296)
201 3dsm_A Uncharacterized protein 99.1 2.9E-08 1E-12 90.8 22.2 206 101-379 85-311 (328)
202 3dr2_A Exported gluconolactona 99.1 4.6E-08 1.6E-12 88.5 22.9 229 101-412 46-298 (305)
203 2qc5_A Streptogramin B lactona 99.0 3E-07 1E-11 82.4 27.8 235 100-419 20-258 (300)
204 2mad_H Methylamine dehydrogena 99.0 3.4E-07 1.2E-11 85.2 28.3 244 104-419 70-348 (373)
205 3no2_A Uncharacterized protein 99.0 2.1E-07 7E-12 82.9 23.1 187 110-373 4-199 (276)
206 2oiz_A Aromatic amine dehydrog 98.9 8.4E-08 2.9E-12 89.0 20.2 220 101-345 109-360 (361)
207 2qe8_A Uncharacterized protein 98.9 8E-08 2.7E-12 88.5 19.2 249 101-415 18-315 (343)
208 3sjl_D Methylamine dehydrogena 98.9 1.4E-06 4.9E-11 80.4 26.6 273 106-419 39-361 (386)
209 3sjl_D Methylamine dehydrogena 98.9 1.7E-07 5.8E-12 86.6 20.3 226 104-375 82-369 (386)
210 2ece_A 462AA long hypothetical 98.9 2.6E-07 9E-12 86.1 21.2 160 239-409 190-399 (462)
211 2z2n_A Virginiamycin B lyase; 98.9 2.7E-06 9.3E-11 76.0 27.3 220 100-370 57-296 (299)
212 3c75_H MADH, methylamine dehyd 98.9 1.2E-06 4.3E-11 82.2 25.4 270 109-419 82-400 (426)
213 2qc5_A Streptogramin B lactona 98.9 3.3E-06 1.1E-10 75.4 27.3 232 101-418 63-297 (300)
214 3g4e_A Regucalcin; six bladed 98.9 1.1E-06 3.6E-11 79.1 23.9 198 145-419 14-227 (297)
215 3c75_H MADH, methylamine dehyd 98.9 1.1E-07 3.9E-12 89.3 17.7 228 104-374 122-407 (426)
216 2ghs_A AGR_C_1268P; regucalcin 98.8 3.4E-06 1.2E-10 76.9 24.4 155 238-419 91-258 (326)
217 3iuj_A Prolyl endopeptidase; h 98.8 6.9E-07 2.4E-11 90.4 21.4 204 102-373 177-409 (693)
218 3no2_A Uncharacterized protein 98.7 1.5E-06 5.2E-11 77.2 20.2 195 101-353 38-233 (276)
219 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 5.2E-06 1.8E-10 74.8 22.5 157 237-419 71-254 (314)
220 3hrp_A Uncharacterized protein 98.6 3.5E-06 1.2E-10 79.4 20.6 209 105-367 176-408 (409)
221 1mda_H Methylamine dehydrogena 98.6 1.6E-06 5.4E-11 80.1 17.4 226 104-376 69-353 (368)
222 2mad_H Methylamine dehydrogena 98.6 1.5E-05 5.1E-10 74.0 24.1 203 102-375 127-356 (373)
223 2fp8_A Strictosidine synthase; 98.6 3.6E-05 1.2E-09 69.9 25.6 247 102-419 21-311 (322)
224 2ece_A 462AA long hypothetical 98.5 2.8E-05 9.6E-10 72.5 23.5 195 103-351 141-399 (462)
225 2qe8_A Uncharacterized protein 98.5 3.1E-06 1.1E-10 77.8 17.0 212 101-350 68-308 (343)
226 1npe_A Nidogen, entactin; glyc 98.5 0.00013 4.5E-09 64.1 26.3 228 111-419 1-236 (267)
227 3dr2_A Exported gluconolactona 98.5 1E-05 3.5E-10 72.9 18.6 177 101-350 87-294 (305)
228 1mda_H Methylamine dehydrogena 98.4 5.2E-06 1.8E-10 76.6 15.1 245 122-419 47-344 (368)
229 1npe_A Nidogen, entactin; glyc 98.4 0.00049 1.7E-08 60.3 27.5 219 101-398 37-261 (267)
230 2iwa_A Glutamine cyclotransfer 98.3 4.8E-05 1.6E-09 66.4 18.3 200 102-370 23-238 (266)
231 2xe4_A Oligopeptidase B; hydro 98.3 5.9E-05 2E-09 76.9 21.8 60 101-164 175-241 (751)
232 1fwx_A Nitrous oxide reductase 98.3 2.2E-05 7.5E-10 75.8 17.3 221 109-369 99-361 (595)
233 1fwx_A Nitrous oxide reductase 98.2 3E-05 1E-09 74.9 15.2 155 257-419 174-359 (595)
234 2p4o_A Hypothetical protein; p 98.2 0.0016 5.4E-08 58.4 26.0 228 101-410 33-277 (306)
235 4hw6_A Hypothetical protein, I 98.1 0.0015 5.2E-08 61.7 25.7 257 101-419 140-431 (433)
236 3tc9_A Hypothetical hydrolase; 98.1 0.00096 3.3E-08 63.0 24.2 156 101-309 138-301 (430)
237 3v64_C Agrin; beta propeller, 98.1 0.0067 2.3E-07 55.5 27.9 233 102-418 36-272 (349)
238 3nol_A Glutamine cyclotransfer 98.1 0.00033 1.1E-08 60.5 17.4 184 102-350 45-242 (262)
239 3v65_B Low-density lipoprotein 98.0 0.0029 1E-07 58.8 25.1 232 103-418 80-315 (386)
240 1ijq_A LDL receptor, low-densi 98.0 0.0073 2.5E-07 54.4 26.6 230 113-419 3-236 (316)
241 2hz6_A Endoplasmic reticulum t 98.0 3.4E-06 1.2E-10 78.4 3.9 142 110-310 8-150 (369)
242 3nok_A Glutaminyl cyclase; bet 97.9 0.00058 2E-08 59.0 16.7 187 102-350 57-252 (268)
243 3p5b_L Low density lipoprotein 97.8 0.02 6.8E-07 53.4 26.6 229 113-418 85-317 (400)
244 2xe4_A Oligopeptidase B; hydro 97.8 0.00052 1.8E-08 69.9 16.4 119 239-370 176-305 (751)
245 3kya_A Putative phosphatase; s 97.7 0.032 1.1E-06 53.1 25.7 72 238-309 248-341 (496)
246 3mbr_X Glutamine cyclotransfer 97.6 0.0097 3.3E-07 50.8 19.2 187 102-350 23-221 (243)
247 3qqz_A Putative uncharacterize 97.6 0.034 1.2E-06 48.0 22.3 165 238-416 71-248 (255)
248 3v65_B Low-density lipoprotein 97.5 0.033 1.1E-06 51.6 23.6 201 101-373 117-322 (386)
249 3v64_C Agrin; beta propeller, 97.5 0.051 1.7E-06 49.6 26.8 200 101-372 74-278 (349)
250 3m0c_C LDL receptor, low-densi 97.5 0.063 2.1E-06 54.6 26.7 155 238-418 472-629 (791)
251 3tc9_A Hypothetical hydrolase; 97.4 0.0044 1.5E-07 58.5 16.4 157 237-418 137-298 (430)
252 2iwa_A Glutamine cyclotransfer 97.4 0.0059 2E-07 53.2 15.7 153 104-310 70-238 (266)
253 3sov_A LRP-6, low-density lipo 97.4 0.073 2.5E-06 47.8 25.4 227 113-419 6-236 (318)
254 3sre_A PON1, serum paraoxonase 97.4 0.081 2.8E-06 48.1 23.7 102 238-351 166-285 (355)
255 3qqz_A Putative uncharacterize 97.3 0.063 2.2E-06 46.3 24.9 198 101-349 28-240 (255)
256 1n7d_A LDL receptor, low-densi 97.3 0.0017 5.9E-08 65.3 12.1 153 241-419 457-612 (699)
257 4a2l_A BT_4663, two-component 97.3 0.098 3.4E-06 53.5 25.4 242 98-418 404-657 (795)
258 2fp8_A Strictosidine synthase; 97.3 0.033 1.1E-06 50.0 19.4 114 238-369 81-216 (322)
259 1ijq_A LDL receptor, low-densi 97.2 0.11 3.6E-06 46.6 26.4 205 101-373 31-242 (316)
260 4a2l_A BT_4663, two-component 97.2 0.28 9.4E-06 50.1 28.8 249 102-418 175-433 (795)
261 3nol_A Glutamine cyclotransfer 97.1 0.0087 3E-07 51.6 12.6 152 239-418 45-198 (262)
262 2p4o_A Hypothetical protein; p 97.0 0.13 4.4E-06 45.7 20.4 159 238-418 73-239 (306)
263 2xbg_A YCF48-like protein; pho 97.0 0.19 6.4E-06 45.2 23.1 166 100-296 80-268 (327)
264 3nok_A Glutaminyl cyclase; bet 97.0 0.011 3.6E-07 51.2 12.1 150 239-418 57-207 (268)
265 2hz6_A Endoplasmic reticulum t 96.9 0.00032 1.1E-08 64.9 2.5 106 244-373 45-153 (369)
266 3hxj_A Pyrrolo-quinoline quino 96.9 0.11 3.8E-06 46.3 19.4 219 111-423 107-326 (330)
267 3m0c_C LDL receptor, low-densi 96.9 0.31 1.1E-05 49.5 24.2 159 101-310 425-590 (791)
268 3amr_A 3-phytase; beta-propell 96.8 0.25 8.6E-06 44.5 21.3 125 238-373 129-268 (355)
269 2xbg_A YCF48-like protein; pho 96.8 0.25 8.5E-06 44.4 24.3 155 237-418 163-319 (327)
270 1kb0_A Quinohemoprotein alcoho 96.8 0.14 4.9E-06 51.2 21.0 22 110-131 127-148 (677)
271 1k3i_A Galactose oxidase precu 96.8 0.11 3.9E-06 51.7 20.4 69 104-173 190-273 (656)
272 3sov_A LRP-6, low-density lipo 96.8 0.27 9.4E-06 44.0 24.8 201 101-372 36-241 (318)
273 2ism_A Putative oxidoreductase 96.8 0.31 1.1E-05 44.3 24.8 59 101-162 32-96 (352)
274 1n7d_A LDL receptor, low-densi 96.7 0.021 7.1E-07 57.5 14.1 206 101-374 407-619 (699)
275 3p5b_L Low density lipoprotein 96.6 0.43 1.5E-05 44.3 26.9 158 101-309 113-277 (400)
276 3mbr_X Glutamine cyclotransfer 96.6 0.052 1.8E-06 46.3 13.8 153 238-418 22-176 (243)
277 3hxj_A Pyrrolo-quinoline quino 96.5 0.074 2.5E-06 47.5 14.8 187 101-369 138-324 (330)
278 1kb0_A Quinohemoprotein alcoho 96.5 0.088 3E-06 52.7 16.6 52 258-310 457-508 (677)
279 3pbp_A Nucleoporin NUP82; beta 96.4 0.41 1.4E-05 44.2 19.2 162 108-305 29-208 (452)
280 2p9w_A MAL S 1 allergenic prot 96.4 0.13 4.3E-06 46.0 15.3 69 239-308 139-214 (334)
281 3kya_A Putative phosphatase; s 96.4 0.29 1E-05 46.5 18.7 126 238-368 187-340 (496)
282 3a9g_A Putative uncharacterize 96.3 0.62 2.1E-05 42.3 27.1 58 101-161 30-93 (354)
283 3q7m_A Lipoprotein YFGL, BAMB; 96.3 0.33 1.1E-05 44.3 18.4 60 110-173 102-161 (376)
284 4a0p_A LRP6, LRP-6, low-densit 96.2 1.1 3.8E-05 44.2 27.5 224 112-418 7-234 (628)
285 3q7m_A Lipoprotein YFGL, BAMB; 96.2 0.7 2.4E-05 42.1 19.9 137 248-418 239-375 (376)
286 4a0p_A LRP6, LRP-6, low-densit 96.1 1.3 4.4E-05 43.8 24.9 198 101-371 38-239 (628)
287 4hw6_A Hypothetical protein, I 96.1 0.35 1.2E-05 45.4 17.5 72 102-173 230-303 (433)
288 1yiq_A Quinohemoprotein alcoho 96.0 0.076 2.6E-06 53.3 13.6 85 257-353 454-538 (689)
289 1tl2_A L10, protein (tachylect 96.0 0.29 9.9E-06 40.9 14.6 148 101-305 42-206 (236)
290 2g8s_A Glucose/sorbosone dehyd 96.0 0.86 2.9E-05 41.4 26.5 61 101-161 19-86 (353)
291 3v9f_A Two-component system se 96.0 1.6 5.5E-05 44.3 29.5 233 98-373 256-528 (781)
292 2p9w_A MAL S 1 allergenic prot 96.0 0.81 2.8E-05 40.8 21.6 118 239-369 65-215 (334)
293 1tl2_A L10, protein (tachylect 95.8 0.12 4.1E-06 43.1 11.2 101 237-350 41-152 (236)
294 3v9f_A Two-component system se 95.7 2.1 7.2E-05 43.4 30.0 230 97-373 310-572 (781)
295 3s25_A Hypothetical 7-bladed b 95.7 0.75 2.6E-05 40.7 17.1 105 243-371 151-257 (302)
296 2g8s_A Glucose/sorbosone dehyd 95.6 0.28 9.6E-06 44.6 14.5 111 237-349 18-146 (353)
297 3s25_A Hypothetical 7-bladed b 95.2 1.6 5.3E-05 38.7 17.9 63 244-310 191-256 (302)
298 1cru_A Protein (soluble quinop 95.0 1.7 6E-05 40.9 18.3 54 101-154 28-87 (454)
299 3a9g_A Putative uncharacterize 94.7 2.3 8E-05 38.5 18.0 58 238-295 260-329 (354)
300 2ism_A Putative oxidoreductase 94.7 0.92 3.1E-05 41.1 15.0 57 239-296 270-333 (352)
301 1yiq_A Quinohemoprotein alcoho 94.6 0.38 1.3E-05 48.2 13.0 53 242-294 480-534 (689)
302 3s94_A LRP-6, low-density lipo 94.5 4 0.00014 40.2 24.4 157 101-309 41-202 (619)
303 3das_A Putative oxidoreductase 94.4 2.7 9.2E-05 37.9 24.1 54 101-154 33-90 (347)
304 2ad6_A Methanol dehydrogenase 93.9 5 0.00017 39.0 21.1 21 111-131 115-135 (571)
305 1kv9_A Type II quinohemoprotei 93.4 6.7 0.00023 38.9 21.0 21 111-131 117-137 (668)
306 2xzh_A Clathrin heavy chain 1; 93.1 4.5 0.00015 36.0 26.9 209 104-373 71-294 (365)
307 3pbp_A Nucleoporin NUP82; beta 93.0 5.6 0.00019 36.8 20.4 162 244-418 28-209 (452)
308 3amr_A 3-phytase; beta-propell 92.9 5.1 0.00018 36.0 20.5 145 257-419 98-261 (355)
309 1cru_A Protein (soluble quinop 92.7 1 3.6E-05 42.4 11.8 110 237-350 27-161 (454)
310 1k3i_A Galactose oxidase precu 92.7 1.3 4.3E-05 44.1 13.0 121 241-375 190-329 (656)
311 1xi4_A Clathrin heavy chain; a 92.6 13 0.00045 40.1 21.8 208 105-373 71-293 (1630)
312 3das_A Putative oxidoreductase 92.4 2.3 7.8E-05 38.4 13.0 111 236-350 31-157 (347)
313 3s94_A LRP-6, low-density lipo 92.1 9.6 0.00033 37.4 27.9 118 238-372 393-513 (619)
314 3sre_A PON1, serum paraoxonase 92.1 6.1 0.00021 35.7 15.6 60 237-296 221-285 (355)
315 1kv9_A Type II quinohemoprotei 90.6 5.5 0.00019 39.6 15.0 53 257-310 437-489 (668)
316 2ad6_A Methanol dehydrogenase 90.5 2.3 7.8E-05 41.4 11.8 52 245-296 472-525 (571)
317 2xzh_A Clathrin heavy chain 1; 90.1 9.9 0.00034 33.9 15.9 118 241-372 71-192 (365)
318 1flg_A Protein (quinoprotein e 90.1 2.4 8.3E-05 41.4 11.6 48 247-294 496-545 (582)
319 1bpo_A Protein (clathrin); cla 89.9 12 0.00042 34.7 28.5 209 104-373 70-293 (494)
320 2wg3_C Hedgehog-interacting pr 87.8 10 0.00035 35.7 13.8 52 237-288 14-79 (463)
321 1bpo_A Protein (clathrin); cla 87.3 17 0.00059 33.8 14.2 118 241-372 70-191 (494)
322 3sbq_A Nitrous-oxide reductase 87.2 5.4 0.00019 38.3 11.2 130 238-372 324-481 (638)
323 1w6s_A Methanol dehydrogenase 85.1 29 0.001 33.8 22.6 28 104-131 110-141 (599)
324 1w6s_A Methanol dehydrogenase 81.7 15 0.0005 35.9 12.2 47 247-293 483-531 (599)
325 2wg3_C Hedgehog-interacting pr 76.0 52 0.0018 30.8 27.0 53 102-154 16-79 (463)
326 1flg_A Protein (quinoprotein e 75.7 60 0.0021 31.4 17.8 53 257-310 465-517 (582)
327 3sbq_A Nitrous-oxide reductase 74.2 4.3 0.00015 39.0 5.5 104 259-369 299-408 (638)
328 2vpj_A Kelch-like protein 12; 73.1 44 0.0015 28.6 16.7 23 110-132 62-89 (301)
329 1xi4_A Clathrin heavy chain; a 62.0 89 0.003 34.0 12.7 115 243-371 72-190 (1630)
330 3zwu_A Alkaline phosphatase PH 61.6 17 0.0006 35.2 7.1 59 238-296 477-549 (592)
331 3ei3_A DNA damage-binding prot 57.5 2E+02 0.0068 30.6 30.4 134 258-419 492-634 (1158)
332 4gq2_M Nucleoporin NUP120; bet 49.6 53 0.0018 34.1 8.8 31 101-131 237-267 (950)
333 4gq2_M Nucleoporin NUP120; bet 48.9 1.3E+02 0.0044 31.2 11.6 33 238-270 237-269 (950)
334 4a9v_A PHOX; hydrolase, beta-p 48.3 55 0.0019 31.6 7.9 63 237-299 476-552 (592)
335 3ei3_A DNA damage-binding prot 48.2 2.8E+02 0.0095 29.5 30.0 69 101-173 515-590 (1158)
336 3ii7_A Kelch-like protein 7; p 45.5 1.4E+02 0.0049 25.4 11.7 22 110-131 101-128 (306)
337 2vpj_A Kelch-like protein 12; 43.0 1.5E+02 0.0052 25.1 12.9 23 247-269 206-233 (301)
338 1zgk_A Kelch-like ECH-associat 40.9 1.7E+02 0.0058 25.0 11.1 23 247-269 215-242 (308)
339 2zwa_A Leucine carboxyl methyl 40.0 1.8E+02 0.0061 28.8 10.7 65 109-173 499-576 (695)
340 2xn4_A Kelch-like protein 2; s 38.3 1.8E+02 0.0063 24.6 12.9 23 247-269 204-231 (302)
341 4asc_A Kelch repeat and BTB do 35.5 2.1E+02 0.0072 24.4 12.1 23 247-269 196-223 (315)
342 3zwu_A Alkaline phosphatase PH 34.4 88 0.003 30.3 7.1 60 101-160 477-547 (592)
343 2xn4_A Kelch-like protein 2; s 33.2 2E+02 0.0067 24.4 8.9 23 247-269 251-278 (302)
344 1zgk_A Kelch-like ECH-associat 32.8 2.3E+02 0.0079 24.1 16.1 16 360-375 278-293 (308)
345 3ott_A Two-component system se 31.9 3.9E+02 0.013 26.4 25.2 112 238-373 147-264 (758)
346 4hvt_A Ritya.17583.B, post-pro 29.5 4.3E+02 0.015 26.2 22.9 100 256-368 318-429 (711)
347 3ii7_A Kelch-like protein 7; p 29.1 2.6E+02 0.009 23.6 18.1 17 360-376 263-279 (306)
348 4a9v_A PHOX; hydrolase, beta-p 25.3 1.9E+02 0.0065 27.9 7.5 61 101-161 477-548 (592)
349 4fhn_B Nucleoporin NUP120; pro 24.6 39 0.0013 35.9 3.1 32 239-270 240-271 (1139)
350 2uvk_A YJHT; unknown function, 23.7 3.6E+02 0.012 23.4 12.5 151 110-311 118-344 (357)
351 4asc_A Kelch repeat and BTB do 22.8 3.5E+02 0.012 22.9 15.7 51 247-299 148-207 (315)
352 3f7f_A Nucleoporin NUP120; nuc 22.3 85 0.0029 31.2 4.6 30 239-270 224-253 (729)
353 3f7f_A Nucleoporin NUP120; nuc 21.3 1.7E+02 0.0057 29.1 6.4 29 101-131 223-251 (729)
354 4fhn_B Nucleoporin NUP120; pro 21.0 73 0.0025 33.8 4.2 31 101-131 239-269 (1139)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=260.59 Aligned_cols=266 Identities=13% Similarity=0.156 Sum_probs=201.7
Q ss_pred ceeeeEEcCC----CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQH----KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~----g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~ 176 (427)
.|++++|+|+ +.+|++|+.|++|+||++............+|...|.+++|+|++..+++++.|+.|++||+.
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~--- 110 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE--- 110 (321)
T ss_dssp CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT---
T ss_pred cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC---
Confidence 8999999985 569999999999999999876322333457899999999999999444444566999999997
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccCCe
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFGGL 239 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~~v 239 (427)
++ ..+..+..+ ...+.+++|+|+|++++.+. .+..+...+
T Consensus 111 ------~~----------------~~~~~~~~~-~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v 167 (321)
T 3ow8_A 111 ------NG----------------KQIKSIDAG-PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFI 167 (321)
T ss_dssp ------TT----------------EEEEEEECC-TTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCE
T ss_pred ------CC----------------CEEEEEeCC-CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceE
Confidence 11 334444444 66788999999999866442 123456779
Q ss_pred EEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccc
Q 014302 240 SILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHL 318 (427)
Q Consensus 240 ~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~ 318 (427)
.+++|+|+|++|++++.|+.|++||+++++.. .+..|...|.+++|+|++++|++++ .++.+++|++......
T Consensus 168 ~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s-~dg~i~iwd~~~~~~~----- 241 (321)
T 3ow8_A 168 LSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS-DDGYIKIYDVQHANLA----- 241 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC-TTSCEEEEETTTCCEE-----
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc-CCCeEEEEECCCccee-----
Confidence 99999999999999999999999999988764 4457899999999999999998765 5558888887654210
Q ss_pred cccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccC
Q 014302 319 LPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDK 398 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 398 (427)
.....+...|.+++|+|++++|++ ++.| ++|+|||+.++.++.. +.+.. ....+++|.|+
T Consensus 242 -------~~~~~h~~~v~~~~~sp~~~~l~s---~s~D---~~v~iwd~~~~~~~~~-----~~~h~--~~v~~v~~s~~ 301 (321)
T 3ow8_A 242 -------GTLSGHASWVLNVAFCPDDTHFVS---SSSD---KSVKVWDVGTRTCVHT-----FFDHQ--DQVWGVKYNGN 301 (321)
T ss_dssp -------EEECCCSSCEEEEEECTTSSEEEE---EETT---SCEEEEETTTTEEEEE-----ECCCS--SCEEEEEECTT
T ss_pred -------EEEcCCCCceEEEEECCCCCEEEE---EeCC---CcEEEEeCCCCEEEEE-----EcCCC--CcEEEEEECCC
Confidence 011123447999999999999998 5556 6699999998876532 22222 23668999886
Q ss_pred CCCCceeEEEeeCceEEEEeccc
Q 014302 399 FKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 399 ~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
+..|+.+..||.|.+|+..+
T Consensus 302 ---g~~l~s~~~d~~i~vwd~p~ 321 (321)
T 3ow8_A 302 ---GSKIVSVGDDQEIHIYDCPI 321 (321)
T ss_dssp ---SSEEEEEETTCCEEEEECC-
T ss_pred ---CCEEEEEeCCCeEEEEeCCC
Confidence 77888888999999999753
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.6e-33 Score=265.50 Aligned_cols=266 Identities=14% Similarity=0.199 Sum_probs=208.8
Q ss_pred CCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccC
Q 014302 97 LPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 174 (427)
Q Consensus 97 l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~ 174 (427)
+.+| .|++++|+|++++|++|+.|++|+|||+..+ .......+|...|++++|+|++..+++++.|+.|++||+.
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~--~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~- 180 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG--DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ- 180 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC--CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT-
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-
Confidence 3455 8999999999999999999999999999887 4555667899999999999999544445566999999997
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccC
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFG 237 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~ 237 (427)
...++..+..| ...|.+++|+|+|+++.++. .+..|..
T Consensus 181 ------------------------~~~~~~~~~~h-~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~ 235 (410)
T 1vyh_C 181 ------------------------GFECIRTMHGH-DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235 (410)
T ss_dssp ------------------------SSCEEECCCCC-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred ------------------------CCceeEEEcCC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc
Confidence 22345556666 78899999999998865432 2455778
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCC--------------------CCEEEEEE
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPE--------------------GRMILLAF 296 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spd--------------------g~~l~~~~ 296 (427)
.+.++.|+|++++|++++.|+.|++||+++.++. .+..|...|.+++|+|+ |.+|++++
T Consensus 236 ~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs 315 (410)
T 1vyh_C 236 WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS 315 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe
Confidence 8999999999999999999999999999988764 44589999999999997 56787765
Q ss_pred cCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEe
Q 014302 297 AGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLS 376 (427)
Q Consensus 297 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~ 376 (427)
.++.+++|++...... .....+.+.|.+++|+|+|++|++ ++.| ++|++||+.++.++..
T Consensus 316 -~D~~i~iwd~~~~~~~------------~~~~~h~~~v~~v~~~~~g~~l~s---~s~D---~~i~vwd~~~~~~~~~- 375 (410)
T 1vyh_C 316 -RDKTIKMWDVSTGMCL------------MTLVGHDNWVRGVLFHSGGKFILS---CADD---KTLRVWDYKNKRCMKT- 375 (410)
T ss_dssp -TTSEEEEEETTTTEEE------------EEEECCSSCEEEEEECSSSSCEEE---EETT---TEEEEECCTTSCCCEE-
T ss_pred -CCCeEEEEECCCCceE------------EEEECCCCcEEEEEEcCCCCEEEE---EeCC---CeEEEEECCCCceEEE-
Confidence 5558888887654210 111224458999999999999998 5666 7799999988776522
Q ss_pred eeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 377 LIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
+.+... ...+++|+|+ +..|+.|..||.|.+|++
T Consensus 376 ----~~~h~~--~v~~l~~~~~---~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 376 ----LNAHEH--FVTSLDFHKT---APYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ----EECCSS--CEEEEEECSS---SSCEEEEETTSEEEEEC-
T ss_pred ----EcCCCC--cEEEEEEcCC---CCEEEEEeCCCcEEEEeC
Confidence 233322 3678999996 668999999999999985
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.8e-32 Score=252.60 Aligned_cols=271 Identities=14% Similarity=0.176 Sum_probs=204.4
Q ss_pred CCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccC
Q 014302 97 LPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 174 (427)
Q Consensus 97 l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~ 174 (427)
+.+| .|++++|+|++++|++|+.|++|+|||+... ........|...|.+++|+|++..+++++.++.+++|++..
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~ 128 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT--NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC--CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECcc
Confidence 4455 8999999999999999999999999998877 44555567888999999999995444455669999999871
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc-------------cCc---eEEeccCC
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG-------------LGT---PIRRGFGG 238 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-------------~~~---~~~~~~~~ 238 (427)
.. ........+.+| ...|.++.|++++.++. .+. .+..|.+.
T Consensus 129 ~~---------------------~~~~~~~~~~~h-~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~ 186 (340)
T 1got_B 129 RE---------------------GNVRVSRELAGH-TGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGD 186 (340)
T ss_dssp CS---------------------BSCEEEEEEECC-SSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred CC---------------------CcceeEEEecCC-CccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCc
Confidence 10 112233345555 77888999988876532 121 23457889
Q ss_pred eEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccc
Q 014302 239 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 317 (427)
|.+++|+|++++|++++.|+.|++||++++... .+..|...|.+++|+|++++|++++. ++.+++|++.......
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-d~~v~iwd~~~~~~~~--- 262 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD-DATCRLFDLRADQELM--- 262 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTTEEEE---
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC-CCcEEEEECCCCcEEE---
Confidence 999999999999999999999999999988764 45589999999999999999998754 4588888876542100
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEecc
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHD 397 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 397 (427)
. .........|.+++|+|+|++|++ ++.| +.|++||+.++..+. .+.+... ...+++|.|
T Consensus 263 ~-------~~~~~~~~~v~~~~~s~~g~~l~~---g~~d---~~i~vwd~~~~~~~~-----~~~~h~~--~v~~~~~s~ 322 (340)
T 1got_B 263 T-------YSHDNIICGITSVSFSKSGRLLLA---GYDD---FNCNVWDALKADRAG-----VLAGHDN--RVSCLGVTD 322 (340)
T ss_dssp E-------ECCTTCCSCEEEEEECTTSSEEEE---EETT---SEEEEEETTTCCEEE-----EEECCSS--CEEEEEECT
T ss_pred E-------EccCCcccceEEEEECCCCCEEEE---ECCC---CeEEEEEcccCcEee-----EeecCCC--cEEEEEEcC
Confidence 0 000011236899999999999999 5666 679999998876542 2333333 366899988
Q ss_pred CCCCCceeEEEeeCceEEEEe
Q 014302 398 KFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 398 ~~~~g~~l~v~~~~g~i~~~~ 418 (427)
+ |..|+.|..||.|.+|+
T Consensus 323 d---g~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 323 D---GMAVATGSWDSFLKIWN 340 (340)
T ss_dssp T---SSCEEEEETTSCEEEEC
T ss_pred C---CCEEEEEcCCccEEecC
Confidence 6 77899999999999985
No 4
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-32 Score=252.60 Aligned_cols=289 Identities=17% Similarity=0.276 Sum_probs=204.8
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCc-ceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKD-ACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~-~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
.|.+++|+|+|++||+|+.|++|+||++...... ......+|...|.+++|+|++..+++++.|+.+++|++.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~------ 91 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN------ 91 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC------
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc------
Confidence 6899999999999999999999999999876221 123346799999999999999544444556999999987
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------------------eEEeccCCe
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------------------PIRRGFGGL 239 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------------~~~~~~~~v 239 (427)
.....+...+.+| ...|.+++|+|+|++++++. .+..|...|
T Consensus 92 -----------------~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v 153 (345)
T 3fm0_A 92 -----------------QDDFECVTTLEGH-ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV 153 (345)
T ss_dssp -----------------CC-EEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE
T ss_pred -----------------CCCeEEEEEccCC-CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe
Confidence 1133445556666 88999999999999866432 123467889
Q ss_pred EEEEEccCCCEEEEEecCCcEEEEEcCCCCc---cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Cc
Q 014302 240 SILKWSPTGDYFFAAKFDGTFYLWETNTWTS---EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SL 314 (427)
Q Consensus 240 ~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~ 314 (427)
.+++|+|++++|++++.|+.|++||++..+. ..+..|...|.+++|+|+|++|++++ .++.+++|+...... .+
T Consensus 154 ~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s-~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 154 KHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS-DDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEEECTTCTTCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe-CCCeEEEeccccCCCCccc
Confidence 9999999999999999999999999987653 34458999999999999999999875 455888888654211 10
Q ss_pred cccccccccccceee--ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE---EEeeeeeeeCCCCCCC
Q 014302 315 DAHLLPVDLPDIVSL--TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI---SLSLIGFIRGPGDNPK 389 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~--~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~ 389 (427)
..............+ .+...|.+++|+|++..||+ ++.| +.|++|+....... ......... ......
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s---~~~d---~~i~vw~~~~~~~~~~~~~~~~~~~~-~~h~~~ 305 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALAT---ACGD---DAIRVFQEDPNSDPQQPTFSLTAHLH-QAHSQD 305 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEE---EETT---SCEEEEEECTTSCTTSCCEEEEEEET-TSSSSC
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEE---EeCC---CeEEEEEeCCCCCcceeeEEEEeeec-ccccCc
Confidence 000000000000111 14558999999999999998 4555 56999998754311 001111111 112234
Q ss_pred ceeEEeccCCCCCceeEEEeeCceEEEEeccccC
Q 014302 390 PVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIFRS 423 (427)
Q Consensus 390 ~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~~~ 423 (427)
..+++|+|+ ...+|+.|..||.|.+|++--..
T Consensus 306 V~~v~~~p~--~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 306 VNCVAWNPK--EPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EEEEEECSS--STTEEEEEETTSCEEEEEECC--
T ss_pred EeEeEEeCC--CceEEEEcCCCCcEEEEEecCCC
Confidence 779999996 23589999999999999975443
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-31 Score=245.61 Aligned_cols=257 Identities=13% Similarity=0.160 Sum_probs=195.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++||+++.|++|+|||+... ........|...|.+++|+|++..+++++.++.|++|++.
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~------- 85 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN------- 85 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-------
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCC--ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC-------
Confidence 7999999999999999999999999999877 4555566788999999999999545555566999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc------------------eEEeccCCeEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT------------------PIRRGFGGLSIL 242 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~------------------~~~~~~~~v~~~ 242 (427)
++ ..+..+..| ...|.+++|+|++++++++. .+..|...|.++
T Consensus 86 --~~----------------~~~~~~~~h-~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 86 --TG----------------EKVVDFEAH-PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (304)
T ss_dssp --TC----------------CEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEE
T ss_pred --CC----------------cEEEEEeCC-CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEE
Confidence 22 344456666 78899999999998865432 134577889999
Q ss_pred EEcc-CCCEEEEEecCCcEEEEEcCCCCccccc--cCCCCeeEEEECC--CCCEEEEEEcCCceeeeeeeCCCCC--Ccc
Q 014302 243 KWSP-TGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDP--EGRMILLAFAGSLTLGSIHFASKPP--SLD 315 (427)
Q Consensus 243 ~~sp-~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~sp--dg~~l~~~~~~~~~i~~~~~~~~~~--~~~ 315 (427)
+|+| ++..|++++.|++|++||+++....... .+...+..++|+| ++++|++++ .++.+++|++..... .+.
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-~D~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE-TTSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc-CCCeEEEEeCCCCccceeeC
Confidence 9999 6789999999999999999877653322 5667899999987 678888765 455888888776421 122
Q ss_pred ccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEe
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 395 (427)
+ +...|..++|+|++++||+ ++.| |+|++||++++++.... ... .....+++|
T Consensus 226 ~--------------h~~~v~~~~~~p~~~~l~s---~s~D---g~i~iWd~~~~~~~~~~-----~~~--~~~~~~~~~ 278 (304)
T 2ynn_A 226 G--------------HMSNVSFAVFHPTLPIIIS---GSED---GTLKIWNSSTYKVEKTL-----NVG--LERSWCIAT 278 (304)
T ss_dssp C--------------CSSCEEEEEECSSSSEEEE---EETT---SCEEEEETTTCCEEEEE-----CCS--SSSEEEEEE
T ss_pred C--------------CCCCEEEEEECCCCCEEEE---EcCC---CeEEEEECCCCceeeec-----cCC--CccEEEEEE
Confidence 2 3448999999999999998 5666 67999999988766332 221 223568999
Q ss_pred ccCCCCCc-eeEEEeeCceEE
Q 014302 396 HDKFKQGP-LLSVCWSSGFCC 415 (427)
Q Consensus 396 ~~~~~~g~-~l~v~~~~g~i~ 415 (427)
+|. .+. .++.|+.+|.+.
T Consensus 279 ~~~--~~~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 279 HPT--GRKNYIASGFDNGFTV 297 (304)
T ss_dssp CTT--CGGGCEEEEETTEEEE
T ss_pred CCC--CCceEEEEecCCceEE
Confidence 886 233 588887666443
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-32 Score=255.88 Aligned_cols=270 Identities=15% Similarity=0.184 Sum_probs=193.5
Q ss_pred CceeeeEEcCCCCEEEEEeC------CCeEEEEEccCCCC--cceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEe
Q 014302 100 VDLQGVSWHQHKHIVAFISG------STQVIVRDYEDSGK--DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWA 171 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~------d~~v~vwd~~~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~ 171 (427)
..|++++|||||++||+++. |+.|++|+...... .......+|...|.+++|+|++ .+|+++.++.|+|||
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~lWd 121 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGAVELWE 121 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSCEEEC-
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCEEEEee
Confidence 37999999999999999997 67899988766521 1223334588899999999998 788888889999999
Q ss_pred ccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEe
Q 014302 172 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRR 234 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~ 234 (427)
+..... ..........+...|++++|+|+|++++++. .+..
T Consensus 122 ~~~~~~----------------------~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 179 (357)
T 4g56_B 122 ILEKES----------------------LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA 179 (357)
T ss_dssp -----------------------------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred ccccce----------------------eEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 871110 0000111112378899999999999866432 1345
Q ss_pred ccCCeEEEEEccCCC-EEEEEecCCcEEEEEcCCCCcccc---ccCCCCeeEEEECCCCC-EEEEEEcCCceeeeeeeCC
Q 014302 235 GFGGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWTSEPW---SSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 235 ~~~~v~~~~~sp~g~-~l~~~~~dg~v~iwd~~~~~~~~~---~~~~~~v~~v~~spdg~-~l~~~~~~~~~i~~~~~~~ 309 (427)
|...|.+++|+|++. ++++++.|+.|++||+++++.... ..+...+.+++|+|++. +|++ ++.++.+++|++..
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~-g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC-GDETGNVSLVNIKN 258 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE-EESSSCEEEEESSC
T ss_pred CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE-eecccceeEEECCC
Confidence 788999999999986 677999999999999998876433 25777899999999865 5555 45666888888776
Q ss_pred CCCCccccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCC
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNP 388 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 388 (427)
.... .....+...|++++|+|++. +||+ ++.| ++|+|||+++++++... +.. .
T Consensus 259 ~~~~------------~~~~~~~~~v~~l~~sp~~~~~las---gs~D---~~i~iwd~~~~~~~~~~------~H~--~ 312 (357)
T 4g56_B 259 PDSA------------QTSAVHSQNITGLAYSYHSSPFLAS---ISED---CTVAVLDADFSEVFRDL------SHR--D 312 (357)
T ss_dssp GGGC------------EEECCCSSCEEEEEECSSSSCCEEE---EETT---SCEEEECTTSCEEEEEC------CCS--S
T ss_pred CcEe------------EEEeccceeEEEEEEcCCCCCEEEE---EeCC---CEEEEEECCCCcEeEEC------CCC--C
Confidence 4210 01112344899999999984 6777 5666 66999999998776332 222 2
Q ss_pred CceeEEeccCCCCCceeEEEeeCceEEEEeccc
Q 014302 389 KPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 389 ~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
...+++|+|. ++.+|+.|..||.|.+|++.=
T Consensus 313 ~V~~vafsP~--d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 313 FVTGVAWSPL--DHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CEEEEEECSS--STTEEEEEETTSCEEEEECC-
T ss_pred CEEEEEEeCC--CCCEEEEEcCCCeEEEEECCC
Confidence 3668999985 367888898999999999753
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.2e-32 Score=251.15 Aligned_cols=267 Identities=15% Similarity=0.158 Sum_probs=190.3
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccC-----C----CCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEE
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYED-----S----GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIW 170 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~-----~----~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw 170 (427)
..|.+++|+|||++|++++ |+++++||... . ..........+...|.+++|+|++ .+++++.++.|+||
T Consensus 31 ~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lW 108 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELW 108 (344)
T ss_dssp SEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEE
Confidence 3699999999999999887 77777776321 1 111122223466789999999997 77777778999999
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEe-ehhcccCCCceeeeEeCCCCCCcccCc-----------------eE
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLV-DFLRSQNGEQITALSWGPDGRFPGLGT-----------------PI 232 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~ 232 (427)
|+.... ..... ..+.+| ...|++++|+|+|++++++. .+
T Consensus 109 d~~~~~----------------------~~~~~~~~~~~H-~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 109 ELDENE----------------------TLIVSKFCKYEH-DDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp EECTTS----------------------SCEEEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred eccCCC----------------------ceeEeeccccCC-CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 997111 11111 122344 78899999999999866442 13
Q ss_pred EeccCCeEEEEEccCCC-EEEEEecCCcEEEEEcCCCCcccc---ccCCCCeeEEEECCCCC-EEEEEEcCCceeeeeee
Q 014302 233 RRGFGGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWTSEPW---SSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHF 307 (427)
Q Consensus 233 ~~~~~~v~~~~~sp~g~-~l~~~~~dg~v~iwd~~~~~~~~~---~~~~~~v~~v~~spdg~-~l~~~~~~~~~i~~~~~ 307 (427)
..|...|.+++|+|++. .|++++.|++|++||+++++.... ..+...+.+++|+|++. +|+++ +.++.+++|++
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg-~~dg~v~~wd~ 244 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG-DENGTVSLVDT 244 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE-ETTSEEEEEES
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe-ccCCcEEEEEC
Confidence 45889999999999986 677999999999999998887432 25667799999999655 55554 56668888888
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCC
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGD 386 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~ 386 (427)
...... .....+...|++++|+|+|. +||+ ++.| ++|+|||+++++++.+ .+...
T Consensus 245 ~~~~~~------------~~~~~h~~~v~~v~fsp~g~~~las---gs~D---~~i~vwd~~~~~~~~~------~~H~~ 300 (344)
T 4gqb_B 245 KSTSCV------------LSSAVHSQCVTGLVFSPHSVPFLAS---LSED---CSLAVLDSSLSELFRS------QAHRD 300 (344)
T ss_dssp CC--CC------------EEEECCSSCEEEEEECSSSSCCEEE---EETT---SCEEEECTTCCEEEEE------CCCSS
T ss_pred CCCcEE------------EEEcCCCCCEEEEEEccCCCeEEEE---EeCC---CeEEEEECCCCcEEEE------cCCCC
Confidence 764221 11112345899999999984 6777 5666 6699999998876532 23222
Q ss_pred CCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 387 NPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 387 ~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
...+++|+|+ ...+|+.|..||+|.+|.+-
T Consensus 301 --~V~~v~~sp~--~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 301 --FVRDATWSPL--NHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp --CEEEEEECSS--STTEEEEEETTSCEEEEECC
T ss_pred --CEEEEEEeCC--CCeEEEEEcCCCeEEEEECC
Confidence 3678999996 34578888889999999874
No 8
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.4e-31 Score=265.48 Aligned_cols=242 Identities=19% Similarity=0.181 Sum_probs=177.2
Q ss_pred CCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC----CeEEEE
Q 014302 97 LPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK----GGICIW 170 (427)
Q Consensus 97 l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~----~~i~iw 170 (427)
+.+| .|++++|+|+|++||+|+.|++|+|||+.............|...|.+++|+|++..+++++.+ +.|++|
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~w 134 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF 134 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEET
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEe
Confidence 3444 7999999999999999999999999999765333344556789999999999999555555543 367788
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCC-cccCc-----------------eE
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRF-PGLGT-----------------PI 232 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~-----------------~~ 232 (427)
+.. .....+.+| ...|.+++|+|++.. ++++. .+
T Consensus 135 d~~---------------------------~~~~~l~gh-~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l 186 (611)
T 1nr0_A 135 DTG---------------------------TSNGNLTGQ-ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF 186 (611)
T ss_dssp TTC---------------------------CBCBCCCCC-SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEE
T ss_pred eCC---------------------------CCcceecCC-CCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeee
Confidence 754 123345555 788999999999874 44321 24
Q ss_pred EeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc--------cCCCCeeEEEECCCCCEEEEEEcCCceeee
Q 014302 233 RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--------STSGFVTGATWDPEGRMILLAFAGSLTLGS 304 (427)
Q Consensus 233 ~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~--------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~ 304 (427)
..|...|.+++|+|+|++|++++.|++|++||+.+++..... .|...|.+++|+|+|++|++++. ++.+++
T Consensus 187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~-D~~v~l 265 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA-DKTIKI 265 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET-TSEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC-CCeEEE
Confidence 458889999999999999999999999999999887753221 68999999999999999998754 558888
Q ss_pred eeeCCCCC--Ccccc-------------------------cccccccc---ce-eeccCCceeEEEECCCCCEEEEEEec
Q 014302 305 IHFASKPP--SLDAH-------------------------LLPVDLPD---IV-SLTGSQGIEKIAWDASGERLAVSYKG 353 (427)
Q Consensus 305 ~~~~~~~~--~~~~~-------------------------~~~~~~~~---~~-~~~~~~~i~~v~~sp~g~~La~~~~~ 353 (427)
|++..... .+..+ ...++... .. ...|...|.+++|+|+|++|++ +
T Consensus 266 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s---~ 342 (611)
T 1nr0_A 266 WNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFS---A 342 (611)
T ss_dssp EETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE---E
T ss_pred EeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEE---E
Confidence 88765321 11000 00000000 01 1235568999999999999999 5
Q ss_pred CCCcceeEEEEEEeccCceE
Q 014302 354 GDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 354 ~~d~~~g~i~vwd~~~~~~~ 373 (427)
+.| ++|++||+.++.+.
T Consensus 343 s~D---~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 343 DAE---GHINSWDISTGISN 359 (611)
T ss_dssp ETT---SCEEEEETTTCCEE
T ss_pred eCC---CcEEEEECCCCcee
Confidence 556 66999999876543
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.4e-31 Score=245.21 Aligned_cols=273 Identities=14% Similarity=0.146 Sum_probs=201.7
Q ss_pred CCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccC
Q 014302 97 LPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 174 (427)
Q Consensus 97 l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~ 174 (427)
+.+| .|++++|+|++++||+|+.|++|+|||.... ........|...|.+++|+|++..+++.+.++.+++|++..
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~--~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~ 137 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT--NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF 137 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC--CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence 4455 7999999999999999999999999998776 34444456778899999999995444445569999999863
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC--------------c---eEEeccC
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG--------------T---PIRRGFG 237 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--------------~---~~~~~~~ 237 (427)
....... .....+..| ...|.+++|+|++..+.++ . .+..|..
T Consensus 138 ~~~~~~~-------------------~~~~~~~~h-~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 138 DKNENMA-------------------AKKKSVAMH-TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp CTTCCSG-------------------GGCEEEEEC-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred ccccccc-------------------ccceeeecc-CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 2111000 111223344 7789999999998765433 1 2455788
Q ss_pred CeEEEEEcc--CCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCc
Q 014302 238 GLSILKWSP--TGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSL 314 (427)
Q Consensus 238 ~v~~~~~sp--~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~ 314 (427)
.+.+++|+| ++++|++++.||.|++||++++++. .+..|...|.+++|+|++++|++++. ++.+++|++......
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-D~~v~lwd~~~~~~~- 275 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSD-DATCRLYDLRADREV- 275 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTTEEE-
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeC-CCeEEEEECCCCcEE-
Confidence 899999987 5789999999999999999998874 44589999999999999999998754 458888887654110
Q ss_pred cccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEE
Q 014302 315 DAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFS 394 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (427)
.. .........+.+++|+|+|++|++ ++.| ++|+|||+.++..+. .+.+.. ....+++
T Consensus 276 --~~-------~~~~~~~~~~~~~~~s~~g~~l~~---g~~d---~~i~vwd~~~~~~~~-----~l~~h~--~~v~~l~ 333 (354)
T 2pbi_B 276 --AI-------YSKESIIFGASSVDFSLSGRLLFA---GYND---YTINVWDVLKGSRVS-----ILFGHE--NRVSTLR 333 (354)
T ss_dssp --EE-------ECCTTCCSCEEEEEECTTSSEEEE---EETT---SCEEEEETTTCSEEE-----EECCCS--SCEEEEE
T ss_pred --EE-------EcCCCcccceeEEEEeCCCCEEEE---EECC---CcEEEEECCCCceEE-----EEECCC--CcEEEEE
Confidence 00 000011226889999999999999 5555 569999998877652 222322 2366899
Q ss_pred eccCCCCCceeEEEeeCceEEEEe
Q 014302 395 FHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 395 f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
|.|+ |..|++|..||.|.+|+
T Consensus 334 ~spd---g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 334 VSPD---GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTT---SSCEEEEETTSEEEEEC
T ss_pred ECCC---CCEEEEEcCCCCEEecC
Confidence 9986 77899999999999984
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-30 Score=262.01 Aligned_cols=276 Identities=13% Similarity=0.196 Sum_probs=204.7
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
..+.+++|+|+|++||+++ +++|+||++... .......+|...|++++|+|+| .+||+|+ ++.|+|||+..
T Consensus 19 g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~--~~~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~---- 90 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSL--TDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQ---- 90 (611)
T ss_dssp TCCCCCEECTTSSEEEEEE-TTEEEEEETTCS--SCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSS----
T ss_pred CceeEEeeCCCCCEEEeCC-CCEEEEecCCCc--ccCeEecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCC----
Confidence 3678999999999999997 569999999765 4555667899999999999999 6666664 59999999851
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-------------------eEEeccCCe
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-------------------PIRRGFGGL 239 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-------------------~~~~~~~~v 239 (427)
+ .......+..| ...|.+++|+|||+.++.+. .+..|...|
T Consensus 91 -----~--------------~~~~~~~~~~~-~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v 150 (611)
T 1nr0_A 91 -----T--------------THILKTTIPVF-SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAM 150 (611)
T ss_dssp -----T--------------TCCEEEEEECS-SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCE
T ss_pred -----C--------------cceeeEeeccc-CCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCc
Confidence 1 11122234444 77899999999999865321 235688899
Q ss_pred EEEEEccCCC-EEEEEecCCcEEEEEcCCCCc-cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccc
Q 014302 240 SILKWSPTGD-YFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 240 ~~~~~sp~g~-~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 317 (427)
.+++|+|++. .|++++.|++|++||..+.+. ..+..|...|.+++|+|||++|++++. ++.+++|++.+..... .
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~-D~~i~lwd~~~g~~~~--~ 227 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG-DGTIVLYNGVDGTKTG--V 227 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTCCEEE--E
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC-CCcEEEEECCCCcEee--e
Confidence 9999999997 588999999999999887665 344589999999999999999998755 4588888876542100 0
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeee------------------
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIG------------------ 379 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~------------------ 379 (427)
..........|.+.|.+++|+|+|++||+ ++.| ++|+|||+.++.++...+.+
T Consensus 228 ---~~~~~~~~~~h~~~V~~v~~spdg~~l~s---~s~D---~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 228 ---FEDDSLKNVAHSGSVFGLTWSPDGTKIAS---ASAD---KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp ---CBCTTSSSCSSSSCEEEEEECTTSSEEEE---EETT---SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred ---eccccccccccCCCEEEEEECCCCCEEEE---EeCC---CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 00000111235568999999999999999 5566 77999999887654322110
Q ss_pred --------------------eeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 380 --------------------FIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 380 --------------------~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
.+.+ ......+++|.|+ |..|+.+..||.|.+|++.
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~g--h~~~v~~l~~spd---g~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYG--HNKAITALSSSAD---GKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECC--CSSCEEEEEECTT---SSEEEEEETTSCEEEEETT
T ss_pred EEeCCCcEEEEeCCCCCcceEEcC--CCCCEEEEEEeCC---CCEEEEEeCCCcEEEEECC
Confidence 1112 2234668899885 7889999999999999863
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.6e-30 Score=239.35 Aligned_cols=272 Identities=13% Similarity=0.167 Sum_probs=204.4
Q ss_pred CCC--ceeeeEEcCCC-CEEEEEeCCCeEEEEEccCCCC---cceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEe
Q 014302 98 PEV--DLQGVSWHQHK-HIVAFISGSTQVIVRDYEDSGK---DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWA 171 (427)
Q Consensus 98 ~~~--~V~~l~~sp~g-~~lat~~~d~~v~vwd~~~~~~---~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~ 171 (427)
.+| .|++++|+|++ ++|++|+.|++|++|++..... .......+|...|.+++|+|++..+++++.|++|++||
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 445 79999999976 7999999999999999875421 22345568999999999999995555555679999999
Q ss_pred ccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc----------------eEEec
Q 014302 172 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT----------------PIRRG 235 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~----------------~~~~~ 235 (427)
+. ++ .....+..| ...|.+++|+|+++++.++. .+..|
T Consensus 94 ~~---------~~----------------~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h 147 (319)
T 3frx_A 94 VA---------TG----------------ETYQRFVGH-KSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGH 147 (319)
T ss_dssp TT---------TT----------------EEEEEEECC-SSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCC
T ss_pred CC---------CC----------------CeeEEEccC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEecc
Confidence 97 22 345556666 78899999999998866442 13347
Q ss_pred cCCeEEEEEccC------CCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeC
Q 014302 236 FGGLSILKWSPT------GDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 308 (427)
Q Consensus 236 ~~~v~~~~~sp~------g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~ 308 (427)
...+.+++|+|. +..|++++.|+.|++||+++.+.. .+..|...|.+++|+|+|++|++++. ++.+++|++.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~-dg~i~iwd~~ 226 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK-DGEIMLWNLA 226 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET-TCEEEEEETT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEECC
Confidence 788999999985 448999999999999999887763 44589999999999999999998754 4588888877
Q ss_pred CCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeC--CCC
Q 014302 309 SKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRG--PGD 386 (427)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~--~~~ 386 (427)
.... ...+.....|.+++|+|++.+|+++ .. ..+++|++....++......+ .+ ...
T Consensus 227 ~~~~-------------~~~~~~~~~v~~~~~sp~~~~la~~---~~----~~i~v~~~~~~~~~~~~~~~~-~~~~~~~ 285 (319)
T 3frx_A 227 AKKA-------------MYTLSAQDEVFSLAFSPNRYWLAAA---TA----TGIKVFSLDPQYLVDDLRPEF-AGYSKAA 285 (319)
T ss_dssp TTEE-------------EEEEECCSCEEEEEECSSSSEEEEE---ET----TEEEEEEETTEEEEEEECCCC-TTCCGGG
T ss_pred CCcE-------------EEEecCCCcEEEEEEcCCCCEEEEE---cC----CCcEEEEeCcCeeeeccCccc-cccccCc
Confidence 6421 1122234589999999999999985 22 239999998765543221111 01 011
Q ss_pred CCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 387 NPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 387 ~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
.....+++|.|+ |..|++|..||.|.+|++.
T Consensus 286 ~~~v~~~~~spd---g~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 286 EPHAVSLAWSAD---GQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp CCCEEEEEECTT---SSEEEEEETTSCEEEEEEE
T ss_pred CcceeEEEECCC---CCEEEEeecCceEEEEEEe
Confidence 233668999986 8899999999999999874
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.4e-30 Score=239.68 Aligned_cols=271 Identities=15% Similarity=0.207 Sum_probs=197.5
Q ss_pred ceeeeEE-----cC-CCCEEEEEeCCCeEEEEEccCCCC-----cceeeccCCcCCeeEEEEccCCCceEEEecCCeEEE
Q 014302 101 DLQGVSW-----HQ-HKHIVAFISGSTQVIVRDYEDSGK-----DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICI 169 (427)
Q Consensus 101 ~V~~l~~-----sp-~g~~lat~~~d~~v~vwd~~~~~~-----~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~i 169 (427)
.|++++| ++ ++++||+|+.|++|+|||+..... .......+|...|.+++|+|++..+++++.|+.|++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~l 102 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRL 102 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 7999999 77 899999999999999999976421 233445689999999999999944444556799999
Q ss_pred EeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce---E--------------
Q 014302 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP---I-------------- 232 (427)
Q Consensus 170 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~---~-------------- 232 (427)
||+. ++ .....+..| ...|.+++|+|+|++++++.. +
T Consensus 103 wd~~---------~~----------------~~~~~~~~h-~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 156 (343)
T 2xzm_R 103 WDLR---------TG----------------TTYKRFVGH-QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSA 156 (343)
T ss_dssp EETT---------SS----------------CEEEEEECC-CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECC
T ss_pred EECC---------CC----------------cEEEEEcCC-CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeee
Confidence 9997 11 334445666 788999999999998664421 0
Q ss_pred --EeccCCeEEEEEccCC----------CEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCc
Q 014302 233 --RRGFGGLSILKWSPTG----------DYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSL 300 (427)
Q Consensus 233 --~~~~~~v~~~~~sp~g----------~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~ 300 (427)
..|...+.+++|+|++ .+|++++.|+.|++||........+..|...|.+++|+|+|++|++++. ++
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~-dg 235 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGK-DK 235 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEET-TC
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcC-CC
Confidence 1356779999999987 7899999999999999543323445589999999999999999998754 45
Q ss_pred eeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEE---Eee
Q 014302 301 TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLIS---LSL 377 (427)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~---~~~ 377 (427)
.+++|++...... ...+..+..|.+++|+|++++|+++ . | +.|++|++.+..... +..
T Consensus 236 ~v~iwd~~~~~~~------------~~~~~~~~~v~~v~~sp~~~~la~~---~-d---~~v~iw~~~~~~~~~~~~~~~ 296 (343)
T 2xzm_R 236 KLLIWDILNLTYP------------QREFDAGSTINQIAFNPKLQWVAVG---T-D---QGVKIFNLMTQSKAPVCTIEA 296 (343)
T ss_dssp EEEEEESSCCSSC------------SEEEECSSCEEEEEECSSSCEEEEE---E-S---SCEEEEESSSCCSCSEEECCC
T ss_pred eEEEEECCCCccc------------ceeecCCCcEEEEEECCCCCEEEEE---C-C---CCEEEEEeCCCCCCceEEeec
Confidence 8888887442110 1112233479999999999998773 2 2 349999998765431 110
Q ss_pred e--eeeeC-CCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 378 I--GFIRG-PGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 378 ~--~~~~~-~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
. ..... .+......+++|+|+ |..|++|..||.|.+|++-
T Consensus 297 ~~~~~~~~~~~~~~~v~~~~~sp~---g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 297 EPITKAEGQKGKNPQCTSLAWNAL---GKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp CSGGGBTTBCCSCCCEEEEEECSS---SCCEEEEETTSEEEEEEEE
T ss_pred CcchhhhhhcCCCCceEEEEECCC---CCeEEEecCCceEEEEEEE
Confidence 0 00000 012233568999996 7789999999999999863
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.98 E-value=7.3e-30 Score=234.09 Aligned_cols=263 Identities=14% Similarity=0.217 Sum_probs=197.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++||+++.|+.|+||++... .......+|...|.+++|+|++..+++++.++.|++|++.
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~------- 95 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS------- 95 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-------
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCc--ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC-------
Confidence 7999999999999999999999999998876 4555667899999999999999555555567999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccCCeEEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFGGLSILK 243 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~~v~~~~ 243 (427)
.+ .++..+..| ...|.+++|+|++++++++. .+..|...+.+++
T Consensus 96 --~~----------------~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~ 156 (312)
T 4ery_A 96 --SG----------------KCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVH 156 (312)
T ss_dssp --TC----------------CEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred --CC----------------cEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEE
Confidence 11 334445555 77899999999998865332 1334678899999
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCcccc--ccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Ccccccc
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSEPW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHLL 319 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~--~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~~ 319 (427)
|+|++++|++++.|+.|++||+++++.... ..+...+..++|+|++++|++++. ++.+++|++..... .+.+|..
T Consensus 157 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~ 235 (312)
T 4ery_A 157 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDYSKGKCLKTYTGHKN 235 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET-TTEEEEEETTTTEEEEEECSSCC
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcC-CCeEEEEECCCCcEEEEEEecCC
Confidence 999999999999999999999998876332 256778999999999999998754 45888888766421 1111111
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCC
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKF 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 399 (427)
.. ..+......+++++|++ ++.| |.|++||++++.++.. +.+.. ....+++|+|.
T Consensus 236 ~~-----------~~~~~~~~~~~~~~l~s---g~~d---g~i~vwd~~~~~~~~~-----~~~h~--~~v~~~~~~p~- 290 (312)
T 4ery_A 236 EK-----------YCIFANFSVTGGKWIVS---GSED---NLVYIWNLQTKEIVQK-----LQGHT--DVVISTACHPT- 290 (312)
T ss_dssp SS-----------SCCCEEEECSSSCEEEE---CCTT---SCEEEEETTTCCEEEE-----ECCCS--SCEEEEEECSS-
T ss_pred ce-----------EEEEEEEEeCCCcEEEE---ECCC---CEEEEEECCCchhhhh-----hhccC--CcEEEEeecCc-
Confidence 00 01223333477888988 7777 6799999998876532 22322 23678999996
Q ss_pred CCCceeEEEe--eCceEEEEec
Q 014302 400 KQGPLLSVCW--SSGFCCTYPL 419 (427)
Q Consensus 400 ~~g~~l~v~~--~~g~i~~~~~ 419 (427)
+.+|+.+. .||.|.+|..
T Consensus 291 --~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 291 --ENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp --SSEEEEEECTTTCCEEEEEC
T ss_pred --CCceEEEEccCCccEEEecC
Confidence 66777765 5999999975
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=1.9e-30 Score=244.93 Aligned_cols=284 Identities=13% Similarity=0.131 Sum_probs=200.9
Q ss_pred CCCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEecc
Q 014302 96 LLPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 173 (427)
Q Consensus 96 ~l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~ 173 (427)
.+.+| .|++++|+|++++||+|+.|++|+|||+... ........|...|.+++|+|++..+++++.++.+++|++.
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~--~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS--QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 34566 8999999999999999999999999999877 4555566789999999999999444444456999999986
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCC-CcccC--------------ceE------
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-FPGLG--------------TPI------ 232 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~--------------~~~------ 232 (427)
..... .........+.+| ...+.++.|.|++. .+.++ ..+
T Consensus 139 ~~~~~------------------~~~~~~~~~~~gh-~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~ 199 (380)
T 3iz6_a 139 SQADR------------------DGNMPVSRVLTGH-KGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE 199 (380)
T ss_dssp CCSSC------------------CCSSTTCCBCCCC-SSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC
T ss_pred CCccc------------------cCCccceeeccCC-CcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc
Confidence 21100 0011112234444 66777788887543 22221 111
Q ss_pred --EeccCCeEEEEEcc-CCCEEEEEecCCcEEEEEcCCC-Cc-cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeee
Q 014302 233 --RRGFGGLSILKWSP-TGDYFFAAKFDGTFYLWETNTW-TS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 307 (427)
Q Consensus 233 --~~~~~~v~~~~~sp-~g~~l~~~~~dg~v~iwd~~~~-~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~ 307 (427)
..|...+.+++|++ ++.+|++|+.|+.|++||++.. +. ..+.+|...|.+++|+|+|++|+++ +.++.+++|++
T Consensus 200 ~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~D~~i~lwd~ 278 (380)
T 3iz6_a 200 FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTG-SDDGTCRLFDM 278 (380)
T ss_dssp SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEE-CSSSCEEEEET
T ss_pred cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEE-cCCCeEEEEEC
Confidence 24667899999977 8889999999999999999854 33 3445899999999999999999876 45558888888
Q ss_pred CCCCC--CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCC
Q 014302 308 ASKPP--SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPG 385 (427)
Q Consensus 308 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~ 385 (427)
..... .+..+.. ........|.+++|+|+|++|++ ++.| |.|++||+..++.+... .....+.
T Consensus 279 ~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~s~~g~~l~~---g~~d---g~i~vwd~~~~~~~~~~-~~~~~~h- 343 (380)
T 3iz6_a 279 RTGHQLQVYNREPD-------RNDNELPIVTSVAFSISGRLLFA---GYSN---GDCYVWDTLLAEMVLNL-GTLQNSH- 343 (380)
T ss_dssp TTTEEEEEECCCCS-------SSCCSSCSCSEEEECSSSSEEEE---ECTT---SCEEEEETTTCCEEEEE-CCSCSSC-
T ss_pred CCCcEEEEeccccc-------ccccccCceEEEEECCCCCEEEE---EECC---CCEEEEECCCCceEEEE-ecccCCC-
Confidence 76421 1111100 00011125899999999999999 6666 66999999887765221 0111122
Q ss_pred CCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 386 DNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 386 ~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
.....+++|.|+ |..|+.|..||.|.+|++-
T Consensus 344 -~~~v~~l~~s~d---g~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 344 -EGRISCLGLSSD---GSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp -CCCCCEEEECSS---SSEEEEECTTSCEEEEECC
T ss_pred -CCceEEEEECCC---CCEEEEeeCCCCEEEEecC
Confidence 223668999986 7889999999999999974
No 15
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.98 E-value=9.8e-30 Score=235.01 Aligned_cols=265 Identities=13% Similarity=0.147 Sum_probs=202.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCc-cee--eccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKD-ACI--LTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~-~~~--~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~ 177 (427)
.|++++|+|++++|++++ |+.|++|++...... ... ....|...|.+++|+|++..+++++.++.|++|++..
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~--- 128 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA--- 128 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC---
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCC---
Confidence 789999999999999998 999999999876221 111 1226888999999999995455555669999999971
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccCCeE
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFGGLS 240 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~~v~ 240 (427)
........+..+ ...+.+++|+|+++++..+. .+..|...+.
T Consensus 129 --------------------~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~ 187 (337)
T 1gxr_A 129 --------------------PTPRIKAELTSS-APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGAS 187 (337)
T ss_dssp --------------------C--EEEEEEECS-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred --------------------CCcceeeecccC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceE
Confidence 111233334444 67899999999998754331 1334778899
Q ss_pred EEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccc
Q 014302 241 ILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLP 320 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 320 (427)
+++|+|++++|++++.|+.|++||+++.+......+...+.+++|+|+++++++++.+ +.+++|++.....
T Consensus 188 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-~~i~~~~~~~~~~-------- 258 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMES-SNVEVLHVNKPDK-------- 258 (337)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETT-SCEEEEETTSSCE--------
T ss_pred EEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCC-CcEEEEECCCCCe--------
Confidence 9999999999999999999999999988876666788899999999999999987554 4788888766421
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCC
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFK 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 400 (427)
.....+...|.+++|+|++++|++ ++.| |.|++||+.++..+... . ......+++|.|+
T Consensus 259 -----~~~~~~~~~v~~~~~~~~~~~l~~---~~~d---g~i~~~~~~~~~~~~~~------~--~~~~v~~~~~s~~-- 317 (337)
T 1gxr_A 259 -----YQLHLHESCVLSLKFAYCGKWFVS---TGKD---NLLNAWRTPYGASIFQS------K--ESSSVLSCDISVD-- 317 (337)
T ss_dssp -----EEECCCSSCEEEEEECTTSSEEEE---EETT---SEEEEEETTTCCEEEEE------E--CSSCEEEEEECTT--
T ss_pred -----EEEcCCccceeEEEECCCCCEEEE---ecCC---CcEEEEECCCCeEEEEe------c--CCCcEEEEEECCC--
Confidence 111234458999999999999998 4555 67999999988765221 1 1223668899886
Q ss_pred CCceeEEEeeCceEEEEeccc
Q 014302 401 QGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 401 ~g~~l~v~~~~g~i~~~~~~~ 421 (427)
+..|+++..+|.|.+|++.|
T Consensus 318 -~~~l~~~~~dg~i~iw~~~~ 337 (337)
T 1gxr_A 318 -DKYIVTGSGDKKATVYEVIY 337 (337)
T ss_dssp -SCEEEEEETTSCEEEEEEEC
T ss_pred -CCEEEEecCCCeEEEEEEeC
Confidence 77899999999999999876
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.4e-29 Score=239.98 Aligned_cols=275 Identities=14% Similarity=0.168 Sum_probs=196.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccC------------------CcCCeeEEEEccCCCceEEEe
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSD------------------SQRDVKVLEWRPNGGRSLSVG 162 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~------------------~~~~v~~l~~sp~~~~~la~g 162 (427)
.|++++|+|+|++||+|+ +++++||++..+ ........ +...|++++|+|++..+++++
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~ 142 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDG--SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 142 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTC--CEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCC--CEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc
Confidence 799999999999999986 789999999876 22222222 223489999999995444445
Q ss_pred cCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce-----------
Q 014302 163 CKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP----------- 231 (427)
Q Consensus 163 ~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~----------- 231 (427)
.++.|++||+. .+ .....+..| ...|.+++|+|+++++.++..
T Consensus 143 ~d~~i~iwd~~---------~~----------------~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 143 EDRLIRIWDIE---------NR----------------KIVMILQGH-EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp TTSCEEEEETT---------TT----------------EEEEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCeEEEEECC---------CC----------------cEEEEEccC-CCCEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 56999999997 11 344556666 788999999999988654321
Q ss_pred ---E--EeccCCeEEEEEcc-CCCEEEEEecCCcEEEEEcCCCCccc-c-------ccCCCCeeEEEECCCCCEEEEEEc
Q 014302 232 ---I--RRGFGGLSILKWSP-TGDYFFAAKFDGTFYLWETNTWTSEP-W-------SSTSGFVTGATWDPEGRMILLAFA 297 (427)
Q Consensus 232 ---~--~~~~~~v~~~~~sp-~g~~l~~~~~dg~v~iwd~~~~~~~~-~-------~~~~~~v~~v~~spdg~~l~~~~~ 297 (427)
. ..+...+.+++|+| ++++|++++.|+.|++||++++.... + ..|...|.+++|+|+|++|++++
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s- 275 (393)
T 1erj_A 197 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS- 275 (393)
T ss_dssp TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE-
T ss_pred CeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe-
Confidence 1 12456799999999 89999999999999999998876522 1 36888999999999999998775
Q ss_pred CCceeeeeeeCCCCCCccccccccccc-cceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEe
Q 014302 298 GSLTLGSIHFASKPPSLDAHLLPVDLP-DIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLS 376 (427)
Q Consensus 298 ~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~ 376 (427)
.++.+++|++.......... .+.... ......+...|.+++|+|++++|++ ++.| ++|++||++++..+.
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s---gs~D---~~v~iwd~~~~~~~~-- 346 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSK-TPNSGTCEVTYIGHKDFVLSVATTQNDEYILS---GSKD---RGVLFWDKKSGNPLL-- 346 (393)
T ss_dssp TTSEEEEEEC----------------CEEEEEECCSSCEEEEEECGGGCEEEE---EETT---SEEEEEETTTCCEEE--
T ss_pred CCCEEEEEECCCCCCccccc-CCCCCcceEEEecccCcEEEEEECCCCCEEEE---EeCC---CeEEEEECCCCeEEE--
Confidence 45588888886532110000 000000 0122335568999999999999998 6666 679999999887652
Q ss_pred eeeeeeCCCCCCCceeEEeccCC---CCCceeEEEeeCceEEEEec
Q 014302 377 LIGFIRGPGDNPKPVAFSFHDKF---KQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~f~~~~---~~g~~l~v~~~~g~i~~~~~ 419 (427)
.+.+... ...+++|.+.. ..+.+|+.|..||.|.+|++
T Consensus 347 ---~l~~h~~--~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 347 ---MLQGHRN--SVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp ---EEECCSS--CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred ---EECCCCC--CEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 2333332 35688887742 24678999999999999986
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=233.33 Aligned_cols=280 Identities=14% Similarity=0.252 Sum_probs=189.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeec-cC-CcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILT-SD-SQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~-~~-~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~ 177 (427)
.|.+++|+|+ +||+|+.|++|+||++........... .. |...|.+++|+|++ .+|+++ .|+.|+||++.....
T Consensus 16 ~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 16 KIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp CEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC-----
T ss_pred ceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcC
Confidence 7999999998 999999999999999986522222222 34 99999999999999 555555 569999999851100
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc---------------------eEEecc
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT---------------------PIRRGF 236 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~---------------------~~~~~~ 236 (427)
..........+.+| ...|.+++|+|+|++++++. .+..|.
T Consensus 93 ------------------~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~ 153 (330)
T 2hes_X 93 ------------------RTFEMDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS 153 (330)
T ss_dssp --------------------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS
T ss_pred ------------------ccccceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC
Confidence 00012344456666 78899999999999865331 133477
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCC--c-cccccCCCCeeEEEECCC--CCEEEEEEcCCceeeeeeeCCCC
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWT--S-EPWSSTSGFVTGATWDPE--GRMILLAFAGSLTLGSIHFASKP 311 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~--~-~~~~~~~~~v~~v~~spd--g~~l~~~~~~~~~i~~~~~~~~~ 311 (427)
..|.+++|+|++++|++++.|++|++||+.... + ..+..|...|.+++|+|+ +.+|++++ .++.+++|++....
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~D~~v~iw~~~~~~ 232 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS-DDSTVRVWKYMGDD 232 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE-TTSCEEEEEEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe-CCCeEEEEEecCCC
Confidence 889999999999999999999999999987663 3 334489999999999998 66777664 55588888876531
Q ss_pred CCccccccccccccceee--ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCC
Q 014302 312 PSLDAHLLPVDLPDIVSL--TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPK 389 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
...... ......+ .+...|.+++|++++ +||+ ++.| |+|+||+..++...... ....+... ..
T Consensus 233 ~~~~~~-----~~~~~~~~~~h~~~v~~v~~s~~~-~l~s---~~~d---g~v~iw~~~~~~~~~~~--~~~~~h~~-~~ 297 (330)
T 2hes_X 233 EDDQQE-----WVCEAILPDVHKRQVYNVAWGFNG-LIAS---VGAD---GVLAVYEEVDGEWKVFA--KRALCHGV-YE 297 (330)
T ss_dssp TTSCEE-----EEEEEECCSCCSSCEEEEEECTTS-CEEE---EETT---SCEEEEEEETTEEEEEE--EESCTTTT-SC
T ss_pred ccccce-----eEEeeecccccccceEEEEEcCCC-EEEE---EeCC---CEEEEEEcCCCceEEEe--cccccccc-ce
Confidence 100000 0001111 145689999999766 6777 4555 67999999876421110 01111111 13
Q ss_pred ceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 390 PVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 390 ~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
..+++|.|. .++.+|+.|..||.|.+|++
T Consensus 298 v~~v~~~~~-~~~~~las~s~Dg~v~~W~~ 326 (330)
T 2hes_X 298 INVVKWLEL-NGKTILATGGDDGIVNFWSL 326 (330)
T ss_dssp EEEEEEC------CCEEEEETTSEEEEEEC
T ss_pred EEEEEEecC-CCceEEEEecCCCcEEEEEe
Confidence 568899884 23678999999999999986
No 18
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=5.2e-29 Score=226.89 Aligned_cols=252 Identities=14% Similarity=0.190 Sum_probs=181.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEe-cCCeEEEEeccCCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVG-CKGGICIWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g-~~~~i~iw~~~~~~~ 177 (427)
.|++++|+|+|++||+|+.|++|+||++............+|...|++++|+|+ + .+|+++ .|++|++|++.
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~v~iWd~~---- 85 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVMIWKEE---- 85 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTTEEEEEEBS----
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCCCEEEEEEcC----
Confidence 799999999999999999999999999976433445566789999999999864 6 555555 56999999997
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC--CCEEEEEe
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT--GDYFFAAK 255 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~ 255 (427)
.+ .+... ..+..|...|.+++|+|+ |.+|++++
T Consensus 86 -----~~--------------~~~~~--------------------------~~~~~h~~~v~~v~~~p~~~g~~l~s~s 120 (297)
T 2pm7_B 86 -----NG--------------RWSQI--------------------------AVHAVHSASVNSVQWAPHEYGPMLLVAS 120 (297)
T ss_dssp -----SS--------------CBCCC--------------------------EEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred -----CC--------------ceEEE--------------------------EEeecCCCceeEEEeCcCCCCcEEEEEE
Confidence 11 00000 022346678999999997 88999999
Q ss_pred cCCcEEEEEcCCCCc---cccccCCCCeeEEEECCC-------------CCEEEEEEcCCceeeeeeeCCCCCCcccccc
Q 014302 256 FDGTFYLWETNTWTS---EPWSSTSGFVTGATWDPE-------------GRMILLAFAGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 256 ~dg~v~iwd~~~~~~---~~~~~~~~~v~~v~~spd-------------g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
.|+.|++||++.... ..+..|...|.+++|+|+ +++|++++ .++.+++|++........ .
T Consensus 121 ~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs-~D~~v~lwd~~~~~~~~~---~ 196 (297)
T 2pm7_B 121 SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYV---L 196 (297)
T ss_dssp TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEE-TTSCEEEEEEETTTTEEE---E
T ss_pred CCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc-CCCcEEEEEEcCCCceEE---E
Confidence 999999999987642 233488999999999997 46787765 555888998876421100 0
Q ss_pred ccccccceeeccCCceeEEEECCCC---CEEEEEEecCCCcceeEEEEEEeccCce-EEEeeeeeeeCCCCCCCceeEEe
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASG---ERLAVSYKGGDDIYKGLIAIYDARRTPL-ISLSLIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g---~~La~~~~~~~d~~~g~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f 395 (427)
......|...|.+++|+|++ ++||+ ++.| ++|+|||++.... .... .+..........+++|
T Consensus 197 -----~~~l~~H~~~V~~v~~sp~~~~~~~las---~s~D---~~v~iWd~~~~~~~~~~~---~~~~~~~~~~v~~~~~ 262 (297)
T 2pm7_B 197 -----ESTLEGHSDWVRDVAWSPTVLLRSYMAS---VSQD---RTCIIWTQDNEQGPWKKT---LLKEEKFPDVLWRASW 262 (297)
T ss_dssp -----EEEECCCSSCEEEEEECCCCSSSEEEEE---EETT---SCEEEEEESSTTSCCEEE---ESSSSCCSSCEEEEEE
T ss_pred -----EEEecCCCCceEEEEECCCCCCceEEEE---EECC---CcEEEEEeCCCCCcccee---eeecccCCCcEEEEEE
Confidence 00111244589999999995 78888 5666 6699999976431 0000 1111112233668999
Q ss_pred ccCCCCCceeEEEeeCceEEEEeccccC
Q 014302 396 HDKFKQGPLLSVCWSSGFCCTYPLIFRS 423 (427)
Q Consensus 396 ~~~~~~g~~l~v~~~~g~i~~~~~~~~~ 423 (427)
.|+ |.+|+++..||.|.+|+.-..+
T Consensus 263 s~~---g~~las~~~D~~v~lw~~~~~g 287 (297)
T 2pm7_B 263 SLS---GNVLALSGGDNKVTLWKENLEG 287 (297)
T ss_dssp CSS---SCCEEEEETTSCEEEEEECTTS
T ss_pred CCC---CCEEEEEcCCCcEEEEEECCCC
Confidence 986 7789999999999999876554
No 19
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=6.3e-29 Score=234.57 Aligned_cols=276 Identities=15% Similarity=0.142 Sum_probs=193.8
Q ss_pred ceeeeEEcCCC-CEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEcc-CCCceEEEe-cCCeEEEEeccCCCC
Q 014302 101 DLQGVSWHQHK-HIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRP-NGGRSLSVG-CKGGICIWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~sp~g-~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~la~g-~~~~i~iw~~~~~~~ 177 (427)
.|++++|+|++ ++||+|+.|+.|+|||+............+|...|.+++|+| ++ .+|+++ .++.|++|++.
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~---- 149 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT-NQLFVSSIRGATTLRDFS---- 149 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE-EEEEEEETTTEEEEEETT----
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC-CEEEEEeCCCEEEEEECC----
Confidence 79999999999 899999999999999998773333333346999999999999 55 555555 56999999997
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc----------------eEEeccCCeEE
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT----------------PIRRGFGGLSI 241 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~----------------~~~~~~~~v~~ 241 (427)
+........... ....|.+++|+|++++++.+. .+..|...|.+
T Consensus 150 -------------------~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~ 209 (383)
T 3ei3_B 150 -------------------GSVIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTH 209 (383)
T ss_dssp -------------------SCEEEEEECCCC-SSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEE
T ss_pred -------------------CCceEEEeccCC-CCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEE
Confidence 111122221122 247799999999999866432 23457889999
Q ss_pred EEEccCCC-EEEEEecCCcEEEEEcCCCC----ccccccCCCCeeEEEECC-CCCEEEEEEcCCceeeeeeeCCCCC--C
Q 014302 242 LKWSPTGD-YFFAAKFDGTFYLWETNTWT----SEPWSSTSGFVTGATWDP-EGRMILLAFAGSLTLGSIHFASKPP--S 313 (427)
Q Consensus 242 ~~~sp~g~-~l~~~~~dg~v~iwd~~~~~----~~~~~~~~~~v~~v~~sp-dg~~l~~~~~~~~~i~~~~~~~~~~--~ 313 (427)
++|+|+++ +|++++.|+.|++||+++.+ ......|...|.+++|+| ++++|++++. ++.+++|++..... .
T Consensus 210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQ-RNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEES-SSEEEEEETTBTTSCSE
T ss_pred EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcC-CCcEEEEECCCCccccc
Confidence 99999999 88999999999999999843 333347999999999999 9999997754 45888888876422 2
Q ss_pred ccccccccc--ccc-ceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCc
Q 014302 314 LDAHLLPVD--LPD-IVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKP 390 (427)
Q Consensus 314 ~~~~~~~~~--~~~-~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 390 (427)
+.+|..... ... .......+.+..++|+|+|++ + ++.| +.|+|||+.++.++.. +.+.......
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s---~s~d---~~i~iwd~~~~~~~~~-----l~~~~~~~~~ 355 (383)
T 3ei3_B 289 IIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--L---LNDK---RTIDIYDANSGGLVHQ-----LRDPNAAGII 355 (383)
T ss_dssp EEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--C---TTCC---CCEEEEETTTCCEEEE-----ECBTTBCSCC
T ss_pred cccccccccccccceEEeccCCCCceEEEecCCccc--c---cCCC---CeEEEEecCCCceeee-----ecCCCCCceE
Confidence 222221110 000 001111234555666666666 3 6666 6799999998887532 2232222223
Q ss_pred eeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 391 VAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 391 ~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
.+++|.|+ +.+|++| +||.|.+|++
T Consensus 356 ~~~~~s~~---g~~l~s~-sd~~i~iw~~ 380 (383)
T 3ei3_B 356 SLNKFSPT---GDVLASG-MGFNILIWNR 380 (383)
T ss_dssp CEEEECTT---SSEEEEE-ETTEEEEEEC
T ss_pred EEEEEecC---ccEEEEe-cCCcEEEEec
Confidence 45699986 7788888 5999999986
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=4.4e-29 Score=248.41 Aligned_cols=285 Identities=17% Similarity=0.256 Sum_probs=196.1
Q ss_pred CCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEecc
Q 014302 97 LPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPS 173 (427)
Q Consensus 97 l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~ 173 (427)
|++| .|++++|||||++||+|+.|++|+|||... +......+|...|++++|+||+ ++|+++ .++.|+|||+.
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~---~~~~~l~gh~~~V~~l~fspdg-~~las~~~d~~i~vWd~~ 87 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRN 87 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS---CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETT
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC---CEEEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEECC
Confidence 4566 799999999999999999999999999643 3555667899999999999999 555555 56999999964
Q ss_pred CCCCccccccCcccccc--cccCC----------CC------------------cce-----------------------
Q 014302 174 YPGNAASVRSGAASFLG--ALSRG----------PG------------------TRW----------------------- 200 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~--~~~~~----------~~------------------~~~----------------------- 200 (427)
+.......+...... .+..+ +. ...
T Consensus 88 --~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 165 (577)
T 2ymu_A 88 --GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKL 165 (577)
T ss_dssp --SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred --CCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceec
Confidence 211111000000000 00000 00 000
Q ss_pred -----eEeehhcccCCCceeeeEeCCCCCCcccCc----------------eEEeccCCeEEEEEccCCCEEEEEecCCc
Q 014302 201 -----TLVDFLRSQNGEQITALSWGPDGRFPGLGT----------------PIRRGFGGLSILKWSPTGDYFFAAKFDGT 259 (427)
Q Consensus 201 -----~~~~~~~~~~~~~v~~~~~spdg~~l~~~~----------------~~~~~~~~v~~~~~sp~g~~l~~~~~dg~ 259 (427)
....... .....+.++.|+|+|++++++. .+..|...+.+++|+|++++|++++.|+.
T Consensus 166 ~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 244 (577)
T 2ymu_A 166 WNRNGQLLQTLT-GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 244 (577)
T ss_dssp ECTTSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred cccceeeeeecc-CCCcceeeeeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 0000011 1244566778888887754331 23457789999999999999999999999
Q ss_pred EEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEE
Q 014302 260 FYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIA 339 (427)
Q Consensus 260 v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 339 (427)
|++||........+..|...|.+++|+|+++.|++++.+ +.+++|+...... .....+...|.+++
T Consensus 245 i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d-~~i~~w~~~~~~~-------------~~~~~h~~~v~~~~ 310 (577)
T 2ymu_A 245 VKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDD-KTVKLWNRNGQLL-------------QTLTGHSSSVWGVA 310 (577)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEETTSCEE-------------EEECCCSSCEEEEE
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-CEEEEEeCCCcEE-------------EEEecCCCCeEEEE
Confidence 999997544345555899999999999999999987554 4777777533210 01112345899999
Q ss_pred ECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 340 WDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 340 ~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
|+|++++|++ ++.| ++|++||+....+..+ .+. .....+++|.|+ |..|++|..+|.|.+|+.
T Consensus 311 ~~~~~~~l~t---~~~d---~~i~~w~~~~~~~~~~------~~~--~~~v~~~~~s~~---g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 311 FSPDGQTIAS---ASDD---KTVKLWNRNGQHLQTL------TGH--SSSVWGVAFSPD---GQTIASASDDKTVKLWNR 373 (577)
T ss_dssp ECTTSSEEEE---EETT---SCEEEEETTSCEEEEE------CCC--SSCEEEEEECTT---SSEEEEEETTSEEEEEET
T ss_pred ECCCCCEEEE---EeCC---CeEEEEeCCCCeeEEE------eCC--CCCEEEEEECCC---CCEEEEEeCCCEEEEEcC
Confidence 9999999998 4455 6699999876554322 222 223668999886 788999999999999984
No 21
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=3.3e-29 Score=240.77 Aligned_cols=274 Identities=14% Similarity=0.144 Sum_probs=186.9
Q ss_pred ceeeeEEcCC-CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQH-KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~-g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~ 178 (427)
.|++|+|||. +.+||+|+.||+|+|||+............+|...|++|+|+|.+..+|+++ .|++|++||+.
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~----- 195 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK----- 195 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT-----
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc-----
Confidence 6999999995 5699999999999999998774444445567999999999999533555555 56999999987
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc----------------eEEeccCCeEEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT----------------PIRRGFGGLSIL 242 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~----------------~~~~~~~~v~~~ 242 (427)
.+ ......... .....+.+++|+|++++++++. .+..|...|.++
T Consensus 196 ----~~--------------~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v 256 (435)
T 4e54_B 196 ----GN--------------ILRVFASSD-TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHV 256 (435)
T ss_dssp ----SC--------------EEEEEECCS-SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEE
T ss_pred ----CC--------------ceeEEeccC-CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEee
Confidence 11 111111111 1244567889999988865432 134578899999
Q ss_pred EEccCCC-EEEEEecCCcEEEEEcCCCCccc----cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Ccc
Q 014302 243 KWSPTGD-YFFAAKFDGTFYLWETNTWTSEP----WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLD 315 (427)
Q Consensus 243 ~~sp~g~-~l~~~~~dg~v~iwd~~~~~~~~----~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~ 315 (427)
+|+|+++ +|++++.|+.|++||+++.+... ...|...|.+++|+|+|++|++++. ++.+++|++.+... .+.
T Consensus 257 ~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~-D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 257 ALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ-KSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp EECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES-SSCEEEEESSSSSSEEEEC
T ss_pred eecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC-CCEEEEEECCCCccceEEe
Confidence 9999987 56699999999999998876532 2378999999999999999998754 55888888876422 111
Q ss_pred ccccccccccceeeccCCceeEEEECCCCCEEEEEEe---------cCCCcceeEEEEEEeccCceEEEeeeeeeeCCCC
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYK---------GGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGD 386 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~---------~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~ 386 (427)
.|.... .....+..+.|+|++.++++++. +.++ +.|++||+.++.++.... ....
T Consensus 336 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~i~iwd~~~g~~~~~l~-----~~~~ 399 (435)
T 4e54_B 336 PHPHRH--------FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYEL---RTIDVFDGNSGKMMCQLY-----DPES 399 (435)
T ss_dssp CCCCCC--------CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCC---CCEEEECSSSCCEEEEEC-----CSSC
T ss_pred cccccc--------cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCC---CEEEEEECCCCcEEEEEe-----CCCC
Confidence 111100 00012234456666666555321 2222 569999999988763321 1111
Q ss_pred CCCceeE-EeccCCCCCceeEEEeeCceEEEEecc
Q 014302 387 NPKPVAF-SFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 387 ~~~~~~~-~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
....++ +|+|+ |.+|+.| +++.|.+|++.
T Consensus 400 -~~v~s~~~fspd---g~~lasg-~d~~i~iW~~~ 429 (435)
T 4e54_B 400 -SGISSLNEFNPM---GDTLASA-MGYHILIWSQQ 429 (435)
T ss_dssp -CCCCCEEEECTT---SSCEEEE-CSSEEEECCCC
T ss_pred -CcEEEEEEECCC---CCEEEEE-cCCcEEEEECC
Confidence 123344 69886 7788887 58999999863
No 22
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.9e-28 Score=227.05 Aligned_cols=266 Identities=11% Similarity=0.086 Sum_probs=200.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++++.|+.|+|||+... ........|...|.+++|+|++..+++++.++.|++|++.
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~------- 104 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS------- 104 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT-------
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-------
Confidence 7999999999999999999999999999877 5556667899999999999999555555567999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------e---------------------
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------P--------------------- 231 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------~--------------------- 231 (427)
.+ .....+. ....+.+++|+|+++++..+. .
T Consensus 105 --~~----------------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~ 164 (369)
T 3zwl_B 105 --NG----------------QCVATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEE 164 (369)
T ss_dssp --TC----------------CEEEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSS
T ss_pred --CC----------------cEEEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccc
Confidence 11 2233333 367899999999998755321 0
Q ss_pred ----EEeccC--CeEEEEEccCCCEEEEEecCCcEEEEEcCCC-Cc-cccccCCCCeeEEEECCCCCEEEEEEcCCceee
Q 014302 232 ----IRRGFG--GLSILKWSPTGDYFFAAKFDGTFYLWETNTW-TS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLG 303 (427)
Q Consensus 232 ----~~~~~~--~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~-~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~ 303 (427)
+..+.. .+.+++|+|++++|++++.||.|++||+++. +. ..+..|...|.+++|+|++++|++++. ++.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~ 243 (369)
T 3zwl_B 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR-DTNSF 243 (369)
T ss_dssp CSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET-TSEEE
T ss_pred eeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC-CceEE
Confidence 111222 8999999999999999999999999999983 43 334478899999999999999988754 44888
Q ss_pred eeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC--------cceeEEEEEEeccCceEEE
Q 014302 304 SIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD--------IYKGLIAIYDARRTPLISL 375 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d--------~~~g~i~vwd~~~~~~~~~ 375 (427)
+|++..... ...+.....+..++|+|++++|+++...+.. .....|++||+.++..+..
T Consensus 244 v~d~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 244 LVDVSTLQV-------------LKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp EEETTTCCE-------------EEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE
T ss_pred EEECCCCce-------------eeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh
Confidence 888765421 1122244589999999999999995322100 0001699999988876532
Q ss_pred eeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 376 SLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
+.+.. ....+++|.|+ +.+|+++..||.|.+|++
T Consensus 311 -----~~~~~--~~v~~~~~s~~---~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 311 -----VQGHF--GPLNTVAISPQ---GTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp -----EECCS--SCEEEEEECTT---SSEEEEEETTSEEEEEEE
T ss_pred -----eeccc--CcEEEEEECCC---CCEEEEEcCCCeEEEEEC
Confidence 22322 23668999985 778999999999999986
No 23
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=2e-29 Score=232.22 Aligned_cols=220 Identities=18% Similarity=0.285 Sum_probs=173.4
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~ 179 (427)
.|.+++|+|++.++++++.|++|+|||+..+ ........|...+.+++|+|++ .+|+++ .++.+++|++.
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~--~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~------ 152 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLDAHIRLWDLENG--KQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVE------ 152 (321)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETT------
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCC--CEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcC------
Confidence 7999999999999999999999999999877 4455556677889999999999 455555 55999999997
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------------e---EEeccCCeEEE
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------------P---IRRGFGGLSIL 242 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------~---~~~~~~~v~~~ 242 (427)
.+ .....+..+ ...+.+++|+|+|++++.+. . +..|...|.++
T Consensus 153 ---~~----------------~~~~~~~~~-~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 212 (321)
T 3ow8_A 153 ---SG----------------KKEYSLDTR-GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 212 (321)
T ss_dssp ---TC----------------SEEEEEECS-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEE
T ss_pred ---CC----------------ceeEEecCC-CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEE
Confidence 11 122223333 66799999999999866432 1 34477889999
Q ss_pred EEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccc
Q 014302 243 KWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPV 321 (427)
Q Consensus 243 ~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 321 (427)
+|+|++++|++++.|+.|++||+++.+.. .+..|...|.+++|+|++++|++++. ++.+++|++......
T Consensus 213 ~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~-D~~v~iwd~~~~~~~-------- 283 (321)
T 3ow8_A 213 TFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDVGTRTCV-------- 283 (321)
T ss_dssp EECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTTEEE--------
T ss_pred EEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeC-CCcEEEEeCCCCEEE--------
Confidence 99999999999999999999999987764 44589999999999999999998755 458888887654210
Q ss_pred ccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 322 DLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 322 ~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
.....+.+.|.+++|+|+|++|++ ++.| ++|+|||..
T Consensus 284 ----~~~~~h~~~v~~v~~s~~g~~l~s---~~~d---~~i~vwd~p 320 (321)
T 3ow8_A 284 ----HTFFDHQDQVWGVKYNGNGSKIVS---VGDD---QEIHIYDCP 320 (321)
T ss_dssp ----EEECCCSSCEEEEEECTTSSEEEE---EETT---CCEEEEECC
T ss_pred ----EEEcCCCCcEEEEEECCCCCEEEE---EeCC---CeEEEEeCC
Confidence 111224458999999999999998 5556 669999963
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=3.2e-28 Score=225.37 Aligned_cols=273 Identities=12% Similarity=0.177 Sum_probs=196.9
Q ss_pred CCCC--ceeeeEEcCC-CCEEEEEeCCCeEEEEEccCCCC---cceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEE
Q 014302 97 LPEV--DLQGVSWHQH-KHIVAFISGSTQVIVRDYEDSGK---DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIW 170 (427)
Q Consensus 97 l~~~--~V~~l~~sp~-g~~lat~~~d~~v~vwd~~~~~~---~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw 170 (427)
|.+| .|++|+|+|+ +++||+|+.|++|+|||+..... .......+|...|.+++|+|++..+++++.++.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 4566 8999999998 57999999999999999987622 2334456799999999999999555555567999999
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce------------------E
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP------------------I 232 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~------------------~ 232 (427)
+... . ........+ ...+....++++++++.++.. .
T Consensus 114 ~~~~---------~----------------~~~~~~~~~-~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~ 167 (340)
T 4aow_A 114 DLTT---------G----------------TTTRRFVGH-TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 167 (340)
T ss_dssp ETTT---------T----------------EEEEEEECC-SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred eecc---------c----------------ceeeeecCC-CCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEe
Confidence 9871 1 112222222 556667777777776543311 1
Q ss_pred EeccCCeEEEEEccCC--CEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 233 RRGFGGLSILKWSPTG--DYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 233 ~~~~~~v~~~~~sp~g--~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
..|...+..++|++++ .++++++.|+.|++||+++.+.. .+..|...|.+++|+|++++|++++. ++.+++|++..
T Consensus 168 ~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-Dg~i~iwd~~~ 246 (340)
T 4aow_A 168 ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK-DGQAMLWDLNE 246 (340)
T ss_dssp SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-TCEEEEEETTT
T ss_pred ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC-CCeEEEEEecc
Confidence 2356789999998876 46779999999999999988774 44589999999999999999998754 45888887765
Q ss_pred CCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeee--CCCCC
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIR--GPGDN 387 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~--~~~~~ 387 (427)
... ...+.++..|..++|+|++.+++.+ . | +.|++||++.+.++......... .....
T Consensus 247 ~~~-------------~~~~~~~~~v~~~~~~~~~~~~~~~---~-d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~ 306 (340)
T 4aow_A 247 GKH-------------LYTLDGGDIINALCFSPNRYWLCAA---T-G---PSIKIWDLEGKIIVDELKQEVISTSSKAEP 306 (340)
T ss_dssp TEE-------------EEEEECSSCEEEEEECSSSSEEEEE---E-T---TEEEEEETTTTEEEEEECCC-------CCC
T ss_pred Cce-------------eeeecCCceEEeeecCCCCceeecc---C-C---CEEEEEECCCCeEEEeccccceeeeccCCC
Confidence 411 1223345589999999999877663 2 3 56999999887665432211111 11233
Q ss_pred CCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 388 PKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 388 ~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
....+++|.|+ |..|++|..||.|.+|++
T Consensus 307 ~~v~~l~~s~d---g~~l~sgs~Dg~v~iW~~ 335 (340)
T 4aow_A 307 PQCTSLAWSAD---GQTLFAGYTDNLVRVWQV 335 (340)
T ss_dssp CCEEEEEECTT---SSEEEEEETTSCEEEEEE
T ss_pred CCEEEEEECCC---CCEEEEEeCCCEEEEEeC
Confidence 44678999986 778999999999999986
No 25
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=3.3e-29 Score=232.71 Aligned_cols=227 Identities=15% Similarity=0.171 Sum_probs=164.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcc--eeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDA--CILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.|++++|+|++ .|++|+.||+|+|||+..+.... .....+|...|++++|+|++..+++++.++.|++||+.
T Consensus 84 ~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~----- 157 (344)
T 4gqb_B 84 GVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA----- 157 (344)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----
T ss_pred CEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-----
Confidence 69999999986 67799999999999998873222 22345799999999999999444444456999999997
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCC-cccC--------------ceE-----EeccCC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRF-PGLG--------------TPI-----RRGFGG 238 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~--------------~~~-----~~~~~~ 238 (427)
++ .++..+.+| ...|.+++|+|++.. ++++ ... ..+...
T Consensus 158 ----~~----------------~~~~~~~~h-~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~ 216 (344)
T 4gqb_B 158 ----QQ----------------VVLSSYRAH-AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYL 216 (344)
T ss_dssp ----TT----------------EEEEEECCC-SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCC
T ss_pred ----CC----------------cEEEEEcCc-CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeecc
Confidence 22 456667776 889999999999864 3322 111 123456
Q ss_pred eEEEEEccCC-CEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCC-EEEEEEcCCceeeeeeeCCCCCCcc
Q 014302 239 LSILKWSPTG-DYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 239 v~~~~~sp~g-~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~-~l~~~~~~~~~i~~~~~~~~~~~~~ 315 (427)
+.+++|+|++ ++|++|+.||.|++||++++++. .+..|...|.+++|+|+|. +|+++ +.++.+++|++.....
T Consensus 217 ~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg-s~D~~i~vwd~~~~~~--- 292 (344)
T 4gqb_B 217 PTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASL-SEDCSLAVLDSSLSEL--- 292 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEE-ETTSCEEEECTTCCEE---
T ss_pred ceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEE-eCCCeEEEEECCCCcE---
Confidence 8899999965 57789999999999999988874 4558999999999999985 56555 5566888887655311
Q ss_pred ccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.....|.+.|++|+|+|+++.|+++ ++.| ++|++|++.+.++.
T Consensus 293 ----------~~~~~H~~~V~~v~~sp~~~~llas--~s~D---~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 293 ----------FRSQAHRDFVRDATWSPLNHSLLTT--VGWD---HQVVHHVVPTEPLP 335 (344)
T ss_dssp ----------EEECCCSSCEEEEEECSSSTTEEEE--EETT---SCEEEEECCC----
T ss_pred ----------EEEcCCCCCEEEEEEeCCCCeEEEE--EcCC---CeEEEEECCCCCCC
Confidence 1112345689999999999765433 5666 67999999876543
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=1e-28 Score=245.80 Aligned_cols=256 Identities=17% Similarity=0.281 Sum_probs=197.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~ 179 (427)
.|.+++|+|++++|++++.|++|++|++... .......|...|.+++|+|++ .+|+++ .++.+++|+..
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~---~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~------ 374 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQ---HLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRN------ 374 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSC---EEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT------
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCC---eeEEEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCC------
Confidence 7999999999999999999999999998755 444556789999999999999 555555 55899999965
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc----------------eEEeccCCeEEEE
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT----------------PIRRGFGGLSILK 243 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~----------------~~~~~~~~v~~~~ 243 (427)
+ ..+..+..| ...|.+++|+|||++++.+. .+..|...|.+++
T Consensus 375 -----------------~---~~~~~~~~~-~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 375 -----------------G---QLLQTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVA 433 (577)
T ss_dssp -----------------C---CEEEEEECC-SSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEE
T ss_pred -----------------C---CEEEEecCC-CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEE
Confidence 1 223344555 77899999999999876432 2345788999999
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccc
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDL 323 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (427)
|+|++++|++++.|+.|++||........+..|...|.+++|+|++++|++++. ++.+++|+...+. .
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~-d~~i~iw~~~~~~-------~---- 501 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD-DKTVKLWNRNGQL-------L---- 501 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSCE-------E----
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-CCEEEEEcCCCCE-------E----
Confidence 999999999999999999999754444555689999999999999999998754 4478888743321 0
Q ss_pred ccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCc
Q 014302 324 PDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGP 403 (427)
Q Consensus 324 ~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~ 403 (427)
.....+...|++++|+|||++||+ ++.| |.|+|||.. ++++. .+.+... ...+++|.|+ |.
T Consensus 502 --~~~~~h~~~v~~l~~s~dg~~l~s---~~~d---g~v~lwd~~-~~~~~-----~~~~h~~--~v~~~~fs~d---g~ 562 (577)
T 2ymu_A 502 --QTLTGHSSSVRGVAFSPDGQTIAS---ASDD---KTVKLWNRN-GQLLQ-----TLTGHSS--SVWGVAFSPD---GQ 562 (577)
T ss_dssp --EEEECCSSCEEEEEECTTSSCEEE---EETT---SEEEEECTT-SCEEE-----EEECCSS--CEEEEEECTT---SS
T ss_pred --EEEeCCCCCEEEEEEcCCCCEEEE---EECc---CEEEEEeCC-CCEEE-----EEcCCCC--CEEEEEEcCC---CC
Confidence 011224458999999999999998 5566 779999964 44331 2333332 3668999986 66
Q ss_pred eeEEEeeCceEEEEe
Q 014302 404 LLSVCWSSGFCCTYP 418 (427)
Q Consensus 404 ~l~v~~~~g~i~~~~ 418 (427)
.|+.+..||.|.+|+
T Consensus 563 ~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 563 TIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEeCCCEEEEeC
Confidence 778888999999986
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=7.3e-29 Score=230.87 Aligned_cols=240 Identities=16% Similarity=0.277 Sum_probs=174.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++||+|+.|++++||++............+|...|.+++|+|++..+++++.|+.|++|++...
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~----- 137 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE----- 137 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT-----
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC-----
Confidence 799999999999999999999999999987643345566789999999999999954444456699999999711
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-------------------eEEeccCCeEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-------------------PIRRGFGGLSI 241 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-------------------~~~~~~~~v~~ 241 (427)
....++..+..| ...|.+++|+|++++++++. .+..|...|.+
T Consensus 138 -----------------~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~ 199 (345)
T 3fm0_A 138 -----------------DEYECVSVLNSH-TQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWS 199 (345)
T ss_dssp -----------------SCEEEEEEECCC-CSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred -----------------CCeEEEEEecCc-CCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEE
Confidence 122344445555 78899999999999866432 13347789999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCccc----------------cc-cCCCCeeEEEECCCCCEEEEEEcCCceeee
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEP----------------WS-STSGFVTGATWDPEGRMILLAFAGSLTLGS 304 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~----------------~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~ 304 (427)
++|+|+|++|++++.|++|++||........ .. .|...|.+++|+|++..|++++.++ .+++
T Consensus 200 l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-~i~v 278 (345)
T 3fm0_A 200 LAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDD-AIRV 278 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTS-CEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCC-eEEE
Confidence 9999999999999999999999975432210 11 3788999999999999999876554 8888
Q ss_pred eeeCCCCCCccccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 305 IHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
|+........... ..+.......|...|++++|+|++. +||+ ++.| |+|++|++..++..
T Consensus 279 w~~~~~~~~~~~~---~~~~~~~~~~h~~~V~~v~~~p~~~~~laS---~s~D---g~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 279 FQEDPNSDPQQPT---FSLTAHLHQAHSQDVNCVAWNPKEPGLLAS---CSDD---GEVAFWKYQRPEGL 339 (345)
T ss_dssp EEECTTSCTTSCC---EEEEEEETTSSSSCEEEEEECSSSTTEEEE---EETT---SCEEEEEECC----
T ss_pred EEeCCCCCcceee---EEEEeeecccccCcEeEeEEeCCCceEEEE---cCCC---CcEEEEEecCCCCc
Confidence 8876532110000 0000000113456899999999985 8888 5666 67999999876643
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2.1e-28 Score=249.06 Aligned_cols=273 Identities=14% Similarity=0.202 Sum_probs=202.5
Q ss_pred CCCC--ceeeeEEcCCC-CEEEEEeCCCeEEEEEccCCCC---cceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEE
Q 014302 97 LPEV--DLQGVSWHQHK-HIVAFISGSTQVIVRDYEDSGK---DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIW 170 (427)
Q Consensus 97 l~~~--~V~~l~~sp~g-~~lat~~~d~~v~vwd~~~~~~---~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw 170 (427)
+.+| .|++++|+|++ ++|++|+.|++|+||++..... .......+|...|.+++|+|++..+++++.++.|+||
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 3455 89999999976 6999999999999999976521 1234456899999999999999544445567999999
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce--------------E----
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP--------------I---- 232 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~--------------~---- 232 (427)
|+. ++ .....+..| ...|.+++|+|+++++.++.. .
T Consensus 458 d~~---------~~----------------~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 458 DLA---------AG----------------VSTRRFVGH-TKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE 511 (694)
T ss_dssp ETT---------TT----------------EEEEEEECC-SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred ECC---------CC----------------cceeEEeCC-CCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc
Confidence 997 11 344456666 788999999999998664421 1
Q ss_pred --EeccCCeEEEEEccCC--CEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeee
Q 014302 233 --RRGFGGLSILKWSPTG--DYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 307 (427)
Q Consensus 233 --~~~~~~v~~~~~sp~g--~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~ 307 (427)
..|...|.+++|+|++ ..|++++.|+.|++||+++.+.. .+..|...|.+++|+|+|++|++++. ++.+++|++
T Consensus 512 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~-Dg~i~iwd~ 590 (694)
T 3dm0_A 512 GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK-DGVVLLWDL 590 (694)
T ss_dssp STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-TSBCEEEET
T ss_pred CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC-CCeEEEEEC
Confidence 1256679999999987 57899999999999999988764 44589999999999999999998754 458888888
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeee------
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFI------ 381 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~------ 381 (427)
..... ...+.....|.+++|+|++.+|+++ .+ +.|+|||++++.++........
T Consensus 591 ~~~~~-------------~~~~~~~~~v~~~~~sp~~~~l~~~---~~----~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 650 (694)
T 3dm0_A 591 AEGKK-------------LYSLEANSVIHALCFSPNRYWLCAA---TE----HGIKIWDLESKSIVEDLKVDLKAEAEKA 650 (694)
T ss_dssp TTTEE-------------EECCBCSSCEEEEEECSSSSEEEEE---ET----TEEEEEETTTTEEEEEECCCCC------
T ss_pred CCCce-------------EEEecCCCcEEEEEEcCCCcEEEEE---cC----CCEEEEECCCCCChhhhccccccccccc
Confidence 66421 1112234478999999999999874 22 3499999998876543211000
Q ss_pred --eCC----CCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 382 --RGP----GDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 382 --~~~----~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
.++ .......+++|.|+ |..|++|..||.|.+|++
T Consensus 651 ~~~~~~~~~~~~~~~~~l~~spd---g~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 651 DNSGPAATKRKVIYCTSLNWSAD---GSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp ----------CCCCEEEEEECTT---SSEEEEEETTSEEEEEEC
T ss_pred cccccccCCceeEEeeeEEEcCC---CCEEEEEcCCCeEEEEec
Confidence 000 01112356889886 889999999999999986
No 29
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=4.3e-28 Score=233.37 Aligned_cols=306 Identities=12% Similarity=0.164 Sum_probs=196.8
Q ss_pred CCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCC---------cceeeccCCc------------CCeeEEEEccCC--
Q 014302 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGK---------DACILTSDSQ------------RDVKVLEWRPNG-- 155 (427)
Q Consensus 99 ~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~---------~~~~~~~~~~------------~~v~~l~~sp~~-- 155 (427)
...|++++|+|+|++||+|+.||.|+||++..... .......+|. ..|++++|+|++
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 34899999999999999999999999999987621 0234455787 889999999997
Q ss_pred CceEEEecCCeEEEEeccCCCCcc---ccc--cCcccccccccCCCC---------cceeEeehhcccCCCceeeeEeCC
Q 014302 156 GRSLSVGCKGGICIWAPSYPGNAA---SVR--SGAASFLGALSRGPG---------TRWTLVDFLRSQNGEQITALSWGP 221 (427)
Q Consensus 156 ~~~la~g~~~~i~iw~~~~~~~~~---~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~v~~~~~sp 221 (427)
..+++++.++.|++|++....... ... .+.......+....- ........+...+...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 456777778999999986210000 000 000000000000000 000111122223378899999999
Q ss_pred CCCCcccCc--------------eE----------EeccCCeEEEEEccCC-CEEEEEecCCcEEEEEcCCCCc-----c
Q 014302 222 DGRFPGLGT--------------PI----------RRGFGGLSILKWSPTG-DYFFAAKFDGTFYLWETNTWTS-----E 271 (427)
Q Consensus 222 dg~~l~~~~--------------~~----------~~~~~~v~~~~~sp~g-~~l~~~~~dg~v~iwd~~~~~~-----~ 271 (427)
+|++++++. .+ ..|...|.+++|+|++ ++|++++.||.|++||+++.+. .
T Consensus 188 ~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 188 DYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp TSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 999865431 11 1466789999999999 8999999999999999998875 2
Q ss_pred ccccCCC------------CeeEEEECCCCCEEEEEEcCCceeeeeeeCC-CC--CCccccccccccccceeeccCC---
Q 014302 272 PWSSTSG------------FVTGATWDPEGRMILLAFAGSLTLGSIHFAS-KP--PSLDAHLLPVDLPDIVSLTGSQ--- 333 (427)
Q Consensus 272 ~~~~~~~------------~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~--- 333 (427)
.+..+.. .|.+++|+|+|++|++++. +.+++|++.. .. ..+.+|..... .........
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~i~ 343 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVHEYLRS--KLCSLYENDCIF 343 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESCGGGTT--THHHHHHTSGGG
T ss_pred EeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeeccccccc--cccccccccccc
Confidence 2334554 8999999999999997755 6899998875 32 23333322110 000000001
Q ss_pred ceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeee-------------ee------------eCCCCCC
Q 014302 334 GIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIG-------------FI------------RGPGDNP 388 (427)
Q Consensus 334 ~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~-------------~~------------~~~~~~~ 388 (427)
.+..++|+|++++|++ ++.| |.|++||+.++..+.+.... .. .......
T Consensus 344 ~~~~~~~s~~~~~l~s---~s~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMT---GSYN---NFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNK 417 (447)
T ss_dssp CCCCEEECTTSSEEEE---ECST---TEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTS
T ss_pred cceEEEECCCCCEEEE---eccC---CEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCC
Confidence 2445999999999988 6777 77999999998876433110 00 0001123
Q ss_pred CceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 389 KPVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 389 ~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
....++|+|+ +.+|+++.+++ +.+|.
T Consensus 418 ~i~~~~~~p~---~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 418 KILHTAWHPK---ENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp CCCEEEECSS---SSEEEEECSSC-EEEEE
T ss_pred ceeEEEECCC---CCEEEEEecce-eeeec
Confidence 4567999997 78899997665 55554
No 30
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=5.5e-29 Score=237.28 Aligned_cols=221 Identities=16% Similarity=0.305 Sum_probs=176.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++|+.|++|+|||+... .......+|...|.+++|+|++..+++++.|+.|++||+.
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~------- 222 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGF--ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ------- 222 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSS--CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT-------
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-------
Confidence 7999999999999999999999999999876 4556667899999999999999555556667999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccCCeEEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFGGLSILK 243 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~~v~~~~ 243 (427)
++ .++..+..| ...|.++.|+|+|++++++. .+..|...|.+++
T Consensus 223 --~~----------------~~~~~~~~h-~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~ 283 (410)
T 1vyh_C 223 --TG----------------YCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECIS 283 (410)
T ss_dssp --TC----------------CEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred --CC----------------cEEEEEeCC-CccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEE
Confidence 22 344555665 77899999999999865442 1345778899999
Q ss_pred EccC--------------------CCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCcee
Q 014302 244 WSPT--------------------GDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTL 302 (427)
Q Consensus 244 ~sp~--------------------g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i 302 (427)
|+|+ |.+|++|+.|+.|++||++++.+. .+.+|...|.+++|+|+|++|++++ .++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-~D~~i 362 (410)
T 1vyh_C 284 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA-DDKTL 362 (410)
T ss_dssp ECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE-TTTEE
T ss_pred EcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEe-CCCeE
Confidence 9996 678999999999999999988774 4458999999999999999999765 45588
Q ss_pred eeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 303 GSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
++|++...... .....+...|++++|+|++.+||+ ++.| ++|+||+++
T Consensus 363 ~vwd~~~~~~~------------~~~~~h~~~v~~l~~~~~~~~l~s---gs~D---~~i~vW~~r 410 (410)
T 1vyh_C 363 RVWDYKNKRCM------------KTLNAHEHFVTSLDFHKTAPYVVT---GSVD---QTVKVWECR 410 (410)
T ss_dssp EEECCTTSCCC------------EEEECCSSCEEEEEECSSSSCEEE---EETT---SEEEEEC--
T ss_pred EEEECCCCceE------------EEEcCCCCcEEEEEEcCCCCEEEE---EeCC---CcEEEEeCC
Confidence 88887654210 011124458999999999999998 6666 779999863
No 31
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.4e-28 Score=226.09 Aligned_cols=252 Identities=13% Similarity=0.122 Sum_probs=178.4
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.|++++|+|+|++||+|+.|++|+|||+..+.........+|...|.+++|+|+ +..+++++.|++|++|++.
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~----- 89 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE----- 89 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS-----
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC-----
Confidence 799999999999999999999999999987622234455689999999999863 6444445567999999987
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC--CCEEEEEec
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT--GDYFFAAKF 256 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~~ 256 (427)
.+ .+.... .+..|...|.+++|+|+ +.+|++++.
T Consensus 90 ----~~--------------~~~~~~--------------------------~~~~h~~~V~~v~~~p~~~g~~lasgs~ 125 (316)
T 3bg1_A 90 ----NG--------------TWEKSH--------------------------EHAGHDSSVNSVCWAPHDYGLILACGSS 125 (316)
T ss_dssp ----SS--------------CCCEEE--------------------------EECCCSSCCCEEEECCTTTCSCEEEECS
T ss_pred ----CC--------------cceEEE--------------------------EccCCCCceEEEEECCCCCCcEEEEEcC
Confidence 11 101111 12346678899999998 789999999
Q ss_pred CCcEEEEEcCCCCc----cccccCCCCeeEEEECCC-----------------CCEEEEEEcCCceeeeeeeCCCCCCcc
Q 014302 257 DGTFYLWETNTWTS----EPWSSTSGFVTGATWDPE-----------------GRMILLAFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 257 dg~v~iwd~~~~~~----~~~~~~~~~v~~v~~spd-----------------g~~l~~~~~~~~~i~~~~~~~~~~~~~ 315 (427)
|+.|++||++.... .....|...+.+++|+|+ +++|+++ +.++.+++|++..... +
T Consensus 126 D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-s~D~~v~lWd~~~~~~-~- 202 (316)
T 3bg1_A 126 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG-GCDNLIKLWKEEEDGQ-W- 202 (316)
T ss_dssp SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECC-BTTSBCCEEEECTTSC-E-
T ss_pred CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEe-cCCCeEEEEEeCCCCc-c-
Confidence 99999999987642 233478889999999998 3567765 5566888898854210 0
Q ss_pred ccccccccccceeeccCCceeEEEECCCC----CEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCce
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASG----ERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPV 391 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g----~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (427)
... .....|...|.+++|+|++ ++||+ ++.| ++|+||++.....-... ...+... .....
T Consensus 203 ---~~~----~~l~~h~~~V~~v~~sp~~~~~~~~las---~s~D---~~v~iw~~~~~~~~~~~-~~~~~~~--~~~v~ 266 (316)
T 3bg1_A 203 ---KEE----QKLEAHSDWVRDVAWAPSIGLPTSTIAS---CSQD---GRVFIWTCDDASSNTWS-PKLLHKF--NDVVW 266 (316)
T ss_dssp ---EEE----ECCBCCSSCEEEEECCCCSSCSCCEEEE---EETT---CEEEEEECSSTTCCCCB-CCEEEEC--SSCEE
T ss_pred ---cee----eecccCCCceEEEEecCCCCCCCceEEE---EcCC---CeEEEEEccCccccchh-hhhhhcC--CCcEE
Confidence 000 0011244589999999987 78988 5666 77999999762110000 0011111 22366
Q ss_pred eEEeccCCCCCceeEEEeeCceEEEEeccccC
Q 014302 392 AFSFHDKFKQGPLLSVCWSSGFCCTYPLIFRS 423 (427)
Q Consensus 392 ~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~~~ 423 (427)
+++|.|+ +.+|++|..||.|.+|+.-...
T Consensus 267 ~v~~sp~---g~~las~~~D~~v~lw~~~~~g 295 (316)
T 3bg1_A 267 HVSWSIT---ANILAVSGGDNKVTLWKESVDG 295 (316)
T ss_dssp EEEECTT---TCCEEEEESSSCEEEEEECTTS
T ss_pred EEEEcCC---CCEEEEEcCCCeEEEEEECCCC
Confidence 8999986 7789999999999999975443
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=3.9e-28 Score=227.69 Aligned_cols=275 Identities=12% Similarity=0.161 Sum_probs=197.7
Q ss_pred CCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 99 ~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
...|++++|+|++++||+++.|+.|+||++.............|...|.+++|+|++..+++++.++.|++|++.
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~----- 82 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK----- 82 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE-----
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC-----
Confidence 347999999999999999999999999999877222555556799999999999999545555566999999997
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce-----------------E----EeccC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP-----------------I----RRGFG 237 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~-----------------~----~~~~~ 237 (427)
.+ +......+..+ ...|.+++|+|++++++.+.. . ..|..
T Consensus 83 ----~~--------------~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~ 143 (372)
T 1k8k_C 83 ----GR--------------TWKPTLVILRI-NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS 143 (372)
T ss_dssp ----TT--------------EEEEEEECCCC-SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS
T ss_pred ----CC--------------eeeeeEEeecC-CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC
Confidence 11 22222223333 778999999999987553311 1 12567
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcC------------------CCCc-cccccCCCCeeEEEECCCCCEEEEEEcC
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETN------------------TWTS-EPWSSTSGFVTGATWDPEGRMILLAFAG 298 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~------------------~~~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~ 298 (427)
.+.+++|+|++++|++++.|+.|++||++ .++. ..+..|...+.+++|+|++++|++++ .
T Consensus 144 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 222 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS-H 222 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE-T
T ss_pred CeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe-C
Confidence 89999999999999999999999999965 2333 23337888999999999999999875 4
Q ss_pred CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc--CceEEEe
Q 014302 299 SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR--TPLISLS 376 (427)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~--~~~~~~~ 376 (427)
++.+++|++...... .....+...|.+++|+|++++|++ + .| +.|++|++.. +......
T Consensus 223 d~~i~i~d~~~~~~~------------~~~~~~~~~v~~~~~~~~~~~l~~---~-~d---~~i~i~~~~~~~~~~~~~~ 283 (372)
T 1k8k_C 223 DSTVCLADADKKMAV------------ATLASETLPLLAVTFITESSLVAA---G-HD---CFPVLFTYDSAAGKLSFGG 283 (372)
T ss_dssp TTEEEEEEGGGTTEE------------EEEECSSCCEEEEEEEETTEEEEE---E-TT---SSCEEEEEETTTTEEEECC
T ss_pred CCEEEEEECCCCcee------------EEEccCCCCeEEEEEecCCCEEEE---E-eC---CeEEEEEccCcCceEEEee
Confidence 558888888654210 011123348999999999998887 4 34 5599999987 4321110
Q ss_pred -----------------------ee----------eeeeCCCCCCCceeEEeccCCCCC---ceeEEEeeCceEEEEecc
Q 014302 377 -----------------------LI----------GFIRGPGDNPKPVAFSFHDKFKQG---PLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 377 -----------------------~~----------~~~~~~~~~~~~~~~~f~~~~~~g---~~l~v~~~~g~i~~~~~~ 420 (427)
.. ..+. .+......+++|++. +| .+|+.|..||.|.+|++-
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~--~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 284 RLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD-SLHKNSVSQISVLSG--GKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CCCCC--------CHHHHHHHCCCCC---------CCCS-SSSSSCEEEEEEEES--TTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccCccccchhhhcchhhhhhhcccccccccCcccccccc-ccccCCcceeEEecC--CCcceeeEEEecCCCceEEEEec
Confidence 00 1111 122234667887754 34 789999999999999974
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=7.3e-28 Score=223.96 Aligned_cols=236 Identities=13% Similarity=0.208 Sum_probs=169.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++.+|++++.|++|+|||+..+ .......+|...|.+++|+|++..+++++.++.|++|++.
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~------- 148 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTG--TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL------- 148 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSS--CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS-------
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCC--cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc-------
Confidence 7999999999999999999999999999877 4555567899999999999999656666677999999986
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCC----------CcccC----------------ceEEe
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR----------FPGLG----------------TPIRR 234 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~----------~l~~~----------------~~~~~ 234 (427)
+...........+ ...|.+++|+|++. +++++ ..+..
T Consensus 149 ----------------~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 211 (343)
T 2xzm_R 149 ----------------GECKFSSAEKENH-SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKA 211 (343)
T ss_dssp ----------------SCEEEECCTTTSC-SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEEC
T ss_pred ----------------CCceeeeecccCC-CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcC
Confidence 0011111112233 67789999999873 33322 12455
Q ss_pred ccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc-cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCC
Q 014302 235 GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPS 313 (427)
Q Consensus 235 ~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~ 313 (427)
|...|.+++|+|+|++|++++.|+.|++||++.... .....+...|.+++|+|++++++++ .++ .+++|++......
T Consensus 212 h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~-~v~iw~~~~~~~~ 289 (343)
T 2xzm_R 212 HESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQ-GVKIFNLMTQSKA 289 (343)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESS-CEEEEESSSCCSC
T ss_pred ccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCC-CEEEEEeCCCCCC
Confidence 888999999999999999999999999999955443 3333456679999999999988754 343 6888887654221
Q ss_pred ccccccccccccce-eeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 314 LDAHLLPVDLPDIV-SLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 314 ~~~~~~~~~~~~~~-~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
.............. ...+...|.+++|+|+|++||+ ++.| |+|++|+++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s---g~~D---g~v~~w~~~~g 341 (343)
T 2xzm_R 290 PVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA---GFTD---GVIRTFSFETS 341 (343)
T ss_dssp SEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE---EETT---SEEEEEEEEEE
T ss_pred ceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE---ecCC---ceEEEEEEEcc
Confidence 00000000000000 1123457999999999999999 6666 77999998754
No 34
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.7e-28 Score=224.52 Aligned_cols=227 Identities=15% Similarity=0.168 Sum_probs=169.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++|+.|++|+|||+..+ .......+|...|.+++|+|++..+++++.|+.|++|++.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~------- 137 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATG--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK------- 137 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-------
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCC--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-------
Confidence 7999999999999999999999999999887 5556667899999999999999555555566999999986
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCC------CcccC--------------c---eEEeccC
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR------FPGLG--------------T---PIRRGFG 237 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~------~l~~~--------------~---~~~~~~~ 237 (427)
+ .++..+..| ...|.++.|+|.+. .+.++ . .+..|..
T Consensus 138 ----------------~---~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~ 197 (319)
T 3frx_A 138 ----------------G---QCLATLLGH-NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS 197 (319)
T ss_dssp ----------------S---CEEEEECCC-SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS
T ss_pred ----------------C---CeEEEEecc-CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC
Confidence 1 123334444 67788888888543 22221 1 1345788
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Ccc
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLD 315 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~ 315 (427)
.|.+++|+|+|++|++++.||.|++||+++.+......+...+.+++|+|++.+|+++.. + .+.+|.+..... .+.
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~-~-~i~v~~~~~~~~~~~~~ 275 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA-T-GIKVFSLDPQYLVDDLR 275 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET-T-EEEEEEETTEEEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC-C-CcEEEEeCcCeeeeccC
Confidence 999999999999999999999999999998877555556678999999999999987654 3 466666654210 000
Q ss_pred ccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
.+.. .....+...+.+++|+|||++|++ ++.| ++|+|||+.+.
T Consensus 276 ~~~~------~~~~~~~~~v~~~~~spdg~~l~s---g~~D---g~i~vWd~~t~ 318 (319)
T 3frx_A 276 PEFA------GYSKAAEPHAVSLAWSADGQTLFA---GYTD---NVIRVWQVMTA 318 (319)
T ss_dssp CCCT------TCCGGGCCCEEEEEECTTSSEEEE---EETT---SCEEEEEEEEC
T ss_pred cccc------ccccCcCcceeEEEECCCCCEEEE---eecC---ceEEEEEEeec
Confidence 0000 001123347899999999999998 5666 66999999764
No 35
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=4.3e-28 Score=225.24 Aligned_cols=220 Identities=12% Similarity=0.146 Sum_probs=172.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCC--cceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGK--DACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.|.+++|+|++++||+|+.|+.|++|++..... .......+|...|.++.|++++ .+++++.++.|++||+.
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~----- 172 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIE----- 172 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETT-----
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECC-----
Confidence 699999999999999999999999999987522 2233456799999999999998 67777788999999997
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~~v~~ 241 (427)
++ .....+..| ...|.+++|+|++++++++. .+..|...|.+
T Consensus 173 ----~~----------------~~~~~~~~h-~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~ 231 (340)
T 1got_B 173 ----TG----------------QQTTTFTGH-TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA 231 (340)
T ss_dssp ----TT----------------EEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred ----CC----------------cEEEEEcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEE
Confidence 22 344455555 78899999999998865432 13457789999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCccccc---cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccc
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHL 318 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~ 318 (427)
++|+|++++|++++.|+.|++||+++.+..... .+...|.+++|+|+|++|++++. ++.+++|++......
T Consensus 232 v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-d~~i~vwd~~~~~~~----- 305 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD-DFNCNVWDALKADRA----- 305 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEE-----
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC-CCeEEEEEcccCcEe-----
Confidence 999999999999999999999999987653332 33457999999999999998754 458888887654210
Q ss_pred cccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEE
Q 014302 319 LPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYD 366 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd 366 (427)
.....+.+.|.+++|+|+|++||+ ++.| ++|+|||
T Consensus 306 -------~~~~~h~~~v~~~~~s~dg~~l~s---~s~D---~~i~iWd 340 (340)
T 1got_B 306 -------GVLAGHDNRVSCLGVTDDGMAVAT---GSWD---SFLKIWN 340 (340)
T ss_dssp -------EEEECCSSCEEEEEECTTSSCEEE---EETT---SCEEEEC
T ss_pred -------eEeecCCCcEEEEEEcCCCCEEEE---EcCC---ccEEecC
Confidence 011224458999999999999999 5666 6699996
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.1e-28 Score=232.21 Aligned_cols=230 Identities=13% Similarity=0.233 Sum_probs=166.0
Q ss_pred CCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 99 EVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 99 ~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
...|++++|+|++++||+++.|+.|+||++............+|...|.+++|+|++..+++++.++.|++|++..
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~---- 86 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP---- 86 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--------
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC----
Confidence 3479999999999999999999999999998752234445567999999999999995555555679999999971
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------------------eEEe-ccC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------------------PIRR-GFG 237 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------------~~~~-~~~ 237 (427)
+ ..+.....+..| ...|.+++|+|++++++.+. .+.. |..
T Consensus 87 -----~-------------~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~ 147 (377)
T 3dwl_C 87 -----D-------------GTWKQTLVLLRL-NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS 147 (377)
T ss_dssp --------------------CCCCEEECCCC-SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS
T ss_pred -----C-------------CceeeeeEeccc-CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC
Confidence 1 001223334444 78899999999998865331 1233 778
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCC------------------c-cccccCCCCeeEEEECCCCCEEEEEEcC
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWT------------------S-EPWSSTSGFVTGATWDPEGRMILLAFAG 298 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~------------------~-~~~~~~~~~v~~v~~spdg~~l~~~~~~ 298 (427)
.|.+++|+|++++|++++.|+.|++||++... . ..+ .|...|.+++|+|+|++|++++.
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~- 225 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH- 225 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET-
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC-
Confidence 89999999999999999999999999996432 1 122 78889999999999999998754
Q ss_pred CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 299 SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
++.+++|++........ . + .....+...|.+++|+|+|++|++ ++++ + +.+|+..
T Consensus 226 d~~i~iwd~~~~~~~~~--~--~----~~~~~~~~~v~~~~~s~~~~~l~~---~~~~---~-~~~~~~~ 280 (377)
T 3dwl_C 226 DSSVTIAYPSAPEQPPR--A--L----ITVKLSQLPLRSLLWANESAIVAA---GYNY---S-PILLQGN 280 (377)
T ss_dssp TTEEC-CEECSTTSCEE--E--C----CCEECSSSCEEEEEEEETTEEEEE---ESSS---S-EEEECCC
T ss_pred CCcEEEEECCCCCCcce--e--e----EeecCCCCceEEEEEcCCCCEEEE---EcCC---c-EEEEEeC
Confidence 45888888876532000 0 0 111123447999999999999988 4444 3 5577765
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.2e-28 Score=229.90 Aligned_cols=272 Identities=13% Similarity=0.185 Sum_probs=197.5
Q ss_pred ceeeeEEcCCCC-EEEEE----------eCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEE
Q 014302 101 DLQGVSWHQHKH-IVAFI----------SGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICI 169 (427)
Q Consensus 101 ~V~~l~~sp~g~-~lat~----------~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~i 169 (427)
.|.+++|+|+++ +||++ +.|+.|+||++.............|...|.+++|+|++..+++++.++.|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~v 93 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLEL 93 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEE
Confidence 688999999997 99999 8899999999987632223333468889999999999954444446699999
Q ss_pred EeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCC-CCCcccC--------------c----
Q 014302 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-GRFPGLG--------------T---- 230 (427)
Q Consensus 170 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd-g~~l~~~--------------~---- 230 (427)
|++..... .......+..| ...|.+++|+|+ +++++++ .
T Consensus 94 w~~~~~~~---------------------~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 151 (416)
T 2pm9_A 94 YSTNEANN---------------------AINSMARFSNH-SSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS 151 (416)
T ss_dssp ECCSSTTS---------------------CCCEEEECCCS-SSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT
T ss_pred eecccccc---------------------cccchhhccCC-ccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc
Confidence 99971000 01234445555 788999999998 6664322 1
Q ss_pred ---e-----EEeccCCeEEEEEccC-CCEEEEEecCCcEEEEEcCCCCccccc-cC------CCCeeEEEECCCCC-EEE
Q 014302 231 ---P-----IRRGFGGLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTSEPWS-ST------SGFVTGATWDPEGR-MIL 293 (427)
Q Consensus 231 ---~-----~~~~~~~v~~~~~sp~-g~~l~~~~~dg~v~iwd~~~~~~~~~~-~~------~~~v~~v~~spdg~-~l~ 293 (427)
. ...|...+.+++|+|+ +.+|++++.|+.|++||+++.+..... .+ ...+.+++|+|++. +++
T Consensus 152 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 152 NYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp TCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 1 1236678999999999 688999999999999999987763332 22 78899999999985 565
Q ss_pred EEEcCCc---eeeeeeeCCCCCCccccccccccccceee-ccCCceeEEEECC-CCCEEEEEEecCCCcceeEEEEEEec
Q 014302 294 LAFAGSL---TLGSIHFASKPPSLDAHLLPVDLPDIVSL-TGSQGIEKIAWDA-SGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 294 ~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~sp-~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
++ ..++ .+++|++....... .... .+...|.+++|+| ++++|++ ++.| ++|++||++
T Consensus 232 ~~-~~d~~~~~i~~~d~~~~~~~~-----------~~~~~~~~~~v~~~~~s~~~~~~l~s---~~~d---g~v~~wd~~ 293 (416)
T 2pm9_A 232 TA-TGSDNDPSILIWDLRNANTPL-----------QTLNQGHQKGILSLDWCHQDEHLLLS---SGRD---NTVLLWNPE 293 (416)
T ss_dssp EE-ECCSSSCCCCEEETTSTTSCS-----------BCCCSCCSSCEEEEEECSSCSSCEEE---EESS---SEEEEECSS
T ss_pred EE-ECCCCCceEEEEeCCCCCCCc-----------EEeecCccCceeEEEeCCCCCCeEEE---EeCC---CCEEEeeCC
Confidence 54 5555 88888887642110 0011 2345899999999 9999998 5555 679999999
Q ss_pred cCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEeccc
Q 014302 369 RTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
++..+.. +.+... ...+++|.|+ ...+|+++..||.|.+|++.-
T Consensus 294 ~~~~~~~-----~~~~~~--~v~~~~~s~~--~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 294 SAEQLSQ-----FPARGN--WCFKTKFAPE--APDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp SCCEEEE-----EECSSS--CCCCEEECTT--CTTEEEECCSSSEEEEEESCC
T ss_pred CCcccee-----ecCCCC--ceEEEEECCC--CCCEEEEEecCCcEEEEEccC
Confidence 8876532 223222 2558999996 227899999999999999753
No 38
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-27 Score=228.44 Aligned_cols=268 Identities=16% Similarity=0.260 Sum_probs=194.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++++.|+.|+||+... ........|...|.+++|+|++..+++++.++.+++|++..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~------ 180 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTG---ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS------ 180 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTS---CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT------
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCC---CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC------
Confidence 799999999999999999999999999332 35555667999999999999996566666679999999971
Q ss_pred cccCcccccccccCCCCcceeEeehhccc--------------CCCceeeeEeCCCCCCcccC----------------c
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQ--------------NGEQITALSWGPDGRFPGLG----------------T 230 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~v~~~~~spdg~~l~~~----------------~ 230 (427)
+ .....+..+ ....+.+++|+|++.++..+ .
T Consensus 181 ---~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~ 241 (425)
T 1r5m_A 181 ---G----------------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTG 241 (425)
T ss_dssp ---T----------------EEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSE
T ss_pred ---C----------------cEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceee
Confidence 1 111112211 01227788888876653211 1
Q ss_pred eEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccc-cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 231 PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 231 ~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
.+..|...+.+++|+|++++|++++.|+.|++||+++.+... +..|...+.+++|+|++ ++++++ .++.+++|++..
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-~d~~i~i~d~~~ 319 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCS-MDGSVRLWSLKQ 319 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEE-TTSEEEEEETTT
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEe-CCCcEEEEECCC
Confidence 234577899999999999999999999999999999877643 34788999999999999 776654 555888888765
Q ss_pred CCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE---------------E
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI---------------S 374 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~---------------~ 374 (427)
.... .....+...|.+++|+|++++|++ ++.| |.|++||+.++... .
T Consensus 320 ~~~~------------~~~~~~~~~i~~~~~s~~~~~l~~---~~~d---g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (425)
T 1r5m_A 320 NTLL------------ALSIVDGVPIFAGRISQDGQKYAV---AFMD---GQVNVYDLKKLNSKSRSLYGNRDGILNPLP 381 (425)
T ss_dssp TEEE------------EEEECTTCCEEEEEECTTSSEEEE---EETT---SCEEEEECHHHHC--------------CEE
T ss_pred CcEe------------EecccCCccEEEEEEcCCCCEEEE---EECC---CeEEEEECCCCccceeeeecccccccCccc
Confidence 4110 011123458999999999999999 4445 56999999876510 0
Q ss_pred EeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 375 LSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
..+...+.+........+++|.|+ +..|+++..+|.|.+|++
T Consensus 382 ~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 382 IPLYASYQSSQDNDYIFDLSWNCA---GNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp CCEEEEECCTTCCCCEEEEEECTT---SSEEEEEESSSCCEEEEC
T ss_pred chhhhhhcCcccCCceEEEEccCC---CceEEEEecCceEEEEee
Confidence 002223333322114778999986 678999999999999986
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.2e-27 Score=222.85 Aligned_cols=251 Identities=15% Similarity=0.178 Sum_probs=183.5
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.|++++|+|++++||+|+.|+.|+||++............+|...|++++|+|+ +..+++++.++.|++|++.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~----- 87 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE----- 87 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE-----
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC-----
Confidence 799999999999999999999999999985533455566789999999999977 7444444556999999997
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC--CCEEEEEec
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT--GDYFFAAKF 256 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~--g~~l~~~~~ 256 (427)
.+ .+.... .+..|...+.+++|+|+ +++|++++.
T Consensus 88 ----~~--------------~~~~~~--------------------------~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 123 (379)
T 3jrp_A 88 ----NG--------------RWSQIA--------------------------VHAVHSASVNSVQWAPHEYGPLLLVASS 123 (379)
T ss_dssp ----TT--------------EEEEEE--------------------------EECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ----CC--------------ceeEee--------------------------eecCCCcceEEEEeCCCCCCCEEEEecC
Confidence 11 111111 22335678999999999 999999999
Q ss_pred CCcEEEEEcCCCCcc---ccccCCCCeeEEEECC-------------CCCEEEEEEcCCceeeeeeeCCCCCCccccccc
Q 014302 257 DGTFYLWETNTWTSE---PWSSTSGFVTGATWDP-------------EGRMILLAFAGSLTLGSIHFASKPPSLDAHLLP 320 (427)
Q Consensus 257 dg~v~iwd~~~~~~~---~~~~~~~~v~~v~~sp-------------dg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 320 (427)
|+.|++||++..... ....|...|.+++|+| ++.++++++. ++.+++|++.........
T Consensus 124 d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~---- 198 (379)
T 3jrp_A 124 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVL---- 198 (379)
T ss_dssp TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET-TSCEEEEEEETTTTEEEE----
T ss_pred CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecCCCcceee----
Confidence 999999999887542 3337899999999999 6888887755 458888888754211000
Q ss_pred cccccceeeccCCceeEEEECCC---CCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEecc
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDAS---GERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHD 397 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~---g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 397 (427)
......+...|.+++|+|+ +++|++ ++.| |.|++||+..+...... .............+++|.|
T Consensus 199 ----~~~~~~h~~~v~~~~~sp~~~~~~~l~s---~~~d---g~i~iwd~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~ 266 (379)
T 3jrp_A 199 ----ESTLEGHSDWVRDVAWSPTVLLRSYLAS---VSQD---RTCIIWTQDNEQGPWKK--TLLKEEKFPDVLWRASWSL 266 (379)
T ss_dssp ----EEEECCCSSCEEEEEECCCCSSSEEEEE---EETT---SCEEEEEESSTTSCCEE--EESSSSCCSSCEEEEEECS
T ss_pred ----EEEEecccCcEeEEEECCCCCCCCeEEE---EeCC---CEEEEEeCCCCCcccee--eeeccccCCCcEEEEEEcC
Confidence 0011124458999999999 889988 4555 66999999886421110 0111112223466899998
Q ss_pred CCCCCceeEEEeeCceEEEEecc
Q 014302 398 KFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 398 ~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+ |..|+++..+|.|.+|++-
T Consensus 267 ~---g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 267 S---GNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp S---SCCEEEEESSSSEEEEEEE
T ss_pred C---CCEEEEecCCCcEEEEeCC
Confidence 6 7789999999999999975
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=2.9e-27 Score=223.95 Aligned_cols=289 Identities=15% Similarity=0.107 Sum_probs=197.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCC----CcceeeccCCcCCeeEEEEccC----C---CceEEEecCCeEEE
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSG----KDACILTSDSQRDVKVLEWRPN----G---GRSLSVGCKGGICI 169 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~----~~~~~~~~~~~~~v~~l~~sp~----~---~~~la~g~~~~i~i 169 (427)
.|++++|+| ++|++++.|++|+||++.... .........|...|.+++|+|+ + ..+++++.++.|++
T Consensus 18 ~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~i 95 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLF 95 (397)
T ss_dssp CEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEE
T ss_pred CeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEE
Confidence 899999999 899999999999999998873 1245555689999999999999 7 66666677899999
Q ss_pred EeccCCCCccccccCcccccccccCCCCcceeEeehhcccC----CCceeeeEeC----CCCCC-cccCc----------
Q 014302 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQN----GEQITALSWG----PDGRF-PGLGT---------- 230 (427)
Q Consensus 170 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~s----pdg~~-l~~~~---------- 230 (427)
|++..... ........+..+. ...|.+++|+ |++++ ++.+.
T Consensus 96 w~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 96 YRITREDE--------------------TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp EEEEECTT--------------------TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred EEccCCcc--------------------cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeC
Confidence 99971100 0000122233332 3789999999 88887 54321
Q ss_pred ------------------eEE-------eccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccc-ccc---C---CC
Q 014302 231 ------------------PIR-------RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WSS---T---SG 278 (427)
Q Consensus 231 ------------------~~~-------~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~-~~~---~---~~ 278 (427)
.+. .|...+.+++|+|++ +|++++.|+.|++||+++.+... +.. | ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN 234 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCC
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCC
Confidence 121 146678999999999 99999999999999999877643 335 7 89
Q ss_pred CeeEEEECCCCCEEEEEEcCC--ceeeeeeeCCCCC--CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecC
Q 014302 279 FVTGATWDPEGRMILLAFAGS--LTLGSIHFASKPP--SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGG 354 (427)
Q Consensus 279 ~v~~v~~spdg~~l~~~~~~~--~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~ 354 (427)
.+.+++|+|++++|++++.++ +.+++|++..... .+.+...+. ........+...|.+++|+|++++|++ ++
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~---~~ 310 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS-QASLGEFAHSSWVMSLSFNDSGETLCS---AG 310 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---------CCBSBSSCEEEEEECSSSSEEEE---EE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccc-cccccccccCCcEEEEEECCCCCEEEE---Ee
Confidence 999999999999999876551 5788888765421 111100000 000001114568999999999999998 45
Q ss_pred CCcceeEEEEEEeccCceEEEeeeeeee-CC--------C-----CCCCceeEEeccCCC-------CCceeEEEeeCce
Q 014302 355 DDIYKGLIAIYDARRTPLISLSLIGFIR-GP--------G-----DNPKPVAFSFHDKFK-------QGPLLSVCWSSGF 413 (427)
Q Consensus 355 ~d~~~g~i~vwd~~~~~~~~~~~~~~~~-~~--------~-----~~~~~~~~~f~~~~~-------~g~~l~v~~~~g~ 413 (427)
.| |.|++||++++..+......... +. . ......+++|.|+.. .+.+|++|..||.
T Consensus 311 ~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 311 WD---GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp TT---SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTE
T ss_pred CC---CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCc
Confidence 55 77999999988765333210000 11 0 033467899998721 1168999999999
Q ss_pred EEEEec
Q 014302 414 CCTYPL 419 (427)
Q Consensus 414 i~~~~~ 419 (427)
|.+|++
T Consensus 388 i~iw~~ 393 (397)
T 1sq9_A 388 IRWFRE 393 (397)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999986
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-27 Score=228.41 Aligned_cols=282 Identities=13% Similarity=0.138 Sum_probs=195.7
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCC--CCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCC
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDS--GKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPG 176 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~--~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~ 176 (427)
..|++++|+|++++|++++.|+.|+||++... ..........|...|++++|+|++..+|+++ .++.|++|++....
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 47999999999999999999999999999873 1235556677999999999999943666665 45999999997211
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCC-CCCcccCc--------------e---EEec---
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPD-GRFPGLGT--------------P---IRRG--- 235 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd-g~~l~~~~--------------~---~~~~--- 235 (427)
.... .........+..+ ...|.+++|+|+ +.+++++. . +..+
T Consensus 148 ~~~~----------------~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 148 ESPS----------------NYTPLTPGQSMSS-VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp SCTT----------------TCCCBCCCCSCCS-SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS
T ss_pred cccc----------------cccccccccccCC-CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc
Confidence 0000 0000011112333 678999999998 55544321 1 1122
Q ss_pred ---cCCeEEEEEccCC-CEEEEEecCC---cEEEEEcCCCC-c-cccc-cCCCCeeEEEECC-CCCEEEEEEcCCceeee
Q 014302 236 ---FGGLSILKWSPTG-DYFFAAKFDG---TFYLWETNTWT-S-EPWS-STSGFVTGATWDP-EGRMILLAFAGSLTLGS 304 (427)
Q Consensus 236 ---~~~v~~~~~sp~g-~~l~~~~~dg---~v~iwd~~~~~-~-~~~~-~~~~~v~~v~~sp-dg~~l~~~~~~~~~i~~ 304 (427)
...+.+++|+|++ .+|++++.|+ .|++||+++.. . ..+. .|...|.+++|+| ++++|++++. ++.+++
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~-dg~v~~ 289 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR-DNTVLL 289 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES-SSEEEE
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC-CCCEEE
Confidence 5779999999998 5788999998 99999999864 3 3444 6899999999999 8899887754 457888
Q ss_pred eeeCCCCCCccccccccccccceeeccCCceeEEEECCCC-CEEEEEEecCCCcceeEEEEEEeccCceEEEe-------
Q 014302 305 IHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASG-ERLAVSYKGGDDIYKGLIAIYDARRTPLISLS------- 376 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g-~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~------- 376 (427)
|++...... .....+.+.|.+++|+|++ ++|++ ++.| +.|++|++.........
T Consensus 290 wd~~~~~~~------------~~~~~~~~~v~~~~~s~~~~~~l~s---~~~d---~~i~iw~~~~~~~~~~~~~~~~~~ 351 (416)
T 2pm9_A 290 WNPESAEQL------------SQFPARGNWCFKTKFAPEAPDLFAC---ASFD---NKIEVQTLQNLTNTLDEQETETKQ 351 (416)
T ss_dssp ECSSSCCEE------------EEEECSSSCCCCEEECTTCTTEEEE---CCSS---SEEEEEESCCCCCSSCC-------
T ss_pred eeCCCCccc------------eeecCCCCceEEEEECCCCCCEEEE---EecC---CcEEEEEccCCCCCcccccccccc
Confidence 877654210 0111234588999999999 78888 7777 77999999875432110
Q ss_pred ---eeeee-----------------eCCCCCCCce-eEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 377 ---LIGFI-----------------RGPGDNPKPV-AFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 377 ---~~~~~-----------------~~~~~~~~~~-~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+..+. ..+.....++ +++|.|+ |.+|+++..||.|.+|++-
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d---g~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 352 QESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFG---GKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp ---------------CCSCCCSSCCCCCSTTCCCSCCCEEETT---TEEECBCTTSSCBCCBCCC
T ss_pred cCCcccccccccccccccccccccccCCccccCCccceEEeeC---CeEEEEeCCCCeEEEEEec
Confidence 00000 0011122233 7888886 8899999999999999864
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=2.5e-26 Score=212.56 Aligned_cols=265 Identities=15% Similarity=0.171 Sum_probs=181.8
Q ss_pred CCCCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCC--cceeeccCCcCCeeEEEEcc--CCCceEEEecCCeEE
Q 014302 95 HLLPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGK--DACILTSDSQRDVKVLEWRP--NGGRSLSVGCKGGIC 168 (427)
Q Consensus 95 ~~l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~v~~l~~sp--~~~~~la~g~~~~i~ 168 (427)
.++.+| .|++++|+|++++||+++.|+.|+||++..... .......+|...|++++|+| ++..+++++.++.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 344555 899999999999999999999999999987522 23344457999999999999 574444445569999
Q ss_pred EEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC-
Q 014302 169 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT- 247 (427)
Q Consensus 169 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~- 247 (427)
+|++....... ....+.... .+..|...+.+++|+|+
T Consensus 85 vwd~~~~~~~~----------------~~~~~~~~~--------------------------~~~~~~~~v~~~~~~~~~ 122 (351)
T 3f3f_A 85 LWEEDPDQEEC----------------SGRRWNKLC--------------------------TLNDSKGSLYSVKFAPAH 122 (351)
T ss_dssp EEEECTTSCTT----------------SSCSEEEEE--------------------------EECCCSSCEEEEEECCGG
T ss_pred EEecCCCcccc----------------cccCcceee--------------------------eecccCCceeEEEEcCCC
Confidence 99997110000 000001111 23346778999999999
Q ss_pred -CCEEEEEecCCcEEEEEcCCCCcccc--------------ccCCCCeeEEEECCC---CCEEEEEEcCCceeeeeeeCC
Q 014302 248 -GDYFFAAKFDGTFYLWETNTWTSEPW--------------SSTSGFVTGATWDPE---GRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 248 -g~~l~~~~~dg~v~iwd~~~~~~~~~--------------~~~~~~v~~v~~spd---g~~l~~~~~~~~~i~~~~~~~ 309 (427)
+++|++++.|+.|++||+++.+.... ..+...+.+++|+|+ +..+++++.++ .+..+....
T Consensus 123 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~ 201 (351)
T 3f3f_A 123 LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-AIIYQRGKD 201 (351)
T ss_dssp GCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-EEEEEECTT
T ss_pred CCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC-cEEEEccCC
Confidence 99999999999999999988775221 157788999999997 88888776555 443333322
Q ss_pred CCCCccccccccccccceeeccCCceeEEEECCCC----CEEEEEEecCCCcceeEEEEEEeccCceE------------
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASG----ERLAVSYKGGDDIYKGLIAIYDARRTPLI------------ 373 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g----~~La~~~~~~~d~~~g~i~vwd~~~~~~~------------ 373 (427)
..... . .....+...|.+++|+|++ ++|++ ++.| |.|++||++.+...
T Consensus 202 ~~~~~------~----~~~~~h~~~i~~~~~~p~~~~~~~~l~s---~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~ 265 (351)
T 3f3f_A 202 GKLHV------A----AKLPGHKSLIRSISWAPSIGRWYQLIAT---GCKD---GRIRIFKITEKLSPLASEESLTNSNM 265 (351)
T ss_dssp SCEEE------E----EECCCCCSCEEEEEECCCSSCSSEEEEE---EETT---SCEEEEEEEECC--------------
T ss_pred Cceee------e----eecCCCCcceeEEEECCCCCCcceEEEE---EcCC---CeEEEEeCCCCcCccccCCcccceec
Confidence 21000 0 1111244589999999998 78888 5556 66999999874211
Q ss_pred -----------------------------EEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEeccccC
Q 014302 374 -----------------------------SLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIFRS 423 (427)
Q Consensus 374 -----------------------------~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~~~ 423 (427)
...+...+.+. .....+++|.|+ +.+|++|..||.|.+|++-...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~s~~---~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 266 FDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH--NGEVWSVSWNLT---GTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp -------------------------CCSEEEEEEEEECTT--SSCEEEEEECSS---SCCEEEEETTSCEEEEEECTTS
T ss_pred cCCCcccccccccccccccceeeeecccccccEEEEEecc--cccEEEEEEcCC---CCEEEEecCCCcEEEEecCcCc
Confidence 11122222222 233678999986 6789999999999999986543
No 43
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=2.4e-27 Score=221.61 Aligned_cols=223 Identities=15% Similarity=0.158 Sum_probs=160.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCc--ceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKD--ACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.|++++|+|++.+| +++.|++|+|||+..+... ......+|...|++++|+|++..+++++.++.|++||+.
T Consensus 96 ~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~----- 169 (357)
T 4g56_B 96 GVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS----- 169 (357)
T ss_dssp CEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT-----
T ss_pred CEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC-----
Confidence 69999999998655 5678999999999876221 122345799999999999999544445566999999997
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCC-cccC--------------ceE-----EeccCC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRF-PGLG--------------TPI-----RRGFGG 238 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~--------------~~~-----~~~~~~ 238 (427)
+ ...+..+..| ...|++++|+|++.. +.++ ... ..+...
T Consensus 170 ----~----------------~~~~~~~~~h-~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 228 (357)
T 4g56_B 170 ----Q----------------KAVLKSYNAH-SSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI 228 (357)
T ss_dssp ----T----------------TEEEEEECCC-SSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred ----C----------------CcEEEEEcCC-CCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccccc
Confidence 1 2445556666 788999999998863 2211 111 124467
Q ss_pred eEEEEEccCC-CEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCC-EEEEEEcCCceeeeeeeCCCCCCcc
Q 014302 239 LSILKWSPTG-DYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGR-MILLAFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 239 v~~~~~sp~g-~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~-~l~~~~~~~~~i~~~~~~~~~~~~~ 315 (427)
+.+++|+|++ .+|++|+.|+.|++||+++++.. .+..|...|.+++|+|++. +|+++ +.++.+++|++.....
T Consensus 229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasg-s~D~~i~iwd~~~~~~--- 304 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASI-SEDCTVAVLDADFSEV--- 304 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEE-ETTSCEEEECTTSCEE---
T ss_pred ccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEE-eCCCEEEEEECCCCcE---
Confidence 8999999985 57779999999999999988774 4448899999999999985 55554 5666888887655311
Q ss_pred ccccccccccceeeccCCceeEEEECC-CCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDA-SGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp-~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
...+.|.+.|++|+|+| ++++||+ ++.| |+|++|++.+.
T Consensus 305 ----------~~~~~H~~~V~~vafsP~d~~~l~s---~s~D---g~v~iW~~~~~ 344 (357)
T 4g56_B 305 ----------FRDLSHRDFVTGVAWSPLDHSKFTT---VGWD---HKVLHHHLPSE 344 (357)
T ss_dssp ----------EEECCCSSCEEEEEECSSSTTEEEE---EETT---SCEEEEECC--
T ss_pred ----------eEECCCCCCEEEEEEeCCCCCEEEE---EcCC---CeEEEEECCCC
Confidence 12234566899999998 7999998 5566 66999999653
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=6.8e-26 Score=216.62 Aligned_cols=267 Identities=13% Similarity=0.259 Sum_probs=196.0
Q ss_pred CCCCCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccC
Q 014302 96 LLPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSY 174 (427)
Q Consensus 96 ~l~~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~ 174 (427)
+..+.-++.|+||++ ++||+|. |++|+|||..++.........+|...|++|+|+|+| .+|++| .++.|+||++.
T Consensus 102 ~~~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~- 177 (420)
T 4gga_A 102 IRNDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQ- 177 (420)
T ss_dssp CCCCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETT-
T ss_pred CcccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcC-
Confidence 333446789999986 5888875 999999999987333333445688899999999999 555555 56999999997
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC------------------ceEEecc
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG------------------TPIRRGF 236 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~------------------~~~~~~~ 236 (427)
++ ..+..+..| ...+.+++|++ .++.++ ..+..|.
T Consensus 178 --------~~----------------~~~~~~~~h-~~~v~~~s~~~--~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~ 230 (420)
T 4gga_A 178 --------QQ----------------KRLRNMTSH-SARVGSLSWNS--YILSSGSRSGHIHHHDVRVAEHHVATLSGHS 230 (420)
T ss_dssp --------TT----------------EEEEEECCC-SSCEEEEEEET--TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred --------CC----------------cEEEEEeCC-CCceEEEeeCC--CEEEEEeCCCceeEeeecccceeeEEecccc
Confidence 11 344555555 66777777743 333322 1245688
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-----ccccCCCCeeEEEECCCCCEEE-EE-EcCCceeeeeeeCC
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSGFVTGATWDPEGRMIL-LA-FAGSLTLGSIHFAS 309 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-----~~~~~~~~v~~v~~spdg~~l~-~~-~~~~~~i~~~~~~~ 309 (427)
..+..+.|+|+++++++++.|+.|++||..+++.. ....|...|.+++|+|++..++ ++ ++.++.|++|++..
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred cceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence 89999999999999999999999999999887642 2237889999999999776544 33 34567888888766
Q ss_pred CCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCC
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPK 389 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 389 (427)
... ...+..+..+.++.|+|+++.|+++. +..| +.|+|||+.++.++. .+.+... .
T Consensus 311 ~~~-------------~~~~~~~~~v~~~~~~~~~~~lv~~s-g~~d---~~I~iwd~~~~~~v~-----~l~gH~~--~ 366 (420)
T 4gga_A 311 GAC-------------LSAVDAHSQVCSILWSPHYKELISGH-GFAQ---NQLVIWKYPTMAKVA-----ELKGHTS--R 366 (420)
T ss_dssp TEE-------------EEEEECSSCEEEEEEETTTTEEEEEE-CTTT---CCEEEEETTTCCEEE-----EECCCSS--C
T ss_pred ccc-------------ceeeccccceeeeeecCCCCeEEEEE-ecCC---CEEEEEECCCCcEEE-----EEcCCCC--C
Confidence 411 11233445789999999999998843 4455 669999999887653 2334332 3
Q ss_pred ceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 390 PVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 390 ~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
..+++|.|+ |..|+.|..||.|.+|+++
T Consensus 367 V~~l~~spd---g~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 367 VLSLTMSPD---GATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEEECTT---SSCEEEEETTTEEEEECCS
T ss_pred EEEEEEcCC---CCEEEEEecCCeEEEEECC
Confidence 679999986 7789999999999999975
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.7e-26 Score=219.49 Aligned_cols=264 Identities=14% Similarity=0.208 Sum_probs=193.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.+.+++|++ ..+++++.|+.|+||++..+.. .......|...|.+++|+|++..+++++.++.|++|++.
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~-~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~------- 164 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSV-SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE------- 164 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTTCCE-EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT-------
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCCCcE-eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc-------
Confidence 566788876 4577788999999999987722 223334488899999999999444444456999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC------------------ceEEeccCCeEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG------------------TPIRRGFGGLSIL 242 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~------------------~~~~~~~~~v~~~ 242 (427)
.+ ..+..+..| ...|.+++|+ ++.+..+ ..+..|.+.|.++
T Consensus 165 --~~----------------~~~~~~~~~-~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 223 (401)
T 4aez_A 165 --SQ----------------TKLRTMAGH-QARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGL 223 (401)
T ss_dssp --TC----------------CEEEEECCC-SSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE
T ss_pred --CC----------------eEEEEecCC-CCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEE
Confidence 11 233444444 7788888884 3343221 1245588899999
Q ss_pred EEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEc--CCceeeeeeeCCCCCCcccccc
Q 014302 243 KWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFA--GSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 243 ~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~--~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
+|+|++++|++++.|+.|++||+++.+.. .+..|...|.+++|+|++..++++++ .++.+++|++.....
T Consensus 224 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~------- 296 (401)
T 4aez_A 224 AWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR------- 296 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE-------
T ss_pred EEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE-------
Confidence 99999999999999999999999987764 34478999999999998876665544 567888888776421
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCC
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKF 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 399 (427)
...+.+...|.+++|+|++++|+++. |..| |.|++||+.++...... .+.+.. ....+++|+|+
T Consensus 297 ------~~~~~~~~~v~~~~~s~~~~~l~~~~-g~~d---g~i~v~~~~~~~~~~~~---~~~~h~--~~v~~~~~s~d- 360 (401)
T 4aez_A 297 ------VNTVDAGSQVTSLIWSPHSKEIMSTH-GFPD---NNLSIWSYSSSGLTKQV---DIPAHD--TRVLYSALSPD- 360 (401)
T ss_dssp ------EEEEECSSCEEEEEECSSSSEEEEEE-CTTT---CEEEEEEEETTEEEEEE---EEECCS--SCCCEEEECTT-
T ss_pred ------EEEEeCCCcEEEEEECCCCCeEEEEe-ecCC---CcEEEEecCCccceeEE---EecCCC--CCEEEEEECCC-
Confidence 11223455899999999999998852 3345 77999999886654332 122322 23668999986
Q ss_pred CCCceeEEEeeCceEEEEecc
Q 014302 400 KQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 400 ~~g~~l~v~~~~g~i~~~~~~ 420 (427)
|..|+++..||.|.+|++.
T Consensus 361 --g~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 361 --GRILSTAASDENLKFWRVY 379 (401)
T ss_dssp --SSEEEEECTTSEEEEEECC
T ss_pred --CCEEEEEeCCCcEEEEECC
Confidence 7789999999999999975
No 46
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=6.4e-27 Score=217.99 Aligned_cols=275 Identities=9% Similarity=0.075 Sum_probs=190.0
Q ss_pred ceeeeEEcCCCC-EEEEEeC---CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC---CCceEEEecCCeEEEEecc
Q 014302 101 DLQGVSWHQHKH-IVAFISG---STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN---GGRSLSVGCKGGICIWAPS 173 (427)
Q Consensus 101 ~V~~l~~sp~g~-~lat~~~---d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~---~~~~la~g~~~~i~iw~~~ 173 (427)
.|++++|+|++. ++++++. |+.|+||++..... ......+|...|.+++|+|+ +..+++++.++.|++|++.
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 98 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL-KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLE 98 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE-EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTT
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc-cceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCC
Confidence 799999999997 4556665 99999999987622 22333468899999999999 5444555567999999997
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeee------EeCCCCCCcccCc---------------e-
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITAL------SWGPDGRFPGLGT---------------P- 231 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~------~~spdg~~l~~~~---------------~- 231 (427)
... .....+..| ...|.++ +|+|++++++++. .
T Consensus 99 ~~~------------------------~~~~~~~~~-~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~ 153 (357)
T 3i2n_A 99 APE------------------------MPVYSVKGH-KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPV 153 (357)
T ss_dssp SCS------------------------SCSEEECCC-SSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCS
T ss_pred CCC------------------------ccEEEEEec-ccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcc
Confidence 111 022334444 6778887 4577887754331 1
Q ss_pred --EEecc----CCeEEEE----EccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECC---CCCEEEEEEcC
Q 014302 232 --IRRGF----GGLSILK----WSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDP---EGRMILLAFAG 298 (427)
Q Consensus 232 --~~~~~----~~v~~~~----~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~sp---dg~~l~~~~~~ 298 (427)
+..+. ..+.+++ |+|++++|++++.|+.|++||+++.+......+...+.+++|+| ++.+|++++ .
T Consensus 154 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~ 232 (357)
T 3i2n_A 154 ANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATS-L 232 (357)
T ss_dssp EEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE-S
T ss_pred eeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC-C
Confidence 11122 2788888 78999999999999999999999988766668899999999999 999998875 4
Q ss_pred CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEEEeccCceEE---
Q 014302 299 SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIYDARRTPLIS--- 374 (427)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vwd~~~~~~~~--- 374 (427)
++.+++|++........ +.......+...|.+++|+|+++ +|++ ++.| |.|++||++......
T Consensus 233 dg~i~i~d~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~---~~~d---g~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 233 EGKFHVFDMRTQHPTKG-------FASVSEKAHKSTVWQVRHLPQNRELFLT---AGGA---GGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp TTEEEEEEEEEEETTTE-------EEEEEEECCSSCEEEEEEETTEEEEEEE---EETT---SEEEEEEEECCSCC--CC
T ss_pred CCeEEEEeCcCCCcccc-------eeeeccCCCcCCEEEEEECCCCCcEEEE---EeCC---CcEEEeecCCCccccccc
Confidence 55888888766421100 00001113455899999999999 6777 5556 779999998654321
Q ss_pred -----------EeeeeeeeCCCCCCCceeEEeccCCCCCceeE-EEeeCceEEEEecc
Q 014302 375 -----------LSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLS-VCWSSGFCCTYPLI 420 (427)
Q Consensus 375 -----------~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~-v~~~~g~i~~~~~~ 420 (427)
......+.+. .....+++|.|+ +..|+ .|..||.|.+|++-
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~---~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLS--TQPISSLDWSPD---KRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECC--SSCEEEEEECSS---STTEEEEEETTSEEEEEEEC
T ss_pred CCCCccccccccceeeccccC--CCCeeEEEEcCC---CCeEEEEecCCCcEEEEECC
Confidence 1122223332 223668999986 66677 58889999999974
No 47
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.5e-27 Score=222.11 Aligned_cols=276 Identities=12% Similarity=0.088 Sum_probs=186.1
Q ss_pred CceeeeEEcCCCCEEEEEeCCC-------eEEEEEccCCCCcc--------eeeccCCcCCeeEEEEccCCCceEEEe--
Q 014302 100 VDLQGVSWHQHKHIVAFISGST-------QVIVRDYEDSGKDA--------CILTSDSQRDVKVLEWRPNGGRSLSVG-- 162 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~-------~v~vwd~~~~~~~~--------~~~~~~~~~~v~~l~~sp~~~~~la~g-- 162 (427)
.+|++++|+|||++||+|+.+. .|+||+++...... ......|...|++++|+++ ++++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~---~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKG---IILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETT---EEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCC---EEEEEEC
Confidence 3799999999999999997643 59999998763211 1123467778888877643 33333
Q ss_pred ----------cCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcc-cCCCceeeeEeCCCCCCcc--cC
Q 014302 163 ----------CKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRS-QNGEQITALSWGPDGRFPG--LG 229 (427)
Q Consensus 163 ----------~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~spdg~~l~--~~ 229 (427)
.++.+++|++........ .....+.... .....+.+++|+|||++++ ++
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~ 153 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLE------------------FLTSVDFDASTNADDYTKLVYISREGTVAAIASS 153 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEE------------------EEEEECSSCCCCTTCCEEEEEECTTSSCEEEEES
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEE------------------EeeeeceeecCCcccCEEEEEEcCCCCEEEEEEC
Confidence 246688998862111000 0011111111 1134577899999999864 22
Q ss_pred c---eE-------------EeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc---ccccCCCCeeEEEECCCCC
Q 014302 230 T---PI-------------RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE---PWSSTSGFVTGATWDPEGR 290 (427)
Q Consensus 230 ~---~~-------------~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~---~~~~~~~~v~~v~~spdg~ 290 (427)
. .+ ..|...|.+++|+|||++|++++ ++.+++|+..+++.. ....|...+.+++|+|+|+
T Consensus 154 ~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~ 232 (365)
T 4h5i_A 154 KVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT 232 (365)
T ss_dssp CSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE
T ss_pred CCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC
Confidence 1 11 13667899999999999999988 556777777766653 2336888899999999999
Q ss_pred EEEEEEcCCc---eeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEe
Q 014302 291 MILLAFAGSL---TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDA 367 (427)
Q Consensus 291 ~l~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~ 367 (427)
++++++.+++ .++.|++....... ........+...|++++|||||++||+ ++.| ++|+|||+
T Consensus 233 ~l~~~s~d~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~V~~~~~Spdg~~las---gs~D---~~V~iwd~ 298 (365)
T 4h5i_A 233 VLIAASLKKGKGIVLTKISIKSGNTSV--------LRSKQVTNRFKGITSMDVDMKGELAVL---ASND---NSIALVKL 298 (365)
T ss_dssp EEEEEEESSSCCEEEEEEEEETTEEEE--------EEEEEEESSCSCEEEEEECTTSCEEEE---EETT---SCEEEEET
T ss_pred EEEEEecCCcceeEEeecccccceecc--------eeeeeecCCCCCeEeEEECCCCCceEE---EcCC---CEEEEEEC
Confidence 9998876653 45666665431100 000111223458999999999999999 6666 66999999
Q ss_pred ccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 368 RRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
++++++... .++... ...+++|.|+ |.+|+.|..|+.|.+|++.
T Consensus 299 ~~~~~~~~~----~~gH~~--~V~~v~fSpd---g~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 299 KDLSMSKIF----KQAHSF--AITEVTISPD---STYVASVSAANTIHIIKLP 342 (365)
T ss_dssp TTTEEEEEE----TTSSSS--CEEEEEECTT---SCEEEEEETTSEEEEEECC
T ss_pred CCCcEEEEe----cCcccC--CEEEEEECCC---CCEEEEEeCCCeEEEEEcC
Confidence 998765321 122222 3679999996 8899999999999999984
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=1.7e-27 Score=227.37 Aligned_cols=265 Identities=13% Similarity=0.091 Sum_probs=188.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.+++++|+|++++|++++.|+.|++||+... ........| ..+....|+|++..+++++.++.|++|++.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~--~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~------- 127 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIR--DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSN------- 127 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSE--ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTT-------
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccc--ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCC-------
Confidence 4678999999999999999999999998876 222222334 445556789999444444456999999987
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccCCeEEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFGGLSILK 243 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~~v~~~~ 243 (427)
.+ .....+..| ...|++++|+|++++++++. .+..|...|.+++
T Consensus 128 --~~----------------~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 128 --FN----------------LQREIDQAH-VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIA 188 (420)
T ss_dssp --SC----------------EEEEETTSS-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEE
T ss_pred --Cc----------------ceeeecccc-cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEE
Confidence 11 344445555 88999999999998865332 2456889999999
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCccccc----c---------------------CCCCeeEEEECCCCCEEEEEEcC
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSEPWS----S---------------------TSGFVTGATWDPEGRMILLAFAG 298 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~----~---------------------~~~~v~~v~~spdg~~l~~~~~~ 298 (427)
|+|++++|++++.|+.|++||+++++..... . +...+.+++|+|+|++|++++.
T Consensus 189 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~- 267 (420)
T 3vl1_A 189 IIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV- 267 (420)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET-
T ss_pred EcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC-
Confidence 9999999999999999999999987653222 1 2355666777899999987755
Q ss_pred CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEEEeccCceEEEee
Q 014302 299 SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIYDARRTPLISLSL 377 (427)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~ 377 (427)
++.+.+|++....... .....+...|.+++|+|+++ +|++ ++.| |.|++||++++...
T Consensus 268 dg~i~i~d~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~~~l~~---g~~d---g~i~vwd~~~~~~~---- 326 (420)
T 3vl1_A 268 SGVITVHNVFSKEQTI-----------QLPSKFTCSCNSLTVDGNNANYIYA---GYEN---GMLAQWDLRSPECP---- 326 (420)
T ss_dssp TSCEEEEETTTCCEEE-----------EECCTTSSCEEEEEECSSCTTEEEE---EETT---SEEEEEETTCTTSC----
T ss_pred CCeEEEEECCCCceeE-----------EcccccCCCceeEEEeCCCCCEEEE---EeCC---CeEEEEEcCCCcCc----
Confidence 4488888876642110 00112345899999999999 8888 5666 77999999886531
Q ss_pred eeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEeccc
Q 014302 378 IGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 378 ~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
...+.+... .++...+.+. +.+|+++..||.|.+|++--
T Consensus 327 ~~~~~~~~~--~~v~~~~~~~---~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 327 VGEFLINEG--TPINNVYFAA---GALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp SEEEEESTT--SCEEEEEEET---TEEEEEETTTEEEEEEEECC
T ss_pred hhhhhccCC--CCceEEEeCC---CCEEEEecCCccEEEEeccC
Confidence 111222111 1333334443 66899999999999999653
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=1e-26 Score=214.63 Aligned_cols=264 Identities=15% Similarity=0.138 Sum_probs=196.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|.+++|+|||++++++..++.+.+|..... ........|...|++++|+|++ .+|++++++.+++|++......
T Consensus 11 ~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~dg~i~iw~~~~~~~~-- 85 (337)
T 1gxr_A 11 PAYSFHVTADGQMQPVPFPPDALIGPGIPRH--ARQINTLNHGEVVCAVTISNPT-RHVYTGGKGCVKVWDISHPGNK-- 85 (337)
T ss_dssp ECCEEEECSSSCEEECCCCTTSSSSTTCCSE--EEEEEEECCSSCCCEEEECSSS-SEEEEECBSEEEEEETTSTTCC--
T ss_pred ceeEEEECCCCCEEEeecCCCcEeccccCCc--cccceeccCCCceEEEEEecCC-cEEEEcCCCeEEEEECCCCCce--
Confidence 6899999999999998887777666543332 2333345799999999999999 6777777999999999721110
Q ss_pred cccCcccccccccCCCCcceeEeehhc-ccCCCceeeeEeCCCCCCcccCc-------------------eEEeccCCeE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLR-SQNGEQITALSWGPDGRFPGLGT-------------------PIRRGFGGLS 240 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~l~~~~-------------------~~~~~~~~v~ 240 (427)
.....+. ..+...|.+++|+|+++++..+. .+..|...+.
T Consensus 86 --------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~ 145 (337)
T 1gxr_A 86 --------------------SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY 145 (337)
T ss_dssp --------------------SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE
T ss_pred --------------------eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE
Confidence 0111111 12377899999999998754321 1234667899
Q ss_pred EEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccc
Q 014302 241 ILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
+++|+|++++|++++.|+.|++||+++.+.. .+..|...+.+++|+|++++|++++. ++.+++|++.....
T Consensus 146 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~------- 217 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL-DNTVRSWDLREGRQ------- 217 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-TSEEEEEETTTTEE-------
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec-CCcEEEEECCCCce-------
Confidence 9999999999999999999999999987764 34478899999999999999998754 45888888765421
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCC
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKF 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 399 (427)
.....+...+.+++|+|++++|+++ +.+ +.|++||+.......+. . ......+++|.|+
T Consensus 218 ------~~~~~~~~~v~~~~~s~~~~~l~~~---~~~---~~i~~~~~~~~~~~~~~------~--~~~~v~~~~~~~~- 276 (337)
T 1gxr_A 218 ------LQQHDFTSQIFSLGYCPTGEWLAVG---MES---SNVEVLHVNKPDKYQLH------L--HESCVLSLKFAYC- 276 (337)
T ss_dssp ------EEEEECSSCEEEEEECTTSSEEEEE---ETT---SCEEEEETTSSCEEEEC------C--CSSCEEEEEECTT-
T ss_pred ------EeeecCCCceEEEEECCCCCEEEEE---cCC---CcEEEEECCCCCeEEEc------C--CccceeEEEECCC-
Confidence 1112344589999999999999984 444 56999999987754221 2 2223668999885
Q ss_pred CCCceeEEEeeCceEEEEecc
Q 014302 400 KQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 400 ~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+..|+++..+|.|.+|++.
T Consensus 277 --~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 277 --GKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp --SSEEEEEETTSEEEEEETT
T ss_pred --CCEEEEecCCCcEEEEECC
Confidence 7789999999999999964
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=2.8e-26 Score=218.88 Aligned_cols=273 Identities=15% Similarity=0.151 Sum_probs=189.9
Q ss_pred CCCcee-eeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCC
Q 014302 98 PEVDLQ-GVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 176 (427)
Q Consensus 98 ~~~~V~-~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~ 176 (427)
..+.+. ...|+|++++||+++.|+.|+|||+... ........|...|++++|+|++..+++++.++.|++|++.
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~--- 169 (420)
T 3vl1_A 95 KRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK--- 169 (420)
T ss_dssp CSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSC--EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT---
T ss_pred ecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCc--ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC---
Confidence 344444 4478999999999999999999998866 4555556899999999999999544445566999999997
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------------eE---Ee---cc
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------------PI---RR---GF 236 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------~~---~~---~~ 236 (427)
.+ .....+..| ...|.+++|+|++++++++. .+ .. +.
T Consensus 170 ------~~----------------~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~ 226 (420)
T 3vl1_A 170 ------DG----------------SNPRTLIGH-RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPH 226 (420)
T ss_dssp ------TC----------------CCCEEEECC-SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTT
T ss_pred ------CC----------------cCceEEcCC-CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCC
Confidence 11 223344555 78899999999998755331 11 11 22
Q ss_pred ---------------------CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc--cCCCCeeEEEECCCCC-EE
Q 014302 237 ---------------------GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGR-MI 292 (427)
Q Consensus 237 ---------------------~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~-~l 292 (427)
..+.+++|+|++++|++++.||.|++||+++.+..... .|...+.+++|+|+++ +|
T Consensus 227 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 306 (420)
T 3vl1_A 227 DGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYI 306 (420)
T ss_dssp CCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEE
T ss_pred CCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEE
Confidence 33444556889999999999999999999988763322 5788999999999999 77
Q ss_pred EEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce
Q 014302 293 LLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL 372 (427)
Q Consensus 293 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~ 372 (427)
++++ .++.+++|++......+. .....+...|..+.| +++++|++ ++.| ++|++|++.....
T Consensus 307 ~~g~-~dg~i~vwd~~~~~~~~~----------~~~~~~~~~v~~~~~-~~~~~l~s---~~~d---~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 307 YAGY-ENGMLAQWDLRSPECPVG----------EFLINEGTPINNVYF-AAGALFVS---SGFD---TSIKLDIISDPES 368 (420)
T ss_dssp EEEE-TTSEEEEEETTCTTSCSE----------EEEESTTSCEEEEEE-ETTEEEEE---ETTT---EEEEEEEECCTTC
T ss_pred EEEe-CCCeEEEEEcCCCcCchh----------hhhccCCCCceEEEe-CCCCEEEE---ecCC---ccEEEEeccCCCC
Confidence 7664 555888888876421110 001113347788855 57888888 6777 8899999976321
Q ss_pred ---EEEee-eeeeeCCCCCCCceeEEeccCCC-CCceeEEEeeCceEEEEec
Q 014302 373 ---ISLSL-IGFIRGPGDNPKPVAFSFHDKFK-QGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 373 ---~~~~~-~~~~~~~~~~~~~~~~~f~~~~~-~g~~l~v~~~~g~i~~~~~ 419 (427)
+.... ...+.+ ......+++|.|+.. .|.++++| ++|.+.+|.+
T Consensus 369 ~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~g~l~a~g-~~g~~~~~~~ 417 (420)
T 3vl1_A 369 ERPAIEFETPTFLVS--NDDAVSQFCYVSDDESNGEVLEVG-KNNFCALYNL 417 (420)
T ss_dssp CSCEECTTSCEEECC--SSCCCCEEEEECCSSSSCEEEEEE-TTTEEEEEES
T ss_pred CccceeccCccEEcc--CCcceEEEEEccCCCCcceEEEEc-CCceEEEEec
Confidence 11111 111222 223356889999743 23578877 8999999986
No 51
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=1e-26 Score=220.28 Aligned_cols=221 Identities=15% Similarity=0.239 Sum_probs=167.4
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|+|++||+|+.|++|+|||+... .......+|...|.+++|+|++..+++++.++.|++||+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~------- 195 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR------- 195 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-------
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC-------
Confidence 5899999999999999999999999999876 5556667899999999999999656666677999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC-CCCCcccCc--------------e---E-------Eec
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRFPGLGT--------------P---I-------RRG 235 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~--------------~---~-------~~~ 235 (427)
++ .+...+. ....+.+++|+| +|++++.+. . + ..|
T Consensus 196 --~~----------------~~~~~~~--~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h 255 (393)
T 1erj_A 196 --TG----------------QCSLTLS--IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGH 255 (393)
T ss_dssp --TT----------------EEEEEEE--CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCC
T ss_pred --CC----------------eeEEEEE--cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCC
Confidence 11 2222222 255688999999 888755331 1 1 246
Q ss_pred cCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc-------------cccccCCCCeeEEEECCCCCEEEEEEcCCcee
Q 014302 236 FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-------------EPWSSTSGFVTGATWDPEGRMILLAFAGSLTL 302 (427)
Q Consensus 236 ~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~-------------~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i 302 (427)
...|.+++|+|+|++|++++.|+.|++||+++... ..+.+|...|.+++|+|++++|++++. ++.+
T Consensus 256 ~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~-D~~v 334 (393)
T 1erj_A 256 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK-DRGV 334 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET-TSEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC-CCeE
Confidence 77899999999999999999999999999976432 123478899999999999999998754 4488
Q ss_pred eeeeeCCCCCCccccccccccccceeeccCCceeEEEECC------CCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 303 GSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDA------SGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp------~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
++|++...... .....+.+.|.+++|++ ++++||+ ++.| |+|+||+++.
T Consensus 335 ~iwd~~~~~~~------------~~l~~h~~~v~~v~~~~~~~~~p~~~~l~s---gs~D---g~i~iW~~~~ 389 (393)
T 1erj_A 335 LFWDKKSGNPL------------LMLQGHRNSVISVAVANGSSLGPEYNVFAT---GSGD---CKARIWKYKK 389 (393)
T ss_dssp EEEETTTCCEE------------EEEECCSSCEEEEEECSSCTTCTTCEEEEE---EETT---SEEEEEEEEE
T ss_pred EEEECCCCeEE------------EEECCCCCCEEEEEecCCcCcCCCCCEEEE---ECCC---CcEEECcccc
Confidence 88887654210 01112445889999876 6888988 6666 7799999864
No 52
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=1.1e-25 Score=206.29 Aligned_cols=263 Identities=12% Similarity=0.224 Sum_probs=186.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
-.++|+||+++ +||+| .|++|+|||+.++.........+|...|++++|+|+++.+++++.|+.|++|++.
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~------- 97 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ------- 97 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETT-------
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecC-------
Confidence 45789999986 77776 5999999999887332333445788899999999999544444566999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC------------------ceEEeccCCeEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG------------------TPIRRGFGGLSIL 242 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~------------------~~~~~~~~~v~~~ 242 (427)
++ ..+..+..| ...+.++.+ ++..++.+ ..+..|...+..+
T Consensus 98 --~~----------------~~~~~~~~h-~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (318)
T 4ggc_A 98 --QQ----------------KRLRNMTSH-SARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGL 156 (318)
T ss_dssp --TT----------------EEEEEEECC-SSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE
T ss_pred --Cc----------------eeEEEecCc-cceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEE
Confidence 11 333444444 444444433 23332211 1245578889999
Q ss_pred EEccCCCEEEEEecCCcEEEEEcCCCCccc-----cccCCCCeeEEEECCCCCEEEE--EEcCCceeeeeeeCCCCCCcc
Q 014302 243 KWSPTGDYFFAAKFDGTFYLWETNTWTSEP-----WSSTSGFVTGATWDPEGRMILL--AFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 243 ~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~-----~~~~~~~v~~v~~spdg~~l~~--~~~~~~~i~~~~~~~~~~~~~ 315 (427)
.+++++++|++++.|+.|++||+++++... ...+...|..++++|++..++. +++.++.+++|+......
T Consensus 157 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~--- 233 (318)
T 4ggc_A 157 RWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--- 233 (318)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---
T ss_pred EEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---
Confidence 999999999999999999999998876522 2267788999999998765543 234445677776554311
Q ss_pred ccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEe
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 395 (427)
.....+...+..+.|+|+++.++++. ++.| +.|+|||++++.++. .+.+... ...+++|
T Consensus 234 ----------~~~~~~~~~v~~~~~~~~~~~~~~~s-g~~d---~~i~iwd~~~~~~~~-----~l~gH~~--~V~~l~~ 292 (318)
T 4ggc_A 234 ----------LSAVDAHSQVCSILWSPHYKELISGH-GFAQ---NQLVIWKYPTMAKVA-----ELKGHTS--RVLSLTM 292 (318)
T ss_dssp ----------EEEEECSSCEEEEEEETTTTEEEEEE-CTTT---CCEEEEETTTCCEEE-----EECCCSS--CEEEEEE
T ss_pred ----------cccccceeeeeeeeecccccceEEEE-EcCC---CEEEEEECCCCcEEE-----EEcCCCC--CEEEEEE
Confidence 11223344789999999999998742 4455 679999999887763 2334333 3678999
Q ss_pred ccCCCCCceeEEEeeCceEEEEecc
Q 014302 396 HDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 396 ~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+|+ |..|+.|..||.|.+|+++
T Consensus 293 spd---g~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 293 SPD---GATVASAAADETLRLWRCF 314 (318)
T ss_dssp CTT---SSCEEEEETTTEEEEECCS
T ss_pred cCC---CCEEEEEecCCeEEEEECC
Confidence 986 7789999999999999974
No 53
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=1e-26 Score=217.33 Aligned_cols=280 Identities=15% Similarity=0.174 Sum_probs=195.1
Q ss_pred ceeeeEEcCC----CCEEEEEeCCCeEEEEEccCCCCcceee---ccCCcCCeeEEEEccCCC---ceEEEe-cCCeEEE
Q 014302 101 DLQGVSWHQH----KHIVAFISGSTQVIVRDYEDSGKDACIL---TSDSQRDVKVLEWRPNGG---RSLSVG-CKGGICI 169 (427)
Q Consensus 101 ~V~~l~~sp~----g~~lat~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~v~~l~~sp~~~---~~la~g-~~~~i~i 169 (427)
.|++++|+|+ ...+++++.++.|+||++.......... ...|...|++++|+|++. .+|++| .++.|++
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v 99 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRI 99 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEE
Confidence 8999999994 3456666667799999998662211111 112668899999999942 355555 5699999
Q ss_pred EeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC-CCCCcccCc--------------e---
Q 014302 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRFPGLGT--------------P--- 231 (427)
Q Consensus 170 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~--------------~--- 231 (427)
|++. ++ ..+..+..| ...|.+++|+| ++++++++. .
T Consensus 100 ~d~~---------~~----------------~~~~~~~~~-~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 100 INPI---------TM----------------QCIKHYVGH-GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp ECTT---------TC----------------CEEEEEESC-CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEch---------hc----------------eEeeeecCC-CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE
Confidence 9987 11 334445555 88999999999 888755331 1
Q ss_pred E---EeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc-----------------------------cCCCC
Q 014302 232 I---RRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-----------------------------STSGF 279 (427)
Q Consensus 232 ~---~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~-----------------------------~~~~~ 279 (427)
+ ..|...|.+++|+|++++|++++.||.|++||+++.+..... .|...
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred ecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 2 247789999999999999999999999999999876542111 28899
Q ss_pred eeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccc-ccccce-eeccCCceeEEEECCC--CCEEEEEEecCC
Q 014302 280 VTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPV-DLPDIV-SLTGSQGIEKIAWDAS--GERLAVSYKGGD 355 (427)
Q Consensus 280 v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~i~~v~~sp~--g~~La~~~~~~~ 355 (427)
|.+++|+ +++++++ +.++.+.+|++......+....... ...... ...+...|.+++|+|+ +++|++ ++.
T Consensus 234 v~~~~~~--~~~l~~~-~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~---~~~ 307 (366)
T 3k26_A 234 VDCVRWL--GDLILSK-SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL---GNQ 307 (366)
T ss_dssp CCEEEEE--TTEEEEE-CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE---ECT
T ss_pred EEEEEEc--CCEEEEE-ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE---Eec
Confidence 9999998 6788766 4556899999877533221110000 000011 2234557999999999 999999 666
Q ss_pred CcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 356 DIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 356 d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
| |.|++||+.++...... ...+.+........+++|.|+ +..|++|..||.|.+|++
T Consensus 308 d---g~i~vwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 308 V---GKLYVWDLEVEDPHKAK-CTTLTHHKCGAAIRQTSFSRD---SSILIAVCDDASIWRWDR 364 (366)
T ss_dssp T---SCEEEEECCSSSGGGCE-EEEECCTTCCSCEEEEEECTT---SSEEEEEETTSEEEEEEC
T ss_pred C---CcEEEEECCCCCCcccc-ceEEcccccCCceEEEEeCCC---CCeEEEEeCCCEEEEEEe
Confidence 6 66999999887543111 112223322344778999985 778999999999999986
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.8e-27 Score=226.36 Aligned_cols=293 Identities=11% Similarity=0.085 Sum_probs=191.9
Q ss_pred ceeeeEEcC-CCCEEEEEeCCCeEEEEEccC---CCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccC--
Q 014302 101 DLQGVSWHQ-HKHIVAFISGSTQVIVRDYED---SGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY-- 174 (427)
Q Consensus 101 ~V~~l~~sp-~g~~lat~~~d~~v~vwd~~~---~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~-- 174 (427)
.|++++|+| ++++||+|+.|++|+|||+.. ...........|...|++++|+|++..+++++.++.|++|++..
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~ 144 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQ 144 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEE
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEecccc
Confidence 899999999 999999999999999999976 32111223335899999999999995555555679999999951
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhccc---CCCceeeeE--eCCCCCCcccCc-----------------eE
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQ---NGEQITALS--WGPDGRFPGLGT-----------------PI 232 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~--~spdg~~l~~~~-----------------~~ 232 (427)
.+.......+ ..+..+... ....+.++. +++++.+++.+. .+
T Consensus 145 ~~~~~~~~~~----------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 145 QESEVKFLNC----------------ECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp ETTEEEEEEE----------------EEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCceeecccc----------------ceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 1110000000 111111111 244555555 567776644321 13
Q ss_pred Ee--ccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccc-cc-cCCCCeeEEEECC----CCCEEEEEEcCCceeee
Q 014302 233 RR--GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WS-STSGFVTGATWDP----EGRMILLAFAGSLTLGS 304 (427)
Q Consensus 233 ~~--~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~-~~-~~~~~v~~v~~sp----dg~~l~~~~~~~~~i~~ 304 (427)
.. |...|.+++|+|++++|++++.||.|++||+++++... +. .|...|.+++|+| ++++|+++ +.++.+++
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~-~~dg~i~i 287 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGG-SSKTFLTI 287 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEE-STTEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEE-cCCCcEEE
Confidence 34 67899999999999999999999999999999877643 22 6777899996654 67777765 56668999
Q ss_pred eeeCCCCC--Cccccccccc---c-------cccee--eccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 305 IHFASKPP--SLDAHLLPVD---L-------PDIVS--LTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 305 ~~~~~~~~--~~~~~~~~~~---~-------~~~~~--~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
|++..... .+.+|...+. + ..... ..+...|.+++|+ ++++|++ ++.| +.|++||+.++
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s---~~~d---~~i~~wd~~~~ 360 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLT---DEAT---SSIVMFSLNEL 360 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEE---EGGG---TEEEEEETTCG
T ss_pred EEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEe---cCCC---CeEEEEECCCc
Confidence 98875421 2222221110 0 00001 1144579999999 7888888 6666 67999999887
Q ss_pred ceEEEeeee-----------------e-eeC------------CCCCCCceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 371 PLISLSLIG-----------------F-IRG------------PGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 371 ~~~~~~~~~-----------------~-~~~------------~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
......... + ... ........+++|.+. ..+.+|+.|..||.|.+|.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~-~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 361 SSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV-DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp GGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES-SSSEEEEEEETTSCEEEEC
T ss_pred ccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc-CCceEEEEEcCCceEEEeC
Confidence 654322100 0 000 012234567888876 3366899999999999984
No 55
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.3e-26 Score=219.24 Aligned_cols=262 Identities=17% Similarity=0.272 Sum_probs=187.7
Q ss_pred ceeeeEEcCCCC-EEEEEeCCCeEEEEEc----cCCCC-----cceeecc---------CCcCCeeEEEEccCCCceEEE
Q 014302 101 DLQGVSWHQHKH-IVAFISGSTQVIVRDY----EDSGK-----DACILTS---------DSQRDVKVLEWRPNGGRSLSV 161 (427)
Q Consensus 101 ~V~~l~~sp~g~-~lat~~~d~~v~vwd~----~~~~~-----~~~~~~~---------~~~~~v~~l~~sp~~~~~la~ 161 (427)
.|++++|+|+++ +||+++.|+.|+||++ ..+.. ....+.. +|...|++++|+|++..++++
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 126 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTG 126 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEE
Confidence 799999999999 9999999999999999 66521 1111111 157799999999999544444
Q ss_pred ecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------
Q 014302 162 GCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT----------- 230 (427)
Q Consensus 162 g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~----------- 230 (427)
+.++.|++|+.. + .....+..| ...|.+++|+|+++++..+.
T Consensus 127 ~~dg~i~i~~~~----------~----------------~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 127 VENGELRLWNKT----------G----------------ALLNVLNFH-RAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp ETTSCEEEEETT----------S----------------CEEEEECCC-CSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred eCCCeEEEEeCC----------C----------------CeeeeccCC-CccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 556899999954 1 223334444 78899999999998755331
Q ss_pred ---e---EEeccCC---------------eEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCC
Q 014302 231 ---P---IRRGFGG---------------LSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPE 288 (427)
Q Consensus 231 ---~---~~~~~~~---------------v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spd 288 (427)
. +..+... +.+++|+|++ .+++++.++.|++||+++.+.. .+..|...|.+++|+|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT 258 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence 1 1112233 8889999985 5788889999999999987764 34478899999999999
Q ss_pred CCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 289 GRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 289 g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
+++|++++. ++.+++|++...... .....+...|.+++|+|++ +|++ ++.| +.|++||++
T Consensus 259 ~~~l~~~~~-d~~i~i~d~~~~~~~------------~~~~~~~~~i~~~~~~~~~-~l~~---~~~d---~~i~i~d~~ 318 (425)
T 1r5m_A 259 NKLLLSASD-DGTLRIWHGGNGNSQ------------NCFYGHSQSIVSASWVGDD-KVIS---CSMD---GSVRLWSLK 318 (425)
T ss_dssp TTEEEEEET-TSCEEEECSSSBSCS------------EEECCCSSCEEEEEEETTT-EEEE---EETT---SEEEEEETT
T ss_pred CCEEEEEcC-CCEEEEEECCCCccc------------eEecCCCccEEEEEECCCC-EEEE---EeCC---CcEEEEECC
Confidence 999988754 447888877654211 0111234589999999999 7777 4555 679999998
Q ss_pred cCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 369 RTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
++..+.. +.... ....+++|.|+ +.+|+++..+|.|.+|++.
T Consensus 319 ~~~~~~~-----~~~~~--~~i~~~~~s~~---~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 319 QNTLLAL-----SIVDG--VPIFAGRISQD---GQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp TTEEEEE-----EECTT--CCEEEEEECTT---SSEEEEEETTSCEEEEECH
T ss_pred CCcEeEe-----cccCC--ccEEEEEEcCC---CCEEEEEECCCeEEEEECC
Confidence 8776532 22222 23668999986 7789999999999999974
No 56
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=1.2e-26 Score=216.58 Aligned_cols=221 Identities=12% Similarity=0.169 Sum_probs=169.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCC----CcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSG----KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~----~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~ 176 (427)
.|.+++|+|+|.+||+|+.|+.+++|++.... .........|...|.+++|+|++..+++++.+++|++||+.
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~--- 184 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVE--- 184 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETT---
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC---
Confidence 68999999999999999999999999986541 12233345689999999999999666666778999999997
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC--CCCCcccCc-----------------eEEeccC
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP--DGRFPGLGT-----------------PIRRGFG 237 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--dg~~l~~~~-----------------~~~~~~~ 237 (427)
++ .++..+..| ...|.+++|+| +|++++++. .+..|..
T Consensus 185 ------~~----------------~~~~~~~~h-~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~ 241 (354)
T 2pbi_B 185 ------SG----------------QLLQSFHGH-GADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES 241 (354)
T ss_dssp ------TC----------------CEEEEEECC-SSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred ------CC----------------eEEEEEcCC-CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence 11 344556666 67888998887 456654331 1345778
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc---cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCc
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSL 314 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~ 314 (427)
.|.+++|+|++++|++++.|++|++||++..+..... .+...+.+++|+|+|++|++++. ++.+++|++......
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-d~~i~vwd~~~~~~~- 319 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN-DYTINVWDVLKGSRV- 319 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET-TSCEEEEETTTCSEE-
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC-CCcEEEEECCCCceE-
Confidence 9999999999999999999999999999887653322 33457889999999999998754 458888887654210
Q ss_pred cccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEE
Q 014302 315 DAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYD 366 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd 366 (427)
.....+.+.|.+++|+|+|++||+ ++.| ++|+||+
T Consensus 320 -----------~~l~~h~~~v~~l~~spdg~~l~s---gs~D---~~v~vW~ 354 (354)
T 2pbi_B 320 -----------SILFGHENRVSTLRVSPDGTAFCS---GSWD---HTLRVWA 354 (354)
T ss_dssp -----------EEECCCSSCEEEEEECTTSSCEEE---EETT---SEEEEEC
T ss_pred -----------EEEECCCCcEEEEEECCCCCEEEE---EcCC---CCEEecC
Confidence 011234458999999999999999 6666 7799995
No 57
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.3e-26 Score=209.12 Aligned_cols=259 Identities=14% Similarity=0.082 Sum_probs=187.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++| |++++|++++.|+.|+|||+... ........|...|.+++|+|++..+++++.++.+++|++.....
T Consensus 20 ~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~--- 93 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ--WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG--- 93 (313)
T ss_dssp CEEEEEE-EETTEEEEEETTSEEEEEEESSS--EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT---
T ss_pred CcEEEEe-cCCCEEEEEEcCCcEEEEECCCC--EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC---
Confidence 7999999 99999999999999999999766 45555667899999999999995555555679999999872110
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc---------------eEEeccCCeEEEEEc
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT---------------PIRRGFGGLSILKWS 245 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~---------------~~~~~~~~v~~~~~s 245 (427)
......+..+ ...|.+++| +++++..+. .+..|...+.+++|+
T Consensus 94 -------------------~~~~~~~~~~-~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 94 -------------------EDPLYTLIGH-QGNVCSLSF--QDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp -------------------SCC-CEECCC-SSCEEEEEE--ETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEE
T ss_pred -------------------CCcccchhhc-ccCEEEEEe--cCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEc
Confidence 0122223344 677888888 444433221 234578899999998
Q ss_pred c-CCCEEEEEecCCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccc
Q 014302 246 P-TGDYFFAAKFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDL 323 (427)
Q Consensus 246 p-~g~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (427)
| ++++|++++.|+.|++||..... ..+. .+...+.+++|+|+++ ++++ ..++.+++|++......
T Consensus 152 ~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~-~~dg~i~i~d~~~~~~~---------- 218 (313)
T 3odt_A 152 SFSENKFLTASADKTIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISC-SNDGLIKLVDMHTGDVL---------- 218 (313)
T ss_dssp ETTTTEEEEEETTSCEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEE-ETTSEEEEEETTTCCEE----------
T ss_pred cCCCCEEEEEECCCCEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEc-cCCCeEEEEECCchhhh----------
Confidence 8 99999999999999999933222 2222 4889999999999998 6655 45558888887654210
Q ss_pred ccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCc
Q 014302 324 PDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGP 403 (427)
Q Consensus 324 ~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~ 403 (427)
.....+.+.|.+++|+|++. |++ ++.| |.|++||++++..... +..... ...+++|.|+ +.
T Consensus 219 --~~~~~~~~~i~~~~~~~~~~-l~~---~~~d---g~v~iwd~~~~~~~~~-----~~~~~~--~i~~~~~~~~---~~ 279 (313)
T 3odt_A 219 --RTYEGHESFVYCIKLLPNGD-IVS---CGED---RTVRIWSKENGSLKQV-----ITLPAI--SIWSVDCMSN---GD 279 (313)
T ss_dssp --EEEECCSSCEEEEEECTTSC-EEE---EETT---SEEEEECTTTCCEEEE-----EECSSS--CEEEEEECTT---SC
T ss_pred --hhhhcCCceEEEEEEecCCC-EEE---EecC---CEEEEEECCCCceeEE-----EeccCc--eEEEEEEccC---CC
Confidence 01112445899999999994 666 4455 7799999998876532 222222 3668999986 45
Q ss_pred eeEEEeeCceEEEEecc
Q 014302 404 LLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 404 ~l~v~~~~g~i~~~~~~ 420 (427)
+.++..||.|.+|++-
T Consensus 280 -~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 280 -IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp -EEEEETTSCEEEEESC
T ss_pred -EEEEeCCCcEEEEeCC
Confidence 4457899999999975
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=3.7e-26 Score=236.51 Aligned_cols=262 Identities=12% Similarity=0.104 Sum_probs=195.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|||++++||+++.||.|+|||+..+ ........|...|++++|+|++..+++++.++.|++|++.
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~------- 85 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN------- 85 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT-------
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCC--ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC-------
Confidence 7999999999999999999999999999876 4555556799999999999999545555566999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc------------------eEEeccCCeEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT------------------PIRRGFGGLSIL 242 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~------------------~~~~~~~~v~~~ 242 (427)
++ .....+..| ...|.+++|+|+|++++++. .+..|...+.++
T Consensus 86 --~~----------------~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 86 --TG----------------EKVVDFEAH-PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp --TC----------------CEEEEEECC-SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred --CC----------------cEEEEEecC-CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 11 234445555 78899999999998755331 234477889999
Q ss_pred EEcc-CCCEEEEEecCCcEEEEEcCCCCccccc--cCCCCeeEEEECC--CCCEEEEEEcCCceeeeeeeCCCCCCcccc
Q 014302 243 KWSP-TGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDP--EGRMILLAFAGSLTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 243 ~~sp-~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~sp--dg~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 317 (427)
+|+| +++.|++++.||.|++||+.+....... .+...+..++|+| ++.+|++++ .++.+.+|++......
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~---- 221 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKSCV---- 221 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC-TTSEEEEEETTTTEEE----
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe-CCCEEEEEECCCCcEE----
Confidence 9999 8899999999999999999877664332 4458899999999 999998765 4558888877654110
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEecc
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHD 397 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 397 (427)
.....+.+.|.+++|+|++++|++ ++.| |.|++||+.++...... ... .....+++|+|
T Consensus 222 --------~~~~~~~~~v~~~~~~~~~~~l~~---~~~d---g~v~vwd~~~~~~~~~~-----~~~--~~~v~~~~~~~ 280 (814)
T 3mkq_A 222 --------ATLEGHMSNVSFAVFHPTLPIIIS---GSED---GTLKIWNSSTYKVEKTL-----NVG--LERSWCIATHP 280 (814)
T ss_dssp --------EEEECCSSCEEEEEECSSSSEEEE---EETT---SCEEEEETTTCSEEEEE-----CCS--SSSEEEEEECT
T ss_pred --------EEEcCCCCCEEEEEEcCCCCEEEE---EeCC---CeEEEEECCCCcEEEEe-----ecC--CCcEEEEEEcc
Confidence 011123458999999999999998 4555 66999999987765322 222 22467899998
Q ss_pred CCCCCc-eeEEEeeCceEEEEec
Q 014302 398 KFKQGP-LLSVCWSSGFCCTYPL 419 (427)
Q Consensus 398 ~~~~g~-~l~v~~~~g~i~~~~~ 419 (427)
+. .. +++++ .++.+.+|.+
T Consensus 281 ~~--~~~~~~~~-~~~~~~~~~~ 300 (814)
T 3mkq_A 281 TG--RKNYIASG-FDNGFTVLSL 300 (814)
T ss_dssp TC--GGGEEEEE-ETTEEEEEEC
T ss_pred CC--CceEEEEE-eCCCEEEEEc
Confidence 62 23 36666 5666766664
No 59
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.7e-26 Score=213.55 Aligned_cols=230 Identities=17% Similarity=0.286 Sum_probs=159.1
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCC-----CcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSG-----KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~-----~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~ 175 (427)
.|++++|+|++++||+|+.|++|+||++.... ........+|...|.+++|+|++..+++++.|+.|++|++...
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 79999999999999999999999999986431 1234455689999999999999954444455699999999511
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-------------------eEEecc
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-------------------PIRRGF 236 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-------------------~~~~~~ 236 (427)
+....++..+..| ...|.+++|+|++++++++. .+..|.
T Consensus 140 ---------------------~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~ 197 (330)
T 2hes_X 140 ---------------------GEEYECISVLQEH-SQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHE 197 (330)
T ss_dssp ---------------------CCCCEEEEEECCC-SSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred ---------------------CCCeEEEEEeccC-CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCC
Confidence 1122344556666 78899999999998865432 123477
Q ss_pred CCeEEEEEccC--CCEEEEEecCCcEEEEEcCCCCc--------c-ccc-cCCCCeeEEEECCCCCEEEEEEcCCceeee
Q 014302 237 GGLSILKWSPT--GDYFFAAKFDGTFYLWETNTWTS--------E-PWS-STSGFVTGATWDPEGRMILLAFAGSLTLGS 304 (427)
Q Consensus 237 ~~v~~~~~sp~--g~~l~~~~~dg~v~iwd~~~~~~--------~-~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~ 304 (427)
..|.+++|+|+ +.+|++++.|++|++||++.... . .+. .|...|.+++|++++ .|++++ .++.+++
T Consensus 198 ~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~-~dg~v~i 275 (330)
T 2hes_X 198 GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVG-ADGVLAV 275 (330)
T ss_dssp SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEE-TTSCEEE
T ss_pred CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEe-CCCEEEE
Confidence 89999999999 67899999999999999976421 1 122 388899999999765 666654 5558888
Q ss_pred eeeCCCCCCccccccccccccceeeccCC-ceeEEEECC--CCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 305 IHFASKPPSLDAHLLPVDLPDIVSLTGSQ-GIEKIAWDA--SGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~v~~sp--~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
|+........ . ......+.. .|.+++|+| ++++||+ ++.| |+|+||+++.
T Consensus 276 w~~~~~~~~~----~-----~~~~~~h~~~~v~~v~~~~~~~~~~las---~s~D---g~v~~W~~~~ 328 (330)
T 2hes_X 276 YEEVDGEWKV----F-----AKRALCHGVYEINVVKWLELNGKTILAT---GGDD---GIVNFWSLEK 328 (330)
T ss_dssp EEEETTEEEE----E-----EEESCTTTTSCEEEEEEC-----CCEEE---EETT---SEEEEEEC--
T ss_pred EEcCCCceEE----E-----eccccccccceEEEEEEecCCCceEEEE---ecCC---CcEEEEEecc
Confidence 8875431000 0 000112333 789999999 7889988 6666 7799999864
No 60
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=7.1e-26 Score=206.84 Aligned_cols=231 Identities=14% Similarity=0.191 Sum_probs=173.7
Q ss_pred ceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCce
Q 014302 135 ACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQI 214 (427)
Q Consensus 135 ~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 214 (427)
......+|...|++++|+|+++.+++++.++.|++|++. ++ ..+..+..+ ..+|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~---------~~----------------~~~~~~~~~-~~~v 58 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE---------TQ----------------VEVRSIQVT-ETPV 58 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETT---------TT----------------EEEEEEECC-SSCE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECC---------CC----------------ceeEEeecc-CCcE
Confidence 344556799999999999999555555567999999997 11 334445555 7789
Q ss_pred eeeEeCCCCCCcccCc-----------------eEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc--ccccc
Q 014302 215 TALSWGPDGRFPGLGT-----------------PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS--EPWSS 275 (427)
Q Consensus 215 ~~~~~spdg~~l~~~~-----------------~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~--~~~~~ 275 (427)
.+++|+|++++++++. .+..|...|.+++|+|++++|++++.|++|++||+++... ..+..
T Consensus 59 ~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~ 138 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG 138 (304)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC
T ss_pred EEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc
Confidence 9999999998865432 2456888999999999999999999999999999987744 33458
Q ss_pred CCCCeeEEEECC-CCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECC--CCCEEEEEEe
Q 014302 276 TSGFVTGATWDP-EGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDA--SGERLAVSYK 352 (427)
Q Consensus 276 ~~~~v~~v~~sp-dg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp--~g~~La~~~~ 352 (427)
|...|.+++|+| ++..|++++ .++.+++|++......... ...+...+..++|+| ++++|++
T Consensus 139 h~~~v~~v~~~p~~~~~l~sgs-~D~~v~iwd~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~~~l~s--- 203 (304)
T 2ynn_A 139 HEHFVMCVAFNPKDPSTFASGC-LDRTVKVWSLGQSTPNFTL-----------TTGQERGVNYVDYYPLPDKPYMIT--- 203 (304)
T ss_dssp CCSCEEEEEECTTCTTEEEEEE-TTSEEEEEETTCSSCSEEE-----------ECCCTTCEEEEEECCSTTCCEEEE---
T ss_pred cCCcEEEEEECCCCCCEEEEEe-CCCeEEEEECCCCCcccee-----------ccCCcCcEEEEEEEEcCCCCEEEE---
Confidence 999999999999 567888765 5558888887654221110 011223688899986 7889988
Q ss_pred cCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 353 GGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 353 ~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
++.| ++|++||++++.++. .+.+... ...+++|+|+ +.+|+.|..||.|.+|++
T Consensus 204 ~s~D---~~i~iWd~~~~~~~~-----~~~~h~~--~v~~~~~~p~---~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 204 ASDD---LTIKIWDYQTKSCVA-----TLEGHMS--NVSFAVFHPT---LPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp EETT---SEEEEEETTTTEEEE-----EEECCSS--CEEEEEECSS---SSEEEEEETTSCEEEEET
T ss_pred EcCC---CeEEEEeCCCCccce-----eeCCCCC--CEEEEEECCC---CCEEEEEcCCCeEEEEEC
Confidence 5666 779999999887652 2333332 3568899996 678999999999999985
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=1.3e-25 Score=213.24 Aligned_cols=251 Identities=18% Similarity=0.245 Sum_probs=178.6
Q ss_pred CCCCC--ceeeeEEcC-CCCEEEEEeCCCeEEEEEccCCCC-----cceeeccCCcCCeeEEEEccCCCceEEEe-cCCe
Q 014302 96 LLPEV--DLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSGK-----DACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGG 166 (427)
Q Consensus 96 ~l~~~--~V~~l~~sp-~g~~lat~~~d~~v~vwd~~~~~~-----~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~ 166 (427)
.+.+| .|++++|+| ++++||+|+.|++|+||++..... .......+|...|.+++|+|++..+|+++ .++.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 34445 899999999 899999999999999999987632 23445567999999999999985566655 5699
Q ss_pred EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc
Q 014302 167 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP 246 (427)
Q Consensus 167 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp 246 (427)
|++||+. .+ .....+. ...|...|.+++|+|
T Consensus 156 i~iwd~~---------~~----------------~~~~~~~------------------------~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 156 ILVWDVG---------TG----------------AAVLTLG------------------------PDVHPDTIYSVDWSR 186 (402)
T ss_dssp EEEEETT---------TT----------------EEEEEEC------------------------TTTCCSCEEEEEECT
T ss_pred EEEEECC---------CC----------------CccEEEe------------------------cCCCCCceEEEEECC
Confidence 9999997 11 1121110 022567899999999
Q ss_pred CCCEEEEEecCCcEEEEEcCCCCccc-c-ccCCCC-eeEEEECCCCCEEEEEE--cCCceeeeeeeCCCCCCcccccccc
Q 014302 247 TGDYFFAAKFDGTFYLWETNTWTSEP-W-SSTSGF-VTGATWDPEGRMILLAF--AGSLTLGSIHFASKPPSLDAHLLPV 321 (427)
Q Consensus 247 ~g~~l~~~~~dg~v~iwd~~~~~~~~-~-~~~~~~-v~~v~~spdg~~l~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~ 321 (427)
++++|++++.|+.|++||+++++... + ..|... +..++|+|++++|+++. ..++.+.+|++......+.
T Consensus 187 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~------ 260 (402)
T 2aq5_A 187 DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLS------ 260 (402)
T ss_dssp TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE------
T ss_pred CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCce------
Confidence 99999999999999999999887643 3 356555 89999999999888764 4566888888766421110
Q ss_pred ccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCC
Q 014302 322 DLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQ 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 401 (427)
.....+...|.+++|+|++++|+++ ++.| +.|++||+.++........++ .......+++|.|+
T Consensus 261 ----~~~~~~~~~v~~~~~s~~~~~l~~~--g~~d---g~i~i~d~~~~~~~~~~l~~~----~~~~~v~~~~~sp~--- 324 (402)
T 2aq5_A 261 ----LQELDTSSGVLLPFFDPDTNIVYLC--GKGD---SSIRYFEITSEAPFLHYLSMF----SSKESQRGMGYMPK--- 324 (402)
T ss_dssp ----EEECCCCSSCEEEEEETTTTEEEEE--ETTC---SCEEEEEECSSTTCEEEEEEE----CCSSCCSEEEECCG---
T ss_pred ----EEeccCCCceeEEEEcCCCCEEEEE--EcCC---CeEEEEEecCCCcceEeeccc----ccCCcccceEEecc---
Confidence 1112344578999999999999875 5556 669999999877311111111 11223568999986
Q ss_pred CceeEEEeeCceEEEEec
Q 014302 402 GPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 402 g~~l~v~~~~g~i~~~~~ 419 (427)
+.+++ ..++.+.+|.+
T Consensus 325 ~~~~~--s~~~~~~~~~l 340 (402)
T 2aq5_A 325 RGLEV--NKCEIARFYKL 340 (402)
T ss_dssp GGSCG--GGTEEEEEEEE
T ss_pred cccce--ecceeEEEEEc
Confidence 44443 25667777765
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7e-26 Score=221.14 Aligned_cols=274 Identities=11% Similarity=0.078 Sum_probs=185.6
Q ss_pred ceeeeEEcCC------CCEEEEEeCCCeEEEEEccCCCCc---------ceeeccCCcCCeeEEEEccCCCceEEEecCC
Q 014302 101 DLQGVSWHQH------KHIVAFISGSTQVIVRDYEDSGKD---------ACILTSDSQRDVKVLEWRPNGGRSLSVGCKG 165 (427)
Q Consensus 101 ~V~~l~~sp~------g~~lat~~~d~~v~vwd~~~~~~~---------~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~ 165 (427)
.|.+++|+|+ +.+||+++.|++|+|||+...... +.....+|...|++++|+|++ .+++++.|+
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCC
Confidence 6999999997 579999999999999999765211 122445788999999999875 554555669
Q ss_pred eEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeee--EeCCCC-CCcccCc------------
Q 014302 166 GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITAL--SWGPDG-RFPGLGT------------ 230 (427)
Q Consensus 166 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~spdg-~~l~~~~------------ 230 (427)
+|++||+.. + . .+...+..| ...|.++ +|+|+| .+++++.
T Consensus 288 tV~lWD~~~---------~--------------~-~~~~~~~~H-~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 288 FVAEFDLTD---------P--------------E-VPSFYDQVH-DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp EEEEEETTB---------C--------------S-SCSEEEECS-SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred EEEEEECCC---------C--------------C-CceEEeecc-cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 999999971 1 0 112224455 7789988 678888 7665442
Q ss_pred -----eEEeccC--CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc-cccccCCCCeeEEEECCCCCEEEEEEcCCcee
Q 014302 231 -----PIRRGFG--GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTL 302 (427)
Q Consensus 231 -----~~~~~~~--~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i 302 (427)
.+..|.. .+.+++|+|+++.|++++.|++|++||+++..+ ..+.+|...|.+++|+|+|++|++++ .++.+
T Consensus 343 ~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs-~Dgtv 421 (524)
T 2j04_B 343 IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGS-ADGSL 421 (524)
T ss_dssp HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEE-TTTEE
T ss_pred CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEE-CCCEE
Confidence 1233432 478999999999999999999999999998876 44558999999999999999998775 45577
Q ss_pred eeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec-cCceEEEeeeeee
Q 014302 303 GSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR-RTPLISLSLIGFI 381 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~-~~~~~~~~~~~~~ 381 (427)
++|++..+ .+.++.. .........|.+++|+|+|+.+.. .. + +.+|+.. ++.++ ..+
T Consensus 422 ~lwd~~~~--~~~~~~~------~~~~~~~~~v~~v~~sp~g~~~~~---~~-~-----~~~~~~~~~g~~~-----~~l 479 (524)
T 2j04_B 422 IITNAARR--LLHGIKN------SSATQKSLRLWKWDYSIKDDKYRI---DS-S-----YEVYPLTVNDVSK-----AKI 479 (524)
T ss_dssp ECCBSCSS--TTTCC------------CCCCEEEECBCCSSSCEEEE---CC-C-----CCCCC----------------
T ss_pred EEEechHh--hcccccc------CccceeeeEEEEeccCCCCCeEEc---cC-C-----ceecccccCCcce-----eee
Confidence 77776443 1111100 000001124689999999996633 21 1 3344332 12221 112
Q ss_pred eCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEeccccCCC
Q 014302 382 RGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIFRSHL 425 (427)
Q Consensus 382 ~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~~~~~ 425 (427)
.+... ...+++|+|+...+.+||.|..+|.|.+|.|--+-|+
T Consensus 480 ~gh~~--~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~~~ 521 (524)
T 2j04_B 480 DAHGI--NITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEHHH 521 (524)
T ss_dssp --CCC--SCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC---
T ss_pred cCCCc--eEEEEECCCCCCccHHHHhhccCceEEEEEccccccc
Confidence 23332 3568999998766889999999999999999887665
No 63
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=6.1e-26 Score=212.69 Aligned_cols=196 Identities=13% Similarity=0.082 Sum_probs=148.0
Q ss_pred ceeeeEEcCCCCEEEEEe--CCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFIS--GSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.+++++|||||++||+++ .|++|+|||+... .... ...|...|.+++|+||| ++|++++++.+.+|+..
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~--~~~~-~~~~~~~V~~v~fspdg-~~l~s~s~~~~~~~~~~----- 205 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDL--TEKF-EIETRGEVKDLHFSTDG-KVVAYITGSSLEVISTV----- 205 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTT--EEEE-EEECSSCCCEEEECTTS-SEEEEECSSCEEEEETT-----
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC--cEEE-EeCCCCceEEEEEccCC-ceEEeccceeEEEEEec-----
Confidence 588999999999887654 6899999999877 3332 23577889999999999 78888888888887765
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDG 258 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg 258 (427)
.+ ...... ....|...+.+++|+|+++++++++.|+
T Consensus 206 ----~~--------------~~~~~~--------------------------~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 206 ----TG--------------SCIARK--------------------------TDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp ----TC--------------CEEEEE--------------------------CCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred ----cC--------------cceeee--------------------------ecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 11 000000 1112455688999999999999988887
Q ss_pred ----cEEEEEcCCCCcc-----ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--C-ccccccccccccc
Q 014302 259 ----TFYLWETNTWTSE-----PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--S-LDAHLLPVDLPDI 326 (427)
Q Consensus 259 ----~v~iwd~~~~~~~-----~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~-~~~~~~~~~~~~~ 326 (427)
.+++||+...... .+..|...|.+++|+|||++|++++.+ +.+++|++.+... . +.+
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-~~V~iwd~~~~~~~~~~~~g---------- 310 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-NSIALVKLKDLSMSKIFKQA---------- 310 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-SCEEEEETTTTEEEEEETTS----------
T ss_pred cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-CEEEEEECCCCcEEEEecCc----------
Confidence 5888998776542 233788999999999999999987654 5888888776421 1 122
Q ss_pred eeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 327 VSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 327 ~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
|.+.|++|+|||||++||+ ++.| ++|+||++..+
T Consensus 311 ----H~~~V~~v~fSpdg~~laS---~S~D---~tvrvw~ip~~ 344 (365)
T 4h5i_A 311 ----HSFAITEVTISPDSTYVAS---VSAA---NTIHIIKLPLN 344 (365)
T ss_dssp ----SSSCEEEEEECTTSCEEEE---EETT---SEEEEEECCTT
T ss_pred ----ccCCEEEEEECCCCCEEEE---EeCC---CeEEEEEcCCC
Confidence 3458999999999999999 6667 78999999643
No 64
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=1.1e-25 Score=229.08 Aligned_cols=235 Identities=14% Similarity=0.179 Sum_probs=168.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++|+.|++|+|||+... .......+|...|.+++|+|++..+++++.|++|++|++.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~------- 502 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAG--VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL------- 502 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT-------
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCC--cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC-------
Confidence 7999999999999999999999999999877 4555567899999999999999666666677999999975
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCC--CcccC-----------------ceEEeccCCeEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR--FPGLG-----------------TPIRRGFGGLSI 241 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~--~l~~~-----------------~~~~~~~~~v~~ 241 (427)
.. ...........| ...|.+++|+|++. .+.++ ..+..|.+.|.+
T Consensus 503 --~~-------------~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 566 (694)
T 3dm0_A 503 --GE-------------CKYTISEGGEGH-RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVST 566 (694)
T ss_dssp --SC-------------EEEEECSSTTSC-SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred --CC-------------cceeeccCCCCC-CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEE
Confidence 00 001111112233 67799999999873 23322 123458889999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Ccccccc
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHLL 319 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~~ 319 (427)
++|+|++++|++++.||.|++||+++++......+...+.+++|+|++.+|+++ .++ .+++|++..... .+..+..
T Consensus 567 v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~~-~i~iwd~~~~~~~~~~~~~~~ 644 (694)
T 3dm0_A 567 VAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAA-TEH-GIKIWDLESKSIVEDLKVDLK 644 (694)
T ss_dssp EEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEE-ETT-EEEEEETTTTEEEEEECCCCC
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEE-cCC-CEEEEECCCCCChhhhccccc
Confidence 999999999999999999999999988875555566789999999999988765 344 588888766421 1111100
Q ss_pred cc----cccc-ceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 320 PV----DLPD-IVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 320 ~~----~~~~-~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
.. .... .....+...+++++|+|+|++|++ ++.| |+|+||++.
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s---gs~D---g~i~iW~i~ 692 (694)
T 3dm0_A 645 AEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS---GYTD---GVIRVWGIG 692 (694)
T ss_dssp ----------------CCCCEEEEEECTTSSEEEE---EETT---SEEEEEEC-
T ss_pred cccccccccccccCCceeEEeeeEEEcCCCCEEEE---EcCC---CeEEEEecc
Confidence 00 0000 000001114789999999999999 6666 789999985
No 65
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.6e-26 Score=231.05 Aligned_cols=256 Identities=15% Similarity=0.170 Sum_probs=185.4
Q ss_pred CCCC--ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEecCCeEEEEec
Q 014302 97 LPEV--DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAP 172 (427)
Q Consensus 97 l~~~--~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g~~~~i~iw~~ 172 (427)
+.+| .|++++|+|++++|++|+.||+|+||++............+|...|++++|+|+ +..+++++.++.|++|++
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 3455 899999999999999999999999999986533455566789999999999988 744455556699999999
Q ss_pred cCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC--CCE
Q 014302 173 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT--GDY 250 (427)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~--g~~ 250 (427)
. .+ ...... .+..|...|.+++|+|+ +++
T Consensus 85 ~---------~~--------------~~~~~~--------------------------~~~~h~~~V~~v~~sp~~~~~~ 115 (753)
T 3jro_A 85 E---------NG--------------RWSQIA--------------------------VHAVHSASVNSVQWAPHEYGPL 115 (753)
T ss_dssp E---------TT--------------EEEEEE--------------------------EECCCSSCEEEEEECCGGGCSE
T ss_pred C---------CC--------------cccccc--------------------------cccCCCCCeEEEEECCCCCCCE
Confidence 7 11 111111 22336678999999999 999
Q ss_pred EEEEecCCcEEEEEcCCCCc---cccccCCCCeeEEEECC-------------CCCEEEEEEcCCceeeeeeeCCCCCCc
Q 014302 251 FFAAKFDGTFYLWETNTWTS---EPWSSTSGFVTGATWDP-------------EGRMILLAFAGSLTLGSIHFASKPPSL 314 (427)
Q Consensus 251 l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~v~~v~~sp-------------dg~~l~~~~~~~~~i~~~~~~~~~~~~ 314 (427)
|++++.||.|++||+++... .....|...|.+++|+| ++..+++++. ++.+++|++.......
T Consensus 116 l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~~~~~ 194 (753)
T 3jro_A 116 LLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTY 194 (753)
T ss_dssp EEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET-TSCEEEEEEETTTTEE
T ss_pred EEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC-CCeEEEEeccCCcccc
Confidence 99999999999999988754 23337889999999999 5888887655 5588899887642110
Q ss_pred cccccccccccceeeccCCceeEEEECCC---CCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCce
Q 014302 315 DAHLLPVDLPDIVSLTGSQGIEKIAWDAS---GERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPV 391 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~i~~v~~sp~---g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (427)
.. ......+.+.|.+++|+|+ +++|++ ++.| |+|++||+.++........ ...........
T Consensus 195 ~~--------~~~~~~h~~~V~~l~~sp~~~~~~~l~s---~s~D---g~I~iwd~~~~~~~~~~~~--~~~~~~~~~v~ 258 (753)
T 3jro_A 195 VL--------ESTLEGHSDWVRDVAWSPTVLLRSYLAS---VSQD---RTCIIWTQDNEQGPWKKTL--LKEEKFPDVLW 258 (753)
T ss_dssp EE--------EEEECCCSSCEEEEEECCCCSSSEEEEE---EESS---SCEEEEEESSSSSCCBCCB--SSSSCCSSCCC
T ss_pred ee--------eeeecCCCCcEEEEEeccCCCCCCEEEE---EecC---CEEEEecCCCCCCcceeEE--eccCCCCCceE
Confidence 00 0111224558999999999 899988 4555 6699999988642111110 11111223356
Q ss_pred eEEeccCCCCCceeEEEeeCceEEEEeccc
Q 014302 392 AFSFHDKFKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 392 ~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
+++|.|+ |..|++|..||.|.+|++--
T Consensus 259 ~l~~spd---g~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 259 RASWSLS---GNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CEEECTT---TCCEEEECSSSCEECCBCCS
T ss_pred EEEEcCC---CCEEEEEcCCCEEEEEecCC
Confidence 8999986 77899999999999999763
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=3.4e-25 Score=239.61 Aligned_cols=262 Identities=11% Similarity=0.168 Sum_probs=199.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|+|++||+|+.|++|+|||+.+. .......+|...|.+++|+|++..+++++.++.|++||+.
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~------- 687 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETG--EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA------- 687 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-------
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCC--CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC-------
Confidence 8999999999999999999999999999887 4555667899999999999999544444566999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCC--CcccC--------------c---eEEeccCCeEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR--FPGLG--------------T---PIRRGFGGLSI 241 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~--~l~~~--------------~---~~~~~~~~v~~ 241 (427)
++ ..+..+..| ...|.+++|+|++. +++++ . .+..|...|.+
T Consensus 688 --~~----------------~~~~~~~~~-~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 688 --TG----------------KLVHTYDEH-SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNH 748 (1249)
T ss_dssp --TC----------------CEEEEEECC-SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEE
T ss_pred --CC----------------ceEEEEcCC-CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEE
Confidence 22 344455555 78899999999644 33222 1 23457889999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCccccc--------------cCCCCeeEEEECCCCCEEEEEEcCCceeeeeee
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--------------STSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 307 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~--------------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~ 307 (427)
++|+|++++|++++.||.|++||+++.+..... .....+.+++|+|+|+.+++++ ++.+.+|++
T Consensus 749 ~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~ 826 (1249)
T 3sfz_A 749 CRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDI 826 (1249)
T ss_dssp EEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEET
T ss_pred EEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEe
Confidence 999999999999999999999999877542111 2344788999999999999875 346777776
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCC
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDN 387 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~ 387 (427)
....... .....+.+.|.+++|+|+++++++ ++.+ |.|++|++.++..+.. +.+. .
T Consensus 827 ~~~~~~~-----------~~~~~~~~~v~~~~~sp~~~~l~~---~~~d---g~v~vwd~~~~~~~~~-----~~~h--~ 882 (1249)
T 3sfz_A 827 HTSGLLA-----------EIHTGHHSTIQYCDFSPYDHLAVI---ALSQ---YCVELWNIDSRLKVAD-----CRGH--L 882 (1249)
T ss_dssp TTCCEEE-----------EEECSSSSCCCEEEECSSTTEEEE---ECSS---SCEEEEETTTTEEEEE-----ECCC--S
T ss_pred cCCCcee-----------EEcCCCCCceEEEEEcCCCCEEEE---EeCC---CeEEEEEcCCCceeee-----cCCC--c
Confidence 6542100 011124458999999999999998 5666 6699999998765422 2222 2
Q ss_pred CCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 388 PKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 388 ~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
....+++|.|+ |..|+++..||.|.+|++
T Consensus 883 ~~v~~v~~spd---g~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 883 SWVHGVMFSPD---GSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp SCEEEEEECTT---SSEEEEEETTSCEEEEEH
T ss_pred cceEEEEECCC---CCEEEEEeCCCeEEEEEc
Confidence 23668999985 778899999999999985
No 67
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.8e-26 Score=217.93 Aligned_cols=245 Identities=9% Similarity=0.095 Sum_probs=173.6
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
..|.+++|+|||+++|+++.|++|+ |.... ....+|...|.+++|+|+| .++.+.+|+.+
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~-----~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~------ 75 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYA-----KDINCNSKNLFHVKEFPLE-------FENKLDFELAQ------ 75 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCC-----SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC------
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--ccccc-----ceecCCCccEEEEEECCCC-------CcceEEEEeCC------
Confidence 3789999999999999999999998 63333 1225899999999999998 34444445433
Q ss_pred ccccCcccccccccCCCCcceeEeehhc-ccCCCceeeeEeCCCCCCcccCce---------------EEeccC-----C
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLR-SQNGEQITALSWGPDGRFPGLGTP---------------IRRGFG-----G 238 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~l~~~~~---------------~~~~~~-----~ 238 (427)
....+. .+ ...|.+++|+|||++++++.. +. |.. .
T Consensus 76 ----------------------~~~~~~~~~-~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~s 131 (588)
T 2j04_A 76 ----------------------QNGLLNSQP-VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRT 131 (588)
T ss_dssp ----------------------SSCSSTTSC-SCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTC
T ss_pred ----------------------CceEeecCC-CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCcccccc
Confidence 011122 22 678999999999998774321 12 343 4
Q ss_pred eEEEEEccCCCEEEEEecCCcEEEEEcCCCCc--------ccc----ccCCCCeeEEEECCCCCEEEEEEcCCceeeeee
Q 014302 239 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTS--------EPW----SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIH 306 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~--------~~~----~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~ 306 (427)
+.+++|||||++||+|+.||+|+|||+..+.. ..+ .+|...|.+++|+||| ++++ +.++.+++|+
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laas-s~D~tVrlWd 208 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAA-LSNNSVFSMT 208 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEE-ETTCCEEEEC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEE-eCCCeEEEEE
Confidence 99999999999999999999999999998753 222 3677899999999999 5555 4456888888
Q ss_pred eCCCCCCccccccccccccceee--ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCC
Q 014302 307 FASKPPSLDAHLLPVDLPDIVSL--TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGP 384 (427)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~ 384 (427)
+....... ....+ .+...|.+++|+ |+.||++ + + ++|++||+.++...... .+.
T Consensus 209 ~~~~~~~~----------~~~tL~~~h~~~V~svaFs--g~~LASa---~-~---~tIkLWd~~~~~~~~~~-----~gh 264 (588)
T 2j04_A 209 VSASSHQP----------VSRMIQNASRRKITDLKIV--DYKVVLT---C-P---GYVHKIDLKNYSISSLK-----TGS 264 (588)
T ss_dssp CCSSSSCC----------CEEEEECCCSSCCCCEEEE--TTEEEEE---C-S---SEEEEEETTTTEEEEEE-----CSC
T ss_pred CCCCcccc----------ceeeecccccCcEEEEEEE--CCEEEEE---e-C---CeEEEEECCCCeEEEEE-----cCC
Confidence 87653110 00011 123479999999 6899984 3 2 56999999987764221 132
Q ss_pred CCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 385 GDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 385 ~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
.. ....++| |...++..|+++..+|. .+|.+
T Consensus 265 ~~--~V~~va~-~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 265 LE--NFHIIPL-NHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp CS--CCCEEEE-TTCSSCEEEEECSSCEE-EEEES
T ss_pred Cc--eEEEEEe-eeCCCCCEEEEEcCCCC-EEEee
Confidence 22 3557888 22334789999999999 77654
No 68
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=7.9e-25 Score=202.76 Aligned_cols=240 Identities=12% Similarity=0.052 Sum_probs=178.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCC-cceeeccCCcCCeeEEEEccCCC-ceEEEecCCeEEEEec-cCCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGK-DACILTSDSQRDVKVLEWRPNGG-RSLSVGCKGGICIWAP-SYPGN 177 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~v~~l~~sp~~~-~~la~g~~~~i~iw~~-~~~~~ 177 (427)
.|++++|+|++++|++++.|+.|+||++..... ........|...|.+++|+|++. .+++++.++.|++|++ .
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~---- 88 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG---- 88 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS----
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc----
Confidence 799999999999999999999999999987731 12344457899999999999995 4555556799999999 6
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEe--ccCCeEEEEEccCCCEEEEEe
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRR--GFGGLSILKWSPTGDYFFAAK 255 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~--~~~~v~~~~~sp~g~~l~~~~ 255 (427)
.+ . . ..+.. |...|.+++|+| +++|++++
T Consensus 89 -----~~--------------~--~---------------------------~~~~~~~~~~~v~~l~~~~-~~~l~s~~ 119 (342)
T 1yfq_A 89 -----SP--------------S--F---------------------------QALTNNEANLGICRICKYG-DDKLIAAS 119 (342)
T ss_dssp -----SS--------------S--E---------------------------EECBSCCCCSCEEEEEEET-TTEEEEEE
T ss_pred -----CC--------------c--e---------------------------EeccccCCCCceEEEEeCC-CCEEEEEc
Confidence 11 0 0 02233 667899999999 99999999
Q ss_pred cCCcEEEEEcCC---------CCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC-CCCCcccccccccccc
Q 014302 256 FDGTFYLWETNT---------WTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS-KPPSLDAHLLPVDLPD 325 (427)
Q Consensus 256 ~dg~v~iwd~~~---------~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~ 325 (427)
.|+.|++||+++ .+......+...+.+++|+|++ ++++ ..++.+.+|++.. ......
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~~---------- 186 (342)
T 1yfq_A 120 WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNGT---------- 186 (342)
T ss_dssp TTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCCE----------
T ss_pred CCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccce----------
Confidence 999999999987 6654444588999999999987 6655 4555888888876 321110
Q ss_pred ceeeccCCceeEEEECC-CCCEEEEEEecCCCcceeEEEEEEeccC------ceEEEeeeeeeeCCCC-------CCCce
Q 014302 326 IVSLTGSQGIEKIAWDA-SGERLAVSYKGGDDIYKGLIAIYDARRT------PLISLSLIGFIRGPGD-------NPKPV 391 (427)
Q Consensus 326 ~~~~~~~~~i~~v~~sp-~g~~La~~~~~~~d~~~g~i~vwd~~~~------~~~~~~~~~~~~~~~~-------~~~~~ 391 (427)
.....+...|.+++|+| ++++|++ ++.| |.|++|++... .... .+..... .....
T Consensus 187 ~~~~~~~~~i~~i~~~~~~~~~l~~---~~~d---g~i~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~ 255 (342)
T 1yfq_A 187 IEESGLKYQIRDVALLPKEQEGYAC---SSID---GRVAVEFFDDQGDDYNSSKRF-----AFRCHRLNLKDTNLAYPVN 255 (342)
T ss_dssp EEECSCSSCEEEEEECSGGGCEEEE---EETT---SEEEEEECCTTCCSTTCTTCE-----EEECCCCCTTCCSSCCCEE
T ss_pred eeecCCCCceeEEEECCCCCCEEEE---EecC---CcEEEEEEcCCCcccccccce-----eeecccccccccccceeEE
Confidence 11122344899999999 9999999 4555 67999999765 3321 1122211 22467
Q ss_pred eEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 392 AFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 392 ~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+++|.|+ +..|++|..+|.|.+|++.
T Consensus 256 ~~~~s~~---~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 256 SIEFSPR---HKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp EEEECTT---TCCEEEEETTSCEEEEETT
T ss_pred EEEEcCC---CCEEEEecCCceEEEEcCc
Confidence 8999985 6789999999999999974
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=7.4e-25 Score=219.23 Aligned_cols=273 Identities=13% Similarity=0.198 Sum_probs=197.8
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCC--cceeeccCCcCC-eeEEEEcc--CCCceEEEe-cCCeEEEEecc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGK--DACILTSDSQRD-VKVLEWRP--NGGRSLSVG-CKGGICIWAPS 173 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~-v~~l~~sp--~~~~~la~g-~~~~i~iw~~~ 173 (427)
..|++++|+|+|++||+++ ++.|+||++..... .......+|... |++++|+| ++ .+|+++ .++.|++|++.
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCC
Confidence 4799999999999999998 88999999985411 344556789999 99999999 99 555555 56999999995
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-------------------eEEe
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-------------------PIRR 234 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-------------------~~~~ 234 (427)
.... ...........+..+ ...|.+++|+|+|++++.+. .+..
T Consensus 97 ~~~~-----------------~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~ 158 (615)
T 1pgu_A 97 FDKE-----------------SNSVEVNVKSEFQVL-AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSG 158 (615)
T ss_dssp EEGG-----------------GTEEEEEEEEEEECC-SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCS
T ss_pred CCcc-----------------cccccccccchhhcc-cccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeec
Confidence 0000 000011334445555 78899999999999865432 1234
Q ss_pred ccCCeEEEEEccCCC-EEEEEecCCcEEEEEcCCCCcc-ccccCCC---CeeEEEECCC-CCEEEEEEcCCceeeeeeeC
Q 014302 235 GFGGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWTSE-PWSSTSG---FVTGATWDPE-GRMILLAFAGSLTLGSIHFA 308 (427)
Q Consensus 235 ~~~~v~~~~~sp~g~-~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~---~v~~v~~spd-g~~l~~~~~~~~~i~~~~~~ 308 (427)
|...|.+++|+|+++ .|++++.|+.|++||+++.+.. .+..|.. .|.+++|+|+ +++|++++. ++.+++|++.
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~vwd~~ 237 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-DRKISCFDGK 237 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-TCCEEEEETT
T ss_pred CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-CCeEEEEECC
Confidence 778899999999998 7889999999999999887764 3346777 8999999999 999988755 4588888876
Q ss_pred CCCCCccccccccccccceee-----ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeC
Q 014302 309 SKPPSLDAHLLPVDLPDIVSL-----TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRG 383 (427)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~ 383 (427)
.... ...+ .+...|.+++|+ ++++|++ ++.| +.|++||++++..+...... .
T Consensus 238 ~~~~-------------~~~~~~~~~~~~~~v~~~~~~-~~~~l~~---~~~d---~~i~~wd~~~~~~~~~~~~~---~ 294 (615)
T 1pgu_A 238 SGEF-------------LKYIEDDQEPVQGGIFALSWL-DSQKFAT---VGAD---ATIRVWDVTTSKCVQKWTLD---K 294 (615)
T ss_dssp TCCE-------------EEECCBTTBCCCSCEEEEEES-SSSEEEE---EETT---SEEEEEETTTTEEEEEEECC---T
T ss_pred CCCE-------------eEEecccccccCCceEEEEEc-CCCEEEE---EcCC---CcEEEEECCCCcEEEEEcCC---C
Confidence 5421 0111 344589999999 9999999 4555 67999999987765322111 0
Q ss_pred CCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 384 PGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 384 ~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
........++.|. .+..++++..+|.|.+|++.
T Consensus 295 ~~~~~~~~~~~~~----~~~~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 295 QQLGNQQVGVVAT----GNGRIISLSLDGTLNFYELG 327 (615)
T ss_dssp TCGGGCEEEEEEE----ETTEEEEEETTSCEEEEETT
T ss_pred CcccCceeEEEeC----CCCeEEEEECCCCEEEEECC
Confidence 0111224455553 36788899999999999864
No 70
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=8.6e-26 Score=212.98 Aligned_cols=239 Identities=17% Similarity=0.271 Sum_probs=174.6
Q ss_pred ceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCce
Q 014302 135 ACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQI 214 (427)
Q Consensus 135 ~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 214 (427)
......+|.+.|++++|+|++..+++++.|++|+||++. ++ .....+..| ...|
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~---------~~----------------~~~~~~~~h-~~~v 111 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNAL---------TS----------------QKTHAIKLH-CPWV 111 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETT---------TT----------------EEEEEEECC-CTTC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECC---------CC----------------ccceEEecC-CCCE
Confidence 344557899999999999999555555567999999987 11 334445555 7789
Q ss_pred eeeEeCCCCCCcccCc------------------------eEEeccCCeEEEEEccCC-CEEEEEecCCcEEEEEcCCCC
Q 014302 215 TALSWGPDGRFPGLGT------------------------PIRRGFGGLSILKWSPTG-DYFFAAKFDGTFYLWETNTWT 269 (427)
Q Consensus 215 ~~~~~spdg~~l~~~~------------------------~~~~~~~~v~~~~~sp~g-~~l~~~~~dg~v~iwd~~~~~ 269 (427)
.+++|+|+|++++++. .+..|.+.+.++.|+|++ ..|++++.|++|++||+++++
T Consensus 112 ~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~ 191 (380)
T 3iz6_a 112 MECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ 191 (380)
T ss_dssp CCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC
T ss_pred EEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc
Confidence 9999999999866442 234577889999999975 468899999999999999887
Q ss_pred cccc------ccCCCCeeEEEECC-CCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECC
Q 014302 270 SEPW------SSTSGFVTGATWDP-EGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDA 342 (427)
Q Consensus 270 ~~~~------~~~~~~v~~v~~sp-dg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp 342 (427)
.... ..|...|.+++|++ +++++++++ .++.+++|++......+ .....+.+.|.+++|+|
T Consensus 192 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs-~D~~v~~wd~~~~~~~~-----------~~~~~h~~~v~~v~~~p 259 (380)
T 3iz6_a 192 RISIFGSEFPSGHTADVLSLSINSLNANMFISGS-CDTTVRLWDLRITSRAV-----------RTYHGHEGDINSVKFFP 259 (380)
T ss_dssp EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE-TTSCEEEEETTTTCCCC-----------EEECCCSSCCCEEEECT
T ss_pred EEEEeecccCCCCccCeEEEEeecCCCCEEEEEE-CCCeEEEEECCCCCcce-----------EEECCcCCCeEEEEEec
Confidence 6322 36888999999987 778887764 55588888876421110 11112445899999999
Q ss_pred CCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 343 SGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 343 ~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+|++|++ ++.| |+|+|||++++..+..................+++|.|+ |.+|++|..+|.|.+|++.
T Consensus 260 ~~~~l~s---~s~D---~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 260 DGQRFGT---GSDD---GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS---GRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp TSSEEEE---ECSS---SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS---SSEEEEECTTSCEEEEETT
T ss_pred CCCeEEE---EcCC---CeEEEEECCCCcEEEEecccccccccccCceEEEEECCC---CCEEEEEECCCCEEEEECC
Confidence 9999999 6777 679999999887654321111000111122568999986 8899999999999999863
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=4.2e-24 Score=202.50 Aligned_cols=258 Identities=10% Similarity=0.120 Sum_probs=178.7
Q ss_pred ceeeeEEcC-CCCEEEEEeCCCeEEEEEccCCCCcceeec-----------cCCcCCeeEEEEccCCCceEEEe-cCCeE
Q 014302 101 DLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSGKDACILT-----------SDSQRDVKVLEWRPNGGRSLSVG-CKGGI 167 (427)
Q Consensus 101 ~V~~l~~sp-~g~~lat~~~d~~v~vwd~~~~~~~~~~~~-----------~~~~~~v~~l~~sp~~~~~la~g-~~~~i 167 (427)
.|++++|+| ++++||+|+.|+.|+||++........... ..|...|.+++|+|++..+|+++ .++.|
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i 124 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTL 124 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEE
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeE
Confidence 899999999 999999999999999999987732222111 24889999999999544555555 56999
Q ss_pred EEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc-
Q 014302 168 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP- 246 (427)
Q Consensus 168 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp- 246 (427)
++|++. .+ .....+ .+...+.++.|+|
T Consensus 125 ~iwd~~---------~~----------------~~~~~~---------------------------~~~~~~~~~~~~~~ 152 (408)
T 4a11_B 125 KVWDTN---------TL----------------QTADVF---------------------------NFEETVYSHHMSPV 152 (408)
T ss_dssp EEEETT---------TT----------------EEEEEE---------------------------ECSSCEEEEEECSS
T ss_pred EEeeCC---------CC----------------ccceec---------------------------cCCCceeeeEeecC
Confidence 999997 11 111111 1344567777776
Q ss_pred --CCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCc---cccccc
Q 014302 247 --TGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSL---DAHLLP 320 (427)
Q Consensus 247 --~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~---~~~~~~ 320 (427)
++.++++++.|+.|++||+++++.. .+..|...|.+++|+|++++++++++.++.+++|++......+ ..+...
T Consensus 153 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 232 (408)
T 4a11_B 153 STKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGK 232 (408)
T ss_dssp CSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTC
T ss_pred CCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccc
Confidence 4458999999999999999988764 3447899999999999999644445666689999887643211 111100
Q ss_pred cc-cccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEE------------------------
Q 014302 321 VD-LPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISL------------------------ 375 (427)
Q Consensus 321 ~~-~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~------------------------ 375 (427)
.. ........+...|.+++|+|++++|++ ++.| |.|++||+.++.....
T Consensus 233 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~---~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
T 4a11_B 233 KSQAVESANTAHNGKVNGLCFTSDGLHLLT---VGTD---NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSE 306 (408)
T ss_dssp SCCCTTTSSCSCSSCEEEEEECTTSSEEEE---EETT---SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSC
T ss_pred cceeeccccccccCceeEEEEcCCCCEEEE---ecCC---CeEEEEECCCCccceeccccccccccccceeEEecCCCce
Confidence 00 001111235568999999999999999 4455 5699999987543211
Q ss_pred ------------------eeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEeccc
Q 014302 376 ------------------SLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 376 ------------------~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
.+...+.+ ......+++|+|+ +.+|++|..||.|.+|++--
T Consensus 307 ~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~---~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 307 FVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCVFQSN---FQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEEEETT---TTEEEEEETTSCEEEEEECC
T ss_pred EEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEEEcCC---CCEEEEECCCCeEEEEeCCC
Confidence 01111112 2234668999986 77899999999999999743
No 72
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=9.5e-25 Score=209.33 Aligned_cols=253 Identities=16% Similarity=0.259 Sum_probs=177.6
Q ss_pred ceeeeEEcCC-CCEEEEEeCCCeEEEEEccCC--------CCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEE
Q 014302 101 DLQGVSWHQH-KHIVAFISGSTQVIVRDYEDS--------GKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIW 170 (427)
Q Consensus 101 ~V~~l~~sp~-g~~lat~~~d~~v~vwd~~~~--------~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw 170 (427)
.|++++|+|+ +.+||+++.||.|+||++... .........+|...|.+++|+|++..+|++|+ ++.|++|
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 209 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW 209 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEE
Confidence 7899999998 679999999999999999862 12344555679999999999999964666664 5999999
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc-CCC
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP-TGD 249 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp-~g~ 249 (427)
++..... ....+. ....+..|...|.+++|+| ++.
T Consensus 210 d~~~~~~---------------------~~~~~~-----------------------~~~~~~~h~~~v~~v~~~p~~~~ 245 (430)
T 2xyi_A 210 DINATPK---------------------EHRVID-----------------------AKNIFTGHTAVVEDVAWHLLHES 245 (430)
T ss_dssp ETTSCCB---------------------GGGEEE-----------------------CSEEECCCSSCEEEEEECSSCTT
T ss_pred eCCCCCC---------------------CCceec-----------------------cceeecCCCCCEeeeEEeCCCCC
Confidence 9971000 000000 0112335677899999999 667
Q ss_pred EEEEEecCCcEEEEEcCCCC---c-cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccccc
Q 014302 250 YFFAAKFDGTFYLWETNTWT---S-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPD 325 (427)
Q Consensus 250 ~l~~~~~dg~v~iwd~~~~~---~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 325 (427)
.|++++.|+.|++||+++.. . ..+..|...|.+++|+|++++++++++.++.+.+|++......+
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~----------- 314 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL----------- 314 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS-----------
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCe-----------
Confidence 88899999999999999874 2 23337889999999999998654455666689999887632110
Q ss_pred ceeeccCCceeEEEECCCCCE-EEEEEecCCCcceeEEEEEEeccCceEEE---------eeeeeeeCCCCCCCceeEEe
Q 014302 326 IVSLTGSQGIEKIAWDASGER-LAVSYKGGDDIYKGLIAIYDARRTPLISL---------SLIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 326 ~~~~~~~~~i~~v~~sp~g~~-La~~~~~~~d~~~g~i~vwd~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~f 395 (427)
.....+.+.|.+++|+|+++. |++ ++.| +.|+|||+........ ...... .+....+.+++|
T Consensus 315 ~~~~~h~~~v~~i~~sp~~~~~l~s---~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~ 386 (430)
T 2xyi_A 315 HSFESHKDEIFQVQWSPHNETILAS---SGTD---RRLHVWDLSKIGEEQSTEDAEDGPPELLFIH--GGHTAKISDFSW 386 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEE---EETT---SCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC--CCCSSCEEEEEE
T ss_pred EEeecCCCCEEEEEECCCCCCEEEE---EeCC---CcEEEEeCCCCccccCccccccCCcceEEEc--CCCCCCceEEEE
Confidence 111124458999999999964 666 4455 5699999987221100 000111 122233678999
Q ss_pred ccCCCCCc-eeEEEeeCceEEEEec
Q 014302 396 HDKFKQGP-LLSVCWSSGFCCTYPL 419 (427)
Q Consensus 396 ~~~~~~g~-~l~v~~~~g~i~~~~~ 419 (427)
+|+ +. +|+.+..+|.|++|.+
T Consensus 387 ~p~---~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 387 NPN---EPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp CSS---STTEEEEEETTSEEEEEEE
T ss_pred CCC---CCCEEEEEECCCCEEEeEc
Confidence 986 55 8888889999999986
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.8e-25 Score=204.57 Aligned_cols=236 Identities=17% Similarity=0.172 Sum_probs=171.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-----CeEEEEeccCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-----GGICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-----~~i~iw~~~~~ 175 (427)
.|++++|+|++++|++++.|+.|++||+... ...... .+...|.+++|+|++..+++++.+ +.+.+|++...
T Consensus 76 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSADYSIKLWDVSNG--QCVATW-KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTC--CEEEEE-ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cEEEEe-ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 7999999999999999999999999999877 333332 378899999999999656666666 89999999722
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhccc-CCCceeeeEeCCCCCCcccCc------------------eEEecc
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQ-NGEQITALSWGPDGRFPGLGT------------------PIRRGF 236 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~------------------~~~~~~ 236 (427)
......... .. .....+..+ ....+.+++|+|++++++.+. .+..|.
T Consensus 153 ~~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 218 (369)
T 3zwl_B 153 SATHELTKV-----------SE---EPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE 218 (369)
T ss_dssp TTTCCEEEE-----------CS---SCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS
T ss_pred ccceeeccc-----------cc---ceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC
Confidence 211111000 00 011111222 123889999999998755321 134477
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCc-------------eee
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSL-------------TLG 303 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~-------------~i~ 303 (427)
..+.+++|+|++++|++++.|+.|++||+++.+......+...+..++|+|+++++++++.++. .+.
T Consensus 219 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 298 (369)
T 3zwl_B 219 KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEAR 298 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEE
T ss_pred CceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeE
Confidence 8999999999999999999999999999999887666668889999999999999998876653 344
Q ss_pred eeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 304 SIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
+|++...... .....+.+.|.+++|+|++++|++ ++.| |.|++|+++.+.
T Consensus 299 ~~d~~~~~~~------------~~~~~~~~~v~~~~~s~~~~~l~s---~~~d---g~v~iw~~~~~~ 348 (369)
T 3zwl_B 299 FYHKIFEEEI------------GRVQGHFGPLNTVAISPQGTSYAS---GGED---GFIRLHHFEKSY 348 (369)
T ss_dssp EEETTTCCEE------------EEEECCSSCEEEEEECTTSSEEEE---EETT---SEEEEEEECHHH
T ss_pred EEecCCCcch------------hheecccCcEEEEEECCCCCEEEE---EcCC---CeEEEEECcccc
Confidence 4443332110 111224558999999999999999 5556 779999998754
No 74
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=9.6e-25 Score=207.33 Aligned_cols=228 Identities=16% Similarity=0.234 Sum_probs=172.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++|+.||.|+|||+... ........|...|.+++|+ +..+++++.++.|++|++...+
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---- 207 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--TKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN---- 207 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS----
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCC--eEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc----
Confidence 7999999999999999999999999999877 4555666899999999995 3245555566999999997111
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------------e---EEeccCCeEEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------------P---IRRGFGGLSILK 243 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------~---~~~~~~~v~~~~ 243 (427)
.....+..| ...|.+++|+|++++++.+. . +..|...|.+++
T Consensus 208 --------------------~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~ 266 (401)
T 4aez_A 208 --------------------HQIGTLQGH-SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVA 266 (401)
T ss_dssp --------------------CEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEE
T ss_pred --------------------ceeeEEcCC-CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEE
Confidence 123334455 78899999999998865432 1 234778899999
Q ss_pred EccCCCEEE-EEe--cCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEE-cCCceeeeeeeCCCCCCcccccc
Q 014302 244 WSPTGDYFF-AAK--FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAF-AGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 244 ~sp~g~~l~-~~~--~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
|+|++..++ +++ .|+.|++||+++++......+...+.+++|+|+++++++++ ..++.+.+|++.......
T Consensus 267 ~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~----- 341 (401)
T 4aez_A 267 WCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK----- 341 (401)
T ss_dssp ECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE-----
T ss_pred ECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee-----
Confidence 999886555 554 79999999999888766667788999999999999999864 356789999887641100
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
......+.+.|.+++|+|+|++|++ ++.| |.|++|++.+++.+
T Consensus 342 -----~~~~~~h~~~v~~~~~s~dg~~l~s---~~~d---g~i~iw~~~~~~~~ 384 (401)
T 4aez_A 342 -----QVDIPAHDTRVLYSALSPDGRILST---AASD---ENLKFWRVYDGDHV 384 (401)
T ss_dssp -----EEEEECCSSCCCEEEECTTSSEEEE---ECTT---SEEEEEECCC----
T ss_pred -----EEEecCCCCCEEEEEECCCCCEEEE---EeCC---CcEEEEECCCCccc
Confidence 0111224458999999999999999 5666 77999999887754
No 75
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=4.2e-24 Score=197.60 Aligned_cols=231 Identities=14% Similarity=0.147 Sum_probs=167.5
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++++.|+.|++|+.... ........+...+..+.+++++..+++++.++.+++|++..
T Consensus 88 ~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~------ 159 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG------ 159 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS------
T ss_pred CEEEEEECCCCCEEEEEcccccceEEeeccc--ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCC------
Confidence 7999999999999999999999999998877 44445556777889999999996555556679999999861
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCC--ccc--------------Cc---eEEeccCCeEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRF--PGL--------------GT---PIRRGFGGLSI 241 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~--l~~--------------~~---~~~~~~~~v~~ 241 (427)
..........+ ...+..++|++++.. +++ +. .+..|...|.+
T Consensus 160 ------------------~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~ 220 (340)
T 4aow_A 160 ------------------VCKYTVQDESH-SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 220 (340)
T ss_dssp ------------------CEEEEECSSSC-SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred ------------------CceEEEEeccc-cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEE
Confidence 01112223333 667788888876543 111 11 13347789999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Ccccccc
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHLL 319 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~~ 319 (427)
++|+|++++|++++.|+.|++||+++.+......+...+.+++|+|++.+++. +. ++.+++|++..... .+..+..
T Consensus 221 ~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~-d~~i~iwd~~~~~~~~~~~~~~~ 298 (340)
T 4aow_A 221 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCA-AT-GPSIKIWDLEGKIIVDELKQEVI 298 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEE-EE-TTEEEEEETTTTEEEEEECCC--
T ss_pred EEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeec-cC-CCEEEEEECCCCeEEEeccccce
Confidence 99999999999999999999999998887666667788999999999877654 34 45788887765411 1111100
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
......+...|++++|+|||++||+ ++.| |+|+|||+++|.
T Consensus 299 -----~~~~~~h~~~v~~l~~s~dg~~l~s---gs~D---g~v~iW~~~tGt 339 (340)
T 4aow_A 299 -----STSSKAEPPQCTSLAWSADGQTLFA---GYTD---NLVRVWQVTIGT 339 (340)
T ss_dssp ----------CCCCCEEEEEECTTSSEEEE---EETT---SCEEEEEEEC--
T ss_pred -----eeeccCCCCCEEEEEECCCCCEEEE---EeCC---CEEEEEeCCCcC
Confidence 0111234558999999999999998 5666 679999998864
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=8.5e-25 Score=204.88 Aligned_cols=241 Identities=14% Similarity=0.182 Sum_probs=173.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++|++++.|+.|++||+.............|...|.+++|+|++..+++++.++.+++|+++..
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~----- 128 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE----- 128 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETT-----
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCC-----
Confidence 799999999999999999999999999987632233344678899999999999954444455699999999711
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc------------------------------
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT------------------------------ 230 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~------------------------------ 230 (427)
..+.....+...+...|.+++|+|++++++.+.
T Consensus 129 -----------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (372)
T 1k8k_C 129 -----------------NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF 191 (372)
T ss_dssp -----------------TTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCT
T ss_pred -----------------CcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccch
Confidence 111222223233378899999999988754321
Q ss_pred --e---EEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeee
Q 014302 231 --P---IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGS 304 (427)
Q Consensus 231 --~---~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~ 304 (427)
. +..|...+.+++|+|++++|++++.|+.|++||+++++.. .+..|...+.+++|+|++++++++ .++.+.+
T Consensus 192 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~i 269 (372)
T 1k8k_C 192 GELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG--HDCFPVL 269 (372)
T ss_dssp TCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE--TTSSCEE
T ss_pred hhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE--eCCeEEE
Confidence 1 1235678999999999999999999999999999988764 444788899999999999988765 5558888
Q ss_pred eeeCC--CC----CCcccccc---------------cccccc-------cee-eccCCceeEEEEC-CCC---CEEEEEE
Q 014302 305 IHFAS--KP----PSLDAHLL---------------PVDLPD-------IVS-LTGSQGIEKIAWD-ASG---ERLAVSY 351 (427)
Q Consensus 305 ~~~~~--~~----~~~~~~~~---------------~~~~~~-------~~~-~~~~~~i~~v~~s-p~g---~~La~~~ 351 (427)
|++.. .. ..+..+.. ...... ... ..+.+.|++++|. ++| ++|++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s-- 347 (372)
T 1k8k_C 270 FTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCT-- 347 (372)
T ss_dssp EEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEE--
T ss_pred EEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEE--
Confidence 88876 21 00000000 000000 111 1456689999976 777 99998
Q ss_pred ecCCCcceeEEEEEEeccCc
Q 014302 352 KGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 352 ~~~~d~~~g~i~vwd~~~~~ 371 (427)
++.| |+|++|++++++
T Consensus 348 -~~~D---g~i~~W~~~~~~ 363 (372)
T 1k8k_C 348 -TGMD---GGMSIWDVRSLE 363 (372)
T ss_dssp -EETT---SEEEEEEHHHHH
T ss_pred -ecCC---CceEEEEecChh
Confidence 5666 779999997754
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=2.6e-24 Score=195.77 Aligned_cols=219 Identities=16% Similarity=0.243 Sum_probs=147.5
Q ss_pred ceeeeEEcCC--CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEecCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~--g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g~~~~i~iw~~~~~~ 176 (427)
.|++++|+|+ +++||+|+.|++|+|||+..+..........|...|.+++|+|+ +..+++++.++.|++|++...+
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 7999999864 88999999999999999987633344445678999999999998 6334444456999999997110
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF 256 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 256 (427)
. .....+..| ...|.+++|+|++.... . .....+++++|++++.
T Consensus 135 ~-----------------------~~~~~~~~h-~~~v~~~~~~p~~~~~~-----~-------~~~~~~~~~~l~sgs~ 178 (297)
T 2pm7_B 135 T-----------------------TSPIIIDAH-AIGVNSASWAPATIEED-----G-------EHNGTKESRKFVTGGA 178 (297)
T ss_dssp C-----------------------BCCEEEECC-SSCEEEEEECCCC------------------------CCEEEEEET
T ss_pred c-----------------------eeeeeeecc-cCccceEeecCCccccc-----c-------cCCCCCCcceEEEEcC
Confidence 0 001112333 45566666666532110 0 0001234689999999
Q ss_pred CCcEEEEEcCCCCc-----cccccCCCCeeEEEECCCC---CEEEEEEcCCceeeeeeeCCCCCCcccccccccccccee
Q 014302 257 DGTFYLWETNTWTS-----EPWSSTSGFVTGATWDPEG---RMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVS 328 (427)
Q Consensus 257 dg~v~iwd~~~~~~-----~~~~~~~~~v~~v~~spdg---~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
|+.|++||+++.+. ..+..|...|.+++|+|++ ++|+++ +.++.+++|++............ ..
T Consensus 179 D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~-s~D~~v~iWd~~~~~~~~~~~~~-------~~ 250 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV-SQDRTCIIWTQDNEQGPWKKTLL-------KE 250 (297)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE-ETTSCEEEEEESSTTSCCEEEES-------SS
T ss_pred CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE-ECCCcEEEEEeCCCCCccceeee-------ec
Confidence 99999999987652 2344799999999999995 677765 55568899988663211100000 00
Q ss_pred eccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 329 LTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 329 ~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
..+...|.+++|+|+|++||+ ++.| ++|+||+...
T Consensus 251 ~~~~~~v~~~~~s~~g~~las---~~~D---~~v~lw~~~~ 285 (297)
T 2pm7_B 251 EKFPDVLWRASWSLSGNVLAL---SGGD---NKVTLWKENL 285 (297)
T ss_dssp SCCSSCEEEEEECSSSCCEEE---EETT---SCEEEEEECT
T ss_pred ccCCCcEEEEEECCCCCEEEE---EcCC---CcEEEEEECC
Confidence 123457999999999999999 5555 6699999863
No 78
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=3.8e-24 Score=195.93 Aligned_cols=235 Identities=13% Similarity=0.200 Sum_probs=171.8
Q ss_pred ceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCce
Q 014302 135 ACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQI 214 (427)
Q Consensus 135 ~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 214 (427)
......+|...|++++|+|++..+++++.++.+++|++. .+ .....+..| ...|
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~---------~~----------------~~~~~~~~h-~~~v 68 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---------DG----------------KFEKTISGH-KLGI 68 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT---------TC----------------CEEEEECCC-SSCE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCC---------Cc----------------ccchhhccC-CCce
Confidence 344556899999999999999544455567999999986 11 233345555 7789
Q ss_pred eeeEeCCCCCCcccCc-----------------eEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccC
Q 014302 215 TALSWGPDGRFPGLGT-----------------PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSST 276 (427)
Q Consensus 215 ~~~~~spdg~~l~~~~-----------------~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~ 276 (427)
.+++|+|++++++++. .+..|...|.+++|+|++++|++++.|+.|++||+++++.. .+..|
T Consensus 69 ~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 148 (312)
T 4ery_A 69 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH 148 (312)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC
Confidence 9999999999865431 24457788999999999999999999999999999988764 44478
Q ss_pred CCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC
Q 014302 277 SGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD 356 (427)
Q Consensus 277 ~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d 356 (427)
...|.+++|+|++++|++++. ++.+++|++....... .....+...+..++|+|++++|++ ++.|
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~---~~~d 213 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLK-----------TLIDDDNPPVSFVKFSPNGKYILA---ATLD 213 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEET-TSCEEEEETTTCCEEE-----------EECCSSCCCEEEEEECTTSSEEEE---EETT
T ss_pred CCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCceee-----------EEeccCCCceEEEEECCCCCEEEE---EcCC
Confidence 899999999999999987755 4488888876542100 000112347899999999999998 4555
Q ss_pred cceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 357 IYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 357 ~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+.|++||++++..+.. +.+.......+...|.+. .+.+|++|..||.|.+|++.
T Consensus 214 ---~~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 214 ---NTLKLWDYSKGKCLKT-----YTGHKNEKYCIFANFSVT--GGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp ---TEEEEEETTTTEEEEE-----ECSSCCSSSCCCEEEECS--SSCEEEECCTTSCEEEEETT
T ss_pred ---CeEEEEECCCCcEEEE-----EEecCCceEEEEEEEEeC--CCcEEEEECCCCEEEEEECC
Confidence 6799999998776522 222222222233444432 47789999999999999963
No 79
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.4e-25 Score=214.84 Aligned_cols=250 Identities=7% Similarity=-0.018 Sum_probs=170.0
Q ss_pred CceeeeEEcCCC---------CEEEEE-------------------eCCCeEEEEEccCCCCcc--eeeccCCcCCeeEE
Q 014302 100 VDLQGVSWHQHK---------HIVAFI-------------------SGSTQVIVRDYEDSGKDA--CILTSDSQRDVKVL 149 (427)
Q Consensus 100 ~~V~~l~~sp~g---------~~lat~-------------------~~d~~v~vwd~~~~~~~~--~~~~~~~~~~v~~l 149 (427)
..|.+|+|+|++ ++||+| +.|++|+||+++...... ......|.+.|.++
T Consensus 134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v 213 (524)
T 2j04_B 134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDL 213 (524)
T ss_dssp C--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEE
T ss_pred CceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEE
Confidence 389999999987 677774 467899999998762211 12234567889999
Q ss_pred EEccCC-----CceEEEe-cCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCC
Q 014302 150 EWRPNG-----GRSLSVG-CKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG 223 (427)
Q Consensus 150 ~~sp~~-----~~~la~g-~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 223 (427)
+|+|++ ..+||++ .|++|+||++...... . . .... + .
T Consensus 214 ~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~------------------~-~-~~~~-~----~------------ 256 (524)
T 2j04_B 214 KWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD------------------V-H-VFKM-C----E------------ 256 (524)
T ss_dssp EECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS------------------S-S-EEEC-C----C------------
T ss_pred EECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc------------------c-c-ccee-e----c------------
Confidence 999972 2467665 5699999999711000 0 0 0000 0 0
Q ss_pred CCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc--ccccCCCCeeEE--EECCCC-CEEEEEEcC
Q 014302 224 RFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE--PWSSTSGFVTGA--TWDPEG-RMILLAFAG 298 (427)
Q Consensus 224 ~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~--~~~~~~~~v~~v--~~spdg-~~l~~~~~~ 298 (427)
.....+..|...|++++|++++ .|++|+.||+|++||+++.... .+..|...|.++ +|+|+| ++|++++ .
T Consensus 257 ---~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S-~ 331 (524)
T 2j04_B 257 ---KPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA-V 331 (524)
T ss_dssp ---SCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE-T
T ss_pred ---CceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec-c
Confidence 0011344577889999999864 8999999999999999876542 345899999999 678888 7777764 5
Q ss_pred CceeeeeeeCCCCC--CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEe
Q 014302 299 SLTLGSIHFASKPP--SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLS 376 (427)
Q Consensus 299 ~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~ 376 (427)
++++++|++.+... .+.+|.. ...|.+++|+|+++.||+ ++.| ++|++||++++.++..
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~------------~~~v~~v~fsp~~~~l~s---~~~d---~tv~lwd~~~~~~~~~- 392 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFR------------GSNLVPVVYCPQIYSYIY---SDGA---SSLRAVPSRAAFAVHP- 392 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECS------------CCSCCCEEEETTTTEEEE---ECSS---SEEEEEETTCTTCCEE-
T ss_pred CCeEEEEECCCCCcccccccccc------------cCcccceEeCCCcCeEEE---eCCC---CcEEEEECccccccee-
Confidence 55888888765311 1111211 125789999999999988 5555 6799999998775321
Q ss_pred eeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 377 LIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
+.+.. ..+.+++|.|+ |..|+.|..||.|.+|++
T Consensus 393 ----l~gH~--~~V~sva~Sp~---g~~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 393 ----LVSRE--TTITAIGVSRL---HPMVLAGSADGSLIITNA 426 (524)
T ss_dssp ----EEECS--SCEEEEECCSS---CCBCEEEETTTEEECCBS
T ss_pred ----eecCC--CceEEEEeCCC---CCeEEEEECCCEEEEEec
Confidence 22222 23678999986 778999999999999985
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=9.6e-25 Score=203.23 Aligned_cols=243 Identities=11% Similarity=0.159 Sum_probs=169.2
Q ss_pred ceeeeEEcCC---CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEE------ccCCCceEEEecCCeEEEEe
Q 014302 101 DLQGVSWHQH---KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEW------RPNGGRSLSVGCKGGICIWA 171 (427)
Q Consensus 101 ~V~~l~~sp~---g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~------sp~~~~~la~g~~~~i~iw~ 171 (427)
.|++++|+|+ +++|++++.|+.|++||+..... ......+|...|.+++| +|++..+++++.++.|++|+
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM-PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS-CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc-cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 7999999999 69999999999999999987731 44555689999999955 67885555555669999999
Q ss_pred ccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeE----eCCCCCCcccCc----------------e
Q 014302 172 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALS----WGPDGRFPGLGT----------------P 231 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~spdg~~l~~~~----------------~ 231 (427)
+..... ..........+....+.+++ |+|+++++..+. .
T Consensus 146 ~~~~~~---------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 204 (357)
T 3i2n_A 146 PRQKDD---------------------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW 204 (357)
T ss_dssp TTSCSS---------------------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCCCC---------------------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee
Confidence 972110 11112212222344677777 788888765331 1
Q ss_pred EEeccCCeEEEEEcc---CCCEEEEEecCCcEEEEEcCCCCccc-cc-----cCCCCeeEEEECCCCC-EEEEEEcCCce
Q 014302 232 IRRGFGGLSILKWSP---TGDYFFAAKFDGTFYLWETNTWTSEP-WS-----STSGFVTGATWDPEGR-MILLAFAGSLT 301 (427)
Q Consensus 232 ~~~~~~~v~~~~~sp---~g~~l~~~~~dg~v~iwd~~~~~~~~-~~-----~~~~~v~~v~~spdg~-~l~~~~~~~~~ 301 (427)
...|...+.+++|+| ++.+|++++.||.|++||+++.+... +. .|...|.+++|+|+++ ++++ ++.++.
T Consensus 205 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~ 283 (357)
T 3i2n_A 205 ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLT-AGGAGG 283 (357)
T ss_dssp EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEE-EETTSE
T ss_pred ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEE-EeCCCc
Confidence 234678999999999 99999999999999999998876532 22 7899999999999999 5555 456669
Q ss_pred eeeeeeCCCCCCc----ccccccc--ccccce-eeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 302 LGSIHFASKPPSL----DAHLLPV--DLPDIV-SLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 302 i~~~~~~~~~~~~----~~~~~~~--~~~~~~-~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
+++|++....... .+..... ...... ...+.+.|.+++|+|+|++|+++ ++.| +.|+|||+.+..
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s--~~~d---~~i~iw~~~~~~ 355 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC--SSFD---QTVRVLIVTKLN 355 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE--EETT---SEEEEEEECC--
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE--ecCC---CcEEEEECCCcc
Confidence 9999887642210 0100000 001111 22355689999999999999843 5556 779999998654
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=4.4e-25 Score=206.13 Aligned_cols=222 Identities=12% Similarity=0.174 Sum_probs=167.3
Q ss_pred CceeeeEEcCC----CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEcc-CCCceEEEe-cCCeEEEEecc
Q 014302 100 VDLQGVSWHQH----KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRP-NGGRSLSVG-CKGGICIWAPS 173 (427)
Q Consensus 100 ~~V~~l~~sp~----g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~la~g-~~~~i~iw~~~ 173 (427)
..|++++|+|+ +++|++|+.|+.|+|||+... ........|...|.+++|+| ++ .+|+++ .++.|++|++.
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--QCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--CEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--eEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEee
Confidence 37999999999 679999999999999999876 45555667999999999999 66 555555 56999999997
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehh---cccCCCceeeeEeCCCCCCcccCce-----------------EE
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFL---RSQNGEQITALSWGPDGRFPGLGTP-----------------IR 233 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~spdg~~l~~~~~-----------------~~ 233 (427)
.+ .....+ ..+ ...|.+++|+|+++++.++.. +.
T Consensus 147 ---------~~----------------~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 147 ---------TD----------------TLVAIFGGVEGH-RDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp ---------TT----------------EEEEEECSTTSC-SSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred ---------cC----------------eEEEEecccccc-cCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccc
Confidence 11 223323 344 788999999999987553311 01
Q ss_pred ----------------------------eccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc---------------
Q 014302 234 ----------------------------RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS--------------- 270 (427)
Q Consensus 234 ----------------------------~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~--------------- 270 (427)
.|...|.+++|+ +++|++++.|+.|++||+++...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 278 (366)
T 3k26_A 201 ESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTIL 278 (366)
T ss_dssp HHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEE
T ss_pred eeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchhee
Confidence 177889999998 77999999999999999987654
Q ss_pred cccccCCCCeeEEEECCC--CCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeec-c--CCceeEEEECCCCC
Q 014302 271 EPWSSTSGFVTGATWDPE--GRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT-G--SQGIEKIAWDASGE 345 (427)
Q Consensus 271 ~~~~~~~~~v~~v~~spd--g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~i~~v~~sp~g~ 345 (427)
..+..|...|.+++|+|+ +++|++++ .++.+++|++........ ....+. + ...|.+++|+|+++
T Consensus 279 ~~~~~~~~~v~~~~~s~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~---------~~~~~~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 279 GRFDYSQCDIWYMRFSMDFWQKMLALGN-QVGKLYVWDLEVEDPHKA---------KCTTLTHHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp EEEECSSCCSSCCCCEECTTSSEEEEEC-TTSCEEEEECCSSSGGGC---------EEEEECCTTCCSCEEEEEECTTSS
T ss_pred ccccccCCcEEEEEEcCCCCCcEEEEEe-cCCcEEEEECCCCCCccc---------cceEEcccccCCceEEEEeCCCCC
Confidence 112267788999999999 99999774 555888888876421000 001111 1 45899999999999
Q ss_pred EEEEEEecCCCcceeEEEEEEec
Q 014302 346 RLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 346 ~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
+|++ ++.| |.|++||+.
T Consensus 349 ~l~s---~~~d---g~i~iwd~~ 365 (366)
T 3k26_A 349 ILIA---VCDD---ASIWRWDRL 365 (366)
T ss_dssp EEEE---EETT---SEEEEEEC-
T ss_pred eEEE---EeCC---CEEEEEEec
Confidence 9999 5566 779999985
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=2.8e-24 Score=200.68 Aligned_cols=279 Identities=13% Similarity=0.138 Sum_probs=156.6
Q ss_pred CCCCC--ceeeeEEcCC---CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEE
Q 014302 96 LLPEV--DLQGVSWHQH---KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIW 170 (427)
Q Consensus 96 ~l~~~--~V~~l~~sp~---g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw 170 (427)
.+.+| .|++++|+|+ |++|++|+.|+.|+||++.............|...|++++|+|++..+++++.++.|++|
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw 113 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW 113 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence 33444 8999999999 599999999999999999874333335566799999999999999555555567999999
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEe--CCCCCCcccCc--------------eEEe
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSW--GPDGRFPGLGT--------------PIRR 234 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--spdg~~l~~~~--------------~~~~ 234 (427)
++. .+ .... +..+ ...|.+++| +|+++++.++. .+..
T Consensus 114 d~~---------~~----------------~~~~-~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 114 DLS---------SN----------------QAIQ-IAQH-DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp ETT---------TT----------------EEEE-EEEC-SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred EcC---------CC----------------Ccee-eccc-cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 997 11 1111 1112 334444444 44443322111 0000
Q ss_pred ccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcccc---ccCCCCeeEEEECCCCCE----EEEEEcCCceeeeeee
Q 014302 235 GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW---SSTSGFVTGATWDPEGRM----ILLAFAGSLTLGSIHF 307 (427)
Q Consensus 235 ~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~---~~~~~~v~~v~~spdg~~----l~~~~~~~~~i~~~~~ 307 (427)
....-..+++.+.+..+++++.++.+++||++....... ..+...+..+++.++... ++++ +.++.+.+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dg~i~i~~~ 245 (368)
T 3mmy_A 167 LQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG-SIEGRVAIHYI 245 (368)
T ss_dssp EECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE-ETTSEEEEEES
T ss_pred EecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEe-cCCCcEEEEec
Confidence 111112222333334444444444444444433322100 012223333333333322 4444 34446666666
Q ss_pred CCCCC-----CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeee
Q 014302 308 ASKPP-----SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIR 382 (427)
Q Consensus 308 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~ 382 (427)
..... .+.+|.... .......+...|.+++|+|++++|++ ++.| |.|++||++++.++... .
T Consensus 246 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~s---~~~d---g~i~iwd~~~~~~~~~~-----~ 312 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNG--TNTSAPQDIYAVNGIAFHPVHGTLAT---VGSD---GRFSFWDKDARTKLKTS-----E 312 (368)
T ss_dssp SCSCHHHHSEEEECSEEC------CCCEEECCEEEEEECTTTCCEEE---EETT---SCEEEEETTTTEEEEEC-----C
T ss_pred CCCCccccceeeeeeeccc--ccccccccccceEEEEEecCCCEEEE---EccC---CeEEEEECCCCcEEEEe-----c
Confidence 54311 111111100 00000111226999999999999999 5555 66999999988765321 2
Q ss_pred CCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 383 GPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 383 ~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+. .....+++|.|+ |..|++|..+|....+.++
T Consensus 313 ~~--~~~v~~~~~s~~---g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 313 QL--DQPISACCFNHN---GNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp CC--SSCEEEEEECTT---SSCEEEEECCCSTTCGGGC
T ss_pred CC--CCCceEEEECCC---CCeEEEEeccccccccccc
Confidence 22 223668999986 7789999898876666644
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=1.3e-24 Score=207.67 Aligned_cols=221 Identities=16% Similarity=0.288 Sum_probs=170.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~ 179 (427)
.|++|+|+|+|++||+|+.|++|+|||+... .......+|...+.+++|+ + .+|++| .++.+++|+....
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--~~~~~~~~h~~~v~~~s~~--~-~~l~sgs~d~~i~~~d~~~~---- 219 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRLRNMTSHSARVGSLSWN--S-YILSSGSRSGHIHHHDVRVA---- 219 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEETTSS----
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCC--cEEEEEeCCCCceEEEeeC--C-CEEEEEeCCCceeEeeeccc----
Confidence 6999999999999999999999999999887 5666677899999998886 4 456555 5599999998611
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc---------------------eEEeccCC
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT---------------------PIRRGFGG 238 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~---------------------~~~~~~~~ 238 (427)
...+..+..| ...+..+.|+|+|++++.+. ....|...
T Consensus 220 --------------------~~~~~~~~~h-~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~ 278 (420)
T 4gga_A 220 --------------------EHHVATLSGH-SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 278 (420)
T ss_dssp --------------------SCEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC
T ss_pred --------------------ceeeEEeccc-ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCc
Confidence 1223345555 77888999999988754321 12346688
Q ss_pred eEEEEEccCCCEEE-E--EecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEc-CCceeeeeeeCCCCC--
Q 014302 239 LSILKWSPTGDYFF-A--AKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA-GSLTLGSIHFASKPP-- 312 (427)
Q Consensus 239 v~~~~~sp~g~~l~-~--~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~-~~~~i~~~~~~~~~~-- 312 (427)
|.+++|+|++..++ + |+.|++|++||+.+++......+...+.++.|+|+++.+++++. .++.|++|++.+...
T Consensus 279 V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 279 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA 358 (420)
T ss_dssp EEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred eeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEE
Confidence 99999999876544 3 45799999999999988666667778999999999999988754 567888888876421
Q ss_pred CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 313 SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
.+.+ |.+.|.+|+|+|||++||+ ++.| ++|+|||+....
T Consensus 359 ~l~g--------------H~~~V~~l~~spdg~~l~S---~s~D---~tvriWdv~~~~ 397 (420)
T 4gga_A 359 ELKG--------------HTSRVLSLTMSPDGATVAS---AAAD---ETLRLWRCFELD 397 (420)
T ss_dssp EECC--------------CSSCEEEEEECTTSSCEEE---EETT---TEEEEECCSCSS
T ss_pred EEcC--------------CCCCEEEEEEcCCCCEEEE---EecC---CeEEEEECCCCC
Confidence 2222 3458999999999999999 5666 779999996543
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=1.1e-24 Score=235.64 Aligned_cols=269 Identities=12% Similarity=0.167 Sum_probs=201.3
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
..|.+++|+|+++++++|+.||.|++|++... .......+|...|++++|+|++..+++++.++.|++|++.
T Consensus 962 ~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~------ 1033 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN--RVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ------ 1033 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCEEEETTTT--SCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT------
T ss_pred CcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC--ceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC------
Confidence 37999999999999999999999999999877 4555667899999999999999655555667999999997
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCccc-------------C---ceEEeccCCeEEEE
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGL-------------G---TPIRRGFGGLSILK 243 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~-------------~---~~~~~~~~~v~~~~ 243 (427)
++ ... .+..+ ...+.+++|+|++.++.. + ..+..|...|.+++
T Consensus 1034 ---~~----------------~~~-~~~~~-~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~ 1092 (1249)
T 3sfz_A 1034 ---TG----------------DYV-FLQAH-QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCA 1092 (1249)
T ss_dssp ---TT----------------EEE-CCBCC-SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEE
T ss_pred ---CC----------------ceE-EEecC-CCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEE
Confidence 11 112 12333 678889999998766321 1 12455788999999
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccc
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVD 322 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 322 (427)
|+|++++|++++.|+.|++||+.+++.. .+..|...|.+++|+|+|++|++++. ++.+++|++.+...... ..+..
T Consensus 1093 ~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~-dg~i~vwd~~~~~~~~~--~~~~~ 1169 (1249)
T 3sfz_A 1093 ISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDD-NGEIRIWNVSDGQLLHS--CAPIS 1169 (1249)
T ss_dssp ECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEET-TSCCCEEESSSSCCCCC--CCCCC
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeC-CCEEEEEECCCCceEEE--ecccc
Confidence 9999999999999999999999988774 44589999999999999999998754 45888998876422110 00000
Q ss_pred cccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCC
Q 014302 323 LPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQG 402 (427)
Q Consensus 323 ~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g 402 (427)
.. .....+.+.|++++|+|||++|+++ + |.|++||+.++..+.. +.+.. ....+++|.|+ |
T Consensus 1170 ~~-~~~~~~~~~v~~l~fs~dg~~l~s~--~------g~v~vwd~~~g~~~~~-----~~~~~--~~i~~~~~s~d---g 1230 (1249)
T 3sfz_A 1170 VE-EGTATHGGWVTDVCFSPDSKTLVSA--G------GYLKWWNVATGDSSQT-----FYTNG--TNLKKIHVSPD---F 1230 (1249)
T ss_dssp --------CCSCCCEEEECTTSSCEEEE--S------SSEEEBCSSSCBCCCC-----CCCSS--CCCCCCEECSS---S
T ss_pred cc-ccccccCceEEEEEECCCCCEEEEC--C------CeEEEEECCCCceeee-----eeccC--CcccEEEECCC---C
Confidence 00 0112345589999999999999884 3 3499999998876421 11222 22457888886 6
Q ss_pred ceeEEEeeCceEEEEec
Q 014302 403 PLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 403 ~~l~v~~~~g~i~~~~~ 419 (427)
..|+++..+|.|.+|++
T Consensus 1231 ~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1231 RTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp CCEEEECTTCCEEEECC
T ss_pred CEEEEecCCcEEEEEee
Confidence 78899999999999986
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=5.4e-25 Score=206.98 Aligned_cols=184 Identities=14% Similarity=0.191 Sum_probs=136.1
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCC-CcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSG-KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
.|++++|+|++++|++++.|++|+|||+.... .........|...|.+++|+|++..+++++.++.|++|+++.
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~----- 131 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQ----- 131 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-------
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECC-----
Confidence 79999999999999999999999999998873 234555667999999999999996566666679999999971
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce------EE--------------------
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP------IR-------------------- 233 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~------~~-------------------- 233 (427)
+ ..+.....+...+...|.+++|+|++++++.+.. +.
T Consensus 132 ----~-------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 194 (377)
T 3dwl_C 132 ----E-------------NDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLP 194 (377)
T ss_dssp --------------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCC
T ss_pred ----c-------------ccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccc
Confidence 1 0112234455523889999999999987553311 00
Q ss_pred --------eccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc-----cccccCCCCeeEEEECCCCCEEEEEEcCCc
Q 014302 234 --------RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-----EPWSSTSGFVTGATWDPEGRMILLAFAGSL 300 (427)
Q Consensus 234 --------~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~-----~~~~~~~~~v~~v~~spdg~~l~~~~~~~~ 300 (427)
.|...|.+++|+|++++|++++.|+.|++||+++++. ..+..|...|.+++|+|+|++|+++ .+++
T Consensus 195 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~ 273 (377)
T 3dwl_C 195 FNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAG-YNYS 273 (377)
T ss_dssp EEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEE-SSSS
T ss_pred hhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEE-cCCc
Confidence 4667799999999999999999999999999998876 2344888999999999999998876 4443
Q ss_pred eeeeeeeC
Q 014302 301 TLGSIHFA 308 (427)
Q Consensus 301 ~i~~~~~~ 308 (427)
.+ +|...
T Consensus 274 ~~-~~~~~ 280 (377)
T 3dwl_C 274 PI-LLQGN 280 (377)
T ss_dssp EE-EECCC
T ss_pred EE-EEEeC
Confidence 33 45443
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=8.7e-24 Score=204.52 Aligned_cols=253 Identities=13% Similarity=0.140 Sum_probs=182.7
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcccc
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASV 181 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~ 181 (427)
+.++++ ++++|++|+.|++|++||+... .......+|...|.+++|+|++ .+++++.++.|++|++.
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~-------- 191 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK-------- 191 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT--------
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCCC--cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC--------
Confidence 566666 5679999999999999999877 5556667899999999999998 66666677999999997
Q ss_pred ccCcccccccccCCCCcceeEeehhcccCCCceeeeEeC--CCCCCcccCc-----------------------------
Q 014302 182 RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWG--PDGRFPGLGT----------------------------- 230 (427)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--pdg~~l~~~~----------------------------- 230 (427)
++ .....+..| ...|.+++|+ +++.++.++.
T Consensus 192 -~~----------------~~~~~~~~h-~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 192 -KG----------------CCTHVFEGH-NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp -TT----------------EEEEEECCC-SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred -CC----------------cEEEEECCC-CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 11 334445555 7778888887 4555433221
Q ss_pred -----------eEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcC
Q 014302 231 -----------PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAG 298 (427)
Q Consensus 231 -----------~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~ 298 (427)
.+..|...+.++ ++++++|++++.|+.|++||+++.+.. .+..|...|.+++|+|+++++++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~- 330 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM- 330 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET-
T ss_pred eccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC-
Confidence 122344455544 788999999999999999999988764 34478999999999999999998754
Q ss_pred CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeee
Q 014302 299 SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLI 378 (427)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~ 378 (427)
++.+++|++.+.... .....+...|.+++|+ +++|++ ++.| |+|++||+.+.......
T Consensus 331 dg~i~vwd~~~~~~~------------~~~~~h~~~v~~~~~~--~~~l~s---~s~d---g~v~vwd~~~~~~~~~~-- 388 (464)
T 3v7d_B 331 DTTIRIWDLENGELM------------YTLQGHTALVGLLRLS--DKFLVS---AAAD---GSIRGWDANDYSRKFSY-- 388 (464)
T ss_dssp TSCEEEEETTTTEEE------------EEECCCSSCEEEEEEC--SSEEEE---EETT---SEEEEEETTTCCEEEEE--
T ss_pred CCcEEEEECCCCcEE------------EEEeCCCCcEEEEEEc--CCEEEE---EeCC---CcEEEEECCCCceeeee--
Confidence 458888887654210 0111234588999998 578888 5556 77999999886643221
Q ss_pred eeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 379 GFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 379 ~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
..... ...++|.++ +.+|++|. +|.|.+|++-
T Consensus 389 ----~~~~~--~~~~~~~~~---~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 389 ----HHTNL--SAITTFYVS---DNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp ----ECTTC--CCEEEEEEC---SSEEEEEE-TTEEEEEETT
T ss_pred ----cCCCC--ccEEEEEeC---CCEEEEec-CCeEEEEECC
Confidence 11112 335677775 66888885 9999999963
No 87
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=9e-24 Score=200.62 Aligned_cols=250 Identities=14% Similarity=0.197 Sum_probs=177.1
Q ss_pred ceeeeEEcCCCCE-EEEEeCCCeEEEEEccCCCC--cceeeccCCcCCeeEEEEcc-CCCceEEEe-cCCeEEEEeccCC
Q 014302 101 DLQGVSWHQHKHI-VAFISGSTQVIVRDYEDSGK--DACILTSDSQRDVKVLEWRP-NGGRSLSVG-CKGGICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp~g~~-lat~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~v~~l~~sp-~~~~~la~g-~~~~i~iw~~~~~ 175 (427)
....++++|+... +++++.||.|+||++...+. .......+|...|++++|+| ++ .+|+++ .++.|++|++...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCC
Confidence 4567889998874 44678899999999976522 23334567999999999999 66 566666 4699999999711
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCC-CEEEEE
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTG-DYFFAA 254 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g-~~l~~~ 254 (427)
+. .... . ..-..+..|...|.+++|+|++ ++|+++
T Consensus 115 ~~-------------------------~~~~----~---------------~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 115 GL-------------------------VLPL----R---------------EPVITLEGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp CC-------------------------SSCB----C---------------SCSEEEECCSSCEEEEEECSSBTTEEEEE
T ss_pred CC-------------------------cccc----C---------------CceEEecCCCCeEEEEEECcCCCCEEEEE
Confidence 00 0000 0 0112355678899999999998 689999
Q ss_pred ecCCcEEEEEcCCCCcc-cc--ccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccccccee-ec
Q 014302 255 KFDGTFYLWETNTWTSE-PW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVS-LT 330 (427)
Q Consensus 255 ~~dg~v~iwd~~~~~~~-~~--~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 330 (427)
+.|+.|++||+++++.. .+ ..|...|.+++|+|+|++|++++. ++.+++|++...... ... ..
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~------------~~~~~~ 217 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR-DKRVRVIEPRKGTVV------------AEKDRP 217 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET-TSEEEEEETTTTEEE------------EEEECS
T ss_pred cCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec-CCcEEEEeCCCCcee------------eeeccC
Confidence 99999999999988764 33 468999999999999999998754 458888887664210 000 11
Q ss_pred cCC-ceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce-EEEeeeeeeeCCCCCCCceeEEeccCCCCCceeE-E
Q 014302 331 GSQ-GIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL-ISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLS-V 407 (427)
Q Consensus 331 ~~~-~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~-v 407 (427)
+.+ .+..++|+|++++|++++..+.| +.|++||+++... +... . ........+++|.|+ +..|+ +
T Consensus 218 ~~~~~~~~~~~~~~~~~l~~g~~~~~d---~~i~iwd~~~~~~~~~~~-----~-~~~~~~v~~~~~s~~---~~~l~~~ 285 (402)
T 2aq5_A 218 HEGTRPVHAVFVSEGKILTTGFSRMSE---RQVALWDTKHLEEPLSLQ-----E-LDTSSGVLLPFFDPD---TNIVYLC 285 (402)
T ss_dssp SCSSSCCEEEECSTTEEEEEEECTTCC---EEEEEEETTBCSSCSEEE-----E-CCCCSSCEEEEEETT---TTEEEEE
T ss_pred CCCCcceEEEEcCCCcEEEEeccCCCC---ceEEEEcCccccCCceEE-----e-ccCCCceeEEEEcCC---CCEEEEE
Confidence 222 47999999999999985443666 7899999987653 2111 1 112223678899986 55565 5
Q ss_pred EeeCceEEEEecc
Q 014302 408 CWSSGFCCTYPLI 420 (427)
Q Consensus 408 ~~~~g~i~~~~~~ 420 (427)
|..||.|.+|++-
T Consensus 286 g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 286 GKGDSSIRYFEIT 298 (402)
T ss_dssp ETTCSCEEEEEEC
T ss_pred EcCCCeEEEEEec
Confidence 5579999999975
No 88
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.9e-24 Score=223.41 Aligned_cols=305 Identities=9% Similarity=0.049 Sum_probs=189.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceee--c-----c-----------CCcCCeeEEEEcc----CCCce
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACIL--T-----S-----------DSQRDVKVLEWRP----NGGRS 158 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~--~-----~-----------~~~~~v~~l~~sp----~~~~~ 158 (427)
.|++++|+|+|++||+++.|++|+|||+..+ +.... . + .|...|++++|++ ++..+
T Consensus 213 ~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g--~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~l 290 (902)
T 2oaj_A 213 KVIQSLYHPNSLHIITIHEDNSLVFWDANSG--HMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSL 290 (902)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTC--CEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEE
T ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCC--cEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEE
Confidence 6999999999999999999999999999876 22221 1 1 1345799999964 44467
Q ss_pred EEEecC------CeEEEEeccCCC------------------Cccccc--cC-cccc-------------------cccc
Q 014302 159 LSVGCK------GGICIWAPSYPG------------------NAASVR--SG-AASF-------------------LGAL 192 (427)
Q Consensus 159 la~g~~------~~i~iw~~~~~~------------------~~~~~~--~~-~~~~-------------------~~~~ 192 (427)
|++|++ ..+.+|++.... ...... .+ .... +...
T Consensus 291 l~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~ 370 (902)
T 2oaj_A 291 LISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLI 370 (902)
T ss_dssp EEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEE
T ss_pred EEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEE
Confidence 777743 268888853110 000000 00 0000 0000
Q ss_pred cCCCCcceeEee---------------hhcccCCCceeeeEeCCCCCC---------cccCceEEeccCCeEEEEEccCC
Q 014302 193 SRGPGTRWTLVD---------------FLRSQNGEQITALSWGPDGRF---------PGLGTPIRRGFGGLSILKWSPTG 248 (427)
Q Consensus 193 ~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~spdg~~---------l~~~~~~~~~~~~v~~~~~sp~g 248 (427)
.. .+.+.... .+..+ ...|+++++++.... ......+.+|...+..++|+|++
T Consensus 371 s~--dg~l~~~~~~~g~~~~~~~~~~~~l~~~-~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg 447 (902)
T 2oaj_A 371 LG--NGEIETMLYPSGIFTDKASLFPQNLSWL-RPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG 447 (902)
T ss_dssp ET--TSCEEEEETTTCCEECCGGGSCGGGTTB-TTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE
T ss_pred cC--CCcEEEEECCCCCcccccccCCCccccc-CCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC
Confidence 00 11111111 11122 345666666432110 00011345566677788999999
Q ss_pred CEEEEEecCCcEEEEEcCCCCccc---c---------ccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCC---
Q 014302 249 DYFFAAKFDGTFYLWETNTWTSEP---W---------SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPS--- 313 (427)
Q Consensus 249 ~~l~~~~~dg~v~iwd~~~~~~~~---~---------~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~--- 313 (427)
++|++|+.|++|++||+.++.... + ..|...|.+++|+|||++||+++. ++++++|++......
T Consensus 448 ~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~-DgtV~lwd~~~~~~~~~~ 526 (902)
T 2oaj_A 448 TAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE-TGDVVLFKYEVNQFYSVE 526 (902)
T ss_dssp EEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET-TSCEEEEEEEECCC----
T ss_pred cEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec-CcEEEEEEecCccccCcc
Confidence 999999999999999998875321 1 167889999999999999998754 558999988654210
Q ss_pred ---------ccc-----------ccc---------ccccccceee-ccCCceeEEEECCCCCEEEEEEecCCCcceeEEE
Q 014302 314 ---------LDA-----------HLL---------PVDLPDIVSL-TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIA 363 (427)
Q Consensus 314 ---------~~~-----------~~~---------~~~~~~~~~~-~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~ 363 (427)
++. +.. ...+.....+ .+.+.|++|+||||| +||+ ++.| ++|+
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAs---gs~D---~tv~ 599 (902)
T 2oaj_A 527 NRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGI---AYAA---GSLM 599 (902)
T ss_dssp -----------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEE---EETT---SEEE
T ss_pred ccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEE---EeCC---CcEE
Confidence 000 000 0000001122 266799999999999 9999 6666 7799
Q ss_pred EEEeccCceEEEeeeeeeeCCCCCCCceeEEec-----cCCCCCceeEEEeeCceEEEEec
Q 014302 364 IYDARRTPLISLSLIGFIRGPGDNPKPVAFSFH-----DKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 364 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-----~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
|||+++..++....+..+. .+....+.+++|. |+-..+.+|++|..||.|.+|++
T Consensus 600 lwd~~~~~~~~~~~~~~~~-~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 600 LIDRRGPAIIYMENIREIS-GAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEETTTTEEEEEEEGGGTC-SSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEECCCCeEEEEeehhHhc-cccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 9999877664321211111 0223346789998 76334689999999999999997
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=1e-23 Score=218.17 Aligned_cols=269 Identities=16% Similarity=0.188 Sum_probs=192.7
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
..|++++|+|++++||+++.|+.|+|||+.++ ........|...|++++|+|++..+++++.++.|++|++.
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~------ 127 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE------ 127 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG------
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC------
Confidence 37999999999999999999999999999877 4555567799999999999999555555566999999997
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC-CCCCcccCc-----------------eEEe-ccCCeE
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRFPGLGT-----------------PIRR-GFGGLS 240 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~-----------------~~~~-~~~~v~ 240 (427)
. .......+..+ ...|.+++|+| +++.+..+. .+.. +...+.
T Consensus 128 ---~---------------~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~ 188 (814)
T 3mkq_A 128 ---N---------------NWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVN 188 (814)
T ss_dssp ---G---------------TSEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCC
T ss_pred ---C---------------CceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEE
Confidence 1 11233444555 78899999999 776654321 1122 337899
Q ss_pred EEEEcc--CCCEEEEEecCCcEEEEEcCCCCccc-cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccc
Q 014302 241 ILKWSP--TGDYFFAAKFDGTFYLWETNTWTSEP-WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 241 ~~~~sp--~g~~l~~~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 317 (427)
+++|+| ++.+|++++.||.|++||+++++... +..|...|.+++|+|+++++++++. ++.+++|++......
T Consensus 189 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vwd~~~~~~~---- 263 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE-DGTLKIWNSSTYKVE---- 263 (814)
T ss_dssp EEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET-TSCEEEEETTTCSEE----
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-CCeEEEEECCCCcEE----
Confidence 999999 99999999999999999998877643 4478899999999999999988754 448888877653210
Q ss_pred ccccccccceeeccCCceeEEEECCCCC--EEEEEEecCCCcceeEEEEEEeccCce-EEEeeeeeeeC-----------
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGE--RLAVSYKGGDDIYKGLIAIYDARRTPL-ISLSLIGFIRG----------- 383 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~--~La~~~~~~~d~~~g~i~vwd~~~~~~-~~~~~~~~~~~----------- 383 (427)
.....+...+.+++|+|+|+ ++++ +.+ +.+.+|++..... +.+.|.|..-.
T Consensus 264 --------~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (814)
T 3mkq_A 264 --------KTLNVGLERSWCIATHPTGRKNYIAS---GFD----NGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDI 328 (814)
T ss_dssp --------EEECCSSSSEEEEEECTTCGGGEEEE---EET----TEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCE
T ss_pred --------EEeecCCCcEEEEEEccCCCceEEEE---EeC----CCEEEEEcCCCCceeEECCCCCEEEECcccccceee
Confidence 00111334899999999998 4555 332 2388888765322 32322221100
Q ss_pred ------------------------CCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 384 ------------------------PGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 384 ------------------------~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
......+.+++|.|+ |..|+++. +|.+.+|++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd---g~~la~~~-~~~~~i~~~ 384 (814)
T 3mkq_A 329 FTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPN---GRFVTVVG-DGEYVIYTA 384 (814)
T ss_dssp EEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTT---SSEEEEEE-TTEEEEEET
T ss_pred eeeecccccccccCccceeeeecCCCCccCCceeEECCC---CCEEEEec-CCEEEEEEC
Confidence 011113567888885 77888885 899998884
No 90
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=1.5e-24 Score=205.19 Aligned_cols=248 Identities=17% Similarity=0.141 Sum_probs=167.8
Q ss_pred ceeeeEEcCC----C---CEEEEEeCCCeEEEEEccCCCCc---ceeeccCC-----cCCeeEEEEc----cCCCc-eEE
Q 014302 101 DLQGVSWHQH----K---HIVAFISGSTQVIVRDYEDSGKD---ACILTSDS-----QRDVKVLEWR----PNGGR-SLS 160 (427)
Q Consensus 101 ~V~~l~~sp~----g---~~lat~~~d~~v~vwd~~~~~~~---~~~~~~~~-----~~~v~~l~~s----p~~~~-~la 160 (427)
.|++++|+|+ + ++|++++.|+.|++|++...... .......| ...|.+++|+ |++.. +++
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~ 143 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVA 143 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEE
T ss_pred cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEE
Confidence 7999999999 9 99999999999999999877210 04445566 5899999999 99965 455
Q ss_pred EecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhc------ccCCCceeeeEeCCCCCCcccCc----
Q 014302 161 VGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLR------SQNGEQITALSWGPDGRFPGLGT---- 230 (427)
Q Consensus 161 ~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~spdg~~l~~~~---- 230 (427)
++.++.|++|++........ +. ...+.....+. ..+...+.+++|+|++ ++..+.
T Consensus 144 ~~~dg~i~iwd~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~ 208 (397)
T 1sq9_A 144 TDVKGTTYIWKFHPFADESN---SL-----------TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT 208 (397)
T ss_dssp EETTSCEEEEEEESSSSHHH---HT-----------TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE
T ss_pred EeCCCcEEEEeCCccccccc---cc-----------eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc
Confidence 55669999999972000000 00 00000000121 2237789999999999 754321
Q ss_pred -------------eEEe---c---cCCeEEEEEccCCCEEEEEecC---CcEEEEEcCCCCccc-ccc------------
Q 014302 231 -------------PIRR---G---FGGLSILKWSPTGDYFFAAKFD---GTFYLWETNTWTSEP-WSS------------ 275 (427)
Q Consensus 231 -------------~~~~---~---~~~v~~~~~sp~g~~l~~~~~d---g~v~iwd~~~~~~~~-~~~------------ 275 (427)
.+.. | ...+.+++|+|++++|++++.| +.|++||+++.+... +..
T Consensus 209 i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 209 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCB
T ss_pred EEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccc
Confidence 1344 6 7889999999999999999999 999999999887633 335
Q ss_pred -CCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Ccc------cccccc-ccccceeeccCCceeEEEECCCC-
Q 014302 276 -TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLD------AHLLPV-DLPDIVSLTGSQGIEKIAWDASG- 344 (427)
Q Consensus 276 -~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~------~~~~~~-~~~~~~~~~~~~~i~~v~~sp~g- 344 (427)
|...|.+++|+|++++|++++ .++.+++|++..... .+. +|.... .......-.+...|.+++|+|+|
T Consensus 289 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 289 AHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp SBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred ccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccc
Confidence 899999999999999999875 455888888866421 111 110000 00000000015689999999999
Q ss_pred ---------CEEEEEEecCCCcceeEEEEEEeccC
Q 014302 345 ---------ERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 345 ---------~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
++|++ ++.| |.|++|+++++
T Consensus 368 ~~~~~~~~~~~l~s---~~~d---g~i~iw~~~~g 396 (397)
T 1sq9_A 368 RSGMGADLNESLCC---VCLD---RSIRWFREAGG 396 (397)
T ss_dssp SBSTTCTTSCEEEE---EETT---TEEEEEEEEC-
T ss_pred cccccccccceEEE---ecCC---CcEEEEEcCCC
Confidence 78888 5556 67999999875
No 91
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9.2e-24 Score=219.71 Aligned_cols=255 Identities=10% Similarity=0.112 Sum_probs=172.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|++++|+|++++||+|+.|++|+||+.... .......|...|.+++|+| +..+++++.++.|++||+.
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~---~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~------- 87 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQV---EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY------- 87 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTC---EEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT-------
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCc---EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC-------
Confidence 7999999999999999999999999997655 3333456788999999999 7435555567999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTF 260 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v 260 (427)
++ .++. .+. +...|++++|+|++++|++|+.||.|
T Consensus 88 --~~----------------~~~~--------------------------~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V 122 (902)
T 2oaj_A 88 --SQ----------------KVLT--------------------------TVF-VPGKITSIDTDASLDWMLIGLQNGSM 122 (902)
T ss_dssp --TC----------------SEEE--------------------------EEE-CSSCEEEEECCTTCSEEEEEETTSCE
T ss_pred --CC----------------cEEE--------------------------EEc-CCCCEEEEEECCCCCEEEEEcCCCcE
Confidence 11 1111 111 34578999999999999999999999
Q ss_pred EEEEcCCCCcc------------ccccCCCCeeEEEECCCC-CEEEEEEcCCceeeeeeeCCCCC--Ccccccccccccc
Q 014302 261 YLWETNTWTSE------------PWSSTSGFVTGATWDPEG-RMILLAFAGSLTLGSIHFASKPP--SLDAHLLPVDLPD 325 (427)
Q Consensus 261 ~iwd~~~~~~~------------~~~~~~~~v~~v~~spdg-~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~ 325 (427)
++||+++.+.. ....|...|.+++|+|++ ..+++ +..++.+ +|++..... .+..|..+.....
T Consensus 123 ~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~-g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~ 200 (902)
T 2oaj_A 123 IVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI-SYEYVTL-TYSLVENEIKQSFIYELPPFAPGG 200 (902)
T ss_dssp EEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE-ECSSCEE-EEETTTTEEEEEECCCBCTTCCCS
T ss_pred EEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE-EeCCCcE-EEECCCCceEEEEecccCCcCCCc
Confidence 99999887642 223688999999999975 55555 4566688 888776421 1222210000000
Q ss_pred ----ceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCC-----------CCCCCc
Q 014302 326 ----IVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGP-----------GDNPKP 390 (427)
Q Consensus 326 ----~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~-----------~~~~~~ 390 (427)
.....+...|.+++|+|+|++||+ ++.| |+|++||+++++++.........+. ......
T Consensus 201 ~~~~~~~~~h~~~V~~v~fspdg~~las---gs~D---g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V 274 (902)
T 2oaj_A 201 DFSEKTNEKRTPKVIQSLYHPNSLHIIT---IHED---NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKI 274 (902)
T ss_dssp TTCCCTTSCBCCCEEEEEECTTSSEEEE---EETT---CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEE
T ss_pred ccccccccccCCCeEEEEEcCCCCEEEE---EECC---CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCe
Confidence 000112357999999999999999 5666 6799999998877543111000000 011235
Q ss_pred eeEEeccCCC--CCceeEEEeeC-----ceEEEEec
Q 014302 391 VAFSFHDKFK--QGPLLSVCWSS-----GFCCTYPL 419 (427)
Q Consensus 391 ~~~~f~~~~~--~g~~l~v~~~~-----g~i~~~~~ 419 (427)
.+++|.+... .+.+|++|..+ ..+.+|++
T Consensus 275 ~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 275 SKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred eEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 6788976533 23577777443 36777764
No 92
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=5.4e-24 Score=213.00 Aligned_cols=226 Identities=12% Similarity=0.114 Sum_probs=168.0
Q ss_pred c-eeeeEEcC--CCCEEEEEeCCCeEEEEEccCC------CCcceeeccCCcCCeeEEEEccCCCceEEEecC----CeE
Q 014302 101 D-LQGVSWHQ--HKHIVAFISGSTQVIVRDYEDS------GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK----GGI 167 (427)
Q Consensus 101 ~-V~~l~~sp--~g~~lat~~~d~~v~vwd~~~~------~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~----~~i 167 (427)
. |++++|+| ++++||+++.|++|+|||+..+ ..........|...|.+++|+|++..+++++.+ +.|
T Consensus 65 ~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v 144 (615)
T 1pgu_A 65 SVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 144 (615)
T ss_dssp SCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEE
T ss_pred ceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEE
Confidence 6 99999999 9999999999999999999643 223444556688999999999999545444444 477
Q ss_pred EEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCC-CcccC--------------c--
Q 014302 168 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-FPGLG--------------T-- 230 (427)
Q Consensus 168 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~--------------~-- 230 (427)
.+|+.. .....+..| ...|.+++|+|+++ .+.++ .
T Consensus 145 ~~~d~~---------------------------~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~ 196 (615)
T 1pgu_A 145 ISWDSG---------------------------NSLGEVSGH-SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 196 (615)
T ss_dssp EETTTC---------------------------CEEEECCSC-SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE
T ss_pred EEEECC---------------------------CcceeeecC-CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee
Confidence 788754 234445555 78899999999997 33322 1
Q ss_pred -eEEeccC---CeEEEEEccC-CCEEEEEecCCcEEEEEcCCCCccccc-----cCCCCeeEEEECCCCCEEEEEEcCCc
Q 014302 231 -PIRRGFG---GLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTSEPWS-----STSGFVTGATWDPEGRMILLAFAGSL 300 (427)
Q Consensus 231 -~~~~~~~---~v~~~~~sp~-g~~l~~~~~dg~v~iwd~~~~~~~~~~-----~~~~~v~~v~~spdg~~l~~~~~~~~ 300 (427)
.+..|.. .|.+++|+|+ +++|++++.|+.|++||+++++..... .|...|.+++|+ ++++|++++.+ +
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-~ 274 (615)
T 1pgu_A 197 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD-A 274 (615)
T ss_dssp EEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT-S
T ss_pred eeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC-C
Confidence 1334667 8999999999 999999999999999999988874433 789999999999 99999887554 5
Q ss_pred eeeeeeeCCCCC--CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 301 TLGSIHFASKPP--SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 301 ~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.+.+|++..... .+..+. ......+.++.|+ ++++|++ ++.+ +.|++||+.++..+
T Consensus 275 ~i~~wd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~l~~---~~~~---g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 275 TIRVWDVTTSKCVQKWTLDK----------QQLGNQQVGVVAT-GNGRIIS---LSLD---GTLNFYELGHDEVL 332 (615)
T ss_dssp EEEEEETTTTEEEEEEECCT----------TCGGGCEEEEEEE-ETTEEEE---EETT---SCEEEEETTEEEEE
T ss_pred cEEEEECCCCcEEEEEcCCC----------CcccCceeEEEeC-CCCeEEE---EECC---CCEEEEECCCCcEE
Confidence 888888765421 111110 0012367888886 8999988 4555 56999999875544
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.8e-23 Score=199.37 Aligned_cols=250 Identities=10% Similarity=0.013 Sum_probs=175.7
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCc-ceeec---------------------------------------
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKD-ACILT--------------------------------------- 139 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~-~~~~~--------------------------------------- 139 (427)
+++++++|+|+|++|+++ .++.|++||+.++... .....
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999977666 5789999998876300 11111
Q ss_pred ---------------cCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEe
Q 014302 140 ---------------SDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLV 203 (427)
Q Consensus 140 ---------------~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (427)
..|...|++++|+|++..+++++ .++.|++|++.... + ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~--------------------~---~~~ 140 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS--------------------K---NVL 140 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS--------------------S---SCE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC--------------------C---cee
Confidence 12444799999999996555666 45999999986100 0 001
Q ss_pred ehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc-----ccccCCC
Q 014302 204 DFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSG 278 (427)
Q Consensus 204 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-----~~~~~~~ 278 (427)
..+. ...+...+.+++|+|++++|++++.+|.|++|++.+.+.. .+..|..
T Consensus 141 ~~~~------------------------~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~ 196 (450)
T 2vdu_B 141 KLRK------------------------RFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVS 196 (450)
T ss_dssp EEEE------------------------EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSS
T ss_pred eeee------------------------cccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccC
Confidence 1010 0124567999999999999999999999999999887654 4458999
Q ss_pred CeeEEEECCC---CCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCC
Q 014302 279 FVTGATWDPE---GRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGD 355 (427)
Q Consensus 279 ~v~~v~~spd---g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~ 355 (427)
.|.+++|+|+ +++|++++. ++.+++|++....... .....+.+.|.+++|+ ++++|++ ++.
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~-d~~i~vwd~~~~~~~~-----------~~~~~h~~~v~~~~~s-d~~~l~s---~~~ 260 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDR-DEHIKISHYPQCFIVD-----------KWLFGHKHFVSSICCG-KDYLLLS---AGG 260 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEET-TSCEEEEEESCTTCEE-----------EECCCCSSCEEEEEEC-STTEEEE---EES
T ss_pred ceEEEEEcCCCCCCcEEEEEcC-CCcEEEEECCCCceee-----------eeecCCCCceEEEEEC-CCCEEEE---EeC
Confidence 9999999999 888887754 5589999887642110 0011244589999999 9999998 455
Q ss_pred CcceeEEEEEEeccCceEEEeeeee-ee---------------C--CCCCCCceeEEeccCCCCCceeEEEe-eCceEEE
Q 014302 356 DIYKGLIAIYDARRTPLISLSLIGF-IR---------------G--PGDNPKPVAFSFHDKFKQGPLLSVCW-SSGFCCT 416 (427)
Q Consensus 356 d~~~g~i~vwd~~~~~~~~~~~~~~-~~---------------~--~~~~~~~~~~~f~~~~~~g~~l~v~~-~~g~i~~ 416 (427)
| ++|+|||+.++.++.....+. +. . ........+++|.|+ +..|+++. .++.|.+
T Consensus 261 d---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~l~~~~~~d~~i~i 334 (450)
T 2vdu_B 261 D---DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN---LPFVAFFVEATKCIII 334 (450)
T ss_dssp S---SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS---SSEEEEEETTCSEEEE
T ss_pred C---CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC---CCEEEEEECCCCeEEE
Confidence 6 679999999988765433210 00 0 011223567888875 66788877 8999999
Q ss_pred Eec
Q 014302 417 YPL 419 (427)
Q Consensus 417 ~~~ 419 (427)
|++
T Consensus 335 w~~ 337 (450)
T 2vdu_B 335 LEM 337 (450)
T ss_dssp EEE
T ss_pred EEe
Confidence 998
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.6e-23 Score=198.78 Aligned_cols=258 Identities=11% Similarity=0.041 Sum_probs=175.1
Q ss_pred ceeeeEEcCCCCEE-EEEeCCCeEEEEEcc--CCCCcceeec--cCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCC
Q 014302 101 DLQGVSWHQHKHIV-AFISGSTQVIVRDYE--DSGKDACILT--SDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp~g~~l-at~~~d~~v~vwd~~--~~~~~~~~~~--~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~ 175 (427)
.|++++|+|++++| |+++.|++|+||++. .+ ...... ..|...|++++|+|++..+++++.++.+.+|++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~-- 179 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDIN-- 179 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT--
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--ceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecC--
Confidence 79999999999986 899999999999998 44 233322 3577889999999999544444455899999986
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC---CCEEE
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT---GDYFF 252 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~---g~~l~ 252 (427)
.+ .... . ....+..|...|.+++|+|+ +++|+
T Consensus 180 -------~~----------------~~~~-------~---------------~~~~~~~h~~~v~~~~~sp~~~~~~~l~ 214 (450)
T 2vdu_B 180 -------SI----------------PEEK-------F---------------TQEPILGHVSMLTDVHLIKDSDGHQFII 214 (450)
T ss_dssp -------SC----------------CCSS-------C---------------CCCCSEECSSCEEEEEEEECTTSCEEEE
T ss_pred -------Cc----------------cccc-------c---------------cceeeecccCceEEEEEcCCCCCCcEEE
Confidence 11 0000 0 00134457788999999999 99999
Q ss_pred EEecCCcEEEEEcCCCCccc--cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Cccccc--ccc-----
Q 014302 253 AAKFDGTFYLWETNTWTSEP--WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHL--LPV----- 321 (427)
Q Consensus 253 ~~~~dg~v~iwd~~~~~~~~--~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~--~~~----- 321 (427)
+++.|+.|++||+++++... ...|...|.+++|+ ++++|++++ .++.+++|++..... .+..+. .+.
T Consensus 215 s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (450)
T 2vdu_B 215 TSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG-GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQH 292 (450)
T ss_dssp EEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE-SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTS
T ss_pred EEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEe-CCCeEEEEECCCCcEeeeecchhhhhhhhhhcc
Confidence 99999999999999887643 33799999999999 999999875 555888998876532 111110 000
Q ss_pred ----ccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEe--ccCceEEEeeeeeeeCCCCCCCceeEEe
Q 014302 322 ----DLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDA--RRTPLISLSLIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 322 ----~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~f 395 (427)
.+...........|.+++|+|++++|+++ +..+ +.|+||++ ..+..+ .....+.+. ..+.+++|
T Consensus 293 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~--~~~d---~~i~iw~~~~~~~~~l--~~~~~~~~~---~~v~~~~~ 362 (450)
T 2vdu_B 293 LAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF--VEAT---KCIIILEMSEKQKGDL--ALKQIITFP---YNVISLSA 362 (450)
T ss_dssp BC----------CBCCCEEEEEECSSSSEEEEE--ETTC---SEEEEEEECSSSTTCE--EEEEEEECS---SCEEEEEE
T ss_pred cccccccccccccceEEEEEEEEeCCCCEEEEE--ECCC---CeEEEEEeccCCCCce--eeccEeccC---CceEEEEe
Confidence 00000000123478999999999999995 3244 67999999 444221 111233332 34779999
Q ss_pred ccCCCCCceeEEEee------CceEEEEecccc
Q 014302 396 HDKFKQGPLLSVCWS------SGFCCTYPLIFR 422 (427)
Q Consensus 396 ~~~~~~g~~l~v~~~------~g~i~~~~~~~~ 422 (427)
.|+ +.+++++.. +..|.+|.+-..
T Consensus 363 ~~~---~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 363 HND---EFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp ETT---EEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred cCC---cEEEEEecccCCCCCCcceEEEEEEcC
Confidence 984 445555543 445788876544
No 95
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=3.1e-23 Score=193.59 Aligned_cols=265 Identities=9% Similarity=0.112 Sum_probs=175.5
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~ 179 (427)
.|++++|+|||++||+|+.+ .++||+++.. ..... .+...+..++|.++++.+++++ .++.|++||+.
T Consensus 21 ~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~------ 89 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLK-SFEIYNVHPV--AHIMS--QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV------ 89 (355)
T ss_dssp CCCEEEECTTSSEEEEECSS-EEEEEEETTE--EEEEE--EECSCCCEEEECTTSSEEEEECSSTTEEEEEETT------
T ss_pred ceEEEEECCCCCEEEEEcCC-EEEEEecCCc--ceeee--eecCCeEEEEEcCCCCEEEEEECCccEEEEEECC------
Confidence 79999999999999999766 5789998765 22222 1223588889998885554444 45899999987
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEe------------ccCCeEEEEEccC
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRR------------GFGGLSILKWSPT 247 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~------------~~~~v~~~~~sp~ 247 (427)
++ ..+..+. ....|.+++|+++...++....++. .......+++++
T Consensus 90 ---~~----------------~~~~~~~--~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~- 147 (355)
T 3vu4_A 90 ---KK----------------QDVSRIK--VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN- 147 (355)
T ss_dssp ---TT----------------EEEEEEE--CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET-
T ss_pred ---CC----------------cEEEEEE--CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc-
Confidence 11 2333333 2457888888876543322111111 001334456777
Q ss_pred CCEEEE--EecCCcEEEEEcCCCC-----------------ccccccCCCCeeEEEECCCCCEEEEEEcCCce-eeeeee
Q 014302 248 GDYFFA--AKFDGTFYLWETNTWT-----------------SEPWSSTSGFVTGATWDPEGRMILLAFAGSLT-LGSIHF 307 (427)
Q Consensus 248 g~~l~~--~~~dg~v~iwd~~~~~-----------------~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~-i~~~~~ 307 (427)
.++++ |+.||.|++||+++.+ ...+..|...|.+++|+|+|++|++++.++ . +++|++
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~-~~v~iwd~ 225 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDG-TIIRVFKT 225 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTC-SEEEEEET
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCC-CEEEEEEC
Confidence 66664 6889999999999765 334458999999999999999999876554 6 888888
Q ss_pred CCCCCCccccccccccccceeec---cCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeee-e----
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLT---GSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLI-G---- 379 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~-~---- 379 (427)
.+... ...+. +.+.|.+++|+|+|++||+ ++.| ++|+|||++.......... +
T Consensus 226 ~~~~~-------------~~~~~~g~h~~~v~~~~~s~~~~~l~s---~s~d---~~v~iw~~~~~~~~~~~~~~~~~~~ 286 (355)
T 3vu4_A 226 EDGVL-------------VREFRRGLDRADVVDMKWSTDGSKLAV---VSDK---WTLHVFEIFNDQDNKRHALKGWINM 286 (355)
T ss_dssp TTCCE-------------EEEEECTTCCSCEEEEEECTTSCEEEE---EETT---CEEEEEESSCCSCCCSEETTTTEEC
T ss_pred CCCcE-------------EEEEEcCCCCCcEEEEEECCCCCEEEE---EECC---CEEEEEEccCCCCcccccccceeec
Confidence 76421 11111 4458999999999999999 5556 7799999976532111000 0
Q ss_pred -e---------ee-CCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecccc
Q 014302 380 -F---------IR-GPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIFR 422 (427)
Q Consensus 380 -~---------~~-~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~~ 422 (427)
+ .. ..........++|.++ +..|+++..||.+.+|.+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d---~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 287 KYFQSEWSLCNFKLSVDKHVRGCKIAWISE---SSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp CCCCCSSCSEEEECCCCTTCCCCEEEESSS---SEEEEEETTTTEEEEEEEEEE
T ss_pred cccccccceeEEEeccCCCCCceEEEEeCC---CCEEEEEeCCCeEEEEEEEcC
Confidence 0 00 0111112246788875 778999999999999987643
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=5.9e-23 Score=196.69 Aligned_cols=263 Identities=12% Similarity=0.065 Sum_probs=192.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCccee-----eccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACI-----LTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSY 174 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~-----~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~ 174 (427)
.+.+++|+|++.++++++.++.|++||+..+ .... ...+|...|.+++|+|++ .+++++. ++.|++|+++
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~- 199 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSG--QTVRLSPPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLK- 199 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTC--CEEEECCCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETT-
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCC--eEeeecCcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECC-
Confidence 4678999997778888888999999999876 2222 234688899999999998 5666664 5999999987
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc-cC--------------ceEEe--ccC
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG-LG--------------TPIRR--GFG 237 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-~~--------------~~~~~--~~~ 237 (427)
++ .....+..+ ...+.+++|+|+++.+. .+ ..+.. ...
T Consensus 200 --------~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 254 (433)
T 3bws_A 200 --------TL----------------AYKATVDLT-GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG 254 (433)
T ss_dssp --------TC----------------CEEEEEECS-SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS
T ss_pred --------Cc----------------eEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC
Confidence 11 223333333 66788999999998642 11 11111 234
Q ss_pred CeEEEEEccCCCEEEEEe--------cCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 238 GLSILKWSPTGDYFFAAK--------FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~--------~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
.+.+++|+|+|++|++++ .|+.|++||+++++......+...+..++|+|+++.+++++..++.+.+|++..
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 588999999999999777 488999999998876555556668899999999998887777888898888775
Q ss_pred CCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCC------------CcceeEEEEEEeccCceEEEee
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGD------------DIYKGLIAIYDARRTPLISLSL 377 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~------------d~~~g~i~vwd~~~~~~~~~~~ 377 (427)
... ...+.....+.+++|+|+|++|+++..+.. | |.|++||+.+++.+....
T Consensus 335 ~~~-------------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~d---g~v~~~d~~~~~~~~~~~ 398 (433)
T 3bws_A 335 KKV-------------QKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVL---GKVYVIDTTTDTVKEFWE 398 (433)
T ss_dssp TEE-------------EEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSC---CEEEEEETTTTEEEEEEE
T ss_pred CcE-------------EEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccc---eEEEEEECCCCcEEEEec
Confidence 311 112233457899999999999988644321 3 679999999887664322
Q ss_pred eeeeeCCCCCCCceeEEeccCCCCCceeEEEee-CceEEEEec
Q 014302 378 IGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWS-SGFCCTYPL 419 (427)
Q Consensus 378 ~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~-~g~i~~~~~ 419 (427)
. ...+.+++|.|+ |..|+++.. +|.|.+|++
T Consensus 399 -----~---~~~~~~~~~s~d---g~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 399 -----A---GNQPTGLDVSPD---NRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp -----C---SSSEEEEEECTT---SCEEEEEETTTTEEEEEEE
T ss_pred -----C---CCCCceEEEcCC---CCEEEEEECCCCeEEEEEe
Confidence 2 123668999886 667777664 999999985
No 97
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=4.2e-24 Score=196.17 Aligned_cols=221 Identities=18% Similarity=0.266 Sum_probs=152.8
Q ss_pred ceeeeEEcC--CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEe-cCCeEEEEeccCC
Q 014302 101 DLQGVSWHQ--HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVG-CKGGICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp--~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g-~~~~i~iw~~~~~ 175 (427)
.|++++|+| ++++||+|+.|++|+|||+..+.........+|...|++++|+|+ + .+|++| .++.|++|++...
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCC
Confidence 799999986 489999999999999999987633344455679999999999998 5 566665 4599999998711
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEe
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAK 255 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 255 (427)
..+.....+..| ...+.+++|+|++.. +..+. +..+ ....++++|++++
T Consensus 138 ----------------------~~~~~~~~~~~h-~~~v~~~~~~~~~~~---~~~~~-~~~~----~~~~~~~~l~sgs 186 (316)
T 3bg1_A 138 ----------------------GQWEVKKINNAH-TIGCNAVSWAPAVVP---GSLID-HPSG----QKPNYIKRFASGG 186 (316)
T ss_dssp ----------------------SCEEECCBTTSS-SSCBCCCEECCCCCC----------CCS----CCCCCCCBEECCB
T ss_pred ----------------------CCcceeeeeccc-cCCcceEEEccccCC---ccccc-cccc----cCccccceEEEec
Confidence 012223334444 667888888887431 00000 0000 0112467899999
Q ss_pred cCCcEEEEEcCCCC---c-cccccCCCCeeEEEECCCC----CEEEEEEcCCceeeeeeeCCCCC-Cccccccccccccc
Q 014302 256 FDGTFYLWETNTWT---S-EPWSSTSGFVTGATWDPEG----RMILLAFAGSLTLGSIHFASKPP-SLDAHLLPVDLPDI 326 (427)
Q Consensus 256 ~dg~v~iwd~~~~~---~-~~~~~~~~~v~~v~~spdg----~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~ 326 (427)
.|+.|++||++... . ..+..|...|.+++|+|++ ++|++++ .++.+++|++..... .... .
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s-~D~~v~iw~~~~~~~~~~~~---------~ 256 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS-QDGRVFIWTCDDASSNTWSP---------K 256 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE-TTCEEEEEECSSTTCCCCBC---------C
T ss_pred CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc-CCCeEEEEEccCccccchhh---------h
Confidence 99999999997542 2 3445899999999999987 7787664 555888888765211 0000 0
Q ss_pred eeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 327 VSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 327 ~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
....+.+.|.+++|+|+|++||+ ++.| ++|+||+...
T Consensus 257 ~~~~~~~~v~~v~~sp~g~~las---~~~D---~~v~lw~~~~ 293 (316)
T 3bg1_A 257 LLHKFNDVVWHVSWSITANILAV---SGGD---NKVTLWKESV 293 (316)
T ss_dssp EEEECSSCEEEEEECTTTCCEEE---EESS---SCEEEEEECT
T ss_pred hhhcCCCcEEEEEEcCCCCEEEE---EcCC---CeEEEEEECC
Confidence 01123458999999999999999 4555 6699999863
No 98
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.1e-24 Score=196.98 Aligned_cols=237 Identities=13% Similarity=0.107 Sum_probs=165.3
Q ss_pred eEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccC
Q 014302 105 VSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSG 184 (427)
Q Consensus 105 l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~ 184 (427)
..+.+++.+|++|+.|++|++||+..+. ...... ...|.++.|+|+ +++++.|+.+++|+.+.
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~--~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~---------- 104 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSK--TITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN---------- 104 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSS--CEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT----------
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCc--EEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC----------
Confidence 3456788999999999999999998772 222222 467888899988 66666779999999860
Q ss_pred cccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEE----eccCCeEEEEEcc--CCCEEEEEecCC
Q 014302 185 AASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIR----RGFGGLSILKWSP--TGDYFFAAKFDG 258 (427)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~----~~~~~v~~~~~sp--~g~~l~~~~~dg 258 (427)
.+...... .+..++ .|...|.+++|+| ++++|++++.||
T Consensus 105 -----------------~~~~~~~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg 149 (343)
T 3lrv_A 105 -----------------QITILDSK------------------TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRG 149 (343)
T ss_dssp -----------------EEEEEETT------------------TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTC
T ss_pred -----------------ceEEeecC------------------CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCC
Confidence 01001100 111111 2447899999999 999999999999
Q ss_pred cEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCC---ccccccccccccceeeccCC
Q 014302 259 TFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPS---LDAHLLPVDLPDIVSLTGSQ 333 (427)
Q Consensus 259 ~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 333 (427)
.|++||+++++..... .+...+.+++|+|+|++|++++ .++.+++|++...... +.. .+.+
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~-~dg~i~iwd~~~~~~~~~~~~~-------------~h~~ 215 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS-PDGILDVYNLSSPDQASSRFPV-------------DEEA 215 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC-TTSCEEEEESSCTTSCCEECCC-------------CTTS
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCCCCccEEec-------------cCCC
Confidence 9999999988874332 4566799999999999998765 5558889988775321 111 1345
Q ss_pred ceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEee-Cc
Q 014302 334 GIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWS-SG 412 (427)
Q Consensus 334 ~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~-~g 412 (427)
.|.+++|+|+|.+|+++. + ++|++||++....+.... . +..........+++|.|+ |..|+++.. ++
T Consensus 216 ~v~~l~fs~~g~~l~s~~---~----~~v~iwd~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~---g~~l~~~s~~d~ 283 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVEC---D----QTVVCFDLRKDVGTLAYP-T-YTIPEFKTGTVTYDIDDS---GKNMIAYSNESN 283 (343)
T ss_dssp CEEEEEECTTSSEEEEEE---S----SBEEEEETTSSTTCBSSC-C-CBC-----CCEEEEECTT---SSEEEEEETTTT
T ss_pred CEEEEEEeCCCCEEEEEe---C----CeEEEEEcCCCCcceeec-c-cccccccccceEEEECCC---CCEEEEecCCCC
Confidence 899999999999999953 2 249999998876532110 0 000111111146899986 778999888 99
Q ss_pred eEEEEec
Q 014302 413 FCCTYPL 419 (427)
Q Consensus 413 ~i~~~~~ 419 (427)
.|.+|++
T Consensus 284 ~i~v~~~ 290 (343)
T 3lrv_A 284 SLTIYKF 290 (343)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999976
No 99
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=1.8e-23 Score=197.14 Aligned_cols=222 Identities=13% Similarity=0.119 Sum_probs=155.4
Q ss_pred ceeeeEEcC-CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp-~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
.|.+++|+| ++++|++++.|+.|++||+.............|...|.+++|+|++..+++++.++.|++||+.
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~------ 193 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD------ 193 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT------
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC------
Confidence 899999999 7789999999999999999864111112223355789999999999544444556999999985
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCC-CcccC------------------ceE--EeccCC
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGR-FPGLG------------------TPI--RRGFGG 238 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~------------------~~~--~~~~~~ 238 (427)
+ ..+..+..| ...|.+++|+|+++ +++++ ..+ ..|...
T Consensus 194 -----------------~---~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (383)
T 3ei3_B 194 -----------------G---HEIFKEKLH-KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP 252 (383)
T ss_dssp -----------------S---CEEEEEECS-SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC
T ss_pred -----------------C---CEEEEeccC-CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc
Confidence 1 123334555 78899999999998 43322 111 247789
Q ss_pred eEEEEEcc-CCCEEEEEecCCcEEEEEcCCCCccc-cc-------cCCCCeeEEEECCCCCEEEEEE--------cCCce
Q 014302 239 LSILKWSP-TGDYFFAAKFDGTFYLWETNTWTSEP-WS-------STSGFVTGATWDPEGRMILLAF--------AGSLT 301 (427)
Q Consensus 239 v~~~~~sp-~g~~l~~~~~dg~v~iwd~~~~~~~~-~~-------~~~~~v~~v~~spdg~~l~~~~--------~~~~~ 301 (427)
+.+++|+| ++++|++++.|+.|++||+++++... +. .+...+. +.|+|++..++++. +.++.
T Consensus 253 v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s~dg~~s~s~d~~ 331 (383)
T 3ei3_B 253 VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRYPDDQLLLNDKRT 331 (383)
T ss_dssp EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEECBCCTTTCTTCCCC
T ss_pred eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE-EeccCCCCceEEEecCCcccccCCCCe
Confidence 99999999 99999999999999999999877632 22 2233333 35555555544432 35668
Q ss_pred eeeeeeCCCCC--CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 302 LGSIHFASKPP--SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 302 i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
+++|++..... .+.+ ..+.+.+..++|+|++++||++ + | +.|+|||+++
T Consensus 332 i~iwd~~~~~~~~~l~~------------~~~~~~~~~~~~s~~g~~l~s~---s-d---~~i~iw~~~~ 382 (383)
T 3ei3_B 332 IDIYDANSGGLVHQLRD------------PNAAGIISLNKFSPTGDVLASG---M-G---FNILIWNRED 382 (383)
T ss_dssp EEEEETTTCCEEEEECB------------TTBCSCCCEEEECTTSSEEEEE---E-T---TEEEEEECC-
T ss_pred EEEEecCCCceeeeecC------------CCCCceEEEEEEecCccEEEEe---c-C---CcEEEEecCC
Confidence 88888765421 1111 0123467788999999999984 3 4 6699999864
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.9e-23 Score=189.22 Aligned_cols=235 Identities=8% Similarity=0.024 Sum_probs=157.0
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCC-------CCc-ceeeccCCcCCeeEEEEcc--CCCceEEEecCCeEEE
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDS-------GKD-ACILTSDSQRDVKVLEWRP--NGGRSLSVGCKGGICI 169 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~-------~~~-~~~~~~~~~~~v~~l~~sp--~~~~~la~g~~~~i~i 169 (427)
..|.++.|+|+ +++++.|++|++|+.... ... .......|...|.+++|+| ++..+++++.++.|++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~ 153 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGF 153 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEE
Confidence 36788889998 999999999999987632 111 2233346778899999999 8854444556799999
Q ss_pred EeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCC
Q 014302 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGD 249 (427)
Q Consensus 170 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~ 249 (427)
||+. .+ ........ .+...+.+++|+|+|+
T Consensus 154 wd~~---------~~----------------~~~~~~~~-------------------------~~~~~i~~~~~~pdg~ 183 (343)
T 3lrv_A 154 QSYE---------DD----------------SQYIVHSA-------------------------KSDVEYSSGVLHKDSL 183 (343)
T ss_dssp EESS---------SS----------------CEEEEECC-------------------------CSSCCCCEEEECTTSC
T ss_pred EECC---------CC----------------cEEEEEec-------------------------CCCCceEEEEECCCCC
Confidence 9997 11 11111110 1334688999999999
Q ss_pred EEEEEecCCcEEEEEcCCCCcc--cccc-CCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCC--ccccccccccc
Q 014302 250 YFFAAKFDGTFYLWETNTWTSE--PWSS-TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPS--LDAHLLPVDLP 324 (427)
Q Consensus 250 ~l~~~~~dg~v~iwd~~~~~~~--~~~~-~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~ 324 (427)
+|++|+.||.|++||+++++.. .+.. |...|.+++|+|+|.+|++++ ++ .+++|++...... +.....
T Consensus 184 ~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~~~~~~~~----- 256 (343)
T 3lrv_A 184 LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTLAYPTYTI----- 256 (343)
T ss_dssp EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SS-BEEEEETTSSTTCBSSCCCBC-----
T ss_pred EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CC-eEEEEEcCCCCcceeeccccc-----
Confidence 9999999999999999998875 4455 899999999999999999877 55 8889988765321 111000
Q ss_pred cceeeccCCce--eEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce-EEEeeeeeeeCCCCCCCceeEEeccCCCC
Q 014302 325 DIVSLTGSQGI--EKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL-ISLSLIGFIRGPGDNPKPVAFSFHDKFKQ 401 (427)
Q Consensus 325 ~~~~~~~~~~i--~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 401 (427)
+...+ .+++|+|+|++|+++. +.+ +.|+||++..... ....+ ..+++|.+....
T Consensus 257 ------~~~~~~~~~~~~~~~g~~l~~~s--~~d---~~i~v~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 313 (343)
T 3lrv_A 257 ------PEFKTGTVTYDIDDSGKNMIAYS--NES---NSLTIYKFDKKTKNWTKDE------------ESALCLQSDTAD 313 (343)
T ss_dssp -----------CCEEEEECTTSSEEEEEE--TTT---TEEEEEEECTTTCSEEEEE------------EEECCC----CC
T ss_pred ------ccccccceEEEECCCCCEEEEec--CCC---CcEEEEEEcccccceEecC------------ceeEecCccccc
Confidence 00122 4699999999999952 213 5599999965432 21111 123344443223
Q ss_pred CceeEEEeeCceEEEE
Q 014302 402 GPLLSVCWSSGFCCTY 417 (427)
Q Consensus 402 g~~l~v~~~~g~i~~~ 417 (427)
+..|+++..+|.+.++
T Consensus 314 ~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 314 FTDMDVVCGDGGIAAI 329 (343)
T ss_dssp CCEEEEEEETTEEEEE
T ss_pred cceeEEEecCCceEEE
Confidence 4556666677766654
No 101
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=1.1e-23 Score=199.56 Aligned_cols=226 Identities=14% Similarity=0.126 Sum_probs=141.5
Q ss_pred CCCCC--ceeeeEEcC--------CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cC
Q 014302 96 LLPEV--DLQGVSWHQ--------HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CK 164 (427)
Q Consensus 96 ~l~~~--~V~~l~~sp--------~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~ 164 (427)
.+.+| .|++++|+| |+++||+++.|++|+|||+... ........|...|.+++|+|++..+|+++ .+
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 35566 899999998 8899999999999999999876 44555567888999999999986666666 45
Q ss_pred CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEE
Q 014302 165 GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKW 244 (427)
Q Consensus 165 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~ 244 (427)
+.|++||+......... .. ........+......+ .........|...+.++.|
T Consensus 209 ~~v~~wd~~t~~~~~~~---------------------~~-~~~~~~~~~~s~~~~~----~~~~~~~~~~~~~v~~v~~ 262 (393)
T 4gq1_A 209 GNIRIFDWTLNLSAEEN---------------------SQ-TELVKNPWLLTLNTLP----LVNTCHSSGIASSLANVRW 262 (393)
T ss_dssp SEEEEEETTCCC--------------------------------CSCCCSEEEESGG----GC------CCSSSCSEEEE
T ss_pred CEEEEEECCCCcccccc---------------------cc-cCCcccceEEeccccc----ceeeeecccccccceeeee
Confidence 99999999721110000 00 0000011111111111 1112223457778999998
Q ss_pred c-cCCCEEEEEecCCcEEEEEcCCCCccc-cccCCC------------------CeeEEEEC-CCCCEEEEEEcCCceee
Q 014302 245 S-PTGDYFFAAKFDGTFYLWETNTWTSEP-WSSTSG------------------FVTGATWD-PEGRMILLAFAGSLTLG 303 (427)
Q Consensus 245 s-p~g~~l~~~~~dg~v~iwd~~~~~~~~-~~~~~~------------------~v~~v~~s-pdg~~l~~~~~~~~~i~ 303 (427)
+ |+++.|++++.|+.+++||+...+... +..+.. .....+|+ +.+..++++++.++.++
T Consensus 263 ~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~ 342 (393)
T 4gq1_A 263 IGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQ 342 (393)
T ss_dssp ETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEE
T ss_pred ecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEE
Confidence 6 899999999999999999998765421 112221 22233343 34556666677788999
Q ss_pred eeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 304 SIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
+|++...... .....++..|.+|+|+|||++||++ +++ -+.+|.+.
T Consensus 343 lwd~~~~~~~------------~~~~~~~~~V~svafspdG~~LA~a---s~~----Gv~lvrL~ 388 (393)
T 4gq1_A 343 LINTYEKDSN------------SIPIQLGMPIVDFCWHQDGSHLAIA---TEG----SVLLTRLM 388 (393)
T ss_dssp EEETTCTTCC------------EEEEECSSCEEEEEECTTSSEEEEE---ESS----EEEEEEEG
T ss_pred EEECCCCcEE------------EEecCCCCcEEEEEEcCCCCEEEEE---eCC----CeEEEEEe
Confidence 9988765221 1123345589999999999999995 333 27777764
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=1.5e-22 Score=195.74 Aligned_cols=278 Identities=12% Similarity=0.108 Sum_probs=184.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEcc--CCCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRP--NGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp--~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.|++++|+|++ +|++|+.|++|++||+..+ .......+|...|.+++|++ ++..+++++.++.|++|++......
T Consensus 164 ~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 164 GVWALKYAHGG-ILVSGSTDRTVRVWDIKKG--CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp CEEEEEECSTT-EEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred CEEEEEEcCCC-EEEEEeCCCCEEEEECCCC--cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 89999999988 9999999999999999877 45566678999999999995 5533444456699999999732211
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC--------------ce---EEeccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG--------------TP---IRRGFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--------------~~---~~~~~~~v~~ 241 (427)
.......... ...............+..+ ...+.++ +++++++..+ .. +..|...+.+
T Consensus 241 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 315 (464)
T 3v7d_B 241 PDHGEEHDYP--LVFHTPEENPYFVGVLRGH-MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYS 315 (464)
T ss_dssp ------CCSS--EEESCGGGCTTEEEEECCC-SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred ccccccCCcc--eEeeccCCCeEEEEEccCc-cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEE
Confidence 1100000000 0000000011122233333 4445544 3445443322 12 3347789999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccc
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLP 320 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 320 (427)
++|+|++++|++++.||.|++||+++++.. .+..|...|.+++|+ +++|++++ .++.+++|++.+....+
T Consensus 316 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s-~dg~v~vwd~~~~~~~~------ 386 (464)
T 3v7d_B 316 TIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAA-ADGSIRGWDANDYSRKF------ 386 (464)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEE-TTSEEEEEETTTCCEEE------
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEe-CCCcEEEEECCCCceee------
Confidence 999999999999999999999999988774 445899999999998 57888765 45588888877642111
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCC
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFK 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 400 (427)
...+...+..++|+|++++|+++ + | +.|++||+++++++.... ........+++|.
T Consensus 387 -------~~~~~~~~~~~~~~~~~~~l~~~---~-d---g~i~iwd~~~g~~~~~~~------~~~~~~v~~v~~~---- 442 (464)
T 3v7d_B 387 -------SYHHTNLSAITTFYVSDNILVSG---S-E---NQFNIYNLRSGKLVHANI------LKDADQIWSVNFK---- 442 (464)
T ss_dssp -------EEECTTCCCEEEEEECSSEEEEE---E-T---TEEEEEETTTCCEEESCT------TTTCSEEEEEEEE----
T ss_pred -------eecCCCCccEEEEEeCCCEEEEe---c-C---CeEEEEECCCCcEEehhh------ccCCCcEEEEEec----
Confidence 11233467888999999999984 3 3 569999999988763211 1122336678885
Q ss_pred CCceeEEEeeCceEEEEec
Q 014302 401 QGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 401 ~g~~l~v~~~~g~i~~~~~ 419 (427)
...+++.+..+|.+.++-+
T Consensus 443 ~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 443 GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp TTEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEEeCCeEEEEEe
Confidence 3456777767776665544
No 103
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=3.6e-23 Score=198.67 Aligned_cols=195 Identities=16% Similarity=0.131 Sum_probs=143.9
Q ss_pred cCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeE
Q 014302 140 SDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALS 218 (427)
Q Consensus 140 ~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 218 (427)
..|...|++|+|+|....+||+|+ ++.|+|||+... .......+.+| ...|++++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-----------------------~~~~~~~~~gH-~~~V~~l~ 171 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-----------------------DKPTFIKGIGA-GGSITGLK 171 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-----------------------SCCEEECCCSS-SCCCCEEE
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-----------------------CceeEEEccCC-CCCEEEEE
Confidence 457888999999997667888875 599999998711 11222334445 78899999
Q ss_pred eCC-CCCCcccCce----------------EEe---ccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCC
Q 014302 219 WGP-DGRFPGLGTP----------------IRR---GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSG 278 (427)
Q Consensus 219 ~sp-dg~~l~~~~~----------------~~~---~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 278 (427)
|+| +++++.++.. +.. +...+.+++|+|++++|++|+.||.|++||++......+..|..
T Consensus 172 f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~ 251 (435)
T 4e54_B 172 FNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKK 251 (435)
T ss_dssp ECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSS
T ss_pred EeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccc
Confidence 998 6777554321 111 22346789999999999999999999999998766666778999
Q ss_pred CeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcc
Q 014302 279 FVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIY 358 (427)
Q Consensus 279 ~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~ 358 (427)
.|.+++|+|++..++++++.++.+++|++........ ......+...|++++|+|+|++|++ ++.|
T Consensus 252 ~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~---------~~~~~~h~~~v~~~~~spdg~~l~s---~~~D-- 317 (435)
T 4e54_B 252 KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS---------FLYSLPHRHPVNAACFSPDGARLLT---TDQK-- 317 (435)
T ss_dssp CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC---------CSBCCBCSSCEEECCBCTTSSEEEE---EESS--
T ss_pred eEEeeeecCCCceEEEEecCcceeeEEecccccccce---------EEEeeeccccccceeECCCCCeeEE---EcCC--
Confidence 9999999999986555566677888888876421100 0111234458999999999999999 5556
Q ss_pred eeEEEEEEeccCceE
Q 014302 359 KGLIAIYDARRTPLI 373 (427)
Q Consensus 359 ~g~i~vwd~~~~~~~ 373 (427)
|+|+|||+.++.+.
T Consensus 318 -~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 318 -SEIRVYSASQWDCP 331 (435)
T ss_dssp -SCEEEEESSSSSSE
T ss_pred -CEEEEEECCCCccc
Confidence 66999999887654
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.5e-23 Score=195.24 Aligned_cols=233 Identities=12% Similarity=0.108 Sum_probs=160.1
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcC-----CeeEEEEccCCCceEEEe-cCCeEEEEecc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQR-----DVKVLEWRPNGGRSLSVG-CKGGICIWAPS 173 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~-----~v~~l~~sp~~~~~la~g-~~~~i~iw~~~ 173 (427)
..|.+++|||+|++||+++.||+|+||+.+. ...... |.. .|.+++||||| ++||+| .|++|+||++.
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECC
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECC
Confidence 3799999999999999999999999999543 222223 443 59999999999 555555 56999999997
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEE
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFA 253 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~ 253 (427)
. +.. ....+..+..++.+ ..+|...|.+++|+||| +++
T Consensus 160 ~-~~l-----------------~~~~~i~l~ti~~~----------------------~~gh~~~V~sVawSPdg--Laa 197 (588)
T 2j04_A 160 K-NSE-----------------NTPEFYFESSIRLS----------------------DAGSKDWVTHIVWYEDV--LVA 197 (588)
T ss_dssp C-CTT-----------------TCCCCEEEEEEECS----------------------CTTCCCCEEEEEEETTE--EEE
T ss_pred C-Ccc-----------------ccccceeeeeeecc----------------------cccccccEEEEEEcCCc--EEE
Confidence 1 000 00000011111111 12255689999999999 888
Q ss_pred EecCCcEEEEEcCCCCccc----c-ccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC-Cccccccccccccce
Q 014302 254 AKFDGTFYLWETNTWTSEP----W-SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP-SLDAHLLPVDLPDIV 327 (427)
Q Consensus 254 ~~~dg~v~iwd~~~~~~~~----~-~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~ 327 (427)
++.|++|++||+....... + ..|...|.+++|+ |+.|++++ + +.+++|++.+... .+.
T Consensus 198 ss~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~-~tIkLWd~~~~~~~~~~------------ 261 (588)
T 2j04_A 198 ALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-P-GYVHKIDLKNYSISSLK------------ 261 (588)
T ss_dssp EETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-S-SEEEEEETTTTEEEEEE------------
T ss_pred EeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-C-CeEEEEECCCCeEEEEE------------
Confidence 8889999999998877532 3 2677899999999 68888775 3 5888888776522 111
Q ss_pred eeccCCceeEEEE--CCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeee-----------CCCCCC------
Q 014302 328 SLTGSQGIEKIAW--DASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIR-----------GPGDNP------ 388 (427)
Q Consensus 328 ~~~~~~~i~~v~~--sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~-----------~~~~~~------ 388 (427)
..+.+.|.+++| +||+..|++ +.++ |+ +||.... +...|.+.+. ..+...
T Consensus 262 -~gh~~~V~~va~~~s~d~~~La~---a~ed---G~-klw~~d~---~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~ 330 (588)
T 2j04_A 262 -TGSLENFHIIPLNHEKESTILLM---SNKT---SY-KVLLEDE---LHVTADNIIAPYLEKKFKKWSTIWNEFNNYETT 330 (588)
T ss_dssp -CSCCSCCCEEEETTCSSCEEEEE---CSSC---EE-EEEESSS---EEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCE
T ss_pred -cCCCceEEEEEeeeCCCCCEEEE---EcCC---CC-EEEeecc---EEECCCceEEEEcCCEEEEEECCCCceeeeccc
Confidence 124448899999 999999988 6666 88 9999762 3344333111 000111
Q ss_pred -CceeEEeccCCCCCceeEEEee
Q 014302 389 -KPVAFSFHDKFKQGPLLSVCWS 410 (427)
Q Consensus 389 -~~~~~~f~~~~~~g~~l~v~~~ 410 (427)
...+++|.|+ |.++|+++.
T Consensus 331 ~~I~~va~SPd---G~~lA~~~~ 350 (588)
T 2j04_A 331 LVIHGISLSPD---GYSIAIVYD 350 (588)
T ss_dssp EEEEEEEECTT---SSEEEEEEE
T ss_pred eEEEEEEECCC---CCEEEEEEe
Confidence 1456899886 889999876
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.1e-23 Score=186.20 Aligned_cols=222 Identities=16% Similarity=0.143 Sum_probs=164.8
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCC-CcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSG-KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
..|++++|+|++++|++++.|+.+++|++.... .........|...|.+++| ++..+++++.++.+++|+..
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~----- 132 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG----- 132 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-----
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC-----
Confidence 379999999999999999999999999987762 2334455679999999999 34355555667999999944
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC-CCCCcccCc---------------eEEe-ccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRFPGLGT---------------PIRR-GFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~---------------~~~~-~~~~v~~ 241 (427)
.....+..+ ...+.+++|.| +++.+..+. .+.. +...+.+
T Consensus 133 ----------------------~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~ 189 (313)
T 3odt_A 133 ----------------------SLVYNLQAH-NASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRH 189 (313)
T ss_dssp ----------------------EEEEEEECC-SSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEE
T ss_pred ----------------------cEEEecccC-CCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEE
Confidence 233344444 77888888888 777654332 1222 6788999
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccc
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLP 320 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 320 (427)
++|+|++. +++++.|+.|++||+++++.. .+..|...+.+++|+|++. |++++ .++.+++|++.+....
T Consensus 190 ~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~-~dg~v~iwd~~~~~~~------- 259 (313)
T 3odt_A 190 LAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCG-EDRTVRIWSKENGSLK------- 259 (313)
T ss_dssp EEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEE-TTSEEEEECTTTCCEE-------
T ss_pred EEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEe-cCCEEEEEECCCCcee-------
Confidence 99999998 889999999999999988764 4447999999999999994 66554 5558888877664210
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.....+...|.+++|+|+++++ + ++.| |.|++||++++...
T Consensus 260 -----~~~~~~~~~i~~~~~~~~~~~~-~---~~~d---g~i~iw~~~~~~~~ 300 (313)
T 3odt_A 260 -----QVITLPAISIWSVDCMSNGDII-V---GSSD---NLVRIFSQEKSRWA 300 (313)
T ss_dssp -----EEEECSSSCEEEEEECTTSCEE-E---EETT---SCEEEEESCGGGCC
T ss_pred -----EEEeccCceEEEEEEccCCCEE-E---EeCC---CcEEEEeCCCCcee
Confidence 0111233489999999999955 4 3334 56999999887654
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.91 E-value=2.4e-22 Score=192.81 Aligned_cols=255 Identities=10% Similarity=0.139 Sum_probs=177.5
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|.+++| ++++|++|+.|++|++||+.+. .......+|...|.+++| ++..+++++.++.|++|++.
T Consensus 135 ~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~------- 201 (435)
T 1p22_A 135 GVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN------- 201 (435)
T ss_dssp CEEEEEC--CSSEEEEEESSSCEEEEESSSC--CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS-------
T ss_pred cEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC-------
Confidence 5777766 8999999999999999999877 555666789999999999 56344444566999999997
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC--------------------ceEEeccCCeE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG--------------------TPIRRGFGGLS 240 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--------------------~~~~~~~~~v~ 240 (427)
++ .....+..| ...|.+++|+++ .+.++ ..+..|...|.
T Consensus 202 --~~----------------~~~~~~~~h-~~~v~~l~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~ 260 (435)
T 1p22_A 202 --TG----------------EMLNTLIHH-CEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 260 (435)
T ss_dssp --SC----------------CEEEEECCC-CSCEEEEECCTT--EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEE
T ss_pred --CC----------------cEEEEEcCC-CCcEEEEEEcCC--EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEE
Confidence 11 233444444 677888888643 22111 12334778899
Q ss_pred EEEEccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccc
Q 014302 241 ILKWSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
+++| ++++|++++.||.|++||+++++.. .+..|...+.+++| +++++++++ .++.+++|++......
T Consensus 261 ~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~-~dg~i~iwd~~~~~~~------ 329 (435)
T 1p22_A 261 VVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS-SDNTIRLWDIECGACL------ 329 (435)
T ss_dssp EEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEE-TTSCEEEEETTTCCEE------
T ss_pred EEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEe-CCCeEEEEECCCCCEE------
Confidence 9988 7899999999999999999988774 44478899999999 467888765 4558888888764210
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEe----eeeeeeCCCCCCCceeEEe
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLS----LIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~f 395 (427)
.....+...|.+++| ++++|++ ++.| |.|++||+.++...... ....+.+... ...+++|
T Consensus 330 ------~~~~~h~~~v~~~~~--~~~~l~s---g~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~ 393 (435)
T 1p22_A 330 ------RVLEGHEELVRCIRF--DNKRIVS---GAYD---GKIKVWDLVAALDPRAPAGTLCLRTLVEHSG--RVFRLQF 393 (435)
T ss_dssp ------EEECCCSSCEEEEEC--CSSEEEE---EETT---SCEEEEEHHHHTSTTSCTTTTEEEEECCCSS--CCCCEEE
T ss_pred ------EEEeCCcCcEEEEEe--cCCEEEE---EeCC---CcEEEEECCCCCCccccccchheeeccCCCC--CeEEEEe
Confidence 001123447899999 7889988 5555 66999999765410000 0112222222 3557778
Q ss_pred ccCCCCCceeEEEeeCceEEEEeccc
Q 014302 396 HDKFKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 396 ~~~~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
. +..|++|..||.|.+|++.-
T Consensus 394 ~-----~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 394 D-----EFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp C-----SSCEEECCSSSEEEEEC---
T ss_pred C-----CCEEEEEeCCCEEEEEECCC
Confidence 2 55688898999999999753
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=1.8e-22 Score=194.10 Aligned_cols=233 Identities=13% Similarity=0.207 Sum_probs=160.5
Q ss_pred ceeeeEEcCCC--CEEEEEeCCCeEEEEEccCCCCc--------------------------------------ceeecc
Q 014302 101 DLQGVSWHQHK--HIVAFISGSTQVIVRDYEDSGKD--------------------------------------ACILTS 140 (427)
Q Consensus 101 ~V~~l~~sp~g--~~lat~~~d~~v~vwd~~~~~~~--------------------------------------~~~~~~ 140 (427)
.|++++|+|++ .+|++++.|++|+||++...... ......
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 59999999998 79999999999999998763110 012235
Q ss_pred CCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEee-------hhcccCCCc
Q 014302 141 DSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVD-------FLRSQNGEQ 213 (427)
Q Consensus 141 ~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 213 (427)
+|...|.+++|+|++ .+|++|.++.|++|++.. . . .... .+..| ...
T Consensus 175 ~h~~~v~~~~~~~~~-~~l~s~~d~~i~iwd~~~---------~--------------~-~~~~~~~~~~~~~~~~-~~~ 228 (447)
T 3dw8_B 175 AHTYHINSISINSDY-ETYLSADDLRINLWHLEI---------T--------------D-RSFNIVDIKPANMEEL-TEV 228 (447)
T ss_dssp CCSSCCCEEEECTTS-SEEEEECSSEEEEEETTE---------E--------------E-EEEEEEECCCSSGGGC-CCC
T ss_pred CCCcceEEEEEcCCC-CEEEEeCCCeEEEEECCC---------C--------------C-ceeeeeeccccccccc-Ccc
Confidence 799999999999998 677777789999999971 1 0 1111 24444 778
Q ss_pred eeeeEeCCCC-CCcccCc---------------------eEEeccC------------CeEEEEEccCCCEEEEEecCCc
Q 014302 214 ITALSWGPDG-RFPGLGT---------------------PIRRGFG------------GLSILKWSPTGDYFFAAKFDGT 259 (427)
Q Consensus 214 v~~~~~spdg-~~l~~~~---------------------~~~~~~~------------~v~~~~~sp~g~~l~~~~~dg~ 259 (427)
|.+++|+|++ ++++++. .+..|.. .|.+++|+|+|++|++++. +.
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~ 307 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS 307 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce
Confidence 9999999998 6644221 1223333 8999999999999999998 99
Q ss_pred EEEEEcCC-CCcc-ccccCCCC---------------eeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC-Ccccccccc
Q 014302 260 FYLWETNT-WTSE-PWSSTSGF---------------VTGATWDPEGRMILLAFAGSLTLGSIHFASKPP-SLDAHLLPV 321 (427)
Q Consensus 260 v~iwd~~~-~~~~-~~~~~~~~---------------v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 321 (427)
|++||+++ .+.. .+..|... +..++|+|+|++|+++ +.++.+++|++..... .+..+..+.
T Consensus 308 v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~-s~dg~v~iwd~~~~~~~~~~~~~~~~ 386 (447)
T 3dw8_B 308 VKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTG-SYNNFFRMFDRNTKRDITLEASRENN 386 (447)
T ss_dssp EEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEE-CSTTEEEEEETTTCCEEEEECCSTTC
T ss_pred EEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEe-ccCCEEEEEEcCCCcceeeeeccccc
Confidence 99999987 5543 33344321 3349999999999876 5556899998876422 222221111
Q ss_pred ccc-------------------cceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 322 DLP-------------------DIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 322 ~~~-------------------~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
... ....+.....|..++|+|++.+||++ +.+ .+++|..+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~---~~~----~~~~~~~~ 445 (447)
T 3dw8_B 387 KPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVA---TTN----NLYIFQDK 445 (447)
T ss_dssp CTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEE---CSS----CEEEEECC
T ss_pred ccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEE---ecc----eeeeeccc
Confidence 000 00112234578999999999999994 332 28898754
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.6e-22 Score=188.20 Aligned_cols=208 Identities=18% Similarity=0.262 Sum_probs=151.5
Q ss_pred ceeeeEEcCC--CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEecCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~--g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g~~~~i~iw~~~~~~ 176 (427)
.|++++|+|+ +++|++++.|+.|+|||+.............|...|.+++|+|+ +..+++++.++.|++|++....
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 7999999987 89999999999999999998732255556678999999999999 7445555566999999997110
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc----------
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP---------- 246 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp---------- 246 (427)
. .... .+..|...+.+++|+|
T Consensus 137 ~-----------------------~~~~--------------------------~~~~~~~~v~~~~~~~~~~~~~~~~~ 167 (379)
T 3jrp_A 137 T-----------------------TSPI--------------------------IIDAHAIGVNSASWAPATIEEDGEHN 167 (379)
T ss_dssp C-----------------------CCEE--------------------------EEECCTTCEEEEEECCCC--------
T ss_pred c-----------------------eeeE--------------------------EecCCCCceEEEEEcCcccccccccc
Confidence 0 0011 1222444555555655
Q ss_pred ---CCCEEEEEecCCcEEEEEcCCCCcc-----ccccCCCCeeEEEECCC---CCEEEEEEcCCceeeeeeeCCCCCCcc
Q 014302 247 ---TGDYFFAAKFDGTFYLWETNTWTSE-----PWSSTSGFVTGATWDPE---GRMILLAFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 247 ---~g~~l~~~~~dg~v~iwd~~~~~~~-----~~~~~~~~v~~v~~spd---g~~l~~~~~~~~~i~~~~~~~~~~~~~ 315 (427)
++++|++++.|+.|++||+++.... .+..|...|.+++|+|+ +++|++++ .++.+++|++........
T Consensus 168 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~ 246 (379)
T 3jrp_A 168 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPWK 246 (379)
T ss_dssp --CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-TTSCEEEEEESSTTSCCE
T ss_pred CCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe-CCCEEEEEeCCCCCccce
Confidence 7999999999999999999877642 23378999999999999 78888765 555888888876421111
Q ss_pred ccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
... .....+...|.+++|+|+|++|+++ +.| |.|++|++....
T Consensus 247 ~~~-------~~~~~~~~~v~~~~~s~~g~~l~~~---~~d---g~i~iw~~~~~~ 289 (379)
T 3jrp_A 247 KTL-------LKEEKFPDVLWRASWSLSGNVLALS---GGD---NKVTLWKENLEG 289 (379)
T ss_dssp EEE-------SSSSCCSSCEEEEEECSSSCCEEEE---ESS---SSEEEEEEEETT
T ss_pred eee-------eccccCCCcEEEEEEcCCCCEEEEe---cCC---CcEEEEeCCCCC
Confidence 000 1111244589999999999999984 445 569999998543
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=1.5e-21 Score=184.38 Aligned_cols=252 Identities=14% Similarity=0.102 Sum_probs=181.6
Q ss_pred CEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCccccccCcccccc
Q 014302 112 HIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAASVRSGAASFLG 190 (427)
Q Consensus 112 ~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~~~~~~~~~~~~ 190 (427)
.++++++.|+.|++||+..+ +.......| ..+.+++|+|++..+++++ .++.|++||+. ++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~--~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~---------~~------ 64 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN--KVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTA---------TN------ 64 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT--EEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETT---------TT------
T ss_pred EEEEEcCCCCEEEEEECCCC--eEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECC---------CC------
Confidence 46788889999999999876 343333444 4689999999996665666 56999999987 11
Q ss_pred cccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc-cC--------------ceE--EeccCCeEEEEEccCCCEEE-
Q 014302 191 ALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG-LG--------------TPI--RRGFGGLSILKWSPTGDYFF- 252 (427)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-~~--------------~~~--~~~~~~v~~~~~sp~g~~l~- 252 (427)
.....+..+ ..+.+++|+|+|+++. .+ ..+ ..+...+.+++|+|++++|+
T Consensus 65 ----------~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 65 ----------NVIATVPAG--SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYV 132 (391)
T ss_dssp ----------EEEEEEECS--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEE
T ss_pred ----------eEEEEEECC--CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEE
Confidence 233334433 3889999999998643 11 111 12345789999999999884
Q ss_pred EEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccC
Q 014302 253 AAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGS 332 (427)
Q Consensus 253 ~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (427)
+++.++.|++||+.+++..........+..++|+|+|++|++++..++.+++|++..... ...+.+.
T Consensus 133 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-------------~~~~~~~ 199 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV-------------IDTVKVE 199 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-------------EEEEECS
T ss_pred EeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE-------------EEEEecC
Confidence 888899999999998877555555567899999999999977777777898888765411 1122234
Q ss_pred CceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCcee-EEEeeC
Q 014302 333 QGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLL-SVCWSS 411 (427)
Q Consensus 333 ~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l-~v~~~~ 411 (427)
..+.+++|+|+|++|+++..+..+ +.|++||++++..+...+ .. ..+.+++|.|+ |..| +.+..+
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~---~~v~~~d~~~~~~~~~~~-----~~---~~~~~~~~s~d---g~~l~~s~~~d 265 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYF---NTVSMIDTGTNKITARIP-----VG---PDPAGIAVTPD---GKKVYVALSFX 265 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSC---CEEEEEETTTTEEEEEEE-----CC---SSEEEEEECTT---SSEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEecCcCC---CcEEEEECCCCeEEEEEe-----cC---CCccEEEEccC---CCEEEEEcCCC
Confidence 478999999999999986432234 679999999887653322 21 13568899886 5544 566779
Q ss_pred ceEEEEecc
Q 014302 412 GFCCTYPLI 420 (427)
Q Consensus 412 g~i~~~~~~ 420 (427)
+.|.+|++-
T Consensus 266 ~~v~v~d~~ 274 (391)
T 1l0q_A 266 NTVSVIDTA 274 (391)
T ss_dssp TEEEEEETT
T ss_pred CEEEEEECC
Confidence 999999864
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.90 E-value=2.4e-22 Score=190.20 Aligned_cols=250 Identities=13% Similarity=0.096 Sum_probs=157.4
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCc---ceeeccCCcCCeeEEEEcc--------CCCceEEEe-cCCeEE
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKD---ACILTSDSQRDVKVLEWRP--------NGGRSLSVG-CKGGIC 168 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~---~~~~~~~~~~~v~~l~~sp--------~~~~~la~g-~~~~i~ 168 (427)
.+....+++++.+||+++.|++|+|||...+... ......+|...|++++|+| |+ ++||++ .|++|+
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~ 169 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLI 169 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEE
Confidence 3455566778889999999999999999877221 1223567999999999998 66 677766 459999
Q ss_pred EEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCC
Q 014302 169 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTG 248 (427)
Q Consensus 169 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g 248 (427)
|||+. .+ .... .+..|...+.+++|+|++
T Consensus 170 ~Wd~~---------~~----------------~~~~--------------------------~~~~~~~~v~~v~~~p~~ 198 (393)
T 4gq1_A 170 IWRLT---------DE----------------GPIL--------------------------AGYPLSSPGISVQFRPSN 198 (393)
T ss_dssp EEEEE---------TT----------------EEEE--------------------------EEEECSSCEEEEEEETTE
T ss_pred EEECC---------CC----------------ceee--------------------------eecCCCCCcEEEEECCCC
Confidence 99986 11 1111 233466788999999988
Q ss_pred C-EEEEEecCCcEEEEEcCCCCccc--------------------------cccCCCCeeEEEEC-CCCCEEEEEEcCCc
Q 014302 249 D-YFFAAKFDGTFYLWETNTWTSEP--------------------------WSSTSGFVTGATWD-PEGRMILLAFAGSL 300 (427)
Q Consensus 249 ~-~l~~~~~dg~v~iwd~~~~~~~~--------------------------~~~~~~~v~~v~~s-pdg~~l~~~~~~~~ 300 (427)
. +|++++.|++|++||+++++... ...|...+.++.|+ |||+.|+++ ..++
T Consensus 199 ~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~-s~d~ 277 (393)
T 4gq1_A 199 PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAM-CKSG 277 (393)
T ss_dssp EEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEE-CTTS
T ss_pred CceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEE-eCCC
Confidence 5 68899999999999998765311 11466778889986 899999876 4555
Q ss_pred eeeeeeeCCCCC--Cccccccccc----cccceeeccCC-ceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 301 TLGSIHFASKPP--SLDAHLLPVD----LPDIVSLTGSQ-GIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 301 ~i~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~-~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.+++|++..... .+..+...+. .+......... .+..+.+.+.+.+++++ ++.| |+|+|||+.++...
T Consensus 278 ~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--gs~D---g~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 278 AWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA--HSQH---GLIQLINTYEKDSN 352 (393)
T ss_dssp EEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE--ETTT---TEEEEEETTCTTCC
T ss_pred CEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE--ECCC---CEEEEEECCCCcEE
Confidence 888888765421 2222221110 11111222222 23334444445555554 7777 77999999987765
Q ss_pred EEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 374 SLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
... . +.. ....+++|+|+ |..||++.. +.+.+|.+
T Consensus 353 ~~~-~----~~~--~~V~svafspd---G~~LA~as~-~Gv~lvrL 387 (393)
T 4gq1_A 353 SIP-I----QLG--MPIVDFCWHQD---GSHLAIATE-GSVLLTRL 387 (393)
T ss_dssp EEE-E----ECS--SCEEEEEECTT---SSEEEEEES-SEEEEEEE
T ss_pred EEe-c----CCC--CcEEEEEEcCC---CCEEEEEeC-CCeEEEEE
Confidence 322 1 111 23668999996 889999955 55666653
No 111
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.90 E-value=6.9e-22 Score=182.89 Aligned_cols=238 Identities=10% Similarity=0.064 Sum_probs=167.3
Q ss_pred ceeeeEEcCCCC-EEEEEeCCCeEEEEEc-cCCCCcceeeccC--CcCCeeEEEEccCCCceEEEecCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKH-IVAFISGSTQVIVRDY-EDSGKDACILTSD--SQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~-~lat~~~d~~v~vwd~-~~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~ 176 (427)
.|++++|+|+++ +|++++.|+.|++|++ ... ....... |...|.+++|+| +..+++++.++.|++|++.
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~---~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~--- 130 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP---SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPR--- 130 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTSCEEEECSSSSS---SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHH---
T ss_pred ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC---ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEccc---
Confidence 799999999999 9999999999999999 766 3345556 999999999999 7455555667999999986
Q ss_pred CccccccCcccccccccCCCCcc---eeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEE
Q 014302 177 NAASVRSGAASFLGALSRGPGTR---WTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFA 253 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~ 253 (427)
.. ..... ..++. .+. +...+.+++|+|++ |++
T Consensus 131 ------~~----------~~~~~~~~~~~~~--------------------------~~~-~~~~v~~~~~~~~~--l~~ 165 (342)
T 1yfq_A 131 ------NY----------GDGVIAVKNLNSN--------------------------NTK-VKNKIFTMDTNSSR--LIV 165 (342)
T ss_dssp ------HH----------TTBCEEEEESCSS--------------------------SSS-SCCCEEEEEECSSE--EEE
T ss_pred ------cc----------ccccccccCCeee--------------------------EEe-eCCceEEEEecCCc--EEE
Confidence 10 00000 00000 111 45678899999887 889
Q ss_pred EecCCcEEEEEcCC-CCcc---ccccCCCCeeEEEECC-CCCEEEEEEcCCceeeeeeeCCC------CC--Cccccccc
Q 014302 254 AKFDGTFYLWETNT-WTSE---PWSSTSGFVTGATWDP-EGRMILLAFAGSLTLGSIHFASK------PP--SLDAHLLP 320 (427)
Q Consensus 254 ~~~dg~v~iwd~~~-~~~~---~~~~~~~~v~~v~~sp-dg~~l~~~~~~~~~i~~~~~~~~------~~--~~~~~~~~ 320 (427)
++.|+.|++||+++ .... ....+...+.+++|+| +++++++++. ++.+.+|++... .. .+..|...
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 244 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECCCCC
T ss_pred EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec-CCcEEEEEEcCCCcccccccceeeeccccc
Confidence 99999999999998 5542 2236788999999999 9999998765 558888877654 11 11111110
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCC
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFK 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 400 (427)
. ....+...|.+++|+|++++|++ ++.| |.|++||+.++..+.. +.+.. .....+++ |
T Consensus 245 ~-----~~~~~~~~i~~~~~s~~~~~l~~---~~~d---g~i~vwd~~~~~~~~~-----~~~~h-~~~v~~~~--~--- 302 (342)
T 1yfq_A 245 L-----KDTNLAYPVNSIEFSPRHKFLYT---AGSD---GIISCWNLQTRKKIKN-----FAKFN-EDSVVKIA--C--- 302 (342)
T ss_dssp T-----TCCSSCCCEEEEEECTTTCCEEE---EETT---SCEEEEETTTTEEEEE-----CCCCS-SSEEEEEE--E---
T ss_pred c-----cccccceeEEEEEEcCCCCEEEE---ecCC---ceEEEEcCccHhHhhh-----hhccc-CCCceEec--C---
Confidence 0 00112348999999999999998 4555 6699999998876522 22220 22244565 4
Q ss_pred CCceeEEEeeCce
Q 014302 401 QGPLLSVCWSSGF 413 (427)
Q Consensus 401 ~g~~l~v~~~~g~ 413 (427)
++..|++|..||.
T Consensus 303 ~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 303 SDNILCLATSDDT 315 (342)
T ss_dssp CSSEEEEEEECTH
T ss_pred CCCeEEEEecCCc
Confidence 4778999999998
No 112
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.90 E-value=1.8e-21 Score=187.37 Aligned_cols=258 Identities=12% Similarity=0.181 Sum_probs=182.8
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|.+++|+ +++|++|+.|++|++||+..+ .......+|...|.+++|+++ .+++++.++.|++|++.
T Consensus 161 ~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~~~--~l~s~s~dg~i~~wd~~------- 227 (445)
T 2ovr_B 161 GVWSSQMR--DNIIISGSTDRTLKVWNAETG--ECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIE------- 227 (445)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEEETT--EEEEEETTSEEEEEESS-------
T ss_pred CEEEEEec--CCEEEEEeCCCeEEEEECCcC--cEEEEECCCCCcEEEEEecCC--EEEEEeCCCEEEEEECC-------
Confidence 78888887 568999999999999998876 455556678888999998632 45555567889999987
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc-----------------eEEeccCCeEEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-----------------PIRRGFGGLSILK 243 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-----------------~~~~~~~~v~~~~ 243 (427)
++ .....+..+ ...+.+++| ++++++.+. .+..|...+.+++
T Consensus 228 --~~----------------~~~~~~~~~-~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 286 (445)
T 2ovr_B 228 --TG----------------QCLHVLMGH-VAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 286 (445)
T ss_dssp --SC----------------CEEEEEECC-SSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE
T ss_pred --CC----------------cEEEEEcCC-cccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEE
Confidence 11 233444454 777888888 555544221 1334778899999
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Cccccccc
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHLLP 320 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~~~ 320 (427)
| ++.+|++++.|+.|++||+++++.. .+..|...+.++.++ ++++++++ .++.+.+|++.+... .+.++
T Consensus 287 ~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~--- 358 (445)
T 2ovr_B 287 F--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN-ADSTVKIWDIKTGQCLQTLQGP--- 358 (445)
T ss_dssp E--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEE-TTSCEEEEETTTCCEEEEECST---
T ss_pred E--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEe-CCCeEEEEECCCCcEEEEEccC---
Confidence 8 8899999999999999999988874 344788888888774 67887765 455888888765421 11110
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCC
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFK 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 400 (427)
..+...|.+++|+ +++|++ ++.| |.|++||+.+++.+..... ...........+++|.|+
T Consensus 359 --------~~~~~~v~~~~~~--~~~l~s---~~~d---g~v~iwd~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~-- 418 (445)
T 2ovr_B 359 --------NKHQSAVTCLQFN--KNFVIT---SSDD---GTVKLWDLKTGEFIRNLVT--LESGGSGGVVWRIRASNT-- 418 (445)
T ss_dssp --------TSCSSCEEEEEEC--SSEEEE---EETT---SEEEEEETTTCCEEEEEEE--CTTGGGTCEEEEEEECSS--
T ss_pred --------CCCCCCEEEEEEC--CCEEEE---EeCC---CeEEEEECCCCceeeeeec--cccCCCCceEEEEEecCC--
Confidence 0134579999996 578888 5556 7799999999876533210 011112233668899885
Q ss_pred CCceeEEEeeCce----EEEEeccc
Q 014302 401 QGPLLSVCWSSGF----CCTYPLIF 421 (427)
Q Consensus 401 ~g~~l~v~~~~g~----i~~~~~~~ 421 (427)
+.+|++|..||. |.+|+|--
T Consensus 419 -~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 419 -KLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp -EEEEEEECSSSSSCCEEEEEECCC
T ss_pred -EEEEEEcccCCCCccEEEEEECCC
Confidence 789999999997 99998854
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=7.8e-22 Score=189.00 Aligned_cols=216 Identities=12% Similarity=0.203 Sum_probs=153.1
Q ss_pred ceeeeEEcCCCC-EEEEEeCCCeEEEEEccCCCCc-----ceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEecc
Q 014302 101 DLQGVSWHQHKH-IVAFISGSTQVIVRDYEDSGKD-----ACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPS 173 (427)
Q Consensus 101 ~V~~l~~sp~g~-~lat~~~d~~v~vwd~~~~~~~-----~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~ 173 (427)
.|++++|+|++. +|++|+.||+|+||++...... .......|...|.+++|+|++..+|+++ .++.|++||+.
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 799999999998 9999999999999999874221 1234457899999999999665777766 45999999997
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCC-EEE
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGD-YFF 252 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~-~l~ 252 (427)
.... .. ....+..|...+.+++|+|+++ +|+
T Consensus 263 ~~~~---------------------------------~~---------------~~~~~~~~~~~v~~i~~~p~~~~~l~ 294 (430)
T 2xyi_A 263 NNNT---------------------------------SK---------------PSHTVDAHTAEVNCLSFNPYSEFILA 294 (430)
T ss_dssp CSCS---------------------------------SS---------------CSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred CCCC---------------------------------Cc---------------ceeEeecCCCCeEEEEeCCCCCCEEE
Confidence 1000 00 0112345677899999999998 577
Q ss_pred EEecCCcEEEEEcCCCCc--cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccc-ccccccccee-
Q 014302 253 AAKFDGTFYLWETNTWTS--EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHL-LPVDLPDIVS- 328 (427)
Q Consensus 253 ~~~~dg~v~iwd~~~~~~--~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~- 328 (427)
+++.||.|++||+++... ..+..|...|.+++|+|+++.++++++.++.+.+|++........... ..........
T Consensus 295 tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 374 (430)
T 2xyi_A 295 TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH 374 (430)
T ss_dssp EEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC
T ss_pred EEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEc
Confidence 999999999999998543 334478999999999999975444555666899998876321100000 0000000111
Q ss_pred eccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEEEeccC
Q 014302 329 LTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 329 ~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
..+...|.+++|+|+++ +|++ ++.| +.|+||++...
T Consensus 375 ~~h~~~v~~~~~~p~~~~~l~s---~s~d---g~i~iw~~~~~ 411 (430)
T 2xyi_A 375 GGHTAKISDFSWNPNEPWIICS---VSED---NIMQVWQMAEN 411 (430)
T ss_dssp CCCSSCEEEEEECSSSTTEEEE---EETT---SEEEEEEECHH
T ss_pred CCCCCCceEEEECCCCCCEEEE---EECC---CCEEEeEcccc
Confidence 12445799999999999 6666 4555 67999999764
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=8.7e-22 Score=180.18 Aligned_cols=219 Identities=17% Similarity=0.302 Sum_probs=165.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~ 179 (427)
.|++++|+|++++||+|+.|++|+||++..+ +......+|...+.++++ ++ .++++++ ++.+++|+....
T Consensus 69 ~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--~~~~~~~~h~~~~~~~~~--~~-~~l~s~~~~~~~~~~~~~~~---- 139 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRLRNMTSHSARVGSLSW--NS-YILSSGSRSGHIHHHDVRVA---- 139 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTSS----
T ss_pred eEEEEEECCCCCEEEEEECCCcEEEeecCCc--eeEEEecCccceEEEeec--CC-CEEEEEecCCceEeeecCCC----
Confidence 6999999999999999999999999999887 555666778887776655 45 4666665 488888987611
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc---------------------eEEeccCC
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT---------------------PIRRGFGG 238 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~---------------------~~~~~~~~ 238 (427)
...+..+..| ...+..+.|+++++++.++. ....+.+.
T Consensus 140 --------------------~~~~~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 198 (318)
T 4ggc_A 140 --------------------EHHVATLSGH-SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 198 (318)
T ss_dssp --------------------SCEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC
T ss_pred --------------------ceeEEEEcCc-cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCc
Confidence 1223334444 67788888888888754321 12225577
Q ss_pred eEEEEEccCCCEEE---EEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEc-CCceeeeeeeCCCCC--
Q 014302 239 LSILKWSPTGDYFF---AAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA-GSLTLGSIHFASKPP-- 312 (427)
Q Consensus 239 v~~~~~sp~g~~l~---~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~-~~~~i~~~~~~~~~~-- 312 (427)
+..++++|++..++ +++.++.|++||.+.........+...+..++|+|++..+++++. .++.+++|++.+...
T Consensus 199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~ 278 (318)
T 4ggc_A 199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA 278 (318)
T ss_dssp EEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE
T ss_pred eEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE
Confidence 89999999887544 567789999999998887766778889999999999999887653 567899998876421
Q ss_pred CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 313 SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
.+.+ |.+.|++|+|+|||++||+ ++.| |+|+|||+..
T Consensus 279 ~l~g--------------H~~~V~~l~~spdg~~l~S---~s~D---~~v~iWd~~~ 315 (318)
T 4ggc_A 279 ELKG--------------HTSRVLSLTMSPDGATVAS---AAAD---ETLRLWRCFE 315 (318)
T ss_dssp EECC--------------CSSCEEEEEECTTSSCEEE---EETT---TEEEEECCSC
T ss_pred EEcC--------------CCCCEEEEEEcCCCCEEEE---EecC---CeEEEEECCC
Confidence 2222 3458999999999999999 6666 7799999864
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.89 E-value=8.9e-22 Score=186.45 Aligned_cols=261 Identities=12% Similarity=0.069 Sum_probs=155.7
Q ss_pred CceeeeEEcC-CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCC--ceEEEe-cCCeEEEEeccCC
Q 014302 100 VDLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGG--RSLSVG-CKGGICIWAPSYP 175 (427)
Q Consensus 100 ~~V~~l~~sp-~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~--~~la~g-~~~~i~iw~~~~~ 175 (427)
..|++++|+| ++.+|++++.|+.|++||+... .. .....+...+.++.|+|.+. .+++++ .++.|++|++.
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-- 174 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--QT-ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK-- 174 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--EE-EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS--
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--cc-ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC--
Confidence 3899999999 7779999999999999999876 22 23334677899999999653 255554 56999999997
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCC-cccCce-----------------------
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRF-PGLGTP----------------------- 231 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~----------------------- 231 (427)
.+ .....+..+ ...|.+++|+|+++. ++++..
T Consensus 175 -------~~----------------~~~~~~~~~-~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 230 (408)
T 4a11_B 175 -------SG----------------SCSHILQGH-RQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHN 230 (408)
T ss_dssp -------SS----------------CCCEEECCC-CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTT
T ss_pred -------Cc----------------ceeeeecCC-CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccc
Confidence 11 223334444 778999999999985 432210
Q ss_pred ----------EEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc------cCCCCeeEEEECCCCCEEEEE
Q 014302 232 ----------IRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS------STSGFVTGATWDPEGRMILLA 295 (427)
Q Consensus 232 ----------~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~------~~~~~v~~v~~spdg~~l~~~ 295 (427)
...|...|.+++|+|++++|++++.|+.|++||+++++..... .....+........+..++++
T Consensus 231 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
T 4a11_B 231 GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV 310 (408)
T ss_dssp TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE
T ss_pred cccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE
Confidence 0346678999999999999999999999999999987753221 111112222222334445555
Q ss_pred EcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEE
Q 014302 296 FAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISL 375 (427)
Q Consensus 296 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~ 375 (427)
+. ++.+.+|++...... .....+.+.|.+++|+|++++|++ ++.| |.|++||+.+.+.+..
T Consensus 311 ~~-~~~i~v~d~~~~~~~------------~~~~~~~~~v~~~~~s~~~~~l~s---~~~d---g~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 311 PY-GSTIAVYTVYSGEQI------------TMLKGHYKTVDCCVFQSNFQELYS---GSRD---CNILAWVPSLYEPVPD 371 (408)
T ss_dssp EE-TTEEEEEETTTCCEE------------EEECCCSSCEEEEEEETTTTEEEE---EETT---SCEEEEEECC------
T ss_pred ec-CCEEEEEECcCCcce------------eeeccCCCeEEEEEEcCCCCEEEE---ECCC---CeEEEEeCCCCCccCC
Confidence 44 458888887664210 011124458999999999999998 5556 6699999998765522
Q ss_pred eeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 376 SLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
.... .....+.+. ....++.+..+|.+.+|+..
T Consensus 372 ~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 372 DDET----------TTKSQLNPA--FEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp ---------------------------------------------
T ss_pred CCce----------Eeccccccc--cceeecccCccCceeecCCc
Confidence 1110 011122222 23345566688999998765
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=5.9e-21 Score=180.24 Aligned_cols=228 Identities=14% Similarity=0.113 Sum_probs=167.3
Q ss_pred ceeeeEEcCCCCEE-EEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIV-AFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~l-at~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~ 178 (427)
.+.+++|+|+|++| ++++.|++|++||+..+ +....... ...+.+++|+|+++.+++++.+ +.|++||+.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--~~~~~~~~-~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~----- 104 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATN--NVIATVPA-GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT----- 104 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETT-----
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCC--eEEEEEEC-CCCccceEECCCCCEEEEEECCCCEEEEEECC-----
Confidence 58999999999976 66778999999999876 33333333 3389999999999666666655 899999997
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc-cC--------------ceEE--eccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG-LG--------------TPIR--RGFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-~~--------------~~~~--~~~~~v~~ 241 (427)
++ .....+.. ...+.+++|+|+|+.+. .+ ..+. .....+..
T Consensus 105 ----~~----------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 162 (391)
T 1l0q_A 105 ----SN----------------TVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKG 162 (391)
T ss_dssp ----TT----------------EEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEE
T ss_pred ----CC----------------eEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcce
Confidence 11 22232332 44678999999998642 11 1111 12356789
Q ss_pred EEEccCCCEEE-EEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEc--CCceeeeeeeCCCCCCccccc
Q 014302 242 LKWSPTGDYFF-AAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA--GSLTLGSIHFASKPPSLDAHL 318 (427)
Q Consensus 242 ~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~--~~~~i~~~~~~~~~~~~~~~~ 318 (427)
++|+|++++|+ +++.++.|++||+++++......+...+.+++|+|+|++|++++. .++.+++|++.....
T Consensus 163 ~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~------ 236 (391)
T 1l0q_A 163 IAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI------ 236 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE------
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE------
Confidence 99999999885 777899999999998877666667778999999999999998875 556888888765311
Q ss_pred cccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEe
Q 014302 319 LPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLS 376 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~ 376 (427)
...+..+..+.+++|+|+|++|+++ ++.+ +.|++||+.+++++...
T Consensus 237 -------~~~~~~~~~~~~~~~s~dg~~l~~s--~~~d---~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 237 -------TARIPVGPDPAGIAVTPDGKKVYVA--LSFX---NTVSVIDTATNTITATM 282 (391)
T ss_dssp -------EEEEECCSSEEEEEECTTSSEEEEE--ETTT---TEEEEEETTTTEEEEEE
T ss_pred -------EEEEecCCCccEEEEccCCCEEEEE--cCCC---CEEEEEECCCCcEEEEE
Confidence 1122233467899999999999664 4555 67999999988776544
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.89 E-value=1.3e-21 Score=180.86 Aligned_cols=228 Identities=14% Similarity=0.251 Sum_probs=156.0
Q ss_pred ceeeeEEcC--CCCEEEEEeCCCeEEEEEccCCCC-------cceeeccCCcCCeeEEEEccC--CCceEEEecCCeEEE
Q 014302 101 DLQGVSWHQ--HKHIVAFISGSTQVIVRDYEDSGK-------DACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICI 169 (427)
Q Consensus 101 ~V~~l~~sp--~g~~lat~~~d~~v~vwd~~~~~~-------~~~~~~~~~~~~v~~l~~sp~--~~~~la~g~~~~i~i 169 (427)
.|++++|+| ++++|++++.|++|+|||+..... ........|...|.+++|+|+ +..+++++.++.|++
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~i 138 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRL 138 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEE
T ss_pred cEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEE
Confidence 799999999 699999999999999999987621 234455679999999999999 844555556799999
Q ss_pred EeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC--
Q 014302 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT-- 247 (427)
Q Consensus 170 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~-- 247 (427)
||+..... ...+.. ...+..+.+.+ ..+...+.+++|+|+
T Consensus 139 wd~~~~~~-------------------------~~~~~~--~~~~~~~~~~~-----------~~~~~~~~~~~~~p~~~ 180 (351)
T 3f3f_A 139 YDALEPSD-------------------------LRSWTL--TSEMKVLSIPP-----------ANHLQSDFCLSWCPSRF 180 (351)
T ss_dssp EECSSTTC-------------------------TTCCEE--EEEEESCSCCC-----------SSCSCCCEEEEECCCSS
T ss_pred ecCCChHH-------------------------hccccc--ccccccccccc-----------CCcccceeEEEeccCCC
Confidence 99872111 000000 00111111111 125567899999997
Q ss_pred -CCEEEEEecCCcEEEEEcCCCCc---cccccCCCCeeEEEECCCC----CEEEEEEcCCceeeeeeeCCCCCCccccc-
Q 014302 248 -GDYFFAAKFDGTFYLWETNTWTS---EPWSSTSGFVTGATWDPEG----RMILLAFAGSLTLGSIHFASKPPSLDAHL- 318 (427)
Q Consensus 248 -g~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~v~~v~~spdg----~~l~~~~~~~~~i~~~~~~~~~~~~~~~~- 318 (427)
+.+|++++.++.+.+|+....+. ..+..|...|.+++|+|++ ++|+++ +.++.+++|++...........
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~ 259 (351)
T 3f3f_A 181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG-CKDGRIRIFKITEKLSPLASEES 259 (351)
T ss_dssp SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE-ETTSCEEEEEEEECC--------
T ss_pred CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEE-cCCCeEEEEeCCCCcCccccCCc
Confidence 89999999999998888776664 2334789999999999998 677765 5556899998876321110000
Q ss_pred -----------------------------cccc---cccceee-ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEE
Q 014302 319 -----------------------------LPVD---LPDIVSL-TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIY 365 (427)
Q Consensus 319 -----------------------------~~~~---~~~~~~~-~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vw 365 (427)
.... ......+ .+.+.|++++|+|++++||+ ++.| |.|+||
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s---~~~d---g~v~iw 333 (351)
T 3f3f_A 260 LTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSS---AGDD---GKVRLW 333 (351)
T ss_dssp -------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEE---EETT---SCEEEE
T ss_pred ccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEE---ecCC---CcEEEE
Confidence 0000 0011112 24568999999999999999 5556 669999
Q ss_pred EeccCceE
Q 014302 366 DARRTPLI 373 (427)
Q Consensus 366 d~~~~~~~ 373 (427)
++.++..+
T Consensus 334 ~~~~~~~~ 341 (351)
T 3f3f_A 334 KATYSNEF 341 (351)
T ss_dssp EECTTSCE
T ss_pred ecCcCcch
Confidence 99887644
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=4.8e-21 Score=172.59 Aligned_cols=263 Identities=13% Similarity=0.052 Sum_probs=163.7
Q ss_pred ceeeeEEcCCCC---EEEEEeCCCeEEEEEccCC-CCcceeeccCCcCCeeEEEEccCCCc-------------------
Q 014302 101 DLQGVSWHQHKH---IVAFISGSTQVIVRDYEDS-GKDACILTSDSQRDVKVLEWRPNGGR------------------- 157 (427)
Q Consensus 101 ~V~~l~~sp~g~---~lat~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~v~~l~~sp~~~~------------------- 157 (427)
+|.++-|-..|- .+++++ ..+|++|+.... ..+.....+.|..+|..+.+.||...
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 778888866553 566665 569999998876 22334444455555555555544333
Q ss_pred ---------eEEEecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeeh-hcccCCCceeeeEeCCCCCCcc
Q 014302 158 ---------SLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDF-LRSQNGEQITALSWGPDGRFPG 227 (427)
Q Consensus 158 ---------~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~spdg~~l~ 227 (427)
.+++++ ..+.+|.+. .+ +.+.. ..+| ...|..++++|+|+.+.
T Consensus 120 spd~~~~~~~l~s~g-~~~~v~~l~---------~g----------------~lv~ss~~g~-d~~V~~~~~s~dG~~~~ 172 (356)
T 2w18_A 120 SSDDESEKQVLLKSG-NIKAVLGLT---------KR----------------RLVSSSGTLS-DQQVEVMTFAEDGGGKE 172 (356)
T ss_dssp ------CCEEEEEEE-EEEEEEEET---------TT----------------EEEEEESSST-TCEEEEEEECTTSCEEE
T ss_pred CCCccccccEEEeCC-CeEEEEecC---------CC----------------cEEEecccCC-CCcEEEEEECCCCceee
Confidence 333332 224455553 11 22222 2333 88899999999998776
Q ss_pred cCceEEeccCCeEEEEEcc---CCCEEEEEecCCcEEEEEcCCCCccccc-cC---CCCeeEEEECCCCCEEEEEE----
Q 014302 228 LGTPIRRGFGGLSILKWSP---TGDYFFAAKFDGTFYLWETNTWTSEPWS-ST---SGFVTGATWDPEGRMILLAF---- 296 (427)
Q Consensus 228 ~~~~~~~~~~~v~~~~~sp---~g~~l~~~~~dg~v~iwd~~~~~~~~~~-~~---~~~v~~v~~spdg~~l~~~~---- 296 (427)
.+..|...++.++|+| ++.+|++++.|++|+|||++++++.... .| ...+.+++|+|+|+++++++
T Consensus 173 ---s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 173 ---NQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA 249 (356)
T ss_dssp ---EEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----
T ss_pred ---eeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC
Confidence 5667888999999999 7799999999999999999999874433 33 34577789999999886433
Q ss_pred -------cCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 297 -------AGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 297 -------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
+.+.+++.|+...... + ....+.++. .+.+.+.+..+ ++.++|+ ++.| ++|+|||+++
T Consensus 250 ~w~laSGs~D~tIklWd~~tgk~-l--~v~~~~~p~----Gh~~~~lsg~~--sg~~lAS---gS~D---gTIkIWDl~t 314 (356)
T 2w18_A 250 KESESLRSPVFQLIVINPKTTLS-V--GVMLYCLPP----GQAGRFLEGDV--KDHCAAA---ILTS---GTIAIWDLLL 314 (356)
T ss_dssp --------CCEEEEEEETTTTEE-E--EEEEECCCT----TCCCCEEEEEE--ETTEEEE---EETT---SCEEEEETTT
T ss_pred cceeeccCCCcEEEEEECCCCEE-E--EEEEeeccC----CCcceeEcccc--CCCEEEE---EcCC---CcEEEEECCC
Confidence 3444565555443210 0 000000000 01112223333 3667777 5666 6799999999
Q ss_pred CceEEEeeeeeeeCCCCCCCce-eEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 370 TPLISLSLIGFIRGPGDNPKPV-AFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~-~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
++++.. +.+.... ++ +++|.|+ |..|+.|..|++|.+|++
T Consensus 315 Gk~l~t-----L~gH~~~--vvs~vafSPD---G~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 315 GQCTAL-----LPPVSDQ--HWSFVKWSGT---DSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSEEEE-----ECCC--C--CCCEEEECSS---SSEEEEECTTSCEEEEEE
T ss_pred CcEEEE-----ecCCCCC--eEEEEEECCC---CCEEEEEECCCcEEEecC
Confidence 987633 2222221 33 5799996 889999999999999985
No 119
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=4.8e-21 Score=184.33 Aligned_cols=250 Identities=10% Similarity=0.132 Sum_probs=178.3
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcccc
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASV 181 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~ 181 (427)
+.+ ++++|++|++|+.|++|++||+..+ .......+|...|.+++|+ +..+++++.++.|++|++.
T Consensus 122 ~~~--~~~~g~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~-------- 187 (445)
T 2ovr_B 122 ITC--LQFCGNRIVSGSDDNTLKVWSAVTG--KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE-------- 187 (445)
T ss_dssp EEE--EEEETTEEEEEETTSCEEEEETTTC--CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT--------
T ss_pred EEE--EEEcCCEEEEEECCCcEEEEECCCC--cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC--------
Confidence 455 4556899999999999999999877 5556667899999999998 3245555567999999997
Q ss_pred ccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCccc--------------Cc---eEEeccCCeEEEEE
Q 014302 182 RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGL--------------GT---PIRRGFGGLSILKW 244 (427)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~--------------~~---~~~~~~~~v~~~~~ 244 (427)
++ .....+..| ...|.+++|++ +.+.. +. .+..|...+.+++|
T Consensus 188 -~~----------------~~~~~~~~h-~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 188 -TG----------------ECIHTLYGH-TSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp -TT----------------EEEEEECCC-SSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred -cC----------------cEEEEECCC-CCcEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE
Confidence 11 334445555 66788888753 22221 11 24457788999998
Q ss_pred ccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccc
Q 014302 245 SPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDL 323 (427)
Q Consensus 245 sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 323 (427)
++++|++++.||.|++||+++.+.. .+..|...+.+++| +++++++++. ++.+++|++......
T Consensus 248 --~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-d~~i~i~d~~~~~~~---------- 312 (445)
T 2ovr_B 248 --DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL-DTSIRVWDVETGNCI---------- 312 (445)
T ss_dssp --CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEET-TSCEEEEETTTCCEE----------
T ss_pred --CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeC-CCeEEEEECCCCCEE----------
Confidence 7889999999999999999988763 34478899999999 7888887755 458888888764210
Q ss_pred ccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCC-CCCCceeEEeccCCCCC
Q 014302 324 PDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPG-DNPKPVAFSFHDKFKQG 402 (427)
Q Consensus 324 ~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~g 402 (427)
.....+...+.++.+ ++++|++ ++.| |.|++||++++..+.. +.+.. ......+++|. +
T Consensus 313 --~~~~~~~~~v~~~~~--~~~~l~~---~~~d---g~i~vwd~~~~~~~~~-----~~~~~~~~~~v~~~~~~-----~ 372 (445)
T 2ovr_B 313 --HTLTGHQSLTSGMEL--KDNILVS---GNAD---STVKIWDIKTGQCLQT-----LQGPNKHQSAVTCLQFN-----K 372 (445)
T ss_dssp --EEECCCCSCEEEEEE--ETTEEEE---EETT---SCEEEEETTTCCEEEE-----ECSTTSCSSCEEEEEEC-----S
T ss_pred --EEEcCCcccEEEEEE--eCCEEEE---EeCC---CeEEEEECCCCcEEEE-----EccCCCCCCCEEEEEEC-----C
Confidence 001112336677776 4678888 5555 6699999988776522 22221 22335678885 4
Q ss_pred ceeEEEeeCceEEEEecc
Q 014302 403 PLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 403 ~~l~v~~~~g~i~~~~~~ 420 (427)
..|++|..||.|.+|++.
T Consensus 373 ~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 373 NFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp SEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCeEEEEECC
Confidence 579999999999999964
No 120
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.9e-22 Score=192.21 Aligned_cols=264 Identities=11% Similarity=0.057 Sum_probs=174.0
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEcc-CCCceEEEecCCeEEEEeccCCCCccccccC
Q 014302 106 SWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRP-NGGRSLSVGCKGGICIWAPSYPGNAASVRSG 184 (427)
Q Consensus 106 ~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp-~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~ 184 (427)
.|+|+++.+++++ .|+.... ....+..+|...|++++|+| ++..+++++.++.|+||++..... +
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g~--~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~------~ 99 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRGK--LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIV------G 99 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCCC--EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHT------T
T ss_pred hcCCccccccccc------cccccce--EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECccccc------C
Confidence 4788998888765 3764332 23333377999999999999 884444444669999999871000 0
Q ss_pred cccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce------EEe------------------------
Q 014302 185 AASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP------IRR------------------------ 234 (427)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~------~~~------------------------ 234 (427)
...... +...+...|.+++|+|++++++++.. ...
T Consensus 100 -------------~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (437)
T 3gre_A 100 -------------EVYSSS--LTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKN 164 (437)
T ss_dssp -------------CCCSCS--EEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG
T ss_pred -------------ccccee--eeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccC
Confidence 000011 11124788999999999988654421 000
Q ss_pred --ccCCeEEEE--EccCCCEEEEEecCCcEEEEEcCCCCcccc-cc--CCCCeeEEEECCCCCEEEEEEcCCceeeeeee
Q 014302 235 --GFGGLSILK--WSPTGDYFFAAKFDGTFYLWETNTWTSEPW-SS--TSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 307 (427)
Q Consensus 235 --~~~~v~~~~--~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~-~~--~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~ 307 (427)
+...+.++. +++++.+|++++.|+.|++||+++.+.... .. |...|.+++|+|++++|++++.+ +.+++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-g~i~iwd~ 243 (437)
T 3gre_A 165 FGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-GIIDIWDI 243 (437)
T ss_dssp GSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-SCEEEEET
T ss_pred cccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-CeEEEEEc
Confidence 223344444 557899999999999999999998887433 34 78999999999999999987554 58888887
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEEC----CCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeee----
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWD----ASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIG---- 379 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~s----p~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~---- 379 (427)
....... .....+...|.+++|+ |++++|++ ++.| |+|++||++++.++......
T Consensus 244 ~~~~~~~-----------~~~~~~~~~v~~~~~~~~~s~~~~~l~s---~~~d---g~i~iwd~~~~~~~~~~~~~~~~~ 306 (437)
T 3gre_A 244 RFNVLIR-----------SWSFGDHAPITHVEVCQFYGKNSVIVVG---GSSK---TFLTIWNFVKGHCQYAFINSDEQP 306 (437)
T ss_dssp TTTEEEE-----------EEBCTTCEEEEEEEECTTTCTTEEEEEE---ESTT---EEEEEEETTTTEEEEEEESSSSCC
T ss_pred CCccEEE-----------EEecCCCCceEEEEeccccCCCccEEEE---EcCC---CcEEEEEcCCCcEEEEEEcCCCCC
Confidence 6531100 0011234478999665 56778888 6777 88999999987765332100
Q ss_pred ----e-----------eeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 380 ----F-----------IRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 380 ----~-----------~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
+ +.+........+++|.+ +.+|++|..||.|.+|++.
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~----~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 307 SMEHFLPIEKGLEELNFCGIRSLNALSTISVSN----DKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp CGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEET----TEEEEEEGGGTEEEEEETT
T ss_pred ccceecccccccccceecccccCCceEEEEECC----ceEEEecCCCCeEEEEECC
Confidence 0 00100112244667762 5688999899999999974
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.88 E-value=1.1e-20 Score=180.91 Aligned_cols=222 Identities=10% Similarity=0.022 Sum_probs=166.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~ 179 (427)
.|.+++|+|+++++++++.|+.|++||+... ........|...+.+++|+|++..+++++ .++.|.+||+.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~------ 242 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTL--AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK------ 242 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT------
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCc--eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC------
Confidence 7899999999999999999999999999876 34444456888999999999996666676 45999999987
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------------eE----------Eec
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------------PI----------RRG 235 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------~~----------~~~ 235 (427)
++ .....+.. ...+.+++|+|+|+.+..+. .+ ..+
T Consensus 243 ---~~----------------~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~ 301 (433)
T 3bws_A 243 ---TK----------------LEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP 301 (433)
T ss_dssp ---TT----------------EEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE
T ss_pred ---CC----------------cEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC
Confidence 11 22232332 34588999999997754332 11 113
Q ss_pred cCCeEEEEEccCCCEEE-EEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCC--------------c
Q 014302 236 FGGLSILKWSPTGDYFF-AAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGS--------------L 300 (427)
Q Consensus 236 ~~~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~--------------~ 300 (427)
...+..++|+|+++.++ +++.++.|++||+.+++......+...+.+++|+|+|++++++.... +
T Consensus 302 ~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 302 PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCC
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccce
Confidence 45788899999998765 66889999999999877655556778899999999999998877653 4
Q ss_pred eeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 301 TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
.+++|++.+... ...+..+..+.+++|+|+|++|+++ +..| +.|++|++..
T Consensus 382 ~v~~~d~~~~~~-------------~~~~~~~~~~~~~~~s~dg~~l~~~--~~~d---~~i~v~~~~~ 432 (433)
T 3bws_A 382 KVYVIDTTTDTV-------------KEFWEAGNQPTGLDVSPDNRYLVIS--DFLD---HQIRVYRRDG 432 (433)
T ss_dssp EEEEEETTTTEE-------------EEEEECSSSEEEEEECTTSCEEEEE--ETTT---TEEEEEEETT
T ss_pred EEEEEECCCCcE-------------EEEecCCCCCceEEEcCCCCEEEEE--ECCC---CeEEEEEecC
Confidence 777777654310 1122234578999999999999885 3334 6799999863
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=6.2e-20 Score=174.80 Aligned_cols=226 Identities=15% Similarity=0.175 Sum_probs=158.1
Q ss_pred CCEEEEEeCC------CeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCC---eEEEEeccCCCCcccc
Q 014302 111 KHIVAFISGS------TQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG---GICIWAPSYPGNAASV 181 (427)
Q Consensus 111 g~~lat~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~---~i~iw~~~~~~~~~~~ 181 (427)
+.+|++++.+ ++|++||++.. .......|...|.+++|+|||+.++.++.++ .|++||+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~---~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~-------- 211 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY---NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA-------- 211 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC---SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--------
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC---CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECC--------
Confidence 6677766554 79999999754 2333446788999999999995555555443 89999987
Q ss_pred ccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCc-
Q 014302 182 RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGT- 259 (427)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~- 259 (427)
++ + .. .+..+...+.+++|+|||++|+ +++.++.
T Consensus 212 -tg--------------~--~~---------------------------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 212 -NG--------------A--VR---------------------------QVASFPRHNGAPAFSPDGSKLAFALSKTGSL 247 (415)
T ss_dssp -TC--------------C--EE---------------------------EEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred -CC--------------c--EE---------------------------EeecCCCcccCEEEcCCCCEEEEEEecCCCc
Confidence 11 1 00 1222445688999999999888 6666665
Q ss_pred -EEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCc--eeeeeeeCCCCCCccccccccccccceeeccCCcee
Q 014302 260 -FYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSL--TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIE 336 (427)
Q Consensus 260 -v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 336 (427)
|++||+.+++...+..+...+.+++|+|||++|++++..++ .++.|++...... ....+...+.
T Consensus 248 ~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-------------~l~~~~~~~~ 314 (415)
T 2hqs_A 248 NLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-------------RITWEGSQNQ 314 (415)
T ss_dssp EEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-------------ECCCSSSEEE
T ss_pred eEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-------------EEecCCCccc
Confidence 99999998887666678889999999999999998876554 5666666553210 0011223678
Q ss_pred EEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCc---e
Q 014302 337 KIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSG---F 413 (427)
Q Consensus 337 ~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g---~ 413 (427)
+++|+|||++|+++.....+ ..|++||+.++.+..+. ... ...+++|.|+ |..|+++..++ .
T Consensus 315 ~~~~spdG~~l~~~~~~~g~---~~i~~~d~~~~~~~~l~------~~~---~~~~~~~spd---g~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 315 DADVSSDGKFMVMVSSNGGQ---QHIAKQDLATGGVQVLS------STF---LDETPSLAPN---GTMVIYSSSQGMGSV 379 (415)
T ss_dssp EEEECTTSSEEEEEEECSSC---EEEEEEETTTCCEEECC------CSS---SCEEEEECTT---SSEEEEEEEETTEEE
T ss_pred CeEECCCCCEEEEEECcCCc---eEEEEEECCCCCEEEec------CCC---CcCCeEEcCC---CCEEEEEEcCCCccE
Confidence 99999999999986443323 67999999988765322 111 3568889986 66666666655 6
Q ss_pred EEEEec
Q 014302 414 CCTYPL 419 (427)
Q Consensus 414 i~~~~~ 419 (427)
|.+|++
T Consensus 380 l~~~d~ 385 (415)
T 2hqs_A 380 LNLVST 385 (415)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 777764
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=4.8e-21 Score=196.26 Aligned_cols=219 Identities=16% Similarity=0.235 Sum_probs=150.9
Q ss_pred ceeeeEEcCC--CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccC--CCceEEEecCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPN--GGRSLSVGCKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~--g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~--~~~~la~g~~~~i~iw~~~~~~ 176 (427)
.|++++|+|+ +++|++|+.||+|++||+..+..........|...|++++|+|+ +..+++++.++.|++|++....
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 7999999998 89999999999999999988733355566779999999999999 7445555566999999997110
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF 256 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 256 (427)
. .....+..+ ...|.+++|+|..... .......+++++|++++.
T Consensus 135 ~-----------------------~~~~~~~~~-~~~v~~l~~~p~~~~~------------~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 135 T-----------------------TSPIIIDAH-AIGVNSASWAPATIEE------------DGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp C-----------------------CCCEEEECC-SSCEEEEEECCCC---------------------CGGGCCEEEEET
T ss_pred C-----------------------cceeEeecC-CCceEEEEecCccccc------------ccccccCCCCCEEEEEEC
Confidence 0 001111122 3334444444421000 000111337999999999
Q ss_pred CCcEEEEEcCCCCc-----cccccCCCCeeEEEECCC---CCEEEEEEcCCceeeeeeeCCCCCCcccccccccccccee
Q 014302 257 DGTFYLWETNTWTS-----EPWSSTSGFVTGATWDPE---GRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVS 328 (427)
Q Consensus 257 dg~v~iwd~~~~~~-----~~~~~~~~~v~~v~~spd---g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
||.|++||+++... ..+..|...|.+++|+|+ ++++++++ .++.+++|++........... ...
T Consensus 179 dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s-~Dg~I~iwd~~~~~~~~~~~~-------~~~ 250 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS-QDRTCIIWTQDNEQGPWKKTL-------LKE 250 (753)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-SSSCEEEEEESSSSSCCBCCB-------SSS
T ss_pred CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe-cCCEEEEecCCCCCCcceeEE-------ecc
Confidence 99999999988753 223478999999999999 88888765 555888998877421110000 111
Q ss_pred eccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 329 LTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 329 ~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
..+.+.|.+++|+|+|++|++ ++.| |.|++|++..
T Consensus 251 ~~~~~~v~~l~~spdg~~l~s---~s~D---g~I~vwd~~~ 285 (753)
T 3jro_A 251 EKFPDVLWRASWSLSGNVLAL---SGGD---NKVTLWKENL 285 (753)
T ss_dssp SCCSSCCCCEEECTTTCCEEE---ECSS---SCEECCBCCS
T ss_pred CCCCCceEEEEEcCCCCEEEE---EcCC---CEEEEEecCC
Confidence 224458999999999999998 5666 6699999974
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=2.1e-19 Score=171.11 Aligned_cols=219 Identities=11% Similarity=0.146 Sum_probs=153.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCC---eEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-C--CeEEEEeccC
Q 014302 101 DLQGVSWHQHKHIVAFISGST---QVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-K--GGICIWAPSY 174 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~---~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~--~~i~iw~~~~ 174 (427)
.|.+++|+|+|++||+++.++ .|++||+.++ ... ....|...+.+++|+|||+.++.++. + ..|.+|++.
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg--~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~- 255 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG--AVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA- 255 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC--CEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC--cEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC-
Confidence 789999999999999999875 9999999876 232 34467778999999999955554554 3 348888886
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEE
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAA 254 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~ 254 (427)
++ . . . .+..+...+.+++|+|||++|+++
T Consensus 256 --------~~--------------~--~-~--------------------------~l~~~~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 256 --------SG--------------Q--I-R--------------------------QVTDGRSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp --------TC--------------C--E-E--------------------------ECCCCSSCEEEEEECTTSSEEEEE
T ss_pred --------CC--------------C--E-E--------------------------eCcCCCCcccceEECCCCCEEEEE
Confidence 11 0 0 0 111234567889999999999976
Q ss_pred ec-CC--cEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCC--ceeeeeeeCCCCCCccccccccccccceee
Q 014302 255 KF-DG--TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGS--LTLGSIHFASKPPSLDAHLLPVDLPDIVSL 329 (427)
Q Consensus 255 ~~-dg--~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (427)
+. ++ .|++||+.+++...+..+...+.+++|+|||++|++++.++ ..+++|++..... ..+
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--------------~~l 350 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--------------QVL 350 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--------------EEC
T ss_pred ECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--------------EEe
Confidence 65 45 67788988877655556677899999999999999887653 4677777765421 111
Q ss_pred ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCC
Q 014302 330 TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKF 399 (427)
Q Consensus 330 ~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 399 (427)
..+..+.+++|+|||++|+++..... ...|++||+..+....+. + ......+++|.|..
T Consensus 351 ~~~~~~~~~~~spdg~~l~~~s~~~~---~~~l~~~d~~g~~~~~l~------~--~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 351 SSTFLDETPSLAPNGTMVIYSSSQGM---GSVLNLVSTDGRFKARLP------A--TDGQVKFPAWSPYL 409 (415)
T ss_dssp CCSSSCEEEEECTTSSEEEEEEEETT---EEEEEEEETTSCCEEECC------C--SSSEEEEEEECCCC
T ss_pred cCCCCcCCeEEcCCCCEEEEEEcCCC---ccEEEEEECCCCcEEEee------C--CCCCCcCCcccccc
Confidence 11226799999999999998644332 247999999866554322 1 11225577888764
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.86 E-value=1.3e-20 Score=169.76 Aligned_cols=203 Identities=14% Similarity=0.105 Sum_probs=122.6
Q ss_pred ceeeeEEcCC----CCEEEEEeC--------------------CCeEEEEEccCCCCcceeeccCCcCCeeEEEEcc---
Q 014302 101 DLQGVSWHQH----KHIVAFISG--------------------STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRP--- 153 (427)
Q Consensus 101 ~V~~l~~sp~----g~~lat~~~--------------------d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp--- 153 (427)
.|++++|+|| ++++++++. |+.|++|++...+ ........|...++.++|+|
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG-~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG-GGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS-CEEEEEEECCCSSCEEEEEEEET
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC-ceeeeeccCCCceeeEEeeccCC
Confidence 8999999999 888887653 7888888885542 23334446777788888888
Q ss_pred CCCceEEE-ecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccC--CCceeeeEeCCCCCCcccCc
Q 014302 154 NGGRSLSV-GCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQN--GEQITALSWGPDGRFPGLGT 230 (427)
Q Consensus 154 ~~~~~la~-g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~ 230 (427)
++ .+|++ +.|++|+|||+. ++ +++..+..+. ...+.+++|+|+|+++.
T Consensus 192 ~~-~~LaSgS~D~TIkIWDl~---------TG----------------k~l~tL~g~~~~v~~v~~vafSpdG~~lv--- 242 (356)
T 2w18_A 192 MQ-EALLGTTIMNNIVIWNLK---------TG----------------QLLKKMHIDDSYQASVCHKAYSEMGLLFI--- 242 (356)
T ss_dssp ST-TEEEEEETTSEEEEEETT---------TC----------------CEEEEEECCC---CCCEEEEEEETTEEEE---
T ss_pred CC-ceEEEecCCCcEEEEECC---------CC----------------cEEEEEcCCCcceeeeEEEEECCCCCEEE---
Confidence 55 45555 567999999998 22 3444444331 12344455555543322
Q ss_pred eEEeccCCeEEEEEc-cCCC-EEEEEecCCcEEEEEcCCCCcccc------ccCCCCeeEEEECCCCCEEEEEEcCCcee
Q 014302 231 PIRRGFGGLSILKWS-PTGD-YFFAAKFDGTFYLWETNTWTSEPW------SSTSGFVTGATWDPEGRMILLAFAGSLTL 302 (427)
Q Consensus 231 ~~~~~~~~v~~~~~s-p~g~-~l~~~~~dg~v~iwd~~~~~~~~~------~~~~~~v~~v~~spdg~~l~~~~~~~~~i 302 (427)
.++ +++. .+++|+.|++|++||..+++.... .+|.....+..++ +..++++ +.++++
T Consensus 243 ------------s~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASg-S~DgTI 307 (356)
T 2w18_A 243 ------------VLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAI-LTSGTI 307 (356)
T ss_dssp ------------EEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEE-ETTSCE
T ss_pred ------------EeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEE-cCCCcE
Confidence 111 1111 346889999999999988875322 1344444444443 6677765 555699
Q ss_pred eeeeeCCCCC--CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEe
Q 014302 303 GSIHFASKPP--SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDA 367 (427)
Q Consensus 303 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~ 367 (427)
++|++...+. ++.+|.. ..+..++|||||++||+ ++.| ++|+|||+
T Consensus 308 kIWDl~tGk~l~tL~gH~~-------------~vvs~vafSPDG~~LaS---GS~D---~TIklWd~ 355 (356)
T 2w18_A 308 AIWDLLLGQCTALLPPVSD-------------QHWSFVKWSGTDSHLLA---GQKD---GNIFVYHY 355 (356)
T ss_dssp EEEETTTCSEEEEECCC---------------CCCCEEEECSSSSEEEE---ECTT---SCEEEEEE
T ss_pred EEEECCCCcEEEEecCCCC-------------CeEEEEEECCCCCEEEE---EECC---CcEEEecC
Confidence 9999877532 2333322 12346899999999999 7777 67999996
No 126
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=7.6e-19 Score=162.25 Aligned_cols=254 Identities=12% Similarity=0.138 Sum_probs=163.2
Q ss_pred ceeeeEEcCCCCEEEEEeCC-CeEEEEEcc--CCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGS-TQVIVRDYE--DSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d-~~v~vwd~~--~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~ 176 (427)
.+.+++|+|+|++|++++.+ +.|++|+++ .+..........+ ..+.+++|+|++..+++++. ++.|.+|++. .+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~-~~ 116 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLE-DG 116 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEE-TT
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECC-CC
Confidence 57889999999999888876 999999998 3321122222222 37899999999965666665 4789999984 10
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEe-
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAK- 255 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~- 255 (427)
. .......+. ....+.+++|+|+|++|++++
T Consensus 117 ~---------------------~~~~~~~~~---------------------------~~~~~~~~~~s~dg~~l~~~~~ 148 (343)
T 1ri6_A 117 L---------------------PVGVVDVVE---------------------------GLDGCHSANISPDNRTLWVPAL 148 (343)
T ss_dssp E---------------------EEEEEEEEC---------------------------CCTTBCCCEECTTSSEEEEEEG
T ss_pred c---------------------ccccccccc---------------------------CCCCceEEEECCCCCEEEEecC
Confidence 0 001111110 123467889999999988776
Q ss_pred cCCcEEEEEcCC-CCcc-----ccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccccccee
Q 014302 256 FDGTFYLWETNT-WTSE-----PWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVS 328 (427)
Q Consensus 256 ~dg~v~iwd~~~-~~~~-----~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (427)
.++.|++||+.+ ++.. ... .....+..++|+|+|++++++...++.+.+|++......+........++. .
T Consensus 149 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~--~ 226 (343)
T 1ri6_A 149 KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE--N 226 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT--T
T ss_pred CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc--c
Confidence 899999999987 4432 122 334578899999999998887767778888888643221110000000000 0
Q ss_pred eccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec--cCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeE
Q 014302 329 LTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR--RTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLS 406 (427)
Q Consensus 329 ~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~ 406 (427)
......+..++|+|+|++|+++ +..+ +.|.+|++. ++....+ ..+.... .+..++|.|+ |..|.
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~--~~~~---~~i~v~d~~~~~~~~~~~---~~~~~~~---~~~~~~~s~d---g~~l~ 292 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYAC--DRTA---SLITVFSVSEDGSVLSKE---GFQPTET---QPRGFNVDHS---GKYLI 292 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEE--ETTT---TEEEEEEECTTSCCEEEE---EEEECSS---SCCCEEECTT---SSEEE
T ss_pred ccccCCccceEECCCCCEEEEE--ecCC---CEEEEEEEcCCCCceEEe---eeecCCC---ccceEEECCC---CCEEE
Confidence 0112356789999999999875 3334 569999997 3332211 1222211 2558889886 66666
Q ss_pred EEe-eCceEEEEecc
Q 014302 407 VCW-SSGFCCTYPLI 420 (427)
Q Consensus 407 v~~-~~g~i~~~~~~ 420 (427)
++. .++.|.+|.+-
T Consensus 293 ~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 293 AAGQKSHHISVYEIV 307 (343)
T ss_dssp EECTTTCEEEEEEEE
T ss_pred EecCCCCeEEEEEEc
Confidence 665 68999999653
No 127
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.85 E-value=2.1e-20 Score=174.32 Aligned_cols=227 Identities=12% Similarity=0.083 Sum_probs=148.1
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEE--ccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEW--RPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~--sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
.|++++|+|++++|++++.|+.|++||+... .......|...|.+++| +|++..+++++.++.|++||+....
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~-- 162 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSN---QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN-- 162 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS--
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCC---CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc--
Confidence 7999999999999999999999999999877 33335578999999999 8888445555567999999997211
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc------------c-CceEE----eccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG------------L-GTPIR----RGFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~------------~-~~~~~----~~~~~v~~ 241 (427)
.+..+.. ...+.++.+.++...+. . ..... .+...+.+
T Consensus 163 -----------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (368)
T 3mmy_A 163 -----------------------PMMVLQL--PERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRC 217 (368)
T ss_dssp -----------------------CSEEEEC--SSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEE
T ss_pred -----------------------EEEEEec--CCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCce
Confidence 1111111 11222222222111000 0 00011 12345666
Q ss_pred EEEccCCCE----EEEEecCCcEEEEEcCCCCc----cccccCCC------------CeeEEEECCCCCEEEEEEcCCce
Q 014302 242 LKWSPTGDY----FFAAKFDGTFYLWETNTWTS----EPWSSTSG------------FVTGATWDPEGRMILLAFAGSLT 301 (427)
Q Consensus 242 ~~~sp~g~~----l~~~~~dg~v~iwd~~~~~~----~~~~~~~~------------~v~~v~~spdg~~l~~~~~~~~~ 301 (427)
+++.++... +++++.||.|++||++.... ..+..|.. .|.+++|+|++++|++++.+ +.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-g~ 296 (368)
T 3mmy_A 218 VAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD-GR 296 (368)
T ss_dssp EEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT-SC
T ss_pred EEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC-Ce
Confidence 777666654 99999999999999988743 12223433 79999999999999887554 58
Q ss_pred eeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 302 LGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
+++|++...... .....+...|.+++|+|+|++||++..++.. ..+.+|+.+....+
T Consensus 297 i~iwd~~~~~~~------------~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~---~~~~~~~~~~~~~i 353 (368)
T 3mmy_A 297 FSFWDKDARTKL------------KTSEQLDQPISACCFNHNGNIFAYASSYDWS---KGHEFYNPQKKNYI 353 (368)
T ss_dssp EEEEETTTTEEE------------EECCCCSSCEEEEEECTTSSCEEEEECCCST---TCGGGCCTTSCCEE
T ss_pred EEEEECCCCcEE------------EEecCCCCCceEEEECCCCCeEEEEeccccc---ccccccCCCcccee
Confidence 888887754110 0011234589999999999999996433332 33556666554444
No 128
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.85 E-value=1.9e-19 Score=167.92 Aligned_cols=249 Identities=15% Similarity=0.107 Sum_probs=151.9
Q ss_pred ceeeeEEcCCCCEE-EEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc-
Q 014302 101 DLQGVSWHQHKHIV-AFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA- 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~l-at~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~- 178 (427)
.+..+++.++++.+ ++++.|++|+|||+..+ ..... ..+...|.+++|+++. ++++.++.|++|++......
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~--~~~~~-~~~~~~v~~v~~~~~~---~~~~~~~~i~i~d~~~~~~~~ 133 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK--QDVSR-IKVDAPVKDLFLSREF---IVVSYGDVISVFKFGNPWKRI 133 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTT--EEEEE-EECSSCEEEEEECSSE---EEEEETTEEEEEESSTTCCBS
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCC--cEEEE-EECCCceEEEEEcCCE---EEEEEcCEEEEEECCCCceee
Confidence 46788899998877 45777899999999877 33322 3466789999999764 44456789999999722011
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCC-----------CCccc-CceEEeccCCeEEEEEcc
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG-----------RFPGL-GTPIRRGFGGLSILKWSP 246 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg-----------~~l~~-~~~~~~~~~~v~~~~~sp 246 (427)
..... ......+.. . .+....+.....|.-....... ..+.. ...+..|...|.+++|+|
T Consensus 134 ~~~~~--~~~~~~~s~----~--~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~ 205 (355)
T 3vu4_A 134 TDDIR--FGGVCEFSN----G--LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR 205 (355)
T ss_dssp SCCEE--EEEEEEEET----T--EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT
T ss_pred EEecc--CCceEEEEc----c--EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC
Confidence 00000 000000000 0 0000000001111111111000 00000 234567899999999999
Q ss_pred CCCEEEEEecCCc-EEEEEcCCCCccc-cc-c-CCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC----Cccccc
Q 014302 247 TGDYFFAAKFDGT-FYLWETNTWTSEP-WS-S-TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP----SLDAHL 318 (427)
Q Consensus 247 ~g~~l~~~~~dg~-v~iwd~~~~~~~~-~~-~-~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~----~~~~~~ 318 (427)
+|++|++++.|++ |++||+++++... +. + |...|.+++|+|+|++|++++. ++.+++|++..... .+....
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~-d~~v~iw~~~~~~~~~~~~~~~~~ 284 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD-KWTLHVFEIFNDQDNKRHALKGWI 284 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET-TCEEEEEESSCCSCCCSEETTTTE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC-CCEEEEEEccCCCCccccccccee
Confidence 9999999999998 9999999988744 33 3 8999999999999999998754 55899998876421 111111
Q ss_pred cccccccc---e--eec--cCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 319 LPVDLPDI---V--SLT--GSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 319 ~~~~~~~~---~--~~~--~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
.+...... . .+. .......++|++||++|++ ++.| |.+++|++..+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~---~~~d---g~~~~~~~~~~ 337 (355)
T 3vu4_A 285 NMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVV---WPHT---RMIETFKVVFD 337 (355)
T ss_dssp ECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEE---ETTT---TEEEEEEEEEE
T ss_pred eccccccccceeEEEeccCCCCCceEEEEeCCCCEEEE---EeCC---CeEEEEEEEcC
Confidence 11100000 0 000 1123477999999999999 6666 77999998653
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=4.6e-19 Score=159.80 Aligned_cols=248 Identities=13% Similarity=0.102 Sum_probs=162.8
Q ss_pred EeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccccccccCCC
Q 014302 117 ISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGP 196 (427)
Q Consensus 117 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (427)
++.|++|++||+... .. .....|...|.+++|+|++ .+|+++.++.|.+|++..+ +
T Consensus 18 ~~~~~~i~~~d~~~~--~~-~~~~~~~~~v~~~~~spdg-~~l~~~~~~~i~~~d~~~~--------~------------ 73 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTR--KM-RVVWQTPELFEAPNWSPDG-KYLLLNSEGLLYRLSLAGD--------P------------ 73 (297)
T ss_dssp CCCCEEEEEEETTTT--EE-EEEEEESSCCEEEEECTTS-SEEEEEETTEEEEEESSSC--------C------------
T ss_pred CCcceeEEEEeCCCC--ce-eeeccCCcceEeeEECCCC-CEEEEEcCCeEEEEeCCCC--------C------------
Confidence 457899999999876 22 3334578899999999999 6777777899999999710 1
Q ss_pred CcceeEeehhcccCCCceeeeEeCCCCCCcccCc-------eE-----------E-eccCCeEEEEEccCCCEEE-EEec
Q 014302 197 GTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT-------PI-----------R-RGFGGLSILKWSPTGDYFF-AAKF 256 (427)
Q Consensus 197 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-------~~-----------~-~~~~~v~~~~~sp~g~~l~-~~~~ 256 (427)
........+....+.+++|+|+|++++... .+ . .....+..++|+|++++|+ ++..
T Consensus 74 ----~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 74 ----SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp ----SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEE
T ss_pred ----CceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECC
Confidence 112222333346788899999998754322 00 0 1223578889999999888 7888
Q ss_pred CCcEEEEEcCC--CCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCc
Q 014302 257 DGTFYLWETNT--WTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQG 334 (427)
Q Consensus 257 dg~v~iwd~~~--~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (427)
++.++||++.. .....+..+...+.+++|+|+|++|++++..++.+.+|.+....... .....+...
T Consensus 150 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~-----------~~~~~~~~~ 218 (297)
T 2ojh_A 150 DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV-----------ERITDSAYG 218 (297)
T ss_dssp TTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE-----------EECCCCSEE
T ss_pred CCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc-----------EEEecCCcc
Confidence 99999998643 33344456778899999999999999877656566666664221100 000112236
Q ss_pred eeEEEECCCCCEEEEEEecCCCc-----ceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEe
Q 014302 335 IEKIAWDASGERLAVSYKGGDDI-----YKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCW 409 (427)
Q Consensus 335 i~~v~~sp~g~~La~~~~~~~d~-----~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~ 409 (427)
+..++|+|+|++|++........ ..+.|++||+.+++...+... .+... ...+++|.|+ |..|+++.
T Consensus 219 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---~~~~~--~~~~~~~spd---g~~l~~~~ 290 (297)
T 2ojh_A 219 DWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL---FGGQG--TMNSPNWSPD---GDEFAYVR 290 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE---EESTT--TSCSCCBCTT---SSEEEEEE
T ss_pred cCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc---CCCCc--ccccceECCC---CCEEEEEE
Confidence 78999999999998864432110 125699999988776433321 11111 2346778876 66566554
Q ss_pred eC
Q 014302 410 SS 411 (427)
Q Consensus 410 ~~ 411 (427)
.+
T Consensus 291 ~~ 292 (297)
T 2ojh_A 291 YF 292 (297)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 130
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=9.3e-20 Score=174.80 Aligned_cols=226 Identities=12% Similarity=0.167 Sum_probs=156.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|.+++| ++++|++|+.||+|++||+..+ ........|...|.+++|+++ .+++++.++.|++|++....
T Consensus 175 ~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~i~vwd~~~~~---- 244 (435)
T 1p22_A 175 SVLCLQY--DERVIITGSSDSTVRVWDVNTG--EMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPT---- 244 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEESSSC--CEEEEECCCCSCEEEEECCTT--EEEEEETTSCEEEEECSSSS----
T ss_pred cEEEEEE--CCCEEEEEcCCCeEEEEECCCC--cEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCcEEEEeCCCCC----
Confidence 7889988 7889999999999999999887 455566789999999999743 56666677999999997111
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC--------------c---eEEeccCCeEEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG--------------T---PIRRGFGGLSILK 243 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--------------~---~~~~~~~~v~~~~ 243 (427)
.......+..| ...|.+++| +++++..+ . .+..|...+.+++
T Consensus 245 ------------------~~~~~~~~~~~-~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~ 303 (435)
T 1p22_A 245 ------------------DITLRRVLVGH-RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 303 (435)
T ss_dssp ------------------CCEEEEEECCC-SSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred ------------------CceeeeEecCC-CCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEE
Confidence 11112233344 667777777 45543322 1 2445778899988
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccc
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVD 322 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 322 (427)
| ++++|++++.||.|++||+++++.. .+..|...|.+++| ++++|++++. ++.+.+|++.......... ..
T Consensus 304 ~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~---~~ 375 (435)
T 1p22_A 304 Y--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAY-DGKIKVWDLVAALDPRAPA---GT 375 (435)
T ss_dssp E--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEET-TSCEEEEEHHHHTSTTSCT---TT
T ss_pred e--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeC-CCcEEEEECCCCCCccccc---cc
Confidence 8 5789999999999999999988774 44479999999999 6888887754 5588888876532100000 00
Q ss_pred cccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 323 LPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 323 ~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
........+.+.|.+++| ++++|++ ++.| |+|++||+......
T Consensus 376 ~~~~~~~~h~~~v~~l~~--~~~~l~s---~s~D---g~i~iwd~~~~~~~ 418 (435)
T 1p22_A 376 LCLRTLVEHSGRVFRLQF--DEFQIVS---SSHD---DTILIWDFLNDPAA 418 (435)
T ss_dssp TEEEEECCCSSCCCCEEE--CSSCEEE---CCSS---SEEEEEC-------
T ss_pred hheeeccCCCCCeEEEEe--CCCEEEE---EeCC---CEEEEEECCCCCCc
Confidence 000112235568999999 7788988 7777 78999999876543
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=9.1e-19 Score=179.33 Aligned_cols=251 Identities=18% Similarity=0.235 Sum_probs=163.6
Q ss_pred CCceeeeEEcCCCCEEEEEeC-CC-----eEEEEEccCCCCcceeeccCCc------------------------CCeeE
Q 014302 99 EVDLQGVSWHQHKHIVAFISG-ST-----QVIVRDYEDSGKDACILTSDSQ------------------------RDVKV 148 (427)
Q Consensus 99 ~~~V~~l~~sp~g~~lat~~~-d~-----~v~vwd~~~~~~~~~~~~~~~~------------------------~~v~~ 148 (427)
...|.+++|||||++|++++. |+ .|++||+.++ ....+...+. ..|.+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG--QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC--CEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC--ceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 447899999999999999988 88 8999999877 3333332222 23889
Q ss_pred EEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCccc
Q 014302 149 LEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGL 228 (427)
Q Consensus 149 l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~ 228 (427)
++||||| +.|+++..+.|.+|++.....+ . ..
T Consensus 114 ~~~SpDg-~~l~~~~~~~i~~~d~~~~~~~--------------------~---~~------------------------ 145 (741)
T 2ecf_A 114 YQWSPDA-QRLLFPLGGELYLYDLKQEGKA--------------------A---VR------------------------ 145 (741)
T ss_dssp CEECTTS-SEEEEEETTEEEEEESSSCSTT--------------------S---CC------------------------
T ss_pred eEECCCC-CEEEEEeCCcEEEEECCCCCcc--------------------e---EE------------------------
Confidence 9999999 5666666699999998700000 0 00
Q ss_pred CceEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc-cCCC----------------CeeEEEECCCCCE
Q 014302 229 GTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-STSG----------------FVTGATWDPEGRM 291 (427)
Q Consensus 229 ~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~----------------~v~~v~~spdg~~ 291 (427)
.+..+...+..++|||||++|+.++ ++.|++||+.+++..... .+.. .+.+++|||||++
T Consensus 146 --~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~ 222 (741)
T 2ecf_A 146 --QLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA 222 (741)
T ss_dssp --BCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC
T ss_pred --EcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCE
Confidence 1112345688899999999999877 569999999887664443 2222 1478999999999
Q ss_pred EEEEEcCCc--------------------------------eeeeeeeCC-CCCCccccccccccccceeeccCCceeEE
Q 014302 292 ILLAFAGSL--------------------------------TLGSIHFAS-KPPSLDAHLLPVDLPDIVSLTGSQGIEKI 338 (427)
Q Consensus 292 l~~~~~~~~--------------------------------~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 338 (427)
|+++..+.+ .+++|++.. .... .+.. ...+...+..+
T Consensus 223 l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~------~~~~----~~~~~~~~~~~ 292 (741)
T 2ecf_A 223 IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ------WIDL----GKEQDIYLARV 292 (741)
T ss_dssp EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE------EECC----CSCSSEEEEEE
T ss_pred EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE------EecC----CCCcceEEEEE
Confidence 998865442 333344333 2110 0000 00133478999
Q ss_pred EECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 339 AWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 339 ~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
+| |||++|++....... ....|++||+.++.+..+..... .........++|.|+ |.++.++..+|.+++|.
T Consensus 293 ~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g~~~~~~~~~~---~~~~~~~~~~~~spd---g~~~~~~~~~g~~~l~~ 364 (741)
T 2ecf_A 293 NW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASNQQRVLAHETS---PTWVPLHNSLRFLDD---GSILWSSERTGFQHLYR 364 (741)
T ss_dssp EE-EETTEEEEEEEETTS-SEEEEEEEETTTCCEEEEEEEEC---SSCCCCCSCCEECTT---SCEEEEECTTSSCEEEE
T ss_pred Ee-CCCCEEEEEEecccC-CeEEEEEEECCCCceEEEEEcCC---CCcCCcCCceEECCC---CeEEEEecCCCccEEEE
Confidence 99 999999986432221 22779999999988764432211 110001235678875 66888888888877776
Q ss_pred cc
Q 014302 419 LI 420 (427)
Q Consensus 419 ~~ 420 (427)
+-
T Consensus 365 ~~ 366 (741)
T 2ecf_A 365 ID 366 (741)
T ss_dssp EC
T ss_pred Ec
Confidence 53
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=5e-18 Score=156.32 Aligned_cols=268 Identities=9% Similarity=-0.011 Sum_probs=167.6
Q ss_pred EEcCCCC-EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCcccccc
Q 014302 106 SWHQHKH-IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAASVRS 183 (427)
Q Consensus 106 ~~sp~g~-~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~~~~~ 183 (427)
.|.++++ .+++.+.++.|++||..++ +.......+...+ .++|+|+++.+++++. ++.|.+||.. +
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~---------~ 71 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTL--EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQ---------L 71 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTC--CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECS---------S
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccc--ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECC---------C
Confidence 4566665 5677788999999999877 3333333444556 9999999965666665 5889999987 1
Q ss_pred CcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC--c----e-----------EE--eccCCeEEEEE
Q 014302 184 GAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG--T----P-----------IR--RGFGGLSILKW 244 (427)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--~----~-----------~~--~~~~~v~~~~~ 244 (427)
+ .. ....+..+ ..+..+++|+|+|+++... . . +. ........++|
T Consensus 72 ~--------------~~-~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 135 (331)
T 3u4y_A 72 E--------------PP-KVVAIQEG-QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAI 135 (331)
T ss_dssp S--------------SC-EEEEEEEC-SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEE
T ss_pred C--------------ce-eEEecccC-CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEE
Confidence 1 11 01112222 3334448888888764311 0 1 11 12345688999
Q ss_pred ccCCCEEE-EEecCCc-EEEEEcCCCCcc-----ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccc
Q 014302 245 SPTGDYFF-AAKFDGT-FYLWETNTWTSE-----PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 245 sp~g~~l~-~~~~dg~-v~iwd~~~~~~~-----~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 317 (427)
+|+|++|+ +...++. |++|++...... ...........++|+|+|++++++...++.+.+|++......
T Consensus 136 spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~---- 211 (331)
T 3u4y_A 136 SPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI---- 211 (331)
T ss_dssp CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC----
T ss_pred CCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc----
Confidence 99999777 4455688 999998754431 122445568899999999988888777778988887654210
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEe--eeeeeeCCCCCCCceeEEe
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLS--LIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~f 395 (427)
.....+..+..+..++|+|||++|+++ ...+ +.|.+||+.++++..+. +.++............++|
T Consensus 212 ------~~~~~~~~~~~~~~~~~spdg~~l~v~--~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (331)
T 3u4y_A 212 ------TLLNAVGTNNLPGTIVVSRDGSTVYVL--TEST---VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMAL 280 (331)
T ss_dssp ------EEEEEEECSSCCCCEEECTTSSEEEEE--CSSE---EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEE
T ss_pred ------ceeeeccCCCCCceEEECCCCCEEEEE--EcCC---CEEEEEECCCCceeeecccccccccCCCCcccccceEE
Confidence 001122234577899999999988775 3333 67999999988763322 2111111111111134788
Q ss_pred ccCCCCCceeEEEe-eCceEEEEec
Q 014302 396 HDKFKQGPLLSVCW-SSGFCCTYPL 419 (427)
Q Consensus 396 ~~~~~~g~~l~v~~-~~g~i~~~~~ 419 (427)
.|+ |..|.++. .++.|.+|++
T Consensus 281 spd---g~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 281 NKT---ETKLFISANISRELKVFTI 302 (331)
T ss_dssp CTT---SSEEEEEETTTTEEEEEET
T ss_pred CCC---CCEEEEecCCCCcEEEEEe
Confidence 886 55565544 4679999986
No 133
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=6.4e-18 Score=156.83 Aligned_cols=265 Identities=14% Similarity=0.147 Sum_probs=160.3
Q ss_pred ceeeeEEcCCCCEEEEEeC---CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAFISG---STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~---d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~ 176 (427)
.+..++|+|+|+ |++++. ++.|++|++..+..........+...+..++|+|+|+.+++++ .++.+.+|++...+
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC
Confidence 457899999999 554443 6899999997652222222234566789999999995555555 34889999996111
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF 256 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 256 (427)
. ...+..+..... .|. .+.....+.+++|+|+|+.+++...
T Consensus 120 ~----------------------~~~~~~~~~~~~--------~p~---------~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 120 A----------------------LTLTDTVQHSGH--------GPR---------PEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp C----------------------EEEEEEEECCCC--------CSS---------TTCSSCCEEEEEECTTSCEEEEETT
T ss_pred C----------------------eeecceeecCCC--------CCC---------ccccCCCceEEEECCCCcEEEEeCC
Confidence 1 111111110000 000 0012345788999999995556667
Q ss_pred CCcEEEEEcC-CCCcccc---c-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeecc
Q 014302 257 DGTFYLWETN-TWTSEPW---S-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 331 (427)
Q Consensus 257 dg~v~iwd~~-~~~~~~~---~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (427)
++.|++||+. .++.... . ........++|+|||++++++...++.+.+|++......+.........+. ....
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~--~~~~ 238 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA--DYTA 238 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT--TCCS
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC--CCCC
Confidence 8899999998 3433211 1 233467789999999998887777778888887753221110000000000 0111
Q ss_pred CCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC-ceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEee
Q 014302 332 SQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT-PLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWS 410 (427)
Q Consensus 332 ~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~ 410 (427)
...+..++|+|||++|+++..+ + +.|.+|++... ... ....+...+. .+..++|.|+ |..|.++..
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~--~---~~v~v~~~~~~g~~~---~~~~~~~~~~--~~~~~~~spd---g~~l~v~~~ 305 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRG--Y---NTLAVFAVTADGHLT---LIQQISTEGD--FPRDFDLDPT---EAFVVVVNQ 305 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEET--T---TEEEEEEECGGGCEE---EEEEEECSSS--CCCEEEECTT---SSEEEEEET
T ss_pred CCcceeEEECCCCCEEEEEeCC--C---CEEEEEEECCCCcEE---EeEEEecCCC--CcCeEEECCC---CCEEEEEEc
Confidence 1358899999999999775333 2 56999999633 221 1122222222 2568999886 666666654
Q ss_pred -CceEEEEecc
Q 014302 411 -SGFCCTYPLI 420 (427)
Q Consensus 411 -~g~i~~~~~~ 420 (427)
++.|.+|.+-
T Consensus 306 ~~~~v~v~~~d 316 (347)
T 3hfq_A 306 NTDNATLYARD 316 (347)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCcEEEEEEe
Confidence 5899999653
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=8.3e-19 Score=179.07 Aligned_cols=274 Identities=14% Similarity=0.114 Sum_probs=165.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcC---CeeEEEEccCCCceEEEecC---------CeEE
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQR---DVKVLEWRPNGGRSLSVGCK---------GGIC 168 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~la~g~~---------~~i~ 168 (427)
.+.+++|+|||+++++ +.|++|++||+.++ +...+...|.. .|.+++|||||+.++++..+ +.+.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g--~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETN--TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC--CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCC--cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 3578899999998876 68999999999887 33444444543 49999999999544444432 6788
Q ss_pred EEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC-------------ceEEe-
Q 014302 169 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG-------------TPIRR- 234 (427)
Q Consensus 169 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~-------------~~~~~- 234 (427)
+|++. ++ ....+.....+ ...+..++|+|||+.++.. ...+.
T Consensus 95 ~~d~~---------~~--------------~~~~l~~~~~~-~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 95 LSKIP---------HG--------------DPQSLDPPEVS-NAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp EEESS---------SC--------------CCEECCCTTCC-SCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEE
T ss_pred EEECC---------CC--------------ceEeccCCccc-cccccccEECCCCCEEEEEECCeEEEEECCCCceEEEe
Confidence 99987 11 11112111111 3347889999999885522 11111
Q ss_pred --ccCC------------------eEEEEEccCCCEEEEEecCC----------------------------------cE
Q 014302 235 --GFGG------------------LSILKWSPTGDYFFAAKFDG----------------------------------TF 260 (427)
Q Consensus 235 --~~~~------------------v~~~~~sp~g~~l~~~~~dg----------------------------------~v 260 (427)
+... +..++|||||++|++++.++ .|
T Consensus 151 ~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l 230 (723)
T 1xfd_A 151 STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISL 230 (723)
T ss_dssp CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEE
T ss_pred cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEE
Confidence 1222 26899999999999776543 79
Q ss_pred EEEEcCCCCc-ccccc------CCCCeeEEEECCCCCEEEEEEcCC---ceeeeeeeCCCCCCccccccccccccceeec
Q 014302 261 YLWETNTWTS-EPWSS------TSGFVTGATWDPEGRMILLAFAGS---LTLGSIHFASKPPSLDAHLLPVDLPDIVSLT 330 (427)
Q Consensus 261 ~iwd~~~~~~-~~~~~------~~~~v~~v~~spdg~~l~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (427)
++||+.+++. ..+.. +...+..++|||||++|++..... ..+++|++.+..... .....
T Consensus 231 ~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~-----------~~~~~ 299 (723)
T 1xfd_A 231 HVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK-----------KHEDE 299 (723)
T ss_dssp EEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE-----------EEEEE
T ss_pred EEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE-----------EEEec
Confidence 9999988774 33322 356789999999999887665432 356666655432100 00001
Q ss_pred cCCce----eEEEECCCCCEEEEE-EecCCC-cceeEEEEEE-eccCc---eEEEeeeeeeeCCCCCCCce-eEEeccCC
Q 014302 331 GSQGI----EKIAWDASGERLAVS-YKGGDD-IYKGLIAIYD-ARRTP---LISLSLIGFIRGPGDNPKPV-AFSFHDKF 399 (427)
Q Consensus 331 ~~~~i----~~v~~sp~g~~La~~-~~~~~d-~~~g~i~vwd-~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~f~~~~ 399 (427)
+.+.+ ..++|+|||++|++. .....+ .....|++|| ...+. ...++ . +.. ... .++|.|+
T Consensus 300 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~------~-~~~-~~~~~~~~spd- 370 (723)
T 1xfd_A 300 SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT------S-GDW-DVTKILAYDEK- 370 (723)
T ss_dssp CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC------C-SSS-CEEEEEEEETT-
T ss_pred cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee------c-CCe-EEEeeeEEcCC-
Confidence 11222 378999999988874 222110 0013577777 34444 22111 1 111 122 2578876
Q ss_pred CCCceeEEEeeC---ceEEEEeccccC
Q 014302 400 KQGPLLSVCWSS---GFCCTYPLIFRS 423 (427)
Q Consensus 400 ~~g~~l~v~~~~---g~i~~~~~~~~~ 423 (427)
|..|.+...+ +.+++|.+-..+
T Consensus 371 --g~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 371 --GNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp --TTEEEEEESSSCTTCCEEEEECSST
T ss_pred --CCEEEEEEcCCCCcceEEEEEeCCC
Confidence 5556554444 788898875543
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.82 E-value=1.1e-18 Score=171.47 Aligned_cols=281 Identities=11% Similarity=0.059 Sum_probs=175.8
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEc--cCCCCcceeeccCCcCCeeEEEEcc----CCCceEEEec--CCeEEEEe
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDY--EDSGKDACILTSDSQRDVKVLEWRP----NGGRSLSVGC--KGGICIWA 171 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~--~~~~~~~~~~~~~~~~~v~~l~~sp----~~~~~la~g~--~~~i~iw~ 171 (427)
+.+..++|+|||++|++++.|++|++||+ .+. ...... .+...+..++|+| ||+ +|++++ +++|.+||
T Consensus 179 ~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~~~~i-~~g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 179 YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TKVAEI-KIGIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMD 254 (543)
T ss_dssp TTEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EEEEEE-ECCSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEE
T ss_pred cccceEEECCCCCEEEEECCCCeEEEEECcCCCC--cEEEEE-ecCCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEe
Confidence 35889999999999999999999999999 444 222222 2455689999999 994 555543 59999999
Q ss_pred ccCCCCccccccCcccccccccCCCCcceeEeehhcc----------cCCCceeeeEeCCCCCCcc--------------
Q 014302 172 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRS----------QNGEQITALSWGPDGRFPG-------------- 227 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~spdg~~l~-------------- 227 (427)
.. ++ .++..+.. +....+..+.++|++..+.
T Consensus 255 ~~---------t~----------------~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~ 309 (543)
T 1nir_A 255 GE---------TL----------------EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 309 (543)
T ss_dssp TT---------TC----------------CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred cc---------cc----------------ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence 86 11 11111111 1133677888888765421
Q ss_pred -cCce----EEeccCCeEEEEEccCCCEEEE-EecCCcEEEEEcCCCCccccc-----cCCCCeeEEEECCC-CCEEEEE
Q 014302 228 -LGTP----IRRGFGGLSILKWSPTGDYFFA-AKFDGTFYLWETNTWTSEPWS-----STSGFVTGATWDPE-GRMILLA 295 (427)
Q Consensus 228 -~~~~----~~~~~~~v~~~~~sp~g~~l~~-~~~dg~v~iwd~~~~~~~~~~-----~~~~~v~~v~~spd-g~~l~~~ 295 (427)
.... .-.+...+..+.|+|+|++|++ +..+++|.+||+.+++..... .|.+....+ ++|+ |..++++
T Consensus 310 ~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~ 388 (543)
T 1nir_A 310 KDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTS 388 (543)
T ss_dssp TTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEE
T ss_pred cCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEec
Confidence 0000 1123455778999999998875 456899999999998764333 244333333 4677 4444443
Q ss_pred EcCCceeeeeeeCCCCCCccccccccccccceeec-cCCceeEEEECCCCCEEEEEEecCCCc-ceeEEEEEEeccCceE
Q 014302 296 FAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT-GSQGIEKIAWDASGERLAVSYKGGDDI-YKGLIAIYDARRTPLI 373 (427)
Q Consensus 296 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~sp~g~~La~~~~~~~d~-~~g~i~vwd~~~~~~~ 373 (427)
...++++.+|++...... . ........+. +++.+..++|+|+|++|++....+.|. ..++|.|||+.+++..
T Consensus 389 ~~~d~~V~v~d~~~~~~~-----~-~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 389 HLGDGSISLIGTDPKNHP-----Q-YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp BSSSSEEEEEECCTTTCT-----T-TBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred cCCCceEEEEEeCCCCCc-----h-hcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 335568888887762110 0 0011122233 334678899999999999942111110 0146999999998875
Q ss_pred -EEeeeeeeeCCCC-CCCceeEEeccCCCCCce-eEEEee----CceEEEEec
Q 014302 374 -SLSLIGFIRGPGD-NPKPVAFSFHDKFKQGPL-LSVCWS----SGFCCTYPL 419 (427)
Q Consensus 374 -~~~~~~~~~~~~~-~~~~~~~~f~~~~~~g~~-l~v~~~----~g~i~~~~~ 419 (427)
...+.+...+..+ ...+..++|.|+ |.. +...|+ ++.|.+|+.
T Consensus 463 ~~~~~v~~~~~~~~~~~~~~~~~~~~~---g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 463 YQVLPIAEWADLGEGAKRVVQPEYNKR---GDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp CEEECHHHHHCCCSSCCEEEEEEECSS---SSEEEEEEECCTTSCCEEEEEET
T ss_pred eEEeechhhcccCCCCCceEeccCCCC---CCEEEEEeecCCCCCCeEEEEEC
Confidence 5555554333222 335778888886 554 444553 699999873
No 136
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=5.3e-19 Score=176.04 Aligned_cols=252 Identities=13% Similarity=0.055 Sum_probs=155.8
Q ss_pred ceeeeEEcCCCCEEEEEeC-CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec----CCeEEEEeccC-
Q 014302 101 DLQGVSWHQHKHIVAFISG-STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC----KGGICIWAPSY- 174 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~-d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~----~~~i~iw~~~~- 174 (427)
.|.+++|+|||++||+++. |++++||+++.+ ....+...+...+.+++|+|| ++++++. +....||.++.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g--~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG--ETVKLNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETT--EEEECCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETT
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCC--CcEeeecccccccccccCCCC--eEEEEeccCCCCcceEEEEEecc
Confidence 6899999999999999887 999999998655 344444444468999999999 5665543 25567877762
Q ss_pred -CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc---------------cCceEEeccCC
Q 014302 175 -PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG---------------LGTPIRRGFGG 238 (427)
Q Consensus 175 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~---------------~~~~~~~~~~~ 238 (427)
.+... . +.. ...+...+|+|||+.+. .+...+.....
T Consensus 99 ~~g~~~----------------------~---l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~ 151 (582)
T 3o4h_A 99 RPGEEQ----------------------R---LEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP 151 (582)
T ss_dssp STTCCE----------------------E---CTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES
T ss_pred CCCccc----------------------c---ccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC
Confidence 22111 1 111 11223556777765421 11111111111
Q ss_pred eEEEEEccCCCEEEEEecC----CcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCc--eeeeeeeCCCCC
Q 014302 239 LSILKWSPTGDYFFAAKFD----GTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSL--TLGSIHFASKPP 312 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~d----g~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~--~i~~~~~~~~~~ 312 (427)
..+++|||||++|++++.+ +.|++||+.+++...+..+...+..++|||||+.|++ +..++ .|++|++.....
T Consensus 152 ~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~-~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 152 GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAG-LETAREARLVTVDPRDGSV 230 (582)
T ss_dssp SCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEE-EECSSCEEEEEECTTTCCE
T ss_pred CceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEE-ccCCCeeEEEEEcCCCCcE
Confidence 2788999999999977766 7799999998887777788888999999999999994 45555 677777665421
Q ss_pred C-ccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCce
Q 014302 313 S-LDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPV 391 (427)
Q Consensus 313 ~-~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (427)
. +.++...+ ... ........+|+|||..++++ +.+ ++++||++ ++... .+.+ ...
T Consensus 231 ~~~~~~~~~~-----~~~-~~~~~~~~~~spdg~~~~~~---~~~---g~~~l~~~--g~~~~-~~~~---------~v~ 286 (582)
T 3o4h_A 231 EDLELPSKDF-----SSY-RPTAITWLGYLPDGRLAVVA---RRE---GRSAVFID--GERVE-APQG---------NHG 286 (582)
T ss_dssp EECCCSCSHH-----HHH-CCSEEEEEEECTTSCEEEEE---EET---TEEEEEET--TEEEC-CCSS---------EEE
T ss_pred EEccCCCcCh-----hhh-hhccccceeEcCCCcEEEEE---EcC---CcEEEEEE--CCeec-cCCC---------ceE
Confidence 1 11110000 000 00112334499999666663 333 56999999 44432 1111 133
Q ss_pred eEEeccCCCCCceeEEEeeCc
Q 014302 392 AFSFHDKFKQGPLLSVCWSSG 412 (427)
Q Consensus 392 ~~~f~~~~~~g~~l~v~~~~g 412 (427)
+++|. ++.++.++.++.
T Consensus 287 ~~~~s----dg~~l~~~s~~~ 303 (582)
T 3o4h_A 287 RVVLW----RGKLVTSHTSLS 303 (582)
T ss_dssp EEEEE----TTEEEEEEEETT
T ss_pred EEEec----CCEEEEEEcCCC
Confidence 56665 366666666653
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=2.3e-17 Score=153.08 Aligned_cols=253 Identities=9% Similarity=0.021 Sum_probs=170.5
Q ss_pred ceeeeEEcCCCCEEEEEeC-------CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEec
Q 014302 101 DLQGVSWHQHKHIVAFISG-------STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAP 172 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~-------d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~ 172 (427)
.+..++|+|+|++|++++. ++.|.+||..+. +..... .....+..++|+|+++.++++.. ++.|.+||.
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~~~~-~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--EVTQAI-HNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--CEEEEE-EESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--eEEEEE-ecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 5789999999998888764 568999998876 222222 22345788999999965666655 488999998
Q ss_pred cCCCCccccccCcccccccccCCCCcceeEeehhcccC--------CCceeeeEeCCCCCCccc----------------
Q 014302 173 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQN--------GEQITALSWGPDGRFPGL---------------- 228 (427)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~spdg~~l~~---------------- 228 (427)
. ++ .....+..+. ...+..++|+|+|+.+..
T Consensus 119 ~---------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 119 K---------TG----------------EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp T---------TC----------------CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred C---------CC----------------eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 7 11 1111111111 112577889998875321
Q ss_pred CceEEe---ccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc-----cCCCCeeEEEECCCCCEEEEEEcCCc
Q 014302 229 GTPIRR---GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-----STSGFVTGATWDPEGRMILLAFAGSL 300 (427)
Q Consensus 229 ~~~~~~---~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~-----~~~~~v~~v~~spdg~~l~~~~~~~~ 300 (427)
+..... +...+..++|+|+|++|++++.++.|.+||+.+++..... .+...+..++|+|+|++++++...++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 174 IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 111111 2344788999999999999999999999999888764322 24556788999999999988877777
Q ss_pred eeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeee
Q 014302 301 TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGF 380 (427)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~ 380 (427)
.+.+|+..+.... ..+..+ ....++|+|+|++|+++ ...+ +.|.+||+.+++.+...+.+
T Consensus 254 ~v~~~d~~~~~~~-------------~~~~~~-~~~~~~~s~dg~~l~v~--~~~~---~~v~~~d~~~~~~~~~~~~~- 313 (353)
T 3vgz_A 254 EVLVVDTRNGNIL-------------AKVAAP-ESLAVLFNPARNEAYVT--HRQA---GKVSVIDAKSYKVVKTFDTP- 313 (353)
T ss_dssp EEEEEETTTCCEE-------------EEEECS-SCCCEEEETTTTEEEEE--ETTT---TEEEEEETTTTEEEEEEECC-
T ss_pred EEEEEECCCCcEE-------------EEEEcC-CCceEEECCCCCEEEEE--ECCC---CeEEEEECCCCeEEEEEecC-
Confidence 8888887654210 001111 22579999999988775 3334 56999999988776433221
Q ss_pred eeCCCCCCCceeEEeccCCCCCceeEEEeeC
Q 014302 381 IRGPGDNPKPVAFSFHDKFKQGPLLSVCWSS 411 (427)
Q Consensus 381 ~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~ 411 (427)
..+.+++|.|+ |..|.|+..+
T Consensus 314 -------~~~~~~~~s~d---g~~l~v~~~~ 334 (353)
T 3vgz_A 314 -------THPNSLALSAD---GKTLYVSVKQ 334 (353)
T ss_dssp -------SEEEEEEECTT---SCEEEEEEEC
T ss_pred -------CCCCeEEEcCC---CCEEEEEEcc
Confidence 13668889886 6666666665
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=8.1e-18 Score=151.59 Aligned_cols=213 Identities=12% Similarity=0.165 Sum_probs=143.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccC-CCCcceeeccCC-cCCeeEEEEccCCCceEEEec--CCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYED-SGKDACILTSDS-QRDVKVLEWRPNGGRSLSVGC--KGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~-~~~~~~~~~~~~-~~~v~~l~~sp~~~~~la~g~--~~~i~iw~~~~~~ 176 (427)
.|.+++|+|+|++|++++ ++.|++||+.. . ....+...+ ...+.+++|+|++..+++++. ++...||.++..+
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP--SPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCC--SCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC--CceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence 689999999999999986 78999999987 5 333333344 467899999999954555442 2456677665211
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc-cC----------------c--eEEeccC
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG-LG----------------T--PIRRGFG 237 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-~~----------------~--~~~~~~~ 237 (427)
. . ...+.. ...+..++|+|||+.+. .+ . .+..+..
T Consensus 120 ~---------------------~---~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 120 G---------------------T---PRLMTK--NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp C---------------------C---CEECCS--SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred C---------------------c---eEEeec--CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 1 1 111221 22477889999998644 11 0 0112446
Q ss_pred CeEEEEEccCCCEEEEEe-cCCcEEEEEcCC-CC-ccccccCCCCeeEEEECCCCCEEEEEEcCC----------ceeee
Q 014302 238 GLSILKWSPTGDYFFAAK-FDGTFYLWETNT-WT-SEPWSSTSGFVTGATWDPEGRMILLAFAGS----------LTLGS 304 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~-~dg~v~iwd~~~-~~-~~~~~~~~~~v~~v~~spdg~~l~~~~~~~----------~~i~~ 304 (427)
.+.+++|+|+|++|+.++ .++.+++|++.. .. ...+..+...+..++|+|+|++|++++.++ ..+++
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 789999999999888555 589999998863 22 234446677889999999999999877643 35777
Q ss_pred eeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEe
Q 014302 305 IHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYK 352 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~ 352 (427)
|++....... + .....+...+..++|+|+|++|+++..
T Consensus 254 ~d~~~~~~~~------~----~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 254 MDMDGGNVET------L----FDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EETTSCSCEE------E----EEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred EecCCCCcee------e----eccCCCCcccccceECCCCCEEEEEEe
Confidence 7765542100 0 001123447889999999999998643
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.79 E-value=1.9e-17 Score=152.32 Aligned_cols=233 Identities=10% Similarity=0.104 Sum_probs=150.2
Q ss_pred ceeeeEEcCCCCEEEEEeC-CCeEEEEEccCCCCcc-eeeccCCcCCeeEEEEccCCCceEEEecCC----eEEEEeccC
Q 014302 101 DLQGVSWHQHKHIVAFISG-STQVIVRDYEDSGKDA-CILTSDSQRDVKVLEWRPNGGRSLSVGCKG----GICIWAPSY 174 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~-d~~v~vwd~~~~~~~~-~~~~~~~~~~v~~l~~sp~~~~~la~g~~~----~i~iw~~~~ 174 (427)
.+ +++|+|+|++|++++. ++.|.+||.... .. ......+.....+++|+|+++.++ ++..+ .|.+|++.
T Consensus 42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~- 116 (331)
T 3u4y_A 42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQLE--PPKVVAIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFL- 116 (331)
T ss_dssp EE-EEEECSSSCEEEEEESTTCEEEEEECSSS--SCEEEEEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETT-
T ss_pred cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC--ceeEEecccCCCCccceEECCCCCEEE-EecCCCCcccEEEEECC-
Confidence 45 8999999997766655 889999999876 32 333333444444599999995444 55443 89999987
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCccc-----CceEE----------------
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGL-----GTPIR---------------- 233 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~-----~~~~~---------------- 233 (427)
++ .....+.. ......++|+|||+++.. +..+.
T Consensus 117 --------~~----------------~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 117 --------KN----------------KFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp --------TT----------------EEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred --------CC----------------CeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCc
Confidence 11 22222222 334578999999885321 11011
Q ss_pred --eccCCeEEEEEccCCCEEE-EEecCCcEEEEEcCCCCc---cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeee
Q 014302 234 --RGFGGLSILKWSPTGDYFF-AAKFDGTFYLWETNTWTS---EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHF 307 (427)
Q Consensus 234 --~~~~~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~---~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~ 307 (427)
........++|+|+|++|+ ++..++.|++||+.+++. .........+..++|+|||++|+++...++.+.+|+.
T Consensus 171 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 171 FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 1234578899999999777 455689999999998876 4444556778899999999998887766667888777
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL 372 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~ 372 (427)
.+........ .+..+. ........+..++|+|||++|+++. ..+ +.|.+||+.....
T Consensus 251 ~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~spdg~~l~v~~--~~~---~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 251 LSGTLSFVKS-FGHGLL--IDPRPLFGANQMALNKTETKLFISA--NIS---RELKVFTISGKVV 307 (331)
T ss_dssp TTTEEEEEEE-EECCCC--CCCGGGTTCCCEEECTTSSEEEEEE--TTT---TEEEEEETTSCEE
T ss_pred CCCceeeecc-cccccc--cCCCCcccccceEECCCCCEEEEec--CCC---CcEEEEEecCCcc
Confidence 6542100000 000000 0000001236689999999998753 333 5699999976543
No 140
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=1.2e-17 Score=159.71 Aligned_cols=223 Identities=11% Similarity=0.038 Sum_probs=144.0
Q ss_pred CCCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCC---------Ccc----eeeccCCcCCeeEEEEccCCCceEE----
Q 014302 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSG---------KDA----CILTSDSQRDVKVLEWRPNGGRSLS---- 160 (427)
Q Consensus 98 ~~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~---------~~~----~~~~~~~~~~v~~l~~sp~~~~~la---- 160 (427)
....++.+++++++.+|++++.|+ ++||+..... ... ......+...|.+++|+|++ .+|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS-CEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC-CEEEEEEe
Confidence 344689999999999999998887 8888754210 000 01112355679999999999 5555
Q ss_pred Eec-CCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCe
Q 014302 161 VGC-KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGL 239 (427)
Q Consensus 161 ~g~-~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v 239 (427)
+++ ++.|+|||+. .+ .. -.......+.. ...+..|...|
T Consensus 113 sgs~d~~v~iwd~~---------~~------------------~~-~~~~~~~~~~~------------~~~~~~h~~~V 152 (434)
T 2oit_A 113 SSEYGSIIAFFDVR---------TF------------------SN-EAKQQKRPFAY------------HKLLKDAGGMV 152 (434)
T ss_dssp ETTTEEEEEEEEHH---------HH------------------HC-TTCSSCCCSEE------------EECCCSGGGSE
T ss_pred ccCCCceEEEEEcc---------cc------------------cc-CCcCCcceeee------------eeccCCCCCce
Confidence 555 4899999987 00 00 00000000000 01233467889
Q ss_pred EEEEEccC-CCEEEEEecCCcEEEEEcCCCCcc-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCC-CCccc
Q 014302 240 SILKWSPT-GDYFFAAKFDGTFYLWETNTWTSE-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP-PSLDA 316 (427)
Q Consensus 240 ~~~~~sp~-g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~-~~~~~ 316 (427)
.+++|+|+ +.+|++++.||+|++||+++.... ....|...+.+++|+|+|++|++++. ++.+++|+..... ..+..
T Consensus 153 ~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~-dg~v~iwd~~~~~~~~~~~ 231 (434)
T 2oit_A 153 IDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ-NGTVVQYLPTLQEKKVIPC 231 (434)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET-TSCEEEECTTCCEEEEECC
T ss_pred EEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC-CCcEEEEccCCcccccccC
Confidence 99999998 788999999999999999987543 23367889999999999999998764 4477777765210 01111
Q ss_pred cccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC-cceeEEEEEEeccC
Q 014302 317 HLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD-IYKGLIAIYDARRT 370 (427)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d-~~~g~i~vwd~~~~ 370 (427)
+.. ....+...|.+++|++++.++++...+... .....+++|++...
T Consensus 232 ~~~-------~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 232 PPF-------YESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CTT-------CCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred Ccc-------cCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 100 000112378999999999888775333211 11234999999764
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=1.6e-17 Score=169.98 Aligned_cols=275 Identities=13% Similarity=0.130 Sum_probs=162.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.|.+++|||||++|++++. +.|++||+..+..........|...+.+++||||| +.|+.+.++.|.+|++. .+....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~~~~i~~~d~~-~g~~~~ 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-GFVSFIRGRNLWVIDLA-SGRQMQ 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-SEEEEEETTEEEEEETT-TTEEEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC-CEEEEEeCCcEEEEecC-CCCEEE
Confidence 4789999999999999986 89999999865100222334567789999999999 66777777889999987 111000
Q ss_pred cccCcccccccccCCCCcceeE--eehhcccCCCceeeeEeCCCCCCcccCc----------------------------
Q 014302 181 VRSGAASFLGALSRGPGTRWTL--VDFLRSQNGEQITALSWGPDGRFPGLGT---------------------------- 230 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~spdg~~l~~~~---------------------------- 230 (427)
+... ....... ...+.......+..++|+|||++++...
T Consensus 187 ~~~~-----------~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 187 LTAD-----------GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp CCCC-----------CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred eccC-----------CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 0000 0000000 0000000012246788999988754321
Q ss_pred --------eEE-----------------eccCCeEEEEEccCCCEEEEEec-----CCcEEEEEcCCCCccccc-cCC-C
Q 014302 231 --------PIR-----------------RGFGGLSILKWSPTGDYFFAAKF-----DGTFYLWETNTWTSEPWS-STS-G 278 (427)
Q Consensus 231 --------~~~-----------------~~~~~v~~~~~sp~g~~l~~~~~-----dg~v~iwd~~~~~~~~~~-~~~-~ 278 (427)
.+. .+...+..++| |||++|++++. +..|++||+.+++..... .+. .
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 334 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT 334 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS
T ss_pred CCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC
Confidence 110 12234678899 99999996553 567999999988765443 222 2
Q ss_pred ---CeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEE-EECCCCCEEEEEEecC
Q 014302 279 ---FVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKI-AWDASGERLAVSYKGG 354 (427)
Q Consensus 279 ---~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v-~~sp~g~~La~~~~~~ 354 (427)
.+..++|+|||++++++ +.++...+|.+..... . . ....+...|..+ .|+|+|++|+++. .
T Consensus 335 ~~~~~~~~~~spdg~~~~~~-~~~g~~~l~~~~~~~~-~----~-------~l~~~~~~v~~~~~~s~dg~~l~~~~--~ 399 (741)
T 2ecf_A 335 WVPLHNSLRFLDDGSILWSS-ERTGFQHLYRIDSKGK-A----A-------ALTHGNWSVDELLAVDEKAGLAYFRA--G 399 (741)
T ss_dssp CCCCCSCCEECTTSCEEEEE-CTTSSCEEEEECSSSC-E----E-------ESCCSSSCEEEEEEEETTTTEEEEEE--C
T ss_pred cCCcCCceEECCCCeEEEEe-cCCCccEEEEEcCCCC-e----e-------eeeecceEEEeEeEEeCCCCEEEEEE--e
Confidence 45689999999966554 5555444444432100 0 0 011123367776 5999999987753 3
Q ss_pred CCcceeEEEEEEecc-Cc-eEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeC----ceEEEEe
Q 014302 355 DDIYKGLIAIYDARR-TP-LISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSS----GFCCTYP 418 (427)
Q Consensus 355 ~d~~~g~i~vwd~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~----g~i~~~~ 418 (427)
.+. ...++||++.. +. ...+. . ......++|.|+ |..|++..++ +.+.+++
T Consensus 400 ~~~-~~~~~l~~~~~~g~~~~~l~------~---~~~~~~~~~spd---g~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 400 IES-ARESQIYAVPLQGGQPQRLS------K---APGMHSASFARN---ASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp SSC-TTCBEEEEEETTCCCCEECC------C---SCSEEEEEECTT---SSEEEEEEEETTEEEEEEEEE
T ss_pred CCC-CceEEEEEEEcCCCCeeecc------c---CCCceEEEECCC---CCEEEEEecCCCCCCeEEEEE
Confidence 321 02589999864 33 22121 1 112447788886 6666666554 4566665
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.79 E-value=2.5e-17 Score=167.68 Aligned_cols=276 Identities=12% Similarity=0.083 Sum_probs=166.1
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCC----
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYP---- 175 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~---- 175 (427)
..|.+++|||| ..++.+ .++.+++||+..+ .... ...+...+.+++||||| +.|+.+.++.|.+|++...
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~--~~~~-l~~~~~~~~~~~~SpdG-~~la~~~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR--KVTY-LFDTNEETASLDFSPVG-DRVAYVRNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT--EEEE-EECCTTCCTTCEECTTS-SEEEEEETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC--ceEE-ccCCcccccCCcCCCCC-CEEEEEECCeEEEEecCcccccC
Confidence 36899999999 666655 3599999999876 3322 33456678999999999 5666677899999999720
Q ss_pred CCccccccCcccccccccCCCCcce-eEeehhcccCCCceeeeEeCCCCCCcccCc------------------------
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRW-TLVDFLRSQNGEQITALSWGPDGRFPGLGT------------------------ 230 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~spdg~~l~~~~------------------------ 230 (427)
+........ ..... .-....+.+ ...+.+++|+|||++++...
T Consensus 156 g~~~~~~~~-----------~~~~~~~g~~~~~ee-~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 156 SRAIAVTID-----------GTETLVYGQAVHQRE-FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp CCCEESCSC-----------CBTTEEESSCCGGGC-TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred CCcEEeccC-----------CCCCeEcccchhhhh-cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 211111000 00000 000001111 23467899999998765432
Q ss_pred ------------eE-----------E-----eccCCeEEEEEccCCCEEEEEecCC-----cEEEEEcCCC-Cccccc--
Q 014302 231 ------------PI-----------R-----RGFGGLSILKWSPTGDYFFAAKFDG-----TFYLWETNTW-TSEPWS-- 274 (427)
Q Consensus 231 ------------~~-----------~-----~~~~~v~~~~~sp~g~~l~~~~~dg-----~v~iwd~~~~-~~~~~~-- 274 (427)
.+ . .+...+..++|+|||++|++++.++ .|++||+.++ ......
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~ 303 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE 303 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc
Confidence 00 0 1224578899999999999877775 8999999988 333222
Q ss_pred cCCC---CeeEEEECC--CCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceee-ccCCceeE-EEECCCCCEE
Q 014302 275 STSG---FVTGATWDP--EGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSL-TGSQGIEK-IAWDASGERL 347 (427)
Q Consensus 275 ~~~~---~v~~v~~sp--dg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~-v~~sp~g~~L 347 (427)
.+.. .+..++|+| ||++++++ ..++.+.+|.+...... ...+ .+...+.. ++|+|+|++|
T Consensus 304 ~~~~~~~~~~~~~~sp~~dg~~l~~~-~~~g~~~l~~~~~~~~~------------~~~l~~~~~~v~~~~~~spdg~~l 370 (706)
T 2z3z_A 304 TDKHYVEPLHPLTFLPGSNNQFIWQS-RRDGWNHLYLYDTTGRL------------IRQVTKGEWEVTNFAGFDPKGTRL 370 (706)
T ss_dssp ECSSCCCCCSCCEECTTCSSEEEEEE-CTTSSCEEEEEETTSCE------------EEECCCSSSCEEEEEEECTTSSEE
T ss_pred cCCCeECccCCceeecCCCCEEEEEE-ccCCccEEEEEECCCCE------------EEecCCCCeEEEeeeEEcCCCCEE
Confidence 2222 246789999 99977755 44445555555421000 0011 12235666 7999999999
Q ss_pred EEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeC----ceEEEEec
Q 014302 348 AVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSS----GFCCTYPL 419 (427)
Q Consensus 348 a~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~----g~i~~~~~ 419 (427)
+++........ ..|..||+.++....+.. ......++|.|+ |..+++..++ +.|.+|++
T Consensus 371 ~~~~~~~~~~~-~~l~~~d~~~~~~~~l~~---------~~~~~~~~~spd---g~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 371 YFESTEASPLE-RHFYCIDIKGGKTKDLTP---------ESGMHRTQLSPD---GSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEESSSCTTC-BEEEEEETTCCCCEESCC---------SSSEEEEEECTT---SSEEEEEEECSSCSCEEEEEES
T ss_pred EEEecCCCCce-EEEEEEEcCCCCceeccC---------CCceEEEEECCC---CCEEEEEecCCCCCcEEEEEEC
Confidence 88633321001 257777877765432221 112457788886 5556655454 45888764
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.78 E-value=5.1e-17 Score=149.91 Aligned_cols=245 Identities=9% Similarity=0.073 Sum_probs=152.4
Q ss_pred EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCccccccc
Q 014302 113 IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLGA 191 (427)
Q Consensus 113 ~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~~~~~ 191 (427)
.+++++.|+.|++|+++............+...+.+++|+|+++.+++++.+ +.+.+|+++..+ +
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~-------~------- 72 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD-------G------- 72 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT-------C-------
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC-------C-------
Confidence 3444477999999999643222223334567789999999999556666655 899999986100 0
Q ss_pred ccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEe-cCCcEEEEEcCCC--
Q 014302 192 LSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAK-FDGTFYLWETNTW-- 268 (427)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~dg~v~iwd~~~~-- 268 (427)
....+. .+.. ...+..++|+|+|++|++++ .++.|++||+..+
T Consensus 73 -------~~~~~~--------------------------~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 73 -------ALTFAA--------------------------ESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP 118 (343)
T ss_dssp -------CEEEEE--------------------------EEEC-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE
T ss_pred -------ceeecc--------------------------cccc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc
Confidence 111111 1111 12567899999999888655 4888999999522
Q ss_pred -CccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC-CCCCccccccccccccceeeccCCceeEEEECCCCCE
Q 014302 269 -TSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS-KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGER 346 (427)
Q Consensus 269 -~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~ 346 (427)
+..........+.+++|+|+|++++++...++.+.+|++.. ..... .. ........+..+..++|+|+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA--QD-----PAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE--EE-----EEEEECSTTCCEEEEEECTTSSE
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee--ec-----ccccccCCCCCcceEEECCCCCE
Confidence 22222344556889999999999988775667888988865 21100 00 00001112336789999999998
Q ss_pred EEEEEecCCCcceeEEEEEEecc--CceEEEeeeeeeeCC-CCCCCceeEEeccCCCCCceeE-EEeeCceEEEEecc
Q 014302 347 LAVSYKGGDDIYKGLIAIYDARR--TPLISLSLIGFIRGP-GDNPKPVAFSFHDKFKQGPLLS-VCWSSGFCCTYPLI 420 (427)
Q Consensus 347 La~~~~~~~d~~~g~i~vwd~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~g~~l~-v~~~~g~i~~~~~~ 420 (427)
|+++ +..+ +.|.+|++.. +..........+... .....+..++|.|+ |..|. .+..++.|.+|++-
T Consensus 192 l~~~--~~~~---~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d---g~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 192 AYCV--NELN---SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD---GRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEE--ETTT---TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT---SSEEEEEETTTTEEEEEEEC
T ss_pred EEEE--eCCC---CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC---CCEEEEEecCCCEEEEEEEc
Confidence 8775 3334 5699999953 443222221111111 11233557899886 54454 44478999999874
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=8.2e-17 Score=153.88 Aligned_cols=260 Identities=13% Similarity=0.139 Sum_probs=159.6
Q ss_pred ceeeeEEcCCCCEEE----EEeCCCeEEEEEccCC-----CC-c---ceeeccCCcCCeeEEEEccCCCceEEEe-cCCe
Q 014302 101 DLQGVSWHQHKHIVA----FISGSTQVIVRDYEDS-----GK-D---ACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGG 166 (427)
Q Consensus 101 ~V~~l~~sp~g~~la----t~~~d~~v~vwd~~~~-----~~-~---~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~ 166 (427)
.|++++|+|+|++|| +++.|++|+|||+... .. . ......+|...|.+++|+|+...+|+++ .++.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 699999999999999 7888999999998653 00 0 1234456899999999999844666655 5699
Q ss_pred EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc
Q 014302 167 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP 246 (427)
Q Consensus 167 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp 246 (427)
|++||+. .+ .... ....|...+.+++|+|
T Consensus 174 v~iwD~~---------~~----------------~~~~--------------------------~~~~~~~~v~~v~wsp 202 (434)
T 2oit_A 174 IAVLQVT---------ET----------------VKVC--------------------------ATLPSTVAVTSVCWSP 202 (434)
T ss_dssp EEEEEES---------SS----------------EEEE--------------------------EEECGGGCEEEEEECT
T ss_pred EEEEEcC---------CC----------------ccee--------------------------eccCCCCceeEEEEcC
Confidence 9999997 10 0000 1122566899999999
Q ss_pred CCCEEEEEecCCcEEEEEcCCCCc-cccc-------cCCCCeeEEEECCCCCEEEEEEcCCc------eeeeeeeCCCCC
Q 014302 247 TGDYFFAAKFDGTFYLWETNTWTS-EPWS-------STSGFVTGATWDPEGRMILLAFAGSL------TLGSIHFASKPP 312 (427)
Q Consensus 247 ~g~~l~~~~~dg~v~iwd~~~~~~-~~~~-------~~~~~v~~v~~spdg~~l~~~~~~~~------~i~~~~~~~~~~ 312 (427)
+|++|++|+.||.|++||++ ++. ..+. .|...+.+++|++++.++++....++ .+.+|++.....
T Consensus 203 dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~ 281 (434)
T 2oit_A 203 KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEE 281 (434)
T ss_dssp TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTT
T ss_pred CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCC
Confidence 99999999999999999998 332 1111 22348999999999988876554442 256666654321
Q ss_pred ----CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC--ceEEEee--eee----
Q 014302 313 ----SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT--PLISLSL--IGF---- 380 (427)
Q Consensus 313 ----~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~--~~~~~~~--~~~---- 380 (427)
.+.....+. ... .....+...+.+-++.++|++++..+.| |.|+..... ....... ..-
T Consensus 282 ~~~~~~~~~~~~~-~~~---~~~r~~~~~~~~l~dw~l~~v~s~~s~d-----v~vl~~~~~~~~~~~~~~~d~~ra~lP 352 (434)
T 2oit_A 282 KHPEIFVNFMEPC-YGS---CTERQHHYYLSYIEEWDLVLAASAASTE-----VSILARQSDQINWESWLLEDSSRAELP 352 (434)
T ss_dssp CCCCEEEECCCSS-CCC---CSSSCCCEEEEEEGGGTEEEEEETTCSB-----CEEEEECTTSSCEEEEEECGGGCCBCC
T ss_pred CCCcceEecccCC-CCC---CCCcCcceeeehhccCCEEEEecCCCCc-----eeEEEecCCCCccEEEecccccccccc
Confidence 111111110 000 0011122233333777888887666665 666654321 1110000 000
Q ss_pred eeCCCCCCCceeEEeccCCC------------CCceeEEEeeCceEEEEeccc
Q 014302 381 IRGPGDNPKPVAFSFHDKFK------------QGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 381 ~~~~~~~~~~~~~~f~~~~~------------~g~~l~v~~~~g~i~~~~~~~ 421 (427)
+....++..++.+++.-... ...+|.+-.++|.+..|-|++
T Consensus 353 ~~~~~~dt~piG~~~d~~~~~~v~~~~~~~~~p~P~l~~l~~~G~L~~~~~~~ 405 (434)
T 2oit_A 353 VTDKSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMIN 405 (434)
T ss_dssp BCTTSCBCCEEEEEEECCCCCCEEEETTEEECCCCEEEEEETTSEEEEEEEEE
T ss_pred CCCCCCCceeeEEEEEccCCceeecCccccCCCCCEEEEECCCCEEEEEEEEe
Confidence 00112233344444432221 235788888999999999887
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.77 E-value=1.1e-16 Score=157.13 Aligned_cols=236 Identities=15% Similarity=0.156 Sum_probs=163.0
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEccCCCCcceeecc-CCcCCeeEEEEccCCCceEEEecCCeEEEEec--cCCCCccccc
Q 014302 106 SWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTS-DSQRDVKVLEWRPNGGRSLSVGCKGGICIWAP--SYPGNAASVR 182 (427)
Q Consensus 106 ~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~--~~~~~~~~~~ 182 (427)
+|+|++.++++++.|++|.+||..+. +...... ++. +..++|+|||+.+++++.++.|.+||+ .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~--~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~--------- 210 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSK--KIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAK--------- 210 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTC--CEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSS---------
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCc--eEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCC---------
Confidence 48899999999999999999998876 3333333 333 889999999966666666799999999 4
Q ss_pred cCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc----CCCEEEEEe-cC
Q 014302 183 SGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP----TGDYFFAAK-FD 257 (427)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp----~g~~l~~~~-~d 257 (427)
++ .++. .++ +......++|+| ||++|++++ .+
T Consensus 211 t~----------------~~~~--------------------------~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 211 EP----------------TKVA--------------------------EIK-IGIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp SC----------------EEEE--------------------------EEE-CCSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred CC----------------cEEE--------------------------EEe-cCCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 11 1111 111 234567899999 999999776 58
Q ss_pred CcEEEEEcCCCCcccccc------------CCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccccc
Q 014302 258 GTFYLWETNTWTSEPWSS------------TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPD 325 (427)
Q Consensus 258 g~v~iwd~~~~~~~~~~~------------~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 325 (427)
++|.+||..+.+...... ....+.++.++|++..++++..+++.+.+|++.+.... .
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l-~---------- 316 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL-T---------- 316 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC-E----------
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc-e----------
Confidence 999999999887643321 13378899999999988888888889999988764210 0
Q ss_pred ceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCcee
Q 014302 326 IVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLL 405 (427)
Q Consensus 326 ~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l 405 (427)
...+..+..+.+++|+|+|++|+++..+ + ++|.+||+.+++++...+.+.. +... ....+ ++|+ .|.++
T Consensus 317 ~~~i~~~~~~~~~~~spdg~~l~va~~~--~---~~v~v~D~~tg~l~~~i~~g~~--ph~g-~g~~~-~~p~--~g~~~ 385 (543)
T 1nir_A 317 VTSIGAAPFLHDGGWDSSHRYFMTAANN--S---NKVAVIDSKDRRLSALVDVGKT--PHPG-RGANF-VHPK--YGPVW 385 (543)
T ss_dssp EEEEECCSSCCCEEECTTSCEEEEEEGG--G---TEEEEEETTTTEEEEEEECSSS--BCCT-TCEEE-EETT--TEEEE
T ss_pred eEEeccCcCccCceECCCCCEEEEEecC--C---CeEEEEECCCCeEEEeeccCCC--CCCC-CCccc-CCCC--CccEE
Confidence 1112233467899999999998875333 3 4699999999987755443321 1110 11122 3554 35666
Q ss_pred EEEe-eCceEEEEec
Q 014302 406 SVCW-SSGFCCTYPL 419 (427)
Q Consensus 406 ~v~~-~~g~i~~~~~ 419 (427)
+.+. .++.|.+|+.
T Consensus 386 ~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 386 STSHLGDGSISLIGT 400 (543)
T ss_dssp EEEBSSSSEEEEEEC
T ss_pred EeccCCCceEEEEEe
Confidence 6664 5789999975
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=1.3e-15 Score=142.10 Aligned_cols=260 Identities=15% Similarity=0.164 Sum_probs=160.0
Q ss_pred ceeeeEEcCCCCEEEEEeCC----CeEEEEEccCCCCccee--eccCCcCCeeEEEEccCCCceEEEec-CCeEEEEecc
Q 014302 101 DLQGVSWHQHKHIVAFISGS----TQVIVRDYEDSGKDACI--LTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPS 173 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d----~~v~vwd~~~~~~~~~~--~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~ 173 (427)
.+..++|+|+|++|++++.+ +.|.+|+++........ ....+......+++ +++.++++.. ++.+.+|++.
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~ 128 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIG 128 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBC
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeC
Confidence 56789999999999998875 79999999874222222 22224456777887 7745555553 4889999997
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEE
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFA 253 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~ 253 (427)
..+..... ...+.....+. .+.+.+...+.+++|+|+|++|++
T Consensus 129 ~~g~~~~~--------------------------------~~~~~~~g~~~-----~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 129 QDGALLPA--------------------------------SDVIEFKGSGP-----DKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp TTSCBCSC--------------------------------SEEEECCCCCS-----CTTTCSSCCEEEEEECTTSSEEEE
T ss_pred CCCcCccc--------------------------------ceeEEccCCCC-----CccccCCCcceEEEECCCCCEEEE
Confidence 21110000 00000000000 001112345788999999998875
Q ss_pred Ee-cCCcEEEEEcCCCCc----c---------c-cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccc
Q 014302 254 AK-FDGTFYLWETNTWTS----E---------P-WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHL 318 (427)
Q Consensus 254 ~~-~dg~v~iwd~~~~~~----~---------~-~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~ 318 (427)
++ .++.|++|++..... . . ..........++|+|||++++++...++.+.+|++.+......
T Consensus 172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~--- 248 (361)
T 3scy_A 172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI--- 248 (361)
T ss_dssp EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE---
T ss_pred EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe---
Confidence 44 588999999875442 1 1 1244566789999999999988876777888888874311000
Q ss_pred ccccccccee-eccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec--cCceEEEeeeeeeeCCCCCCCceeEEe
Q 014302 319 LPVDLPDIVS-LTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR--RTPLISLSLIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 319 ~~~~~~~~~~-~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~f 395 (427)
..... ..+...+..++|+|||++|+++..+. + +.|.+|++. ++.+..+ ..+.. + ..+.+++|
T Consensus 249 -----~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~-~---~~i~v~~~~~~~g~~~~~---~~~~~-g--~~~~~~~~ 313 (361)
T 3scy_A 249 -----QTVAADTVNAQGSGDIHLSPDGKYLYASNRLK-A---DGVAIFKVDETNGTLTKV---GYQLT-G--IHPRNFII 313 (361)
T ss_dssp -----EEEESCSSCCCCEEEEEECTTSSEEEEEECSS-S---CEEEEEEECTTTCCEEEE---EEEEC-S--SCCCEEEE
T ss_pred -----EEEecCCCCCCCcccEEECCCCCEEEEECCCC-C---CEEEEEEEcCCCCcEEEe---eEecC-C--CCCceEEE
Confidence 00000 01122468999999999998753331 2 569999995 4443222 22222 2 23568999
Q ss_pred ccCCCCCceeEEEe-eCceEEEEecc
Q 014302 396 HDKFKQGPLLSVCW-SSGFCCTYPLI 420 (427)
Q Consensus 396 ~~~~~~g~~l~v~~-~~g~i~~~~~~ 420 (427)
.|+ |..|.++. .++.|.+|.+=
T Consensus 314 spd---g~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 314 TPN---GKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CTT---SCEEEEEETTTTEEEEEEEC
T ss_pred CCC---CCEEEEEECCCCCEEEEEEE
Confidence 986 66666665 67899997653
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.77 E-value=3.2e-17 Score=166.93 Aligned_cols=228 Identities=16% Similarity=0.230 Sum_probs=150.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccC-----CCCcceeeccCCcCC--------------eeEEEEccCCCceEEE
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYED-----SGKDACILTSDSQRD--------------VKVLEWRPNGGRSLSV 161 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~-----~~~~~~~~~~~~~~~--------------v~~l~~sp~~~~~la~ 161 (427)
.+.+++|||||++||++ .|+.|++|++.. + ....+...+... +.+++|||||+.++++
T Consensus 122 ~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g--~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS--RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp CCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC--CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred cccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC--CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 57889999999999996 689999999987 5 233333333332 4899999999555444
Q ss_pred e---------------------------------cCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcc
Q 014302 162 G---------------------------------CKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRS 208 (427)
Q Consensus 162 g---------------------------------~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (427)
+ .+..|.+|++. ++ ....+.. ..
T Consensus 199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~---------~~--------------~~~~~~~-~~ 254 (706)
T 2z3z_A 199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA---------TG--------------KTVYLQT-GE 254 (706)
T ss_dssp EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT---------TT--------------EEEECCC-CS
T ss_pred EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC---------CC--------------ceEeecc-CC
Confidence 4 12557788876 11 1111111 11
Q ss_pred cCCCceeeeEeCCCCCCcccCc-------------------eEE----ec-cC---CeEEEEEcc--CCCEEEEEecCCc
Q 014302 209 QNGEQITALSWGPDGRFPGLGT-------------------PIR----RG-FG---GLSILKWSP--TGDYFFAAKFDGT 259 (427)
Q Consensus 209 ~~~~~v~~~~~spdg~~l~~~~-------------------~~~----~~-~~---~v~~~~~sp--~g~~l~~~~~dg~ 259 (427)
.....+..++|+|||+.++... ..+ .. .. .+..++|+| ||++|++++.|+.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 2256688999999998654211 110 01 11 135679999 9999999999999
Q ss_pred EEEEEcC-CCCc-cccccCCCCeeE-EEECCCCCEEEEEEcCCc----eeeeeeeCCCCCCccccccccccccceeeccC
Q 014302 260 FYLWETN-TWTS-EPWSSTSGFVTG-ATWDPEGRMILLAFAGSL----TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGS 332 (427)
Q Consensus 260 v~iwd~~-~~~~-~~~~~~~~~v~~-v~~spdg~~l~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (427)
++||++. .++. ..+..+...+.. ++|+|||+.|++++..++ .++.|++..... ..+.+.
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~--------------~~l~~~ 400 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT--------------KDLTPE 400 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC--------------EESCCS
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc--------------eeccCC
Confidence 9999886 3333 334456666776 799999999988877654 566665544311 111233
Q ss_pred CceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 333 QGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 333 ~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
..+.+++|||||++|++...+. ..++.|++||+.++.
T Consensus 401 ~~~~~~~~spdg~~l~~~~~~~--~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 401 SGMHRTQLSPDGSAIIDIFQSP--TVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSEEEEEECTTSSEEEEEEECS--SCSCEEEEEESSSCE
T ss_pred CceEEEEECCCCCEEEEEecCC--CCCcEEEEEECCCCe
Confidence 4688999999999998864332 233679999998776
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.77 E-value=2.1e-17 Score=168.74 Aligned_cols=245 Identities=12% Similarity=0.140 Sum_probs=142.0
Q ss_pred ceeeeEEcCCCCEEEEEeCC---------CeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEe
Q 014302 101 DLQGVSWHQHKHIVAFISGS---------TQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWA 171 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d---------~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~ 171 (427)
.|.+++|||||++||+++.+ +.+.+||+..+..........|...+..++||||| +.|+.+.++.|.+|+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFENNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST-TCEEEEETTEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC-CEEEEEECCeEEEEE
Confidence 48999999999999999764 78889999877321222223355568999999999 566666678899999
Q ss_pred ccCCCCccccccCcccccccccCCCCcceeEe-e-hhcccCCCceeeeEeCCCCCCcccCc-------------------
Q 014302 172 PSYPGNAASVRSGAASFLGALSRGPGTRWTLV-D-FLRSQNGEQITALSWGPDGRFPGLGT------------------- 230 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~v~~~~~spdg~~l~~~~------------------- 230 (427)
+. .+....+........ -..-. . .........+..++|+|||+.++...
T Consensus 141 ~~-~g~~~~~~~~~~~~~---------~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 210 (723)
T 1xfd_A 141 HV-GKQAIRVVSTGKEGV---------IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIY 210 (723)
T ss_dssp SS-SSCCEEEECCCBTTT---------EEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSS
T ss_pred CC-CCceEEEecCCCCCc---------eECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCC
Confidence 87 111111100000000 00000 0 00000011336777888877643211
Q ss_pred ------------------eE--------------Eec------cCCeEEEEEccCCCEEEEEec----CCcEEEEEcCCC
Q 014302 231 ------------------PI--------------RRG------FGGLSILKWSPTGDYFFAAKF----DGTFYLWETNTW 268 (427)
Q Consensus 231 ------------------~~--------------~~~------~~~v~~~~~sp~g~~l~~~~~----dg~v~iwd~~~~ 268 (427)
.+ ..+ ...+..++|||||++|++... +..|++||+.++
T Consensus 211 ~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 211 PTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp CCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred CcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 01 001 234677999999998875543 257999999988
Q ss_pred Cccccc--cCCCCe----eEEEECCCCCEEEEE-EcCCc------eeeeeee-CCCCCCccccccccccccceeeccCCc
Q 014302 269 TSEPWS--STSGFV----TGATWDPEGRMILLA-FAGSL------TLGSIHF-ASKPPSLDAHLLPVDLPDIVSLTGSQG 334 (427)
Q Consensus 269 ~~~~~~--~~~~~v----~~v~~spdg~~l~~~-~~~~~------~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (427)
+..... .+...+ ..++|+|||+.|++. +..++ .++.|++ ....... ...+ ..+...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~~l-------~~~~~~ 360 (723)
T 1xfd_A 291 VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN---IQSI-------TSGDWD 360 (723)
T ss_dssp CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC---CCBS-------CCSSSC
T ss_pred cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccc---eeEe-------ecCCeE
Confidence 764433 333443 388999999988876 54544 4555552 2221000 0000 011223
Q ss_pred eeE-EEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 335 IEK-IAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 335 i~~-v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
+.. ++|+|||++|+.+..... .+.++||++..
T Consensus 361 ~~~~~~~spdg~~l~~~~~~~~---~~~~~l~~~~~ 393 (723)
T 1xfd_A 361 VTKILAYDEKGNKIYFLSTEDL---PRRRQLYSANT 393 (723)
T ss_dssp EEEEEEEETTTTEEEEEESSSC---TTCCEEEEECS
T ss_pred EEeeeEEcCCCCEEEEEEcCCC---CcceEEEEEeC
Confidence 444 699999999987533321 13488999864
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.76 E-value=5.5e-17 Score=149.30 Aligned_cols=249 Identities=10% Similarity=0.071 Sum_probs=156.5
Q ss_pred CEEEEEeCCCeEEEEEccCCCCcceee-ccCCcC-CeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCcccc
Q 014302 112 HIVAFISGSTQVIVRDYEDSGKDACIL-TSDSQR-DVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASF 188 (427)
Q Consensus 112 ~~lat~~~d~~v~vwd~~~~~~~~~~~-~~~~~~-~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~~ 188 (427)
++|++++.+++|++||..+. +.... ..++.. .+..++|+|+++.+++++.. +.|.+||+. ++
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~---------~~---- 66 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV---------TG---- 66 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETT---------TC----
T ss_pred cEEEEcCCCCeEEEEECCCC--cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECC---------CC----
Confidence 47899999999999999876 23222 222222 48899999999666666654 889999986 11
Q ss_pred cccccCCCCcceeEeehhcccC----CCceeeeEeCCCCCCcccC---------------ceE-----------E--ecc
Q 014302 189 LGALSRGPGTRWTLVDFLRSQN----GEQITALSWGPDGRFPGLG---------------TPI-----------R--RGF 236 (427)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~spdg~~l~~~---------------~~~-----------~--~~~ 236 (427)
.....+.... ...+..++|+|+|+.+... ..+ . ...
T Consensus 67 ------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 134 (337)
T 1pby_B 67 ------------ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP 134 (337)
T ss_dssp ------------CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC
T ss_pred ------------CeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC
Confidence 1111111110 1145677888888654322 111 1 123
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCcee--------------
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTL-------------- 302 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i-------------- 302 (427)
..+..++|+|+|++|+++ ++.|++||+.+++.............+.|+|+|+.++++...++.+
T Consensus 135 ~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 212 (337)
T 1pby_B 135 RQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPA 212 (337)
T ss_dssp SSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTT
T ss_pred CCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccc
Confidence 456778899999988877 6889999998877643322111112347899999877655444332
Q ss_pred ---------eeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 303 ---------GSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 303 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
+.+++...... ......+...+..++|+|||++|+++ + +.|++||+.+++.+
T Consensus 213 ~~~~~~~~v~~~d~~~~~~~-----------~~~~~~~~~~~~~~~~s~dg~~l~~~-----~---~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 213 DPTAYRTGLLTMDLETGEMA-----------MREVRIMDVFYFSTAVNPAKTRAFGA-----Y---NVLESFDLEKNASI 273 (337)
T ss_dssp SGGGEEEEEEEEETTTCCEE-----------EEEEEECSSCEEEEEECTTSSEEEEE-----E---SEEEEEETTTTEEE
T ss_pred cccccccceEEEeCCCCCce-----------EeecCCCCCceeeEEECCCCCEEEEe-----C---CeEEEEECCCCcCc
Confidence 33333222100 00111223367889999999999885 2 45999999987765
Q ss_pred EEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 374 SLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
...+.+ ..+.+++|.|+ |..|.++..++.|.+|++
T Consensus 274 ~~~~~~--------~~~~~~~~s~d---g~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 274 KRVPLP--------HSYYSVNVSTD---GSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEECS--------SCCCEEEECTT---SCEEEEESBSSEEEEEET
T ss_pred ceecCC--------CceeeEEECCC---CCEEEEEcCCCcEEEEEC
Confidence 433211 23568899886 667777888999999986
No 150
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=2.9e-16 Score=146.85 Aligned_cols=262 Identities=10% Similarity=0.066 Sum_probs=158.4
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEcc-CCCCcceee-ccCCcCCeeEEEEccCCCc-eEEEe--------------c
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYE-DSGKDACIL-TSDSQRDVKVLEWRPNGGR-SLSVG--------------C 163 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~-~~~~~~~~~-~~~~~~~v~~l~~sp~~~~-~la~g--------------~ 163 (427)
.+..++|+|+|++|++++.+ .|.+|++. .+ ..... .....+.+.+++|+|+|+. +++++ .
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g--~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPT--EIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETT--EEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCC--CEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 46789999999999988887 99999997 44 22211 1111123667899999954 34444 3
Q ss_pred CCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEE
Q 014302 164 KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILK 243 (427)
Q Consensus 164 ~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~ 243 (427)
++.+.+|+++..+. ....+..+ . ..+...+..++
T Consensus 118 ~g~v~v~~~~~~g~---------------------~~~~~~~~-----------~--------------~~~~~~~~~~~ 151 (365)
T 1jof_A 118 AGYGNVFSVSETGK---------------------LEKNVQNY-----------E--------------YQENTGIHGMV 151 (365)
T ss_dssp CCEEEEEEECTTCC---------------------EEEEEEEE-----------E--------------CCTTCCEEEEE
T ss_pred CceEEEEccCCCCc---------------------CcceEeeE-----------E--------------eCCCCcceEEE
Confidence 57889999861110 00000000 0 01234678899
Q ss_pred EccCCCEEEEEe-cCCcEEEEEcC-CCCcccc--c---cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccc
Q 014302 244 WSPTGDYFFAAK-FDGTFYLWETN-TWTSEPW--S---STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDA 316 (427)
Q Consensus 244 ~sp~g~~l~~~~-~dg~v~iwd~~-~~~~~~~--~---~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~ 316 (427)
|+|||++|+++. .++.|++||+. +++.... . .+...+..++|+|||++|+++...++.+.+|++......+..
T Consensus 152 ~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 231 (365)
T 1jof_A 152 FDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVY 231 (365)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred ECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEE
Confidence 999999988665 36799999998 5554221 1 135678999999999999888776678877776532221110
Q ss_pred --cccccccccceeeccCC-------ceeEEE-ECCCCCEEEEEEecCCCcceeEEEEEEec-cCceEEEeeeeeeeCCC
Q 014302 317 --HLLPVDLPDIVSLTGSQ-------GIEKIA-WDASGERLAVSYKGGDDIYKGLIAIYDAR-RTPLISLSLIGFIRGPG 385 (427)
Q Consensus 317 --~~~~~~~~~~~~~~~~~-------~i~~v~-~sp~g~~La~~~~~~~d~~~g~i~vwd~~-~~~~~~~~~~~~~~~~~ 385 (427)
.... .++.. ..... .+..++ |+|||++|+++..+.+....+.|.+|++. ++.+..+. ..+....
T Consensus 232 ~~~~~~-~~~~~--~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~--~~~~~~~ 306 (365)
T 1jof_A 232 THHSFP-LIPPG--IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL--FLSPTPT 306 (365)
T ss_dssp EEEEEE-SSCTT--CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE--EEEECSS
T ss_pred ccceEE-cCCCC--cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEee--eeeecCC
Confidence 0000 00000 00111 478999 99999999886544321011369999996 55543221 1122222
Q ss_pred CCCCceeEEeccC-CCCCceeEEEee-CceEEEEec
Q 014302 386 DNPKPVAFSFHDK-FKQGPLLSVCWS-SGFCCTYPL 419 (427)
Q Consensus 386 ~~~~~~~~~f~~~-~~~g~~l~v~~~-~g~i~~~~~ 419 (427)
.. +..++|.|. + +|..|+++.. ++.|.+|++
T Consensus 307 ~~--~~~~a~sp~~~-dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 307 SG--GHSNAVSPCPW-SDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp CC--TTCCCEEECTT-CTTEEEEECSSSCEEEEEEE
T ss_pred CC--cccceecCCCc-CCCEEEEEEcCCCeEEEEEE
Confidence 22 345667772 1 3667777765 589999975
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=3.5e-16 Score=145.08 Aligned_cols=211 Identities=13% Similarity=0.133 Sum_probs=135.1
Q ss_pred ceeeeEEcCCCCEEEEEe-CCCeEEEEEccCCCCcceeeccC----------CcCCeeEEEEccCCCceEEEec-CCeEE
Q 014302 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSGKDACILTSD----------SQRDVKVLEWRPNGGRSLSVGC-KGGIC 168 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~-~d~~v~vwd~~~~~~~~~~~~~~----------~~~~v~~l~~sp~~~~~la~g~-~~~i~ 168 (427)
.+..++|+|+|++|++++ .++.|++|++...+......... +...+.+++|+|+|+ ++++.. ++.|.
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~ 165 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVY 165 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEE
Confidence 578899999999888887 67999999996432111111111 123488899999996 766665 47899
Q ss_pred EEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCC
Q 014302 169 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTG 248 (427)
Q Consensus 169 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g 248 (427)
+|++...+ ...... .+.. ........++|+|||
T Consensus 166 ~~~~~~~g----------------------~~~~~~-----------~~~~--------------~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 166 VYNVSDAG----------------------QLSEQS-----------VLTM--------------EAGFGPRHLVFSPDG 198 (347)
T ss_dssp EEEECTTS----------------------CEEEEE-----------EEEC--------------CTTCCEEEEEECTTS
T ss_pred EEEECCCC----------------------cEEEee-----------eEEc--------------CCCCCCceEEECCCC
Confidence 99986111 000000 0000 012245679999999
Q ss_pred CEEEE-EecCCcEEEEEcCC--CCccc---cccC------CCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccc
Q 014302 249 DYFFA-AKFDGTFYLWETNT--WTSEP---WSST------SGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDA 316 (427)
Q Consensus 249 ~~l~~-~~~dg~v~iwd~~~--~~~~~---~~~~------~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~ 316 (427)
++|++ +..++.|++|++.. ++... .... ...+..++|+|||++|+++...++.+.+|++... +
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~-----g 273 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD-----G 273 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG-----G
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC-----C
Confidence 97774 56788999999875 33211 1111 1458889999999999777776778888887632 0
Q ss_pred cccccccccceeec-cCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEe--ccCceEE
Q 014302 317 HLLPVDLPDIVSLT-GSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDA--RRTPLIS 374 (427)
Q Consensus 317 ~~~~~~~~~~~~~~-~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~--~~~~~~~ 374 (427)
... ....+. +...+..++|+|||++|+++.. .+ +.|.+|++ .++.+..
T Consensus 274 ~~~-----~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~---~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 274 HLT-----LIQQISTEGDFPRDFDLDPTEAFVVVVNQ--NT---DNATLYARDLTSGKLSL 324 (347)
T ss_dssp CEE-----EEEEEECSSSCCCEEEECTTSSEEEEEET--TT---TEEEEEEECTTTCCEEE
T ss_pred cEE-----EeEEEecCCCCcCeEEECCCCCEEEEEEc--CC---CcEEEEEEeCCCCeEEe
Confidence 000 011111 2336789999999999988633 33 45999955 5566553
No 152
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=1.2e-16 Score=150.39 Aligned_cols=280 Identities=11% Similarity=0.036 Sum_probs=158.1
Q ss_pred eeEEcCCCCEEEEEeC-CCe--EEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 104 GVSWHQHKHIVAFISG-STQ--VIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 104 ~l~~sp~g~~lat~~~-d~~--v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
..+|||||++||+++. ++. |.+||+..+ ....+...+...+..++|+|||+.++.+..+..+.+|++.. +....
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g--~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-g~~~~ 116 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQ--VATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLAT-LEENV 116 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTC--EEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTT-CCEEE
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCC--ceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCC-Cccee
Confidence 3789999999999887 674 666676655 55555566666666789999996555555568899999872 21110
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeee--EeCCCCCCcc-------------------------------
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITAL--SWGPDGRFPG------------------------------- 227 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~spdg~~l~------------------------------- 227 (427)
+ ...+ ...+... .++|+|+++.
T Consensus 117 ~------------------------~~~~-~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (388)
T 3pe7_A 117 V------------------------YQVP-AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM 171 (388)
T ss_dssp E------------------------EECC-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred e------------------------eech-hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEE
Confidence 0 0000 1111111 1133333221
Q ss_pred -----cC--ceEEeccCCeEEEEEcc-CCCEEEEEecC------CcEEEEEcCCCCccccccCC--CCeeEEEECCCCCE
Q 014302 228 -----LG--TPIRRGFGGLSILKWSP-TGDYFFAAKFD------GTFYLWETNTWTSEPWSSTS--GFVTGATWDPEGRM 291 (427)
Q Consensus 228 -----~~--~~~~~~~~~v~~~~~sp-~g~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~--~~v~~v~~spdg~~ 291 (427)
.+ ..+..+...+..++|+| ||+.|+....+ ..|+++|+.......+..+. ..+..++|+|||+.
T Consensus 172 ~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 172 RVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp EEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSC
T ss_pred EEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCE
Confidence 11 12233455688899999 99999865543 36888887766554444333 35788999999998
Q ss_pred EEEEEcCCc----eeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEec------CCCcceeE
Q 014302 292 ILLAFAGSL----TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKG------GDDIYKGL 361 (427)
Q Consensus 292 l~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~------~~d~~~g~ 361 (427)
|++.+...+ .+++|++....... . ...+...... .....++|+|||++|++.... ..+ ..
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~---l--~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~~~~~~---~~ 321 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQ---L--TSMPACSHLM--SNYDGSLMVGDGSDAPVDVQDDSGYKIEND---PF 321 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEE---E--EEECCEEEEE--ECTTSSEEEEEECCC------------CCC---CE
T ss_pred EEEEecCCCCCcceEEEEecCCCceEE---E--EcCCCceeee--ecCCCCeEccCCCcceeEeeeccccccCCC---CE
Confidence 877655432 27777766542110 0 0000000000 011234799999999875321 222 56
Q ss_pred EEEEEeccCceEEEeeeee----eeCCCCCCCceeEEeccCCCCCceeE-EEeeCceEEEEeccccCCC
Q 014302 362 IAIYDARRTPLISLSLIGF----IRGPGDNPKPVAFSFHDKFKQGPLLS-VCWSSGFCCTYPLIFRSHL 425 (427)
Q Consensus 362 i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~f~~~~~~g~~l~-v~~~~g~i~~~~~~~~~~~ 425 (427)
|++||+.++....+..... +.+ .......+++|.|+ |..|+ ....+|..++|-+-.+++.
T Consensus 322 i~~~d~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~spD---g~~l~~~s~~~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 322 LYVFNMKNGTQHRVARHDTSWKVFEG-DRQVTHPHPSFTPD---DKQILFTSDVHGKPALYLATLPESV 386 (388)
T ss_dssp EEEEETTTTEEEEEEECCCCCCCBTT-BSSTTCCCCEECTT---SSEEEEEECTTSSCEEEEEECCGGG
T ss_pred EEEEeccCCceEEeccccCccccccc-ccccCCCCccCCCC---CCEEEEEecCCCceeEEEEECChhc
Confidence 9999999887654432211 000 00001345678876 55454 4445888888887666543
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=2.8e-16 Score=166.81 Aligned_cols=271 Identities=11% Similarity=0.054 Sum_probs=176.1
Q ss_pred ceeeeEEc-CCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcC-CeeEEEEccCCCceEEEecCCeEE-EEeccCCCC
Q 014302 101 DLQGVSWH-QHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQR-DVKVLEWRPNGGRSLSVGCKGGIC-IWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~s-p~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~-~v~~l~~sp~~~~~la~g~~~~i~-iw~~~~~~~ 177 (427)
.+.+++|| |||++||+++ ++.+.+|+.... ... ....|.. .+.+++|+ ||+.++.++.+..+. +|++.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~--~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~---- 367 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT--YVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR---- 367 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSS--BEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT----
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCC--ceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC----
Confidence 58899999 9999999987 889999988765 222 3345666 89999999 985555555556676 77775
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC--------------ce---EEeccCCeE
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG--------------TP---IRRGFGGLS 240 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--------------~~---~~~~~~~v~ 240 (427)
.+ . ... +.. ....+..++|+|||++++.+ .. ...|...+.
T Consensus 368 -----~~--------------~--~~~-l~~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~ 424 (1045)
T 1k32_A 368 -----TG--------------K--AEK-FEE-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMIT 424 (1045)
T ss_dssp -----TC--------------C--EEE-CCC-CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC
T ss_pred -----CC--------------C--ceE-ecC-CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCcc
Confidence 11 1 111 222 25778999999999985422 11 124566788
Q ss_pred EEEEccCCCEEEEEecCC----------cEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCC
Q 014302 241 ILKWSPTGDYFFAAKFDG----------TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 310 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~dg----------~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~ 310 (427)
.++|||||++|++++.++ .|++||+.+++...+..+...+..++|+|||++|++++... ....|..+..
T Consensus 425 ~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~-~~~~~~~~~~ 503 (1045)
T 1k32_A 425 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS-LDPSPDRVVL 503 (1045)
T ss_dssp CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC-CCCEECSSSS
T ss_pred ceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc-CCcCcchhcc
Confidence 999999999999766544 89999999877555567778889999999999999876544 3333332211
Q ss_pred CC-------------------C--cccccc-----cccccc----ceeec-cCCceeEEEECCCCCEEEEEEe-c-----
Q 014302 311 PP-------------------S--LDAHLL-----PVDLPD----IVSLT-GSQGIEKIAWDASGERLAVSYK-G----- 353 (427)
Q Consensus 311 ~~-------------------~--~~~~~~-----~~~~~~----~~~~~-~~~~i~~v~~sp~g~~La~~~~-~----- 353 (427)
.. . +..... .+++.. ...+. +.+.+..++++|||+++++... +
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~ 583 (1045)
T 1k32_A 504 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 583 (1045)
T ss_dssp CEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHH
T ss_pred ccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccc
Confidence 00 0 000000 011111 11122 3457899999999987775100 0
Q ss_pred -CCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 354 -GDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 354 -~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
........|.+||+.++....+. ..+..++|.|+ |..|+++ +++.|.+|++
T Consensus 584 ~~~~~~~~~l~~~d~~~~~~~~l~-----------~~v~~~~~S~D---G~~l~~~-~~~~i~~~d~ 635 (1045)
T 1k32_A 584 YQGAPEKGVLLKYDVKTRKVTEVK-----------NNLTDLRLSAD---RKTVMVR-KDDGKIYTFP 635 (1045)
T ss_dssp HHCCCCCEEEEEEETTTCCEEEEE-----------EEEEEEEECTT---SCEEEEE-ETTSCEEEEE
T ss_pred ccccCCCceEEEEECCCCcEEEee-----------cCcceEEECCC---CCEEEEE-cCCcEEEEeC
Confidence 01111267999999888764332 11336678775 7778887 4558999986
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=1.5e-16 Score=162.36 Aligned_cols=267 Identities=14% Similarity=0.154 Sum_probs=157.0
Q ss_pred eeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcC---CeeEEEEccCCCceEEEec---------CCeEEEEe
Q 014302 104 GVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQR---DVKVLEWRPNGGRSLSVGC---------KGGICIWA 171 (427)
Q Consensus 104 ~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~---~v~~l~~sp~~~~~la~g~---------~~~i~iw~ 171 (427)
+++|+|+|+++++ +.|++|++||+..+ ....+...|.. .+.+++|||||+.++.++. ++.+.+|+
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETG--QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSC--CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCC--cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 6799999976555 46999999999887 34444444432 4899999999954444433 47899999
Q ss_pred ccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC-------------ceEEe----
Q 014302 172 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG-------------TPIRR---- 234 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~-------------~~~~~---- 234 (427)
+. ++ +......+ ...+..++|||||+.++.. ...+.
T Consensus 97 ~~---------~g--------------~~~~~~~l----~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~ 149 (719)
T 1z68_A 97 LS---------NG--------------EFVRGNEL----PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNG 149 (719)
T ss_dssp TT---------TT--------------EECCSSCC----CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCC
T ss_pred CC---------CC--------------ccccceec----CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCC
Confidence 87 22 11000111 2457889999999986522 11111
Q ss_pred ccC-----------------CeEEEEEccCCCEEEEEecCC----------------------------------cEEEE
Q 014302 235 GFG-----------------GLSILKWSPTGDYFFAAKFDG----------------------------------TFYLW 263 (427)
Q Consensus 235 ~~~-----------------~v~~~~~sp~g~~l~~~~~dg----------------------------------~v~iw 263 (427)
+.. ....++|||||++|++++.|. .|++|
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~ 229 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFII 229 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEE
Confidence 111 114799999999999776542 78899
Q ss_pred EcCCCCcc---c------cccCCCCeeEEEECCCCCEEEEEEcCC---ceeeeee----eCCCCCCccccccccccccce
Q 014302 264 ETNTWTSE---P------WSSTSGFVTGATWDPEGRMILLAFAGS---LTLGSIH----FASKPPSLDAHLLPVDLPDIV 327 (427)
Q Consensus 264 d~~~~~~~---~------~~~~~~~v~~v~~spdg~~l~~~~~~~---~~i~~~~----~~~~~~~~~~~~~~~~~~~~~ 327 (427)
|+.+++.. . +..+...+.+++||||++.+++..... ..|++|+ ...... ..+ ....
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~------~~~--~~~~ 301 (719)
T 1z68_A 230 DTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC------PKT--QEHI 301 (719)
T ss_dssp ESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC------CGG--GEEE
T ss_pred ECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce------EEE--Eecc
Confidence 99876642 1 225777899999999987666543322 2466666 322211 000 0000
Q ss_pred eeccCCcee-----EEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCC
Q 014302 328 SLTGSQGIE-----KIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQG 402 (427)
Q Consensus 328 ~~~~~~~i~-----~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g 402 (427)
...+.+.+. .++|+|||+.|+..... .++. ..|.+|++.++....++. ... ....+.+. + .+
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~g~-~~l~~~~~~~~~~~~lt~------~~~--~v~~~~~~-d--~~ 368 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAISYYKIFSD-KDGY-KHIHYIKDTVENAIQITS------GKW--EAINIFRV-T--QD 368 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSCEEEEEEC-TTSC-EEEEEESSCSTTCEECSC------SSS--CEEEEEEE-C--SS
T ss_pred cccCCceEccccCCccEECCCCCeEEEEEEc-cCCc-eEEEEEECCCCceEeccc------Cce--EEEEEEEE-e--CC
Confidence 011222444 78999999977653222 2212 568888887766443321 111 12233343 2 24
Q ss_pred ceeEEEee----CceEEEEeccc
Q 014302 403 PLLSVCWS----SGFCCTYPLIF 421 (427)
Q Consensus 403 ~~l~v~~~----~g~i~~~~~~~ 421 (427)
.++..+.. ++.+++|.+-.
T Consensus 369 ~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 369 SLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEEEecCCCCCceEEEEEEeC
Confidence 44544433 47788887655
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=7e-16 Score=157.82 Aligned_cols=237 Identities=14% Similarity=0.215 Sum_probs=145.3
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcC-----CeeEEEEccCCCceEEEecC---------CeE
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQR-----DVKVLEWRPNGGRSLSVGCK---------GGI 167 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~-----~v~~l~~sp~~~~~la~g~~---------~~i 167 (427)
..+++|+|||++|+++ |++|++||+.++ ....+...|.. ...+++|||||+.++.+..+ +.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 4578999999999886 999999999887 33444444432 22458999999544444432 456
Q ss_pred EEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC-------------ceEEe
Q 014302 168 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG-------------TPIRR 234 (427)
Q Consensus 168 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~-------------~~~~~ 234 (427)
.+||+. ++ ... .+..+ ...+..++|||||+.++-. ...+.
T Consensus 95 ~~~d~~---------~~----------------~~~-~l~~~-~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 95 DIYDLN---------KR----------------QLI-TEERI-PNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp EEEETT---------TT----------------EEC-CSSCC-CTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEEC
T ss_pred EEEECC---------CC----------------cEE-EcccC-CCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEE
Confidence 689987 22 111 13332 4568899999999986521 11111
Q ss_pred ----cc-----------------CCeEEEEEccCCCEEEEEecCC-----------------------------------
Q 014302 235 ----GF-----------------GGLSILKWSPTGDYFFAAKFDG----------------------------------- 258 (427)
Q Consensus 235 ----~~-----------------~~v~~~~~sp~g~~l~~~~~dg----------------------------------- 258 (427)
+. +....+.|||||++||..+.|.
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~ 227 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPT 227 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCE
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCe
Confidence 11 1113488999999999664322
Q ss_pred -cEEEEEcCC---CC---ccccc------cCCCCeeEEEECCCCCEEEEEEcCC---ceeeeeeeCCCCCCccccccccc
Q 014302 259 -TFYLWETNT---WT---SEPWS------STSGFVTGATWDPEGRMILLAFAGS---LTLGSIHFASKPPSLDAHLLPVD 322 (427)
Q Consensus 259 -~v~iwd~~~---~~---~~~~~------~~~~~v~~v~~spdg~~l~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~ 322 (427)
.|++||+.+ ++ ...+. .+...+..++|||||+.+++..... ..|+++++......... . .
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~--~--~ 303 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC--L--V 303 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE--C--G
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce--e--E
Confidence 478889887 63 22222 2677899999999999777655443 35677776654310000 0 0
Q ss_pred cccceeeccCCc-----eeEEEECCCCCEEE-EEEecCCCcceeEEEEEEeccCceEEEe
Q 014302 323 LPDIVSLTGSQG-----IEKIAWDASGERLA-VSYKGGDDIYKGLIAIYDARRTPLISLS 376 (427)
Q Consensus 323 ~~~~~~~~~~~~-----i~~v~~sp~g~~La-~~~~~~~d~~~g~i~vwd~~~~~~~~~~ 376 (427)
........+.+. ...++|+|||+.|+ ..+..+.. ..|++|++.++....++
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~---~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGY---RHICYFQIDKKDCTFIT 360 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSC---EEEEEEETTCSSCEESC
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCc---eEEEEEECCCCceEecc
Confidence 000000111122 23788999999988 53222222 67999999887765443
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=1.9e-16 Score=167.99 Aligned_cols=271 Identities=14% Similarity=0.121 Sum_probs=176.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.+.++.|+++ .++++++.|++++||.++........+ ..|. .+..++|+||| ..|+.+.++.|.+|++. .....
T Consensus 205 ~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l-~~~~-~~~~~~~SpDG-~~la~~~~~~i~~~d~~-~~~l~- 278 (1045)
T 1k32_A 205 HVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKH-TSFT-DYYPRHLNTDG-RRILFSKGGSIYIFNPD-TEKIE- 278 (1045)
T ss_dssp CCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEEC-CCCC-SSCEEEEEESS-SCEEEEETTEEEEECTT-TCCEE-
T ss_pred cccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEe-cCCC-CcceeeEcCCC-CEEEEEeCCEEEEecCC-ceEee-
Confidence 6889999988 666777788999999887643223222 2333 46778999999 56666678999999874 11100
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeC-CCCCCcccCc-------------e--EEeccC-CeEEEE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWG-PDGRFPGLGT-------------P--IRRGFG-GLSILK 243 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-pdg~~l~~~~-------------~--~~~~~~-~v~~~~ 243 (427)
.+....... ...... ....+..++|+ |||+.++... . +..+.. .+..++
T Consensus 279 ----------~l~~~~~~~---~~~~~~-~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1045)
T 1k32_A 279 ----------KIEIGDLES---PEDRII-SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRG 344 (1045)
T ss_dssp ----------ECCCCCCCB---CCSEEE-ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEEC
T ss_pred ----------eeccCcccc---cccccc-cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeee
Confidence 000000000 000001 13468899999 9998754221 1 112334 678899
Q ss_pred EccCCCEEEEEecCCcEE-EEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccc
Q 014302 244 WSPTGDYFFAAKFDGTFY-LWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVD 322 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~-iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 322 (427)
|+ ||+.|+.++.++.++ +||+.+++...+..+...+..++|+|||++|++++.+ +.+++|++......
T Consensus 345 ~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~-~~v~~~d~~tg~~~--------- 413 (1045)
T 1k32_A 345 GD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR-FEIMTVDLETGKPT--------- 413 (1045)
T ss_dssp SS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEE---------
T ss_pred Ec-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCC-CeEEEEECCCCceE---------
Confidence 99 999999888888888 9999887765555777889999999999999987654 48888887654210
Q ss_pred cccceee-ccCCceeEEEECCCCCEEEEEEecC----CCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEecc
Q 014302 323 LPDIVSL-TGSQGIEKIAWDASGERLAVSYKGG----DDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHD 397 (427)
Q Consensus 323 ~~~~~~~-~~~~~i~~v~~sp~g~~La~~~~~~----~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 397 (427)
... .+.+.+.+++|||||++||++.... .....+.|++||+.++....+. .. ......++|.|
T Consensus 414 ----~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~------~~--~~~~~~~~~sp 481 (1045)
T 1k32_A 414 ----VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT------TE--NSHDYAPAFDA 481 (1045)
T ss_dssp ----EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS------CS--SSBEEEEEECT
T ss_pred ----EeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee------CC--CcccCCceEcC
Confidence 011 2334779999999999998864432 0011267999999887644222 11 11244677888
Q ss_pred CCCCCceeEEEeeCceEEEE
Q 014302 398 KFKQGPLLSVCWSSGFCCTY 417 (427)
Q Consensus 398 ~~~~g~~l~v~~~~g~i~~~ 417 (427)
+ |..|+++..++....|
T Consensus 482 d---G~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 482 D---SKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp T---SCEEEEEESCCCCCEE
T ss_pred C---CCEEEEEecccCCcCc
Confidence 6 6677777665554443
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=1.3e-15 Score=140.93 Aligned_cols=247 Identities=11% Similarity=0.006 Sum_probs=154.2
Q ss_pred eeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeecc-CCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCccc
Q 014302 103 QGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTS-DSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAAS 180 (427)
Q Consensus 103 ~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~~ 180 (427)
+.+++++++.++++++.+++|++||..+. +...... .....+..++|+|+++.+++++. ++.|.+|++.
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~------- 73 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASD--TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD------- 73 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTT--EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT-------
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCC--cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC-------
Confidence 35678899999999999999999999876 2322222 22225789999999955555554 4889999986
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC---
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD--- 257 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d--- 257 (427)
++ .....+... .. + .. ....+..++|+|+|++|++++.+
T Consensus 74 --t~----------------~~~~~~~~~-~~--------~---------~~--~~~~~~~~~~spdg~~l~~~~~~~~~ 115 (349)
T 1jmx_B 74 --TC----------------KNTFHANLS-SV--------P---------GE--VGRSMYSFAISPDGKEVYATVNPTQR 115 (349)
T ss_dssp --TT----------------EEEEEEESC-CS--------T---------TE--EEECSSCEEECTTSSEEEEEEEEEEE
T ss_pred --CC----------------cEEEEEEcc-cc--------c---------cc--ccccccceEECCCCCEEEEEcccccc
Confidence 11 111111100 00 0 00 01236678999999999977755
Q ss_pred ---------CcEEEEEcCCCCccc---cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Cccccc-----
Q 014302 258 ---------GTFYLWETNTWTSEP---WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHL----- 318 (427)
Q Consensus 258 ---------g~v~iwd~~~~~~~~---~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~----- 318 (427)
+.|.+||+.+++... ...+...+.+++|+|||+ ++++ +. .+++|+..+... .+....
T Consensus 116 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~~~ 191 (349)
T 1jmx_B 116 LNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA-GP--DIYKMDVKTGKYTVALPLRNWNRKG 191 (349)
T ss_dssp CSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE-SS--SEEEECTTTCCEEEEECSTTCCCTT
T ss_pred cccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc-cC--cEEEEeCCCCceeccccccccCCcc
Confidence 899999998754322 223445688999999999 5553 22 366666554321 111000
Q ss_pred --------------------ccc------------------------ccc--cc---eeeccCCceeEEEECC-CCCEEE
Q 014302 319 --------------------LPV------------------------DLP--DI---VSLTGSQGIEKIAWDA-SGERLA 348 (427)
Q Consensus 319 --------------------~~~------------------------~~~--~~---~~~~~~~~i~~v~~sp-~g~~La 348 (427)
.+. +.. .. ........+..++|+| +|++|+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~ 271 (349)
T 1jmx_B 192 YSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIY 271 (349)
T ss_dssp BCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEE
T ss_pred ccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEE
Confidence 000 000 00 0000123567889999 999998
Q ss_pred EEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 349 VSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 349 ~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
++ + +.|.+||+.+++.+...+.+ ..+.+++|.|+ |..|.++..++.|.+|+.
T Consensus 272 ~~-----~---~~v~~~d~~~~~~~~~~~~~--------~~~~~~~~s~d---g~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 272 GV-----L---NRLAKYDLKQRKLIKAANLD--------HTYYCVAFDKK---GDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp EE-----E---SEEEEEETTTTEEEEEEECS--------SCCCEEEECSS---SSCEEEESBSSEEEEEET
T ss_pred EE-----c---CeEEEEECccCeEEEEEcCC--------CCccceEECCC---CCEEEEecCCCeEEEEec
Confidence 84 2 56999999988765433211 12558899886 556677888899999985
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.68 E-value=2.1e-15 Score=138.68 Aligned_cols=224 Identities=13% Similarity=0.063 Sum_probs=144.3
Q ss_pred eeeeEEcCCCCEEE-EEeCCCeEEEEEccCCCCcceeeccCC----cCCeeEEEEccCCCceEEEe------------cC
Q 014302 102 LQGVSWHQHKHIVA-FISGSTQVIVRDYEDSGKDACILTSDS----QRDVKVLEWRPNGGRSLSVG------------CK 164 (427)
Q Consensus 102 V~~l~~sp~g~~la-t~~~d~~v~vwd~~~~~~~~~~~~~~~----~~~v~~l~~sp~~~~~la~g------------~~ 164 (427)
+..++|+|+|++|+ ++..++.|.+||+.+... ...+...+ ...+.+++|+|+|+.++++. .+
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 67899999998664 555678999999887621 11222222 23678899999995444443 35
Q ss_pred CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCccc------------CceE
Q 014302 165 GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGL------------GTPI 232 (427)
Q Consensus 165 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~------------~~~~ 232 (427)
+.|.+|++. ++ .....+.. ...+..++|+|||+++.. +...
T Consensus 115 ~~i~v~d~~---------~~----------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 115 TRVALYDAE---------TL----------------SRRKAFEA--PRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLV 167 (337)
T ss_dssp CEEEEEETT---------TT----------------EEEEEEEC--CSSCCCEEECTTSSCEEEESSSEEEEETTTTEEE
T ss_pred ceEEEEECC---------CC----------------cEEEEEeC--CCCcceeEECCCCCEEEEeCCeEEEEECCCCcEe
Confidence 889999987 11 12222221 334678899999986432 1111
Q ss_pred Eec--cCCeEEEEEccCCCEEEEEec-CC-----------------------cEEEEEcCCCCccc--cccCCCCeeEEE
Q 014302 233 RRG--FGGLSILKWSPTGDYFFAAKF-DG-----------------------TFYLWETNTWTSEP--WSSTSGFVTGAT 284 (427)
Q Consensus 233 ~~~--~~~v~~~~~sp~g~~l~~~~~-dg-----------------------~v~iwd~~~~~~~~--~~~~~~~v~~v~ 284 (427)
... ......+.|+|+|++|+..+. ++ .|.+||+.+++... ...+...+.+++
T Consensus 168 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 247 (337)
T 1pby_B 168 EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA 247 (337)
T ss_dssp EEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEE
T ss_pred eeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEE
Confidence 111 010123368899987764432 22 46899998877642 225556788999
Q ss_pred ECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEE
Q 014302 285 WDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAI 364 (427)
Q Consensus 285 ~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~v 364 (427)
|+|||++++++ ++.+++|++.+... ...+..+..+.+++|+|+|++|+++ +.+ +.|++
T Consensus 248 ~s~dg~~l~~~---~~~v~~~d~~~~~~-------------~~~~~~~~~~~~~~~s~dg~~l~~~---~~~---~~i~v 305 (337)
T 1pby_B 248 VNPAKTRAFGA---YNVLESFDLEKNAS-------------IKRVPLPHSYYSVNVSTDGSTVWLG---GAL---GDLAA 305 (337)
T ss_dssp ECTTSSEEEEE---ESEEEEEETTTTEE-------------EEEEECSSCCCEEEECTTSCEEEEE---SBS---SEEEE
T ss_pred ECCCCCEEEEe---CCeEEEEECCCCcC-------------cceecCCCceeeEEECCCCCEEEEE---cCC---CcEEE
Confidence 99999999876 35777777654311 1111223467899999999999884 334 66999
Q ss_pred EEeccCceEEE
Q 014302 365 YDARRTPLISL 375 (427)
Q Consensus 365 wd~~~~~~~~~ 375 (427)
||+.+++.+..
T Consensus 306 ~d~~~~~~~~~ 316 (337)
T 1pby_B 306 YDAETLEKKGQ 316 (337)
T ss_dssp EETTTCCEEEE
T ss_pred EECcCCcEEEE
Confidence 99998877643
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.67 E-value=1.4e-13 Score=128.28 Aligned_cols=250 Identities=11% Similarity=0.111 Sum_probs=150.8
Q ss_pred cCCCCEEEEEe----CCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC----CeEEEEeccCCCCcc
Q 014302 108 HQHKHIVAFIS----GSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK----GGICIWAPSYPGNAA 179 (427)
Q Consensus 108 sp~g~~lat~~----~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~----~~i~iw~~~~~~~~~ 179 (427)
.+...++++|+ .++.|.+|.++........+...+...+..++|+||++.+++++.+ +.+.+|+++..
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~---- 85 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE---- 85 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT----
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC----
Confidence 34445666774 3578999988764222222222266778899999999545555543 68999998710
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEe-cCC
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAK-FDG 258 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~dg 258 (427)
++ ....+. ....+......+++ ++++|++++ .++
T Consensus 86 ---~g--------------~~~~~~--------------------------~~~~~~~~p~~~~~--dg~~l~~~~~~~~ 120 (361)
T 3scy_A 86 ---KG--------------TLHLLN--------------------------TQKTMGADPCYLTT--NGKNIVTANYSGG 120 (361)
T ss_dssp ---TT--------------EEEEEE--------------------------EEECSSSCEEEEEE--CSSEEEEEETTTT
T ss_pred ---CC--------------cEEEee--------------------------EeccCCCCcEEEEE--CCCEEEEEECCCC
Confidence 00 111111 01112234556666 888888655 688
Q ss_pred cEEEEEcCCCCcc-ccc--------------cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC----C-ccccc
Q 014302 259 TFYLWETNTWTSE-PWS--------------STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP----S-LDAHL 318 (427)
Q Consensus 259 ~v~iwd~~~~~~~-~~~--------------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~----~-~~~~~ 318 (427)
.|.+|++...... ... .+...+.+++|+|||++|+++...++.+.+|++..... . +....
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 9999999754331 110 11234578999999999888777677888888875421 1 11000
Q ss_pred cccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccC
Q 014302 319 LPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDK 398 (427)
Q Consensus 319 ~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 398 (427)
. ........+..+..++|+|||++|+++ +..+ +.|.+|++.++.+..+..... .+.....+..++|.|+
T Consensus 201 ~----~~~~~~~~~~~~~~~~~spdg~~l~v~--~~~~---~~v~v~~~~~g~~~~~~~~~~--~~~~~~~~~~i~~spd 269 (361)
T 3scy_A 201 T----PEAFKVAPGSGPRHLIFNSDGKFAYLI--NEIG---GTVIAFRYADGMLDEIQTVAA--DTVNAQGSGDIHLSPD 269 (361)
T ss_dssp E----EEEEECCTTCCEEEEEECTTSSEEEEE--ETTT---CEEEEEEEETTEEEEEEEEES--CSSCCCCEEEEEECTT
T ss_pred c----ccceecCCCCCCeEEEEcCCCCEEEEE--cCCC---CeEEEEEecCCceEEeEEEec--CCCCCCCcccEEECCC
Confidence 0 001112233467899999999999885 3233 569999998775533322211 1222233568999986
Q ss_pred CCCCceeEEEee--CceEEEEecc
Q 014302 399 FKQGPLLSVCWS--SGFCCTYPLI 420 (427)
Q Consensus 399 ~~~g~~l~v~~~--~g~i~~~~~~ 420 (427)
|..|.++.. ++.|.+|++-
T Consensus 270 ---g~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 270 ---GKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp ---SSEEEEEECSSSCEEEEEEEC
T ss_pred ---CCEEEEECCCCCCEEEEEEEc
Confidence 666656554 4899999874
No 160
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=9e-14 Score=128.68 Aligned_cols=211 Identities=11% Similarity=0.040 Sum_probs=138.9
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCCCCcceeeccCCc-C--------CeeEEEEccCCCceEEEe-c-CCeEE
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSGKDACILTSDSQ-R--------DVKVLEWRPNGGRSLSVG-C-KGGIC 168 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~~~~~~~~~~~~~-~--------~v~~l~~sp~~~~~la~g-~-~~~i~ 168 (427)
.+..++|+|+|++++++ ..++.|.+||..++ +.......+. . .+.+++|+|+++.+++++ . ++.|.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTG--EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTC--CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCC--eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 46789999999966554 55799999999876 2222222211 1 268899999996565555 2 47799
Q ss_pred EEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc--------------cCceEE-
Q 014302 169 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG--------------LGTPIR- 233 (427)
Q Consensus 169 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~--------------~~~~~~- 233 (427)
+||.. ++ .....+... ...+..++|+|+|+.+. .+....
T Consensus 168 ~~d~~---------~~----------------~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 168 VVDGG---------NI----------------KLKTAIQNT-GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp EEETT---------TT----------------EEEEEECCC-CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred EEcCC---------CC----------------ceEEEecCC-CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 99987 11 222222212 33467788888887532 111111
Q ss_pred --e----ccCCeEEEEEccCCCEEEEEec-CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeee
Q 014302 234 --R----GFGGLSILKWSPTGDYFFAAKF-DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIH 306 (427)
Q Consensus 234 --~----~~~~v~~~~~sp~g~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~ 306 (427)
. +...+..++|+|+|++|++++. ++.|.+||+.+++......... ...++|+|+|++++++...++.+.+|+
T Consensus 222 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 222 KKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-SLAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp EECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS-CCCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-CceEEECCCCCEEEEEECCCCeEEEEE
Confidence 1 2234667999999998885554 5899999998887644332222 357999999998888877777888888
Q ss_pred eCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEec
Q 014302 307 FASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKG 353 (427)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~ 353 (427)
..+... ...+.....+..++|+|||++|+++...
T Consensus 301 ~~~~~~-------------~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 301 AKSYKV-------------VKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTTEE-------------EEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCeE-------------EEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 765411 1112223467999999999988886544
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.62 E-value=1.7e-14 Score=147.12 Aligned_cols=232 Identities=14% Similarity=0.132 Sum_probs=139.1
Q ss_pred ceeeeEEcCCCCEEEEEeC---------CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEe
Q 014302 101 DLQGVSWHQHKHIVAFISG---------STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWA 171 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~---------d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~ 171 (427)
.|.+++|||||++||+++. ++.|++||+..+ .... .......+.+++||||| +.|+.+.++.|++|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~-~~~l~~~~~~~~~SPDG-~~la~~~~~~i~~~~ 136 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVR-GNELPRPIQYLCWSPVG-SKLAYVYQNNIYLKQ 136 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECC-SSCCCSSBCCEEECSST-TCEEEEETTEEEEES
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC--cccc-ceecCcccccceECCCC-CEEEEEECCeEEEEe
Confidence 3789999999999998876 689999999877 2200 01112468999999999 566777789999999
Q ss_pred ccCCCCccccccCcccccccccCCCCcceeEeehhccc--------CCCceeeeEeCCCCCCcccCc-------------
Q 014302 172 PSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQ--------NGEQITALSWGPDGRFPGLGT------------- 230 (427)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~spdg~~l~~~~------------- 230 (427)
+.. +....+... +.... .+.++ .......++|+|||+.++...
T Consensus 137 ~~~-g~~~~l~~~-----------~~~~~----v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 137 RPG-DPPFQITFN-----------GRENK----IFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp STT-SCCEECCCC-----------CBTTT----EEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEE
T ss_pred CCC-CCcEEEecC-----------CCcCC----eEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeec
Confidence 861 111110000 00000 00000 012235899999998765321
Q ss_pred ------------------------eEE----------------------eccCCeEEEEEccCCCEEEEEecCC----cE
Q 014302 231 ------------------------PIR----------------------RGFGGLSILKWSPTGDYFFAAKFDG----TF 260 (427)
Q Consensus 231 ------------------------~~~----------------------~~~~~v~~~~~sp~g~~l~~~~~dg----~v 260 (427)
.+. .+...+..++||||++.+++....+ .|
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 000 1223468899999987776644332 48
Q ss_pred EEEE----cCCCCccccc-----cCCCCee-----EEEECCCCCEEEEE-EcCCc--eeeeeeeCCCCCCcccccccccc
Q 014302 261 YLWE----TNTWTSEPWS-----STSGFVT-----GATWDPEGRMILLA-FAGSL--TLGSIHFASKPPSLDAHLLPVDL 323 (427)
Q Consensus 261 ~iwd----~~~~~~~~~~-----~~~~~v~-----~v~~spdg~~l~~~-~~~~~--~i~~~~~~~~~~~~~~~~~~~~~ 323 (427)
++|| +.+++..... .+...+. .+.|+|||+.+++. +..++ .|+.+++..... .
T Consensus 281 ~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~------~---- 350 (719)
T 1z68_A 281 SICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA------I---- 350 (719)
T ss_dssp EEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC------E----
T ss_pred EEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce------E----
Confidence 8899 7776664443 4566666 89999999977663 33333 455555433210 0
Q ss_pred ccceeeccCCceeEEEECCCCCEEEEEEec--CCCcceeEEEEEEecc
Q 014302 324 PDIVSLTGSQGIEKIAWDASGERLAVSYKG--GDDIYKGLIAIYDARR 369 (427)
Q Consensus 324 ~~~~~~~~~~~i~~v~~sp~g~~La~~~~~--~~d~~~g~i~vwd~~~ 369 (427)
....+...+..+.++ +++.|+.+... ..+ +.++||.+..
T Consensus 351 ---~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~---~~~~l~~~~~ 391 (719)
T 1z68_A 351 ---QITSGKWEAINIFRV-TQDSLFYSSNEFEEYP---GRRNIYRISI 391 (719)
T ss_dssp ---ECSCSSSCEEEEEEE-CSSEEEEEESCGGGCT---TCBEEEEEEC
T ss_pred ---ecccCceEEEEEEEE-eCCEEEEEEecCCCCC---ceEEEEEEeC
Confidence 001122256777777 88888876433 112 4478888754
No 162
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.62 E-value=9.5e-14 Score=130.70 Aligned_cols=293 Identities=10% Similarity=-0.020 Sum_probs=154.4
Q ss_pred eeeeEEcCCCCEEEEEeCC---CeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 102 LQGVSWHQHKHIVAFISGS---TQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d---~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
+..++|+|||++||..... ..+.+|++..+ ....+...+......+.|+|||+.++.++.++.+.+|++. .+..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~--~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~-~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQ--QAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLE-TLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTT--EEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETT-TCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCC--cEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECC-CCCc
Confidence 5678999999998877543 36777777665 3333333333333448899999655566666789999986 2221
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccC--CCceeeeEeCCCCCCcc-------------------cCc--eEEec
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQN--GEQITALSWGPDGRFPG-------------------LGT--PIRRG 235 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~spdg~~l~-------------------~~~--~~~~~ 235 (427)
..+.... ......-..+....... ......+.|+|+|+.++ .+. .+..+
T Consensus 115 ~~~~~~~--------~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~ 186 (396)
T 3c5m_A 115 QVIYTVD--------EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD 186 (396)
T ss_dssp EEEEECC--------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE
T ss_pred EEEEecc--------cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC
Confidence 1111100 00000000000000000 00000145666665422 111 12234
Q ss_pred cCCeEEEEEcc-CCCEEEEEecC------CcEEEEEcCCCCccccccC--CCCeeEEEECCCCCEEEEEEcCC----cee
Q 014302 236 FGGLSILKWSP-TGDYFFAAKFD------GTFYLWETNTWTSEPWSST--SGFVTGATWDPEGRMILLAFAGS----LTL 302 (427)
Q Consensus 236 ~~~v~~~~~sp-~g~~l~~~~~d------g~v~iwd~~~~~~~~~~~~--~~~v~~v~~spdg~~l~~~~~~~----~~i 302 (427)
...+..+.|+| +++.|+..+.+ ..|++||+...+...+..+ ...+..++|+|||++|++++... ..+
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 45678899999 88877755443 3588888876654433332 23578899999999888775542 236
Q ss_pred eeeeeCCCCCCccccccccccccceeeccCCceeEEEECC-CCCEEEEEEecC----C------CcceeEEEEEEeccCc
Q 014302 303 GSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDA-SGERLAVSYKGG----D------DIYKGLIAIYDARRTP 371 (427)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp-~g~~La~~~~~~----~------d~~~g~i~vwd~~~~~ 371 (427)
++|++....... + .. .. ... +.|+| ||++|+++.... . ......|++||+.++.
T Consensus 267 ~~~d~~~g~~~~------l-----~~--~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 267 YKANPETLENEE------V-----MV--MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp EEECTTTCCEEE------E-----EE--CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred EEEECCCCCeEE------e-----ee--CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 666654431100 0 00 01 123 89999 999888743110 0 0011569999998876
Q ss_pred eEEEeeeee-ee--CCCCCCCceeEEeccCCCCCceeEEE-eeCceEEEEeccccC
Q 014302 372 LISLSLIGF-IR--GPGDNPKPVAFSFHDKFKQGPLLSVC-WSSGFCCTYPLIFRS 423 (427)
Q Consensus 372 ~~~~~~~~~-~~--~~~~~~~~~~~~f~~~~~~g~~l~v~-~~~g~i~~~~~~~~~ 423 (427)
...+..... +. ..........++|.|+ |..|+++ ..+|...+|-+-..+
T Consensus 332 ~~~l~~~~~~~~~~~~~~~~~~~~~~~s~d---g~~l~~~s~~~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 332 AQKLCKHSTSWDVLDGDRQITHPHPSFTPN---DDGVLFTSDFEGVPAIYIADVPE 384 (396)
T ss_dssp CCEEEECCCCCCCBTTBSSTTCCCCEECTT---SSEEEEEECTTSSCEEEEEECCT
T ss_pred eEEccCCCCccccccccccCCCCCceEccC---CCeEEEEecCCCCceEEEEEEcc
Confidence 543332110 00 0000001234567775 5545544 446777777665444
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.59 E-value=1.5e-13 Score=126.93 Aligned_cols=76 Identities=13% Similarity=0.158 Sum_probs=53.1
Q ss_pred CCeeEEEECC-CCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC
Q 014302 278 GFVTGATWDP-EGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD 356 (427)
Q Consensus 278 ~~v~~v~~sp-dg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d 356 (427)
..+..++|+| +|++++++ ++.+.+|++.+... ...+.....+.+++|+|+|++|+++ +.+
T Consensus 255 ~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~-------------~~~~~~~~~~~~~~~s~dg~~l~~~---~~~ 315 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKL-------------IKAANLDHTYYCVAFDKKGDKLYLG---GTF 315 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEE-------------EEEEECSSCCCEEEECSSSSCEEEE---SBS
T ss_pred CcceeeEecCCCCCEEEEE---cCeEEEEECccCeE-------------EEEEcCCCCccceEECCCCCEEEEe---cCC
Confidence 4567888999 99998876 44777777665311 0111123357899999999999883 334
Q ss_pred cceeEEEEEEeccCceEEE
Q 014302 357 IYKGLIAIYDARRTPLISL 375 (427)
Q Consensus 357 ~~~g~i~vwd~~~~~~~~~ 375 (427)
+.|++||+.+++.+..
T Consensus 316 ---~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 316 ---NDLAVFNPDTLEKVKN 331 (349)
T ss_dssp ---SEEEEEETTTTEEEEE
T ss_pred ---CeEEEEeccccceeee
Confidence 6699999998876543
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.59 E-value=1.9e-14 Score=143.05 Aligned_cols=214 Identities=11% Similarity=0.070 Sum_probs=141.4
Q ss_pred ceeeeEEcCCCCEEEEEeC---CCeEEEEEccC--CCCcceeeccCCcCCeeEEEEccCCCce-EEEecCCeEEEEeccC
Q 014302 101 DLQGVSWHQHKHIVAFISG---STQVIVRDYED--SGKDACILTSDSQRDVKVLEWRPNGGRS-LSVGCKGGICIWAPSY 174 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~---d~~v~vwd~~~--~~~~~~~~~~~~~~~v~~l~~sp~~~~~-la~g~~~~i~iw~~~~ 174 (427)
.|.+++|||| +++++++. +...+||.++. .+... .+... ..+...+|+|+++.+ ++++.++.+.+|+++
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~--~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~- 140 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV--KPMRILSGVDTGEAVVFTGATEDRVALYALD- 140 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS--CSBEEEEEEECSSCEEEEEECSSCEEEEEEE-
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC--CCceeeeeCCCCCeEEEEecCCCCceEEEcc-
Confidence 6889999999 77777765 56677877765 32222 22222 234567899998664 555566777799987
Q ss_pred CCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc--------------------eEEe
Q 014302 175 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT--------------------PIRR 234 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------------------~~~~ 234 (427)
++ . .......+ . ..++|+|||++++... .+..
T Consensus 141 --------~g--------------~--~~~l~~~~-~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 141 --------GG--------------G--LRELARLP-G---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp --------TT--------------E--EEEEEEES-S---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC
T ss_pred --------CC--------------c--EEEeecCC-C---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec
Confidence 22 1 11111211 1 6888999998865211 1223
Q ss_pred ccCCeEEEEEccCCCEEEEEecCC--cEEEEEcCCCCccccccCCCCeeEEE--------ECCCCCEEEEEEcCCceeee
Q 014302 235 GFGGLSILKWSPTGDYFFAAKFDG--TFYLWETNTWTSEPWSSTSGFVTGAT--------WDPEGRMILLAFAGSLTLGS 304 (427)
Q Consensus 235 ~~~~v~~~~~sp~g~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~v~~v~--------~spdg~~l~~~~~~~~~i~~ 304 (427)
+.+.+..++|||||++|+++..++ .|++||+.+++......+...+..++ |+|||..+++ ...++.+.+
T Consensus 193 ~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~-~~~~g~~~l 271 (582)
T 3o4h_A 193 GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVV-ARREGRSAV 271 (582)
T ss_dssp SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEE-EEETTEEEE
T ss_pred CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEE-EEcCCcEEE
Confidence 456688999999999999888888 89999999887763346666677777 9999955554 455557777
Q ss_pred eeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 305 IHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
|.+ .+ ... ...+.|.+++|+ +|+++++. +.+..+..|.+|+...
T Consensus 272 ~~~-g~-------~~~---------~~~~~v~~~~~s-dg~~l~~~---s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 272 FID-GE-------RVE---------APQGNHGRVVLW-RGKLVTSH---TSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EET-TE-------EEC---------CCSSEEEEEEEE-TTEEEEEE---EETTEEEEEEEETTCC
T ss_pred EEE-CC-------eec---------cCCCceEEEEec-CCEEEEEE---cCCCCCCeEEEEcCCC
Confidence 777 21 000 112367899999 99988774 3333446788887653
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.58 E-value=9e-14 Score=140.34 Aligned_cols=256 Identities=14% Similarity=0.039 Sum_probs=151.9
Q ss_pred ceeeeEEcCCCCEEEEE--eCCCeEEEEEccCCCCcceeeccCCcCCee---------EEEEc--cCCCceEEEecCCeE
Q 014302 101 DLQGVSWHQHKHIVAFI--SGSTQVIVRDYEDSGKDACILTSDSQRDVK---------VLEWR--PNGGRSLSVGCKGGI 167 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~--~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~---------~l~~s--p~~~~~la~g~~~~i 167 (427)
.|..++|++++-+++.. +.++...||.+...+ .......+...+. ...|+ |||+.+|+.+.+...
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~ 102 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG--AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQ 102 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS--CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTC
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCC--CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCC
Confidence 68899999887677766 558899999874332 2223334445555 66676 999652555544344
Q ss_pred EEEeccCC--CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEc
Q 014302 168 CIWAPSYP--GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWS 245 (427)
Q Consensus 168 ~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~s 245 (427)
.||.++.. +. + .... +... + ...+...+..++||
T Consensus 103 ~l~~~~~~~~g~------~--------------~~~~---l~~~-----------~----------~~~~~~~~~~~~~s 138 (662)
T 3azo_A 103 RLYAFEPDAPGG------A--------------VPRP---LTPV-----------S----------AVGGGLRWADPVLL 138 (662)
T ss_dssp CEEEECTTSTTC------C--------------CCEE---CSCC-----------C----------CSTTCEEEEEEEEE
T ss_pred eEEEEcCCCCCC------C--------------CCEe---ccCC-----------c----------cCCCCccccCcEEC
Confidence 55655511 00 0 0000 0000 0 00023356788999
Q ss_pred cCCCEEEEEecC----------CcEEEEEcCC------CCccccc-cCCCCeeEEEECCCCCEEEEEEcCC-------ce
Q 014302 246 PTGDYFFAAKFD----------GTFYLWETNT------WTSEPWS-STSGFVTGATWDPEGRMILLAFAGS-------LT 301 (427)
Q Consensus 246 p~g~~l~~~~~d----------g~v~iwd~~~------~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-------~~ 301 (427)
|||+.|++++.+ ..|++||+.+ ++...+. .+...+..++|||||++|++++.+. ..
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEE
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcE
Confidence 999999977766 5799999987 5555555 5567788999999999999877543 46
Q ss_pred eeeeeeCC-CCCCccccccccccccceeec-cCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeee
Q 014302 302 LGSIHFAS-KPPSLDAHLLPVDLPDIVSLT-GSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIG 379 (427)
Q Consensus 302 i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~ 379 (427)
|+++++.. ... . .. ..... +...+..++|+|||+++++ .+.++. ..|.+||+.++.+..+.+..
T Consensus 219 i~~~d~~~~g~~--~-~~-------~~l~~~~~~~~~~~~~spdg~l~~~---~~~~~~-~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 219 LKTARVTEDGRF--A-DT-------RTLLGGPEEAIAQAEWAPDGSLIVA---TDRTGW-WNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp EEEEEECTTSCE--E-EE-------EEEEEETTBCEEEEEECTTSCEEEE---ECTTSS-CEEEEECTTTCCEEESSCCS
T ss_pred EEEEEECCCCcc--c-cc-------EEeCCCCCceEcceEECCCCeEEEE---ECCCCC-eEEEEEECCCCceeeccccc
Confidence 78887763 200 0 00 01111 1347899999999996555 333321 25777777677665443211
Q ss_pred -eeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 380 -FIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 380 -~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
.+..+........++|.|+ +.++.++.. |.+.+|.+-
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~---~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLAN---GLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTT---SCEEEEEBS-SSCEEEEEE
T ss_pred ccccCccccccCceEeEeCC---CEEEEEEEc-CccEEEEEE
Confidence 0001111111235677664 677887777 888888543
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=2.6e-13 Score=126.70 Aligned_cols=209 Identities=12% Similarity=0.115 Sum_probs=128.7
Q ss_pred eeeeEEcCCCCE--EEEEe-------------CCCeEEEEEccCCCCcceeec---cCCcCCeeEEEEccCCCceEEEec
Q 014302 102 LQGVSWHQHKHI--VAFIS-------------GSTQVIVRDYEDSGKDACILT---SDSQRDVKVLEWRPNGGRSLSVGC 163 (427)
Q Consensus 102 V~~l~~sp~g~~--lat~~-------------~d~~v~vwd~~~~~~~~~~~~---~~~~~~v~~l~~sp~~~~~la~g~ 163 (427)
+..++|+|+|++ ++++. .++++.+|+++..+.....+. ..+...+.+++|+|||+.++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 556899999994 44553 689999999975322111111 134567899999999954444433
Q ss_pred -CCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEE
Q 014302 164 -KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSIL 242 (427)
Q Consensus 164 -~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~ 242 (427)
++.|.+|+++.. + ....+..+. ...+...+..+
T Consensus 165 ~~~~v~~~~~~~~--------g--------------~~~~~~~~~------------------------~~~~g~~p~~~ 198 (365)
T 1jof_A 165 TANKLWTHRKLAS--------G--------------EVELVGSVD------------------------APDPGDHPRWV 198 (365)
T ss_dssp TTTEEEEEEECTT--------S--------------CEEEEEEEE------------------------CSSTTCCEEEE
T ss_pred CCCEEEEEEECCC--------C--------------CEEEeeeEe------------------------cCCCCCCCCEe
Confidence 478999998600 0 000000000 00123457889
Q ss_pred EEccCCCEEEEEec-CCcEEEEEcC--CCCcc----cc--c-c----CCC------CeeEEE-ECCCCCEEEEEEcCCc-
Q 014302 243 KWSPTGDYFFAAKF-DGTFYLWETN--TWTSE----PW--S-S----TSG------FVTGAT-WDPEGRMILLAFAGSL- 300 (427)
Q Consensus 243 ~~sp~g~~l~~~~~-dg~v~iwd~~--~~~~~----~~--~-~----~~~------~v~~v~-~spdg~~l~~~~~~~~- 300 (427)
+|+|||++|++++. ++.|.+|++. +++.. .. . . +.. .+..++ |+|||++|+++.....
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 99999999987664 7899999875 34321 11 1 1 121 578999 9999999987665443
Q ss_pred ----eeeeeeeCCCCCCccccccccccccceee-ccCCceeEEEECC---CCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 301 ----TLGSIHFASKPPSLDAHLLPVDLPDIVSL-TGSQGIEKIAWDA---SGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 301 ----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~sp---~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
.+.+|++... ..+.. + .... .....+..++|+| ||++|+++ +..+ +.|.||++...
T Consensus 279 ~~~~~i~v~~~~~~-g~~~~----~----~~~~~~~~~~~~~~a~sp~~~dg~~l~v~--~~~~---~~v~v~~~~~~ 342 (365)
T 1jof_A 279 ELQGYIAGFKLRDC-GSIEK----Q----LFLSPTPTSGGHSNAVSPCPWSDEWMAIT--DDQE---GWLEIYRWKDE 342 (365)
T ss_dssp TSCCEEEEEEECTT-SCEEE----E----EEEEECSSCCTTCCCEEECTTCTTEEEEE--CSSS---CEEEEEEEETT
T ss_pred CCCCeEEEEEECCC-CCEEE----e----eeeeecCCCCcccceecCCCcCCCEEEEE--EcCC---CeEEEEEEchh
Confidence 7888887531 11100 0 0001 1122467889999 89999985 3223 56999999766
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.55 E-value=2.9e-12 Score=131.02 Aligned_cols=192 Identities=13% Similarity=0.148 Sum_probs=114.8
Q ss_pred eeeEEcCCCCEEEEEeCC---------CeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEecc
Q 014302 103 QGVSWHQHKHIVAFISGS---------TQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 173 (427)
Q Consensus 103 ~~l~~sp~g~~lat~~~d---------~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~ 173 (427)
..++|||||++||+++.+ +.+.+||+.++ +. .....|...+..++||||| +.||.+.++.|.+|++.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~~-~~l~~~~~~~~~~~~SPdG-~~la~~~~~~i~~~~~~ 140 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--QL-ITEERIPNNTQWVTWSPVG-HKLAYVWNNDIYVKIEP 140 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EE-CCSSCCCTTEEEEEECSST-TCEEEEETTEEEEESST
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC--cE-EEcccCCCcceeeEECCCC-CEEEEEECCeEEEEECC
Confidence 458999999999998876 55679999887 22 2334566789999999999 56676778899999986
Q ss_pred CCCCccccccCcccccccccCCCCcceeEee----hhcccCCCceeeeEeCCCCCCcccC--------------------
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVD----FLRSQNGEQITALSWGPDGRFPGLG-------------------- 229 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~spdg~~l~~~-------------------- 229 (427)
.+....+... +........ ............+.|||||+.++..
T Consensus 141 -~~~~~~lt~~-----------g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~ 208 (740)
T 4a5s_A 141 -NLPSYRITWT-----------GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL 208 (740)
T ss_dssp -TSCCEECCSC-----------CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTC
T ss_pred -CCceEEEcCC-----------CCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCC
Confidence 2221111110 000000000 0000001122346677777653311
Q ss_pred ------------------------------------ceEEe--------ccCCeEEEEEccCCCEEEEEec----CCcEE
Q 014302 230 ------------------------------------TPIRR--------GFGGLSILKWSPTGDYFFAAKF----DGTFY 261 (427)
Q Consensus 230 ------------------------------------~~~~~--------~~~~v~~~~~sp~g~~l~~~~~----dg~v~ 261 (427)
...+. +...+..++|||||+.++.... +..|+
T Consensus 209 ~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~ 288 (740)
T 4a5s_A 209 QYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMD 288 (740)
T ss_dssp SSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEE
T ss_pred CCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEE
Confidence 00010 2223677899999997774332 23699
Q ss_pred EEEcCCCC----cc---cc--ccCCCCee-----EEEECCCCCEEE-EEEcCCc--eeeeeeeCCC
Q 014302 262 LWETNTWT----SE---PW--SSTSGFVT-----GATWDPEGRMIL-LAFAGSL--TLGSIHFASK 310 (427)
Q Consensus 262 iwd~~~~~----~~---~~--~~~~~~v~-----~v~~spdg~~l~-~~~~~~~--~i~~~~~~~~ 310 (427)
+||+.+++ +. .. ..+...+. .++|+|||+.++ +.+..++ .|+.+++...
T Consensus 289 ~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 289 ICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp EEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred EEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 99999887 32 22 24555554 789999999887 6655543 5666665543
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.51 E-value=3.6e-13 Score=126.54 Aligned_cols=218 Identities=9% Similarity=0.080 Sum_probs=123.6
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEE--ccCCCceEEEe-----------------
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEW--RPNGGRSLSVG----------------- 162 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~--sp~~~~~la~g----------------- 162 (427)
+..++|+|||++|++++.++.+++||+..+ +...+...+...+....| +|++ .+++..
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDGRNLMRVDLATL--EENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp SSSCEECTTSSEEEEEETTTEEEEEETTTC--CEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHH
T ss_pred ccceEEcCCCCEEEEEeCCCeEEEEECCCC--cceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhh
Confidence 446789999999999999999999999887 333333444444544444 8998 454421
Q ss_pred ------cCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC-CCCCcccC------
Q 014302 163 ------CKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRFPGLG------ 229 (427)
Q Consensus 163 ------~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~------ 229 (427)
.+..|.+|++. ++ +... +..+ ...+..++|+| ||+.++..
T Consensus 160 ~~~~~~~~~~l~~~d~~---------~g--------------~~~~---l~~~-~~~~~~~~~sp~dg~~l~~~~~~~~~ 212 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLK---------TG--------------ESTV---ILQE-NQWLGHPIYRPYDDSTVAFCHEGPHD 212 (388)
T ss_dssp HHGGGCCCEEEEEEETT---------TC--------------CEEE---EEEE-SSCEEEEEEETTEEEEEEEEECSCTT
T ss_pred hhhccCCcceEEEEECC---------CC--------------ceEE---eecC-CccccccEECCCCCCEEEEEEecCCC
Confidence 22557778776 11 1111 1111 34567788888 77653210
Q ss_pred ----ce------------EEecc--CCeEEEEEccCCCEEEE-EecCC----cEEEEEcCCCCccccccCCC------Ce
Q 014302 230 ----TP------------IRRGF--GGLSILKWSPTGDYFFA-AKFDG----TFYLWETNTWTSEPWSSTSG------FV 280 (427)
Q Consensus 230 ----~~------------~~~~~--~~v~~~~~sp~g~~l~~-~~~dg----~v~iwd~~~~~~~~~~~~~~------~v 280 (427)
.. +..+. ..+..++|||||+.|+. +..++ .|++||+.+++...+..... ..
T Consensus 213 ~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 292 (388)
T 3pe7_A 213 LVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNY 292 (388)
T ss_dssp TSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECT
T ss_pred CCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecC
Confidence 00 11111 13667889999998874 33322 39999999887543322111 02
Q ss_pred eEEEECCCCCEEEEEE--------cCCceeeeeeeCCCCC-CccccccccccccceeeccCCceeEEEECCCCCEEEEEE
Q 014302 281 TGATWDPEGRMILLAF--------AGSLTLGSIHFASKPP-SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSY 351 (427)
Q Consensus 281 ~~v~~spdg~~l~~~~--------~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~ 351 (427)
..++|+|||+.|++.. .....|++|++..... .+..+...... ........+..++|+|||++|+.+.
T Consensus 293 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 293 DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKV---FEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp TSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCC---BTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred CCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccc---cccccccCCCCccCCCCCCEEEEEe
Confidence 2347999999988754 3344777777765411 11111000000 0000001367889999999999864
Q ss_pred e
Q 014302 352 K 352 (427)
Q Consensus 352 ~ 352 (427)
.
T Consensus 370 ~ 370 (388)
T 3pe7_A 370 D 370 (388)
T ss_dssp C
T ss_pred c
Confidence 3
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.51 E-value=3.7e-12 Score=129.63 Aligned_cols=207 Identities=10% Similarity=0.031 Sum_probs=124.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCC-----eEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCe---------
Q 014302 101 DLQGVSWHQHKHIVAFISGST-----QVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGG--------- 166 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~-----~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~--------- 166 (427)
.+..++|||||++||.+..++ +|++||+.++ +.......+ ..+.+++|+|||+.++.+..++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg--~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA--KELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT--EEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 578999999999999876543 8999999887 332222222 23678999999966666665543
Q ss_pred -------EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCe
Q 014302 167 -------ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGL 239 (427)
Q Consensus 167 -------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v 239 (427)
|.+|++. ++ .... .+.+.. ..+...+
T Consensus 203 ~~~~~~~v~~~~l~---------t~--------------~~~~-------------~~v~~~-----------~~~~~~~ 235 (710)
T 2xdw_A 203 STNLHQKLYYHVLG---------TD--------------QSED-------------ILCAEF-----------PDEPKWM 235 (710)
T ss_dssp CCCCCCEEEEEETT---------SC--------------GGGC-------------EEEECC-----------TTCTTCE
T ss_pred ccCCCCEEEEEECC---------CC--------------cccc-------------eEEecc-----------CCCCeEE
Confidence 6677765 11 0000 000000 0012346
Q ss_pred EEEEEccCCCEEEEEec-----CCcEEEEEcCC------CC--ccccccCCCCeeEEEECCCCCEEEEEEcCCc---eee
Q 014302 240 SILKWSPTGDYFFAAKF-----DGTFYLWETNT------WT--SEPWSSTSGFVTGATWDPEGRMILLAFAGSL---TLG 303 (427)
Q Consensus 240 ~~~~~sp~g~~l~~~~~-----dg~v~iwd~~~------~~--~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~---~i~ 303 (427)
..+.|||||++|+..+. +..|++||+.+ +. ...+..+...+.. .|+|+|+.|++.+..+. .|+
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~ 314 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLI 314 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEE
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEE
Confidence 67889999999986554 56899999986 42 2333344444544 58899999988776543 566
Q ss_pred eeeeCCCCCCccccccccccccceeeccC--CceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce
Q 014302 304 SIHFASKPPSLDAHLLPVDLPDIVSLTGS--QGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL 372 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~ 372 (427)
.+++...... . . .....+. ..+..++|++++.++++...++. ..|.+|++.++..
T Consensus 315 ~~d~~~~~~~---~-----~--~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~----~~l~~~~~~~g~~ 371 (710)
T 2xdw_A 315 NIDFTDPEES---K-----W--KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVK----NTLQLHDLATGAL 371 (710)
T ss_dssp EEETTSCCGG---G-----C--EEEECCCSSCEEEEEEEETTTEEEEEEEETTE----EEEEEEETTTCCE
T ss_pred EEeCCCCCcc---c-----c--eeccCCCCCCeEEEEEEEcCCEEEEEEEECCE----EEEEEEECCCCCE
Confidence 6666543100 0 0 0111111 25788999976666655322221 4578888866654
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.49 E-value=3e-11 Score=108.39 Aligned_cols=238 Identities=10% Similarity=0.065 Sum_probs=148.8
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeec-----cCCcCCeeEEEEc-cCCCceEEEec--CCeEEEEec
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILT-----SDSQRDVKVLEWR-PNGGRSLSVGC--KGGICIWAP 172 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~v~~l~~s-p~~~~~la~g~--~~~i~iw~~ 172 (427)
.+.+++++++|+++++...++.|++||.+.. ...... ..+...+.++++. +++ .++++.. ++.|.+|+.
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~--~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~ 107 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQ 107 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSC--EEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEECT
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCCCc--EEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEECC
Confidence 5789999999998888888999999987633 121111 1244578899994 666 6666653 688999985
Q ss_pred cCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE
Q 014302 173 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF 252 (427)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~ 252 (427)
+ + .....+.. .+...+..++++|+|+.++
T Consensus 108 ~----------g----------------~~~~~~~~-------------------------~~~~~~~~i~~~~~g~l~v 136 (286)
T 1q7f_A 108 Y----------G----------------QFVRKFGA-------------------------TILQHPRGVTVDNKGRIIV 136 (286)
T ss_dssp T----------S----------------CEEEEECT-------------------------TTCSCEEEEEECTTSCEEE
T ss_pred C----------C----------------cEEEEecC-------------------------ccCCCceEEEEeCCCCEEE
Confidence 4 0 00110100 0123567899999998777
Q ss_pred EEecCCcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeec
Q 014302 253 AAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT 330 (427)
Q Consensus 253 ~~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (427)
+...++.|++||........+. .+...+..++++++|+.++ +...++.+..++...... .... . ..
T Consensus 137 ~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v-~~~~~~~i~~~~~~g~~~---~~~~-~-------~g 204 (286)
T 1q7f_A 137 VECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFI-SDNRAHCVKVFNYEGQYL---RQIG-G-------EG 204 (286)
T ss_dssp EETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEE-EEGGGTEEEEEETTCCEE---EEES-C-------TT
T ss_pred EECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEE-EECCCCEEEEEcCCCCEE---EEEc-c-------CC
Confidence 7777889999996533222222 3445689999999998555 445455777776533200 0000 0 00
Q ss_pred cCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEee
Q 014302 331 GSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWS 410 (427)
Q Consensus 331 ~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~ 410 (427)
....+..++++++|+++++ +..+. +.|.+|+.. +..+... ........+..+++.|+ |.++... .
T Consensus 205 ~~~~p~~i~~d~~G~l~v~---~~~~~--~~i~~~~~~-g~~~~~~-----~~~~~~~~~~~i~~~~~---g~l~vs~-~ 269 (286)
T 1q7f_A 205 ITNYPIGVGINSNGEILIA---DNHNN--FNLTIFTQD-GQLISAL-----ESKVKHAQCFDVALMDD---GSVVLAS-K 269 (286)
T ss_dssp TSCSEEEEEECTTCCEEEE---ECSSS--CEEEEECTT-SCEEEEE-----EESSCCSCEEEEEEETT---TEEEEEE-T
T ss_pred ccCCCcEEEECCCCCEEEE---eCCCC--EEEEEECCC-CCEEEEE-----cccCCCCcceeEEECCC---CcEEEEC-C
Confidence 0136789999999988777 33321 269999964 3333221 11112223668889885 6666664 6
Q ss_pred CceEEEEec
Q 014302 411 SGFCCTYPL 419 (427)
Q Consensus 411 ~g~i~~~~~ 419 (427)
+++|.+|.+
T Consensus 270 ~~~v~v~~~ 278 (286)
T 1q7f_A 270 DYRLYIYRY 278 (286)
T ss_dssp TTEEEEEEC
T ss_pred CCeEEEEEc
Confidence 899999985
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.46 E-value=7.4e-11 Score=108.30 Aligned_cols=241 Identities=13% Similarity=0.182 Sum_probs=144.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-----CeEEEEeccCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-----GGICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-----~~i~iw~~~~~ 175 (427)
.+.+++|+|+|++++++..++.|.+||...+ ........+...+.+++|+|+| .++++... +.|.+|+.+
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~-- 120 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETK--EIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATEN-- 120 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTC--CEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTT--
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCC--cEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCC--
Confidence 4678999999998888888999999988765 3333333456679999999999 56555543 478888876
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEe
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAK 255 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~ 255 (427)
++ ..... +... .....+..++++|+|+.+++..
T Consensus 121 -------~~--------------~~~~~--~~~~------------------------~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 121 -------GD--------------NLQDI--IEDL------------------------STAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp -------SC--------------SCEEE--ECSS------------------------SSCCCEEEEEECTTSCEEEEEC
T ss_pred -------CC--------------EEEEE--EccC------------------------ccCCcccceEECCCCCEEEEec
Confidence 11 10000 0000 0123577888999998776554
Q ss_pred c------CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceee
Q 014302 256 F------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSL 329 (427)
Q Consensus 256 ~------dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (427)
. .+.|..||..+.+...+......+..++|+|+|+.|+++....+.++.+++......+.. ... ......
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~-~~~---~~~~~~ 229 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP-FGA---TIPYYF 229 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEE-EEE---EEEEEC
T ss_pred cccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccc-ccc---eEEEec
Confidence 3 245666665544443333333457899999999988777666668888887532111100 000 000001
Q ss_pred ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCC----CCCceeEEeccCCCCCcee
Q 014302 330 TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGD----NPKPVAFSFHDKFKQGPLL 405 (427)
Q Consensus 330 ~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~~~g~~l 405 (427)
.....+..++++++|+++++.. .+ +.|.+||.. +..+.. +..+.. ...+.+++|.|+ +..|
T Consensus 230 ~~~~~~~~i~~d~~G~l~v~~~---~~---~~v~~~d~~-g~~~~~-----~~~~~~~~g~~~~~~~~~~~~d---g~~L 294 (333)
T 2dg1_A 230 TGHEGPDSCCIDSDDNLYVAMY---GQ---GRVLVFNKR-GYPIGQ-----ILIPGRDEGHMLRSTHPQFIPG---TNQL 294 (333)
T ss_dssp CSSSEEEEEEEBTTCCEEEEEE---TT---TEEEEECTT-SCEEEE-----EECTTGGGTCSCBCCEEEECTT---SCEE
T ss_pred CCCCCCCceEECCCCCEEEEEc---CC---CEEEEECCC-CCEEEE-----EEcCCCccccccCcceEEECCC---CCEE
Confidence 1123678899999999777632 22 459999984 443322 111111 113567888764 5556
Q ss_pred EEEeeCc
Q 014302 406 SVCWSSG 412 (427)
Q Consensus 406 ~v~~~~g 412 (427)
.++..+|
T Consensus 295 ~v~~~~g 301 (333)
T 2dg1_A 295 IICSNDI 301 (333)
T ss_dssp EEEEECG
T ss_pred EEEeCcc
Confidence 6666664
No 172
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.46 E-value=6.2e-11 Score=105.23 Aligned_cols=244 Identities=13% Similarity=0.059 Sum_probs=154.1
Q ss_pred ceeeeEEcCCCCEEE-EEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVA-FISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~la-t~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
...+++++++|++++ +.+.++.|.+|+.... ........+...+.++++.+++ .++++..++.|.+|+.+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~i~~~d~~------ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGST--GTTVLPFNGLYQPQGLAVDGAG-TVYVTDFNNRVVTLAAG------ 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------EECCCCSCCSCCCEEECTTC-CEEEEETTTEEEEECTT------
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCc--ccceEeeCCcCCcceeEECCCC-CEEEEcCCCEEEEEeCC------
Confidence 568899999999766 4467889999876544 2222222333568899999998 46555557788889875
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCc
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGT 259 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~ 259 (427)
.. .... +.. ........++++++|+.+++...++.
T Consensus 96 ---~~--------------~~~~---~~~-------------------------~~~~~p~~i~~~~~g~l~v~~~~~~~ 130 (270)
T 1rwi_B 96 ---SN--------------NQTV---LPF-------------------------DGLNYPEGLAVDTQGAVYVADRGNNR 130 (270)
T ss_dssp ---CS--------------CCEE---CCC-------------------------CSCSSEEEEEECTTCCEEEEEGGGTE
T ss_pred ---Cc--------------eEee---eec-------------------------CCcCCCcceEECCCCCEEEEECCCCE
Confidence 00 0000 000 01235678999999987667777889
Q ss_pred EEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEE
Q 014302 260 FYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKI 338 (427)
Q Consensus 260 v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 338 (427)
|.+|+..+....... .....+..++++++|+.++ +....+.+..++........ . .......+..+
T Consensus 131 i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v-~~~~~~~i~~~~~~~~~~~~----~--------~~~~~~~p~~i 197 (270)
T 1rwi_B 131 VVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYV-TDTDNNRVVKLEAESNNQVV----L--------PFTDITAPWGI 197 (270)
T ss_dssp EEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEE-EEGGGTEEEEECTTTCCEEE----C--------CCSSCCSEEEE
T ss_pred EEEEECCCceeEeeccccCCCceeEEEeCCCCEEE-EECCCCEEEEEecCCCceEe----e--------cccCCCCceEE
Confidence 999976554432222 3334678999999998554 44444567766654431100 0 00111367899
Q ss_pred EECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 339 AWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 339 ~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
+++++|..+++ ...+ +.|.+|+.......... ......+..+++.++ |.++...+.+++|.+|.
T Consensus 198 ~~d~~g~l~v~---~~~~---~~v~~~~~~~~~~~~~~-------~~~~~~p~~i~~~~~---g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 198 AVDEAGTVYVT---EHNT---NQVVKLLAGSTTSTVLP-------FTGLNTPLAVAVDSD---RTVYVADRGNDRVVKLT 261 (270)
T ss_dssp EECTTCCEEEE---ETTT---SCEEEECTTCSCCEECC-------CCSCSCEEEEEECTT---CCEEEEEGGGTEEEEEC
T ss_pred EECCCCCEEEE---ECCC---CcEEEEcCCCCcceeec-------cCCCCCceeEEECCC---CCEEEEECCCCEEEEEc
Confidence 99999976665 3333 45999998765443211 111134778888875 67888888999999999
Q ss_pred ccccCCCCC
Q 014302 419 LIFRSHLLP 427 (427)
Q Consensus 419 ~~~~~~~~~ 427 (427)
+-.+.++.+
T Consensus 262 ~~~~~~~~~ 270 (270)
T 1rwi_B 262 SLEHHHHHH 270 (270)
T ss_dssp CCGGGSCCC
T ss_pred CCCccccCC
Confidence 988887753
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.45 E-value=3.2e-11 Score=110.77 Aligned_cols=253 Identities=12% Similarity=0.097 Sum_probs=155.2
Q ss_pred ceeeeEEcCCCCEEEEEeCC------------------------CeEEEEEccCCCCcceee-ccCCcCCeeEEEEccCC
Q 014302 101 DLQGVSWHQHKHIVAFISGS------------------------TQVIVRDYEDSGKDACIL-TSDSQRDVKVLEWRPNG 155 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d------------------------~~v~vwd~~~~~~~~~~~-~~~~~~~v~~l~~sp~~ 155 (427)
.+.+++++|+|+++++...+ ++|.+||..++ ..... ...+-.....++++|+|
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA--EILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC--CEEEEECTTTCSSEEEEEECTTS
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC--eEEeccCCCccCCceEEEECCCC
Confidence 68999999999999888777 47899987765 22222 22344578899999999
Q ss_pred CceEEEec-CCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEe
Q 014302 156 GRSLSVGC-KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRR 234 (427)
Q Consensus 156 ~~~la~g~-~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~ 234 (427)
.++++.. ++.|.+|+.+ +.. ..+..+... ...|. -..
T Consensus 103 -~l~v~d~~~~~v~~~~~~--g~~----------------------~~~~~~~~~----------~~~g~-------~~~ 140 (329)
T 3fvz_A 103 -NYWVTDVALHQVFKLDPH--SKE----------------------GPLLILGRS----------MQPGS-------DQN 140 (329)
T ss_dssp -CEEEEETTTTEEEEECTT--CSS----------------------CCSEEESBT----------TBCCC-------STT
T ss_pred -CEEEEECCCCEEEEEeCC--CCe----------------------EEEEEeccc----------CCCCC-------Ccc
Confidence 4666654 4889999875 000 000000000 00000 001
Q ss_pred ccCCeEEEEEcc-CCCEEEEEe-cCCcEEEEEcCCCCccc-ccc----------CCCCeeEEEECCCCCEEEEEEcCCce
Q 014302 235 GFGGLSILKWSP-TGDYFFAAK-FDGTFYLWETNTWTSEP-WSS----------TSGFVTGATWDPEGRMILLAFAGSLT 301 (427)
Q Consensus 235 ~~~~v~~~~~sp-~g~~l~~~~-~dg~v~iwd~~~~~~~~-~~~----------~~~~v~~v~~spdg~~l~~~~~~~~~ 301 (427)
+......++++| +|..+++.+ .++.|++||. .++... +.. +-.....++++|++..|+++......
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~ 219 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR 219 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE
Confidence 233577899999 777777776 6899999994 343322 211 12347899999995566666666668
Q ss_pred eeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCC----CcceeEEEEEEeccCceEEEee
Q 014302 302 LGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGD----DIYKGLIAIYDARRTPLISLSL 377 (427)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~----d~~~g~i~vwd~~~~~~~~~~~ 377 (427)
|.+|+..+.. +.... ........+.+++|+| +..+++ .+. +....+|++|++.++.++....
T Consensus 220 I~~~~~~~G~--~~~~~--------~~~~~~~~~~~~~~~p-g~~~~~---~g~~~v~~~~~~~v~~~~~~~g~~~~~~~ 285 (329)
T 3fvz_A 220 IQCFKTDTKE--FVREI--------KHASFGRNVFAISYIP-GFLFAV---NGKPYFGDQEPVQGFVMNFSSGEIIDVFK 285 (329)
T ss_dssp EEEEETTTCC--EEEEE--------CCTTTTTCEEEEEEET-TEEEEE---ECCCCTTCSCCCCEEEEETTTCCEEEEEC
T ss_pred EEEEECCCCc--EEEEE--------eccccCCCcceeeecC-CEEEEe---CCCEEeccCCCcEEEEEEcCCCeEEEEEc
Confidence 8888776321 10000 0011233678899999 433333 211 1111469999999888764321
Q ss_pred eeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 378 IGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 378 ~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
. .......|..+++.|+ |.++...+.+++|..|++
T Consensus 286 ~----~~~~~~~p~~ia~~~d---G~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 286 P----VRKHFDMPHDIVASED---GTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp C----SSSCCSSEEEEEECTT---SEEEEEESSSCCEEEEEE
T ss_pred C----CCCccCCeeEEEECCC---CCEEEEECCCCEEEEEeC
Confidence 0 1222334778999885 788999999999999985
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.43 E-value=3.4e-12 Score=120.00 Aligned_cols=231 Identities=10% Similarity=0.083 Sum_probs=125.9
Q ss_pred eeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeE-------------------EEEccCCCceEEE---
Q 014302 104 GVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKV-------------------LEWRPNGGRSLSV--- 161 (427)
Q Consensus 104 ~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~-------------------l~~sp~~~~~la~--- 161 (427)
.+.|+|||++|++++.++.+++|++..+ ....+...+...... ++|+|+++.++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETL--EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTC--CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCC--CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 4789999999999999999999998876 333333323322222 3567777433332
Q ss_pred --ecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC-CCCCccc----------
Q 014302 162 --GCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRFPGL---------- 228 (427)
Q Consensus 162 --g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~---------- 228 (427)
..+..|.+|++. .+. ...+. . ....+..+.|+| +|+.++.
T Consensus 163 ~~~~~~~l~~~d~~-~g~----------------------~~~~~---~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~ 215 (396)
T 3c5m_A 163 HTNPTCRLIKVDIE-TGE----------------------LEVIH---Q-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVD 215 (396)
T ss_dssp HTCCCEEEEEEETT-TCC----------------------EEEEE---E-ESSCEEEEEEETTEEEEEEEEECSCSSSCS
T ss_pred cCCCcceEEEEECC-CCc----------------------EEeec---c-CCcccccceECCCCCCEEEEEecCCCCCCC
Confidence 233567778876 111 11111 1 133455566666 4442110
Q ss_pred ----------CceEE--ec--cCCeEEEEEccCCCEEEEEecC-----CcEEEEEcCCCCccccccCCCCeeEEEECC-C
Q 014302 229 ----------GTPIR--RG--FGGLSILKWSPTGDYFFAAKFD-----GTFYLWETNTWTSEPWSSTSGFVTGATWDP-E 288 (427)
Q Consensus 229 ----------~~~~~--~~--~~~v~~~~~sp~g~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~v~~v~~sp-d 288 (427)
+.... .+ ...+..++|+|||++|+..+.+ +.|++||+.+++......... .. +.|+| |
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~d 293 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFD 293 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSS
T ss_pred ceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCC
Confidence 00001 11 1136678999999988855443 449999998876544332222 33 89999 9
Q ss_pred CCEEEEEEc---------------CCceeeeeeeCCCCC-CccccccccccccceeeccCCceeEEEECCCCCEEEEEEe
Q 014302 289 GRMILLAFA---------------GSLTLGSIHFASKPP-SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYK 352 (427)
Q Consensus 289 g~~l~~~~~---------------~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~ 352 (427)
|+.++++.. .+..++.|++..... .+..+...+.. ........+..++|+|||++|+++..
T Consensus 294 g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 294 GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDV---LDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp SSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCC---BTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred CceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcccc---ccccccCCCCCceEccCCCeEEEEec
Confidence 998887542 234677777655421 11111000000 00000002566899999999988643
Q ss_pred cCCCcceeEEEEEEeccCc
Q 014302 353 GGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 353 ~~~d~~~g~i~vwd~~~~~ 371 (427)
.... ..|+++++..+.
T Consensus 371 ~~~~---~~l~~~~~~~~~ 386 (396)
T 3c5m_A 371 FEGV---PAIYIADVPESY 386 (396)
T ss_dssp TTSS---CEEEEEECCTTC
T ss_pred CCCC---ceEEEEEEcccc
Confidence 3222 235555555544
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.41 E-value=8.6e-11 Score=106.04 Aligned_cols=229 Identities=10% Similarity=0.101 Sum_probs=142.2
Q ss_pred ceeeeEEcCCCC-EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKH-IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~-~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
...+++|+|+|+ +++++..++.|.+|+.... . .....+...+.+++|+|+| .++++.. ++.|.+|+..
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~---~-~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~----- 98 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ---L-SPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREP----- 98 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC---E-EEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECST-----
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC---e-EEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCC-----
Confidence 467899999998 7778888999999998764 2 2223455678999999999 5666654 4889999885
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEE----
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAA---- 254 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~---- 254 (427)
++ ...... ... . + .....+..++++|+|+++++.
T Consensus 99 ----~g--------------~~~~~~--~~~------------~------~----~~~~~~~~i~~d~~G~l~vtd~~~g 136 (296)
T 3e5z_A 99 ----GG--------------EWESIA--DSF------------E------G----KKLNSPNDVCLAPDGSLWFSDPTYG 136 (296)
T ss_dssp ----TC--------------CEEEEE--CEE------------T------T----EECCCCCCEEECTTSCEEEEECSHH
T ss_pred ----CC--------------cEEEEe--ecc------------C------C----CCCCCCCCEEECCCCCEEEECCccc
Confidence 11 111000 000 0 0 012245678889999877763
Q ss_pred ec-------------CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCc-cccccc
Q 014302 255 KF-------------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSL-DAHLLP 320 (427)
Q Consensus 255 ~~-------------dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~-~~~~~~ 320 (427)
+. .+.|..++.. ++......+......++|+|+|+.+ ++....+.++.+++... ..+ .....
T Consensus 137 ~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~-g~~~~~~~~- 212 (296)
T 3e5z_A 137 IDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNAR-GETEYQGVH- 212 (296)
T ss_dssp HHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSS-SCEEEEEEE-
T ss_pred cccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCC-CcCcCCCeE-
Confidence 21 2355555544 3333334556677899999999999 56666668888887621 111 00000
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEec-cCC
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFH-DKF 399 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~~ 399 (427)
. ....+.+..++++++|+++++. + +.|.+|+.. +..+. .+..+.. +.+++|. |
T Consensus 213 ------~-~~~~~~p~~i~~d~~G~l~v~~--~------~~v~~~~~~-g~~~~-----~~~~~~~---~~~~~f~~~-- 266 (296)
T 3e5z_A 213 ------F-TVEPGKTDGLRVDAGGLIWASA--G------DGVHVLTPD-GDELG-----RVLTPQT---TSNLCFGGP-- 266 (296)
T ss_dssp ------E-CCSSSCCCSEEEBTTSCEEEEE--T------TEEEEECTT-SCEEE-----EEECSSC---CCEEEEEST--
T ss_pred ------e-eCCCCCCCeEEECCCCCEEEEc--C------CeEEEECCC-CCEEE-----EEECCCC---ceeEEEECC--
Confidence 0 0123356789999999977663 2 459999986 44432 2222222 5578884 4
Q ss_pred CCCceeEEEeeCc
Q 014302 400 KQGPLLSVCWSSG 412 (427)
Q Consensus 400 ~~g~~l~v~~~~g 412 (427)
++..|.++..+|
T Consensus 267 -d~~~L~v~t~~~ 278 (296)
T 3e5z_A 267 -EGRTLYMTVSTE 278 (296)
T ss_dssp -TSCEEEEEETTE
T ss_pred -CCCEEEEEcCCe
Confidence 366788886654
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.40 E-value=3e-11 Score=111.50 Aligned_cols=221 Identities=14% Similarity=0.146 Sum_probs=121.8
Q ss_pred ceeeeEEcCCCCEEEEEeCC---Ce--EEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-----------
Q 014302 101 DLQGVSWHQHKHIVAFISGS---TQ--VIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK----------- 164 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d---~~--v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~----------- 164 (427)
.+..++|||||++||+.+.+ +. |.+|++..+ +...+...+ . +.+++|+|||+.++.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g--~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL--SSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT--EEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC--ceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 57889999999999987654 34 555566554 333333333 3 9999999999555555432
Q ss_pred ----------------CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCccc
Q 014302 165 ----------------GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGL 228 (427)
Q Consensus 165 ----------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~ 228 (427)
..|.+|++. + |+.+
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~---------~---------------------------------------~~~~-- 165 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTE---------S---------------------------------------EEVI-- 165 (347)
T ss_dssp -CCCC---------CEEEEEEEETT---------T---------------------------------------TEEE--
T ss_pred ccceeecCcccccCccceEEEEECC---------C---------------------------------------CeEE--
Confidence 123333332 0 0000
Q ss_pred CceEEeccCCeEEEEEccCCCEEEEEecCC-------cEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCC--
Q 014302 229 GTPIRRGFGGLSILKWSPTGDYFFAAKFDG-------TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGS-- 299 (427)
Q Consensus 229 ~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg-------~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~-- 299 (427)
..+.. . .+..++|+||| .++++..+. ...||.+.+++...+..+ ..+..+ +|||++|++++...
T Consensus 166 -~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 166 -EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp -EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCSSS
T ss_pred -eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccccC
Confidence 01222 2 56788999999 666665542 445555444443333334 444444 99999998876543
Q ss_pred -----ceeeeeeeCCCCCCccccccccccccceeeccCCceeE-EEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 300 -----LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEK-IAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 300 -----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
..++.++ ... . ..+ ...+...+.. +.|+ || +++++ +.+ +.++|| +.++...
T Consensus 239 ~~~~~~~l~~~d--~~~--~----~~l------~~~~~~~~~~~~~~s-dg-~~~~~---~~~---~~~~l~-~~~g~~~ 295 (347)
T 2gop_A 239 YMSEHNKLYIYD--GKE--V----MGI------LDEVDRGVGQAKIKD-GK-VYFTL---FEE---GSVNLY-IWDGEIK 295 (347)
T ss_dssp CCCSSCEEEEEC--SSC--E----EES------STTCCSEEEEEEEET-TE-EEEEE---EET---TEEEEE-EESSSEE
T ss_pred CccccceEEEEC--CCc--e----Eec------cccCCcccCCccEEc-Cc-EEEEE---ecC---CcEEEE-EcCCceE
Confidence 2455555 211 0 000 0011235675 8999 88 66663 333 458899 8755543
Q ss_pred EEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceE-EEEe
Q 014302 374 SLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFC-CTYP 418 (427)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i-~~~~ 418 (427)
.+. .+ .....+++|.| .++.++.++++. .+|.
T Consensus 296 ~~~-----~~---~~~v~~~~~s~-----~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 296 PIA-----KG---RHWIMGFDVDE-----IVVYLKETATRLRELFT 328 (347)
T ss_dssp EEE-----CS---SSEEEEEEESS-----SEEEEEECSSSCCEEEE
T ss_pred EEe-----cC---CCeEEeeeeeC-----cEEEEEcCCCChHHheE
Confidence 222 11 11234667766 355566566654 4543
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=4.5e-11 Score=109.73 Aligned_cols=240 Identities=13% Similarity=0.102 Sum_probs=147.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~ 179 (427)
.|.+++|++++..++..+.++.+++|. . ........+...+.+++|+|++ .+++++. ++.|.+|+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~------ 74 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTIT---A--EPWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPE------ 74 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEE---C--EEEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTT------
T ss_pred ccceeeecCCccceeEEeecccCcccc---c--ceeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCC------
Confidence 477889999998877777888888882 2 1223333455678999999999 5766654 4889999876
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC--
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD-- 257 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d-- 257 (427)
++ ..... ...+...+.+++|+|+|+++++...+
T Consensus 75 ---~~--------------~~~~~----------------------------~~~~~~~~~~i~~~~dg~l~v~~~~~~~ 109 (333)
T 2dg1_A 75 ---TK--------------EIKRP----------------------------FVSHKANPAAIKIHKDGRLFVCYLGDFK 109 (333)
T ss_dssp ---TC--------------CEEEE----------------------------EECSSSSEEEEEECTTSCEEEEECTTSS
T ss_pred ---CC--------------cEEEE----------------------------eeCCCCCcceEEECCCCcEEEEeCCCCC
Confidence 11 10000 00123467889999999877776655
Q ss_pred --CcEEEEEcCCCCccccc---cCCCCeeEEEECCCCCEEEEEEcC-----CceeeeeeeCCCCCCccccccccccccce
Q 014302 258 --GTFYLWETNTWTSEPWS---STSGFVTGATWDPEGRMILLAFAG-----SLTLGSIHFASKPPSLDAHLLPVDLPDIV 327 (427)
Q Consensus 258 --g~v~iwd~~~~~~~~~~---~~~~~v~~v~~spdg~~l~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
+.|.+||..+.....+. .....+..++++|+|+.+++.... .+.++.++..... +. .
T Consensus 110 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~--~~-----------~ 176 (333)
T 2dg1_A 110 STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT--VT-----------P 176 (333)
T ss_dssp SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC--EE-----------E
T ss_pred CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE--EE-----------E
Confidence 68999998877654222 244578999999999877754321 2344444332211 10 0
Q ss_pred eeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc-CceEE-EeeeeeeeCCCCCCCceeEEeccCCCCCcee
Q 014302 328 SLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR-TPLIS-LSLIGFIRGPGDNPKPVAFSFHDKFKQGPLL 405 (427)
Q Consensus 328 ~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l 405 (427)
.......+..++|+|+|++|.++ ...+ +.|.+|++.. +..+. +.......... ...+..+++.++ |.++
T Consensus 177 ~~~~~~~~~~i~~~~dg~~l~v~--~~~~---~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~---G~l~ 247 (333)
T 2dg1_A 177 IIQNISVANGIALSTDEKVLWVT--ETTA---NRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSD---DNLY 247 (333)
T ss_dssp EEEEESSEEEEEECTTSSEEEEE--EGGG---TEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTT---CCEE
T ss_pred eecCCCcccceEECCCCCEEEEE--eCCC---CeEEEEEecCCCcCcccccceEEEecCC-CCCCCceEECCC---CCEE
Confidence 00111257889999999987764 2222 4599999964 33221 11111111111 123556778764 6676
Q ss_pred EEEeeCceEEEEec
Q 014302 406 SVCWSSGFCCTYPL 419 (427)
Q Consensus 406 ~v~~~~g~i~~~~~ 419 (427)
...+.++.|.+|+.
T Consensus 248 v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 248 VAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEETTTEEEEECT
T ss_pred EEEcCCCEEEEECC
Confidence 66667788888864
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.38 E-value=4.2e-11 Score=121.48 Aligned_cols=231 Identities=11% Similarity=0.012 Sum_probs=135.8
Q ss_pred ceeeeEEcCCCCEEEEE-----eCCCeEEEEEccCCCCcceeeccCCcCCe--eEEEEccCCCceEEEecCCe-------
Q 014302 101 DLQGVSWHQHKHIVAFI-----SGSTQVIVRDYEDSGKDACILTSDSQRDV--KVLEWRPNGGRSLSVGCKGG------- 166 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-----~~d~~v~vwd~~~~~~~~~~~~~~~~~~v--~~l~~sp~~~~~la~g~~~~------- 166 (427)
.+.+++|||||++||.+ +.+.+|++||+.++. ... ..+...+ ..++|+|||+.++.+..+..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~--~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE--WSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC--BCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC--CcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 58899999999999854 345789999998872 220 1122222 68999999966666665544
Q ss_pred ------EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCc----------
Q 014302 167 ------ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGT---------- 230 (427)
Q Consensus 167 ------i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~---------- 230 (427)
|.+|++. ++ ..+-.++.....+ ...+..+.|+|||+++....
T Consensus 198 ~~~~~~v~~~~l~---------t~------------~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 198 RPGYTTIRYHTLG---------TE------------PSKDTVVHERTGD-PTTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp GGGGCEEEEEETT---------SC------------GGGCEEEECCCCC-TTCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred CCCCCEEEEEECC---------CC------------chhceEEEecCCC-CEEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 8889886 11 0000111111111 34677889999998754211
Q ss_pred ----------eEEeccCCeEEEEEccCCCEEE-EEe---cCCcEEEEEcCCCCc---cccccC--CCCeeEEEECCCCCE
Q 014302 231 ----------PIRRGFGGLSILKWSPTGDYFF-AAK---FDGTFYLWETNTWTS---EPWSST--SGFVTGATWDPEGRM 291 (427)
Q Consensus 231 ----------~~~~~~~~v~~~~~sp~g~~l~-~~~---~dg~v~iwd~~~~~~---~~~~~~--~~~v~~v~~spdg~~ 291 (427)
.+..+...+....| ++|+ |+ .+. .++.|.+||+.+++. ..+..+ ...+..++|+ ++..
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~l 332 (695)
T 2bkl_A 256 WKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHL 332 (695)
T ss_dssp EECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEE
T ss_pred EEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEE
Confidence 11223334455555 6777 55 443 257899999987654 223333 4567888888 5555
Q ss_pred EEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 292 ILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 292 l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
+++ ...++...++.+.-. .. ....+. +...+.+..++++|+++.|+..+.+. ..+++|++||+.+++
T Consensus 333 v~~-~~~dg~~~l~~~~~~-g~---~~~~l~------~~~~~~v~~~~~s~d~~~l~~~~ss~--~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 333 SLE-YLKDATSEVRVATLK-GK---PVRTVQ------LPGVGAASNLMGLEDLDDAYYVFTSF--TTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEE-EEETTEEEEEEEETT-CC---EEEECC------CSSSSEECCCBSCTTCSEEEEEEEET--TEEEEEEEEETTTCC
T ss_pred EEE-EEECCEEEEEEEeCC-CC---eeEEec------CCCCeEEEEeecCCCCCEEEEEEcCC--CCCCEEEEEECCCCc
Confidence 544 444444444433311 00 000010 11233677888999999888764332 235889999998876
Q ss_pred eE
Q 014302 372 LI 373 (427)
Q Consensus 372 ~~ 373 (427)
..
T Consensus 400 ~~ 401 (695)
T 2bkl_A 400 SE 401 (695)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.37 E-value=5.1e-11 Score=109.97 Aligned_cols=223 Identities=11% Similarity=0.177 Sum_probs=124.4
Q ss_pred CceeeeEEcCCCCEEEEEe---------CCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC---Ce-
Q 014302 100 VDLQGVSWHQHKHIVAFIS---------GSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK---GG- 166 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~---------~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~---~~- 166 (427)
..+..+++ ||++||... .++.|.+|++..+ ....+ ..+..++|||||+.++.+..+ +.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~--~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN--ARRFI-----ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC--CEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC--ceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 35778888 999887752 2567888888766 33333 468899999999555444432 33
Q ss_pred -EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEc
Q 014302 167 -ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWS 245 (427)
Q Consensus 167 -i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~s 245 (427)
|.+|++. ++ + ...... +.. +..++|+
T Consensus 86 ~l~~~~~~---------~g--------------~--~~~l~~---------------------------~~~-~~~~~ws 112 (347)
T 2gop_A 86 EIWVADLE---------TL--------------S--SKKILE---------------------------AKN-IRSLEWN 112 (347)
T ss_dssp EEEEEETT---------TT--------------E--EEEEEE---------------------------ESE-EEEEEEC
T ss_pred eEEEEECC---------CC--------------c--eEEEEc---------------------------CCC-ccceeEC
Confidence 4455554 11 1 111011 111 4555666
Q ss_pred cCCCEEEEEec---------------------------CCcEEEEEcCCCCc-cccccCCCCeeEEEECCCCCEEEEEEc
Q 014302 246 PTGDYFFAAKF---------------------------DGTFYLWETNTWTS-EPWSSTSGFVTGATWDPEGRMILLAFA 297 (427)
Q Consensus 246 p~g~~l~~~~~---------------------------dg~v~iwd~~~~~~-~~~~~~~~~v~~v~~spdg~~l~~~~~ 297 (427)
|||+.|+.++. ...|++||+.+++. ..+.. . .+..++|+||| .++++..
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEEC
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEec
Confidence 66665554432 25689999988776 44434 3 78899999999 5555433
Q ss_pred CC--------ceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCc--ceeEEEEEEe
Q 014302 298 GS--------LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDI--YKGLIAIYDA 367 (427)
Q Consensus 298 ~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~--~~g~i~vwd~ 367 (427)
+. ..++.++ .. ....+ ..+ ..+..+ +|||++|+.......+. ....|.+||
T Consensus 190 ~~~~~~~~~~~~l~~~d--~~------~~~~l-------~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d- 250 (347)
T 2gop_A 190 REIIPQYFKFWDIYIWE--DG------KEEKM-------FEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD- 250 (347)
T ss_dssp CCSSCCSSCCEEEEEEE--TT------EEEEE-------EEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-
T ss_pred ccccccccccccEEEeC--CC------ceEEe-------ccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC-
Confidence 21 1344443 21 00000 011 234443 99999998854322100 014588888
Q ss_pred ccCceEEEeeeeeeeCCCCCCCcee-EEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 368 RRTPLISLSLIGFIRGPGDNPKPVA-FSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
++....+.. ........ +.|. ++ ++.++..+|.+.+| +-
T Consensus 251 -~~~~~~l~~-------~~~~~~~~~~~~s----dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 251 -GKEVMGILD-------EVDRGVGQAKIKD----GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp -SSCEEESST-------TCCSEEEEEEEET----TE-EEEEEEETTEEEEE-EE
T ss_pred -CCceEeccc-------cCCcccCCccEEc----Cc-EEEEEecCCcEEEE-Ec
Confidence 544432221 11111222 4554 36 88888899999998 64
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.37 E-value=2.2e-11 Score=122.84 Aligned_cols=212 Identities=10% Similarity=0.023 Sum_probs=122.7
Q ss_pred ceeeeEEcCCCCEEEEEeCC----------CeEEEEEccCCC----CcceeeccCCcCCeeEEEEccCCCceEEEecC--
Q 014302 101 DLQGVSWHQHKHIVAFISGS----------TQVIVRDYEDSG----KDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-- 164 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d----------~~v~vwd~~~~~----~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-- 164 (427)
.+.+++|||||++|++++.+ ..|++|++.... .....+...+...+..++|||||+.++.++.+
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~ 210 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHP 210 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTT
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCC
Confidence 67899999999999988876 588899987720 13333331445678899999999555445433
Q ss_pred ------CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCC
Q 014302 165 ------GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGG 238 (427)
Q Consensus 165 ------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~ 238 (427)
..|.+|+++..+ ...... . ....+...
T Consensus 211 ~~~~~~~~i~~~d~~~~g----------------------~~~~~~-----------~--------------l~~~~~~~ 243 (662)
T 3azo_A 211 RMPWEGTELKTARVTEDG----------------------RFADTR-----------T--------------LLGGPEEA 243 (662)
T ss_dssp CCTTTCEEEEEEEECTTS----------------------CEEEEE-----------E--------------EEEETTBC
T ss_pred CCCCCCcEEEEEEECCCC----------------------cccccE-----------E--------------eCCCCCce
Confidence 257777775000 000000 0 11123456
Q ss_pred eEEEEEccCCCEEEEEecCC--cEEEEEcCCCCccccccCCCC---------eeEEEECCCCCEEEEEEcCCceeeeeee
Q 014302 239 LSILKWSPTGDYFFAAKFDG--TFYLWETNTWTSEPWSSTSGF---------VTGATWDPEGRMILLAFAGSLTLGSIHF 307 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~---------v~~v~~spdg~~l~~~~~~~~~i~~~~~ 307 (427)
+..++|+|||++++++..++ .|++||+.+++...+..+... +..++|+|+++.++++.. +...+|.+
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~ 321 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGIL 321 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEE
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEE
Confidence 88899999999777888888 566666655554333322211 467889999998877654 45555544
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEE
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISL 375 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~ 375 (427)
......+ ..+ ..+.+.+..+ |+++++.++....+. + .+..|.+||+.++++..+
T Consensus 322 d~~~~~~----~~l-------~~~~~~~~~~-~s~~~~~~~~~~~~~-~-~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 322 DPESGEL----VDA-------AGPWTEWAAT-LTVSGTRAVGVAASP-R-TAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ETTTTEE----EEC-------CSSCCEEEEE-EEEETTEEEEEEEET-T-EEEEEEEEETTTCCEEEE
T ss_pred ECCCCcE----EEe-------cCCCCeEEEE-EecCCCEEEEEEcCC-C-CCCEEEEEECCCCceEEe
Confidence 3211100 000 0112245555 255666665543232 2 224577777777766544
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.32 E-value=1.4e-09 Score=106.62 Aligned_cols=236 Identities=12% Similarity=0.132 Sum_probs=149.5
Q ss_pred CCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccc
Q 014302 109 QHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASF 188 (427)
Q Consensus 109 p~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~ 188 (427)
|.+.++++...+++|.++|..+. +..... .....+..+.|+|||+.+++++.++.|.+||+.. .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~--~v~~~i-~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~---------~---- 228 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTY--EIKTVL-DTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWM---------K---- 228 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC--CEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEETTS---------S----
T ss_pred CCceEEEEeCCCCeEEEEECCCC--eEEEEE-eCCCCccceEECCCCCEEEEEcCCCeEEEEECCC---------C----
Confidence 44456677778899999998876 232222 2233567899999996666666668999999830 0
Q ss_pred cccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEc----cCCCEEEEE-ecCCcEEEE
Q 014302 189 LGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWS----PTGDYFFAA-KFDGTFYLW 263 (427)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~s----p~g~~l~~~-~~dg~v~iw 263 (427)
....+. .++. ......++|+ |||++++++ ..++.|.++
T Consensus 229 ----------t~~~v~--------------------------~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 229 ----------EPTTVA--------------------------EIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp ----------SCCEEE--------------------------EEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred ----------CCcEeE--------------------------EEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 000111 1111 2235678999 699999854 456999999
Q ss_pred EcCCCCcccccc-----------C-CCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeecc
Q 014302 264 ETNTWTSEPWSS-----------T-SGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTG 331 (427)
Q Consensus 264 d~~~~~~~~~~~-----------~-~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (427)
|..+.+...... | ...+..+..++++..+++...+.+.+.+++..+... + ....+..
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~-~----------~v~~i~~ 340 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN-L----------KTTEISA 340 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE-E----------EEEEEEC
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc-c----------eeeeeec
Confidence 998877643321 1 226778999999888888777778888888766420 0 0111222
Q ss_pred CCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeee-eeeeCCCCCCCceeEEeccCCCCCceeEEEe-
Q 014302 332 SQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLI-GFIRGPGDNPKPVAFSFHDKFKQGPLLSVCW- 409 (427)
Q Consensus 332 ~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~- 409 (427)
......+.|+|+|++++++..++ .+|.++|+.++++....+. |..-.++. ...+ ++|++ +.+++++.
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~s-----n~V~ViD~~t~kl~~~i~vgg~~Phpg~---g~~~-~~p~~--g~v~~t~~~ 409 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANAR-----NKLVVIDTKEGKLVAIEDTGGQTPHPGR---GANF-VHPTF--GPVWATSHM 409 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSSBCCTT---CEEE-EETTT--EEEEEEEBS
T ss_pred cccccCceECCCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEeccCcCCCCcc---ceee-ECCCC--CcEEEeCCC
Confidence 23567889999999998865444 3599999999987765554 32111111 1112 46652 44544442
Q ss_pred eCceEEEEec
Q 014302 410 SSGFCCTYPL 419 (427)
Q Consensus 410 ~~g~i~~~~~ 419 (427)
.++.|.+++.
T Consensus 410 g~~~Vsvid~ 419 (567)
T 1qks_A 410 GDDSVALIGT 419 (567)
T ss_dssp SSSEEEEEEC
T ss_pred CCCeEEEecC
Confidence 4578888763
No 182
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.30 E-value=6.6e-10 Score=105.04 Aligned_cols=259 Identities=12% Similarity=0.069 Sum_probs=151.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCC--eEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG--GICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~--~i~iw~~~~~~~~ 178 (427)
....|+|+++|+++++...++.|++||.+.. ....+... ..... ++|+|++..++++..++ .|.+|+..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g--~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~----- 202 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDN--KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA----- 202 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTT--EEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG-----
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCC--EEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcC-----
Confidence 5789999999998877777899999998765 23222222 22233 99999995555555444 56666654
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDG 258 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg 258 (427)
.+ ........+. .........++++|++..|+.+..++
T Consensus 203 ----~~-------------~~~~~~g~~~-------------------------~~~~~~p~~iav~p~~g~lyv~d~~~ 240 (409)
T 3hrp_A 203 ----SG-------------WAPTRIGQLG-------------------------STFSGKIGAVALDETEEWLYFVDSNK 240 (409)
T ss_dssp ----GT-------------TCEEEEEECC-------------------------TTSCSCCCBCEECTTSSEEEEECTTC
T ss_pred ----CC-------------ceeEEeeecc-------------------------chhcCCcEEEEEeCCCCeEEEEECCC
Confidence 00 0000000000 00123456788999666666677788
Q ss_pred cEEEEEcCCCCcccc----c-cCCCCe-e-EEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccce-eec
Q 014302 259 TFYLWETNTWTSEPW----S-STSGFV-T-GATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIV-SLT 330 (427)
Q Consensus 259 ~v~iwd~~~~~~~~~----~-~~~~~v-~-~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 330 (427)
.|+.||..+.....+ . ...... . .++|+|++..|+++......|+.++.......+.++....-..... ...
T Consensus 241 ~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~ 320 (409)
T 3hrp_A 241 NFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEA 320 (409)
T ss_dssp EEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGC
T ss_pred cEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCccccc
Confidence 999999887664333 1 222222 2 9999997667776666666777776544311111111000000000 000
Q ss_pred cCCceeEEEECCCCCEEEEEEecC-CCcceeEEEEEEeccCceEEEeee----eeeeCC---CCCCCceeEEeccCCCCC
Q 014302 331 GSQGIEKIAWDASGERLAVSYKGG-DDIYKGLIAIYDARRTPLISLSLI----GFIRGP---GDNPKPVAFSFHDKFKQG 402 (427)
Q Consensus 331 ~~~~i~~v~~sp~g~~La~~~~~~-~d~~~g~i~vwd~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~f~~~~~~g 402 (427)
.-.....++|+|+|+++++ +. .. +.|+.|++.++.+..+.-. |+..+. .....|..+++.++ |
T Consensus 321 ~~~~P~gia~d~dG~lyva---d~~~~---~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~---g 391 (409)
T 3hrp_A 321 LFAQPNGMTVDEDGNFYIV---DGFKG---YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE---G 391 (409)
T ss_dssp BCSSEEEEEECTTCCEEEE---ETTTT---CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS---S
T ss_pred EeCCCeEEEEeCCCCEEEE---eCCCC---CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC---C
Confidence 0125789999999996555 44 44 5699999877765433221 111111 11234778888875 7
Q ss_pred ceeEEEeeCceEEEEec
Q 014302 403 PLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 403 ~~l~v~~~~g~i~~~~~ 419 (427)
.++...+.+++|..+.+
T Consensus 392 ~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 392 GYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEESTTCEEEEEEE
T ss_pred CEEEEECCCCeEEEEEe
Confidence 88888888999988764
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.29 E-value=7e-10 Score=103.14 Aligned_cols=243 Identities=13% Similarity=0.052 Sum_probs=136.8
Q ss_pred eeEEcCCCCEEEEEe----------CCCeEEEEEccCCCCcceeecc-C-----CcCCeeEEEEccCCCceEEEec--CC
Q 014302 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSGKDACILTS-D-----SQRDVKVLEWRPNGGRSLSVGC--KG 165 (427)
Q Consensus 104 ~l~~sp~g~~lat~~----------~d~~v~vwd~~~~~~~~~~~~~-~-----~~~~v~~l~~sp~~~~~la~g~--~~ 165 (427)
.++|+|||++|+++. .+++|.+||..+. +...... . +......++++|||+.++++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~--~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL--TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC--CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC--cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCC
Confidence 789999999998876 2678999998765 2221111 1 2345678999999955554442 47
Q ss_pred eEEEEeccCCCCccccccCcccccccccCCCCcceeEeeh-hcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEE
Q 014302 166 GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDF-LRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKW 244 (427)
Q Consensus 166 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~ 244 (427)
.|.+||+. ++ ..+.. +.. .+...+.+
T Consensus 132 ~v~v~d~~---------~~----------------~~~~~~i~~----------------------------~~~~~v~~ 158 (361)
T 2oiz_A 132 SIGIVDVA---------KG----------------DYVEDVTAA----------------------------AGCWSVIP 158 (361)
T ss_dssp EEEEEETT---------TT----------------EEEEEEGGG----------------------------TTEEEEEE
T ss_pred eEEEEECC---------CC----------------cEEEEEecC----------------------------CCcceeEE
Confidence 89999997 11 12221 111 11122344
Q ss_pred ccCC-CEEEEEecCCcEEEEEcCC-CCcc-------ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcc
Q 014302 245 SPTG-DYFFAAKFDGTFYLWETNT-WTSE-------PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 245 sp~g-~~l~~~~~dg~v~iwd~~~-~~~~-------~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~ 315 (427)
.|++ ..+++.+.||.+.+|++.. ++.. .+...... ..+.+++++..+++.+. ++.++.+++........
T Consensus 159 ~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~v~v~d~~~~~~~~~ 236 (361)
T 2oiz_A 159 QPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSY-YGNVYSADFSGDEVKVD 236 (361)
T ss_dssp CTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBT-TSEEEEEECSSSSCEEE
T ss_pred cCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeC-CCeEEEEEecCCCceec
Confidence 5554 3445666677777776643 2211 11111111 23344677877776654 45788888764321110
Q ss_pred ccccccccccceeecc---CCceeEEEECCCCCEEEEEEe-cCCC----cceeEEEEEEeccCceEEEeeeeeeeCCCCC
Q 014302 316 AHLLPVDLPDIVSLTG---SQGIEKIAWDASGERLAVSYK-GGDD----IYKGLIAIYDARRTPLISLSLIGFIRGPGDN 387 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~---~~~i~~v~~sp~g~~La~~~~-~~~d----~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~ 387 (427)
.. +.+........ ......++|+|+++++.++.. .+.+ ....+|.+||+.+++.+...+ ...
T Consensus 237 ~~---~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-----~~~-- 306 (361)
T 2oiz_A 237 GP---WSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-----GRD-- 306 (361)
T ss_dssp EE---EESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-----CTT--
T ss_pred cc---ccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-----cCC--
Confidence 00 00000000000 012234789999999888643 1110 001469999999988764332 222
Q ss_pred CCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 388 PKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 388 ~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
+..++|.|+ |..|.++.. +.|.+|+.
T Consensus 307 --p~~ia~spd---g~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 307 --ALSMTIDQQ---RNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp --CCEEEEETT---TTEEEEECS-SCEEEEEC
T ss_pred --eeEEEECCC---CCEEEEeCC-CeEEEEEC
Confidence 668999996 667777765 99999974
No 184
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.28 E-value=1.2e-09 Score=99.01 Aligned_cols=246 Identities=12% Similarity=0.191 Sum_probs=147.2
Q ss_pred ceeeeEEcCCCCEEEE-------EeCCCeEEEEEccCCCCcceeecc----CCcCCeeEEEEccC-CCceEEEecCCeEE
Q 014302 101 DLQGVSWHQHKHIVAF-------ISGSTQVIVRDYEDSGKDACILTS----DSQRDVKVLEWRPN-GGRSLSVGCKGGIC 168 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat-------~~~d~~v~vwd~~~~~~~~~~~~~----~~~~~v~~l~~sp~-~~~~la~g~~~~i~ 168 (427)
...+++|+++|.++++ +..++.|.+|+...+ ....... ++...+.+++++++ + .++++...++|.
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~i~~~~~~g-~l~v~~~~~~l~ 95 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG--KKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLGLL 95 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTC--CEEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCC--cEEEEEecccCCCCCCCceEEEecCCC-cEEEEECCCCEE
Confidence 3578999999987777 567889999987665 2222221 24467899999999 6 666666556788
Q ss_pred EEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCC
Q 014302 169 IWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTG 248 (427)
Q Consensus 169 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g 248 (427)
+|+.+ +. ..... .... .+ .....+..++++++|
T Consensus 96 ~~d~~--g~----------------------~~~~~-~~~~------------~~----------~~~~~~~~i~~d~~g 128 (314)
T 1pjx_A 96 VVQTD--GT----------------------FEEIA-KKDS------------EG----------RRMQGCNDCAFDYEG 128 (314)
T ss_dssp EEETT--SC----------------------EEECC-SBCT------------TS----------CBCBCCCEEEECTTS
T ss_pred EEeCC--CC----------------------EEEEE-eccC------------CC----------ccccCCcCEEECCCC
Confidence 88764 11 00000 0000 00 012346678889998
Q ss_pred CEEEEEecC---------------CcEEEEEcCCCCccccccCCCCeeEEEEC----CCCCEEEEEEcCCceeeeeeeCC
Q 014302 249 DYFFAAKFD---------------GTFYLWETNTWTSEPWSSTSGFVTGATWD----PEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 249 ~~l~~~~~d---------------g~v~iwd~~~~~~~~~~~~~~~v~~v~~s----pdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
+.+++...+ +.|..||.. ++......+......++|+ |+|+.|+++....+.++.++...
T Consensus 129 ~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~ 207 (314)
T 1pjx_A 129 NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG 207 (314)
T ss_dssp CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE
T ss_pred CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCC
Confidence 877665544 467777654 4333333334456789999 99988777766666788777652
Q ss_pred CCCCccccccccccccceeeccC--CceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCC
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGS--QGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDN 387 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~--~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~ 387 (427)
. ..+..... ...+... ..+..++++++|+++++... + +.|.+||..++..+.. +..+.
T Consensus 208 ~-g~~~~~~~------~~~~~~~~~~~p~~i~~d~~G~l~v~~~~---~---~~i~~~d~~~g~~~~~-----~~~~~-- 267 (314)
T 1pjx_A 208 P-AKIENKKV------WGHIPGTHEGGADGMDFDEDNNLLVANWG---S---SHIEVFGPDGGQPKMR-----IRCPF-- 267 (314)
T ss_dssp T-TEEEEEEE------EEECCCCSSCEEEEEEEBTTCCEEEEEET---T---TEEEEECTTCBSCSEE-----EECSS--
T ss_pred C-CccccceE------EEECCCCCCCCCCceEECCCCCEEEEEcC---C---CEEEEEcCCCCcEeEE-----EeCCC--
Confidence 1 00000000 0011111 35788999999988877422 2 4599999886654322 11221
Q ss_pred CCceeEEeccCCCCCceeEEE-eeCceEEEEecc
Q 014302 388 PKPVAFSFHDKFKQGPLLSVC-WSSGFCCTYPLI 420 (427)
Q Consensus 388 ~~~~~~~f~~~~~~g~~l~v~-~~~g~i~~~~~~ 420 (427)
..+.+++|.++ |..|.++ ..++.|..|++-
T Consensus 268 ~~~~~i~~~~d---g~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 268 EKPSNLHFKPQ---TKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp SCEEEEEECTT---SSEEEEEETTTTEEEEEECS
T ss_pred CCceeEEECCC---CCEEEEEeCCCCeEEEEeCC
Confidence 34678888664 6645444 445788888754
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.26 E-value=7.7e-10 Score=112.21 Aligned_cols=234 Identities=10% Similarity=0.074 Sum_probs=133.3
Q ss_pred cCCCCEEEEEeCCC---eEEEEEccCCCCcceeecc------CCcCCeeEEEEccCCCceEE-E----ecC-CeEEEEec
Q 014302 108 HQHKHIVAFISGST---QVIVRDYEDSGKDACILTS------DSQRDVKVLEWRPNGGRSLS-V----GCK-GGICIWAP 172 (427)
Q Consensus 108 sp~g~~lat~~~d~---~v~vwd~~~~~~~~~~~~~------~~~~~v~~l~~sp~~~~~la-~----g~~-~~i~iw~~ 172 (427)
+|+|++++....++ .-.||...........+.. +|...+.+++||||| +.|| + |++ ..|++||+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEET
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEEC
Confidence 48899888776543 3456665533222333322 355578999999999 5555 2 222 57999999
Q ss_pred cCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE
Q 014302 173 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF 252 (427)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~ 252 (427)
. ++ + ... ..+ +. ......++|+|||+.|+
T Consensus 155 ~---------tg--------------~--~~~--~~~----------------------~~--~~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 155 D---------SG--------------E--WSK--VDV----------------------IE--GGKYATPKWTPDSKGFY 183 (695)
T ss_dssp T---------TC--------------C--BCS--SCC----------------------BS--CCTTCCCEECTTSSEEE
T ss_pred C---------CC--------------C--CcC--Ccc----------------------cC--cccccceEEecCCCEEE
Confidence 7 11 0 000 000 00 00124678999999999
Q ss_pred EEecCCc-------------EEEEEcCCCCcc-ccc----cCCCCeeEEEECCCCCEEEEEEcCC-c--eeeeeeeCCCC
Q 014302 253 AAKFDGT-------------FYLWETNTWTSE-PWS----STSGFVTGATWDPEGRMILLAFAGS-L--TLGSIHFASKP 311 (427)
Q Consensus 253 ~~~~dg~-------------v~iwd~~~~~~~-~~~----~~~~~v~~v~~spdg~~l~~~~~~~-~--~i~~~~~~~~~ 311 (427)
.++.|.. |++|++.+.... ... .+...+..+.|||||++|+++.... . .+++++....
T Consensus 184 ~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~- 262 (695)
T 2bkl_A 184 YEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK- 262 (695)
T ss_dssp EEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS-
T ss_pred EEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC-
Confidence 8777665 999999887642 111 3446788999999999998876554 2 4444422111
Q ss_pred CCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecC-CCcceeEEEEEEeccCce---EEEeeeeeeeCCCCC
Q 014302 312 PSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGG-DDIYKGLIAIYDARRTPL---ISLSLIGFIRGPGDN 387 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~-~d~~~g~i~vwd~~~~~~---~~~~~~~~~~~~~~~ 387 (427)
.+ .........+....| ++|+ |++..... .+ +.|.+||+.++.. ..+.+ ....
T Consensus 263 -~~-----------~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~---~~l~~~d~~~~~~~~~~~l~~------~~~~ 319 (695)
T 2bkl_A 263 -DF-----------RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPR---QRVFEVDPAKPARASWKEIVP------EDSS 319 (695)
T ss_dssp -SC-----------EEEEECSSCCEEEEE-ETTE-EEEEECTTCTT---CEEEEEBTTBCSGGGCEEEEC------CCSS
T ss_pred -ce-----------EEeecCCCceEEEEe-cCCc-EEEEECCCCCC---CEEEEEeCCCCCccCCeEEec------CCCC
Confidence 00 001112224455556 6777 55532211 22 6799999977642 32221 1111
Q ss_pred CCceeEEeccCCCCCceeEEEeeCceEEEEeccc
Q 014302 388 PKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIF 421 (427)
Q Consensus 388 ~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~ 421 (427)
.....++|. .+.++.....+|...++-+-.
T Consensus 320 ~~l~~~~~~----~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 320 ASLLSVSIV----GGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp CEEEEEEEE----TTEEEEEEEETTEEEEEEEET
T ss_pred CeEEEEEEE----CCEEEEEEEECCEEEEEEEeC
Confidence 112234554 366788887888877775543
No 186
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.26 E-value=9.6e-10 Score=98.51 Aligned_cols=198 Identities=10% Similarity=0.069 Sum_probs=121.9
Q ss_pred ceeeeEE-cCCCCEEEEEeC-CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCC
Q 014302 101 DLQGVSW-HQHKHIVAFISG-STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~-sp~g~~lat~~~-d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~ 177 (427)
.+.++++ .+++.++++... ++.|++|+.+.. ........+...+.+++++|+| +++++. .++.|.+|+.+
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~--~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~---- 150 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ--FVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQN---- 150 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTTSC--EEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTT----
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc--EEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCC----
Confidence 5789999 577776666643 889999984322 2222223344578999999999 566655 45889999864
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD 257 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 257 (427)
+. ....+.. ..+...+..++++|+|+.+++...+
T Consensus 151 -------------------g~---~~~~~~~------------------------~~~~~~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 151 -------------------GN---VLHKFGC------------------------SKHLEFPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp -------------------SC---EEEEEEC------------------------TTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred -------------------CC---EEEEeCC------------------------CCccCCcEEEEECCCCCEEEEECCC
Confidence 00 0110000 0112356789999999877777788
Q ss_pred CcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCce
Q 014302 258 GTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGI 335 (427)
Q Consensus 258 g~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 335 (427)
+.|++||........+. .+...+..++++++|+.+++...+...+.+|+.... .... .........+
T Consensus 185 ~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~---~~~~--------~~~~~~~~~~ 253 (286)
T 1q7f_A 185 HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ---LISA--------LESKVKHAQC 253 (286)
T ss_dssp TEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC---EEEE--------EEESSCCSCE
T ss_pred CEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC---EEEE--------EcccCCCCcc
Confidence 99999997543222222 223578899999999877654333236666653221 1000 0000111247
Q ss_pred eEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 336 EKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 336 ~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
.+++++|+|+++++ +. + ++|++|++..
T Consensus 254 ~~i~~~~~g~l~vs---~~-~---~~v~v~~~~~ 280 (286)
T 1q7f_A 254 FDVALMDDGSVVLA---SK-D---YRLYIYRYVQ 280 (286)
T ss_dssp EEEEEETTTEEEEE---ET-T---TEEEEEECSC
T ss_pred eeEEECCCCcEEEE---CC-C---CeEEEEEccc
Confidence 89999999986655 22 3 5699999754
No 187
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.24 E-value=1e-08 Score=92.41 Aligned_cols=235 Identities=12% Similarity=0.128 Sum_probs=138.0
Q ss_pred eeeeEEcCCCC-EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 102 LQGVSWHQHKH-IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 102 V~~l~~sp~g~-~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.-+..|+|++. ++++...++.|..||.... .... ......+.+++|+|+| .++++. +++|.+|+.+
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~--~~~~--~~~~~~~~~i~~~~dG-~l~v~~-~~~l~~~d~~------- 81 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTK--QVQR--VTMDAPVSSVALRQSG-GYVATI-GTKFCALNWK------- 81 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTC--CEEE--EECSSCEEEEEEBTTS-SEEEEE-TTEEEEEETT-------
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCC--cEEE--EeCCCceEEEEECCCC-CEEEEE-CCeEEEEECC-------
Confidence 35788999655 5566667899999998765 2222 2234679999999999 455544 6788899876
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC---
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD--- 257 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d--- 257 (427)
++ ....+.. .+.+. ....+..++++|+|+++++....
T Consensus 82 --~g--------------~~~~~~~--------------~~~~~----------~~~~~~di~~d~dG~l~~~~~~~~~~ 121 (297)
T 3g4e_A 82 --EQ--------------SAVVLAT--------------VDNDK----------KNNRFNDGKVDPAGRYFAGTMAEETA 121 (297)
T ss_dssp --TT--------------EEEEEEE--------------CCTTC----------SSEEEEEEEECTTSCEEEEEEECCSB
T ss_pred --CC--------------cEEEEEe--------------cCCCC----------CCCCCCCEEECCCCCEEEecCCcccc
Confidence 11 1111110 00000 01235678888998866643221
Q ss_pred ------CcEEEEEcCCC-CccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeec
Q 014302 258 ------GTFYLWETNTW-TSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLT 330 (427)
Q Consensus 258 ------g~v~iwd~~~~-~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (427)
..-.||.+... +.............++|+||++.|+++....+.|+.+++......+........+ ..
T Consensus 122 ~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~-----~~ 196 (297)
T 3g4e_A 122 PAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL-----EK 196 (297)
T ss_dssp TTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC-----CG
T ss_pred cccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC-----CC
Confidence 23455555432 2222233344567899999999988777766788888774222211110000000 01
Q ss_pred cCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEec-cCCCCCceeEEEe
Q 014302 331 GSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFH-DKFKQGPLLSVCW 409 (427)
Q Consensus 331 ~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~~~~g~~l~v~~ 409 (427)
..+.+..++++++|++.++...+ +.|.+||..+++++.. +..+. ..+.+++|. |+ +..|-|..
T Consensus 197 ~~~~p~g~~~d~~G~lwva~~~~------~~v~~~d~~tG~~~~~-----i~~p~--~~~t~~~f~g~d---~~~L~vt~ 260 (297)
T 3g4e_A 197 EEQIPDGMCIDAEGKLWVACYNG------GRVIRLDPVTGKRLQT-----VKLPV--DKTTSCCFGGKN---YSEMYVTC 260 (297)
T ss_dssp GGCEEEEEEEBTTSCEEEEEETT------TEEEEECTTTCCEEEE-----EECSS--SBEEEEEEESGG---GCEEEEEE
T ss_pred CCCCCCeeEECCCCCEEEEEcCC------CEEEEEcCCCceEEEE-----EECCC--CCceEEEEeCCC---CCEEEEEc
Confidence 22367899999999877764332 4599999987776532 22222 236788997 54 44555554
Q ss_pred e
Q 014302 410 S 410 (427)
Q Consensus 410 ~ 410 (427)
.
T Consensus 261 ~ 261 (297)
T 3g4e_A 261 A 261 (297)
T ss_dssp B
T ss_pred C
Confidence 4
No 188
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.24 E-value=3.1e-10 Score=105.21 Aligned_cols=187 Identities=11% Similarity=0.026 Sum_probs=119.4
Q ss_pred CCCCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCC---------CcceeeccCCcCCeeEEEEccCCCceEEEecCCeE
Q 014302 97 LPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSG---------KDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGI 167 (427)
Q Consensus 97 l~~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~---------~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i 167 (427)
+....++.+++++...++++|+.+ .++||+++... .+. .....+.. |+.++| |+ .+|+++.++.|
T Consensus 35 l~~~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~-~~~~~lp~-V~~l~f--d~-~~L~v~~~~~l 108 (388)
T 1xip_A 35 LPFASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTF-KWEKEIPD-VIFVCF--HG-DQVLVSTRNAL 108 (388)
T ss_dssp CCSSCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCC-SEEEECTT-EEEEEE--ET-TEEEEEESSEE
T ss_pred CCcccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccc-eEEeeCCC-eeEEEE--CC-CEEEEEcCCcE
Confidence 344479999999999999999987 45569876431 111 12234566 999999 77 67777777999
Q ss_pred EEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC
Q 014302 168 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT 247 (427)
Q Consensus 168 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~ 247 (427)
++|++.. . . .+..+..+..++..+.+.+.
T Consensus 109 ~v~dv~s---------l----------------------~--------------------~~~~~~~~~~~v~~i~~~~p 137 (388)
T 1xip_A 109 YSLDLEE---------L----------------------S--------------------EFRTVTSFEKPVFQLKNVNN 137 (388)
T ss_dssp EEEESSS---------T----------------------T--------------------CEEEEEECSSCEEEEEECSS
T ss_pred EEEEchh---------h----------------------h--------------------ccCccceeecceeeEEecCC
Confidence 9999870 0 0 00112223334555555543
Q ss_pred CCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccce
Q 014302 248 GDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIV 327 (427)
Q Consensus 248 g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
.+++++.||.|.+||+..+.... +...|.+++|||+| ++.+..+ +.+.++.........+ ...+.. +...
T Consensus 138 --~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~d-g~i~~~~~~~~~~~~k-~~I~~P-p~~~ 207 (388)
T 1xip_A 138 --TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKD-RSFQSFAWRNGEMEKQ-FEFSLP-SELE 207 (388)
T ss_dssp --EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETT-SCEEEEEEETTEEEEE-EEECCC-HHHH
T ss_pred --CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcC-CcEEEEcCCCcccccc-ceecCC-cccc
Confidence 38888999999999998776543 45689999999999 4555444 4777775544310000 001000 0000
Q ss_pred -eeccCCceeEEEECCCCCEEEEE
Q 014302 328 -SLTGSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 328 -~~~~~~~i~~v~~sp~g~~La~~ 350 (427)
...+...|.++.|.+++.+|++-
T Consensus 208 ~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 208 ELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp TSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cccCCCeeEEEEEEecCCeEEEEE
Confidence 01134589999999999999873
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=3.7e-08 Score=88.30 Aligned_cols=256 Identities=10% Similarity=0.029 Sum_probs=151.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceee-ccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACIL-TSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~-~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
.+.+++++++|+++++...++.|.+||.. . ..... ...+...+.++++.+++ .++++.. .+.|..|+.+ +..
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~--~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~--g~~ 89 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-G--KITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRITKK--GII 89 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-C--CEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT--SCE
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-C--CeEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEECCC--CcE
Confidence 68999999999977766667899999877 4 22222 12245678999999998 5555554 5788888864 110
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCccc-------------Cce--EE--eccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGL-------------GTP--IR--RGFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~-------------~~~--~~--~~~~~v~~ 241 (427)
.... +.. ....+..+++.++|++... +.. +. .....+..
T Consensus 90 ----------------------~~~~-~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 90 ----------------------KEYT-LPN-PDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSF 145 (299)
T ss_dssp ----------------------EEEE-CSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEE
T ss_pred ----------------------EEEe-CCC-cCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCce
Confidence 0000 000 1233455555555543211 001 11 12345788
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCcccc--ccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccc
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW--SSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~--~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
++++++|+.+++...++.|..||. +++...+ ......+..++++++|+.++ +....+.+..++. +.. +..
T Consensus 146 i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~~~~~i~~~~~-~g~--~~~--- 217 (299)
T 2z2n_A 146 ITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWF-VEIIGNKIGRITT-SGE--ITE--- 217 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEE-EETTTTEEEEECT-TCC--EEE---
T ss_pred EEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEE-EccCCceEEEECC-CCc--EEE---
Confidence 999999987777766789999998 5554332 23445688999999998655 4444456776665 321 110
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCC
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKF 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 399 (427)
... ......+.+++++++|+.+++ ...+ +.|.+||. .+...... .+.....+.++++ ++
T Consensus 218 -~~~-----~~~~~~~~~i~~~~~g~l~v~---~~~~---~~i~~~d~-~g~~~~~~------~~~~~~~~~~i~~-~~- 276 (299)
T 2z2n_A 218 -FKI-----PTPNARPHAITAGAGIDLWFT---EWGA---NKIGRLTS-NNIIEEYP------IQIKSAEPHGICF-DG- 276 (299)
T ss_dssp -EEC-----SSTTCCEEEEEECSTTCEEEE---ETTT---TEEEEEET-TTEEEEEE------CSSSSCCEEEEEE-CS-
T ss_pred -EEC-----CCCCCCceeEEECCCCCEEEe---ccCC---ceEEEECC-CCceEEEe------CCCCCCccceEEe-cC-
Confidence 000 012236889999999996655 3222 45999998 34332221 1112234667888 43
Q ss_pred CCCceeEEEeeCceEEEEe
Q 014302 400 KQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 400 ~~g~~l~v~~~~g~i~~~~ 418 (427)
|.++... ..+.|..|+
T Consensus 277 --g~l~v~~-~~~~l~~~~ 292 (299)
T 2z2n_A 277 --ETIWFAM-ECDKIGKLT 292 (299)
T ss_dssp --SCEEEEE-TTTEEEEEE
T ss_pred --CCEEEEe-cCCcEEEEE
Confidence 5555444 456666654
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.22 E-value=4.3e-09 Score=96.40 Aligned_cols=239 Identities=10% Similarity=0.070 Sum_probs=145.0
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCccc
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~~ 180 (427)
...+++. ++++.++...++.|.+||..+. +..... ........+++++++ +++++. .++.|.+||..
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~--~~~~~i-~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~------- 113 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTF--KEVGRI-TGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPK------- 113 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTC--CEEEEE-ECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETT-------
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECccc--EEEEEc-CCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECC-------
Confidence 4667764 3445555666799999999876 332222 234568899999998 666666 56899999986
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEe--cCC
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAK--FDG 258 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~--~dg 258 (427)
++ .....+... . + .........+++ ++..|+++. .++
T Consensus 114 --t~----------------~~~~~i~~g-----------~-~---------~~~~~~p~~i~~--~~~~lyv~~~~~~~ 152 (328)
T 3dsm_A 114 --TY----------------EITGYIECP-----------D-M---------DMESGSTEQMVQ--YGKYVYVNCWSYQN 152 (328)
T ss_dssp --TT----------------EEEEEEECT-----------T-C---------CTTTCBCCCEEE--ETTEEEEEECTTCC
T ss_pred --CC----------------eEEEEEEcC-----------C-c---------cccCCCcceEEE--ECCEEEEEcCCCCC
Confidence 11 111111100 0 0 000012334555 455666554 488
Q ss_pred cEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcC---------CceeeeeeeCCCCCCccccccccccccceee
Q 014302 259 TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAG---------SLTLGSIHFASKPPSLDAHLLPVDLPDIVSL 329 (427)
Q Consensus 259 ~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (427)
.|.++|+.+++.............++++|+|++++++... .+.+..++..+.. +.. ....
T Consensus 153 ~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v~~---------~~~~ 221 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--VEK---------QFKF 221 (328)
T ss_dssp EEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--EEE---------EEEC
T ss_pred EEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--EEE---------EEec
Confidence 9999999988764444334456789999999866554332 1466666654431 100 0011
Q ss_pred ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEE-
Q 014302 330 TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVC- 408 (427)
Q Consensus 330 ~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~- 408 (427)
..+..+..++|+|++++|.++ .. . |.+||..++.+... .++.. ....|..+++.|. .+.+....
T Consensus 222 ~~g~~p~~la~~~d~~~lyv~--~~-~-----v~~~d~~t~~~~~~---~~~~~--~~~~p~gi~vdp~--~g~lyva~~ 286 (328)
T 3dsm_A 222 KLGDWPSEVQLNGTRDTLYWI--NN-D-----IWRMPVEADRVPVR---PFLEF--RDTKYYGLTVNPN--NGEVYVADA 286 (328)
T ss_dssp CTTCCCEEEEECTTSCEEEEE--SS-S-----EEEEETTCSSCCSS---CSBCC--CSSCEEEEEECTT--TCCEEEEEC
T ss_pred CCCCCceeEEEecCCCEEEEE--cc-E-----EEEEECCCCceeee---eeecC--CCCceEEEEEcCC--CCeEEEEcc
Confidence 112367999999999999884 32 2 99999988775311 11111 1234778999885 36677776
Q ss_pred ---eeCceEEEEec
Q 014302 409 ---WSSGFCCTYPL 419 (427)
Q Consensus 409 ---~~~g~i~~~~~ 419 (427)
+.+|.|.+|+.
T Consensus 287 ~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 287 IDYQQQGIVYRYSP 300 (328)
T ss_dssp TTSSSEEEEEEECT
T ss_pred cccccCCEEEEECC
Confidence 67899999975
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.22 E-value=2.3e-09 Score=108.94 Aligned_cols=212 Identities=8% Similarity=-0.016 Sum_probs=126.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCe----------------EEEEEccCCCCcceeeccC--CcCCeeEEEEccCCCceEEEe
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQ----------------VIVRDYEDSGKDACILTSD--SQRDVKVLEWRPNGGRSLSVG 162 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~----------------v~vwd~~~~~~~~~~~~~~--~~~~v~~l~~sp~~~~~la~g 162 (427)
.+..++|+|||+.|++++.++. |++|++.++......+... |...+..++|+|||+.++.+.
T Consensus 172 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 172 KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 4678999999999999988765 9999987763222233222 455678999999996555554
Q ss_pred c-----CCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccC
Q 014302 163 C-----KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFG 237 (427)
Q Consensus 163 ~-----~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~ 237 (427)
. +..+.+|++. .. . ..... ...+ ..+..+..
T Consensus 252 ~~~~~~~~~l~~~d~~---------~~--------------~----~~~~~--~~~~---------------~~l~~~~~ 287 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQ---------QE--------------S----NGITG--ILKW---------------VKLIDNFE 287 (710)
T ss_dssp ECSSSSCCEEEEEEGG---------GS--------------S----SSSCS--SCCC---------------EEEECSSS
T ss_pred EccCCCccEEEEEECc---------cc--------------c----cccCC--ccce---------------EEeeCCCC
Confidence 3 3467788876 10 0 00000 0000 01112222
Q ss_pred CeEEEEEccCCCEEEEEecC----CcEEEEEcCCCCc---cccccCCC--CeeEEEECCCCCEEEEEEcCC-ceeeeeee
Q 014302 238 GLSILKWSPTGDYFFAAKFD----GTFYLWETNTWTS---EPWSSTSG--FVTGATWDPEGRMILLAFAGS-LTLGSIHF 307 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~d----g~v~iwd~~~~~~---~~~~~~~~--~v~~v~~spdg~~l~~~~~~~-~~i~~~~~ 307 (427)
.+.. .|+|+|+.|+..+.. +.|.+||+.+... ..+..+.. .+..++|++++..+++...+. ..++++++
T Consensus 288 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 3333 488999988855443 3599999987653 23334433 678899997666555544333 23555554
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
.+... ...+. ...+.+..++++|+++.|+.++.+. ..+++|++||+.+++
T Consensus 367 ~~g~~-----~~~l~-------~~~~~v~~~~~s~d~~~l~~~~ss~--~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 367 ATGAL-----LKIFP-------LEVGSVVGYSGQKKDTEIFYQFTSF--LSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTCCE-----EEEEC-------CCSSEEEEEECCTTCSEEEEEEECS--SCCCEEEEEETTSSS
T ss_pred CCCCE-----EEecC-------CCCceEEEEecCCCCCEEEEEEeCC--CCCCEEEEEECCCCc
Confidence 33210 00010 0134678899999998887754332 234789999998876
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.20 E-value=1.4e-09 Score=111.02 Aligned_cols=230 Identities=10% Similarity=0.038 Sum_probs=131.3
Q ss_pred ceeeeEEcCCCCEEEEEeCC-----CeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCe---------
Q 014302 101 DLQGVSWHQHKHIVAFISGS-----TQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGG--------- 166 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~--------- 166 (427)
.+..++|||||++||.++.+ .+|++||+.++ +.... ..+...+..++|+|| +.++.+..++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg--~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG--KPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC--CEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 67899999999999987653 46999999887 22221 112222468899999 77777765532
Q ss_pred -----EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhccc-CCCceeeeEeCCCCCCcccCc--------e-
Q 014302 167 -----ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQ-NGEQITALSWGPDGRFPGLGT--------P- 231 (427)
Q Consensus 167 -----i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~--------~- 231 (427)
|.+|++. ++ ..+-..+ +... ....+..+.|+|||+++.... .
T Consensus 240 ~~~~~v~~~~lg---------t~------------~~~~~lv--~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l 296 (741)
T 1yr2_A 240 NYNQTVWLHRLG---------TP------------QSADQPV--FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTV 296 (741)
T ss_dssp CCCCEEEEEETT---------SC------------GGGCEEE--ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEE
T ss_pred CCCCEEEEEECC---------CC------------chhCEEE--eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceE
Confidence 6677765 11 0000111 1111 122467889999998643110 1
Q ss_pred ---------------EEeccCCeEEEEEccCCCEEEEEecC----CcEEEEEcCCCC--ccccc-cCCCCeeEEEECCCC
Q 014302 232 ---------------IRRGFGGLSILKWSPTGDYFFAAKFD----GTFYLWETNTWT--SEPWS-STSGFVTGATWDPEG 289 (427)
Q Consensus 232 ---------------~~~~~~~v~~~~~sp~g~~l~~~~~d----g~v~iwd~~~~~--~~~~~-~~~~~v~~v~~spdg 289 (427)
+..+...+... ++|+|+.|+..+.+ +.|.+||+.+.. ...+. .+...+..++|+ ++
T Consensus 297 ~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~ 374 (741)
T 1yr2_A 297 HVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN 374 (741)
T ss_dssp EEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT
T ss_pred EEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC
Confidence 11122223333 45899998866643 459999987742 22232 344456677887 34
Q ss_pred CEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 290 RMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 290 ~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
.+++....++...++.+.-. .. ....+. +...+.+..++++|+++.|+.++.+. ..+++|++||+.+
T Consensus 375 -~lv~~~~~dg~~~l~~~~~~-g~---~~~~l~------~~~~~~v~~~~~s~d~~~l~~~~ss~--~~P~~i~~~d~~t 441 (741)
T 1yr2_A 375 -RLFASYIHDAKSQVLAFDLD-GK---PAGAVS------LPGIGSASGLSGRPGDRHAYLSFSSF--TQPATVLALDPAT 441 (741)
T ss_dssp -EEEEEEEETTEEEEEEEETT-SC---EEEECB------CSSSCEEEEEECCBTCSCEEEEEEET--TEEEEEEEEETTT
T ss_pred -EEEEEEEECCEEEEEEEeCC-CC---ceeecc------CCCCeEEEEeecCCCCCEEEEEEcCC--CCCCEEEEEECCC
Confidence 44444444544433333211 00 000010 11234678899999998887654332 2358899999987
Q ss_pred Cce
Q 014302 370 TPL 372 (427)
Q Consensus 370 ~~~ 372 (427)
++.
T Consensus 442 g~~ 444 (741)
T 1yr2_A 442 AKT 444 (741)
T ss_dssp TEE
T ss_pred CcE
Confidence 664
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=1.4e-08 Score=99.65 Aligned_cols=258 Identities=11% Similarity=0.009 Sum_probs=149.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEcc--CCCCcceeeccCCcCCeeEEEEc----cCCCceEEEecC-CeEEEEecc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYE--DSGKDACILTSDSQRDVKVLEWR----PNGGRSLSVGCK-GGICIWAPS 173 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~--~~~~~~~~~~~~~~~~v~~l~~s----p~~~~~la~g~~-~~i~iw~~~ 173 (427)
.+..+.|+|||++|++++.|+.|.+||+. +. ....... .......++|+ |||+.++++... +++.++|..
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--~~v~~i~-~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--TTVAEIK-IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--CEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCC--cEeEEEe-cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 56789999999999999999999999985 33 2222221 12346789999 699555555444 889999976
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEec-cCCeEEEEEccCCCEEE
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRG-FGGLSILKWSPTGDYFF 252 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~-~~~v~~~~~sp~g~~l~ 252 (427)
+ ...+..+... .. ..++ ...| ...+..+..++++..++
T Consensus 275 ---------t----------------~~~~~~i~~~------~~--~~~~--------~~~~p~~rva~i~~s~~~~~~v 313 (567)
T 1qks_A 275 ---------T----------------LEPKKIQSTR------GM--TYDE--------QEYHPEPRVAAILASHYRPEFI 313 (567)
T ss_dssp ---------T----------------CCEEEEEECC------EE--CTTT--------CCEESCCCEEEEEECSSSSEEE
T ss_pred ---------C----------------CcEEEEEecc------cc--cccc--------ccccCCCceEEEEEcCCCCEEE
Confidence 1 1122211100 00 0000 0001 12456677888877655
Q ss_pred -EEecCCcEEEEEcCCCCccc--cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceee
Q 014302 253 -AAKFDGTFYLWETNTWTSEP--WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSL 329 (427)
Q Consensus 253 -~~~~dg~v~iwd~~~~~~~~--~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (427)
....+|.|.++|....+... ..........+.|+|+|++++++......+.+++..+.+. ... ++. ....
T Consensus 314 v~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl--~~~---i~v--gg~~ 386 (567)
T 1qks_A 314 VNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL--VAI---EDT--GGQT 386 (567)
T ss_dssp EEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEE---EEC--SSSS
T ss_pred EEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE--EEE---Eec--cCcC
Confidence 55667999999987654321 1234456778899999999998887777888888876421 000 000 0001
Q ss_pred ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce--EEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEE
Q 014302 330 TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL--ISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSV 407 (427)
Q Consensus 330 ~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v 407 (427)
.+.+.-..+ ++|++..+.++...++ ++|.|+|...... ..+.....+...+ ..++.+..||+ +..|-|
T Consensus 387 Phpg~g~~~-~~p~~g~v~~t~~~g~----~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~---~~~l~v 456 (567)
T 1qks_A 387 PHPGRGANF-VHPTFGPVWATSHMGD----DSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPN---SQYLYV 456 (567)
T ss_dssp BCCTTCEEE-EETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTT---CSEEEE
T ss_pred CCCccceee-ECCCCCcEEEeCCCCC----CeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCC---CCeEEE
Confidence 111111112 5788665544332222 4699999976210 0111112333322 22456778887 555777
Q ss_pred Eee-------CceEEEEec
Q 014302 408 CWS-------SGFCCTYPL 419 (427)
Q Consensus 408 ~~~-------~g~i~~~~~ 419 (427)
... .+.|.+|++
T Consensus 457 ~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 457 DATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp ECTTCSSHHHHTCEEEEEG
T ss_pred ecCCCCCcccCceEEEEEC
Confidence 652 458888875
No 194
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.14 E-value=2e-08 Score=93.17 Aligned_cols=253 Identities=10% Similarity=0.032 Sum_probs=146.9
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcccc
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASV 181 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~ 181 (427)
|+.++| |+.+|+++ .++.|++||+.... .......|...+.++.+.+. .++++..+|.+.+|++.
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~-------- 154 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELS--EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLR-------- 154 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTT--CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETT--------
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhh--ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEcc--------
Confidence 999999 99999999 88999999998773 22233456677888887755 36666788999999997
Q ss_pred ccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcEE
Q 014302 182 RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFY 261 (427)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~ 261 (427)
.+ .. . .+...|.+++|||+| ++.|..||+++
T Consensus 155 -~~----------------~~-----------------------------~-~~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 155 -TK----------------ST-----------------------------K-QLAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp -TC----------------CE-----------------------------E-EEEESEEEEEECSSE--EEEEETTSCEE
T ss_pred -CC----------------cc-----------------------------c-cccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 11 00 0 023478999999999 67889999999
Q ss_pred EEEcCCCCc---ccc------c---cCCCCeeEEEECCCCCEEEEEEcCC----------ceeeeeeeCCCCCCcccccc
Q 014302 262 LWETNTWTS---EPW------S---STSGFVTGATWDPEGRMILLAFAGS----------LTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 262 iwd~~~~~~---~~~------~---~~~~~v~~v~~spdg~~l~~~~~~~----------~~i~~~~~~~~~~~~~~~~~ 319 (427)
+|+...... ..+ . .|...|.+++|.++++++++=.... ..++++........+..-..
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~~~~~~~~~~~~~~ii~~~~~~~~f~~~~d 265 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSASFQETFD 265 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSSCCCCEEEEEEEEETTEEEEEEESS
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCCCcCcccCCcceEEEEEcCCCCceeEcccc
Confidence 999887763 122 1 3678999999999999887533221 13445441111111100000
Q ss_pred cc-ccccceeeccCCceeEEEECCCCCEEE-EEEecCCCcceeEEEEEEeccCceEEEee---eee--eeCC-CCCCCce
Q 014302 320 PV-DLPDIVSLTGSQGIEKIAWDASGERLA-VSYKGGDDIYKGLIAIYDARRTPLISLSL---IGF--IRGP-GDNPKPV 391 (427)
Q Consensus 320 ~~-~~~~~~~~~~~~~i~~v~~sp~g~~La-~~~~~~~d~~~g~i~vwd~~~~~~~~~~~---~~~--~~~~-~~~~~~~ 391 (427)
+. .+....+..+-....=-.|.|+.+.|+ +++..+.| |-|++-. ..+.... ... +... .++..|+
T Consensus 266 ~~~~fg~~~R~~~~~~~~l~~w~~~~~~l~iv~Ss~S~d-----i~il~~~--~~~~~~~Ds~Ra~lPl~~~~~~Dt~pi 338 (388)
T 1xip_A 266 ITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSE-----VSIWDSK--QVIEPSQDSERAVLPISEETDKDTNPI 338 (388)
T ss_dssp SCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSB-----CEEECSS--SEEEESSGGGCCBCCBCTTTCCBCCEE
T ss_pred CcCCcCCccCCceeeeeehhcccccCCcEEEEeCCCCcc-----eEEeccc--cEEeecCccccceeccCCCCCCCCcce
Confidence 00 000000000000122336777665544 45555555 6666422 1111100 000 0111 3445566
Q ss_pred eEEeccCCCC--------------CceeEEEeeCceEEEEeccccCCC
Q 014302 392 AFSFHDKFKQ--------------GPLLSVCWSSGFCCTYPLIFRSHL 425 (427)
Q Consensus 392 ~~~f~~~~~~--------------g~~l~v~~~~g~i~~~~~~~~~~~ 425 (427)
.+++.-.... -.+|.+=.++|.+..|-++|.+.+
T Consensus 339 G~alD~ss~~~v~~p~~g~e~~~plP~l~~L~~~G~L~~~~~~~~~~i 386 (388)
T 1xip_A 339 GVAVDVVTSGTILEPCSGVDTIERLPLVYILNNEGSLQIVGLFHVAAI 386 (388)
T ss_dssp EEEEECSCCC--------------CCEEEEEETTSEEEEEEEEC----
T ss_pred EEEEEcccCceecCCCCCcccCCCCCEEEEEcCCceEEEEEEEchhhh
Confidence 6665543221 124777789999999999987754
No 195
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.14 E-value=5.6e-09 Score=105.75 Aligned_cols=206 Identities=10% Similarity=0.065 Sum_probs=119.8
Q ss_pred ceeeeEEcCCCCEEEEEe-----CCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCC----------
Q 014302 101 DLQGVSWHQHKHIVAFIS-----GSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG---------- 165 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~-----~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~---------- 165 (427)
.+..++|||||++||.+. ...+|+|||+.++ +..... .+......++|+ |++.++.+..+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg--~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK--QPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC--SEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC--CCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 678899999999998653 2357999999887 222211 111113678999 996666666553
Q ss_pred ---eEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEe-ccCCeEE
Q 014302 166 ---GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRR-GFGGLSI 241 (427)
Q Consensus 166 ---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-~~~~v~~ 241 (427)
.|.+|++. +. ..+-.++. .. .. +...+..
T Consensus 206 ~~~~v~~~~lg---------t~------------~~~~~~v~--~~------------------------~~~~~~~~~~ 238 (693)
T 3iuj_A 206 DQHKVYFHRLG---------TA------------QEDDRLVF--GA------------------------IPAQHHRYVG 238 (693)
T ss_dssp CCCEEEEEETT---------SC------------GGGCEEEE--SC------------------------SGGGCCSEEE
T ss_pred CCcEEEEEECC---------CC------------cccceEEE--ec------------------------CCCCCeEEEE
Confidence 26666664 10 00000000 00 00 1123567
Q ss_pred EEEccCCCEEEEEec----CCcEEEEEcCCCC--ccccccCCCCeeEEEECCCCCEEEEEEcCC---ceeeeeeeCCCCC
Q 014302 242 LKWSPTGDYFFAAKF----DGTFYLWETNTWT--SEPWSSTSGFVTGATWDPEGRMILLAFAGS---LTLGSIHFASKPP 312 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~----dg~v~iwd~~~~~--~~~~~~~~~~v~~v~~spdg~~l~~~~~~~---~~i~~~~~~~~~~ 312 (427)
+.|||||++|+.... ...|+++|+.+.. ...+..+....... |+++|..|++.++.+ ..|+.+++.....
T Consensus 239 ~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 239 ATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp EEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred EEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 889999998874332 2479999997764 23444455555554 778888877766554 3566666654311
Q ss_pred CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 313 SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
. + + .....+...+. .|++++++|+.+...... ..|++|++..+...
T Consensus 318 ~---~-----~--~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~---~~l~~~d~~g~~~~ 363 (693)
T 3iuj_A 318 A---H-----W--RDLIPERQQVL--TVHSGSGYLFAEYMVDAT---ARVEQFDYEGKRVR 363 (693)
T ss_dssp G---G-----C--EEEECCCSSCE--EEEEETTEEEEEEEETTE---EEEEEECTTSCEEE
T ss_pred c---c-----c--EEEecCCCCEE--EEEEECCEEEEEEEECCe---eEEEEEECCCCeeE
Confidence 0 0 0 01111222333 899999999886544332 46999998765543
No 196
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.14 E-value=1e-08 Score=93.92 Aligned_cols=210 Identities=16% Similarity=0.117 Sum_probs=123.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeec--------cCCcCCeeEEEEcc-CCCceEEEe--cCCeEEE
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILT--------SDSQRDVKVLEWRP-NGGRSLSVG--CKGGICI 169 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~--------~~~~~~v~~l~~sp-~~~~~la~g--~~~~i~i 169 (427)
....++++|+|+++++...++.|++|+.+........+. ..+......++++| ++ .++++. .++.|.+
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQ 170 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEE
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEE
Confidence 578999999999888888899999998764411122221 23444688999999 66 666665 3688999
Q ss_pred EeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC-C
Q 014302 170 WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT-G 248 (427)
Q Consensus 170 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~-g 248 (427)
|+.+ +. .+..+... ..+. .....+......++++|+ +
T Consensus 171 ~~~~--g~------------------------~~~~~~~~-----------g~~~-----~~~~~~~~~p~gia~d~~~g 208 (329)
T 3fvz_A 171 FSPS--GK------------------------FVTQWGEE-----------SSGS-----SPRPGQFSVPHSLALVPHLD 208 (329)
T ss_dssp ECTT--SC------------------------EEEEECEE-----------CCSS-----SCCTTEESCEEEEEEETTTT
T ss_pred EcCC--CC------------------------EEEEeccC-----------CCCC-----CCCCcccCCCcEEEEECCCC
Confidence 9854 10 11111100 0000 000012234678999999 5
Q ss_pred CEEEEEecCCcEEEEEcCCCCccccc---cCCCCeeEEEECCCCCEEEEEE------cCCceeeeeeeCCCCCCcccccc
Q 014302 249 DYFFAAKFDGTFYLWETNTWTSEPWS---STSGFVTGATWDPEGRMILLAF------AGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 249 ~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~v~~v~~spdg~~l~~~~------~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
..+++...++.|++||..+++..... .+...+.+++|+| +..+...+ .....+++|+..+... .....
T Consensus 209 ~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~ 285 (329)
T 3fvz_A 209 QLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFK 285 (329)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEEC
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEc
Confidence 55557778889999999866653322 4566788999999 43333221 1112444554433210 00000
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
+ ...+...+..|+++|+|..+++ +..+ +.|++|++..
T Consensus 286 ~-------~~~~~~~p~~ia~~~dG~lyva---d~~~---~~I~~~~~~~ 322 (329)
T 3fvz_A 286 P-------VRKHFDMPHDIVASEDGTVYIG---DAHT---NTVWKFTLTE 322 (329)
T ss_dssp C-------SSSCCSSEEEEEECTTSEEEEE---ESSS---CCEEEEEEEE
T ss_pred C-------CCCccCCeeEEEECCCCCEEEE---ECCC---CEEEEEeCCc
Confidence 0 0012236899999999955544 4444 4599999864
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.14 E-value=5.4e-09 Score=92.57 Aligned_cols=198 Identities=12% Similarity=0.067 Sum_probs=124.4
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~~ 179 (427)
.+.+++++++|+++++.. ++.|.+|+.+.. ............+.++++.|+| .++++. ..+.|.+|+..
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~--~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~------ 137 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN--NQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAG------ 137 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEEECTTCS--CCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTT------
T ss_pred CcceeEECCCCCEEEEcC-CCEEEEEeCCCc--eEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECC------
Confidence 567899999999666555 889999887654 2222222333568999999998 455554 45788888654
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCc
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGT 259 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~ 259 (427)
.. .... . ..........++++++|+.+++...++.
T Consensus 138 ---~~----------------~~~~-~-------------------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 172 (270)
T 1rwi_B 138 ---SK----------------TQTV-L-------------------------PFTGLNDPDGVAVDNSGNVYVTDTDNNR 172 (270)
T ss_dssp ---CC----------------SCEE-C-------------------------CCCSCCSCCCEEECTTCCEEEEEGGGTE
T ss_pred ---Cc----------------eeEe-e-------------------------ccccCCCceeEEEeCCCCEEEEECCCCE
Confidence 00 0000 0 0001124567889999986666667889
Q ss_pred EEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEE
Q 014302 260 FYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKI 338 (427)
Q Consensus 260 v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 338 (427)
|.+||.......... .....+..++++++|..++ +...++.+..++........ . ...+...+.++
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v-~~~~~~~v~~~~~~~~~~~~----~--------~~~~~~~p~~i 239 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYV-TEHNTNQVVKLLAGSTTSTV----L--------PFTGLNTPLAV 239 (270)
T ss_dssp EEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEE-EETTTSCEEEECTTCSCCEE----C--------CCCSCSCEEEE
T ss_pred EEEEecCCCceEeecccCCCCceEEEECCCCCEEE-EECCCCcEEEEcCCCCccee----e--------ccCCCCCceeE
Confidence 999998766543322 3336788999999996554 44555567766654331100 0 00111368999
Q ss_pred EECCCCCEEEEEEecCCCcceeEEEEEEeccCce
Q 014302 339 AWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL 372 (427)
Q Consensus 339 ~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~ 372 (427)
+++++|+.+++ +..+ +.|++|++...+.
T Consensus 240 ~~~~~g~l~v~---~~~~---~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 240 AVDSDRTVYVA---DRGN---DRVVKLTSLEHHH 267 (270)
T ss_dssp EECTTCCEEEE---EGGG---TEEEEECCCGGGS
T ss_pred EECCCCCEEEE---ECCC---CEEEEEcCCCccc
Confidence 99999986655 3333 5699999876543
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.12 E-value=8.4e-09 Score=105.36 Aligned_cols=236 Identities=11% Similarity=0.060 Sum_probs=129.6
Q ss_pred cCCCCEEEEEeCCCe---EEEEEccCC---CCcceee------ccCCcCCeeEEEEccCCCceEEEecC-----CeEEEE
Q 014302 108 HQHKHIVAFISGSTQ---VIVRDYEDS---GKDACIL------TSDSQRDVKVLEWRPNGGRSLSVGCK-----GGICIW 170 (427)
Q Consensus 108 sp~g~~lat~~~d~~---v~vwd~~~~---~~~~~~~------~~~~~~~v~~l~~sp~~~~~la~g~~-----~~i~iw 170 (427)
+|+|++++....++. ..||..+.. ......+ ..+|...+..++|||||+.++.+..+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489998887755432 556766532 1222222 22344468899999999544444332 358889
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCE
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDY 250 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~ 250 (427)
|+. ++ +. .. .......+..++|+|| +.
T Consensus 195 dl~---------tg--------------~~--~~---------------------------~~~~~~~~~~~~wspD-~~ 221 (741)
T 1yr2_A 195 GVA---------DG--------------KP--LA---------------------------DELKWVKFSGLAWLGN-DA 221 (741)
T ss_dssp ETT---------TC--------------CE--EE---------------------------EEEEEEESCCCEESTT-SE
T ss_pred ECC---------CC--------------CC--CC---------------------------ccCCCceeccEEEECC-CE
Confidence 987 11 10 00 0000111245778888 88
Q ss_pred EEEEecCCc--------------EEEEEcCCCCcc-ccc----cCCCCeeEEEECCCCCEEEEEEcCC----ceeeeeee
Q 014302 251 FFAAKFDGT--------------FYLWETNTWTSE-PWS----STSGFVTGATWDPEGRMILLAFAGS----LTLGSIHF 307 (427)
Q Consensus 251 l~~~~~dg~--------------v~iwd~~~~~~~-~~~----~~~~~v~~v~~spdg~~l~~~~~~~----~~i~~~~~ 307 (427)
|+.++.++. |++|++.+.... ... .+...+..+.|||||++|++...+. ..++++++
T Consensus 222 l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~ 301 (741)
T 1yr2_A 222 LLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARV 301 (741)
T ss_dssp EEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEE
T ss_pred EEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEEC
Confidence 886665543 889998776642 111 2233588999999999998877543 36777777
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC--ceEEEeeeeeeeCCC
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT--PLISLSLIGFIRGPG 385 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~--~~~~~~~~~~~~~~~ 385 (427)
.+..... .. ........+... ++|+|+.|++....+.. .+.|.+||+.++ ....+.+ ..
T Consensus 302 ~~~~~~~---~~-------~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~--~~~l~~~d~~~~~~~~~~l~~-----~~- 362 (741)
T 1yr2_A 302 TNGKIGP---VT-------ALIPDLKAQWDF-VDGVGDQLWFVSGDGAP--LKKIVRVDLSGSTPRFDTVVP-----ES- 362 (741)
T ss_dssp ETTEECC---CE-------EEECSSSSCEEE-EEEETTEEEEEECTTCT--TCEEEEEECSSSSCEEEEEEC-----CC-
T ss_pred CCCCCcc---cE-------EecCCCCceEEE-EeccCCEEEEEECCCCC--CCEEEEEeCCCCccccEEEec-----CC-
Confidence 5531000 00 001111123333 34899999886443221 167999999774 2332221 11
Q ss_pred CCCCceeEEeccCCCCCceeEEEeeCceEEEEecc
Q 014302 386 DNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLI 420 (427)
Q Consensus 386 ~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~ 420 (427)
......+++. .+.++.....+|...+|-+-
T Consensus 363 -~~~l~~~~~~----~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 363 -KDNLESVGIA----GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp -SSEEEEEEEE----BTEEEEEEEETTEEEEEEEE
T ss_pred -CCeEEEEEEE----CCEEEEEEEECCEEEEEEEe
Confidence 1112234443 35677777778877766543
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.11 E-value=8.9e-08 Score=87.51 Aligned_cols=232 Identities=13% Similarity=0.104 Sum_probs=132.4
Q ss_pred eeeeEEcCCCC-EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 102 LQGVSWHQHKH-IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 102 V~~l~~sp~g~-~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
..+.+|+|++. ++.+...++.|.+|+...+ ..... .....+.+++|+|+| .++++. ..+|.+|+..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~--~~~~~--~~~~~v~~i~~~~dg-~l~v~~-~~gl~~~d~~------- 117 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASG--RKTVH--ALPFMGSALAKISDS-KQLIAS-DDGLFLRDTA------- 117 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTT--EEEEE--ECSSCEEEEEEEETT-EEEEEE-TTEEEEEETT-------
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCC--cEEEE--ECCCcceEEEEeCCC-eEEEEE-CCCEEEEECC-------
Confidence 46789999865 5556667889999988765 22222 234579999999999 555554 4568888875
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec----
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF---- 256 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~---- 256 (427)
++ ....+... +.+ .....+..++++|+|+++++...
T Consensus 118 --~g--------------~~~~~~~~--------------~~~----------~~~~~~~~i~~d~~G~l~v~~~~~~~~ 157 (326)
T 2ghs_A 118 --TG--------------VLTLHAEL--------------ESD----------LPGNRSNDGRMHPSGALWIGTMGRKAE 157 (326)
T ss_dssp --TC--------------CEEEEECS--------------STT----------CTTEEEEEEEECTTSCEEEEEEETTCC
T ss_pred --CC--------------cEEEEeeC--------------CCC----------CCCCCCCCEEECCCCCEEEEeCCCcCC
Confidence 11 11111000 000 00124667888999886664432
Q ss_pred --CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC-Cccccccccccccceee-ccC
Q 014302 257 --DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP-SLDAHLLPVDLPDIVSL-TGS 332 (427)
Q Consensus 257 --dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~ 332 (427)
.+.|..+| +++...+.........++|+|||+.|+++....+.|+.+++..... .+..... ...+ ...
T Consensus 158 ~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~------~~~~~~~~ 229 (326)
T 2ghs_A 158 TGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEV------FIDSTGIK 229 (326)
T ss_dssp TTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEE------EEECTTSS
T ss_pred CCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceE------EEECCCCC
Confidence 23455555 3333333233345678999999998887766666888887751111 1100000 0001 112
Q ss_pred CceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEec-cCCCCCceeEEEeeC
Q 014302 333 QGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFH-DKFKQGPLLSVCWSS 411 (427)
Q Consensus 333 ~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~~~~g~~l~v~~~~ 411 (427)
+.+..++++++|.+.++...+ +.|.+|+. .+..+.. +..+. ..+.+++|. ++ +..|.|+...
T Consensus 230 ~~p~gi~~d~~G~lwva~~~~------~~v~~~d~-~g~~~~~-----i~~~~--~~~~~~af~g~d---~~~L~vt~~~ 292 (326)
T 2ghs_A 230 GGMDGSVCDAEGHIWNARWGE------GAVDRYDT-DGNHIAR-----YEVPG--KQTTCPAFIGPD---ASRLLVTSAR 292 (326)
T ss_dssp SEEEEEEECTTSCEEEEEETT------TEEEEECT-TCCEEEE-----EECSC--SBEEEEEEESTT---SCEEEEEEBC
T ss_pred CCCCeeEECCCCCEEEEEeCC------CEEEEECC-CCCEEEE-----EECCC--CCcEEEEEecCC---CCEEEEEecC
Confidence 356789999999877764322 34999998 4444321 22222 236688887 54 4455555443
No 200
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.07 E-value=2e-08 Score=90.31 Aligned_cols=193 Identities=13% Similarity=0.135 Sum_probs=116.4
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccC----CcCCeeEEEEccCCCceEEEecC-C----------
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSD----SQRDVKVLEWRPNGGRSLSVGCK-G---------- 165 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~----~~~~v~~l~~sp~~~~~la~g~~-~---------- 165 (427)
.+.+++++|+|+++++...++.|.+||..++. ...+... ....+.+++++|+| +++++... +
T Consensus 70 ~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 70 HQNGHCLNKQGHLIACSHGLRRLERQREPGGE--WESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp SEEEEEECTTCCEEEEETTTTEEEEECSTTCC--EEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCC
T ss_pred CcceeeECCCCcEEEEecCCCeEEEEcCCCCc--EEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccc
Confidence 58899999999988877777899999986652 2222111 12356789999999 56665211 1
Q ss_pred -----eEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeE
Q 014302 166 -----GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLS 240 (427)
Q Consensus 166 -----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~ 240 (427)
.-.||.++ ++|+. ..+..+.....
T Consensus 147 ~~~~~~~~l~~~~-----------------------------------------------~~g~~----~~~~~~~~~~~ 175 (296)
T 3e5z_A 147 EMELPGRWVFRLA-----------------------------------------------PDGTL----SAPIRDRVKPN 175 (296)
T ss_dssp CCCSSSCEEEEEC-----------------------------------------------TTSCE----EEEECCCSSEE
T ss_pred cccCCCcEEEEEC-----------------------------------------------CCCCE----EEeecCCCCCc
Confidence 12344443 11100 01111233457
Q ss_pred EEEEccCCCEEEEEecCCcEEEEEcC-CCCc----cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcc
Q 014302 241 ILKWSPTGDYFFAAKFDGTFYLWETN-TWTS----EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~dg~v~iwd~~-~~~~----~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~ 315 (427)
.++|+|+|+.|++.+.++.|++||+. .++. ..+..+...+..++++++|+.+++. ++.+.+|+...+ .
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~---~~~v~~~~~~g~---~- 248 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA---GDGVHVLTPDGD---E- 248 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE---TTEEEEECTTSC---E-
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc---CCeEEEECCCCC---E-
Confidence 89999999988777778999999986 3332 1112244556789999999876644 335665554321 1
Q ss_pred ccccccccccceeeccCCceeEEEE-CCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAW-DASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~-sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
...+.....+.+++| +|+++.|.++. .+ .|.-++.++..
T Consensus 249 ----------~~~~~~~~~~~~~~f~~~d~~~L~v~t---~~----~l~~~~~~~~~ 288 (296)
T 3e5z_A 249 ----------LGRVLTPQTTSNLCFGGPEGRTLYMTV---ST----EFWSIETNVRG 288 (296)
T ss_dssp ----------EEEEECSSCCCEEEEESTTSCEEEEEE---TT----EEEEEECSCCB
T ss_pred ----------EEEEECCCCceeEEEECCCCCEEEEEc---CC----eEEEEEccccc
Confidence 111111113789999 69999998852 22 25555665544
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.06 E-value=2.9e-08 Score=90.84 Aligned_cols=206 Identities=8% Similarity=0.011 Sum_probs=124.3
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCccee-eccCC----cCCeeEEEEccCCCceEEEec--CCeEEEEecc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACI-LTSDS----QRDVKVLEWRPNGGRSLSVGC--KGGICIWAPS 173 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~-~~~~~----~~~v~~l~~sp~~~~~la~g~--~~~i~iw~~~ 173 (427)
....+++++++++.++...++.|.+||..+. .... +..+. ......+++ .++ +++++.. ++.|.++|..
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~--~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTY--EITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTT--EEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETT
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCC--eEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECC
Confidence 5788999999954444447899999998876 2221 11111 114566777 344 6666653 6889999986
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEE
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFA 253 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~ 253 (427)
++ .....+. . ......++++|+|+++++
T Consensus 161 ---------t~----------------~~~~~i~--------------------------~-g~~p~~i~~~~dG~l~v~ 188 (328)
T 3dsm_A 161 ---------TD----------------KVVDELT--------------------------I-GIQPTSLVMDKYNKMWTI 188 (328)
T ss_dssp ---------TT----------------EEEEEEE--------------------------C-SSCBCCCEECTTSEEEEE
T ss_pred ---------CC----------------eEEEEEE--------------------------c-CCCccceEEcCCCCEEEE
Confidence 11 1111111 0 112346778899986665
Q ss_pred EecC----------CcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccc
Q 014302 254 AKFD----------GTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPV 321 (427)
Q Consensus 254 ~~~d----------g~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 321 (427)
+..+ +.|.++|..+.+..... ........++|+|+++.|+++.. .++.++....... .....
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~-~~~~~-- 262 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVP-VRPFL-- 262 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCC-SSCSB--
T ss_pred ECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCcee-eeeee--
Confidence 5544 78999999887764332 22347889999999999887543 5666666543210 00000
Q ss_pred ccccceeeccCCceeEEEECCCCCEEEEEEec--CCCcceeEEEEEEeccCceEEEeeee
Q 014302 322 DLPDIVSLTGSQGIEKIAWDASGERLAVSYKG--GDDIYKGLIAIYDARRTPLISLSLIG 379 (427)
Q Consensus 322 ~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~--~~d~~~g~i~vwd~~~~~~~~~~~~~ 379 (427)
. ........++++|++..|.++... ..+ +.|.+||.. ++++...+.|
T Consensus 263 --~-----~~~~~p~gi~vdp~~g~lyva~~~~y~~~---~~V~v~d~~-g~~~~~i~~G 311 (328)
T 3dsm_A 263 --E-----FRDTKYYGLTVNPNNGEVYVADAIDYQQQ---GIVYRYSPQ-GKLIDEFYVG 311 (328)
T ss_dssp --C-----CCSSCEEEEEECTTTCCEEEEECTTSSSE---EEEEEECTT-CCEEEEEEEE
T ss_pred --c-----CCCCceEEEEEcCCCCeEEEEcccccccC---CEEEEECCC-CCEEEEEEec
Confidence 0 013467899999966666554200 222 789999998 6665444333
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=4.6e-08 Score=88.51 Aligned_cols=229 Identities=11% Similarity=0.129 Sum_probs=134.2
Q ss_pred ceeeeEEcCCCC-EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKH-IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~-~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
......|+|+|+ ++++...++.|..|+.. + .. .....+...+..++|+++| +++++.. .+.|.+|+.+ +.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g--~~-~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~--g~- 117 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G--TV-DVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDAD--GQ- 117 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETT-S--CE-EEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEECTT--SC-
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCC-C--CE-EEEeCCCCccceeeECCCC-CEEEEECCCCEEEEECCC--CC-
Confidence 456889999998 56667778999999863 3 12 2222345578999999999 5666554 3778888764 10
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEE----E
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFA----A 254 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~----~ 254 (427)
...+ ... . .+ .....+..++++|+|+..++ |
T Consensus 118 ---------------------~~~~---~~~---------~--~~----------~~~~~~~~i~~d~dG~l~~td~~~g 152 (305)
T 3dr2_A 118 ---------------------AHLL---VGR---------Y--AG----------KRLNSPNDLIVARDGAIWFTDPPFG 152 (305)
T ss_dssp ---------------------EEEE---ECE---------E--TT----------EECSCCCCEEECTTSCEEEECCSGG
T ss_pred ---------------------EEEE---Eec---------c--CC----------CccCCCCCEEECCCCCEEEeCcCCC
Confidence 0000 000 0 00 01123556778888876665 2
Q ss_pred ec-------------CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCC-----ceeeeeeeCCCCCCccc
Q 014302 255 KF-------------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGS-----LTLGSIHFASKPPSLDA 316 (427)
Q Consensus 255 ~~-------------dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~-----~~i~~~~~~~~~~~~~~ 316 (427)
.. .+.|..||..+++..... .......++|+|||+.|+++.... ..|+.+++.... +..
T Consensus 153 ~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~ 229 (305)
T 3dr2_A 153 LRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA--LHD 229 (305)
T ss_dssp GSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE--EEE
T ss_pred ccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC--ccC
Confidence 21 245777776666554333 344567899999999888776542 467777765431 111
Q ss_pred cccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEec
Q 014302 317 HLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFH 396 (427)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 396 (427)
..... ....+.+..++++++|++.++ . .+ .|.+|+.. +..+. .+..+. .+.+++|.
T Consensus 230 ~~~~~-------~~~~~~pdgi~~d~~G~lwv~---~-~~----gv~~~~~~-g~~~~-----~~~~~~---~~~~~~f~ 285 (305)
T 3dr2_A 230 RRHFA-------SVPDGLPDGFCVDRGGWLWSS---S-GT----GVCVFDSD-GQLLG-----HIPTPG---TASNCTFD 285 (305)
T ss_dssp EEEEE-------CCSSSCCCSEEECTTSCEEEC---C-SS----EEEEECTT-SCEEE-----EEECSS---CCCEEEEC
T ss_pred CeEEE-------ECCCCCCCeEEECCCCCEEEe---c-CC----cEEEECCC-CCEEE-----EEECCC---ceeEEEEe
Confidence 00000 001234578999999995544 2 22 29999985 44332 222222 25578887
Q ss_pred cCCCCCceeEEEeeCc
Q 014302 397 DKFKQGPLLSVCWSSG 412 (427)
Q Consensus 397 ~~~~~g~~l~v~~~~g 412 (427)
++ +..|.++.+++
T Consensus 286 ~d---~~~L~it~~~~ 298 (305)
T 3dr2_A 286 QA---QQRLFITGGPC 298 (305)
T ss_dssp TT---SCEEEEEETTE
T ss_pred CC---CCEEEEEcCCe
Confidence 54 56677776654
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.05 E-value=3e-07 Score=82.37 Aligned_cols=235 Identities=13% Similarity=0.065 Sum_probs=144.2
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCccee-eccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCC
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACI-LTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 177 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~ 177 (427)
..+.++++.++|++.++...++.|.+|+.. . .... ........+.++++.+++ .++++.. .+.|..|+.+ +
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~--~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~--g- 92 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-G--RIKEFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK--G- 92 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-S--CEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT--S-
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-C--ceEEEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEECCC--C-
Confidence 367899999999977777678999998876 3 2222 122234578999999998 5555544 5778888764 0
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD 257 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 257 (427)
..... . . + .....+..++++++|+.+++...+
T Consensus 93 ---------------------~~~~~---~-----------~-~------------~~~~~~~~i~~~~~g~l~v~~~~~ 124 (300)
T 2qc5_A 93 ---------------------GFTEY---P-----------L-P------------QPDSGPYGITEGLNGDIWFTQLNG 124 (300)
T ss_dssp ---------------------CEEEE---E-----------C-S------------STTCCEEEEEECSTTCEEEEETTT
T ss_pred ---------------------CeEEe---c-----------C-C------------CCCCCCccceECCCCCEEEEccCC
Confidence 00000 0 0 0 012346788899999877776667
Q ss_pred CcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCce
Q 014302 258 GTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGI 335 (427)
Q Consensus 258 g~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 335 (427)
+.|..||.. ++...+. .....+..+++.++|+..+ +....+.+..++.... +.. ... ......+
T Consensus 125 ~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~i~~~~~~g~---~~~----~~~-----~~~~~~~ 190 (300)
T 2qc5_A 125 DRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWF-TENQNNSIGRITNTGK---LEE----YPL-----PTNAAAP 190 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEE-EETTTTEEEEECTTCC---EEE----EEC-----SSTTCCE
T ss_pred CeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEE-EecCCCeEEEECCCCc---EEE----eeC-----CCCCCCc
Confidence 889999886 4443222 2456788999999999544 4454556666655211 110 000 0112367
Q ss_pred eEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEE
Q 014302 336 EKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCC 415 (427)
Q Consensus 336 ~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~ 415 (427)
..++++++|...++ .... +.|.+|+. ++...... .+.....+.++++.++ |.++...+.++.|.
T Consensus 191 ~~i~~d~~g~l~v~---~~~~---~~i~~~~~-~g~~~~~~------~~~~~~~~~~i~~d~~---g~l~v~~~~~~~i~ 254 (300)
T 2qc5_A 191 VGITSGNDGALWFV---EIMG---NKIGRITT-TGEISEYD------IPTPNARPHAITAGKN---SEIWFTEWGANQIG 254 (300)
T ss_dssp EEEEECTTSSEEEE---ETTT---TEEEEECT-TCCEEEEE------CSSTTCCEEEEEECST---TCEEEEETTTTEEE
T ss_pred ceEEECCCCCEEEE---ccCC---CEEEEEcC-CCcEEEEE------CCCCCCCceEEEECCC---CCEEEeccCCCeEE
Confidence 89999999987766 3222 45999988 44443221 1112234678888765 55555555567887
Q ss_pred EEec
Q 014302 416 TYPL 419 (427)
Q Consensus 416 ~~~~ 419 (427)
.|+.
T Consensus 255 ~~~~ 258 (300)
T 2qc5_A 255 RITN 258 (300)
T ss_dssp EECT
T ss_pred EECC
Confidence 7763
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.03 E-value=3.4e-07 Score=85.18 Aligned_cols=244 Identities=14% Similarity=-0.000 Sum_probs=134.4
Q ss_pred eeEEcCCCCEEEEEe----------CCCeEEEEEccCCCCcceeecc--C---CcCCeeEEEEccCCCceEEEec--CCe
Q 014302 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSGKDACILTS--D---SQRDVKVLEWRPNGGRSLSVGC--KGG 166 (427)
Q Consensus 104 ~l~~sp~g~~lat~~----------~d~~v~vwd~~~~~~~~~~~~~--~---~~~~v~~l~~sp~~~~~la~g~--~~~ 166 (427)
.+++||||++|+++. .++.|.+||..+.......... . +...-..++|+|||+.++++.. .+.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 789999999988875 3678999998765111111111 0 0123457899999965555543 367
Q ss_pred EEEEeccCCCCccccccCcccccccccCCCCcceeEeeh-hcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEc
Q 014302 167 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDF-LRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWS 245 (427)
Q Consensus 167 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~s 245 (427)
|.++| . ++ +.+.. +... .++.+.
T Consensus 150 v~viD-~---------t~----------------~~~~~~i~~~------------------------------~~~~~~ 173 (373)
T 2mad_H 150 VGLVV-Q---------GG----------------SSDDQLLSSP------------------------------TCYHIH 173 (373)
T ss_pred EEEEE-C---------CC----------------CEEeEEcCCC------------------------------ceEEEE
Confidence 88988 7 11 11111 1100 013344
Q ss_pred cCCCE-EEEEecCCcEEEEEcCCCCccccc------cCCCC-eeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccc
Q 014302 246 PTGDY-FFAAKFDGTFYLWETNTWTSEPWS------STSGF-VTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 246 p~g~~-l~~~~~dg~v~iwd~~~~~~~~~~------~~~~~-v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 317 (427)
|+++. +++.+.||.+.++|. +++..... ..... .....+.+++..+++.+ ..+.+..+++.........
T Consensus 174 ~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~- 250 (373)
T 2mad_H 174 PGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKA- 250 (373)
T ss_pred eCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEee-
Confidence 55543 335566777888887 55433111 11111 23355677776665554 3447777777543211100
Q ss_pred ccccccccce---eeccCCceeEEEECCCCCEEEEEEecCCC----cceeEEEEEEeccCceEEEeeeeeeeCCCCCCCc
Q 014302 318 LLPVDLPDIV---SLTGSQGIEKIAWDASGERLAVSYKGGDD----IYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKP 390 (427)
Q Consensus 318 ~~~~~~~~~~---~~~~~~~i~~v~~sp~g~~La~~~~~~~d----~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 390 (427)
.+++.... ..........++++||++.|.+......+ ...+.|.++|+.+++.+...+.+. .+
T Consensus 251 --~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~--------~p 320 (373)
T 2mad_H 251 --PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH--------DV 320 (373)
T ss_pred --eeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC--------Cc
Confidence 01000000 00011234558899999988875321100 011469999999988764333221 36
Q ss_pred eeEEeccCCCCCc-eeEEEe-eCceEEEEec
Q 014302 391 VAFSFHDKFKQGP-LLSVCW-SSGFCCTYPL 419 (427)
Q Consensus 391 ~~~~f~~~~~~g~-~l~v~~-~~g~i~~~~~ 419 (427)
..++|.|+ |. +|-++. .++.|.+|++
T Consensus 321 ~~i~~s~D---g~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 321 DAISVAQD---GGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred CeEEECCC---CCeEEEEEcCCCCeEEEEEC
Confidence 68999886 55 565655 6899999985
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.97 E-value=2.1e-07 Score=82.86 Aligned_cols=187 Identities=11% Similarity=0.044 Sum_probs=112.3
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCc-CCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccc
Q 014302 110 HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQ-RDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASF 188 (427)
Q Consensus 110 ~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~-~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~ 188 (427)
.+++|++++.|+.|.+||.+++ +..-....+. ..+.+++++|+| ++|+ +.++.|..||.+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG--~~~w~~~~~~~~~~~~~~~~pdG-~ilv-s~~~~V~~~d~~--------------- 64 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK--EIVWEYPLEKGWECNSVAATKAG-EILF-SYSKGAKMITRD--------------- 64 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT--EEEEEEECCTTCCCCEEEECTTS-CEEE-ECBSEEEEECTT---------------
T ss_pred CCcEEEeeCCCCEEEEEECCCC--eEEEEeCCCccCCCcCeEECCCC-CEEE-eCCCCEEEECCC---------------
Confidence 4678999999999999998776 3332222333 468899999999 6777 446778888764
Q ss_pred cccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec-CCcEEEEEcCC
Q 014302 189 LGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF-DGTFYLWETNT 267 (427)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-dg~v~iwd~~~ 267 (427)
+. .+..+..+ ....+.++.+.++|+.+++.+. ++.|..+|. .
T Consensus 65 --------G~---~~W~~~~~-------------------------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~ 107 (276)
T 3no2_A 65 --------GR---ELWNIAAP-------------------------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-K 107 (276)
T ss_dssp --------SC---EEEEEECC-------------------------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-T
T ss_pred --------CC---EEEEEcCC-------------------------CCccccccEECCCCCEEEEecCCCCEEEEEeC-C
Confidence 10 11111111 0113456667777777776655 555655554 2
Q ss_pred CCc-cccc------cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEE
Q 014302 268 WTS-EPWS------STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAW 340 (427)
Q Consensus 268 ~~~-~~~~------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 340 (427)
++. ..+. .+......+++.++|+++++. ..++.+..++...+ . ...+.....+.++..
T Consensus 108 Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~-~~~~~v~~~d~~G~-~-------------~w~~~~~~~~~~~~~ 172 (276)
T 3no2_A 108 GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL-FATSEVREIAPNGQ-L-------------LNSVKLSGTPFSSAF 172 (276)
T ss_dssp SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE-TTTTEEEEECTTSC-E-------------EEEEECSSCCCEEEE
T ss_pred CCEEEEEeccCCCCcccccccCceECCCCCEEEEe-cCCCEEEEECCCCC-E-------------EEEEECCCCccceeE
Confidence 322 1111 111234566789999998765 44556666665422 1 111111234567788
Q ss_pred CCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 341 DASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 341 sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.++|+.|++ +..+ +.|..+|..+++.+
T Consensus 173 ~~~g~~~v~---~~~~---~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 173 LDNGDCLVA---CGDA---HCFVQLNLESNRIV 199 (276)
T ss_dssp CTTSCEEEE---CBTT---SEEEEECTTTCCEE
T ss_pred cCCCCEEEE---eCCC---CeEEEEeCcCCcEE
Confidence 899999887 4443 56999999888765
No 206
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.94 E-value=8.4e-08 Score=89.02 Aligned_cols=220 Identities=12% Similarity=0.109 Sum_probs=120.5
Q ss_pred ceeeeEEcCCCCEEEEEeC--CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCc-eEEEecCCeEEEEeccCCCC
Q 014302 101 DLQGVSWHQHKHIVAFISG--STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGR-SLSVGCKGGICIWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~-~la~g~~~~i~iw~~~~~~~ 177 (427)
....++|+|||++|+++.. +++|.+||+... +.......+. ....+.+.|++.. +++.+.++.+.+|+.+..+.
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~--~~~~~~i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~ 185 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG--DYVEDVTAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK 185 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTT--EEEEEEGGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCC--cEEEEEecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc
Confidence 4678999999999988864 689999999876 2322201111 2233567777644 44445668888887753232
Q ss_pred cccc-------ccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEe----------ccCCeE
Q 014302 178 AASV-------RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRR----------GFGGLS 240 (427)
Q Consensus 178 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~----------~~~~v~ 240 (427)
.... ..+..........++. .+... .. ...+..+.+..+...+.. .+.. ...+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~----~~-~~~v~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 186 VASQSRSKQMFSVKDDPIFIAPALDKD-KAHFV----SY-YGNVYSADFSGDEVKVDG--PWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EEEEEECCCCSCTTTSCBCSCCEECSS-EEEEE----BT-TSEEEEEECSSSSCEEEE--EEESCCHHHHHTTCEECCSS
T ss_pred EeeeccccceEcCCCCceEEEecccCC-EEEEE----eC-CCeEEEEEecCCCceecc--cccccCccccccccccCCee
Confidence 1100 0000000000001110 00000 01 223444444433211100 0000 011222
Q ss_pred EEEEccCCCEEEEEec-----------CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 241 ILKWSPTGDYFFAAKF-----------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~-----------dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
.++++|+++.++++.. .+.|.+||+.+.+......... ..+++|+|||++|+++. . +.+.+|+..+
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~D~~t 334 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVYDISQ 334 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC-S-SCEEEEECSS
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC-C-CeEEEEECCC
Confidence 4789999998886543 3479999999988754443333 99999999999888665 4 6788887655
Q ss_pred CCCCccccccccccccceee-ccCCceeEEEECCCCC
Q 014302 310 KPPSLDAHLLPVDLPDIVSL-TGSQGIEKIAWDASGE 345 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~sp~g~ 345 (427)
...+. ...+ ..+.....++++|+|+
T Consensus 335 ~~l~~-----------~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 335 PEPKL-----------LRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSCEE-----------EEEETTSCSSEEEEEECCCSC
T ss_pred Cccee-----------eEEeccCCCCcEEEEecCCCC
Confidence 31111 1121 2344778999999986
No 207
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=8e-08 Score=88.51 Aligned_cols=249 Identities=12% Similarity=0.049 Sum_probs=140.1
Q ss_pred ceeeeEEcCCCCEEEEEe--CCCeEEEEEccCCCCccee------eccCCcCCeeEEEEccCCCceEEEec------CCe
Q 014302 101 DLQGVSWHQHKHIVAFIS--GSTQVIVRDYEDSGKDACI------LTSDSQRDVKVLEWRPNGGRSLSVGC------KGG 166 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~--~d~~v~vwd~~~~~~~~~~------~~~~~~~~v~~l~~sp~~~~~la~g~------~~~ 166 (427)
.+..++++|+|+.+++.. .++.++||.++.+ .... ....+...+..+++.+++ +++++.. ...
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g--~~~~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQD--GLIPFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPK 94 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETT--EEEESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCCE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCC--CeecCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCCe
Confidence 468899999999888763 2343667777632 1110 111345679999999998 5655442 467
Q ss_pred EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc
Q 014302 167 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP 246 (427)
Q Consensus 167 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp 246 (427)
|.+||+. ++ ..+..+. +... ...+......+++++
T Consensus 95 i~~~d~~---------tg----------------~~~~~~~-----------~~~~---------~~~~~~~~~~v~vd~ 129 (343)
T 2qe8_A 95 LVAWDTL---------NN----------------QLSRVIY-----------LPPP---------ITLSNSFVNDLAVDL 129 (343)
T ss_dssp EEEEETT---------TT----------------EEEEEEE-----------CCTT---------TSCTTCCCCEEEEET
T ss_pred EEEEECC---------CC----------------eEEEEEE-----------CChh---------hcccccccceEEEec
Confidence 8889876 11 1111111 1000 001123456788888
Q ss_pred CCCEEE-EEe---cCCcEEEEEcCCCCccccc-c-----------------------------CCCCeeEEEECCCCCEE
Q 014302 247 TGDYFF-AAK---FDGTFYLWETNTWTSEPWS-S-----------------------------TSGFVTGATWDPEGRMI 292 (427)
Q Consensus 247 ~g~~l~-~~~---~dg~v~iwd~~~~~~~~~~-~-----------------------------~~~~v~~v~~spdg~~l 292 (427)
++..++ +.. .++.|.+||+.+++...+. . ....+..++|+|||+.|
T Consensus 130 ~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 130 IHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWL 209 (343)
T ss_dssp TTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEE
T ss_pred CCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEE
Confidence 765655 444 5788999998766532211 0 01235789999999999
Q ss_pred EEEEcCCceeeeeeeCCC-CCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 293 LLAFAGSLTLGSIHFASK-PPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 293 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
+++......++.++.... ...+..... ..........+....++++++|..+++ .... +.|.+||.+++.
T Consensus 210 y~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~g~~g~pdgia~d~~G~l~va---~~~~---~~V~~~d~~~G~ 280 (343)
T 2qe8_A 210 YLSPMHSTSMYRIKSADLSNLQLTDAEL---GSKIERYSEKPICDGISIDKDHNIYVG---DLAH---SAIGVITSADRA 280 (343)
T ss_dssp EEEESSCSEEEEEEHHHHTCTTCCHHHH---HTTCEEEEECCSCSCEEECTTCCEEEE---EGGG---TEEEEEETTTTE
T ss_pred EEEeCCCCeEEEEEHHHhcCCCCChhhh---hcceEecccCCCCceEEECCCCCEEEE---ccCC---CeEEEEECCCCC
Confidence 887766666666654211 011100000 000011112235678999999987776 3333 569999985554
Q ss_pred eEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEE
Q 014302 372 LISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCC 415 (427)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~ 415 (427)
...+ +..+ ....|..++|.++ |.++.+....+++.
T Consensus 281 ~~~~-----~~~~-~~~~p~~va~~~~---g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 281 YKLL-----VTDE-KLSWTDSFNFGSD---GYLYFDCNQLHHSA 315 (343)
T ss_dssp EEEE-----EECG-GGSCEEEEEECTT---SCEEEEECCGGGSG
T ss_pred EEEE-----EECC-ceecCCeeEECCC---CcEEEEeCcccccc
Confidence 3222 1112 1223668888874 66666665554443
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.90 E-value=1.4e-06 Score=80.39 Aligned_cols=273 Identities=13% Similarity=0.057 Sum_probs=145.0
Q ss_pred EEcCCCCEEEEEeC-----CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec----------CCeEEEE
Q 014302 106 SWHQHKHIVAFISG-----STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC----------KGGICIW 170 (427)
Q Consensus 106 ~~sp~g~~lat~~~-----d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~----------~~~i~iw 170 (427)
...|++.++.+... ++.|.+.|..+. +.......-..+ .++++|||+.++++.. ++.|.+|
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCC--eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 34789998877755 678999887766 332222222223 4999999966655542 3679999
Q ss_pred eccCCCCccccccCcccccccccCCCCcceeEeehhcccC------CCceeeeEeCCCCCCcccC---------------
Q 014302 171 APSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQN------GEQITALSWGPDGRFPGLG--------------- 229 (427)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~--------------- 229 (427)
|.. +. ..+..+.-.. ......++++|||+++...
T Consensus 115 D~~---------t~----------------~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 115 DPV---------TL----------------LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp CTT---------TC----------------CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred ECC---------CC----------------eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC
Confidence 987 11 1222121110 1234567888888853211
Q ss_pred -ceEEec-cCCeEEEEEccCCCEEEEEecCCcEEEEEcCC-CCcc----ccc-cCCCCe-eEEEE-CCCCCEEEEEEcCC
Q 014302 230 -TPIRRG-FGGLSILKWSPTGDYFFAAKFDGTFYLWETNT-WTSE----PWS-STSGFV-TGATW-DPEGRMILLAFAGS 299 (427)
Q Consensus 230 -~~~~~~-~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~-~~~~----~~~-~~~~~v-~~v~~-spdg~~l~~~~~~~ 299 (427)
..+..- ..+. ...+....+.+++.+.||.+.+.++.. ++.. ... .....+ ....| .++|++++ .+. +
T Consensus 170 ~~vv~tI~v~g~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~-~ 246 (386)
T 3sjl_D 170 KAFKRMLDVPDC-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTY-T 246 (386)
T ss_dssp TEEEEEEECCSE-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBT-T
T ss_pred CcEEEEEECCCc-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeC-C
Confidence 111110 0111 112222345566667788877777765 3321 011 111222 12455 36776554 333 4
Q ss_pred ceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCC----CcceeEEEEEEeccCceEEE
Q 014302 300 LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGD----DIYKGLIAIYDARRTPLISL 375 (427)
Q Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~----d~~~g~i~vwd~~~~~~~~~ 375 (427)
+.++.+++......+..............-...+....++++++++.|.+...... ......|.++|+++++++..
T Consensus 247 g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~ 326 (386)
T 3sjl_D 247 GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK 326 (386)
T ss_dssp SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE
Confidence 57888887654221110000000000000001124456888999999998653210 00125699999999998866
Q ss_pred eeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 376 SLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
.+.|- .+..++|.++- ...|++..+.++.|.+|+.
T Consensus 327 i~vg~--------~~~~lavs~D~-~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 327 FEMGH--------EIDSINVSQDE-KPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp EEEEE--------EECEEEECSSS-SCEEEEEETTTTEEEEEET
T ss_pred EECCC--------CcceEEECCCC-CeEEEEEcCCCCeEEEEEC
Confidence 66553 25578888762 1134555677999999985
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.90 E-value=1.7e-07 Score=86.56 Aligned_cols=226 Identities=14% Similarity=0.054 Sum_probs=127.8
Q ss_pred eeEEcCCCCEEEEEe----------CCCeEEEEEccCCCCcceeec-cC------CcCCeeEEEEccCCCceEEEec--C
Q 014302 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSGKDACILT-SD------SQRDVKVLEWRPNGGRSLSVGC--K 164 (427)
Q Consensus 104 ~l~~sp~g~~lat~~----------~d~~v~vwd~~~~~~~~~~~~-~~------~~~~v~~l~~sp~~~~~la~g~--~ 164 (427)
.++++|||++|.++. .++.|.+||..+. +..... .+ ....-..++|+|||++++++.. .
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 389999999887764 3678999998877 222211 11 1124567999999966665543 4
Q ss_pred CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCC---ce---eeeEeCCCCCCcc----c-CceEE
Q 014302 165 GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGE---QI---TALSWGPDGRFPG----L-GTPIR 233 (427)
Q Consensus 165 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v---~~~~~spdg~~l~----~-~~~~~ 233 (427)
+.|.++|+. ++ +.+..+...... +. .-++.++||+++. . +....
T Consensus 160 ~~VsVID~~---------t~----------------~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 160 PAVGVVDLE---------GK----------------AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp CEEEEEETT---------TT----------------EEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred CeEEEEECC---------CC----------------cEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEE
Confidence 789999987 11 111111110000 00 0124455555421 1 11111
Q ss_pred ---ecc----CCeE-EEEEc-cCCCEEEEEecCCcEEEEEcCCCCcc---ccc----------cCCCCeeEEEECCCCCE
Q 014302 234 ---RGF----GGLS-ILKWS-PTGDYFFAAKFDGTFYLWETNTWTSE---PWS----------STSGFVTGATWDPEGRM 291 (427)
Q Consensus 234 ---~~~----~~v~-~~~~s-p~g~~l~~~~~dg~v~iwd~~~~~~~---~~~----------~~~~~v~~v~~spdg~~ 291 (427)
.+. ..+. ...|. ++|++++ .+.+|.|++.|+.+.... .+. -.......++++++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ 293 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR 293 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTE
T ss_pred eecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCe
Confidence 011 1111 23554 6776555 455899999999766431 111 01123345777899998
Q ss_pred EEEEEcC---------CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeE
Q 014302 292 ILLAFAG---------SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGL 361 (427)
Q Consensus 292 l~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~ 361 (427)
++.+..+ ...+.++++...+. ...+..+..+.+|++++|++ +|.++..++ +.
T Consensus 294 lyV~~~~~~~~~hk~~~~~V~viD~~t~kv-------------~~~i~vg~~~~~lavs~D~~~~ly~tn~~~-----~~ 355 (386)
T 3sjl_D 294 IYLLVDQRDEWRHKTASRFVVVLDAKTGER-------------LAKFEMGHEIDSINVSQDEKPLLYALSTGD-----KT 355 (386)
T ss_dssp EEEEEEECCTTCTTSCEEEEEEEETTTCCE-------------EEEEEEEEEECEEEECSSSSCEEEEEETTT-----TE
T ss_pred EEEEeccccccccCCCCCEEEEEECCCCeE-------------EEEEECCCCcceEEECCCCCeEEEEEcCCC-----Ce
Confidence 8876532 13566666655421 12222334788999999997 666643223 56
Q ss_pred EEEEEeccCceEEE
Q 014302 362 IAIYDARRTPLISL 375 (427)
Q Consensus 362 i~vwd~~~~~~~~~ 375 (427)
|.++|..+++.+..
T Consensus 356 VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 356 LYIHDAESGEELRS 369 (386)
T ss_dssp EEEEETTTCCEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 99999999887633
No 210
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.89 E-value=2.6e-07 Score=86.05 Aligned_cols=160 Identities=14% Similarity=0.158 Sum_probs=94.9
Q ss_pred eEEEEEccCCCEEEEEe-------------------cCCcEEEEEcCCCCccccccCC---CCeeEEEE--CCCCCEEEE
Q 014302 239 LSILKWSPTGDYFFAAK-------------------FDGTFYLWETNTWTSEPWSSTS---GFVTGATW--DPEGRMILL 294 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~-------------------~dg~v~iwd~~~~~~~~~~~~~---~~v~~v~~--spdg~~l~~ 294 (427)
-+.+.|+|+++.++++. .+.+|.+||+.+++........ .....+.| +|+|+++++
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV 269 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFI 269 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEE
Confidence 34577899999888774 3688999999886543333221 23344544 999999998
Q ss_pred EEc-----CCceeeeeeeCCCCCCccccccccccccce---ee-------c-cCCceeEEEECCCCCEEEEEEecCCCcc
Q 014302 295 AFA-----GSLTLGSIHFASKPPSLDAHLLPVDLPDIV---SL-------T-GSQGIEKIAWDASGERLAVSYKGGDDIY 358 (427)
Q Consensus 295 ~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~-~~~~i~~v~~sp~g~~La~~~~~~~d~~ 358 (427)
++. .++++..+...+ ..+.... .++++... .+ . ....+..+.+||||++|.++..+.
T Consensus 270 ~~e~~~~~Lss~V~v~~~d~--g~~~~~~-vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~---- 342 (462)
T 2ece_A 270 NMVVSLKDLSSSIWLWFYED--GKWNAEK-VIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI---- 342 (462)
T ss_dssp EEEEETTTCCEEEEEEEEET--TEEEEEE-EEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT----
T ss_pred EEeeeccCCCceEEEEEecC--CceeEEE-EEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC----
Confidence 887 777777666543 1111111 01111110 00 0 024678999999999999976555
Q ss_pred eeEEEEEEeccC---ceEEEeeeeee-------eCCCCCCCceeEEeccCCCCCceeEEEe
Q 014302 359 KGLIAIYDARRT---PLISLSLIGFI-------RGPGDNPKPVAFSFHDKFKQGPLLSVCW 409 (427)
Q Consensus 359 ~g~i~vwd~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~f~~~~~~g~~l~v~~ 409 (427)
+.|.+||+... +++...+.|-. .+......|..+++.|+ |..|-|+.
T Consensus 343 -d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD---Gk~LyVaN 399 (462)
T 2ece_A 343 -GEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD---GRRVYVTN 399 (462)
T ss_dssp -TEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT---SSEEEEEC
T ss_pred -CEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC---CCEEEEEc
Confidence 45999998632 33333333310 01111123667888775 66666665
No 211
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.88 E-value=2.7e-06 Score=75.96 Aligned_cols=220 Identities=9% Similarity=-0.004 Sum_probs=129.1
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNA 178 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~ 178 (427)
..+.+++++++|.++++...++.|..|+.+.. ............+.++++.|++ .++++. ..+.+.+|+.. +..
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~~--g~~ 131 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKKGI--IKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITDD--GKI 131 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSC--EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECTT--CCE
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCCCc--EEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECCC--CCE
Confidence 35889999999998877766888988886522 1111112244578999999998 565555 45788888763 111
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc-------------cCceE----EeccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG-------------LGTPI----RRGFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~-------------~~~~~----~~~~~~v~~ 241 (427)
... . ... ....+..+++.++|++.. .+... ......+..
T Consensus 132 ~~~----------------------~-~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~ 187 (299)
T 2z2n_A 132 REY----------------------E-LPN-KGSYPSFITLGSDNALWFTENQNNAIGRITESGDITEFKIPTPASGPVG 187 (299)
T ss_dssp EEE----------------------E-CSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEE
T ss_pred EEe----------------------c-CCC-CCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCccee
Confidence 000 0 000 122344455555444311 01111 112345778
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccc
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
++++++|+..++...++.|.+||. +++...+. .....+.+++++++|+.++ +....+.+..++.. . .+..
T Consensus 188 i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~~~~~i~~~d~~-g--~~~~--- 259 (299)
T 2z2n_A 188 ITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWF-TEWGANKIGRLTSN-N--IIEE--- 259 (299)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE-EETTTTEEEEEETT-T--EEEE---
T ss_pred EEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEE-eccCCceEEEECCC-C--ceEE---
Confidence 999999986666666889999998 55543322 3456788999999998554 44444567776652 1 1110
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
... ......+.++++ ++|+.+++. .. +.|..++.++.
T Consensus 260 -~~~-----~~~~~~~~~i~~-~~g~l~v~~---~~----~~l~~~~~~~~ 296 (299)
T 2z2n_A 260 -YPI-----QIKSAEPHGICF-DGETIWFAM---EC----DKIGKLTLIKD 296 (299)
T ss_dssp -EEC-----SSSSCCEEEEEE-CSSCEEEEE---TT----TEEEEEEEC--
T ss_pred -EeC-----CCCCCccceEEe-cCCCEEEEe---cC----CcEEEEEcCcc
Confidence 000 012236889999 999877663 22 23777777654
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.87 E-value=1.2e-06 Score=82.20 Aligned_cols=270 Identities=10% Similarity=0.042 Sum_probs=139.7
Q ss_pred CCCCEEEEEeCC-----CeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec----------CCeEEEEecc
Q 014302 109 QHKHIVAFISGS-----TQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC----------KGGICIWAPS 173 (427)
Q Consensus 109 p~g~~lat~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~----------~~~i~iw~~~ 173 (427)
|++.++.+.... +.|.+.|..+. +......--..+ .++++||++.++++.. ++.|.++|..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 566666655442 69999998776 232222211223 7999999966665542 3678899886
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhccc------CCCceeeeEeCCCCCCcccC-----c---eEEeccCC-
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQ------NGEQITALSWGPDGRFPGLG-----T---PIRRGFGG- 238 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~spdg~~l~~~-----~---~~~~~~~~- 238 (427)
++ ..+..+... .......+.++|||+++... . .+......
T Consensus 158 ---------t~----------------~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 158 ---------TF----------------LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp ---------TC----------------CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred ---------CC----------------cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 11 111111110 01223467777777753311 0 01000000
Q ss_pred eE------EEEEccCC-CEEEEEecCCcEEEEEcCCCCcc-----ccccCCCC-eeEEEECCCCCEEEEEEcCCceeeee
Q 014302 239 LS------ILKWSPTG-DYFFAAKFDGTFYLWETNTWTSE-----PWSSTSGF-VTGATWDPEGRMILLAFAGSLTLGSI 305 (427)
Q Consensus 239 v~------~~~~sp~g-~~l~~~~~dg~v~iwd~~~~~~~-----~~~~~~~~-v~~v~~spdg~~l~~~~~~~~~i~~~ 305 (427)
+. +....|++ +.+++.+.||.+.+.+..+++.. .+...... ...+.|++++..+++... .+.++++
T Consensus 213 v~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~Vi 291 (426)
T 3c75_H 213 DRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQA 291 (426)
T ss_dssp EEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEE
T ss_pred EEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEE
Confidence 00 11233443 33345556677666666433322 11111111 124567888887776644 4577777
Q ss_pred eeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC----cceeEEEEEEeccCceEEEeeeeee
Q 014302 306 HFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD----IYKGLIAIYDARRTPLISLSLIGFI 381 (427)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d----~~~g~i~vwd~~~~~~~~~~~~~~~ 381 (427)
++......+..............-........++++|++++|.++.....+ ...+.|.++|+.+.+.+...+.|-
T Consensus 292 D~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~- 370 (426)
T 3c75_H 292 DLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH- 370 (426)
T ss_dssp EECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-
T ss_pred eccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-
Confidence 775432111000000000000000001123457899999988885432110 012579999999999876655543
Q ss_pred eCCCCCCCceeEEeccCCCCCc-eeEEEe-eCceEEEEec
Q 014302 382 RGPGDNPKPVAFSFHDKFKQGP-LLSVCW-SSGFCCTYPL 419 (427)
Q Consensus 382 ~~~~~~~~~~~~~f~~~~~~g~-~l~v~~-~~g~i~~~~~ 419 (427)
.+..++|.|+ |. +|-+.+ .++.|.+|+.
T Consensus 371 -------~P~gia~spD---g~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 371 -------EIDSINVSQD---AEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp -------EECEEEECCS---SSCEEEEEETTTTEEEEEET
T ss_pred -------CcCeEEEccC---CCEEEEEEcCCCCeEEEEEC
Confidence 2668999886 55 555555 6999999985
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.86 E-value=3.3e-06 Score=75.42 Aligned_cols=232 Identities=11% Similarity=0.032 Sum_probs=137.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~ 179 (427)
.+.+++++++|+++++...++.|.+||.. +. ............+.++++.+++ .++++.. .+.|..++.+ +
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~-~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~--g--- 134 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GG-FTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD--G--- 134 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT--S---
T ss_pred cceeEEECCCCCEEEEecCCCeEEEECCC-CC-eEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC--C---
Confidence 57899999999977776667889888876 31 1212222234578999999998 5555554 5778777754 0
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCc
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGT 259 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~ 259 (427)
...... + + .....+..++++++|+..++...++.
T Consensus 135 -------------------~~~~~~-~--------------~------------~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 135 -------------------TIYEYD-L--------------P------------NKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp -------------------CEEEEE-C--------------S------------STTCCEEEEEECTTSSEEEEETTTTE
T ss_pred -------------------CEEEcc-C--------------C------------CCCCCceeEEECCCCCEEEEecCCCe
Confidence 000000 0 0 01235678889999985556655788
Q ss_pred EEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeE
Q 014302 260 FYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEK 337 (427)
Q Consensus 260 v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 337 (427)
|..||. .++...+. .....+..+++.++|+..+ +....+.+..++.... +..... ......+.+
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~i~~~~~~g~---~~~~~~---------~~~~~~~~~ 234 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWF-VEIMGNKIGRITTTGE---ISEYDI---------PTPNARPHA 234 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEE-EETTTTEEEEECTTCC---EEEEEC---------SSTTCCEEE
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEE-EccCCCEEEEEcCCCc---EEEEEC---------CCCCCCceE
Confidence 999987 44433222 3345688999999997665 4444446666655211 110000 012236789
Q ss_pred EEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEE
Q 014302 338 IAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTY 417 (427)
Q Consensus 338 v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~ 417 (427)
++++++|+..++ ...+ +.|..|+. ++...... .+.....+.++++.++ |.++...+ + .|..|
T Consensus 235 i~~d~~g~l~v~---~~~~---~~i~~~~~-~g~~~~~~------~~~~~~~~~~i~~~~~---g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 235 ITAGKNSEIWFT---EWGA---NQIGRITN-DNTIQEYQ------LQTENAEPHGITFGKD---GSVWFALK-C-KIGKL 296 (300)
T ss_dssp EEECSTTCEEEE---ETTT---TEEEEECT-TSCEEEEE------CCSTTCCCCCEEECTT---SCEEEECS-S-EEEEE
T ss_pred EEECCCCCEEEe---ccCC---CeEEEECC-CCcEEEEE------CCccCCccceeEeCCC---CCEEEEcc-C-ceEEe
Confidence 999999986655 3222 45999998 44433221 1112233667777764 55554444 4 66665
Q ss_pred e
Q 014302 418 P 418 (427)
Q Consensus 418 ~ 418 (427)
+
T Consensus 297 ~ 297 (300)
T 2qc5_A 297 N 297 (300)
T ss_dssp E
T ss_pred C
Confidence 4
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.86 E-value=1.1e-06 Score=79.13 Aligned_cols=198 Identities=11% Similarity=0.125 Sum_probs=115.4
Q ss_pred CeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCC
Q 014302 145 DVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDG 223 (427)
Q Consensus 145 ~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 223 (427)
-..+..|+|++..++.+... +.|..|+.. ++ ....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~---------~~--------------~~~~--------------------- 49 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSF---------TK--------------QVQR--------------------- 49 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETT---------TC--------------CEEE---------------------
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECC---------CC--------------cEEE---------------------
Confidence 45688999977677777654 888899876 11 0000
Q ss_pred CCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcccccc-----CCCCeeEEEECCCCCEEEEEEcC
Q 014302 224 RFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS-----TSGFVTGATWDPEGRMILLAFAG 298 (427)
Q Consensus 224 ~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~-----~~~~v~~v~~spdg~~l~~~~~~ 298 (427)
+ .....+.+++++++|+++++ . ++.|.+||..+++...+.. ....+..++++|+|++++.....
T Consensus 50 --------~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 50 --------V-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp --------E-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEEC
T ss_pred --------E-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCc
Confidence 0 01235778999999995544 3 6789999988776543321 22457889999999976644322
Q ss_pred C--------ceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEe--c
Q 014302 299 S--------LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDA--R 368 (427)
Q Consensus 299 ~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~--~ 368 (427)
. ..-.++.+... ... . .........+.++|+||++.|.++ +... +.|.+|++ .
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~-g~~----~-------~~~~~~~~pngi~~spdg~~lyv~--~~~~---~~i~~~~~d~~ 181 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPD-HHV----K-------KYFDQVDISNGLDWSLDHKIFYYI--DSLS---YSVDAFDYDLQ 181 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTT-SCE----E-------EEEEEESBEEEEEECTTSCEEEEE--EGGG---TEEEEEEECTT
T ss_pred ccccccccCCCcEEEEEECC-CCE----E-------EEeeccccccceEEcCCCCEEEEe--cCCC---CcEEEEeccCC
Confidence 1 11123333221 000 0 001111246889999999988775 3333 56999997 4
Q ss_pred cCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 369 RTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
++.+.... -+.........+-.+++.++ |.+....+..++|..|+.
T Consensus 182 ~G~~~~~~--~~~~~~~~~~~p~g~~~d~~---G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 182 TGQISNRR--SVYKLEKEEQIPDGMCIDAE---GKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp TCCEEEEE--EEEECCGGGCEEEEEEEBTT---SCEEEEEETTTEEEEECT
T ss_pred CCcccCcE--EEEECCCCCCCCCeeEECCC---CCEEEEEcCCCEEEEEcC
Confidence 55432111 11111111123556777654 677777777888888763
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.85 E-value=1.1e-07 Score=89.28 Aligned_cols=228 Identities=14% Similarity=0.036 Sum_probs=131.2
Q ss_pred eeEEcCCCCEEEEEe----------CCCeEEEEEccCCCCcceeecc--C---CcCCeeEEEEccCCCceEEEec--CCe
Q 014302 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSGKDACILTS--D---SQRDVKVLEWRPNGGRSLSVGC--KGG 166 (427)
Q Consensus 104 ~l~~sp~g~~lat~~----------~d~~v~vwd~~~~~~~~~~~~~--~---~~~~v~~l~~sp~~~~~la~g~--~~~ 166 (427)
.++++|||++|.++. .++.|.++|..+.......... . .......++|+|||++++++.. .+.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999999887775 3678999988776221111111 0 1123467899999966665543 377
Q ss_pred EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCC------CceeeeEeCCCCCCcc----cCceE----
Q 014302 167 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNG------EQITALSWGPDGRFPG----LGTPI---- 232 (427)
Q Consensus 167 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~spdg~~l~----~~~~~---- 232 (427)
|.+.|+. ++ +.+..+..... ..-.-+++++||+++. .+...
T Consensus 202 VsVID~~---------t~----------------kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 202 VGVVDLE---------GK----------------TFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp EEEEETT---------TT----------------EEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred EEEEECC---------CC----------------eEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 8899987 11 11111111000 0011244556665421 11111
Q ss_pred ---EeccCCe-EEEEEccCCCEEEEEecCCcEEEEEcCCCCcc---ccc-------c---CCCCeeEEEECCCCCEEEEE
Q 014302 233 ---RRGFGGL-SILKWSPTGDYFFAAKFDGTFYLWETNTWTSE---PWS-------S---TSGFVTGATWDPEGRMILLA 295 (427)
Q Consensus 233 ---~~~~~~v-~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~---~~~-------~---~~~~v~~v~~spdg~~l~~~ 295 (427)
.....++ ..+.++++++.++..+..+.|.+.|+...... .+. . .......++++|++++++++
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 0001111 13467999998887777899999998654421 110 0 01122347899999988876
Q ss_pred EcC---------CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEE
Q 014302 296 FAG---------SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIY 365 (427)
Q Consensus 296 ~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vw 365 (427)
..+ .+.+.+++....+. ...+..+.....++|+|||+ +|+++...+ +.|.|+
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kv-------------v~~I~vg~~P~gia~spDg~~~lyv~n~~s-----~~VsVI 398 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGER-------------INKIELGHEIDSINVSQDAEPLLYALSAGT-----QTLHIY 398 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCE-------------EEEEEEEEEECEEEECCSSSCEEEEEETTT-----TEEEEE
T ss_pred ecccccccccCCCCEEEEEECCCCeE-------------EEEEECCCCcCeEEEccCCCEEEEEEcCCC-----CeEEEE
Confidence 532 23566666655321 11222233578999999999 787753223 569999
Q ss_pred EeccCceEE
Q 014302 366 DARRTPLIS 374 (427)
Q Consensus 366 d~~~~~~~~ 374 (427)
|+.+++.+.
T Consensus 399 D~~t~kvv~ 407 (426)
T 3c75_H 399 DAATGEELR 407 (426)
T ss_dssp ETTTCCEEE
T ss_pred ECCCCCEEE
Confidence 999998763
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.77 E-value=3.4e-06 Score=76.90 Aligned_cols=155 Identities=12% Similarity=0.093 Sum_probs=88.9
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcccccc-----CCCCeeEEEECCCCCEEEEEEcC-----Cceeeeeee
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS-----TSGFVTGATWDPEGRMILLAFAG-----SLTLGSIHF 307 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~-----~~~~v~~v~~spdg~~l~~~~~~-----~~~i~~~~~ 307 (427)
.+.+++|+|+|+++++. +..|.+||..+++...+.. ....+..++++|+|+.++..... .+.++.++
T Consensus 91 ~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~- 167 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA- 167 (326)
T ss_dssp CEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-
T ss_pred cceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-
Confidence 57788999999877654 3459999988776543321 12357899999999976644321 23455554
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec--cC-ceEEEeeeeeeeCC
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR--RT-PLISLSLIGFIRGP 384 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~--~~-~~~~~~~~~~~~~~ 384 (427)
+. .+ ..+ .......+.++|+|||+.|.++ +..+ +.|.+|++. ++ .+... .-+....
T Consensus 168 -~g--~~----~~~-------~~~~~~~~~i~~s~dg~~lyv~--~~~~---~~I~~~d~~~~~Gl~~~~~--~~~~~~~ 226 (326)
T 2ghs_A 168 -KG--KV----TKL-------FADISIPNSICFSPDGTTGYFV--DTKV---NRLMRVPLDARTGLPTGKA--EVFIDST 226 (326)
T ss_dssp -TT--EE----EEE-------EEEESSEEEEEECTTSCEEEEE--ETTT---CEEEEEEBCTTTCCBSSCC--EEEEECT
T ss_pred -CC--cE----EEe-------eCCCcccCCeEEcCCCCEEEEE--ECCC---CEEEEEEcccccCCcccCc--eEEEECC
Confidence 21 11 000 0111246789999999988775 3333 569999985 44 32100 0011111
Q ss_pred CCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 385 GDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 385 ~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
.....+..+++.++ |.++...+.++.|..|+.
T Consensus 227 ~~~~~p~gi~~d~~---G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 227 GIKGGMDGSVCDAE---GHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp TSSSEEEEEEECTT---SCEEEEEETTTEEEEECT
T ss_pred CCCCCCCeeEECCC---CCEEEEEeCCCEEEEECC
Confidence 11122345556543 666666666677777763
No 217
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.76 E-value=6.9e-07 Score=90.38 Aligned_cols=204 Identities=9% Similarity=0.087 Sum_probs=124.1
Q ss_pred eeeeEEcCCCCEEEEEeCCC-------------eEEEEEccCCCCcceeeccC---CcCCeeEEEEccCCCceEEEecC-
Q 014302 102 LQGVSWHQHKHIVAFISGST-------------QVIVRDYEDSGKDACILTSD---SQRDVKVLEWRPNGGRSLSVGCK- 164 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~-------------~v~vwd~~~~~~~~~~~~~~---~~~~v~~l~~sp~~~~~la~g~~- 164 (427)
...++|+ ||+.|+.++.+. .|++|++.+.......+... |...+.++.|+|||+.++++...
T Consensus 177 ~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 177 FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 3688999 999999988774 38889887763333333332 33457889999999666554432
Q ss_pred ---CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEE
Q 014302 165 ---GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSI 241 (427)
Q Consensus 165 ---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~ 241 (427)
+.+.+|+++.+. ..+. .+..+......
T Consensus 256 ~~~~~i~~~d~~~~~---------------------~~~~-----------------------------~l~~~~~~~~~ 285 (693)
T 3iuj_A 256 TSGNRLYVKDLSQEN---------------------APLL-----------------------------TVQGDLDADVS 285 (693)
T ss_dssp SSCCEEEEEETTSTT---------------------CCCE-----------------------------EEECSSSSCEE
T ss_pred CCCcEEEEEECCCCC---------------------CceE-----------------------------EEeCCCCceEE
Confidence 367777775100 0000 11112223333
Q ss_pred EEEccCCCEEE-EEecC---CcEEEEEcCCCCc---cccccCCCCeeEEEECCCCCEEEEEEcCCc--eeeeeeeCCCCC
Q 014302 242 LKWSPTGDYFF-AAKFD---GTFYLWETNTWTS---EPWSSTSGFVTGATWDPEGRMILLAFAGSL--TLGSIHFASKPP 312 (427)
Q Consensus 242 ~~~sp~g~~l~-~~~~d---g~v~iwd~~~~~~---~~~~~~~~~v~~v~~spdg~~l~~~~~~~~--~i~~~~~~~~~~ 312 (427)
. |+++|..|+ .+..+ +.|.++|+.+... ..+..+...+. .|++++++|++....++ .|+++++....
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~- 361 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR- 361 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-
Confidence 3 677787776 44433 5799999988765 33345555554 89999999988776664 34554443220
Q ss_pred CccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 313 SLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
...+. +...+.+..+.++++++.|+..+.+- ..+++|+.||+.+++..
T Consensus 362 -----~~~l~------~p~~~~~~~~~~~~d~~~l~~~~ss~--~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 362 -----VREVA------LPGLGSVSGFNGKHDDPALYFGFENY--AQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp -----EEEEC------CSSSSEEEECCCCTTCSCEEEEEECS--SSCCEEEEECTTTCCEE
T ss_pred -----eEEee------cCCCceEEeeecCCCCCEEEEEecCC--CCCCEEEEEECCCCeEE
Confidence 01011 11223567778889999888765432 23477999999877654
No 218
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.73 E-value=1.5e-06 Score=77.21 Aligned_cols=195 Identities=11% Similarity=0.073 Sum_probs=112.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCcc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAA 179 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~ 179 (427)
.+++++++|+|++|+ +.++.|..||. ++ .............+.++.+.|+|..+++.+. .+.+..++.+ +.
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G-~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk-- 109 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSKGAKMITR-DG-RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK--GE-- 109 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBSEEEEECT-TS-CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT--SC--
T ss_pred CCcCeEECCCCCEEE--eCCCCEEEECC-CC-CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC--CC--
Confidence 467889999999888 45788988887 33 1222332223346889999999944444344 3444444432 11
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCc
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGT 259 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~ 259 (427)
. +. .+..... ...+......+++.++|++|++...++.
T Consensus 110 -------------------~---l~-----------~~~~~~~---------~~~~~~~~~~v~~~~~G~~lv~~~~~~~ 147 (276)
T 3no2_A 110 -------------------V---LS-----------KTEFETG---------IERPHAQFRQINKNKKGNYLVPLFATSE 147 (276)
T ss_dssp -------------------E---EE-----------EEEECCS---------CSSGGGSCSCCEECTTSCEEEEETTTTE
T ss_pred -------------------E---EE-----------EEeccCC---------CCcccccccCceECCCCCEEEEecCCCE
Confidence 0 00 0111000 0001112334567899999999999999
Q ss_pred EEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEE
Q 014302 260 FYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIA 339 (427)
Q Consensus 260 v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 339 (427)
|..||.. ++..-.........++...++|+.++++.. ++.+..++..+.....+-... +++.. .-..+..++
T Consensus 148 v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~-~~~v~~~d~~tG~~~w~~~~~--~~~~~----~l~~~~~~~ 219 (276)
T 3no2_A 148 VREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGD-AHCFVQLNLESNRIVRRVNAN--DIEGV----QLFFVAQLF 219 (276)
T ss_dssp EEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBT-TSEEEEECTTTCCEEEEEEGG--GSBSC----CCSEEEEEE
T ss_pred EEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCC-CCeEEEEeCcCCcEEEEecCC--CCCCc----cccccccce
Confidence 9999987 654322233345667888999998876544 435655554432211110000 00000 012478889
Q ss_pred ECCCCCEEEEEEec
Q 014302 340 WDASGERLAVSYKG 353 (427)
Q Consensus 340 ~sp~g~~La~~~~~ 353 (427)
..++|..+++.+.+
T Consensus 220 ~~~~G~i~v~~~~g 233 (276)
T 3no2_A 220 PLQNGGLYICNWQG 233 (276)
T ss_dssp ECTTSCEEEEEECT
T ss_pred EcCCCCEEEEeccC
Confidence 99999999886644
No 219
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=5.2e-06 Score=74.82 Aligned_cols=157 Identities=17% Similarity=0.128 Sum_probs=90.8
Q ss_pred CCeEEEEEccC-CCEEEEEecCCcEEEEEcCCCCcccc-c-----cCCCCeeEEEECCCCCEEEEEEcCC----------
Q 014302 237 GGLSILKWSPT-GDYFFAAKFDGTFYLWETNTWTSEPW-S-----STSGFVTGATWDPEGRMILLAFAGS---------- 299 (427)
Q Consensus 237 ~~v~~~~~sp~-g~~l~~~~~dg~v~iwd~~~~~~~~~-~-----~~~~~v~~v~~spdg~~l~~~~~~~---------- 299 (427)
..+..++++++ |+.++ ++..+.|.+||.. ++...+ . .....+.+++++++|+.+++.....
T Consensus 71 ~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 45778999999 65444 4445579999987 554333 2 1123578999999998776543321
Q ss_pred ----ceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEEC----CCCCEEEEEEecCCCcceeEEEEEEec-cC
Q 014302 300 ----LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWD----ASGERLAVSYKGGDDIYKGLIAIYDAR-RT 370 (427)
Q Consensus 300 ----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~s----p~g~~La~~~~~~~d~~~g~i~vwd~~-~~ 370 (427)
+.++.++.. . .+. ...........++|+ |+|+.|.++ +..+ +.|.+|++. .+
T Consensus 149 ~~~~~~l~~~~~~-g--~~~-----------~~~~~~~~~~~i~~~~~~d~dg~~l~v~--~~~~---~~i~~~~~~~~g 209 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-G--QMI-----------QVDTAFQFPNGIAVRHMNDGRPYQLIVA--ETPT---KKLWSYDIKGPA 209 (314)
T ss_dssp SSSCEEEEEECTT-S--CEE-----------EEEEEESSEEEEEEEECTTSCEEEEEEE--ETTT---TEEEEEEEEETT
T ss_pred cCCCCeEEEECCC-C--CEE-----------EeccCCCCcceEEEecccCCCCCEEEEE--ECCC---CeEEEEECCCCC
Confidence 234443322 1 110 001111246789999 999877664 3333 459999986 34
Q ss_pred ceEEEeeeeeeeCCCCC-CCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 371 PLISLSLIGFIRGPGDN-PKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 371 ~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
....... +..-.... ..+..+++.++ |.++...+.++.|..|+.
T Consensus 210 ~~~~~~~--~~~~~~~~~~~p~~i~~d~~---G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 210 KIENKKV--WGHIPGTHEGGADGMDFDED---NNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEE--EEECCCCSSCEEEEEEEBTT---CCEEEEEETTTEEEEECT
T ss_pred ccccceE--EEECCCCCCCCCCceEECCC---CCEEEEEcCCCEEEEEcC
Confidence 3221111 11111111 23567777764 677777777888888864
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.63 E-value=3.5e-06 Score=79.39 Aligned_cols=209 Identities=13% Similarity=0.043 Sum_probs=114.2
Q ss_pred eEEcCCCCEEEEEeCCC--eEEEEEccCCCCcceee--c-cCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcc
Q 014302 105 VSWHQHKHIVAFISGST--QVIVRDYEDSGKDACIL--T-SDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAA 179 (427)
Q Consensus 105 l~~sp~g~~lat~~~d~--~v~vwd~~~~~~~~~~~--~-~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~ 179 (427)
++|+|+++.|+++..++ .|.+|+...... .... . ......+.+++++|++..++++..++.|..|+.+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~------ 248 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVK------ 248 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETT------
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce-eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECC------
Confidence 89999999988887765 777777665421 1111 1 2144567899999954366665455778888876
Q ss_pred ccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCC
Q 014302 180 SVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDG 258 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg 258 (427)
.+ ......... ..+. ....+...++|+|++..|+ +....+
T Consensus 249 ---~~--------------~~~~~~~~~-------------~~g~---------~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 249 ---TQ--------------EVTLIKQLE-------------LSGS---------LGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp ---TC--------------CEEEEEECC-------------CCSC---------CCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred ---CC--------------CEEEEeccc-------------ccCC---------CCCCccccEEEeCCCCEEEEEeCCCC
Confidence 11 101110000 0000 0000112789999655555 556678
Q ss_pred cEEEEEcCCCCccccccC---------------CCCeeEEEECCCCCEEEEEEc-CCceeeeeeeCCCCC-Ccccccccc
Q 014302 259 TFYLWETNTWTSEPWSST---------------SGFVTGATWDPEGRMILLAFA-GSLTLGSIHFASKPP-SLDAHLLPV 321 (427)
Q Consensus 259 ~v~iwd~~~~~~~~~~~~---------------~~~v~~v~~spdg~~l~~~~~-~~~~i~~~~~~~~~~-~~~~~~~~~ 321 (427)
.|+.|+.... ...+.++ -.....++++|+|+. +++.. ....|+.+++.+... .+.++....
T Consensus 290 ~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~l-yvad~~~~~~I~~~~~~~G~v~~~~g~~~~~ 367 (409)
T 3hrp_A 290 SVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNF-YIVDGFKGYCLRKLDILDGYVSTVAGQVDVA 367 (409)
T ss_dssp EEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCE-EEEETTTTCEEEEEETTTTEEEEEEECTTCB
T ss_pred EEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCE-EEEeCCCCCEEEEEECCCCEEEEEeCCCCCC
Confidence 8999986543 2111111 245789999999994 44555 566787777544311 111110000
Q ss_pred ccccce-eeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEe
Q 014302 322 DLPDIV-SLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDA 367 (427)
Q Consensus 322 ~~~~~~-~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~ 367 (427)
-..... ....-.....++++++|.++++ +... +.|+.+++
T Consensus 368 g~~~g~~~~~~~~~P~giavd~~g~lyVa---d~~n---~~Ir~i~~ 408 (409)
T 3hrp_A 368 SQIDGTPLEATFNYPYDICYDGEGGYWIA---EAWG---KAIRKYAV 408 (409)
T ss_dssp SCCCBSTTTCCBSSEEEEEECSSSEEEEE---ESTT---CEEEEEEE
T ss_pred CcCCCChhceEeCCceEEEEcCCCCEEEE---ECCC---CeEEEEEe
Confidence 000000 0000125789999999766655 4444 45777765
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.62 E-value=1.6e-06 Score=80.09 Aligned_cols=226 Identities=10% Similarity=-0.057 Sum_probs=122.0
Q ss_pred eeEEcCCCCEEEEEe----------CCCeEEEEEccCCCCcceeeccCC-------cCCeeEEEEccCCCceEEEec--C
Q 014302 104 GVSWHQHKHIVAFIS----------GSTQVIVRDYEDSGKDACILTSDS-------QRDVKVLEWRPNGGRSLSVGC--K 164 (427)
Q Consensus 104 ~l~~sp~g~~lat~~----------~d~~v~vwd~~~~~~~~~~~~~~~-------~~~v~~l~~sp~~~~~la~g~--~ 164 (427)
.+.++|||++|.++. .+++|.+||..+. +......-. ......++++|||+.++++.. .
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~ 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC
Confidence 689999999888875 3689999999887 222221111 123567999999965555542 3
Q ss_pred CeEEE--EeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc----c-----Cc---
Q 014302 165 GGICI--WAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG----L-----GT--- 230 (427)
Q Consensus 165 ~~i~i--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~----~-----~~--- 230 (427)
+.+.+ +|... ...+..+ +. ......+ . . .-+++++||+++. . +.
T Consensus 147 ~~v~V~~iD~~t---v~~i~v~-----------~~-----~~~~p~g-~-~-~~~~~~~dg~~~~vd~~~~~~~~~~v~~ 204 (368)
T 1mda_H 147 AAAGLSVPGASD---DQLTKSA-----------SC-----FHIHPGA-A-A-THYLGSCPASLAASDLAAAPAAAGIVGA 204 (368)
T ss_dssp CEEEEEETTTEE---EEEEECS-----------SC-----CCCEEEE-T-T-EEECCCCTTSCEEEECCSSCCCCEECCC
T ss_pred CeEEEEEEchhh---ceEEECC-----------Cc-----eEEccCC-C-e-EEEEEcCCCCEEEEECccccccCCeEEE
Confidence 56888 88751 0000000 00 0000000 0 0 0123333433311 0 00
Q ss_pred ----eEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc---cccc-------cC---CCCeeEEEECCCCCEEE
Q 014302 231 ----PIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS---EPWS-------ST---SGFVTGATWDPEGRMIL 293 (427)
Q Consensus 231 ----~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~---~~~~-------~~---~~~v~~v~~spdg~~l~ 293 (427)
.+.....+. . ++++..++..+. +.|.+.|+.+... ..+. .+ ......++++||+++++
T Consensus 205 ~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ly 279 (368)
T 1mda_H 205 QCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIM 279 (368)
T ss_dssp CSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred EeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEE
Confidence 011111222 3 666776665555 8999999865432 1111 01 11122278999999988
Q ss_pred EEEc---C-----CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEe-cCCCcceeEEEE
Q 014302 294 LAFA---G-----SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYK-GGDDIYKGLIAI 364 (427)
Q Consensus 294 ~~~~---~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~-~~~d~~~g~i~v 364 (427)
++.. . .....++++...+. ...+..+.....|+|+|||++|+++.. ++ ++|.+
T Consensus 280 V~~~~~~~~~~~~~~~~~ViD~~t~~v-------------v~~i~vg~~p~gi~~s~Dg~~l~va~~~~~-----~~VsV 341 (368)
T 1mda_H 280 ILTVEHSRSCLAAAENTSSVTASVGQT-------------SGPISNGHDSDAIIAAQDGASDNYANSAGT-----EVLDI 341 (368)
T ss_dssp EEEEECSSCTTSCEEEEEEEESSSCCE-------------EECCEEEEEECEEEECCSSSCEEEEEETTT-----TEEEE
T ss_pred EEeccccCcccccCCCEEEEECCCCeE-------------EEEEECCCCcceEEECCCCCEEEEEccCCC-----CeEEE
Confidence 7654 2 22334666554311 111222236789999999997666544 23 45999
Q ss_pred EEeccCceEEEe
Q 014302 365 YDARRTPLISLS 376 (427)
Q Consensus 365 wd~~~~~~~~~~ 376 (427)
+|+.+++.+...
T Consensus 342 ID~~t~kvv~~I 353 (368)
T 1mda_H 342 YDAASDQDQSSV 353 (368)
T ss_dssp EESSSCEEEEEC
T ss_pred EECCCCcEEEEE
Confidence 999998877443
No 222
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.61 E-value=1.5e-05 Score=74.02 Aligned_cols=203 Identities=11% Similarity=0.046 Sum_probs=112.2
Q ss_pred eeeeEEcCCCCEEEEEeC--CCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEE-ecCCeEEEEeccCCCCc
Q 014302 102 LQGVSWHQHKHIVAFISG--STQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSV-GCKGGICIWAPSYPGNA 178 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~-g~~~~i~iw~~~~~~~~ 178 (427)
-..++|+|||++|+++.. +++|.++| .+. +.......... ++.+.|++.+.+++ ..++.+.+++.. ++.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~--~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~~--g~~ 198 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGG--SSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDHA--GGA 198 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCC--CEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEECC--CcE
Confidence 457899999999998864 57899998 665 23222012111 24566776554444 345777777762 110
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCC-eEEEEEccCCCEEEEEecC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGG-LSILKWSPTGDYFFAAKFD 257 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~-v~~~~~sp~g~~l~~~~~d 257 (427)
...... .. .+ ....+ .....+.+++..++..+..
T Consensus 199 ------------------------~~~~~~---~~-----------------~~-~~~~p~~~~~~~~~~~~~~~~~~~~ 233 (373)
T 2mad_H 199 ------------------------AGAGLV---GA-----------------ML-TAAQNLLTQPAQANKSGRIVWPVYS 233 (373)
T ss_pred ------------------------EEEEec---cc-----------------cc-cCCcceeecceeEecCCEEEEEcCC
Confidence 000000 00 00 00011 1224466666655544467
Q ss_pred CcEEEEEcCCCCcc---cccc----------CCCCeeEEEECCCCCEEEEEEcC---------CceeeeeeeCCCCCCcc
Q 014302 258 GTFYLWETNTWTSE---PWSS----------TSGFVTGATWDPEGRMILLAFAG---------SLTLGSIHFASKPPSLD 315 (427)
Q Consensus 258 g~v~iwd~~~~~~~---~~~~----------~~~~v~~v~~spdg~~l~~~~~~---------~~~i~~~~~~~~~~~~~ 315 (427)
+.+.+.|+...... .+.. .......+.++||++.++++..+ .+.+.+++....+.
T Consensus 234 ~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--- 310 (373)
T 2mad_H 234 GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--- 310 (373)
T ss_pred ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE---
Confidence 88888888654321 1110 11223347788888888776532 23566666544310
Q ss_pred ccccccccccceeeccCCceeEEEECCCCC-EEEEEEecCCCcceeEEEEEEeccCceEEE
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGE-RLAVSYKGGDDIYKGLIAIYDARRTPLISL 375 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~La~~~~~~~d~~~g~i~vwd~~~~~~~~~ 375 (427)
...+..+.....++|+|||+ +|+++..+ + +.|.+||+.+++.+..
T Consensus 311 ----------v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~--~---~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 311 ----------SSQISLGHDVDAISVAQDGGPDLYALSAG--T---EVLHIYDAGAGDQDQS 356 (373)
T ss_pred ----------EEEEECCCCcCeEEECCCCCeEEEEEcCC--C---CeEEEEECCCCCEEee
Confidence 12223334679999999999 56663212 2 5699999999887633
No 223
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.59 E-value=3.6e-05 Score=69.88 Aligned_cols=247 Identities=14% Similarity=0.064 Sum_probs=136.4
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeecc-------------------CCcCCeeEEEEcc-CCCceEEE
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTS-------------------DSQRDVKVLEWRP-NGGRSLSV 161 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~-------------------~~~~~v~~l~~sp-~~~~~la~ 161 (427)
..+++|+++|+++.++..++.|..|+.... ....... .....+..+++.+ ++ .++++
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~ 97 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNS--GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIV 97 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTT--CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCC--ceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEE
Confidence 467889999997888888899988876654 1211110 0113578899998 66 66666
Q ss_pred ecCCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEE
Q 014302 162 GCKGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSI 241 (427)
Q Consensus 162 g~~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~ 241 (427)
...+.+..++.+ .+ ....+. .. ..+ ........
T Consensus 98 d~~~~i~~~d~~---------~g--------------~~~~~~---~~-----------~~~----------~~~~~p~~ 130 (322)
T 2fp8_A 98 DCYYHLSVVGSE---------GG--------------HATQLA---TS-----------VDG----------VPFKWLYA 130 (322)
T ss_dssp ETTTEEEEECTT---------CE--------------ECEEEE---SE-----------ETT----------EECSCEEE
T ss_pred ECCCCEEEEeCC---------CC--------------EEEEec---cc-----------CCC----------Ccccccce
Confidence 555667777654 11 101000 00 000 00123456
Q ss_pred EEEcc-CCCEEEEEec-----------------CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceee
Q 014302 242 LKWSP-TGDYFFAAKF-----------------DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLG 303 (427)
Q Consensus 242 ~~~sp-~g~~l~~~~~-----------------dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~ 303 (427)
+++.+ +|+..++... ++.|..||..+++...+.........++|+|+|+.|+++......|+
T Consensus 131 i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~ 210 (322)
T 2fp8_A 131 VTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIV 210 (322)
T ss_dssp EEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEE
T ss_pred EEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEE
Confidence 77888 7765554321 36688888766554333222234567999999998877766656777
Q ss_pred eeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC----cceeEEEEEEeccCceEEEeeee
Q 014302 304 SIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD----IYKGLIAIYDARRTPLISLSLIG 379 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d----~~~g~i~vwd~~~~~~~~~~~~~ 379 (427)
.+++..... +.... ... ..+ ...++++++|++.++....... ...+.|..+|.. +..+..
T Consensus 211 ~~~~~~~~~---~~~~~-----~~~--~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~---- 274 (322)
T 2fp8_A 211 KYWLEGPKK---GTAEV-----LVK--IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEV---- 274 (322)
T ss_dssp EEESSSTTT---TCEEE-----EEE--CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEE----
T ss_pred EEECCCCcC---Cccce-----EEe--CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEE----
Confidence 777654211 00000 001 112 6789999999977664331000 001557788764 444322
Q ss_pred eeeCCC-C-CCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 380 FIRGPG-D-NPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 380 ~~~~~~-~-~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
+..+. . ...+..+++. .+.|.......++|..|++
T Consensus 275 -~~~~~g~~~~~~~~~~~~----~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 275 -IPLPPPFAGEHFEQIQEH----DGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp -EECCTTTTTSCCCEEEEE----TTEEEEECSSCSEEEEEEC
T ss_pred -EECCCCCccccceEEEEe----CCEEEEeecCCCceEEEec
Confidence 12221 1 1223455552 3566666667888988874
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.55 E-value=2.8e-05 Score=72.52 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=109.3
Q ss_pred eeeEEcCCCCEEEEEeCC------CeEEEEEccCCCCcceeecc-C-C-cCCeeEEEEccCCCceEEEec----------
Q 014302 103 QGVSWHQHKHIVAFISGS------TQVIVRDYEDSGKDACILTS-D-S-QRDVKVLEWRPNGGRSLSVGC---------- 163 (427)
Q Consensus 103 ~~l~~sp~g~~lat~~~d------~~v~vwd~~~~~~~~~~~~~-~-~-~~~v~~l~~sp~~~~~la~g~---------- 163 (427)
..+..+|+| +++++..+ +.|.+.|..+. +...... + . ..--..+.|+|+++ .+.++.
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~--~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF--EPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDG 216 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC--CEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTC
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC--eEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccc
Confidence 456778999 66665444 78989887765 3332222 1 1 12234688999995 555553
Q ss_pred ----------CCeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEE
Q 014302 164 ----------KGGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIR 233 (427)
Q Consensus 164 ----------~~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~ 233 (427)
.+.|.+||++ ++ +..+.+.-. .
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~---------~~----------------k~~~tI~vg-----------~------------ 248 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLR---------KR----------------KRIHSLTLG-----------E------------ 248 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETT---------TT----------------EEEEEEESC-----------T------------
T ss_pred cchhhhhhccCCEEEEEECC---------CC----------------cEeeEEecC-----------C------------
Confidence 4789999987 11 112211110 0
Q ss_pred eccCCeEEEEE--ccCCCEEEEEe------cCCcEEEEEcCCCCc-------------cccc--------cCCCCeeEEE
Q 014302 234 RGFGGLSILKW--SPTGDYFFAAK------FDGTFYLWETNTWTS-------------EPWS--------STSGFVTGAT 284 (427)
Q Consensus 234 ~~~~~v~~~~~--sp~g~~l~~~~------~dg~v~iwd~~~~~~-------------~~~~--------~~~~~v~~v~ 284 (427)
.......+.| +|+++++++++ .+++|.+|....++. .... ........+.
T Consensus 249 -~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 249 -ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp -TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred -CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 0012223434 88888887555 455776655433211 0000 0124578899
Q ss_pred ECCCCCEEEEEEcCCceeeeeeeCCC-CCCccccccccc--cccc---eeeccCCceeEEEECCCCCEEEEEE
Q 014302 285 WDPEGRMILLAFAGSLTLGSIHFASK-PPSLDAHLLPVD--LPDI---VSLTGSQGIEKIAWDASGERLAVSY 351 (427)
Q Consensus 285 ~spdg~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~--~~~~---~~~~~~~~i~~v~~sp~g~~La~~~ 351 (427)
+|+||++|+++....+.|.++++.+. ...+.+... +- +... ......+....++++|||++|.++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~-tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVK-LGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEE-CBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEE-eCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999999999888889999888643 122111110 00 0000 0000112468999999999999963
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.54 E-value=3.1e-06 Score=77.77 Aligned_cols=212 Identities=11% Similarity=0.067 Sum_probs=114.7
Q ss_pred ceeeeEEcCCCCEEEEEeC-----CCeEEEEEccCCCCcceeecc-----CCcCCeeEEEEccCCCceEEEec----CCe
Q 014302 101 DLQGVSWHQHKHIVAFISG-----STQVIVRDYEDSGKDACILTS-----DSQRDVKVLEWRPNGGRSLSVGC----KGG 166 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~-----d~~v~vwd~~~~~~~~~~~~~-----~~~~~v~~l~~sp~~~~~la~g~----~~~ 166 (427)
.+..++++++|+++++-.. +..|.+||+.++.. ...... .+...+..++++|++..++++.. ++.
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 7899999999986665543 57899999876621 111111 12345689999987546555543 478
Q ss_pred EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcc---cCceEEeccCCeEEEE
Q 014302 167 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPG---LGTPIRRGFGGLSILK 243 (427)
Q Consensus 167 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~---~~~~~~~~~~~v~~~~ 243 (427)
|.+|+.. ++ .....+..+.........+.++|..+. ....+......+..++
T Consensus 147 i~v~d~~---------~g----------------~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia 201 (343)
T 2qe8_A 147 LIRVDLQ---------TG----------------LAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV 201 (343)
T ss_dssp EEEEETT---------TC----------------CEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE
T ss_pred EEEEECC---------CC----------------CEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE
Confidence 9999986 11 111111111000000011122222111 0000111123567899
Q ss_pred EccCCCEEEEEecCC-cEEEEEcCC---CCc------c--ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCC
Q 014302 244 WSPTGDYFFAAKFDG-TFYLWETNT---WTS------E--PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP 311 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg-~v~iwd~~~---~~~------~--~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~ 311 (427)
|+|+|+.|+.+..++ .+..++... ... . ...++......++++++|..+++ ....+.|..|+..+.
T Consensus 202 ~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va-~~~~~~V~~~d~~~G- 279 (343)
T 2qe8_A 202 LDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG-DLAHSAIGVITSADR- 279 (343)
T ss_dssp ECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE-EGGGTEEEEEETTTT-
T ss_pred eccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE-ccCCCeEEEEECCCC-
Confidence 999999999776655 555555421 110 0 11123445678999999976654 455557777776222
Q ss_pred CCccccccccccccceeeccCCceeEEEECCCCCEEEEE
Q 014302 312 PSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~ 350 (427)
.+ .. .........+.+++|+++|++++++
T Consensus 280 -~~----~~-----~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 280 -AY----KL-----LVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp -EE----EE-----EEECGGGSCEEEEEECTTSCEEEEE
T ss_pred -CE----EE-----EEECCceecCCeeEECCCCcEEEEe
Confidence 11 00 0000112367899999999877663
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.51 E-value=0.00013 Score=64.07 Aligned_cols=228 Identities=11% Similarity=0.033 Sum_probs=130.2
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCcc---eeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCcc
Q 014302 111 KHIVAFISGSTQVIVRDYEDSGKDA---CILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAA 186 (427)
Q Consensus 111 g~~lat~~~d~~v~vwd~~~~~~~~---~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~ 186 (427)
|++|..+.. +.|+.++++...... ..........+..++|+|++..++.+... +.|..++.+ .+
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~---------g~-- 68 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLH---------GG-- 68 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESS---------SC--
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecC---------CC--
Confidence 455666653 478888887652111 11111123457899999977566655543 778888775 00
Q ss_pred cccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCcEEEEEc
Q 014302 187 SFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGTFYLWET 265 (427)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~v~iwd~ 265 (427)
....+ +.........+++++++..|+ +....+.|.++++
T Consensus 69 ------------~~~~~----------------------------~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 69 ------------EPTTI----------------------------IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp ------------CCEEE----------------------------ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ------------CcEEE----------------------------EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 00000 000113466889999877777 4455678999998
Q ss_pred CCCCccccc-cCCCCeeEEEECCCCCEEEEEEcC--CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECC
Q 014302 266 NTWTSEPWS-STSGFVTGATWDPEGRMILLAFAG--SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDA 342 (427)
Q Consensus 266 ~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp 342 (427)
.......+. ........++++|++..|+.+... .+.|..+.+....... .. ...-.....++++|
T Consensus 109 ~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~---~~---------~~~~~~P~gia~d~ 176 (267)
T 1npe_A 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI---LA---------QDNLGLPNGLTFDA 176 (267)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE---EE---------CTTCSCEEEEEEET
T ss_pred CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEE---EE---------ECCCCCCcEEEEcC
Confidence 654332222 222467899999987777666544 3466666554321100 00 00112578999999
Q ss_pred CCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 343 SGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 343 ~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
++.+|.++-.+ . +.|.++++.......+ +.+ ...|..++.. .+.++.+.+.+++|..++.
T Consensus 177 ~~~~lyv~d~~--~---~~I~~~~~~g~~~~~~-----~~~---~~~P~gi~~d----~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 177 FSSQLCWVDAG--T---HRAECLNPAQPGRRKV-----LEG---LQYPFAVTSY----GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp TTTEEEEEETT--T---TEEEEEETTEEEEEEE-----EEC---CCSEEEEEEE----TTEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEECC--C---CEEEEEecCCCceEEE-----ecC---CCCceEEEEe----CCEEEEEECCCCeEEEEeC
Confidence 98888776333 2 4699999876443222 111 1224556543 3566777777788877764
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.48 E-value=1e-05 Score=72.87 Aligned_cols=177 Identities=12% Similarity=0.175 Sum_probs=101.8
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeecc---C-CcCCeeEEEEccCCCceEEE----ecC--------
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTS---D-SQRDVKVLEWRPNGGRSLSV----GCK-------- 164 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~---~-~~~~v~~l~~sp~~~~~la~----g~~-------- 164 (427)
.+..++++++|+++++...++.|.+|+.+ + ....+.. + ....+.++++.|+| .++++ |..
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g--~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDAD-G--QAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-S--CEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCC
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCC-C--CEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCcccccccccc
Confidence 57899999999977766666889898875 3 1222211 1 12346789999998 56654 211
Q ss_pred ----CeEEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC-CCCCcccCceEEeccCCe
Q 014302 165 ----GGICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP-DGRFPGLGTPIRRGFGGL 239 (427)
Q Consensus 165 ----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~v 239 (427)
+.-.||.++ + .|+.. .+. .....
T Consensus 163 ~~~~~~~~v~~~d-----------------------------------------------~~~g~~~----~~~-~~~~p 190 (305)
T 3dr2_A 163 DPELAHHSVYRLP-----------------------------------------------PDGSPLQ----RMA-DLDHP 190 (305)
T ss_dssp CCSSSCEEEEEEC-----------------------------------------------SSSCCCE----EEE-EESSE
T ss_pred ccccCCCeEEEEc-----------------------------------------------CCCCcEE----EEe-cCCCC
Confidence 012233222 1 11110 011 12345
Q ss_pred EEEEEccCCCEEEEEecC------CcEEEEEcCCCCc---cccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 240 SILKWSPTGDYFFAAKFD------GTFYLWETNTWTS---EPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 240 ~~~~~sp~g~~l~~~~~d------g~v~iwd~~~~~~---~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
..++|+||++.|+.+... +.|++||+..... ..+. ........+++.++|+..+ +. .+ .+.+++...
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~-~~-gv~~~~~~g 267 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SS-GT-GVCVFDSDG 267 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CC-SS-EEEEECTTS
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ec-CC-cEEEECCCC
Confidence 678999999988866554 6899999875431 1111 1234456789999999544 33 33 344444322
Q ss_pred CCCCccccccccccccceeeccCCceeEEEECCCCCEEEEE
Q 014302 310 KPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~ 350 (427)
+ . ...+.....+.+++|+|+++.|.++
T Consensus 268 ~---~-----------~~~~~~~~~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 268 Q---L-----------LGHIPTPGTASNCTFDQAQQRLFIT 294 (305)
T ss_dssp C---E-----------EEEEECSSCCCEEEECTTSCEEEEE
T ss_pred C---E-----------EEEEECCCceeEEEEeCCCCEEEEE
Confidence 1 1 1111112257899999999988875
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.42 E-value=5.2e-06 Score=76.58 Aligned_cols=245 Identities=8% Similarity=-0.072 Sum_probs=128.0
Q ss_pred eEEEEEccCCCCcceeec-cCCcCCeeEEEEccCCCceEEEec----------CCeEEEEeccCCCCccccccCcccccc
Q 014302 122 QVIVRDYEDSGKDACILT-SDSQRDVKVLEWRPNGGRSLSVGC----------KGGICIWAPSYPGNAASVRSGAASFLG 190 (427)
Q Consensus 122 ~v~vwd~~~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~la~g~----------~~~i~iw~~~~~~~~~~~~~~~~~~~~ 190 (427)
+|.+.|..+. +..... .+. .+ .+.++||++.++++.. ++.|.+||.. ++
T Consensus 47 ~vsvID~~t~--~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~---------T~------ 106 (368)
T 1mda_H 47 ENWVSCAGCG--VTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV---------TF------ 106 (368)
T ss_dssp EEEEEETTTT--EEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT---------TC------
T ss_pred eEEEEECCCC--eEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC---------CC------
Confidence 7888887776 333222 233 34 7999999966655541 3779999987 11
Q ss_pred cccCCCCcceeEeehhccc-C-----CCceeeeEeCCCCCCcccC-----ceEEe--ccC-CeEEEE------EccCCCE
Q 014302 191 ALSRGPGTRWTLVDFLRSQ-N-----GEQITALSWGPDGRFPGLG-----TPIRR--GFG-GLSILK------WSPTGDY 250 (427)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~-~-----~~~v~~~~~spdg~~l~~~-----~~~~~--~~~-~v~~~~------~sp~g~~ 250 (427)
..+..+..+ . ......++++|||+++... ..+.. -.. .+..+. +.|+++.
T Consensus 107 ----------~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~ 176 (368)
T 1mda_H 107 ----------LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAA 176 (368)
T ss_dssp ----------CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETT
T ss_pred ----------CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCe
Confidence 222222211 0 1234577888888775421 11111 000 011221 2455543
Q ss_pred EE-EEecCCcEEEEEcCC-----CCccc-----cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccc
Q 014302 251 FF-AAKFDGTFYLWETNT-----WTSEP-----WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLL 319 (427)
Q Consensus 251 l~-~~~~dg~v~iwd~~~-----~~~~~-----~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~ 319 (427)
.+ +.+.|+.+.+.|+.+ ++... +.....+. . ++++..+++.+. +.+..+++......+..
T Consensus 177 ~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~--- 247 (368)
T 1mda_H 177 THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKA--- 247 (368)
T ss_dssp EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS--SCCEEEECCSSCCEEEC---
T ss_pred EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC--CEEEEEECCCCcceEEE---
Confidence 33 555677777777765 22210 11112222 2 555666555544 46777776542111100
Q ss_pred ccccccceeec---cCCceeEEEECCCCCEEEEEEe-c-CC----CcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCc
Q 014302 320 PVDLPDIVSLT---GSQGIEKIAWDASGERLAVSYK-G-GD----DIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKP 390 (427)
Q Consensus 320 ~~~~~~~~~~~---~~~~i~~v~~sp~g~~La~~~~-~-~~----d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 390 (427)
.+.+....... .......++++||+++|.++.. . .. + ..+.++|+.+++.+...+.|. .+
T Consensus 248 ~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~---~~~~ViD~~t~~vv~~i~vg~--------~p 316 (368)
T 1mda_H 248 AIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA---ENTSSVTASVGQTSGPISNGH--------DS 316 (368)
T ss_dssp CCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE---EEEEEEESSSCCEEECCEEEE--------EE
T ss_pred EEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC---CCEEEEECCCCeEEEEEECCC--------Cc
Confidence 01110000000 0012233789999999988543 1 10 1 225699999998876555443 26
Q ss_pred eeEEeccCCCCCc-eeEEEe-eCceEEEEec
Q 014302 391 VAFSFHDKFKQGP-LLSVCW-SSGFCCTYPL 419 (427)
Q Consensus 391 ~~~~f~~~~~~g~-~l~v~~-~~g~i~~~~~ 419 (427)
..++|.|+ |. ++.+.+ .++.|.++++
T Consensus 317 ~gi~~s~D---g~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 317 DAIIAAQD---GASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp CEEEECCS---SSCEEEEEETTTTEEEEEES
T ss_pred ceEEECCC---CCEEEEEccCCCCeEEEEEC
Confidence 68999886 54 555555 5899999985
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.41 E-value=0.00049 Score=60.34 Aligned_cols=219 Identities=10% Similarity=0.052 Sum_probs=128.3
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~ 178 (427)
.+..++|++++..|..+ ..++.|.+++.+.. ...............+++.|++..++.+... +.|.+++.+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~--~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~----- 109 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGG--EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMD----- 109 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSC--CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCC--CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcC-----
Confidence 46789999977655544 45689999888755 2222222222467899999976566555443 778777765
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec--
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF-- 256 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-- 256 (427)
+.....+ . .........++++|++..|+.+..
T Consensus 110 ------------------g~~~~~~---------------~-------------~~~~~~P~~i~vd~~~g~lyv~~~~~ 143 (267)
T 1npe_A 110 ------------------GTQRRVL---------------F-------------DTGLVNPRGIVTDPVRGNLYWTDWNR 143 (267)
T ss_dssp ------------------SCSCEEE---------------E-------------CSSCSSEEEEEEETTTTEEEEEECCS
T ss_pred ------------------CCCEEEE---------------E-------------ECCCCCccEEEEeeCCCEEEEEECCC
Confidence 0000000 0 000124567889997777765543
Q ss_pred -CCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCc
Q 014302 257 -DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQG 334 (427)
Q Consensus 257 -dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (427)
.+.|..+++.......+. ........+++++++..|+++......|..++...... . ........
T Consensus 144 ~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~------~-------~~~~~~~~ 210 (267)
T 1npe_A 144 DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR------R-------KVLEGLQY 210 (267)
T ss_dssp SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE------E-------EEEECCCS
T ss_pred CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce------E-------EEecCCCC
Confidence 367888887643332222 23346789999999998888877777787777653210 0 00111123
Q ss_pred eeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccC
Q 014302 335 IEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDK 398 (427)
Q Consensus 335 i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 398 (427)
...++.+ +.+|.++..++ +.|.++|..+++.+...+.+ ....|..+++.|.
T Consensus 211 P~gi~~d--~~~lyva~~~~-----~~v~~~d~~~g~~~~~i~~g------~~~~p~gi~~~~~ 261 (267)
T 1npe_A 211 PFAVTSY--GKNLYYTDWKT-----NSVIAMDLAISKEMDTFHPH------KQTRLYGITIALS 261 (267)
T ss_dssp EEEEEEE--TTEEEEEETTT-----TEEEEEETTTTEEEEEECCS------SCCCCCCEEEECS
T ss_pred ceEEEEe--CCEEEEEECCC-----CeEEEEeCCCCCceEEEccc------cccccceeeecCc
Confidence 4566654 56666643232 45999999887765333221 1123567777765
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.33 E-value=4.8e-05 Score=66.43 Aligned_cols=200 Identities=11% Similarity=0.070 Sum_probs=113.1
Q ss_pred eeeeEEcCCCCEEEEEeC--CCeEEEEEccCCCCcceeec-cCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCC
Q 014302 102 LQGVSWHQHKHIVAFISG--STQVIVRDYEDSGKDACILT-SDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGN 177 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~--d~~v~vwd~~~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~ 177 (427)
...++|+|++.+.++.+. ++.|++.|+.++ +..... .+.......+++. ++.+..+.. ++.+.++|..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg--~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~---- 94 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTG--KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR---- 94 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTC--CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETT----
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCC--CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECC----
Confidence 478999998754444432 589999999887 222221 1111122344554 435555554 4888899986
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD 257 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 257 (427)
+. ..+..+ ... ... ...+++||+.|+++..+
T Consensus 95 -----t~----------------~v~~~i-----------~~g---------------~~~--g~glt~Dg~~l~vs~gs 125 (266)
T 2iwa_A 95 -----TL----------------SNIKNF-----------THQ---------------MKD--GWGLATDGKILYGSDGT 125 (266)
T ss_dssp -----TT----------------EEEEEE-----------ECC---------------SSS--CCEEEECSSSEEEECSS
T ss_pred -----CC----------------cEEEEE-----------ECC---------------CCC--eEEEEECCCEEEEECCC
Confidence 11 111111 110 001 12355688888877678
Q ss_pred CcEEEEEcCCCCccccc---cCC---CCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccc-----
Q 014302 258 GTFYLWETNTWTSEPWS---STS---GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDI----- 326 (427)
Q Consensus 258 g~v~iwd~~~~~~~~~~---~~~---~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----- 326 (427)
+.|.++|..+.+..... ... .....+.|. +| .++........+.+++..+.... +. +++...
T Consensus 126 ~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~--~~---I~~~g~~~~~~ 198 (266)
T 2iwa_A 126 SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLL--GW---ILLPNLRKKLI 198 (266)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEE--EE---EECHHHHHHHH
T ss_pred CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEE--EE---EECCCcccccc
Confidence 89999999887764332 111 235677887 66 45555555668888887764210 00 000000
Q ss_pred -eeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 327 -VSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 327 -~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
.........+.++|+|+++.|.++ +... .+|++.++...
T Consensus 199 ~~~~~~~~v~nGIa~~~~~~~lfVT--gk~~---~~v~~i~l~~~ 238 (266)
T 2iwa_A 199 DEGFRDIDVLNGIAWDQENKRIFVT--GKLW---PKLFEIKLHLV 238 (266)
T ss_dssp HTTCTTCCCEEEEEEETTTTEEEEE--ETTC---SEEEEEEEEEC
T ss_pred cccccccCceEEEEEcCCCCEEEEE--CCCC---CeEEEEEEecc
Confidence 000011256899999999998886 3333 45888777543
No 231
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.33 E-value=5.9e-05 Score=76.87 Aligned_cols=60 Identities=18% Similarity=0.177 Sum_probs=39.6
Q ss_pred ceeeeEEc-CCCCEEEEEeC-C----CeEEEEEccCC-CCcceeeccCCcCCeeEEEEccCCCceEEEecC
Q 014302 101 DLQGVSWH-QHKHIVAFISG-S----TQVIVRDYEDS-GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK 164 (427)
Q Consensus 101 ~V~~l~~s-p~g~~lat~~~-d----~~v~vwd~~~~-~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~ 164 (427)
.+...+|| |||++||.+.. + .+|+++|+.++ ..... .......+++|+|||+.++.+..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~----~~~~~~~~~~WspDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD----KVSGTNGEIVWGPDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC----CEEEECSCCEECSSTTEEEEEEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc----cccCceeeEEEecCCCEEEEEEEC
Confidence 46788999 99999987643 2 25888888765 31111 111224578999999777766654
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.32 E-value=2.2e-05 Score=75.81 Aligned_cols=221 Identities=10% Similarity=0.059 Sum_probs=124.8
Q ss_pred CCCCEEEEEeC-CCeEEEEEccCCCCccee-eccCCcCCeeEEEE-c-cCCCceEEEec------------------CCe
Q 014302 109 QHKHIVAFISG-STQVIVRDYEDSGKDACI-LTSDSQRDVKVLEW-R-PNGGRSLSVGC------------------KGG 166 (427)
Q Consensus 109 p~g~~lat~~~-d~~v~vwd~~~~~~~~~~-~~~~~~~~v~~l~~-s-p~~~~~la~g~------------------~~~ 166 (427)
+||++|.+... +..|.+-|+... +... +.-........+++ + |++.++++.+. ++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~--~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVM--KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTT--EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCc--eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 48887776654 567999888877 2222 12223345778888 4 89966655531 134
Q ss_pred EEEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCce-------EEec-c--
Q 014302 167 ICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTP-------IRRG-F-- 236 (427)
Q Consensus 167 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~-------~~~~-~-- 236 (427)
+.+.|.+ .......+.-. .....++.+|||+++..... +... .
T Consensus 177 vtvID~~-------------------------t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~ 229 (595)
T 1fwx_A 177 FTAVDAD-------------------------KWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAE 229 (595)
T ss_dssp EEEEETT-------------------------TTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCS
T ss_pred EEEEECC-------------------------CCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccc
Confidence 5566654 11222222211 12356677788776431110 0000 0
Q ss_pred -CCeEEEE------EccCCCEEEEEecCCcEEEEEcCC--CCc-cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeee
Q 014302 237 -GGLSILK------WSPTGDYFFAAKFDGTFYLWETNT--WTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIH 306 (427)
Q Consensus 237 -~~v~~~~------~sp~g~~l~~~~~dg~v~iwd~~~--~~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~ 306 (427)
..+..+. +.++|+++.. +.|.+.|.++ ++. ...........++.++|||++++++......+.+++
T Consensus 230 ~d~v~V~~~~~~~~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid 305 (595)
T 1fwx_A 230 MDHIVVFNIAEIEKAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLD 305 (595)
T ss_dssp EEEEEEEEHHHHHHHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEE
T ss_pred cceEEEeeccceeEeccCCCeeEE----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEE
Confidence 0111111 3457766554 5599999987 433 223334456678999999999999888888888888
Q ss_pred eCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 307 FASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
+......+++...+. ..-......+.....++|+|+| ++.++..-+ +.|.+||+..
T Consensus 306 ~~~~~~~~~~~l~~~-~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ld-----sqV~kwdi~~ 361 (595)
T 1fwx_A 306 VTRFDAVFYENADPR-SAVVAEPELGLGPLHTAFDGRG-NAYTSLFLD-----SQVVKWNIED 361 (595)
T ss_dssp GGGHHHHHHSCCCGG-GGEEECCBCCSCEEEEEECTTS-EEEEEETTT-----TEEEEEEHHH
T ss_pred CcccccccccccCcc-cceEEEcCCCCCcceEEECCCC-eEEEEEecC-----CcEEEEEhhH
Confidence 875311111111100 0001123344578999999999 666643333 4599999977
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.20 E-value=3e-05 Score=74.88 Aligned_cols=155 Identities=13% Similarity=0.093 Sum_probs=91.2
Q ss_pred CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCce--------------eeeeeeCC-------CCCCcc
Q 014302 257 DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLT--------------LGSIHFAS-------KPPSLD 315 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~--------------i~~~~~~~-------~~~~~~ 315 (427)
++.+.+.|..+.+......-.+....++.+|||+++++++.+... +.+++... .....-
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 457899999887664333222356778899999999988766522 22222111 000011
Q ss_pred cccccccccc------ceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE---EEeeeeee-eCCC
Q 014302 316 AHLLPVDLPD------IVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI---SLSLIGFI-RGPG 385 (427)
Q Consensus 316 ~~~~~~~~~~------~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~---~~~~~~~~-~~~~ 385 (427)
+....++... ...+..+.....+.++|||++++++..++ .+|.++|+.+.+.. .+.+...+ .-..
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-----~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS-----PTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS-----SBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC-----CeEEEEECcccccccccccCcccceEEEcC
Confidence 1222223332 12333445678899999999999974333 35999999865310 01111111 1112
Q ss_pred CCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 386 DNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 386 ~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
....|..++|.|+ |.+..+.+-+++|..|++
T Consensus 329 vG~gP~h~aF~~d---G~aY~t~~ldsqV~kwdi 359 (595)
T 1fwx_A 329 LGLGPLHTAFDGR---GNAYTSLFLDSQVVKWNI 359 (595)
T ss_dssp CCSCEEEEEECTT---SEEEEEETTTTEEEEEEH
T ss_pred CCCCcceEEECCC---CeEEEEEecCCcEEEEEh
Confidence 2234889999996 567778888999988873
No 234
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.19 E-value=0.0016 Score=58.45 Aligned_cols=228 Identities=13% Similarity=0.085 Sum_probs=119.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCe--EEEEeccCCCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGG--ICIWAPSYPGN 177 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~--i~iw~~~~~~~ 177 (427)
....++|+++|+++++-..++.|..||.+.. ..... ........+++.++|. ++++. ..+. +..++..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~--~~~~~--~~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~---- 103 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHA--TVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKS---- 103 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEE--ECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECT----
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc--eEEEE--eCCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCC----
Confidence 3578999999987777667889888876543 22221 2234688999999994 55444 2333 4344433
Q ss_pred ccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC
Q 014302 178 AASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD 257 (427)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d 257 (427)
.+ ....+. -.+.+ .....++..+++..+++...+
T Consensus 104 -----~g--------------~~~~~~--------------~~~~~-------------~~~~g~~~~~~~~~~v~d~~~ 137 (306)
T 2p4o_A 104 -----DG--------------TVETLL--------------TLPDA-------------IFLNGITPLSDTQYLTADSYR 137 (306)
T ss_dssp -----TS--------------CEEEEE--------------ECTTC-------------SCEEEEEESSSSEEEEEETTT
T ss_pred -----CC--------------eEEEEE--------------eCCCc-------------cccCcccccCCCcEEEEECCC
Confidence 11 111000 00110 011122333444333344457
Q ss_pred CcEEEEEcCCCCccc-----------cccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccc
Q 014302 258 GTFYLWETNTWTSEP-----------WSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDI 326 (427)
Q Consensus 258 g~v~iwd~~~~~~~~-----------~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
+.|+.+|...++... ....-.....+ +|++++|+++......|+.+++... ..+.. .
T Consensus 138 g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~-g~~~~---------~ 205 (306)
T 2p4o_A 138 GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST-DKPGE---------P 205 (306)
T ss_dssp TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT-SCBCC---------C
T ss_pred CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC-CCCCc---------c
Confidence 788888876432110 00111234445 8899988888777778888887642 11100 0
Q ss_pred eeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEec---cCCCCCc
Q 014302 327 VSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFH---DKFKQGP 403 (427)
Q Consensus 327 ~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~---~~~~~g~ 403 (427)
..+........++++++|+++++ .... +.|.+++.. +....+. .+.. ....+.+++|. |+ +.
T Consensus 206 ~~~~~~~~P~gi~vd~dG~l~va---~~~~---~~V~~~~~~-G~~~~~~---~~~~--~~~~p~~~a~~g~~~d---~~ 270 (306)
T 2p4o_A 206 EIFVEQTNIDDFAFDVEGNLYGA---THIY---NSVVRIAPD-RSTTIIA---QAEQ--GVIGSTAVAFGQTEGD---CT 270 (306)
T ss_dssp EEEEESCCCSSEEEBTTCCEEEE---CBTT---CCEEEECTT-CCEEEEE---CGGG--TCTTEEEEEECCSTTT---TT
T ss_pred EEEeccCCCCCeEECCCCCEEEE---eCCC---CeEEEECCC-CCEEEEe---eccc--ccCCceEEEEecccCC---CC
Confidence 00111125678999999987655 2222 349999865 4442211 1111 12347789997 43 44
Q ss_pred eeEEEee
Q 014302 404 LLSVCWS 410 (427)
Q Consensus 404 ~l~v~~~ 410 (427)
.|-|...
T Consensus 271 ~LyVt~~ 277 (306)
T 2p4o_A 271 AIYVVTN 277 (306)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 4555544
No 235
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.14 E-value=0.0015 Score=61.68 Aligned_cols=257 Identities=11% Similarity=0.122 Sum_probs=133.7
Q ss_pred ceeeeEEcCC--CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCC---eEEEEeccCC
Q 014302 101 DLQGVSWHQH--KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKG---GICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp~--g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~---~i~iw~~~~~ 175 (427)
....|+|+|+ +..|..+...+.|+.++...+ ....+ .........++|+++|. ++++...+ ...++.+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g--~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~-- 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ--YVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT-- 213 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTT--EEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC--
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCC--EEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE--
Confidence 4578999995 444555543378888887655 23222 23344688999999995 55554322 11122221
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc-CCCEEEEE
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP-TGDYFFAA 254 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp-~g~~l~~~ 254 (427)
+++.+.. ...+. .......++++| +|...++-
T Consensus 214 ---------------------------------------------~~~~~~~-~~~~~-~~~~P~giavd~~~G~lyv~d 246 (433)
T 4hw6_A 214 ---------------------------------------------RASGFTE-RLSLC-NARGAKTCAVHPQNGKIYYTR 246 (433)
T ss_dssp ---------------------------------------------GGGTTCC-EEEEE-ECSSBCCCEECTTTCCEEECB
T ss_pred ---------------------------------------------CCCCeec-ccccc-ccCCCCEEEEeCCCCeEEEEE
Confidence 0000000 00111 122345677888 55544455
Q ss_pred ecCCcEEEEEcCCCCc-cccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCc------ccccccccccc
Q 014302 255 KFDGTFYLWETNTWTS-EPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSL------DAHLLPVDLPD 325 (427)
Q Consensus 255 ~~dg~v~iwd~~~~~~-~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~ 325 (427)
..++.|+.+|..++.. ..+. ........++|+|+|++|+++......|+.+++......+ .+.....-...
T Consensus 247 ~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~d 326 (433)
T 4hw6_A 247 YHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVD 326 (433)
T ss_dssp TTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBC
T ss_pred CCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCC
Confidence 5667888888875554 2221 1222334699999999888877777788887765321111 11100000000
Q ss_pred ce-eeccCCceeEEEE---------CCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEee------eeeeeC-C---C
Q 014302 326 IV-SLTGSQGIEKIAW---------DASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSL------IGFIRG-P---G 385 (427)
Q Consensus 326 ~~-~~~~~~~i~~v~~---------sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~------~~~~~~-~---~ 385 (427)
.. ....-.....+++ +++|.++++ +... +.|+.++. .+.+..+.- .|+..+ . .
T Consensus 327 g~~~~a~~~~P~giav~~n~~y~~dd~~g~lyva---D~~n---~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~ 399 (433)
T 4hw6_A 327 GMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFC---DRDS---HTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQA 399 (433)
T ss_dssp EEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEE---ETTT---TEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTC
T ss_pred CcccceEEcCCccEEEEccccccccCCCCcEEEE---ECCC---CEEEEECC-CCCEEEEEeCCCCCccccCCCcccccc
Confidence 00 0000114678999 777766555 4433 45888874 444433321 122222 1 1
Q ss_pred CCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 386 DNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 386 ~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
.-..|..|++.|. .|.|+.+-+.+.+|..+++
T Consensus 400 ~~~~P~giavd~~--~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 400 LFNHPTSIAYDMK--RKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp BCSSEEEEEEETT--TTEEEEEEGGGTEEEEEEE
T ss_pred EeCCCcEEEEECC--CCEEEEEeCCCCEEEEEec
Confidence 1234667888743 3666666666777777653
No 236
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.13 E-value=0.00096 Score=63.05 Aligned_cols=156 Identities=11% Similarity=0.183 Sum_probs=92.9
Q ss_pred ceeeeEEcC-CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-C---eEEEEeccCC
Q 014302 101 DLQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-G---GICIWAPSYP 175 (427)
Q Consensus 101 ~V~~l~~sp-~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~---~i~iw~~~~~ 175 (427)
....|+|+| ++..|.++...+.|+.+|++.. ....+. ........++|+++++.++++... + ...+|...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~--~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-- 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE--YVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-- 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT--EEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG--
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC--EEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC--
Confidence 457899998 4555655555478888887665 222222 234567899999999545555432 1 11222221
Q ss_pred CCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEcc-CCCEEEEE
Q 014302 176 GNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSP-TGDYFFAA 254 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp-~g~~l~~~ 254 (427)
+|.+... ..+. .......++++| +|..+++-
T Consensus 213 ----------------------------------------------~g~~~~~-~~l~-~~~~p~giavdp~~g~lyv~d 244 (430)
T 3tc9_A 213 ----------------------------------------------ESGFKVI-TELT-KGQNCNGAETHPINGELYFNS 244 (430)
T ss_dssp ----------------------------------------------GGTSCSE-EEEE-ECSSCCCEEECTTTCCEEEEE
T ss_pred ----------------------------------------------CCceeee-eeec-cCCCceEEEEeCCCCEEEEEE
Confidence 0000000 0011 122455678899 56555565
Q ss_pred ecCCcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 255 KFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 255 ~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
..++.|+.++........+. ........++|+|+|++|+++......|+.++...
T Consensus 245 ~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 245 WNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 56788999998765442222 22345678999999998887777777888877654
No 237
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.06 E-value=0.0067 Score=55.46 Aligned_cols=233 Identities=10% Similarity=0.034 Sum_probs=133.5
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccc
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAAS 180 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~ 180 (427)
.+|.+..++ .+|+.+ ....|+..+++.. ....+... ......++|.+....++.+-.. +.|..++.+
T Consensus 36 ~~C~~~~~~-~~ll~~-~~~~I~~i~~~g~--~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~------- 103 (349)
T 3v64_C 36 RSCKALGPE-PVLLFA-NRIDIRQVLPHRS--EYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLN------- 103 (349)
T ss_dssp SCEEESSSC-CEEEEE-CBSCEEEECTTSC--CEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETT-------
T ss_pred CcccccccC-ceeEee-cccceEEEeCCCC--eeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecC-------
Confidence 345555563 345444 3445766665544 23333333 3457899999877566665543 667777665
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCc
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGT 259 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~ 259 (427)
.+ ....+ +.........+++.+.+..|+ +-...+.
T Consensus 104 --g~--------------~~~~~----------------------------~~~~~~~p~glavd~~~g~ly~~d~~~~~ 139 (349)
T 3v64_C 104 --GS--------------NVEEV----------------------------VSTGLESPGGLAVDWVHDKLYWTDSGTSR 139 (349)
T ss_dssp --SC--------------SCEEE----------------------------ECSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred --CC--------------CceEE----------------------------EeCCCCCccEEEEecCCCeEEEEcCCCCe
Confidence 00 00000 000112345678887666666 5555678
Q ss_pred EEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCccccccccccccceeeccCCceeE
Q 014302 260 FYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEK 337 (427)
Q Consensus 260 v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 337 (427)
|.+.++.......+. ........+++.|.+..|+.+.... ..|+.+++....... . + ...-...+.
T Consensus 140 I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~--~-------~~~~~~PnG 207 (349)
T 3v64_C 140 IEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---I--A-------DTHLFWPNG 207 (349)
T ss_dssp EEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---S--C-------CSSCSCEEE
T ss_pred EEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE---E--E-------ECCCCCcce
Confidence 999988755433332 3345678999999888887776555 567776655431100 0 0 001125689
Q ss_pred EEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEE
Q 014302 338 IAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTY 417 (427)
Q Consensus 338 v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~ 417 (427)
++|+|++..|.++ +... +.|..+++.......+ +... ...|..+++. .+.+..+-|..++|..+
T Consensus 208 la~d~~~~~lY~a--D~~~---~~I~~~~~dG~~~~~~-----~~~~--~~~P~giav~----~~~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 208 LTIDYAGRRMYWV--DAKH---HVIERANLDGSHRKAV-----ISQG--LPHPFAITVF----EDSLYWTDWHTKSINSA 271 (349)
T ss_dssp EEEETTTTEEEEE--ETTT---TEEEEEETTSCSCEEE-----ECSS--CSSEEEEEEE----TTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCEEEEE--ECCC---CEEEEEeCCCCceEEE-----EeCC--CCCceEEEEE----CCEEEEecCCCCeEEEE
Confidence 9999988888775 4333 5699999865433222 1111 2235666662 25677777788888777
Q ss_pred e
Q 014302 418 P 418 (427)
Q Consensus 418 ~ 418 (427)
+
T Consensus 272 ~ 272 (349)
T 3v64_C 272 N 272 (349)
T ss_dssp E
T ss_pred E
Confidence 5
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.05 E-value=0.00033 Score=60.51 Aligned_cols=184 Identities=12% Similarity=0.099 Sum_probs=101.9
Q ss_pred eeeeEEcCCCCEEEEEeCCC--eEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 102 LQGVSWHQHKHIVAFISGST--QVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
...+.|+ ++.+..+.+.+| .|+++|+.++ +..... ............++++++..... ++.+.++|.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg--kv~~~~-~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~----- 115 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESG--KTLQQI-ELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR----- 115 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTC--CEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-----
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCC--cEEEEE-ecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc-----
Confidence 4788898 676666666655 8999998887 222221 11223333333344545555543 4888899986
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDG 258 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg 258 (427)
+. ..+..+. .. . ....+++|++.|+.+..++
T Consensus 116 ----t~----------------~~~~ti~-----------~~---------------~---eG~glt~dg~~L~~SdGs~ 146 (262)
T 3nol_A 116 ----NL----------------RQVRSFN-----------YD---------------G---EGWGLTHNDQYLIMSDGTP 146 (262)
T ss_dssp ----TC----------------CEEEEEE-----------CS---------------S---CCCCEEECSSCEEECCSSS
T ss_pred ----cC----------------cEEEEEE-----------CC---------------C---CceEEecCCCEEEEECCCC
Confidence 11 1121111 10 0 1122346788888666678
Q ss_pred cEEEEEcCCCCccccc---cCC---CCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccce-----
Q 014302 259 TFYLWETNTWTSEPWS---STS---GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIV----- 327 (427)
Q Consensus 259 ~v~iwd~~~~~~~~~~---~~~---~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----- 327 (427)
.|.++|..+.+..... ... ..+..+.|. +|+ |.........|.+++..+... .+. +++....
T Consensus 147 ~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V--~~~---Id~~~L~~~~~~ 219 (262)
T 3nol_A 147 VLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKV--TGI---IDLNGILAEAGP 219 (262)
T ss_dssp EEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBE--EEE---EECTTGGGGSCS
T ss_pred eEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcE--EEE---EECCcCcccccc
Confidence 8999999988764332 112 334457776 675 445555555777777655421 000 0110000
Q ss_pred eeccCCceeEEEECCCCCEEEEE
Q 014302 328 SLTGSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 328 ~~~~~~~i~~v~~sp~g~~La~~ 350 (427)
......-.+.+||+|+++.|.++
T Consensus 220 ~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 220 LPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp CCSSCCCEEEEEEETTTTEEEEE
T ss_pred ccCcCCceEEEEEcCCCCEEEEE
Confidence 01112356899999999998886
No 239
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.04 E-value=0.0029 Score=58.78 Aligned_cols=232 Identities=10% Similarity=0.037 Sum_probs=131.9
Q ss_pred eeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCcccc
Q 014302 103 QGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASV 181 (427)
Q Consensus 103 ~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~ 181 (427)
+|.+..+ ..+|+.+ ....|+..+++.. ....+... ......++|.+.+..++.+-.. +.|..++.+
T Consensus 80 ~C~~~~~-~~~l~~~-~~~~I~~i~~~~~--~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~-------- 146 (386)
T 3v65_B 80 SCKALGP-EPVLLFA-NRIDIRQVLPHRS--EYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLN-------- 146 (386)
T ss_dssp CEEECSS-CCEEEEE-CBSCEEEECTTSC--CCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETT--------
T ss_pred eECCccc-cceeEee-cCccceeeccCCC--cEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecC--------
Confidence 3444445 3345444 3456777666654 23333333 3457899999876566665543 667777765
Q ss_pred ccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCcE
Q 014302 182 RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGTF 260 (427)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~v 260 (427)
+.....+ +. ........+++.+.+..|+ +-...+.|
T Consensus 147 ---------------g~~~~~~--~~--------------------------~~~~~p~glavd~~~g~lY~~d~~~~~I 183 (386)
T 3v65_B 147 ---------------GSNVEEV--VS--------------------------TGLESPGGLAVDWVHDKLYWTDSGTSRI 183 (386)
T ss_dssp ---------------SCCEEEE--EC--------------------------SSCSCCCCEEEETTTTEEEEEETTTTEE
T ss_pred ---------------CCCcEEE--Ee--------------------------CCCCCccEEEEEeCCCeEEEEcCCCCeE
Confidence 0000000 00 0011234577777666666 55556778
Q ss_pred EEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCccccccccccccceeeccCCceeEE
Q 014302 261 YLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKI 338 (427)
Q Consensus 261 ~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 338 (427)
.+.++.......+. ........+++.|.+..|+.+.... ..|+.+.+....... .. ...-...+.|
T Consensus 184 ~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~---------~~~~~~PnGl 251 (386)
T 3v65_B 184 EVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IA---------DTHLFWPNGL 251 (386)
T ss_dssp EECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EE---------CSSCSCEEEE
T ss_pred EEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE---EE---------ECCCCCeeeE
Confidence 88887654433332 3335678999999888887766555 567666654431100 00 0011256899
Q ss_pred EECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 339 AWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 339 ~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
+|+|++..|.++ +... +.|..+++.......+. ... ...|..+++. .+.+..+.|..++|..++
T Consensus 252 avd~~~~~lY~a--D~~~---~~I~~~d~dG~~~~~~~-----~~~--~~~P~giav~----~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 252 TIDYAGRRMYWV--DAKH---HVIERANLDGSHRKAVI-----SQG--LPHPFAITVF----EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEGGGTEEEEE--ETTT---TEEEEECTTSCSCEEEE-----CSS--CSSEEEEEEE----TTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCEEEEE--ECCC---CEEEEEeCCCCeeEEEE-----ECC--CCCceEEEEE----CCEEEEeeCCCCeEEEEE
Confidence 999988888775 4433 56999988654332221 111 2236667762 256777788888888776
No 240
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.01 E-value=0.0073 Score=54.36 Aligned_cols=230 Identities=12% Similarity=0.030 Sum_probs=130.6
Q ss_pred EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCccccccc
Q 014302 113 IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLGA 191 (427)
Q Consensus 113 ~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~~~~~ 191 (427)
+|+.+. ...|+..+++.. ....+.. .......++|.+.+..++.+... +.|..++++ ..
T Consensus 3 ~ll~~~-~~~I~~i~~~~~--~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~---------g~------- 62 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRS--EYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLD---------RA------- 62 (316)
T ss_dssp EEEEEC-BSSEEEEETTSC--CCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------
T ss_pred EEEEEC-CCeEEEEECCCc--ceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECC---------CC-------
Confidence 455543 456888887765 2222222 23467899999877566666544 777777765 00
Q ss_pred ccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCcEEEEEcCCCCc
Q 014302 192 LSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGTFYLWETNTWTS 270 (427)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~ 270 (427)
. . ...... .+.........+++++.+..|+ +-...+.|.++|+.....
T Consensus 63 -------~-------~---~~~~~~--------------~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~ 111 (316)
T 1ijq_A 63 -------H-------G---VSSYDT--------------VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 111 (316)
T ss_dssp ----------------------CEE--------------EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred -------C-------C---CcccEE--------------EEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce
Confidence 0 0 000000 0000112345788887666666 555678899999875443
Q ss_pred cccc-cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEE
Q 014302 271 EPWS-STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLA 348 (427)
Q Consensus 271 ~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La 348 (427)
..+. ........+++.|.+..|+.+.... +.|..+++....... .. ...-...+.++|+|++..|.
T Consensus 112 ~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~---~~---------~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 112 KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LV---------TENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE---EE---------CSSCSCEEEEEEETTTTEEE
T ss_pred EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE---EE---------ECCCCCceEEEEeccCCEEE
Confidence 3333 2345678999999877777665443 466666554321000 00 00112578999999988887
Q ss_pred EEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 349 VSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 349 ~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
++ +... +.|..+|+.......+ +........|..+++. .+.+..+-|..++|..++.
T Consensus 180 ~~--D~~~---~~I~~~d~dg~~~~~~-----~~~~~~~~~P~giav~----~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 180 WV--DSKL---HSISSIDVNGGNRKTI-----LEDEKRLAHPFSLAVF----EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp EE--ETTT---TEEEEEETTSCSCEEE-----EECTTTTSSEEEEEEE----TTEEEEEETTTTEEEEEET
T ss_pred EE--ECCC---CeEEEEecCCCceEEE-----eecCCccCCcEEEEEE----CCEEEEEECCCCeEEEEeC
Confidence 75 4333 5699999875433211 1221222346677763 2567777788888888764
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.98 E-value=3.4e-06 Score=78.35 Aligned_cols=142 Identities=8% Similarity=0.007 Sum_probs=61.0
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEE-ecCCeEEEEeccCCCCccccccCcccc
Q 014302 110 HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSV-GCKGGICIWAPSYPGNAASVRSGAASF 188 (427)
Q Consensus 110 ~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~-g~~~~i~iw~~~~~~~~~~~~~~~~~~ 188 (427)
++..|++++.|+.|+.||..++ +..-... . ..+.+..+..++ .++++ +.++.+..||.. ++
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG--~~~W~~~-~-~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~---------tG---- 69 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG--SIKWTLK-E-DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSK---------NN---- 69 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC--CEEEEEE-C-CCSCCCC------CCEEECTTTCCEEEC------------------
T ss_pred eCCEEEEEcCCCEEEEEECCCC--CEEEEec-C-CCceecceEcCC-CEEEEeCCCCEEEEEECC---------CC----
Confidence 5678999999999999998877 2221111 2 445555566676 45555 466889999986 11
Q ss_pred cccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCC
Q 014302 189 LGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTW 268 (427)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~ 268 (427)
...+. ...+ . .... ...++ +. ++..|++++.++.|+.||.+++
T Consensus 70 --------~~~w~----~~~~-~-----------------~~~~--~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG 112 (369)
T 2hz6_A 70 --------EGLTK----LPFT-I-----------------PELV--QASPC----RS-SDGILYMGKKQDIWYVIDLLTG 112 (369)
T ss_dssp --------CCSEE----CSCC-H-----------------HHHH--TTCSC----C------CCCCEEEEEEEEECCC--
T ss_pred --------ceeee----eecc-C-----------------cccc--ccCce----Ee-cCCEEEEEeCCCEEEEEECCCC
Confidence 00000 0000 0 0000 00011 01 2345667778899999999988
Q ss_pred CccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCC
Q 014302 269 TSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 310 (427)
Q Consensus 269 ~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~ 310 (427)
+......... ...++|++..+++++. ++.++.|+..+.
T Consensus 113 ~~~w~~~~~~---~~~~~p~~~~v~~~~~-dg~v~a~d~~tG 150 (369)
T 2hz6_A 113 EKQQTLSSAF---ADSLSPSTSLLYLGRT-EYTITMYDTKTR 150 (369)
T ss_dssp -----------------------EEEEEE-EEEEECCCSSSS
T ss_pred cEEEEecCCC---cccccccCCEEEEEec-CCEEEEEECCCC
Confidence 7643221111 2345677888877654 346666666554
No 242
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.94 E-value=0.00058 Score=59.00 Aligned_cols=187 Identities=12% Similarity=0.047 Sum_probs=102.8
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCccc
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNAAS 180 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~~~ 180 (427)
...+.|+ ++.+..+.+.++.|+++|+.++...... . ..........++++++..... ++.+.++|.+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~------- 124 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTWTEGLLFTWSGM------- 124 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEESSSCEEEEEETT-------
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEccCCEEEEEECC-------
Confidence 4678887 3566667777889999998887322222 2 223333223345545555543 4888899987
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTF 260 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v 260 (427)
....+..+. ..+ .-+.+ ++|++.|+.+..++.|
T Consensus 125 ------------------Tl~~~~ti~-----------~~~----------------eGwGL--t~Dg~~L~vSdGs~~l 157 (268)
T 3nok_A 125 ------------------PPQRERTTR-----------YSG----------------EGWGL--CYWNGKLVRSDGGTML 157 (268)
T ss_dssp ------------------TTEEEEEEE-----------CSS----------------CCCCE--EEETTEEEEECSSSEE
T ss_pred ------------------cCcEEEEEe-----------CCC----------------ceeEE--ecCCCEEEEECCCCEE
Confidence 112222111 111 11222 3678888877778999
Q ss_pred EEEEcCCCCccccc---cCC---CCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--CccccccccccccceeeccC
Q 014302 261 YLWETNTWTSEPWS---STS---GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAHLLPVDLPDIVSLTGS 332 (427)
Q Consensus 261 ~iwd~~~~~~~~~~---~~~---~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 332 (427)
.++|..+.+..... ... ..+..+.|. +|+ |.........|.+++..+... .++-....-... .......
T Consensus 158 ~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~-~~~~~~~ 234 (268)
T 3nok_A 158 TFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVA-GQVTNPE 234 (268)
T ss_dssp EEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHT-TTCCCTT
T ss_pred EEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEECCCCccccc-ccccCcC
Confidence 99999988764332 221 244567777 675 545555555777777655421 111000000000 0001112
Q ss_pred CceeEEEECCCCCEEEEE
Q 014302 333 QGIEKIAWDASGERLAVS 350 (427)
Q Consensus 333 ~~i~~v~~sp~g~~La~~ 350 (427)
.-.+.+||+|+++.|.++
T Consensus 235 ~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 235 AVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp CCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEcCCCCEEEEe
Confidence 356899999988888775
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.82 E-value=0.02 Score=53.39 Aligned_cols=229 Identities=13% Similarity=0.029 Sum_probs=130.7
Q ss_pred EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCccccccc
Q 014302 113 IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLGA 191 (427)
Q Consensus 113 ~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~~~~~ 191 (427)
+|+.+. ...|+..+++.. ....+. .....+..++|.+.+..++.+-.. +.|..++++ ..
T Consensus 85 ~ll~~~-~~~I~~i~l~~~--~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~---------g~------- 144 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRS--EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLD---------RA------- 144 (400)
T ss_dssp EEEEEE-TTEEEEECTTSC--SCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-------------------
T ss_pred eeEEec-cceeEEEccCCc--ceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcc---------cC-------
Confidence 555553 467888777655 222232 334578899999876566655443 667777665 00
Q ss_pred ccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCcEEEEEcCCCCc
Q 014302 192 LSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGTFYLWETNTWTS 270 (427)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~ 270 (427)
. . ..... ..+.........+++.+.+..|+ +-...+.|.+.++.....
T Consensus 145 -------~--~--------~~~~~--------------~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~ 193 (400)
T 3p5b_L 145 -------H--G--------VSSYD--------------TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 193 (400)
T ss_dssp --------------------CCCE--------------EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE
T ss_pred -------C--C--------CCcce--------------EEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce
Confidence 0 0 00000 00111123456788887666666 555677898888876554
Q ss_pred cccc-cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEE
Q 014302 271 EPWS-STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLA 348 (427)
Q Consensus 271 ~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La 348 (427)
..+. ........+++.|.+.+|+.+.... ..|+.+.+....... .. ...-...+.|++++++..|.
T Consensus 194 ~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~---~~---------~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 194 KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LV---------TENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE---EE---------CSSCSCEEEEEEETTTTEEE
T ss_pred EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE---EE---------ECCCCceEEEEEEeCCCEEE
Confidence 3333 3445578999999877777665432 456666554431100 00 00112678999999988888
Q ss_pred EEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 349 VSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 349 ~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
++ +... +.|..+|+.......+ +........|..++.. .+.+..+-|..++|..++
T Consensus 262 ~a--D~~~---~~I~~~d~dG~~~~~~-----~~~~~~l~~P~gl~v~----~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 262 WV--DSKL---HSISSIDVNGGNRKTI-----LEDEKRLAHPFSLAVF----EDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EE--ETTT---TEEEEEETTSCCCEEE-----EECSSTTSSEEEEEEE----TTEEEEEESSSCSEEEEE
T ss_pred EE--ECCC---CEEEEEeCCCCccEEE-----EeCCCCCCCCEEEEEe----CCEEEEecCCCCeEEEEE
Confidence 85 4333 5699999876443322 2222223346666663 245777777888887776
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.79 E-value=0.00052 Score=69.92 Aligned_cols=119 Identities=11% Similarity=0.092 Sum_probs=72.4
Q ss_pred eEEEEEc-cCCCEEE-EEecCC----cEEEEEcCCC-CccccccCCCCeeEEEECCCCCEEEEEEcCC----ceeeeeee
Q 014302 239 LSILKWS-PTGDYFF-AAKFDG----TFYLWETNTW-TSEPWSSTSGFVTGATWDPEGRMILLAFAGS----LTLGSIHF 307 (427)
Q Consensus 239 v~~~~~s-p~g~~l~-~~~~dg----~v~iwd~~~~-~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~----~~i~~~~~ 307 (427)
+...+|| |||++|| +...+| .|+++|+.++ +..... .......++|+|||+.|++...+. ..|+.+++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 5567899 9999888 444333 4999999887 531110 111245789999999998876543 24555555
Q ss_pred CCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccC
Q 014302 308 ASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRT 370 (427)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~ 370 (427)
...... . .. ............+.|||||++|+........ ..|+++|+.++
T Consensus 255 gt~~~~--~-~l------v~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~~l~~~d~~~~ 305 (751)
T 2xe4_A 255 GKLQSE--D-VC------LYEEHNPLFSAFMYKAADTNTLCIGSQSPET---AEVHLLDLRKG 305 (751)
T ss_dssp TSCGGG--C-EE------EEECCCTTCEEEEEECTTSSEEEEEEECSSC---EEEEEEESSSC
T ss_pred CCCchh--c-EE------EEecCCCceEEEEEECCCCCEEEEEecCCCC---ceEEEEECCCC
Confidence 432100 0 00 0000111235678999999999986543332 56999999765
No 245
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.032 Score=53.13 Aligned_cols=72 Identities=7% Similarity=0.067 Sum_probs=49.3
Q ss_pred CeEEEEEccCCCEEE-EEecCCcEEEEEcC-------CCCc------c------ccc--cCCCCeeEEEECCCCCEEEEE
Q 014302 238 GLSILKWSPTGDYFF-AAKFDGTFYLWETN-------TWTS------E------PWS--STSGFVTGATWDPEGRMILLA 295 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~-------~~~~------~------~~~--~~~~~v~~v~~spdg~~l~~~ 295 (427)
....++++|++.+|+ +-..++.|..+|+. ++.. . .+. ........++|+|+|++|+++
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 345678899666666 55567789999987 4443 0 111 233456789999999987777
Q ss_pred EcCCceeeeeeeCC
Q 014302 296 FAGSLTLGSIHFAS 309 (427)
Q Consensus 296 ~~~~~~i~~~~~~~ 309 (427)
......|+.++...
T Consensus 328 D~~~h~I~kid~dg 341 (496)
T 3kya_A 328 VINNHYFMRSDYDE 341 (496)
T ss_dssp ETTTTEEEEEEEET
T ss_pred eCCCCEEEEEecCC
Confidence 77766788776654
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.62 E-value=0.0097 Score=50.83 Aligned_cols=187 Identities=14% Similarity=0.091 Sum_probs=99.4
Q ss_pred eeeeEEcCCCCEEEEEeCC--CeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 102 LQGVSWHQHKHIVAFISGS--TQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d--~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
+..+.|++ +.+..+.+.+ ..|+++|+.++ +..... ............++++++..... ++.+.++|.+
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tg--kv~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~----- 93 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETG--RILQRA-EVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA----- 93 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTC--CEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-----
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCC--CEEEEE-eCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-----
Confidence 56888987 5555555554 48999999887 222221 11222322223334445555543 4888899986
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDG 258 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg 258 (427)
....+..+... . .-+.+ .++++.|+.+..++
T Consensus 94 --------------------tl~~~~ti~~~--------------------------~-~Gwgl--t~dg~~L~vSdgs~ 124 (243)
T 3mbr_X 94 --------------------TLTPRARFRYP--------------------------G-EGWAL--TSDDSHLYMSDGTA 124 (243)
T ss_dssp --------------------TTEEEEEEECS--------------------------S-CCCEE--EECSSCEEEECSSS
T ss_pred --------------------cCcEEEEEeCC--------------------------C-CceEE--eeCCCEEEEECCCC
Confidence 11222211111 1 11233 35788888766788
Q ss_pred cEEEEEcCCCCccccc---cCC---CCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC--Ccccc-ccccccccceee
Q 014302 259 TFYLWETNTWTSEPWS---STS---GFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP--SLDAH-LLPVDLPDIVSL 329 (427)
Q Consensus 259 ~v~iwd~~~~~~~~~~---~~~---~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~--~~~~~-~~~~~~~~~~~~ 329 (427)
.|.++|..+.+..... .+. ..+..+.|. +|+ |.........|.+++..+... .++-. ..+. ... ...
T Consensus 125 ~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~-~~~-~~~ 200 (243)
T 3mbr_X 125 VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPD-ADA-LTD 200 (243)
T ss_dssp EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTT-TTS-CCC
T ss_pred eEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccc-ccc-ccC
Confidence 9999999988763332 111 344556665 565 444444455666666655321 11000 0000 000 001
Q ss_pred ccCCceeEEEECCCCCEEEEE
Q 014302 330 TGSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 330 ~~~~~i~~v~~sp~g~~La~~ 350 (427)
....-.+.++|+|+++.|.++
T Consensus 201 ~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 201 STNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp TTSSCEEEEEEETTTTEEEEE
T ss_pred CcCCceEEEEEcCCCCEEEEE
Confidence 112356899999999888886
No 247
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.55 E-value=0.034 Score=48.05 Aligned_cols=165 Identities=10% Similarity=0.072 Sum_probs=88.1
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcc--------cc--ccCCCCeeEEEECCCCCEEEEEEcCCc-eeeeee
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSE--------PW--SSTSGFVTGATWDPEGRMILLAFAGSL-TLGSIH 306 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~--------~~--~~~~~~v~~v~~spdg~~l~~~~~~~~-~i~~~~ 306 (427)
....+++.+++.++++.-.++.+.++++...... .. .........++|+|.++.|+++...+. .++.++
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 4556777777766556556677778776554320 00 123455689999999988888776664 555555
Q ss_pred eCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEe-eeeeeeCC-
Q 014302 307 FASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLS-LIGFIRGP- 384 (427)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~-~~~~~~~~- 384 (427)
...... .....+.+.......-..+.+++++|....|.+.+..+ ..|.++|.+.. .+... ...-..+.
T Consensus 151 --g~~~~~--~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s-----~~L~~~d~~g~-~~~~~~L~~g~~~l~ 220 (255)
T 3qqz_A 151 --GLLSSN--ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES-----RALQEVTLVGE-VIGEMSLTKGSRGLS 220 (255)
T ss_dssp --STTCSS--CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT-----TEEEEECTTCC-EEEEEECSTTGGGCS
T ss_pred --ccccCC--ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCC-----CeEEEEcCCCC-EEEEEEcCCccCCcc
Confidence 210000 00000000000000112578999998766666543333 45889998765 33322 22111111
Q ss_pred CCCCCceeEEeccCCCCCceeEEEeeCceEEE
Q 014302 385 GDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCT 416 (427)
Q Consensus 385 ~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~ 416 (427)
.....+-.|+|.++ |.+..|+ ....+..
T Consensus 221 ~~~~qpEGia~d~~---G~lyIvs-E~n~~y~ 248 (255)
T 3qqz_A 221 HNIKQAEGVAMDAS---GNIYIVS-EPNRFYR 248 (255)
T ss_dssp SCCCSEEEEEECTT---CCEEEEE-TTTEEEE
T ss_pred cccCCCCeeEECCC---CCEEEEc-CCceEEE
Confidence 22345668999885 6666664 3334333
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.55 E-value=0.033 Score=51.62 Aligned_cols=201 Identities=9% Similarity=0.012 Sum_probs=114.0
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
.+..++|++.+..|... ...+.|+.++++.. ....+..........+++.+.+..++.+-. .+.|.+.+++ +.
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~--~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d--g~- 191 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGS--NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD--GA- 191 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC--CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT--SC-
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCC--CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC--CC-
Confidence 57889999876655544 45688888887755 222222222234567888876645555443 3666665554 00
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEe-cC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAK-FD 257 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~-~d 257 (427)
....+ +.........++++|.+.+|+... ..
T Consensus 192 --------------------~~~~l----------------------------~~~~l~~P~giavdp~~g~ly~td~~~ 223 (386)
T 3v65_B 192 --------------------HRKVL----------------------------LWQSLEKPRAIALHPMEGTIYWTDWGN 223 (386)
T ss_dssp --------------------SCEEE----------------------------ECSSCSCEEEEEEETTTTEEEEEECSS
T ss_pred --------------------ceEEe----------------------------ecCCCCCCcEEEEEcCCCeEEEeccCC
Confidence 00000 000112456788888877777443 33
Q ss_pred -CcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCce
Q 014302 258 -GTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGI 335 (427)
Q Consensus 258 -g~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 335 (427)
+.|..+++.......+. ..-.....++|+|++..|+.+......|..+++...... ... .......
T Consensus 224 ~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~---~~~---------~~~~~~P 291 (386)
T 3v65_B 224 TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AVI---------SQGLPHP 291 (386)
T ss_dssp SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE---EEE---------CSSCSSE
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE---EEE---------ECCCCCc
Confidence 67888887654433332 334457899999988888888777777777776542110 000 0011255
Q ss_pred eEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 336 EKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 336 ~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
..|++. +..|..+ +... +.|..++..++...
T Consensus 292 ~giav~--~~~ly~t--d~~~---~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 292 FAITVF--EDSLYWT--DWHT---KSINSANKFTGKNQ 322 (386)
T ss_dssp EEEEEE--TTEEEEE--ETTT---TEEEEEETTTCCSC
T ss_pred eEEEEE--CCEEEEe--eCCC---CeEEEEECCCCcce
Confidence 777773 3455554 3332 45888885555443
No 249
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.53 E-value=0.051 Score=49.56 Aligned_cols=200 Identities=9% Similarity=0.010 Sum_probs=115.3
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
.+..++|++.+..|... ...+.|..++++.. ....+..........+++.+.+..++.+-. .+.|.+.+++
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~--~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d----- 146 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGS--NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD----- 146 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCC--CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-----
Confidence 57899999877666554 45688888887765 222222222234577888876646655543 3777777765
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEE-ecC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAA-KFD 257 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~-~~d 257 (427)
+.....+ +.........++++|.+.+|+.. ...
T Consensus 147 ------------------G~~~~~l----------------------------~~~~l~~P~~iavdp~~g~ly~td~~~ 180 (349)
T 3v64_C 147 ------------------GAHRKVL----------------------------LWQSLEKPRAIALHPMEGTIYWTDWGN 180 (349)
T ss_dssp ------------------SCSCEEE----------------------------ECTTCSCEEEEEEETTTTEEEEEECSS
T ss_pred ------------------CCceEEE----------------------------EeCCCCCcceEEEecCcCeEEEeccCC
Confidence 0000000 00011235678899877777744 334
Q ss_pred -CcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCce
Q 014302 258 -GTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGI 335 (427)
Q Consensus 258 -g~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 335 (427)
+.|..+++.......+. ..-.....++|+|++..|+.+......|..+++...... ... ...-...
T Consensus 181 ~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~---~~~---------~~~~~~P 248 (349)
T 3v64_C 181 TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK---AVI---------SQGLPHP 248 (349)
T ss_dssp SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEE---------CSSCSSE
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE---EEE---------eCCCCCc
Confidence 67888887654443332 334467899999999988888777777887776543110 000 0011245
Q ss_pred eEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce
Q 014302 336 EKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL 372 (427)
Q Consensus 336 ~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~ 372 (427)
..+++. +..|..+ +... +.|..++..++..
T Consensus 249 ~giav~--~~~ly~t--d~~~---~~V~~~~~~~G~~ 278 (349)
T 3v64_C 249 FAITVF--EDSLYWT--DWHT---KSINSANKFTGKN 278 (349)
T ss_dssp EEEEEE--TTEEEEE--ETTT---TEEEEEETTTCCS
T ss_pred eEEEEE--CCEEEEe--cCCC---CeEEEEEccCCCc
Confidence 677773 3455554 3322 4577777545443
No 250
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.51 E-value=0.063 Score=54.58 Aligned_cols=155 Identities=10% Similarity=-0.007 Sum_probs=94.5
Q ss_pred CeEEEEEccCCCEEE-EEecCCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCc
Q 014302 238 GLSILKWSPTGDYFF-AAKFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSL 314 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~ 314 (427)
....|++.+.++.|+ +-...+.|.+.++.......+. ........|++.|.+.+|+.+.... ..|....+.......
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 455788888887777 5556788999998755543333 3445678999999877777765443 466666554431100
Q ss_pred cccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEE
Q 014302 315 DAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFS 394 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (427)
.. ...-.....|++++.+..|.++ +... ..|..+++.......+ +........+..|+
T Consensus 552 ---lv---------~~~l~~P~GLavD~~~~~LYwa--D~~~---~~I~~~d~dG~~~~~v-----~~~~~~l~~P~gla 609 (791)
T 3m0c_C 552 ---LV---------TENIQWPNGITLDLLSGRLYWV--DSKL---HSISSIDVNGGNRKTI-----LEDEKRLAHPFSLA 609 (791)
T ss_dssp ---EE---------CSSCSCEEEEEEETTTTEEEEE--ETTT---TEEEEEETTSCSCEEE-----EECTTTTSSEEEEE
T ss_pred ---EE---------eCCCCCceEEEEecCCCeEEEE--eCCC---CcEEEEecCCCceEEE-----ecCCCccCCCCEEE
Confidence 00 0011267899999888888875 3333 4699999866544322 22222233466666
Q ss_pred eccCCCCCceeEEEeeCceEEEEe
Q 014302 395 FHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 395 f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
+.. +.|..+-|..++|..++
T Consensus 610 v~~----~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 610 VFE----DKVFWTDIINEAIFSAN 629 (791)
T ss_dssp EET----TEEEEEETTTTEEEEEE
T ss_pred EeC----CEEEEEECCCCEEEEEe
Confidence 532 35666666667776665
No 251
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=0.0044 Score=58.51 Aligned_cols=157 Identities=15% Similarity=0.136 Sum_probs=93.7
Q ss_pred CCeEEEEEcc-CCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCcee--eeeeeCCCCCC
Q 014302 237 GGLSILKWSP-TGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTL--GSIHFASKPPS 313 (427)
Q Consensus 237 ~~v~~~~~sp-~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i--~~~~~~~~~~~ 313 (427)
.....++++| ++..|+++...+.|+.+|+.......+.........++|+++|++|+++....+.+ .++.+... ..
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 3457889998 56677766655889999988766554445556788999999999777765533211 11111111 00
Q ss_pred ccccccccccccceeeccCCceeEEEECC-CCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCcee
Q 014302 314 LDAHLLPVDLPDIVSLTGSQGIEKIAWDA-SGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVA 392 (427)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~i~~v~~sp-~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (427)
+.. ...+........++++| +|..+++ +... +.|..|+...+....+. .. .....|..
T Consensus 216 ~~~---------~~~l~~~~~p~giavdp~~g~lyv~---d~~~---~~V~~~~~~~~~~~~~~-----~~-~~~~~P~g 274 (430)
T 3tc9_A 216 FKV---------ITELTKGQNCNGAETHPINGELYFN---SWNA---GQVFRYDFTTQETTPLF-----TI-QDSGWEFH 274 (430)
T ss_dssp SCS---------EEEEEECSSCCCEEECTTTCCEEEE---ETTT---TEEEEEETTTTEEEEEE-----EC-SSSSCCEE
T ss_pred eee---------eeeeccCCCceEEEEeCCCCEEEEE---ECCC---CEEEEEECCCCcEEEEE-----Ec-CCCCccee
Confidence 100 00111123568899999 5655544 3333 56999998766542221 11 11234778
Q ss_pred EEeccCCCCCc-eeEEEeeCceEEEEe
Q 014302 393 FSFHDKFKQGP-LLSVCWSSGFCCTYP 418 (427)
Q Consensus 393 ~~f~~~~~~g~-~l~v~~~~g~i~~~~ 418 (427)
++|+|+ |. +..+-...++|..|+
T Consensus 275 ia~~pd---G~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 275 IQFHPS---GNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp EEECTT---SSEEEEEETTTTEEEEEE
T ss_pred EEEcCC---CCEEEEEECCCCEEEEEe
Confidence 999986 55 566666677888775
No 252
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.43 E-value=0.0059 Score=53.16 Aligned_cols=153 Identities=12% Similarity=0.077 Sum_probs=91.9
Q ss_pred eeEEcCCCCEEE-EEeCCCeEEEEEccCCCCccee-eccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcccc
Q 014302 104 GVSWHQHKHIVA-FISGSTQVIVRDYEDSGKDACI-LTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASV 181 (427)
Q Consensus 104 ~l~~sp~g~~la-t~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~ 181 (427)
.++++ +..|. +...++.+.++|..+. +... +..+ .. .....++||++++++-..+.+.++|..
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~--~v~~~i~~g-~~--~g~glt~Dg~~l~vs~gs~~l~viD~~-------- 134 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTL--SNIKNFTHQ-MK--DGWGLATDGKILYGSDGTSILYEIDPH-------- 134 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTT--EEEEEEECC-SS--SCCEEEECSSSEEEECSSSEEEEECTT--------
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCC--cEEEEEECC-CC--CeEEEEECCCEEEEECCCCeEEEEECC--------
Confidence 34444 44444 4456789999998766 2222 2222 11 123466788777766655788888876
Q ss_pred ccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcEE
Q 014302 182 RSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFY 261 (427)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~ 261 (427)
+. .....+.-. ..+ ........+.|. +|+..+....++.|.
T Consensus 135 -t~----------------~v~~~I~Vg-----------~~~----------~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 135 -TF----------------KLIKKHNVK-----------YNG----------HRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp -TC----------------CEEEEEECE-----------ETT----------EECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred -CC----------------cEEEEEEEC-----------CCC----------cccccceeEEEE-CCEEEEecCCCCeEE
Confidence 11 111111100 000 011235567777 664333444578999
Q ss_pred EEEcCCCCccccccC--------------CCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCC
Q 014302 262 LWETNTWTSEPWSST--------------SGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 310 (427)
Q Consensus 262 iwd~~~~~~~~~~~~--------------~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~ 310 (427)
+.|..+++....... ......++|+|+++.+++++.....++.+++...
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999999887433311 1356899999999999988888888998888765
No 253
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.37 E-value=0.073 Score=47.79 Aligned_cols=227 Identities=10% Similarity=0.084 Sum_probs=128.4
Q ss_pred EEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCccccccc
Q 014302 113 IVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLGA 191 (427)
Q Consensus 113 ~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~~~~~ 191 (427)
+|+.+ ....|+..+++............ ...+..++|.+.+..++.+-.. +.|..++.+ .+
T Consensus 6 ~ll~~-~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~---------g~------- 67 (318)
T 3sov_A 6 LLLYA-NRRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFN---------KT------- 67 (318)
T ss_dssp EEEEE-CEEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETT---------SS-------
T ss_pred EEEEE-ccCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEcc---------CC-------
Confidence 44444 35678888887653122222222 2356789999876566655543 667677665 00
Q ss_pred ccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCcEEEEEcCCCCc
Q 014302 192 LSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGTFYLWETNTWTS 270 (427)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~ 270 (427)
. . . ...+.........+++.+.+..|+ +-...+.|.++++.....
T Consensus 68 -------~-----------~-~---------------~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 68 -------E-----------S-V---------------QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp -------S-----------C-C---------------CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred -------C-----------c-e---------------EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 0 0 0 001111123455688887666666 555677899999875443
Q ss_pred cccc-cCCCCeeEEEECCCCCEEEEEEcC-CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEE
Q 014302 271 EPWS-STSGFVTGATWDPEGRMILLAFAG-SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLA 348 (427)
Q Consensus 271 ~~~~-~~~~~v~~v~~spdg~~l~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La 348 (427)
..+. ........+++.|.+..|+.+... ...|+.+++....... .. ...-...+.++|+|++..|.
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~---------~~~l~~Pnglavd~~~~~lY 181 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI---II---------NSEIYWPNGLTLDYEEQKLY 181 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE---EE---------CSSCSCEEEEEEETTTTEEE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE---EE---------ECCCCCccEEEEeccCCEEE
Confidence 3332 344567889999987777766533 3566666554321100 00 00112568999999888887
Q ss_pred EEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEec
Q 014302 349 VSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 349 ~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
.+ +... +.|..+++.......+ +.+ ....|..+++. .+.+..+-|..++|..++.
T Consensus 182 ~a--D~~~---~~I~~~d~dG~~~~~~-----~~~--~~~~P~glav~----~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 182 WA--DAKL---NFIHKSNLDGTNRQAV-----VKG--SLPHPFALTLF----EDILYWTDWSTHSILACNK 236 (318)
T ss_dssp EE--ETTT---TEEEEEETTSCSCEEE-----ECS--CCSCEEEEEEE----TTEEEEEETTTTEEEEEET
T ss_pred EE--ECCC---CEEEEEcCCCCceEEE-----ecC--CCCCceEEEEe----CCEEEEEecCCCeEEEEEC
Confidence 75 4433 5699999865433221 111 12235566663 2456666777777777764
No 254
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.37 E-value=0.081 Score=48.13 Aligned_cols=102 Identities=10% Similarity=0.074 Sum_probs=62.0
Q ss_pred CeEEEEEccCCCEEEEEe-----------------cCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCc
Q 014302 238 GLSILKWSPTGDYFFAAK-----------------FDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSL 300 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~-----------------~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~ 300 (427)
....+.+.++|++.++.. ..|.|.-+|. ++.......-...+.++||||++.|+++.+...
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~ 243 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAH 243 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCC
Confidence 455677777776655443 1234444443 333333334456789999999999998887777
Q ss_pred eeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECC-CCCEEEEEE
Q 014302 301 TLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDA-SGERLAVSY 351 (427)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp-~g~~La~~~ 351 (427)
.|+.+++... ..+... ..+...+..-.+++++ +|.+.+++.
T Consensus 244 ~I~~~~~~~~-g~l~~~---------~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 244 KIHVYEKHAN-WTLTPL---------RVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEEEEECTT-SCEEEE---------EEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred eEEEEEECCC-CcEecC---------EEEeCCCCCceEEEeCCCCcEEEEec
Confidence 8888887642 111110 0111234678899999 599877654
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.34 E-value=0.063 Score=46.33 Aligned_cols=198 Identities=15% Similarity=0.190 Sum_probs=109.7
Q ss_pred ceeeeEEcCCCCEE-EEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIV-AFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~l-at~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~~~ 178 (427)
.+..++|+|++..| ++...++.|...|.+ + .....+...-......|++.+++ .++++. .++.+.++++...+
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g-~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~-- 102 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-G-DLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISLTPNS-- 102 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-C-CEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEECTTC--
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-C-CEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCC--
Confidence 68999999987654 456667787777766 2 22222222223567889999888 444433 44778888876111
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCC
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDG 258 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg 258 (427)
....+. .+.+ +-+ ......+...++|+|.++.|+++....
T Consensus 103 --------------------~i~~~~-----------~~~~-~~~--------~~~~N~g~EGLA~d~~~~~L~va~E~~ 142 (255)
T 3qqz_A 103 --------------------EVKILK-----------KIKI-PLQ--------ESPTNCGFEGLAYSRQDHTFWFFKEKN 142 (255)
T ss_dssp --------------------CEEEEE-----------EEEC-CCS--------SCCCSSCCEEEEEETTTTEEEEEEESS
T ss_pred --------------------eeeeee-----------eecc-ccc--------cccccCCcceEEEeCCCCEEEEEECcC
Confidence 000011 1110 000 001245678899999998888776665
Q ss_pred cEEEEEcCCC---Cccccc--------cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccccccccccc-c
Q 014302 259 TFYLWETNTW---TSEPWS--------STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPD-I 326 (427)
Q Consensus 259 ~v~iwd~~~~---~~~~~~--------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~ 326 (427)
...||.++.. ...... .....+.++++.|....+++.+.....+..++...+.. .. ..+.. .
T Consensus 143 p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~--~~----~~L~~g~ 216 (255)
T 3qqz_A 143 PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI--GE----MSLTKGS 216 (255)
T ss_dssp SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE--EE----EECSTTG
T ss_pred CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEE--EE----EEcCCcc
Confidence 5556655411 011110 23346789999998777777666666666665444310 00 00000 0
Q ss_pred eeec-cCCceeEEEECCCCCEEEE
Q 014302 327 VSLT-GSQGIEKIAWDASGERLAV 349 (427)
Q Consensus 327 ~~~~-~~~~i~~v~~sp~g~~La~ 349 (427)
..+. .-.....|+|+++|+..++
T Consensus 217 ~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 217 RGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp GGCSSCCCSEEEEEECTTCCEEEE
T ss_pred CCcccccCCCCeeEECCCCCEEEE
Confidence 0000 0114688999999986666
No 256
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.28 E-value=0.0017 Score=65.30 Aligned_cols=153 Identities=10% Similarity=-0.010 Sum_probs=84.1
Q ss_pred EEEEccCCCEEE-EEecCCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCcccc
Q 014302 241 ILKWSPTGDYFF-AAKFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 241 ~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~~~~ 317 (427)
.+++.+.+..|+ +-...+.|.++++.......+. ........+++.|.+.+|+.+.... +.|+.+.+.......
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~--- 533 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS--- 533 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE---
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE---
Confidence 466665444444 4345677888887655433332 2234567889999777766554332 355555443321100
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEecc
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHD 397 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 397 (427)
.. ...-...+.|+|+|++..|.++ +... +.|.++++.......+ +........|..|++..
T Consensus 534 l~---------~~~l~~PnGlavd~~~~~LY~a--D~~~---~~I~~~d~dG~~~~~~-----~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 534 LV---------TENIQWPNGITLDLLSGRLYWV--DSKL---HSISSIDVNGGNRKTI-----LEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp ES---------CSSCSSCCCEEECTTTCCEEEE--ETTT---TEEEEECSSSSCCEEE-----CCCSSSCSSCCCCEEET
T ss_pred EE---------eCCCCCccEEEEeccCCEEEEE--ecCC---CeEEEEccCCCceEEE-----EecCCcCCCceEeEEEC
Confidence 00 0011246789999988877775 3333 5699999865433322 11111222345555543
Q ss_pred CCCCCceeEEEeeCceEEEEec
Q 014302 398 KFKQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 398 ~~~~g~~l~v~~~~g~i~~~~~ 419 (427)
+.++.+.|..++|..++.
T Consensus 595 ----~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 595 ----DKVFWTDIINEAIFSANR 612 (699)
T ss_dssp ----TEEEEECSTTTCEEEEET
T ss_pred ----CEEEEEeCCCCeEEEEEc
Confidence 356777778888887763
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.27 E-value=0.098 Score=53.47 Aligned_cols=242 Identities=10% Similarity=0.069 Sum_probs=132.1
Q ss_pred CCCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeecc----CCcCCeeEEEEccCCCceEEEecCCeEEEEecc
Q 014302 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTS----DSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 173 (427)
Q Consensus 98 ~~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~----~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~ 173 (427)
....|.++...++|+.|-.|+.++-+.+|+...+ ....... .....|.++...++| .+.++.. +++.+|+..
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~--~~~~~~~~~~~l~~~~v~~i~~d~~g-~lwigt~-~Gl~~~~~~ 479 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG--QVENFNQRNSQLVNENVYAILPDGEG-NLWLGTL-SALVRFNPE 479 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC--CEEEECTTTSCCSCSCEEEEEECSSS-CEEEEES-SCEEEEETT
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC--cEEEeecCCCCcCCCeeEEEEECCCC-CEEEEec-CceeEEeCC
Confidence 3457899999888885666777777888887665 2222211 134578999888888 5554444 678888875
Q ss_pred CCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEE
Q 014302 174 YPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFA 253 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~ 253 (427)
++ .+.... .. .+. -......|.++...++|+..+.
T Consensus 480 ---------~~--------------~~~~~~---~~-----------~~~--------~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 480 ---------QR--------------SFTTIE---KE-----------KDG--------TPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp ---------TT--------------EEEECC---BC-----------TTC--------CBCCCCCEEEEEECTTCCEEEE
T ss_pred ---------CC--------------eEEEcc---cc-----------ccc--------cccCCceEEEEEECCCCCEEEE
Confidence 11 111100 00 000 0001245778888888875553
Q ss_pred EecCCcEEEEEcCCCCccccc-------cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccc
Q 014302 254 AKFDGTFYLWETNTWTSEPWS-------STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDI 326 (427)
Q Consensus 254 ~~~dg~v~iwd~~~~~~~~~~-------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 326 (427)
. . +.|..||..+.+. .+. .....|.++...++|+..+.+ .. -+..++.... .+.. . ...
T Consensus 515 t-~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~--Gl~~~d~~~~--~~~~----~--~~~ 580 (795)
T 4a2l_A 515 G-E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE--GFYCFNEKDK--QIKR----Y--NTT 580 (795)
T ss_dssp E-S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS--CEEEEETTTT--EEEE----E--CGG
T ss_pred e-C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC--CceeECCCCC--cEEE----e--CCC
Confidence 3 3 5688888776543 211 234578899999999876643 33 2444443222 1110 0 000
Q ss_pred eeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCC-CceeEEeccCCCCCcee
Q 014302 327 VSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNP-KPVAFSFHDKFKQGPLL 405 (427)
Q Consensus 327 ~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~~~~g~~l 405 (427)
..+ ....|.++..+++|...+++ . . -|..|+.++........ ..+..... ...++...+ +| .|
T Consensus 581 ~gl-~~~~i~~i~~d~~g~lWi~t--~-~-----Gl~~~~~~~~~~~~~~~---~dGl~~~~f~~~~~~~~~---~G-~l 644 (795)
T 4a2l_A 581 NGL-PNNVVYGILEDSFGRLWLST--N-R-----GISCFNPETEKFRNFTE---SDGLQSNQFNTASYCRTS---VG-QM 644 (795)
T ss_dssp GTC-SCSCEEEEEECTTSCEEEEE--T-T-----EEEEEETTTTEEEEECG---GGTCSCSCEEEEEEEECT---TS-CE
T ss_pred CCC-chhheEEEEECCCCCEEEEc--C-C-----ceEEEcCCCCcEEEcCC---cCCCccccCccCceeECC---CC-eE
Confidence 001 12368899999999887764 2 1 17888887765442221 11111110 011222222 24 36
Q ss_pred EEEeeCceEEEEe
Q 014302 406 SVCWSSGFCCTYP 418 (427)
Q Consensus 406 ~v~~~~g~i~~~~ 418 (427)
-+|..+|-+.+-|
T Consensus 645 ~~g~~~Gl~~~~p 657 (795)
T 4a2l_A 645 YFGGINGITTFRP 657 (795)
T ss_dssp EEEETTEEEEECG
T ss_pred EEecCCceEEEcH
Confidence 6677888777665
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.25 E-value=0.033 Score=49.97 Aligned_cols=114 Identities=9% Similarity=-0.041 Sum_probs=63.8
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc-----cCCCCeeEEEECC-CCCEEEEEEcC-------------
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS-----STSGFVTGATWDP-EGRMILLAFAG------------- 298 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~-----~~~~~v~~v~~sp-dg~~l~~~~~~------------- 298 (427)
....+++.+++..|+++...+.|..+|..++....+. ........+++.+ +|+..++....
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 4677889873345555555566888887654432222 1123467899999 99766543221
Q ss_pred ---CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 299 ---SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 299 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
.+.++.++..... . . .....-...+.++|+|+|++|.++-.. . +.|.+|++..
T Consensus 161 ~~~~g~v~~~d~~~~~--~----~-------~~~~~~~~p~gia~~~dg~~lyv~d~~--~---~~I~~~~~~~ 216 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKE--T----T-------LLLKELHVPGGAEVSADSSFVLVAEFL--S---HQIVKYWLEG 216 (322)
T ss_dssp TCCCEEEEEEETTTTE--E----E-------EEEEEESCCCEEEECTTSSEEEEEEGG--G---TEEEEEESSS
T ss_pred cCCCceEEEEeCCCCE--E----E-------EeccCCccCcceEECCCCCEEEEEeCC--C---CeEEEEECCC
Confidence 1233333322110 0 0 000011245789999999988775322 2 4599999875
No 259
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.23 E-value=0.11 Score=46.63 Aligned_cols=205 Identities=7% Similarity=-0.021 Sum_probs=114.3
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCC--CCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDS--GKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~--~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~ 176 (427)
...+++|++.+..|..+ ..++.|..++++.. ......+..........+++.+.+..++.+- ..+.|.+.+.+
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~--- 107 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--- 107 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT---
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC---
Confidence 56799999977655554 45689988887751 0112222222223457888887654555553 44778777765
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF 256 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 256 (427)
+.....+ +.........++++|.+.+|+.+..
T Consensus 108 --------------------g~~~~~~----------------------------~~~~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 108 --------------------GVKRKTL----------------------------FRENGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp --------------------SSSEEEE----------------------------EECTTCCEEEEEEETTTTEEEEEEC
T ss_pred --------------------CCceEEE----------------------------EECCCCCcceEEeCCCCCEEEEEcc
Confidence 0000000 0001224567888887777775443
Q ss_pred C--CcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCC
Q 014302 257 D--GTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQ 333 (427)
Q Consensus 257 d--g~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (427)
. +.|...++.......+. ..-.....++|++++..|+.+......|..+++....... . .. ....-.
T Consensus 140 ~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~----~-~~-----~~~~~~ 209 (316)
T 1ijq_A 140 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT----I-LE-----DEKRLA 209 (316)
T ss_dssp SSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE----E-EE-----CTTTTS
T ss_pred CCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEE----E-ee-----cCCccC
Confidence 3 67888887543332222 2345678999999999888887776778887765431100 0 00 000112
Q ss_pred ceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 334 GIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 334 ~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
....+++. +..|.++ +... +.|..++..++...
T Consensus 210 ~P~giav~--~~~ly~~--d~~~---~~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 210 HPFSLAVF--EDKVFWT--DIIN---EAIFSANRLTGSDV 242 (316)
T ss_dssp SEEEEEEE--TTEEEEE--ETTT---TEEEEEETTTCCCC
T ss_pred CcEEEEEE--CCEEEEE--ECCC---CeEEEEeCCCCcce
Confidence 45677774 3455554 3332 55888887665543
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.16 E-value=0.28 Score=50.13 Aligned_cols=249 Identities=12% Similarity=0.088 Sum_probs=128.9
Q ss_pred eeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceee-ccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 102 LQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACIL-TSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 102 V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~-~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
|.++...++|.+.+ ++.++.+..|+.... ..... .......|.++...+++ .+.++...+++.+|+..
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~i~~i~~d~~g-~lwigt~~~Gl~~~~~~------- 243 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQK--TFEKVIPILGTKQIQAILQQSPT-RIWVATEGAGLFLINPK------- 243 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTC--CEEECC----CCCEEEEEEEETT-EEEEEEBSSCEEEEETT-------
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCC--eEEEecCCCCCCeeEEEEEcCCC-CEEEEECCCCeEEEeCC-------
Confidence 78888888887555 555545777776554 22111 11234568888888887 56555555678888875
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTF 260 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v 260 (427)
++ .+... . ..+.. ........|.++...++|...+ |+.+ .|
T Consensus 244 --~~--------------~~~~~---~-----------~~~~~-------~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl 284 (795)
T 4a2l_A 244 --TK--------------EIKNY---L-----------HSPSN-------PKSISSNYIRSLAMDSQNRLWI-GTFN-DL 284 (795)
T ss_dssp --TT--------------EEEEE---C-----------CCTTC-------TTSCSCSBEEEEEECTTSCEEE-EESS-CE
T ss_pred --CC--------------eEEEe---e-----------cCCCC-------ccccCCCeEEEEEEcCCCCEEE-EeCC-hh
Confidence 11 11110 0 00000 0000124578888888887544 4444 68
Q ss_pred EEEEcCCCCccccc--------cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccC
Q 014302 261 YLWETNTWTSEPWS--------STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGS 332 (427)
Q Consensus 261 ~iwd~~~~~~~~~~--------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (427)
.+||..+.....+. -....|.++...++|...+ ++.++ -+..++..... +.. .... ..... ...
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-gt~~~-Gl~~~~~~~~~--~~~-~~~~--~~~~~-l~~ 356 (795)
T 4a2l_A 285 NIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWL-GTYFG-GLNYYHPIRNR--FKN-IRNI--PYKNS-LSD 356 (795)
T ss_dssp EEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEE-EESSS-CEEEECGGGGS--SEE-ECCC--TTSSS-CSC
T ss_pred heEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEE-EECCC-CeEEeCCCccc--ceE-EcCC--CCCCC-CCC
Confidence 88987765543221 1345799999999998765 44433 33333322211 100 0000 00000 112
Q ss_pred CceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeee-eeeCCCCCCCceeEEeccCCCCCceeEEEeeC
Q 014302 333 QGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIG-FIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSS 411 (427)
Q Consensus 333 ~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~ 411 (427)
..|.++..+++|...+.+..+ -|..|+..++......... .-..........++...+ +|.+|.+|..+
T Consensus 357 ~~V~~i~~d~~g~lWiGt~~~-------Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~---~g~~lWigt~~ 426 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWIGTNDG-------GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE---KKSLVYIGTHA 426 (795)
T ss_dssp SSEEEEEECTTSCEEEEESSS-------CEEEECTTTCCEEEECCC------CCSCSCEEEEEEET---TTTEEEEEETT
T ss_pred CeeEEEEECCCCCEEEEECCC-------CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC---CCCEEEEEeCc
Confidence 368999999999876553211 2889998776654332110 000000112234444433 35557777665
Q ss_pred ceEEEEe
Q 014302 412 GFCCTYP 418 (427)
Q Consensus 412 g~i~~~~ 418 (427)
+-|..|+
T Consensus 427 ~Gl~~~d 433 (795)
T 4a2l_A 427 GGLSILH 433 (795)
T ss_dssp TEEEEEE
T ss_pred CceeEEe
Confidence 5566654
No 261
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.07 E-value=0.0087 Score=51.65 Aligned_cols=152 Identities=8% Similarity=0.023 Sum_probs=86.9
Q ss_pred eEEEEEccCCCEEEEEecCC--cEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccc
Q 014302 239 LSILKWSPTGDYFFAAKFDG--TFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDA 316 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~ 316 (427)
...+.|+ ++.++.+.+.+| .|+++|+.+++.................+++..|......++.+.+++..+...
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~---- 119 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ---- 119 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE----
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE----
Confidence 3567888 664444666666 899999999987544433333333333345677777777777788777765421
Q ss_pred cccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEec
Q 014302 317 HLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFH 396 (427)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 396 (427)
...+...+.-..++ +|++.|.++ .++ ..|.++|..+.+.....+.+. ..........+.|.
T Consensus 120 ---------~~ti~~~~eG~glt--~dg~~L~~S--dGs----~~i~~iDp~T~~v~~~I~V~~--~g~~~~~lNELe~~ 180 (262)
T 3nol_A 120 ---------VRSFNYDGEGWGLT--HNDQYLIMS--DGT----PVLRFLDPESLTPVRTITVTA--HGEELPELNELEWV 180 (262)
T ss_dssp ---------EEEEECSSCCCCEE--ECSSCEEEC--CSS----SEEEEECTTTCSEEEEEECEE--TTEECCCEEEEEEE
T ss_pred ---------EEEEECCCCceEEe--cCCCEEEEE--CCC----CeEEEEcCCCCeEEEEEEecc--CCccccccceeEEE
Confidence 01111111113333 567888774 322 459999999887764443321 10000111234443
Q ss_pred cCCCCCceeEEEeeCceEEEEe
Q 014302 397 DKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 397 ~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
+|.+.+..|.+..|..++
T Consensus 181 ----~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 181 ----DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp ----TTEEEEEETTSSEEEEEC
T ss_pred ----CCEEEEEEccCCeEEEEE
Confidence 367777778777777665
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.99 E-value=0.13 Score=45.75 Aligned_cols=159 Identities=15% Similarity=0.051 Sum_probs=77.3
Q ss_pred CeEEEEEccCCCEEEEEecCC--cEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCC
Q 014302 238 GLSILKWSPTGDYFFAAKFDG--TFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPS 313 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg--~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~ 313 (427)
....++++++|+.+++..... .|..+|..+++...+. ........++..+++. ++++....+.++.++.......
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEe
Confidence 356788889988555443322 4666676666543222 1222334555555444 4444444556776665432100
Q ss_pred c---cccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc-CceEEEeeeeeeeCCCCCCC
Q 014302 314 L---DAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR-TPLISLSLIGFIRGPGDNPK 389 (427)
Q Consensus 314 ~---~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~ 389 (427)
+ ......... ...-...+.+ +|++++|.++ .... +.|.+|++.. +.+-... -+... ..
T Consensus 152 v~~~~~~~~~~~~-----~~~~~~pngi--s~dg~~lyv~--d~~~---~~I~~~~~~~~g~~~~~~--~~~~~----~~ 213 (306)
T 2p4o_A 152 IWLEHPMLARSNS-----ESVFPAANGL--KRFGNFLYVS--NTEK---MLLLRIPVDSTDKPGEPE--IFVEQ----TN 213 (306)
T ss_dssp EEEECGGGSCSST-----TCCSCSEEEE--EEETTEEEEE--ETTT---TEEEEEEBCTTSCBCCCE--EEEES----CC
T ss_pred EEEECCccccccc-----cCCCCcCCCc--CcCCCEEEEE--eCCC---CEEEEEEeCCCCCCCccE--EEecc----CC
Confidence 0 000000000 0000134455 8899888876 3333 4699999864 3221000 01111 12
Q ss_pred ceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 390 PVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 390 ~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
|-.+++.++ |.++...+..++|..|+
T Consensus 214 P~gi~vd~d---G~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 214 IDDFAFDVE---GNLYGATHIYNSVVRIA 239 (306)
T ss_dssp CSSEEEBTT---CCEEEECBTTCCEEEEC
T ss_pred CCCeEECCC---CCEEEEeCCCCeEEEEC
Confidence 445666654 55655556667777665
No 263
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.99 E-value=0.19 Score=45.24 Aligned_cols=166 Identities=11% Similarity=0.146 Sum_probs=88.0
Q ss_pred CceeeeEEcCCCCEEEEEeCCCeEEEEEccCC-CCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCc
Q 014302 100 VDLQGVSWHQHKHIVAFISGSTQVIVRDYEDS-GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNA 178 (427)
Q Consensus 100 ~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~ 178 (427)
..+.+|.|++ +..++++ ..+.|.. ..+.+ ..........+...+..+.+.+++ .+++++.++.+. ...
T Consensus 80 ~~~~~i~~~~-~~~~~~g-~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~g~v~--~S~----- 148 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWIVG-EPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNG-SAEMITNVGAIY--RTK----- 148 (327)
T ss_dssp CEEEEEEEET-TEEEEEE-ETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETT-EEEEEETTCCEE--EES-----
T ss_pred ccEEEEEecC-CeEEEEE-CCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCC-CEEEEeCCccEE--EEc-----
Confidence 3688899986 4555544 5665433 22222 111111111233457788887776 677777666542 221
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccC---ceEEe--------------ccCCeEE
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLG---TPIRR--------------GFGGLSI 241 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~---~~~~~--------------~~~~v~~ 241 (427)
+++..|..+.. .....+..+++.|++++++.+ ..++. ....+..
T Consensus 149 ----------------DgG~tW~~~~~---~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~ 209 (327)
T 2xbg_A 149 ----------------DSGKNWQALVQ---EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHN 209 (327)
T ss_dssp ----------------STTSSEEEEEC---SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEE
T ss_pred ----------------CCCCCCEEeec---CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccce
Confidence 11223333321 113456677777777664321 11111 1245677
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcC---CCCccccc--cCCCCeeEEEECCCCCEEEEEE
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETN---TWTSEPWS--STSGFVTGATWDPEGRMILLAF 296 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~---~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~ 296 (427)
+.++++++.++ .+.+|.+++.+.. +.+..... .....+.++.+.+++..++++.
T Consensus 210 ~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 210 MGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred eEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 88889887554 4457888776422 22221111 1234588999999888777543
No 264
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.97 E-value=0.011 Score=51.17 Aligned_cols=150 Identities=11% Similarity=0.011 Sum_probs=86.0
Q ss_pred eEEEEEccCCCEEE-EEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcccc
Q 014302 239 LSILKWSPTGDYFF-AAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAH 317 (427)
Q Consensus 239 v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 317 (427)
...+.|+ +..|+ +.+.+|.|+++|+.+++..... ........-..+++..|+.....++.+.+++..+...
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~----- 128 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR----- 128 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE-----
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE-----
Confidence 3567776 34555 7778889999999999874433 2233333222334566666667777777777765411
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEecc
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHD 397 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 397 (427)
...+...+.-..++ +|++.|.++ .++ +.|.++|.++.+.....+.+. ..........+.|.
T Consensus 129 --------~~ti~~~~eGwGLt--~Dg~~L~vS--dGs----~~l~~iDp~T~~v~~~I~V~~--~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 129 --------ERTTRYSGEGWGLC--YWNGKLVRS--DGG----TMLTFHEPDGFALVGAVQVKL--RGQPVELINELECA- 189 (268)
T ss_dssp --------EEEEECSSCCCCEE--EETTEEEEE--CSS----SEEEEECTTTCCEEEEEECEE--TTEECCCEEEEEEE-
T ss_pred --------EEEEeCCCceeEEe--cCCCEEEEE--CCC----CEEEEEcCCCCeEEEEEEeCC--CCcccccccccEEe-
Confidence 00111111113444 568888885 332 469999999887764443322 11111112234443
Q ss_pred CCCCCceeEEEeeCceEEEEe
Q 014302 398 KFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 398 ~~~~g~~l~v~~~~g~i~~~~ 418 (427)
+|.+.+..|.+..|..++
T Consensus 190 ---dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 190 ---NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp ---TTEEEEEETTCSEEEEEC
T ss_pred ---CCEEEEEECCCCeEEEEe
Confidence 367777778777777765
No 265
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.92 E-value=0.00032 Score=64.89 Aligned_cols=106 Identities=12% Similarity=0.083 Sum_probs=41.5
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCcc-ccccCCC-Ce-eEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccc
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSE-PWSSTSG-FV-TGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLP 320 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~-~v-~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 320 (427)
+..+++.+++++.|+.|+.||..+++.. .+..+.. .+ .+.++. ++..+++++ .++.++.++..+......-.
T Consensus 45 ~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~-~dg~v~a~D~~tG~~~w~~~--- 119 (369)
T 2hz6_A 45 THVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGK-KQDIWYVIDLLTGEKQQTLS--- 119 (369)
T ss_dssp -----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCE-EEEEEEEECCC------------
T ss_pred eEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEe-CCCEEEEEECCCCcEEEEec---
Confidence 3456767777788999999999887653 2211100 01 111121 234455443 34467777766542211000
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.. ....++|++..|+++ +.+ +.|+.||.++++.+
T Consensus 120 ----------~~---~~~~~~p~~~~v~~~---~~d---g~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 120 ----------SA---FADSLSPSTSLLYLG---RTE---YTITMYDTKTRELR 153 (369)
T ss_dssp --------------------------EEEE---EEE---EEEECCCSSSSSCC
T ss_pred ----------CC---CcccccccCCEEEEE---ecC---CEEEEEECCCCCEE
Confidence 00 013456678888773 333 67999999988764
No 266
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.90 E-value=0.11 Score=46.34 Aligned_cols=219 Identities=10% Similarity=-0.036 Sum_probs=108.6
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccCcccccc
Q 014302 111 KHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSGAASFLG 190 (427)
Q Consensus 111 g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~~~~~~~ 190 (427)
+..|.+++.++.+..+|.. + ............+.++...+++ .+++...++.+..++.. +.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g--~~~~~~~~~~~~~~~~~~~~~g-~l~vgt~~~~l~~~d~~--g~------------- 167 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-G--TEKWRFKTKKAIYATPIVSEDG-TIYVGSNDNYLYAINPD--GT------------- 167 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-S--CEEEEEECSSCCCSCCEECTTS-CEEEECTTSEEEEECTT--SC-------------
T ss_pred CCEEEEEecCCEEEEEcCC-C--CEEEEEcCCCceeeeeEEcCCC-EEEEEcCCCEEEEECCC--CC-------------
Confidence 4456667777888777766 3 1222222233345666666666 55555555777777754 00
Q ss_pred cccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc
Q 014302 191 ALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 270 (427)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~ 270 (427)
. ...+. .....+.++...+++...+ ++ +.|..+| .+++.
T Consensus 168 --------~---~~~~~--------------------------~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~ 206 (330)
T 3hxj_A 168 --------E---KWRFK--------------------------TNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTE 206 (330)
T ss_dssp --------E---EEEEE--------------------------CSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCE
T ss_pred --------E---eEEEe--------------------------cCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcE
Confidence 0 00000 0111233455556666443 44 7788888 54443
Q ss_pred c-ccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEE
Q 014302 271 E-PWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAV 349 (427)
Q Consensus 271 ~-~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~ 349 (427)
. ........+.++...++|...+ ++.++ .+..++.... .+. +. ......+..+.+++++...+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~-gl~~~~~~g~--~~~-~~----------~~~~~~~~~~~~~~~g~l~v~ 271 (330)
T 3hxj_A 207 KWNFYAGYWTVTRPAISEDGTIYV-TSLDG-HLYAINPDGT--EKW-RF----------KTGKRIESSPVIGNTDTIYFG 271 (330)
T ss_dssp EEEECCSSCCCSCCEECTTSCEEE-EETTT-EEEEECTTSC--EEE-EE----------ECSSCCCSCCEECTTSCEEEE
T ss_pred EEEEccCCcceeceEECCCCeEEE-EcCCC-eEEEECCCCC--EeE-Ee----------eCCCCccccceEcCCCeEEEe
Confidence 2 2223345678888888887655 44433 4444432111 000 00 001112345566777765544
Q ss_pred EEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEeccccC
Q 014302 350 SYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYPLIFRS 423 (427)
Q Consensus 350 ~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~~~~~~ 423 (427)
+.+ |.|..+|. ++..+.... ..... ..++...+ +| .|-+|..+|.+.+.+.-.+.
T Consensus 272 ----t~~---ggl~~~d~-~g~~~~~~~-----~~~~~--~~~~~~d~---~g-~l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 272 ----SYD---GHLYAINP-DGTEKWNFE-----TGSWI--IATPVIDE---NG-TIYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp ----CTT---CEEEEECT-TSCEEEEEE-----CSSCC--CSCCEECT---TC-CEEEECTTSCEEEEEC----
T ss_pred ----cCC---CCEEEECC-CCcEEEEEE-----cCCcc--ccceEEcC---CC-EEEEEcCCCeEEEEeccccc
Confidence 333 45888885 555432211 11111 12232322 23 47789999999999865543
No 267
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.89 E-value=0.31 Score=49.49 Aligned_cols=159 Identities=8% Similarity=0.006 Sum_probs=95.1
Q ss_pred ceeeeEEcCCCCEEEE-EeCCCeEEEEEccCCC--CcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAF-ISGSTQVIVRDYEDSG--KDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat-~~~d~~v~vwd~~~~~--~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~ 176 (427)
.+.+|+|++.+..|.. -...+.|+.++++... .....+..........|++.+.+.+++.+-.. +.|.+.+++
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld--- 501 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--- 501 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT---
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC---
Confidence 5778999986665544 4456788888876531 11222333233456788888877556555443 777777765
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF 256 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 256 (427)
+..... .+.........|+++|.+.+|+....
T Consensus 502 --------------------G~~~~~----------------------------l~~~~l~~P~gIaVDp~~g~LYwtD~ 533 (791)
T 3m0c_C 502 --------------------GVKRKT----------------------------LFRENGSKPRAIVVDPVHGFMYWTDW 533 (791)
T ss_dssp --------------------SSSEEE----------------------------EEECTTCCEEEEEEETTTTEEEEEEC
T ss_pred --------------------CCeEEE----------------------------EEeCCCCCcceEEEecCCCCEEEecC
Confidence 000000 01111234667888888777775543
Q ss_pred --CCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCC
Q 014302 257 --DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 310 (427)
Q Consensus 257 --dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~ 310 (427)
.+.|.+.++.......+. ..-.....|++.+.+..|+.+-.....|..+++...
T Consensus 534 g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 534 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp SSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 267888887655443333 333578899999888888887766667777776543
No 268
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.85 E-value=0.25 Score=44.51 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=71.9
Q ss_pred CeEEEEE--ccC-CC-EEEEEecCCcEEEEEcCC---CCc----cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeee
Q 014302 238 GLSILKW--SPT-GD-YFFAAKFDGTFYLWETNT---WTS----EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIH 306 (427)
Q Consensus 238 ~v~~~~~--sp~-g~-~l~~~~~dg~v~iwd~~~---~~~----~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~ 306 (427)
.++.+++ +|. ++ ++++...+|.+..|++.. ++. .......+.+..+...+....|+++-.+. .|+.++
T Consensus 129 ~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~-GIw~~d 207 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDE-AIWKFS 207 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTT-EEEEEE
T ss_pred CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccc-eEEEEe
Confidence 4455665 664 44 566888899999999843 211 12224556788899998888888775554 455555
Q ss_pred eCCCCCCccccccccccccceeeccCCceeEEEE--CCCCC-EEEEEEecCCCcceeEEEEEEec-cCceE
Q 014302 307 FASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAW--DASGE-RLAVSYKGGDDIYKGLIAIYDAR-RTPLI 373 (427)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~--sp~g~-~La~~~~~~~d~~~g~i~vwd~~-~~~~~ 373 (427)
...... ...... .. ...-.....+..|++ .++++ ||+++..+. .+..|||.+ ..+.+
T Consensus 208 a~p~~~-~~~~~v--~~--~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~-----~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 208 AEPDGG-SNGTVI--DR--ADGRHLTRDIEGLTIYYAADGKGYLMASSQGN-----SSYAIYDRQGKNKYV 268 (355)
T ss_dssp CSTTSC-SCCEEE--EE--BSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG-----TEEEEEESSTTCCEE
T ss_pred CCcCCC-CCceEE--EE--ecCCccccCcceEEEEecCCCCEEEEEEcCCC-----CEEEEEECCCCCcEE
Confidence 333210 000000 00 000001136788887 56777 777765554 359999997 44444
No 269
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.85 E-value=0.25 Score=44.42 Aligned_cols=155 Identities=17% Similarity=0.281 Sum_probs=77.1
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEc--CCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCc
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWET--NTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSL 314 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~--~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~ 314 (427)
..+..+.+.+++++++++...+.++-+|- .+.+... ......+..+.+.++++.++.+ .+ +.++... .+.-.++
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~-~~-G~~~~s~-~D~G~tW 238 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLWMIV-NG-GKIAFSD-PDNSENW 238 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEEEEE-TT-TEEEEEE-TTEEEEE
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-CCCCCccceeEECCCCCEEEEe-CC-ceEEEec-CCCCCee
Confidence 46788899999888776654333333442 2222221 1345678889999999877543 33 3333321 1100000
Q ss_pred cccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEE
Q 014302 315 DAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFS 394 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (427)
.. +..+ .+.....+.++++.+++..+++ +.. |.| ++....+..-..... .........++.
T Consensus 239 ~~----~~~~---~~~~~~~~~~v~~~~~~~~~~~---g~~----g~i-~~S~DgG~tW~~~~~----~~~~~~~~~~v~ 299 (327)
T 2xbg_A 239 GE----LLSP---LRRNSVGFLDLAYRTPNEVWLA---GGA----GAL-LCSQDGGQTWQQDVD----VKKVPSNFYKIL 299 (327)
T ss_dssp CC----CBCT---TSSCCSCEEEEEESSSSCEEEE---EST----TCE-EEESSTTSSCEECGG----GTTSSSCCCEEE
T ss_pred Ee----ccCC---cccCCcceEEEEecCCCEEEEE---eCC----CeE-EEeCCCCcccEEcCc----cCCCCCCeEEEE
Confidence 00 0000 0011125788999998888877 332 334 333333332211110 001112345677
Q ss_pred eccCCCCCceeEEEeeCceEEEEe
Q 014302 395 FHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 395 f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
|.+. +.++++| .+|.|.-++
T Consensus 300 ~~~~---~~~~~~G-~~G~i~~~~ 319 (327)
T 2xbg_A 300 FFSP---DQGFILG-QKGILLRYV 319 (327)
T ss_dssp EEET---TEEEEEC-STTEEEEEC
T ss_pred EECC---CceEEEc-CCceEEEEc
Confidence 7642 4556665 788877664
No 270
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.82 E-value=0.14 Score=51.21 Aligned_cols=22 Identities=18% Similarity=0.007 Sum_probs=18.2
Q ss_pred CCCEEEEEeCCCeEEEEEccCC
Q 014302 110 HKHIVAFISGSTQVIVRDYEDS 131 (427)
Q Consensus 110 ~g~~lat~~~d~~v~vwd~~~~ 131 (427)
++..|++++.|+.+..+|..++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG 148 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATG 148 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTC
T ss_pred ECCEEEEEcCCCEEEEEECCCC
Confidence 4567888888999999998777
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.82 E-value=0.11 Score=51.69 Aligned_cols=69 Identities=10% Similarity=0.056 Sum_probs=44.3
Q ss_pred eeEEcC-CCCEEEEEeCCC-----------eEEEEEccCCCCcceeec-cCCcCCeeEEEEccCCCceEEEecC--CeEE
Q 014302 104 GVSWHQ-HKHIVAFISGST-----------QVIVRDYEDSGKDACILT-SDSQRDVKVLEWRPNGGRSLSVGCK--GGIC 168 (427)
Q Consensus 104 ~l~~sp-~g~~lat~~~d~-----------~v~vwd~~~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~la~g~~--~~i~ 168 (427)
++++.| ++++++.|+.+. .+.+||..+......... ..+.....++++.+++ ++++.|+. ..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC-CEEEeCCCCCCceE
Confidence 556777 888888887543 577888877744333222 2233334457788888 67776653 5688
Q ss_pred EEecc
Q 014302 169 IWAPS 173 (427)
Q Consensus 169 iw~~~ 173 (427)
+||..
T Consensus 269 ~yd~~ 273 (656)
T 1k3i_A 269 LYDSS 273 (656)
T ss_dssp EEEGG
T ss_pred EecCc
Confidence 88876
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.78 E-value=0.27 Score=43.98 Aligned_cols=201 Identities=8% Similarity=-0.001 Sum_probs=115.3
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~~~ 178 (427)
.+.+++|++.+..|... ...+.|..++++...........+ -.....+++.+.+..++.+-. .+.|.+++.+
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~-l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d----- 109 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLD----- 109 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC-CSCCCEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC-CCCccEEEEEcCCCeEEEEECCCCEEEEEECC-----
Confidence 46789999976655444 456888888876652112222222 234667888876545555543 4777777765
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec--
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF-- 256 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-- 256 (427)
+.....+ +.........+++.|.+.+|+.+..
T Consensus 110 ------------------G~~~~~l----------------------------~~~~~~~P~giavdp~~g~ly~td~~~ 143 (318)
T 3sov_A 110 ------------------GSLRKVL----------------------------FWQELDQPRAIALDPSSGFMYWTDWGE 143 (318)
T ss_dssp ------------------SCSCEEE----------------------------ECSSCSSEEEEEEEGGGTEEEEEECSS
T ss_pred ------------------CCcEEEE----------------------------EeCCCCCccEEEEeCCCCEEEEEecCC
Confidence 0000000 0001223567888887777775542
Q ss_pred CCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCce
Q 014302 257 DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGI 335 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 335 (427)
.+.|...++.......+. ..-.....++|++++..|+.+......|..+++....... .. .......
T Consensus 144 ~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~---~~---------~~~~~~P 211 (318)
T 3sov_A 144 VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQA---VV---------KGSLPHP 211 (318)
T ss_dssp SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EE---------CSCCSCE
T ss_pred CCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEE---Ee---------cCCCCCc
Confidence 567888887644333222 2334568999999999888887777788888775431100 00 0011245
Q ss_pred eEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce
Q 014302 336 EKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL 372 (427)
Q Consensus 336 ~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~ 372 (427)
..+++. +..|..+ +... +.|..++..++..
T Consensus 212 ~glav~--~~~lywt--d~~~---~~V~~~~~~~G~~ 241 (318)
T 3sov_A 212 FALTLF--EDILYWT--DWST---HSILACNKYTGEG 241 (318)
T ss_dssp EEEEEE--TTEEEEE--ETTT---TEEEEEETTTCCS
T ss_pred eEEEEe--CCEEEEE--ecCC---CeEEEEECCCCCc
Confidence 677775 3455554 3322 5688888866654
No 273
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.77 E-value=0.31 Score=44.34 Aligned_cols=59 Identities=3% Similarity=0.001 Sum_probs=35.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCccee---eccCCcCCeeEEEEccC---CCceEEEe
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACI---LTSDSQRDVKVLEWRPN---GGRSLSVG 162 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~---~~~~~~~~v~~l~~sp~---~~~~la~g 162 (427)
.-..|+|.|+|++++ +..++.|++++ .+...... ...........|+|+|+ +..++++-
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEE
Confidence 357899999998554 45679998877 33111111 11122356889999998 43554443
No 274
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.73 E-value=0.021 Score=57.48 Aligned_cols=206 Identities=7% Similarity=-0.024 Sum_probs=106.8
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCC--CCcceeeccCCcCCeeEEEEccCCCceEEEe-cCCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDS--GKDACILTSDSQRDVKVLEWRPNGGRSLSVG-CKGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~--~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g-~~~~i~iw~~~~~~ 176 (427)
.+.+|+|++.+..|..+ ...+.|+.+++... ......+..........|++.+.+..++.+- ..+.|.+.+++
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d--- 483 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--- 483 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS---
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC---
Confidence 56789999987766655 34578888887751 0111111111122355678876554555543 33777777765
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF 256 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 256 (427)
+.....+ +.. .......++++|.+.+|+.+..
T Consensus 484 --------------------g~~~~~l--~~~--------------------------~~~~P~giavDp~~g~ly~td~ 515 (699)
T 1n7d_A 484 --------------------GVKRKTL--FRE--------------------------QGSKPRAIVVDPVHGFMYWTDW 515 (699)
T ss_dssp --------------------SCCEEEE--CCC--------------------------SSCCCCCEECCSSSSCCEECCC
T ss_pred --------------------CCceEEE--EeC--------------------------CCCCcceEEEccCCCcEEEccc
Confidence 0000000 000 0112335566776555553332
Q ss_pred --CCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCC
Q 014302 257 --DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQ 333 (427)
Q Consensus 257 --dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (427)
.+.|.++++.......+. ..-.....++|+|++..|+++......|..+++...... .. +... ..-.
T Consensus 516 ~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~----~~-~~~~-----~~~~ 585 (699)
T 1n7d_A 516 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK----TI-LEDE-----KRLA 585 (699)
T ss_dssp SSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE----EE-CCCS-----SSCS
T ss_pred CCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE----EE-EecC-----CcCC
Confidence 256777776543332222 223456789999998888887776667877776542110 00 0000 0001
Q ss_pred ceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEE
Q 014302 334 GIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLIS 374 (427)
Q Consensus 334 ~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~ 374 (427)
....|++.. ..|.++ +... +.|..++..++..+.
T Consensus 586 ~P~glavd~--~~lywt--d~~~---~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 586 HPFSLAVFE--DKVFWT--DIIN---EAIFSANRLTGSDVN 619 (699)
T ss_dssp SCCCCEEET--TEEEEE--CSTT---TCEEEEETTTEEEEE
T ss_pred CceEeEEEC--CEEEEE--eCCC---CeEEEEEccCCCceE
Confidence 334555544 355554 3322 458888876665543
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.64 E-value=0.43 Score=44.28 Aligned_cols=158 Identities=8% Similarity=0.011 Sum_probs=95.9
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCCC--CcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEeccCCC
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSG--KDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPSYPG 176 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~~--~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~~~~ 176 (427)
.+.+|+|++.+..|... ...+.|+.++++... .....+..........+++.+.+..++.+-. .+.|.+.+++
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~--- 189 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK--- 189 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT---
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC---
Confidence 67899999977766555 456888888876521 1122333323345778888875545555543 3667666664
Q ss_pred CccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec
Q 014302 177 NAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF 256 (427)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~ 256 (427)
+..... .+.........++++|.+.+|+....
T Consensus 190 --------------------g~~~~~----------------------------l~~~~~~~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 190 --------------------GVKRKT----------------------------LFRENGSKPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp --------------------TCSEEE----------------------------EEECSSCCEEEEEEETTTTEEEEEEC
T ss_pred --------------------CCceEE----------------------------EEeCCCCCcceEEEecccCeEEEEeC
Confidence 000000 01111224567888887777775442
Q ss_pred --CCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 257 --DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 257 --dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
.+.|...++.......+. ..-.....+++++++..|+.+......|..+++..
T Consensus 222 ~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 222 GTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp SSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 367888888654443333 33356789999999999988877667788877654
No 276
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.63 E-value=0.052 Score=46.30 Aligned_cols=153 Identities=11% Similarity=-0.003 Sum_probs=83.7
Q ss_pred CeEEEEEccCCCEEEEEecC--CcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCcc
Q 014302 238 GLSILKWSPTGDYFFAAKFD--GTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLD 315 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~ 315 (427)
....+.|++ +....+.+.+ ..|+.+|+.+++.................+++..|......++.+.+++..+...
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~--- 97 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP--- 97 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE---
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE---
Confidence 355788875 4433465654 4899999999987544433333333323334667776667777777777665311
Q ss_pred ccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEe
Q 014302 316 AHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSF 395 (427)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 395 (427)
...+...+.-..++ ++++.|.++ .++ +.|.++|.++.+.......+. ..........+.+
T Consensus 98 ----------~~ti~~~~~Gwglt--~dg~~L~vS--dgs----~~l~~iDp~t~~~~~~I~V~~--~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 98 ----------RARFRYPGEGWALT--SDDSHLYMS--DGT----AVIRKLDPDTLQQVGSIKVTA--GGRPLDNLNELEW 157 (243)
T ss_dssp ----------EEEEECSSCCCEEE--ECSSCEEEE--CSS----SEEEEECTTTCCEEEEEECEE--TTEECCCEEEEEE
T ss_pred ----------EEEEeCCCCceEEe--eCCCEEEEE--CCC----CeEEEEeCCCCeEEEEEEEcc--CCcccccceeeEE
Confidence 11111111224444 567777774 333 459999999887764433321 1101111122333
Q ss_pred ccCCCCCceeEEEeeCceEEEEe
Q 014302 396 HDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 396 ~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
. +|.+.+..|.+..|..++
T Consensus 158 ~----~G~lyanvw~s~~I~vID 176 (243)
T 3mbr_X 158 V----NGELLANVWLTSRIARID 176 (243)
T ss_dssp E----TTEEEEEETTTTEEEEEC
T ss_pred e----CCEEEEEECCCCeEEEEE
Confidence 2 366777777776666655
No 277
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.46 E-value=0.074 Score=47.47 Aligned_cols=187 Identities=10% Similarity=0.002 Sum_probs=95.6
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAAS 180 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~ 180 (427)
.+.++...+++. |..++.++.+..+|.. + ............+.++...+++ .+++++ +++..++..
T Consensus 138 ~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g--~~~~~~~~~~~~~~~~~~d~~g-~l~v~t--~~l~~~d~~------- 203 (330)
T 3hxj_A 138 IYATPIVSEDGT-IYVGSNDNYLYAINPD-G--TEKWRFKTNDAITSAASIGKDG-TIYFGS--DKVYAINPD------- 203 (330)
T ss_dssp CCSCCEECTTSC-EEEECTTSEEEEECTT-S--CEEEEEECSSCCCSCCEECTTC-CEEEES--SSEEEECTT-------
T ss_pred eeeeeEEcCCCE-EEEEcCCCEEEEECCC-C--CEeEEEecCCCceeeeEEcCCC-EEEEEe--CEEEEECCC-------
Confidence 355666777776 4456677888888876 3 2222222233456777777777 455444 778888832
Q ss_pred cccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEecCCcE
Q 014302 181 VRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFDGTF 260 (427)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~dg~v 260 (427)
+ . ...... .....+.++...++|. |..++.++.|
T Consensus 204 ---g--------------~--~~~~~~--------------------------~~~~~~~~~~~~~~g~-l~v~t~~~gl 237 (330)
T 3hxj_A 204 ---G--------------T--EKWNFY--------------------------AGYWTVTRPAISEDGT-IYVTSLDGHL 237 (330)
T ss_dssp ---S--------------C--EEEEEC--------------------------CSSCCCSCCEECTTSC-EEEEETTTEE
T ss_pred ---C--------------c--EEEEEc--------------------------cCCcceeceEECCCCe-EEEEcCCCeE
Confidence 1 0 000000 0112345556666664 5556667778
Q ss_pred EEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEE
Q 014302 261 YLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAW 340 (427)
Q Consensus 261 ~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 340 (427)
..+|........+......+.++...++|...+ ++.+ +.+..++. +. ..... .......+.++..
T Consensus 238 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~-ggl~~~d~-~g--~~~~~----------~~~~~~~~~~~~~ 302 (330)
T 3hxj_A 238 YAINPDGTEKWRFKTGKRIESSPVIGNTDTIYF-GSYD-GHLYAINP-DG--TEKWN----------FETGSWIIATPVI 302 (330)
T ss_dssp EEECTTSCEEEEEECSSCCCSCCEECTTSCEEE-ECTT-CEEEEECT-TS--CEEEE----------EECSSCCCSCCEE
T ss_pred EEECCCCCEeEEeeCCCCccccceEcCCCeEEE-ecCC-CCEEEECC-CC--cEEEE----------EEcCCccccceEE
Confidence 888643222222222333344566666776544 4443 35555542 21 11000 0011235677788
Q ss_pred CCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 341 DASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 341 sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
+++|+..+. +.+ |.+++...+.
T Consensus 303 d~~g~l~~g----t~~---G~~~~~~~~~ 324 (330)
T 3hxj_A 303 DENGTIYFG----TRN---GKFYALFNLE 324 (330)
T ss_dssp CTTCCEEEE----CTT---SCEEEEEC--
T ss_pred cCCCEEEEE----cCC---CeEEEEeccc
Confidence 888876654 333 5577766543
No 278
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.46 E-value=0.088 Score=52.71 Aligned_cols=52 Identities=15% Similarity=0.203 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCC
Q 014302 258 GTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 310 (427)
Q Consensus 258 g~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~ 310 (427)
|.|..||+.+++..-...+...+....++.++..++++ ..++.++.++..+.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATG 508 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTC
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCC
Confidence 77999999888764333333444455566677777776 55668888887765
No 279
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.44 E-value=0.41 Score=44.20 Aligned_cols=162 Identities=10% Similarity=0.050 Sum_probs=92.6
Q ss_pred cCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCC---cCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccC
Q 014302 108 HQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDS---QRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSG 184 (427)
Q Consensus 108 sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~---~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~ 184 (427)
+.+|..|+++ .++.||.-++.... ....+...+ -..|..+..||+| .+||.-+..+|.|-.+..+.......
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g~~~V~Vv~LP~~~~~~~~~-- 103 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFNDNEIFVMEVPWGYSNVEDV-- 103 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTS-SEEEEECSSEEEEEECCTTCSCCCCH--
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCC-CEEEEecCCeEEEEEecCccccCccc--
Confidence 4566666666 35788876766442 222232321 2367889999999 89999889999998875110000000
Q ss_pred cccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccC---CCEEEEEecCCcEE
Q 014302 185 AASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPT---GDYFFAAKFDGTFY 261 (427)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~---g~~l~~~~~dg~v~ 261 (427)
.. ...+.+-.|.-+. .......+|..+.|+|- +..|++-..|+.||
T Consensus 104 --------------------~~----~~~~q~~ty~l~~-------~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir 152 (452)
T 3pbp_A 104 --------------------SI----QDAFQIFHYSIDE-------EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTIT 152 (452)
T ss_dssp --------------------HH----HHTTEEEEEEGGG-------CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEE
T ss_pred --------------------cc----ccccceeEEEcCC-------cccCCCCceeEEEeccccCCCCeEEEEecCCEEE
Confidence 00 0001111111000 00002356778888874 45899889999999
Q ss_pred EEEcCCCCcccc-c----------cCCCCeeEEEECCCCCEEEEEE-cCCceeeee
Q 014302 262 LWETNTWTSEPW-S----------STSGFVTGATWDPEGRMILLAF-AGSLTLGSI 305 (427)
Q Consensus 262 iwd~~~~~~~~~-~----------~~~~~v~~v~~spdg~~l~~~~-~~~~~i~~~ 305 (427)
+||+......+. . .....+.+++|..++-.|.... .++|.|+.+
T Consensus 153 ~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 153 MFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999986332111 0 2236788999999887666533 244456555
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.40 E-value=0.13 Score=46.01 Aligned_cols=69 Identities=12% Similarity=0.126 Sum_probs=44.0
Q ss_pred eEEEEEccCCCEEEEEecC-CcEEEEEcCCCCccccc------cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeC
Q 014302 239 LSILKWSPTGDYFFAAKFD-GTFYLWETNTWTSEPWS------STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFA 308 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~d-g~v~iwd~~~~~~~~~~------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~ 308 (427)
...++..++|+..++++.. +.|..++........+. ........++++|+|+.|+.... .+.|..+++.
T Consensus 139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp EEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred CceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 5566677777766666666 55555554433222111 12234678999999999988766 7788888876
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.38 E-value=0.29 Score=46.54 Aligned_cols=126 Identities=10% Similarity=0.028 Sum_probs=70.1
Q ss_pred CeEEEEE-------ccCCCEEEEEecCC-------cEEEEEcCC-CCcc-----ccccCCCCeeEEEECCCCCEEEEEEc
Q 014302 238 GLSILKW-------SPTGDYFFAAKFDG-------TFYLWETNT-WTSE-----PWSSTSGFVTGATWDPEGRMILLAFA 297 (427)
Q Consensus 238 ~v~~~~~-------sp~g~~l~~~~~dg-------~v~iwd~~~-~~~~-----~~~~~~~~v~~v~~spdg~~l~~~~~ 297 (427)
....++| +++|++|+++...+ .|.+++... +... ...........++.+|++..|+++..
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~ 266 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY 266 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC
Confidence 4677889 99999777665543 255665333 1211 11112234567889997777777777
Q ss_pred CCceeeeeeeC-------CCCCCcccccccc-ccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 298 GSLTLGSIHFA-------SKPPSLDAHLLPV-DLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 298 ~~~~i~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
..+.++.+++. ............. .+..............|+|+|+|++|.++ +... +.|+.++..
T Consensus 267 ~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYva--D~~~---h~I~kid~d 340 (496)
T 3kya_A 267 EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFG--VINN---HYFMRSDYD 340 (496)
T ss_dssp TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEE--ETTT---TEEEEEEEE
T ss_pred CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEE--eCCC---CEEEEEecC
Confidence 77788888876 3321000000000 00001111122356899999999976665 3333 458886654
No 282
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.30 E-value=0.62 Score=42.34 Aligned_cols=58 Identities=5% Similarity=-0.042 Sum_probs=35.2
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceee---ccCCcCCeeEEEEccC---CCceEEE
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACIL---TSDSQRDVKVLEWRPN---GGRSLSV 161 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~v~~l~~sp~---~~~~la~ 161 (427)
....|+|.|+|++++ +..++.|++++- .+ ...... ..........|+|+|+ +..++++
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G-~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLISP-SG-KKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEECS-SC-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEeC-CC-ceEeeccceeecCCCceeeEEeCCCCCcCCEEEEE
Confidence 357899999998554 456799888752 22 111111 1122356889999998 4355544
No 283
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.27 E-value=0.33 Score=44.30 Aligned_cols=60 Identities=15% Similarity=0.020 Sum_probs=34.0
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEecc
Q 014302 110 HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPS 173 (427)
Q Consensus 110 ~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~ 173 (427)
++..|.+++.++.+..+|..++. ..-............... ++ .+++...++.+..+|..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~--~~W~~~~~~~~~~~p~~~-~~-~v~v~~~~g~l~~~d~~ 161 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGT--VAWQTKVAGEALSRPVVS-DG-LVLIHTSNGQLQALNEA 161 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCC--EEEEEECSSCCCSCCEEE-TT-EEEEECTTSEEEEEETT
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--EEEEEeCCCceEcCCEEE-CC-EEEEEcCCCeEEEEECC
Confidence 35577778889999999887762 211111111111112222 44 56665666888888875
No 284
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.19 E-value=1.1 Score=44.21 Aligned_cols=224 Identities=11% Similarity=0.068 Sum_probs=129.0
Q ss_pred CEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCccccccCcccccc
Q 014302 112 HIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNAASVRSGAASFLG 190 (427)
Q Consensus 112 ~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~~~~~~~~~~~~~ 190 (427)
.+|+.+ ....|+..+++...... .+....-..+..|+|.+.+..++.+-.. +.|..++++
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~-~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~----------------- 67 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNV-AIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMN----------------- 67 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEE-ECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-----------------
T ss_pred cEEEEE-eCCcEEEEECCCCCcce-EEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECC-----------------
Confidence 355555 46688888887652211 1112223467899999987566665543 777766665
Q ss_pred cccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEecCCcEEEEEcCCCC
Q 014302 191 ALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAKFDGTFYLWETNTWT 269 (427)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~ 269 (427)
+.....+ +.........+++.+.+..|+ +-...+.|.+.++....
T Consensus 68 ------g~~~~~v----------------------------~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 68 ------GSALEHV----------------------------VEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp ------SCSCEEE----------------------------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred ------CCCcEEE----------------------------EeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 0000000 000112345677877777676 54556788898886554
Q ss_pred ccccc-cCCCCeeEEEECCCCCEEEEEEcC-CceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEE
Q 014302 270 SEPWS-STSGFVTGATWDPEGRMILLAFAG-SLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERL 347 (427)
Q Consensus 270 ~~~~~-~~~~~v~~v~~spdg~~l~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~L 347 (427)
...+. ..-.....+++.|...+|+.+... ...|....+...... .....-.....|+++++++.|
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-------------~l~~~~~~P~GlalD~~~~~L 180 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-------------TLVPNVGRANGLTIDYAKRRL 180 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-------------EEECSCSSEEEEEEETTTTEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-------------EEECCCCCcceEEEccccCEE
Confidence 33332 344557899999976677766533 345666555443110 001122367899999998888
Q ss_pred EEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEEeeCceEEEEe
Q 014302 348 AVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVCWSSGFCCTYP 418 (427)
Q Consensus 348 a~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~~~~g~i~~~~ 418 (427)
.++ +... +.|..+++...... +. .. ....|..+++.. +.+...-|..+.|..++
T Consensus 181 Y~a--D~~~---~~I~~~d~dG~~~~-v~-----~~--~l~~P~glav~~----~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 181 YWT--DLDT---NLIESSNMLGLNRE-VI-----AD--DLPHPFGLTQYQ----DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEE--ETTT---TEEEEEETTSCSCE-EE-----EE--CCSCEEEEEEET----TEEEEEETTTTEEEEEE
T ss_pred EEE--ECCC---CEEEEEcCCCCceE-Ee-----ec--cCCCceEEEEEC----CEEEEecCCCCEEEEEE
Confidence 886 3333 46999998664432 21 11 112356666643 45666667777777766
No 285
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.15 E-value=0.7 Score=42.09 Aligned_cols=137 Identities=14% Similarity=0.169 Sum_probs=71.4
Q ss_pred CCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccce
Q 014302 248 GDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIV 327 (427)
Q Consensus 248 g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (427)
+..++.++.++.+..+|.++++.. +.........+.. ++..+++++. ++.+..++..+..........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~-w~~~~~~~~~~~~--~~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~-------- 306 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIM-WKRELGSVNDFIV--DGNRIYLVDQ-NDRVMALTIDGGVTLWTQSDL-------- 306 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEE-EEECCCCEEEEEE--ETTEEEEEET-TCCEEEEETTTCCEEEEECTT--------
T ss_pred CCEEEEEecCcEEEEEECCCCcEE-eeccCCCCCCceE--ECCEEEEEcC-CCeEEEEECCCCcEEEeeccc--------
Confidence 456777788999999999887753 2212223334443 3555655544 346666666554211110000
Q ss_pred eeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEE
Q 014302 328 SLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSV 407 (427)
Q Consensus 328 ~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v 407 (427)
....+..+.. .+..|.+ ++.+ |.|+++|.++++.+...... +......+. . .+..|-+
T Consensus 307 ---~~~~~~~~~~--~~~~l~v---~~~~---g~l~~~d~~tG~~~~~~~~~---~~~~~~~~~---~-----~~~~l~v 364 (376)
T 3q7m_A 307 ---LHRLLTSPVL--YNGNLVV---GDSE---GYLHWINVEDGRFVAQQKVD---SSGFQTEPV---A-----ADGKLLI 364 (376)
T ss_dssp ---TTSCCCCCEE--ETTEEEE---ECTT---SEEEEEETTTCCEEEEEECC---TTCBCSCCE---E-----ETTEEEE
T ss_pred ---CCCcccCCEE--ECCEEEE---EeCC---CeEEEEECCCCcEEEEEecC---CCcceeCCE---E-----ECCEEEE
Confidence 0001122222 2456655 4444 67999999998875332210 001111111 1 1335778
Q ss_pred EeeCceEEEEe
Q 014302 408 CWSSGFCCTYP 418 (427)
Q Consensus 408 ~~~~g~i~~~~ 418 (427)
+..+|.|..|+
T Consensus 365 ~~~~G~l~~~~ 375 (376)
T 3q7m_A 365 QAKDGTVYSIT 375 (376)
T ss_dssp EBTTSCEEEEE
T ss_pred EeCCCEEEEEe
Confidence 88899998875
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.06 E-value=1.3 Score=43.75 Aligned_cols=198 Identities=7% Similarity=-0.013 Sum_probs=116.1
Q ss_pred ceeeeEEcCCCCEEEEE-eCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFI-SGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~ 178 (427)
.+.+|+|++.+..|..+ ..++.|+.++++.. ....+..........+++.+.+.+++.+-.. +.|.+.+++
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~--~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d----- 110 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGS--ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD----- 110 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCC--CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC-----
Confidence 57899999977766554 45788888887654 2222222222356778888776566555443 667777665
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec--
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF-- 256 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-- 256 (427)
+.....+ +.........+++.|...+|+....
T Consensus 111 ------------------G~~~~~l----------------------------~~~~l~~P~~iavdp~~G~lY~tD~g~ 144 (628)
T 4a0p_A 111 ------------------GQHRQVL----------------------------VWKDLDSPRALALDPAEGFMYWTEWGG 144 (628)
T ss_dssp ------------------STTCEEE----------------------------ECSSCCCEEEEEEETTTTEEEEEECSS
T ss_pred ------------------CCcEEEE----------------------------EeCCCCCcccEEEccCCCeEEEeCCCC
Confidence 0000000 0001123567888887667775442
Q ss_pred CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCcee
Q 014302 257 DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIE 336 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 336 (427)
.+.|...++.......+.........+++++++..|+.+......|..+++......+ . ........
T Consensus 145 ~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v----~---------~~~l~~P~ 211 (628)
T 4a0p_A 145 KPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREV----I---------ADDLPHPF 211 (628)
T ss_dssp SCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE----E---------EECCSCEE
T ss_pred CCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEE----e---------eccCCCce
Confidence 4677777776555444444556788999999999998887777788888775532111 0 00112445
Q ss_pred EEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 337 KIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 337 ~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
.|++.. ..|..+ +... +.|...|..++.
T Consensus 212 glav~~--~~ly~t--D~~~---~~I~~~dk~tg~ 239 (628)
T 4a0p_A 212 GLTQYQ--DYIYWT--DWSR---RSIERANKTSGQ 239 (628)
T ss_dssp EEEEET--TEEEEE--ETTT---TEEEEEETTTCC
T ss_pred EEEEEC--CEEEEe--cCCC---CEEEEEECCCCC
Confidence 677654 355553 3322 457777765543
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.06 E-value=0.35 Score=45.42 Aligned_cols=72 Identities=13% Similarity=0.043 Sum_probs=42.5
Q ss_pred eeeeEEcC-CCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEec-CCeEEEEecc
Q 014302 102 LQGVSWHQ-HKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGC-KGGICIWAPS 173 (427)
Q Consensus 102 V~~l~~sp-~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~-~~~i~iw~~~ 173 (427)
...++++| +|.+.++-..++.|+.++...+.........+....-..++|+|++..++++-. .+.|..++.+
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 46788999 666555555678888877664411011111222222346999999953544443 3777777765
No 288
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.04 E-value=0.076 Score=53.30 Aligned_cols=85 Identities=9% Similarity=0.156 Sum_probs=47.3
Q ss_pred CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCcee
Q 014302 257 DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIE 336 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 336 (427)
+|.|+.||+.+++..-...+........++..+..++++ ..++.++.++..+.+...+. .+..+....
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw~~-----------~~~~~~~~~ 521 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLWEQ-----------PAASGVMAA 521 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEE-----------ECSSCCCSC
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCccceee-----------eCCCCcccC
Confidence 377999999988763322222333333555567777766 55668888887765321100 000111223
Q ss_pred EEEECCCCCEEEEEEec
Q 014302 337 KIAWDASGERLAVSYKG 353 (427)
Q Consensus 337 ~v~~sp~g~~La~~~~~ 353 (427)
-+.|..+|+..++...|
T Consensus 522 p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 522 PVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp CEEEEETTEEEEEEEEC
T ss_pred ceEEEECCEEEEEEEec
Confidence 46777888866654444
No 289
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.04 E-value=0.29 Score=40.88 Aligned_cols=148 Identities=12% Similarity=0.158 Sum_probs=80.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcc-------eeecc-CCcCCeeEEEEccCCCceEEEecCCeEEEEec
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDA-------CILTS-DSQRDVKVLEWRPNGGRSLSVGCKGGICIWAP 172 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~-------~~~~~-~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~ 172 (427)
.++.++|+|+|.+.|+ .+|. ||..+...... ..+-. +-. ...++.|.|+| .+.++ .++.|.-++-
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G-~LYav-~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNG-YLYAV-SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTE--EEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTS-CEEEE-ETTEEEEESC
T ss_pred cceeEEECCCccEEEE--eCCe--EEEECCCCCCcccccccccEecccccc-cceEEEECCCC-CEEEe-CCCEEEEeCC
Confidence 5679999999997777 5666 45454431111 11101 111 14789999999 67777 6676654442
Q ss_pred cCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEe-ccCCeEEEEEccCCCEE
Q 014302 173 SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRR-GFGGLSILKWSPTGDYF 251 (427)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-~~~~v~~~~~sp~g~~l 251 (427)
. .+ -+..++..+..+-. .-..+..+.+.|+|...
T Consensus 115 P--~~-------------------------------------------~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Ly 149 (236)
T 1tl2_A 115 P--QS-------------------------------------------DTDNWIARATEVGSGGWSGFKFLFFHPNGYLY 149 (236)
T ss_dssp C--CS-------------------------------------------TTCCHHHHSEEEECSSGGGEEEEEECTTSCEE
T ss_pred C--cC-------------------------------------------CCCceeccccEeccCCCCceEEEEECCCceEE
Confidence 1 00 01122222222222 23567889999999877
Q ss_pred EEEecCCcEEEEEcCCCCccccc--------cCCCCeeEEEECCCCCEEEEEEcCCceeeee
Q 014302 252 FAAKFDGTFYLWETNTWTSEPWS--------STSGFVTGATWDPEGRMILLAFAGSLTLGSI 305 (427)
Q Consensus 252 ~~~~~dg~v~iwd~~~~~~~~~~--------~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~ 305 (427)
++. |+.++-+...+.....+. ..-....-+.|.++|...++. ++.++..
T Consensus 150 av~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~---~g~~Y~~ 206 (236)
T 1tl2_A 150 AVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ---GGKFYED 206 (236)
T ss_dssp EEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE---TTEEEEE
T ss_pred EEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe---CCeEEec
Confidence 766 777554433333322222 111233456799999887754 3344443
No 290
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.01 E-value=0.86 Score=41.36 Aligned_cols=61 Identities=7% Similarity=-0.028 Sum_probs=36.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCccee----eccCCcCCeeEEEEccC---CCceEEE
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACI----LTSDSQRDVKVLEWRPN---GGRSLSV 161 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~----~~~~~~~~v~~l~~sp~---~~~~la~ 161 (427)
....|+|.|+|++|.++...+.|++++.+........ ...........++|+|+ +..++++
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 3578999999984445567899988764322100000 11122346789999996 3344444
No 291
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.00 E-value=1.6 Score=44.34 Aligned_cols=233 Identities=12% Similarity=0.061 Sum_probs=124.6
Q ss_pred CCCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceee------------ccCCcCCeeEEEEccCCCceEEEecCC
Q 014302 98 PEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACIL------------TSDSQRDVKVLEWRPNGGRSLSVGCKG 165 (427)
Q Consensus 98 ~~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~------------~~~~~~~v~~l~~sp~~~~~la~g~~~ 165 (427)
....|.++...++|.+. .|+..+-+.+++........... ..-....|.++...++| .+-+...++
T Consensus 256 ~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g-~lWigt~~~ 333 (781)
T 3v9f_A 256 LSSYIFSIKQLKDNKLW-IATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN-NIWIGTWGG 333 (781)
T ss_dssp CCCCEEEEEECTTSEEE-EEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSC-CEEEEEBSS
T ss_pred cCceEEEEEECCCCCEE-EEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC-CEEEEecCC
Confidence 34478999988888744 35554556677766541111100 01134568899888887 555555567
Q ss_pred eEEEEeccCCCCccccccCcccccccccCCCCcceeEeeh------hcccCCCceeeeEeCCCCCC-ccc--Cce-----
Q 014302 166 GICIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDF------LRSQNGEQITALSWGPDGRF-PGL--GTP----- 231 (427)
Q Consensus 166 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~spdg~~-l~~--~~~----- 231 (427)
+|..++..... +..... ...-....|.++...++|.+ +++ +..
T Consensus 334 Gl~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~ 390 (781)
T 3v9f_A 334 GINFISNAPPT-----------------------FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFEN 390 (781)
T ss_dssp CEEEECSSCCS-----------------------CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEET
T ss_pred eEEEeCCCCCc-----------------------ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEEC
Confidence 88888765110 000000 00001234555655555543 221 000
Q ss_pred ----EE-------eccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc---cCCCCeeEEEECCCCCEEEEEEc
Q 014302 232 ----IR-------RGFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---STSGFVTGATWDPEGRMILLAFA 297 (427)
Q Consensus 232 ----~~-------~~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~v~~v~~spdg~~l~~~~~ 297 (427)
+. .....|.++...++|.. ..|+.++.|..+|.++++...+. .....|.++...++|...+ ++.
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~ 468 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH 468 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET
T ss_pred CCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC
Confidence 11 12245778887777764 44666677889988766543332 2346788999888887665 444
Q ss_pred CCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 298 GSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 298 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
. -+..++..... +..... .. ... .....|.++..+++|...+.+. +. | |..|+..++...
T Consensus 469 -~-Gl~~~~~~~~~--~~~~~~-~~---~~~-~~~~~i~~i~~d~~g~lWigt~--~~----G-l~~~~~~~~~~~ 528 (781)
T 3v9f_A 469 -A-GVFVIDLASKK--VIHHYD-TS---NSQ-LLENFVRSIAQDSEGRFWIGTF--GG----G-VGIYTPDMQLVR 528 (781)
T ss_dssp -T-EEEEEESSSSS--CCEEEC-TT---TSS-CSCSCEEEEEECTTCCEEEEES--SS----C-EEEECTTCCEEE
T ss_pred -C-ceEEEeCCCCe--EEeccc-Cc---ccc-cccceeEEEEEcCCCCEEEEEc--CC----C-EEEEeCCCCeEE
Confidence 3 35555543321 110000 00 000 0124789999999998776642 11 1 778887665543
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.99 E-value=0.81 Score=40.83 Aligned_cols=118 Identities=15% Similarity=0.126 Sum_probs=69.7
Q ss_pred eEEEEE---ccCCCEEEEEe-------------cCCcEEEEEcC---CCCccccc-------c-------CCCCeeEEEE
Q 014302 239 LSILKW---SPTGDYFFAAK-------------FDGTFYLWETN---TWTSEPWS-------S-------TSGFVTGATW 285 (427)
Q Consensus 239 v~~~~~---sp~g~~l~~~~-------------~dg~v~iwd~~---~~~~~~~~-------~-------~~~~v~~v~~ 285 (427)
+..+.| .|+++++++.. .+..|..||+. +++..... . .......++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 356777 57766666433 26779999998 66553222 1 1235789999
Q ss_pred CCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEE
Q 014302 286 DPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIY 365 (427)
Q Consensus 286 spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vw 365 (427)
.++|+..++.+..-+.|+.++-..+... ++.+... .....-..+.++++|+|..|++. .+ . |.|..+
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~------~~~~~~~-~~~~~~G~nGIv~~pdg~~Liv~--~~-~---g~L~~f 211 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGKTVS------TFAWESG-NGGQRPGYSGITFDPHSNKLIAF--GG-P---RALTAF 211 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSCCEE------EEEECCC-CSSSCCSCSEEEEETTTTEEEEE--SS-S---SSEEEE
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCCEEe------eeeecCC-CcccccCcceEEEeCCCCEEEEE--cC-C---CeEEEE
Confidence 9999988766544135554444332111 0000000 00011146799999999999985 33 3 559999
Q ss_pred Eecc
Q 014302 366 DARR 369 (427)
Q Consensus 366 d~~~ 369 (427)
|+..
T Consensus 212 D~~~ 215 (334)
T 2p9w_A 212 DVSK 215 (334)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 9874
No 293
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.78 E-value=0.12 Score=43.14 Aligned_cols=101 Identities=17% Similarity=0.243 Sum_probs=63.5
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCe--------eEEEECCCCCEEEEEEcCCceeeeeeeC
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFV--------TGATWDPEGRMILLAFAGSLTLGSIHFA 308 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v--------~~v~~spdg~~l~~~~~~~~~i~~~~~~ 308 (427)
..+..++|+|+|.+.++ .+|.++-.+..+.....+......| .++.|.|+|.+.++ .+ +.|+.++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~d-G~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SK-DKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ET-TEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CC-CEEEEeCCC
Confidence 46779999999885556 6787777776665555555334444 78999999988776 33 577766432
Q ss_pred CCC-CCccccccccccccceeec--cCCceeEEEECCCCCEEEEE
Q 014302 309 SKP-PSLDAHLLPVDLPDIVSLT--GSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 309 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~i~~v~~sp~g~~La~~ 350 (427)
+.. ...-.. ...+. +-..+..|.|+|+|...|+.
T Consensus 116 ~~~~~~Wl~~--------a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 116 QSDTDNWIAR--------ATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CSTTCCHHHH--------SEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred cCCCCceecc--------ccEeccCCCCceEEEEECCCceEEEEe
Confidence 211 011000 00111 11268999999999999883
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.70 E-value=2.1 Score=43.43 Aligned_cols=230 Identities=13% Similarity=0.084 Sum_probs=123.7
Q ss_pred CCCCceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeec---------cCCcCCeeEEEEccCCCceEEEecCCeE
Q 014302 97 LPEVDLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILT---------SDSQRDVKVLEWRPNGGRSLSVGCKGGI 167 (427)
Q Consensus 97 l~~~~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~---------~~~~~~v~~l~~sp~~~~~la~g~~~~i 167 (427)
+....|.++...++|.+- .|+.++-|..++.... ...... .-....|.++...++| .+.+....+++
T Consensus 310 l~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWigt~~~Gl 385 (781)
T 3v9f_A 310 LSNASARYIFQDSFNNIW-IGTWGGGINFISNAPP--TFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLWIGTDGGGI 385 (781)
T ss_dssp BSSSCEEEEEECSSCCEE-EEEBSSCEEEECSSCC--SCEEEC----CCCSSCCSSSCEEEEEECTTS-CEEEEEBSSCE
T ss_pred CCCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCC--cceeeccCccccccCCCCCcceEEEEEcCCC-CEEEEeCCCcE
Confidence 344579999999988744 4555666767765544 111111 1123568899888877 55555546778
Q ss_pred EEEeccCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCC-cccC-----------ceEEe-
Q 014302 168 CIWAPSYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRF-PGLG-----------TPIRR- 234 (427)
Q Consensus 168 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~-----------~~~~~- 234 (427)
..|+.. ++ .+.............|.++...++|.+ +++. ..+..
T Consensus 386 ~~~~~~---------~~--------------~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 386 NVFENG---------KR--------------VAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQII 442 (781)
T ss_dssp EEEETT---------EE--------------EEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEEC
T ss_pred EEEECC---------CC--------------eEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEe
Confidence 888865 11 000000000011344555555555543 1110 11111
Q ss_pred -----ccCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcccccc------CCCCeeEEEECCCCCEEEEEEcCCceee
Q 014302 235 -----GFGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSS------TSGFVTGATWDPEGRMILLAFAGSLTLG 303 (427)
Q Consensus 235 -----~~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~------~~~~v~~v~~spdg~~l~~~~~~~~~i~ 303 (427)
....|.++...++|+ |..|+. +.|..||..+.+...+.. ....|.++...++|+..+. +.+.+ +.
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~G-l~ 518 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGG-VG 518 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSC-EE
T ss_pred ccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCC-EE
Confidence 124577888877776 444554 668899987765433321 1467889999999987764 44332 33
Q ss_pred eeeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 304 SIHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.++.... .+.. .. ....+ ....|.++..+++|...+.+ . . |.|..||.+++...
T Consensus 519 ~~~~~~~--~~~~----~~--~~~~l-~~~~i~~i~~d~~g~lWi~T--~--~---Glv~~~d~~~~~~~ 572 (781)
T 3v9f_A 519 IYTPDMQ--LVRK----FN--QYEGF-CSNTINQIYRSSKGQMWLAT--G--E---GLVCFPSARNFDYQ 572 (781)
T ss_dssp EECTTCC--EEEE----EC--TTTTC-SCSCEEEEEECTTSCEEEEE--T--T---EEEEESCTTTCCCE
T ss_pred EEeCCCC--eEEE----cc--CCCCC-CCCeeEEEEECCCCCEEEEE--C--C---CceEEECCCCCcEE
Confidence 3332221 1100 00 00000 12368999999999877663 2 2 44488888776644
No 295
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.67 E-value=0.75 Score=40.75 Aligned_cols=105 Identities=12% Similarity=0.193 Sum_probs=57.9
Q ss_pred EEccCCCEEEEEec-CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCccccccc
Q 014302 243 KWSPTGDYFFAAKF-DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSLDAHLLP 320 (427)
Q Consensus 243 ~~sp~g~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~~~~~~~ 320 (427)
+++++++.|+-.+. ...|.+.++.......+.. +.... .++|++.+|+.....+ ..|...++.....
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~~-~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-------- 219 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCYK-PVVLDDTNVYYMDVNRDNAIVHVNINNPNP-------- 219 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEEE-EEEEETTEEEEEEGGGTTEEEEECSSSCCC--------
T ss_pred EeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCccc-eeeecCCEEEEEEcCCCcEEEEEECCCCCe--------
Confidence 45778888884443 5667777776555433322 22222 3559999999876544 3566665554311
Q ss_pred cccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCc
Q 014302 321 VDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTP 371 (427)
Q Consensus 321 ~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~ 371 (427)
..+. ...+ ..|+|++++|..+..+.. ..|..-++....
T Consensus 220 ------~~Lt-~~~~--~~~~~~g~~Iy~~~~~~~----~~i~~~~~DG~~ 257 (302)
T 3s25_A 220 ------VVLT-EANI--EHYNVYGSLIFYQRGGDN----PALCVVKNDGTG 257 (302)
T ss_dssp ------EECS-CSCE--EEEEEETTEEEEEECSSS----CEEEEEETTSCC
T ss_pred ------EEEe-CCCc--ceEEECCCEEEEEECCCC----cEEEEEECCCCc
Confidence 0111 1122 347888999876422222 346666665433
No 296
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.62 E-value=0.28 Score=44.65 Aligned_cols=111 Identities=14% Similarity=0.217 Sum_probs=58.3
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcccc-------ccCCCCeeEEEECCC---CCEEEEEEcC-------C
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW-------SSTSGFVTGATWDPE---GRMILLAFAG-------S 299 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~-------~~~~~~v~~v~~spd---g~~l~~~~~~-------~ 299 (427)
...+.|+|.|+|++|+++...|.|++++........+ .........++|+|+ +..|+++... .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 4567899999998455556689999998532211111 123456789999996 5555544332 2
Q ss_pred ceeeeeeeCCCCCCcccccccc-ccccceeeccCCceeEEEECCCCCEEEE
Q 014302 300 LTLGSIHFASKPPSLDAHLLPV-DLPDIVSLTGSQGIEKIAWDASGERLAV 349 (427)
Q Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~La~ 349 (427)
..|..+.+......+......+ .++......| ....|+|+|||.++++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h--~~~~l~~~pdG~Lyv~ 146 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH--FGGRLVFDGKGYLFIA 146 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSC--CCCCEEECSSSEEEEE
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcc--cCccEEECCCCcEEEE
Confidence 2455555543222221111000 0110000011 2467999999955544
No 297
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.18 E-value=1.6 Score=38.66 Aligned_cols=63 Identities=6% Similarity=0.042 Sum_probs=37.5
Q ss_pred EccCCCEEEEEecC--CcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEc-CCceeeeeeeCCC
Q 014302 244 WSPTGDYFFAAKFD--GTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFA-GSLTLGSIHFASK 310 (427)
Q Consensus 244 ~sp~g~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~-~~~~i~~~~~~~~ 310 (427)
++|++++|+-.... ..|..-++.......+. ...+ ..|+|++++|+.+.. ....|..+++...
T Consensus 191 ~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 191 VVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEECSSSCCCEECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred eeecCCEEEEEEcCCCcEEEEEECCCCCeEEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 56999999854433 24555555554443333 2223 458899999987643 2346666666553
No 298
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.03 E-value=1.7 Score=40.88 Aligned_cols=54 Identities=11% Similarity=0.235 Sum_probs=32.7
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeecc------CCcCCeeEEEEccC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTS------DSQRDVKVLEWRPN 154 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~------~~~~~v~~l~~sp~ 154 (427)
....|+|.|+|+++++-...+.|++++...+......... ........|+|+|+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 4579999999987776544457777654333111111111 12456789999995
No 299
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.74 E-value=2.3 Score=38.46 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=37.1
Q ss_pred CeEEEEE-------ccCCCEEEEEecCCcEEEEEcCCCC-c---cccc-cCCCCeeEEEECCCCCEEEEE
Q 014302 238 GLSILKW-------SPTGDYFFAAKFDGTFYLWETNTWT-S---EPWS-STSGFVTGATWDPEGRMILLA 295 (427)
Q Consensus 238 ~v~~~~~-------sp~g~~l~~~~~dg~v~iwd~~~~~-~---~~~~-~~~~~v~~v~~spdg~~l~~~ 295 (427)
....++| ..+|+++++.-..+.|...++.... . ..+. .....+..+++.|||..+++.
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 4556677 3567666666666778888876432 1 1222 234578999999999766554
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.71 E-value=0.92 Score=41.15 Aligned_cols=57 Identities=16% Similarity=0.112 Sum_probs=34.9
Q ss_pred eEEEEEccCCCEEEEEecCCcEEEEEcCCCCc-------cccccCCCCeeEEEECCCCCEEEEEE
Q 014302 239 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTS-------EPWSSTSGFVTGATWDPEGRMILLAF 296 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~v~~v~~spdg~~l~~~~ 296 (427)
...++| .+|..+++.-..+.|...++..... ..+......+..+++.|||..+++..
T Consensus 270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 345556 4565555555566777777654331 22223346789999999998776543
No 301
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.56 E-value=0.38 Score=48.18 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=37.4
Q ss_pred EEEccCCCEEEEEecCCcEEEEEcCCCCccc-cc-cCCCCeeEEEECCCCCEEEE
Q 014302 242 LKWSPTGDYFFAAKFDGTFYLWETNTWTSEP-WS-STSGFVTGATWDPEGRMILL 294 (427)
Q Consensus 242 ~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~-~~-~~~~~v~~v~~spdg~~l~~ 294 (427)
..+...+..+++++.||.|+.||.++++..- +. .......-+.|+.+|+..+.
T Consensus 480 g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 480 GTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 3566678899999999999999999998742 22 33333345677788875443
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.53 E-value=4 Score=40.18 Aligned_cols=157 Identities=9% Similarity=0.044 Sum_probs=92.6
Q ss_pred ceeeeEEcCCCCEEEEEe-CCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecC-CeEEEEeccCCCCc
Q 014302 101 DLQGVSWHQHKHIVAFIS-GSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCK-GGICIWAPSYPGNA 178 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~-~~i~iw~~~~~~~~ 178 (427)
.+.+|+|++.+..|..+. ..+.|..++++......... .........+++.+.+.+++.+-.. +.|.+.+++
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~-~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d----- 114 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV-VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD----- 114 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEE-eCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC-----
Confidence 578999999777666554 46788888876542112222 2222467889999876566655543 778777775
Q ss_pred cccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEEEEec--
Q 014302 179 ASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKF-- 256 (427)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~-- 256 (427)
+.....+ - .........+++.|.+.+|+.+..
T Consensus 115 ------------------G~~~~~l---~-------------------------~~~l~~P~~Iavdp~~g~ly~tD~g~ 148 (619)
T 3s94_A 115 ------------------GSLRKVL---F-------------------------WQELDQPRAIALDPSSGFMYWTDWGE 148 (619)
T ss_dssp ------------------SCSCEEE---E-------------------------CSSCSCCCCEEEETTTTEEEEEECSS
T ss_pred ------------------CCCEEEE---E-------------------------eCCCCCCceEEEecCCCeEEEeccCC
Confidence 0000000 0 001123456788887666664443
Q ss_pred CCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCC
Q 014302 257 DGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFAS 309 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~ 309 (427)
.+.|...++.......+. ..-.....+++++++..|+.+-.....|..+++..
T Consensus 149 ~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 149 VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp SCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred CCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 356666666543333332 33456789999998888888776666777776654
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.45 E-value=2.7 Score=37.90 Aligned_cols=54 Identities=7% Similarity=0.057 Sum_probs=35.1
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCccee----eccCCcCCeeEEEEccC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACI----LTSDSQRDVKVLEWRPN 154 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~----~~~~~~~~v~~l~~sp~ 154 (427)
.-..|+|.|+|.++++-...|.|++++...+...... ...........|+++|+
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 3578999999997776654899888764433111111 11223557899999996
No 304
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.92 E-value=5 Score=39.01 Aligned_cols=21 Identities=5% Similarity=0.040 Sum_probs=16.6
Q ss_pred CCEEEEEeCCCeEEEEEccCC
Q 014302 111 KHIVAFISGSTQVIVRDYEDS 131 (427)
Q Consensus 111 g~~lat~~~d~~v~vwd~~~~ 131 (427)
+..|++++.|+.+..+|..++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG 135 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTG 135 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEECCCC
Confidence 557777888899988887776
No 305
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.44 E-value=6.7 Score=38.94 Aligned_cols=21 Identities=14% Similarity=-0.001 Sum_probs=17.1
Q ss_pred CCEEEEEeCCCeEEEEEccCC
Q 014302 111 KHIVAFISGSTQVIVRDYEDS 131 (427)
Q Consensus 111 g~~lat~~~d~~v~vwd~~~~ 131 (427)
+..|++++.|+.+..+|..++
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG 137 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTG 137 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEcCCCEEEEEECCCC
Confidence 557778888999999888776
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.11 E-value=4.5 Score=36.01 Aligned_cols=209 Identities=12% Similarity=0.184 Sum_probs=112.9
Q ss_pred eeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcccccc
Q 014302 104 GVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRS 183 (427)
Q Consensus 104 ~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~ 183 (427)
+.-.||..+.||.-. ..+++|+|++.. .....+.....|.--.|-.+ ..|+--.+..|.-|++.-..
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK---~klks~~~~e~VvfWkWis~--~~L~lVT~taVyHWs~~~~s------- 137 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMK---SKMKAHTMTDDVTFWKWISL--NTVALVTDNAVYHWSMEGES------- 137 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTT---EEEEEEECSSCEEEEEECSS--SEEEEEESSEEEEEESSTTC-------
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHh---hhhcceecCCccEEEEecCC--CeEEEEcCCcEEEEcccCCC-------
Confidence 344599999888765 789999999987 33333344567877777755 56776677889999986100
Q ss_pred CcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEe------c
Q 014302 184 GAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAK------F 256 (427)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~------~ 256 (427)
.+...++.|.. + ....|.....+++.++++ +|- -
T Consensus 138 -----------------~P~kvFdR~~~--------------------L--~~~QIInY~~d~~~kW~~l~GI~~~~~~v 178 (365)
T 2xzh_A 138 -----------------QPVKMFDRHSS--------------------L--AGCQIINYRTDAKQKWLLLTGISAQQNRV 178 (365)
T ss_dssp -----------------CCEEEEECCGG--------------------G--TTCEEEEEEECTTSCEEEEEEEEEETTEE
T ss_pred -----------------CCceeeecchh--------------------c--ccceEEEEEECCCCCEEEEEeEeccCCcc
Confidence 11111211100 0 011233444555555555 221 2
Q ss_pred CCcEEEEEcCCCCccccccCCCCeeEEEEC--CC-CCEEEEEEcC--CceeeeeeeCCCC---CCcccccccccccccee
Q 014302 257 DGTFYLWETNTWTSEPWSSTSGFVTGATWD--PE-GRMILLAFAG--SLTLGSIHFASKP---PSLDAHLLPVDLPDIVS 328 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~~~~~~v~~v~~s--pd-g~~l~~~~~~--~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~ 328 (427)
.|.+.+|..+........+|...-..+... +. .+.++++... ++.+.++.+.... +.+......+-++..
T Consensus 179 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe-- 256 (365)
T 2xzh_A 179 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-- 256 (365)
T ss_dssp EEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT--
T ss_pred ceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc--
Confidence 366889988776666665664433222221 11 1233333332 2577888875431 112111111101100
Q ss_pred eccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 329 LTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 329 ~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
...+-.-+|..|+.-..+.+.... |.|++||++++.++
T Consensus 257 -a~~DFPVamqvs~kygviyviTK~------G~ihlyDleTgt~i 294 (365)
T 2xzh_A 257 -AQNDFPVAMQISEKHDVVFLITKY------GYIHLYDLETGTCI 294 (365)
T ss_dssp -CTTCCEEEEEEETTTTEEEEEETT------SEEEEEETTTCCEE
T ss_pred -ccCCceEEEEecccCCEEEEEeCC------cEEEEEEcccCcEE
Confidence 012234567777766666664333 66999999999987
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.00 E-value=5.6 Score=36.79 Aligned_cols=162 Identities=12% Similarity=0.044 Sum_probs=88.4
Q ss_pred EccCCCEEEEEecCCcEEEEEcCCCCccccc--c---CCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccc
Q 014302 244 WSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--S---TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHL 318 (427)
Q Consensus 244 ~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~---~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~ 318 (427)
...+|..++..- ++.||.-++......+.. . .-..+..+..||+|++||..+.. .+.++.+...........
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~--~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN--EIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS--EEEEEECCTTCSCCCCHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC--eEEEEEecCccccCcccc
Confidence 345666666554 688888887754332222 2 12367889999999999986433 566777764311111000
Q ss_pred --ccc-----ccccceeeccCCceeEEEECCC---CCEEEEEEecCCCcceeEEEEEEeccCce--EEE-eeeeeeeCCC
Q 014302 319 --LPV-----DLPDIVSLTGSQGIEKIAWDAS---GERLAVSYKGGDDIYKGLIAIYDARRTPL--ISL-SLIGFIRGPG 385 (427)
Q Consensus 319 --~~~-----~~~~~~~~~~~~~i~~v~~sp~---g~~La~~~~~~~d~~~g~i~vwd~~~~~~--~~~-~~~~~~~~~~ 385 (427)
.++ .+.... .....+|..+.|+|- +..|++-.. | ++|++||+....- ..+ ...+.+....
T Consensus 105 ~~~~~q~~ty~l~~~~-~~~~s~I~qVlWHPl~~~ds~LVVLts---D---~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~ 177 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEE-VGPKSSIKKVLFHPKSYRDSCIVVLKE---D---DTITMFDILNSQEKPIVLNKPNNSFGLDA 177 (452)
T ss_dssp HHHTTEEEEEEGGGCC---CCCCEEEEEECTTBGGGCEEEEEET---T---SCEEEEETTCTTSCCEEESCCCSEEESCS
T ss_pred cccccceeEEEcCCcc-cCCCCceeEEEeccccCCCCeEEEEec---C---CEEEEEEcccCCCCCcchhccccccCCCc
Confidence 111 111110 112458999999985 456777422 2 4599999975211 111 1111111111
Q ss_pred CCCCceeEEeccCCCCCceeEEEe--eCceEEEEe
Q 014302 386 DNPKPVAFSFHDKFKQGPLLSVCW--SSGFCCTYP 418 (427)
Q Consensus 386 ~~~~~~~~~f~~~~~~g~~l~v~~--~~g~i~~~~ 418 (427)
....+.+++|.+ ++..|-+.. ..|.|.-+-
T Consensus 178 ~~~ev~S~~Fg~---~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 178 RVNDITDLEFSK---DGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp SCCCEEEEEECT---TSSCEEEEECTTSCEEEEES
T ss_pred ccceEEEEEEcC---CCcEEEEEecCCCCCEEEEC
Confidence 224466888887 366677755 567775443
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.88 E-value=5.1 Score=36.02 Aligned_cols=145 Identities=14% Similarity=0.135 Sum_probs=77.3
Q ss_pred CCcEEEEEcC--CCCccccc------cCC-CCeeEEEE--CCC-CCEEEEEEcCCceeeeeeeCCC-CCCcccccccccc
Q 014302 257 DGTFYLWETN--TWTSEPWS------STS-GFVTGATW--DPE-GRMILLAFAGSLTLGSIHFASK-PPSLDAHLLPVDL 323 (427)
Q Consensus 257 dg~v~iwd~~--~~~~~~~~------~~~-~~v~~v~~--spd-g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~ 323 (427)
+++|.+|++. +....... ... ..+..+|+ +|. +++.++....++.+.+|.+... .......
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~------ 171 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGK------ 171 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEE------
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccce------
Confidence 5789999774 33321111 112 56777888 774 5555566677778888888653 1112111
Q ss_pred ccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec-----cCceEEEeeeeeeeCCCCCCCceeEEeccC
Q 014302 324 PDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR-----RTPLISLSLIGFIRGPGDNPKPVAFSFHDK 398 (427)
Q Consensus 324 ~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 398 (427)
....+...+.+..|+.++...+|.+ +.++. | |..++.+ +..++.... .......+-.++..+.
T Consensus 172 -lVR~f~lgsq~EgcvvDd~~g~Lyv---~eEd~--G-Iw~~da~p~~~~~~~~v~~~~-----~g~l~aDvEGLai~~~ 239 (355)
T 3amr_A 172 -KVRAFKMNSQTEGMAADDEYGRLYI---AEEDE--A-IWKFSAEPDGGSNGTVIDRAD-----GRHLTRDIEGLTIYYA 239 (355)
T ss_dssp -EEEEEECSSCEEEEEEETTTTEEEE---EETTT--E-EEEEECSTTSCSCCEEEEEBS-----SSSBCSCEEEEEEEEC
T ss_pred -EEEEecCCCCcceEEEcCCCCeEEE---ecccc--e-EEEEeCCcCCCCCceEEEEec-----CCccccCcceEEEEec
Confidence 1223344557889999998888877 55551 2 4444433 122222111 1111112334555332
Q ss_pred C-CCCceeEEEeeCceEEEEec
Q 014302 399 F-KQGPLLSVCWSSGFCCTYPL 419 (427)
Q Consensus 399 ~-~~g~~l~v~~~~g~i~~~~~ 419 (427)
. ..|.|++.+=.+....+|+.
T Consensus 240 ~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 240 ADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp GGGCEEEEEEEGGGTEEEEEES
T ss_pred CCCCEEEEEEcCCCCEEEEEEC
Confidence 1 12445665556778888875
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.68 E-value=1 Score=42.43 Aligned_cols=110 Identities=9% Similarity=0.153 Sum_probs=61.1
Q ss_pred CCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc---------cCCCCeeEEEECCC---CCEEEEEEcC------
Q 014302 237 GGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS---------STSGFVTGATWDPE---GRMILLAFAG------ 298 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~---------~~~~~v~~v~~spd---g~~l~~~~~~------ 298 (427)
...+.|+|.|+|+++++-...+.|++++...+....+. ........++|+|+ +..|+++...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45678999999986666543456888876544432211 13456779999996 5566554432
Q ss_pred ------CceeeeeeeCCCCCCccccccccc-cccceeeccCCceeEEEECCCCCEEEEE
Q 014302 299 ------SLTLGSIHFASKPPSLDAHLLPVD-LPDIVSLTGSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 299 ------~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~La~~ 350 (427)
...|..+.+......+......+. ++. ...+ ....|+|+|||.+.++.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~---~~~H-~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS---SKDH-QSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC---CSSC-CEEEEEECTTSCEEEEE
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCC---CCCC-CCCeEeECCCCeEEEEE
Confidence 224555554432211211111010 110 0111 46899999999877664
No 310
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.68 E-value=1.3 Score=44.08 Aligned_cols=121 Identities=15% Similarity=0.197 Sum_probs=71.8
Q ss_pred EEEEcc-CCCEEEEEecCC-----------cEEEEEcCCCCccccc----cCCCCeeEEEECCCCCEEEEEEcCCceeee
Q 014302 241 ILKWSP-TGDYFFAAKFDG-----------TFYLWETNTWTSEPWS----STSGFVTGATWDPEGRMILLAFAGSLTLGS 304 (427)
Q Consensus 241 ~~~~sp-~g~~l~~~~~dg-----------~v~iwd~~~~~~~~~~----~~~~~v~~v~~spdg~~l~~~~~~~~~i~~ 304 (427)
.+++.+ +++.++.|+.+. .+.+||..+.+-.... .+.....++++..+|+.+++++.....+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556677 787777776543 5889999877653332 233444567888999999988766656666
Q ss_pred eeeCCCCCCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecC-CCc--ceeEEEEEEeccCceEEE
Q 014302 305 IHFASKPPSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGG-DDI--YKGLIAIYDARRTPLISL 375 (427)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~-~d~--~~g~i~vwd~~~~~~~~~ 375 (427)
++..... +. ... ++ .....-.+++..++|+.+++ |+ .+. ....+.+||..++....+
T Consensus 270 yd~~t~~--W~-~~~--~~------~~~R~~~s~~~~~dg~iyv~---GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 270 YDSSSDS--WI-PGP--DM------QVARGYQSSATMSDGRVFTI---GGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp EEGGGTE--EE-ECC--CC------SSCCSSCEEEECTTSCEEEE---CCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred ecCcCCc--ee-ECC--CC------CccccccceEEecCCeEEEE---eCcccCCcccccceEeCCCCCcceeC
Confidence 6654321 00 000 00 00111235566678998888 44 221 113589999988776544
No 311
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.62 E-value=13 Score=40.10 Aligned_cols=208 Identities=11% Similarity=0.170 Sum_probs=111.2
Q ss_pred eEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCccccccC
Q 014302 105 VSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRSG 184 (427)
Q Consensus 105 l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~~ 184 (427)
.-.||..+.||.=. ..+++|+|++.. .....+.....|.--.|-.. ..|+.-.+..|.-|++. +.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k---~klks~~~~e~VvfWkWis~--~~l~lVT~~aVyHW~~~-~~-------- 135 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMK---SKMKAHTMTDDVTFWKWISL--NTVALVTDNAVYHWSME-GE-------- 135 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHh---hhhcccccCCCceEEEecCC--CeeEEEcCCeEEEeccC-CC--------
Confidence 34588888777664 789999999877 22222334456776677654 46666677889999996 10
Q ss_pred cccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EE------ecC
Q 014302 185 AASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AA------KFD 257 (427)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~------~~d 257 (427)
..+...++.+.. + ....|.....+++.++++ +| ...
T Consensus 136 ---------------s~P~k~fdR~~~--------------------L--~~~QIinY~~d~~~kW~~l~gi~~~~~~v~ 178 (1630)
T 1xi4_A 136 ---------------SQPVKMFDRHSS--------------------L--AGCQIINYRTDAKQKWLLLTGISAQQNRVV 178 (1630)
T ss_pred ---------------CccHHHHhcchh--------------------c--ccCeeEEeeeCCCCCeEEEEeeccCCCccc
Confidence 012222222200 0 012344445566666655 22 235
Q ss_pred CcEEEEEcCCCCccccccCCCCeeEEEEC--C-CCCEEEEEEc--CCceeeeeeeCCC---CCCccccccccccccceee
Q 014302 258 GTFYLWETNTWTSEPWSSTSGFVTGATWD--P-EGRMILLAFA--GSLTLGSIHFASK---PPSLDAHLLPVDLPDIVSL 329 (427)
Q Consensus 258 g~v~iwd~~~~~~~~~~~~~~~v~~v~~s--p-dg~~l~~~~~--~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 329 (427)
|.+.+|...........+|.+.-..+... + ....+.++.. .++.+.++.+... .+.+......+.++. .
T Consensus 179 G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~--~- 255 (1630)
T 1xi4_A 179 GAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP--E- 255 (1630)
T ss_pred ceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCc--c-
Confidence 78999998877666665555443333221 1 1223333322 1357778877553 111211111111110 0
Q ss_pred ccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 330 TGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 330 ~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
....-.-+|..|+.-..+.+.... |.|++||+.++.++
T Consensus 256 ~~~Dfpv~~~vs~k~g~iy~itk~------G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 256 AQNDFPVAMQISEKHDVVFLITKY------GYIHLYDLETGTCI 293 (1630)
T ss_pred cccCcceEEEeccccCEEEEEecC------ceEEEEecccchhh
Confidence 011234566777666665553333 66999999998875
No 312
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.39 E-value=2.3 Score=38.38 Aligned_cols=111 Identities=18% Similarity=0.164 Sum_probs=62.8
Q ss_pred cCCeEEEEEccCCCEEEEEecCCcEEEEEcCCCCcccc-------ccCCCCeeEEEECCC---CCEEEEEE--cCCceee
Q 014302 236 FGGLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPW-------SSTSGFVTGATWDPE---GRMILLAF--AGSLTLG 303 (427)
Q Consensus 236 ~~~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~-------~~~~~~v~~v~~spd---g~~l~~~~--~~~~~i~ 303 (427)
....+.|+|.|||+.+++-...|.|++++...++...+ .........++++|+ +..|++.- .....|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 45678999999998666655589999998655443211 134567889999996 44444332 2334555
Q ss_pred eeeeCCCC---CCcccccccc-ccccceeeccCCceeEEEECCCCCEEEEE
Q 014302 304 SIHFASKP---PSLDAHLLPV-DLPDIVSLTGSQGIEKIAWDASGERLAVS 350 (427)
Q Consensus 304 ~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~La~~ 350 (427)
.+.+.... ..+......+ .++. ...+ ....|+|.|||.+.++.
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~---~~~H-~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPK---GVIH-NGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECC---CSSC-CCCCEEECTTSCEEEEC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCC---CCCc-cCccccCCCCCCEEEEE
Confidence 55554421 1111110000 0111 0111 34679999999866663
No 313
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.14 E-value=9.6 Score=37.42 Aligned_cols=118 Identities=8% Similarity=-0.049 Sum_probs=70.9
Q ss_pred CeEEEEEccCCCEEE-EEecCCcEEEEEcCCCCccccc-cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCc
Q 014302 238 GLSILKWSPTGDYFF-AAKFDGTFYLWETNTWTSEPWS-STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSL 314 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~-~~~~dg~v~iwd~~~~~~~~~~-~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~ 314 (427)
....+++.+.++.|+ +-+..+.|.+.++.......+. ..-....++++.|...+|+.+.... ..|....+.......
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~ 472 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVV 472 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEE
Confidence 445778887666666 5555778999888755433332 3345678999999766666654332 455555444321100
Q ss_pred cccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCce
Q 014302 315 DAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPL 372 (427)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~ 372 (427)
. ....-...+.|++++++..|.++ +... +.|..+++.....
T Consensus 473 ---l---------~~~~l~~P~GlalD~~~~~LY~a--D~~~---~~I~~~~~dG~~~ 513 (619)
T 3s94_A 473 ---L---------VNTSLGWPNGLALDYDEGKIYWG--DAKT---DKIEVMNTDGTGR 513 (619)
T ss_dssp ---E---------ECSSCSCEEEEEEETTTTEEEEE--ETTT---TEEEEEESSSCCC
T ss_pred ---E---------EeCCCCCCeeeEEcccCCEEEEE--ECCC---CEEEEEecCCCce
Confidence 0 00011267899999988888875 3333 5688888865443
No 314
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.12 E-value=6.1 Score=35.69 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=40.0
Q ss_pred CCeEEEEEccCCCEEEE-EecCCcEEEEEcCCCC-cc--ccccCCCCeeEEEECC-CCCEEEEEE
Q 014302 237 GGLSILKWSPTGDYFFA-AKFDGTFYLWETNTWT-SE--PWSSTSGFVTGATWDP-EGRMILLAF 296 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~-~~~dg~v~iwd~~~~~-~~--~~~~~~~~v~~v~~sp-dg~~l~~~~ 296 (427)
..-..++||||++.|+. -+..+.|+.|++.... .. ......+..-.++..+ +|++.+++.
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 45678999999998884 4567889999986422 21 1113345567788888 487766443
No 315
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.60 E-value=5.5 Score=39.56 Aligned_cols=53 Identities=9% Similarity=0.172 Sum_probs=32.0
Q ss_pred CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCC
Q 014302 257 DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 310 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~ 310 (427)
+|.|..||+.+++..-............+...|..++++ ..++.++.++....
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKG 489 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTC
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcC
Confidence 478999999888763222222233333344457777766 55568888777654
No 316
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=90.47 E-value=2.3 Score=41.43 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=33.1
Q ss_pred ccCCCEEEEEecCCcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEE
Q 014302 245 SPTGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAF 296 (427)
Q Consensus 245 sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~ 296 (427)
...+..++.++.|+.|+.||.++++..-.. ........+.+..+|+.++...
T Consensus 472 ~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 472 YTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 335677888999999999999998874322 2111122344567787655443
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.12 E-value=9.9 Score=33.89 Aligned_cols=118 Identities=14% Similarity=0.092 Sum_probs=75.1
Q ss_pred EEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC---Ccccc
Q 014302 241 ILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP---SLDAH 317 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~---~~~~~ 317 (427)
+.-.+|..+.||.-. ...+.|+|+++.+..........|.-=.|-.+.. |+..+. ..++-|++.+... .++.|
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~-L~lVT~--taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT-VALVTD--NAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSE-EEEEES--SEEEEEESSTTCCCEEEEECC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCe-EEEEcC--CcEEEEcccCCCCCceeeecc
Confidence 344578888777554 6889999999888765555566788888876544 444332 2688888865311 11111
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC-cceeEEEEEEeccCce
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD-IYKGLIAIYDARRTPL 372 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d-~~~g~i~vwd~~~~~~ 372 (427)
.. + ....|-....+++.+|++.+.-...+ +-.|.+.+|..+.+..
T Consensus 147 ~~---------L-~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s 192 (365)
T 2xzh_A 147 SS---------L-AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS 192 (365)
T ss_dssp GG---------G-TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE
T ss_pred hh---------c-ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc
Confidence 11 1 12367888889999999885322122 2258899999876543
No 318
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.05 E-value=2.4 Score=41.36 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=31.8
Q ss_pred CCCEEEEEecCCcEEEEEcCCCCccccccCCCCe--eEEEECCCCCEEEE
Q 014302 247 TGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFV--TGATWDPEGRMILL 294 (427)
Q Consensus 247 ~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v--~~v~~spdg~~l~~ 294 (427)
.+..++.++.|+.++.||.++++..-.......+ .-+.|..+|+..+.
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence 4667888999999999999999874322112222 23666678874443
No 319
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.93 E-value=12 Score=34.72 Aligned_cols=209 Identities=11% Similarity=0.176 Sum_probs=115.9
Q ss_pred eeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCCCceEEEecCCeEEEEeccCCCCcccccc
Q 014302 104 GVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSYPGNAASVRS 183 (427)
Q Consensus 104 ~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~~la~g~~~~i~iw~~~~~~~~~~~~~ 183 (427)
+.-.||..+.||.=. ..+++|+|++.. .....+.....|.--.|-.+ ..|+.-.+..|.-|++.-+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K---~klks~~~~e~VvfWkWis~--~~l~lVT~taVyHWsi~~~s------- 136 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMK---SKMKAHTMTDDVTFWKWISL--NTVALVTDNAVYHWSMEGES------- 136 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTT---EEEEEEECSSCCCEEEEEET--TEEEEECSSEEEEEESSSSC-------
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHh---hhhcceecCCCceEEEecCC--CeEEEEcCCeeEEecccCCC-------
Confidence 445689888888765 789999999987 33333334557777788755 47777778889999986100
Q ss_pred CcccccccccCCCCcceeEeehhcccCCCceeeeEeCCCCCCcccCceEEeccCCeEEEEEccCCCEEE-EEe------c
Q 014302 184 GAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFPGLGTPIRRGFGGLSILKWSPTGDYFF-AAK------F 256 (427)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~-~~~------~ 256 (427)
.+...++.|.. + ....|.....+++.++++ +|= -
T Consensus 137 -----------------~P~kvFdR~~~--------------------L--~~~QIInY~~d~~~kW~~l~GI~~~~~~v 177 (494)
T 1bpo_A 137 -----------------QPVKMFDRHSS--------------------L--AGCQIINYRTDAKQKWLLLTGISAQQNRV 177 (494)
T ss_dssp -----------------CCEEEEECCGG--------------------G--TTCEEEEEEECTTSSEEEEEEEEEETTEE
T ss_pred -----------------Cchhheecchh--------------------c--ccceEEEEEECCCCCeEEEEeecccCCcc
Confidence 11111221100 0 012234444556666555 221 2
Q ss_pred CCcEEEEEcCCCCccccccCCCCeeEEEECCC---CCEEEEEEcC--CceeeeeeeCCCC---CCcccccccccccccee
Q 014302 257 DGTFYLWETNTWTSEPWSSTSGFVTGATWDPE---GRMILLAFAG--SLTLGSIHFASKP---PSLDAHLLPVDLPDIVS 328 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spd---g~~l~~~~~~--~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~ 328 (427)
.|.+.+|..+........+|...-..+...-+ ...+.++... ++.+.++.+.... +.+......+.++.
T Consensus 178 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fpp--- 254 (494)
T 1bpo_A 178 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP--- 254 (494)
T ss_dssp EEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCT---
T ss_pred cceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCc---
Confidence 36789999887776666666554443333211 1233334332 2577888875431 11211111111110
Q ss_pred eccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 329 LTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 329 ~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
....+-.-+|..|+.-..+.+.... |.|++||++++.++
T Consensus 255 e~~~DFPvamqvs~kygviyviTK~------G~i~lyDleTgt~i 293 (494)
T 1bpo_A 255 EAQNDFPVAMQISEKHDVVFLITKY------GYIHLYDLETGTCI 293 (494)
T ss_dssp TSTTCCEEEEEEETTTTEEEEEETT------SEEEEEETTTCCEE
T ss_pred ccccCceeEEEecccCCEEEEEecC------ceEEEEecccceee
Confidence 0011234577788777766664333 66999999999987
No 320
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.79 E-value=10 Score=35.70 Aligned_cols=52 Identities=15% Similarity=0.113 Sum_probs=34.9
Q ss_pred CCeEEEEEccCCC-EEEEEecCCcEEEEEcCCCC-ccc-------ccc-----CCCCeeEEEECCC
Q 014302 237 GGLSILKWSPTGD-YFFAAKFDGTFYLWETNTWT-SEP-------WSS-----TSGFVTGATWDPE 288 (427)
Q Consensus 237 ~~v~~~~~sp~g~-~l~~~~~dg~v~iwd~~~~~-~~~-------~~~-----~~~~v~~v~~spd 288 (427)
..-+.|+|.|+|. .|+++...|.|++++..... ... +.. .......++|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4567899999996 56666778999999754321 111 111 1456789999996
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.29 E-value=17 Score=33.78 Aligned_cols=118 Identities=14% Similarity=0.093 Sum_probs=73.8
Q ss_pred EEEEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC---Ccccc
Q 014302 241 ILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP---SLDAH 317 (427)
Q Consensus 241 ~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~---~~~~~ 317 (427)
+.-.+|..+.||.-. ...+.|+|+++............|.--.|-.+. .|+..+ +..++-|.+.+... .++.|
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~-~l~lVT--~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT--DNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETT-EEEEEC--SSEEEEEESSSSCCCEEEEECC
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCC-eEEEEc--CCeeEEecccCCCCchhheecc
Confidence 444677777777544 788999999988775554445567777776544 444432 23788888865311 11222
Q ss_pred ccccccccceeeccCCceeEEEECCCCCEEEEEEecCCC-cceeEEEEEEeccCce
Q 014302 318 LLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDD-IYKGLIAIYDARRTPL 372 (427)
Q Consensus 318 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d-~~~g~i~vwd~~~~~~ 372 (427)
.. + .+..|-....+++.+|++.+.-...+ +-.|.+.+|..+.+..
T Consensus 146 ~~---------L-~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s 191 (494)
T 1bpo_A 146 SS---------L-AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS 191 (494)
T ss_dssp GG---------G-TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE
T ss_pred hh---------c-ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc
Confidence 11 1 12367888889999999875322112 2248899999876543
No 322
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.24 E-value=5.4 Score=38.26 Aligned_cols=130 Identities=13% Similarity=0.033 Sum_probs=78.2
Q ss_pred CeEEEEEccCCCEEEE-EecCCcEEEEEcCCCCc---------c----ccccCCCCeeEEEECCCCCEEEEEEcCCceee
Q 014302 238 GLSILKWSPTGDYFFA-AKFDGTFYLWETNTWTS---------E----PWSSTSGFVTGATWDPEGRMILLAFAGSLTLG 303 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~-~~~dg~v~iwd~~~~~~---------~----~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~ 303 (427)
....+..+|||+++++ +--+.++.++|++.... . ......-.....+|.++| ..+++.--++.+.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceEE
Confidence 3455778999999995 55688999999875211 0 011344566788999999 5666666677888
Q ss_pred eeeeCCCCCCccccc-cccccccceeeccCCceeEEEE------CCCCCEEEEEEecCCCcc-------eeEEEEEEecc
Q 014302 304 SIHFASKPPSLDAHL-LPVDLPDIVSLTGSQGIEKIAW------DASGERLAVSYKGGDDIY-------KGLIAIYDARR 369 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~v~~------sp~g~~La~~~~~~~d~~-------~g~i~vwd~~~ 369 (427)
.|++......+.+.. .++ ...+..+-.+-.+.- .|||+||++...-+-|++ +-.-.|+|+..
T Consensus 403 kWni~~a~~~~~g~~~~~v----~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYI----KQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCE----EEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred EEeccHHHHHhcCccCCee----eeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 888765311111111 001 111222222333322 589999999877777764 33457888865
Q ss_pred Cce
Q 014302 370 TPL 372 (427)
Q Consensus 370 ~~~ 372 (427)
.+.
T Consensus 479 dkM 481 (638)
T 3sbq_A 479 DEM 481 (638)
T ss_dssp SSC
T ss_pred Cce
Confidence 443
No 323
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=85.14 E-value=29 Score=33.78 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=19.4
Q ss_pred eeEEcCCCCE----EEEEeCCCeEEEEEccCC
Q 014302 104 GVSWHQHKHI----VAFISGSTQVIVRDYEDS 131 (427)
Q Consensus 104 ~l~~sp~g~~----lat~~~d~~v~vwd~~~~ 131 (427)
.++++|.+.. |++++.|+.+..+|..++
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 3455444444 788888999888887766
No 324
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=81.74 E-value=15 Score=35.93 Aligned_cols=47 Identities=17% Similarity=0.173 Sum_probs=30.8
Q ss_pred CCCEEEEEecCCcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEE
Q 014302 247 TGDYFFAAKFDGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMIL 293 (427)
Q Consensus 247 ~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~ 293 (427)
.+..++.++.|+.++.||.++++..-.. .......-+.|..+|+..+
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv 531 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYV 531 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEE
Confidence 5677888999999999999998863221 2222223355666776443
No 325
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=75.98 E-value=52 Score=30.81 Aligned_cols=53 Identities=17% Similarity=0.208 Sum_probs=33.9
Q ss_pred eeeeEEcCCCC-EEEEEeCCCeEEEEEccCCC-Cccee-e----cc----CCcCCeeEEEEccC
Q 014302 102 LQGVSWHQHKH-IVAFISGSTQVIVRDYEDSG-KDACI-L----TS----DSQRDVKVLEWRPN 154 (427)
Q Consensus 102 V~~l~~sp~g~-~lat~~~d~~v~vwd~~~~~-~~~~~-~----~~----~~~~~v~~l~~sp~ 154 (427)
-..|+|.|+|. +|+++...|.|++++.+... ..... + .. ........|+|+|+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 46899999996 66667789999887643221 11111 1 11 11457889999996
No 326
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=75.66 E-value=60 Score=31.40 Aligned_cols=53 Identities=8% Similarity=-0.021 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCC
Q 014302 257 DGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASK 310 (427)
Q Consensus 257 dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~ 310 (427)
+|.|..||+.+++..-.......+..-.....+..++++ ..++.++.++..+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-~~dg~l~A~D~~tG 517 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG-TGDGYFKAFDAKSG 517 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE-CTTSEEEEEETTTC
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE-CCCCcEEEEECCCC
Confidence 578999999888753211111122111111235556555 45557777776654
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=74.17 E-value=4.3 Score=38.97 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=58.7
Q ss_pred cEEEEEcCC----CCc-cccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccc-cccccccceeeccC
Q 014302 259 TFYLWETNT----WTS-EPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHL-LPVDLPDIVSLTGS 332 (427)
Q Consensus 259 ~v~iwd~~~----~~~-~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 332 (427)
.|.+.|.+. ... ..+.........+..+|||+++++++.-+.++.++++......+.... .+.+. .......+
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~-~~ae~e~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDV-IVGEPELG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGG-EEECCBCC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccc-eEeeccCC
Confidence 366666655 222 122233444567889999999999888777888887764211111110 00000 01112233
Q ss_pred CceeEEEECCCCCEEEEEEecCCCcceeEEEEEEecc
Q 014302 333 QGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARR 369 (427)
Q Consensus 333 ~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~ 369 (427)
-.....+|+++|.-..+.|-+ ..|.-|++..
T Consensus 378 lGPlHt~Fd~~G~aYTtlfid------SqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFID------SQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTT------TEEEEEEHHH
T ss_pred CcccEEEECCCCceEeeeeec------ceEEEEeccH
Confidence 467888999999444343333 3499999965
No 328
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=73.10 E-value=44 Score=28.65 Aligned_cols=23 Identities=22% Similarity=0.226 Sum_probs=15.3
Q ss_pred CCCEEEEEeCC-----CeEEEEEccCCC
Q 014302 110 HKHIVAFISGS-----TQVIVRDYEDSG 132 (427)
Q Consensus 110 ~g~~lat~~~d-----~~v~vwd~~~~~ 132 (427)
++.+++.|+.+ ..+.+||..+..
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 56677777654 457788877664
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=61.98 E-value=89 Score=34.03 Aligned_cols=115 Identities=14% Similarity=0.110 Sum_probs=70.3
Q ss_pred EEccCCCEEEEEecCCcEEEEEcCCCCccccccCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCC---Ccccccc
Q 014302 243 KWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPP---SLDAHLL 319 (427)
Q Consensus 243 ~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~---~~~~~~~ 319 (427)
-.+|..+.||.-. ..++.|+|+.+............|.--.|-.+.. |+..+ +..++-|++.+... .++.|..
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~-l~lVT--~~aVyHW~~~~~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT-VALVT--DNAVYHWSMEGESQPVKMFDRHSS 147 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCe-eEEEc--CCeEEEeccCCCCccHHHHhcchh
Confidence 3567777666443 6889999998887755554556677777876544 33332 22678888865211 1111211
Q ss_pred ccccccceeeccCCceeEEEECCCCCEEEEEEecCCCc-ceeEEEEEEeccCc
Q 014302 320 PVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDI-YKGLIAIYDARRTP 371 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~-~~g~i~vwd~~~~~ 371 (427)
+. +..|-.-.-+++.+|++.+.-...++ -.|.+.+|.++.+.
T Consensus 148 ---------L~-~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~ 190 (1630)
T 1xi4_A 148 ---------LA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 190 (1630)
T ss_pred ---------cc-cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc
Confidence 11 23677888899999998753222221 24789999886543
No 330
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=61.57 E-value=17 Score=35.23 Aligned_cols=59 Identities=14% Similarity=0.229 Sum_probs=39.6
Q ss_pred CeEEEEEccCCCEEEEEecC------------CcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEE
Q 014302 238 GLSILKWSPTGDYFFAAKFD------------GTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAF 296 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~d------------g~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~ 296 (427)
..-.|+|+|.|++++.-..+ ..+.+.+..+++...+. .....++.++|+||++.|++..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 34668899999855533221 13455565566654443 4567899999999999988754
No 331
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=57.54 E-value=2e+02 Score=30.59 Aligned_cols=134 Identities=14% Similarity=0.171 Sum_probs=70.5
Q ss_pred CcEEEEEcCCCCc-cccc-cCCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCCCCccccccccccccceeeccCCce
Q 014302 258 GTFYLWETNTWTS-EPWS-STSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKPPSLDAHLLPVDLPDIVSLTGSQGI 335 (427)
Q Consensus 258 g~v~iwd~~~~~~-~~~~-~~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 335 (427)
..|++.+...... ..|. .....|...+.+. ..++.+. + +.+..+.+.+. .+ ...........|
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g-~~l~~fel~~~--~L---------~~~~~~~l~~ev 556 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-G-RALYYLQIHPQ--EL---------RQISHTEMEHEV 556 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-T-TEEEEEEEETT--EE---------EEEEEEECSSCE
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-C-CEEEEEEeeCC--ce---------eeecccCCCCce
Confidence 3466666543322 2333 2334566665543 4555553 3 35555555432 01 011112234478
Q ss_pred eEEEECCC------CCEEEEEEecCC-CcceeEEEEEEeccCceEEEeeeeeeeCCCCCCCceeEEeccCCCCCceeEEE
Q 014302 336 EKIAWDAS------GERLAVSYKGGD-DIYKGLIAIYDARRTPLISLSLIGFIRGPGDNPKPVAFSFHDKFKQGPLLSVC 408 (427)
Q Consensus 336 ~~v~~sp~------g~~La~~~~~~~-d~~~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~g~~l~v~ 408 (427)
.++++.|. ++++|+ |.. | ++|+|+++...+.+.....+ ....|-++.+.. +.....|-+|
T Consensus 557 scl~i~~~~~~~~~s~~~aV---g~~~d---~tv~I~sL~~l~~~~~~~L~------~~~~p~si~l~~-~~~~~~L~ig 623 (1158)
T 3ei3_A 557 ACLDITPLGDSNGLSPLCAI---GLWTD---ISARILKLPSFELLHKEMLG------GEIIPRSILMTT-FESSHYLLCA 623 (1158)
T ss_dssp EEEECCCCSSSTTCCSEEEE---EETTT---TEEEEEETTTCCEEEEEECC------SSCCEEEEEEEE-ETTEEEEEEE
T ss_pred EEEEeecCCCCcccccEEEE---EECCC---CEEEEEECCCCCeEEEEECC------CCCCCcEEEEEE-eCCCcEEEEE
Confidence 99999853 478988 443 5 67999999876555333221 111122332221 1223457899
Q ss_pred eeCceEEEEec
Q 014302 409 WSSGFCCTYPL 419 (427)
Q Consensus 409 ~~~g~i~~~~~ 419 (427)
..+|.+..|.+
T Consensus 624 l~dG~l~~~~~ 634 (1158)
T 3ei3_A 624 LGDGALFYFGL 634 (1158)
T ss_dssp ETTSEEEEEEE
T ss_pred eCCCeEEEEEE
Confidence 99999877765
No 332
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=49.61 E-value=53 Score=34.07 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=27.9
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDS 131 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~ 131 (427)
.+.+++..++..+|.+-+.|+++|||++.++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 6778888888899999999999999999887
No 333
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=48.94 E-value=1.3e+02 Score=31.17 Aligned_cols=33 Identities=9% Similarity=0.060 Sum_probs=28.4
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCc
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 270 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~ 270 (427)
.+.+++..++..++++-+.|+++|+|++.++++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 456677788888999999999999999998876
No 334
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=48.33 E-value=55 Score=31.58 Aligned_cols=63 Identities=11% Similarity=0.197 Sum_probs=41.9
Q ss_pred CCeEEEEEccCCCEEEEEec------------CCcEEEEEcCCCCccccc--cCCCCeeEEEECCCCCEEEEEEcCC
Q 014302 237 GGLSILKWSPTGDYFFAAKF------------DGTFYLWETNTWTSEPWS--STSGFVTGATWDPEGRMILLAFAGS 299 (427)
Q Consensus 237 ~~v~~~~~sp~g~~l~~~~~------------dg~v~iwd~~~~~~~~~~--~~~~~v~~v~~spdg~~l~~~~~~~ 299 (427)
.....|.|+++|.+.+.... ...|..++..+++...+. .....++.++|+||++.|+++...-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence 45667889999986663221 114666666666655444 2345789999999999998865433
No 335
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=48.18 E-value=2.8e+02 Score=29.49 Aligned_cols=69 Identities=13% Similarity=0.119 Sum_probs=42.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCCCCcceeeccCCcCCeeEEEEccCC-----CceEEEec--CCeEEEEecc
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDSGKDACILTSDSQRDVKVLEWRPNG-----GRSLSVGC--KGGICIWAPS 173 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~-----~~~la~g~--~~~i~iw~~~ 173 (427)
.|...+.+ +.+++.++ ++.+.++.++.+.. ...........|.|+++.|.. ..++++|. +++++|++++
T Consensus 515 ~I~~As~n--~~~vvva~-g~~l~~fel~~~~L-~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 515 NISVASCN--SSQVVVAV-GRALYYLQIHPQEL-RQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCEEEEC--SSEEEEEE-TTEEEEEEEETTEE-EEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEeC--CCEEEEEE-CCEEEEEEeeCCce-eeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 34444444 23555554 56777777765411 111122345679999998643 25888886 5899999986
No 336
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=45.52 E-value=1.4e+02 Score=25.38 Aligned_cols=22 Identities=9% Similarity=-0.109 Sum_probs=14.9
Q ss_pred CCCEEEEEeCC------CeEEEEEccCC
Q 014302 110 HKHIVAFISGS------TQVIVRDYEDS 131 (427)
Q Consensus 110 ~g~~lat~~~d------~~v~vwd~~~~ 131 (427)
++.+++.|+.+ ..+.+||....
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 56677777654 45777887766
No 337
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=43.04 E-value=1.5e+02 Score=25.05 Aligned_cols=23 Identities=13% Similarity=0.267 Sum_probs=15.3
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCC
Q 014302 247 TGDYFFAAKFD-----GTFYLWETNTWT 269 (427)
Q Consensus 247 ~g~~l~~~~~d-----g~v~iwd~~~~~ 269 (427)
+++.++.|+.+ ..+.+||+.+.+
T Consensus 206 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 206 NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 45555566654 468999987654
No 338
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=40.93 E-value=1.7e+02 Score=24.97 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=15.4
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCC
Q 014302 247 TGDYFFAAKFD-----GTFYLWETNTWT 269 (427)
Q Consensus 247 ~g~~l~~~~~d-----g~v~iwd~~~~~ 269 (427)
+++.++.|+.+ ..+.+||+.+.+
T Consensus 215 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 215 HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 55555566654 458999987654
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=40.02 E-value=1.8e+02 Score=28.80 Aligned_cols=65 Identities=8% Similarity=0.057 Sum_probs=34.0
Q ss_pred CCCCEEEEEeCCC--eEEEEEccCCCCcceee---ccCCcCCeeEEEEccCCCceEEEecC--------CeEEEEecc
Q 014302 109 QHKHIVAFISGST--QVIVRDYEDSGKDACIL---TSDSQRDVKVLEWRPNGGRSLSVGCK--------GGICIWAPS 173 (427)
Q Consensus 109 p~g~~lat~~~d~--~v~vwd~~~~~~~~~~~---~~~~~~~v~~l~~sp~~~~~la~g~~--------~~i~iw~~~ 173 (427)
.++..++.|+.++ .+.+||..+..+..... .........++.+..+...+++.|+. +.+.+||+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 3777778876654 67888877763322221 11111222335555552366666642 235566665
No 340
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=38.32 E-value=1.8e+02 Score=24.58 Aligned_cols=23 Identities=9% Similarity=0.151 Sum_probs=15.3
Q ss_pred CCCEEEEEecC-----CcEEEEEcCCCC
Q 014302 247 TGDYFFAAKFD-----GTFYLWETNTWT 269 (427)
Q Consensus 247 ~g~~l~~~~~d-----g~v~iwd~~~~~ 269 (427)
+++.++.|+.+ ..+.+||+.+.+
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 45555666654 368899987654
No 341
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=35.50 E-value=2.1e+02 Score=24.44 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=15.3
Q ss_pred CCCEEEEEecCC-----cEEEEEcCCCC
Q 014302 247 TGDYFFAAKFDG-----TFYLWETNTWT 269 (427)
Q Consensus 247 ~g~~l~~~~~dg-----~v~iwd~~~~~ 269 (427)
+++.++.|+.++ .+.+||+.+.+
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 556666776554 48888887654
No 342
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=34.35 E-value=88 Score=30.35 Aligned_cols=60 Identities=7% Similarity=0.110 Sum_probs=34.1
Q ss_pred ceeeeEEcCCCCEEEEEeCC----------CeEEEEEccCCCCcceeeccC-CcCCeeEEEEccCCCceEE
Q 014302 101 DLQGVSWHQHKHIVAFISGS----------TQVIVRDYEDSGKDACILTSD-SQRDVKVLEWRPNGGRSLS 160 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d----------~~v~vwd~~~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~la 160 (427)
..--|+|+|.|.+++.-..+ +.-.+|-......+...+... ....++.+.|+||++.+++
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 34678999999855443211 122344444332233333333 4567999999999854444
No 343
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=33.22 E-value=2e+02 Score=24.40 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=14.4
Q ss_pred CCCEEEEEecCC-----cEEEEEcCCCC
Q 014302 247 TGDYFFAAKFDG-----TFYLWETNTWT 269 (427)
Q Consensus 247 ~g~~l~~~~~dg-----~v~iwd~~~~~ 269 (427)
+++.++.|+.++ .+.+||+.+.+
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 555666666543 47888876543
No 344
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=32.80 E-value=2.3e+02 Score=24.10 Aligned_cols=16 Identities=13% Similarity=0.250 Sum_probs=12.0
Q ss_pred eEEEEEEeccCceEEE
Q 014302 360 GLIAIYDARRTPLISL 375 (427)
Q Consensus 360 g~i~vwd~~~~~~~~~ 375 (427)
..|.+||+.+.....+
T Consensus 278 ~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 278 DSVECYDPDTDTWSEV 293 (308)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCCEEeec
Confidence 4588999988776544
No 345
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=31.88 E-value=3.9e+02 Score=26.43 Aligned_cols=112 Identities=14% Similarity=0.215 Sum_probs=59.9
Q ss_pred CeEEEEEccCCCEEEEEecCCcEEEEEcCCCCccccc--c----CCCCeeEEEECCCCCEEEEEEcCCceeeeeeeCCCC
Q 014302 238 GLSILKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWS--S----TSGFVTGATWDPEGRMILLAFAGSLTLGSIHFASKP 311 (427)
Q Consensus 238 ~v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~~~~~--~----~~~~v~~v~~spdg~~l~~~~~~~~~i~~~~~~~~~ 311 (427)
.|.++....+|...+ ++. +.+..||..+.+...+. . ....|.++...+++..|.+++. . -+..++....
T Consensus 147 ~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~-Gl~~~~~~~~- 221 (758)
T 3ott_A 147 TIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-G-YLFQYFPSTG- 221 (758)
T ss_dssp CEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-E-EEEEEETTTT-
T ss_pred eEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-C-CCeEEcCCCC-
Confidence 466677776776544 443 45777776655432211 1 1234778877777765544543 2 2344433221
Q ss_pred CCccccccccccccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEeccCceE
Q 014302 312 PSLDAHLLPVDLPDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDARRTPLI 373 (427)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~~~~~~ 373 (427)
.+.. . ..+ ....|.++..+.+|.+.+.+ .. | |.+++..+....
T Consensus 222 -~~~~----~-----~~l-~~~~i~~i~~d~~g~lWigT--~~-----G-l~~~~~~~~~~~ 264 (758)
T 3ott_A 222 -QIKQ----T-----EAF-HNNSIKSLALDGNGDLLAGT--DN-----G-LYVYHNDTTPLQ 264 (758)
T ss_dssp -EEEE----E-----EEE-EEEEEEEEEECTTCCEEEEE--TT-----E-EEEECCTTSCCE
T ss_pred -eEEe----c-----cCC-CCCeEEEEEEcCCCCEEEEe--CC-----c-eeEEecCCCcEE
Confidence 1100 0 001 12258889889888877653 21 2 778887766543
No 346
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=29.49 E-value=4.3e+02 Score=26.19 Aligned_cols=100 Identities=8% Similarity=0.059 Sum_probs=51.6
Q ss_pred cCCcEEEEEcCCCC------c--cccc--cCCCCeeEEEECCCCCEEEEEEcCC-ceeeeeeeCCCCCCccccccc-ccc
Q 014302 256 FDGTFYLWETNTWT------S--EPWS--STSGFVTGATWDPEGRMILLAFAGS-LTLGSIHFASKPPSLDAHLLP-VDL 323 (427)
Q Consensus 256 ~dg~v~iwd~~~~~------~--~~~~--~~~~~v~~v~~spdg~~l~~~~~~~-~~i~~~~~~~~~~~~~~~~~~-~~~ 323 (427)
..+.|.+.|+.... . ..+. .....+..+.|..+ ..+++...+. ..+.++++.+.. + .... +.
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~--~--~~~~~i~- 391 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ--W--TKPVVLK- 391 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE--E--CCCEEEC-
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc--e--EEEeccC-
Confidence 46678888987642 1 1112 33456778999875 3444333332 234555443221 0 0000 11
Q ss_pred ccceeeccCCceeEEEECCCCCEEEEEEecCCCcceeEEEEEEec
Q 014302 324 PDIVSLTGSQGIEKIAWDASGERLAVSYKGGDDIYKGLIAIYDAR 368 (427)
Q Consensus 324 ~~~~~~~~~~~i~~v~~sp~g~~La~~~~~~~d~~~g~i~vwd~~ 368 (427)
+...+.+..+.+++++..++..+.+ ...++.+..+|+.
T Consensus 392 -----lp~~~~~~~~~~~~~~~~~~~~~ss--~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 392 -----LPYQNAIFGMSSYEEEEEALITIEN--SIVPPTIYLWVKT 429 (711)
T ss_dssp -----CCSTTCEEEEECCTTCSCEEEEEEC--SSSCCEEEEECTT
T ss_pred -----CCCCeEEEEEeecCcCCEEEEEEec--CCCCCEEEEEeCC
Confidence 1112356666777887766665333 2344778888876
No 347
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=29.09 E-value=2.6e+02 Score=23.60 Aligned_cols=17 Identities=24% Similarity=0.348 Sum_probs=13.0
Q ss_pred eEEEEEEeccCceEEEe
Q 014302 360 GLIAIYDARRTPLISLS 376 (427)
Q Consensus 360 g~i~vwd~~~~~~~~~~ 376 (427)
..+.+||+.+.....+.
T Consensus 263 ~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 263 GHILEYNTETDKWVANS 279 (306)
T ss_dssp CEEEEEETTTTEEEEEE
T ss_pred eeEEEEcCCCCeEEeCC
Confidence 56899999988776554
No 348
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.28 E-value=1.9e+02 Score=27.89 Aligned_cols=61 Identities=7% Similarity=0.090 Sum_probs=34.8
Q ss_pred ceeeeEEcCCCCEEEEEeCC----------CeEEEEEccCCCCcceeeccC-CcCCeeEEEEccCCCceEEE
Q 014302 101 DLQGVSWHQHKHIVAFISGS----------TQVIVRDYEDSGKDACILTSD-SQRDVKVLEWRPNGGRSLSV 161 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d----------~~v~vwd~~~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~la~ 161 (427)
....|.|.++|.+.+.-... +.-.||-+.....+...+... ....++.++|+||++.+++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 56789999999865532111 111344444432233333333 34568999999999555444
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=24.60 E-value=39 Score=35.86 Aligned_cols=32 Identities=9% Similarity=0.073 Sum_probs=26.9
Q ss_pred eEEEEEccCCCEEEEEecCCcEEEEEcCCCCc
Q 014302 239 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 270 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~ 270 (427)
+.+++..++..++++-+.|+++|||++.++++
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 34555667888999999999999999999876
No 350
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=23.67 E-value=3.6e+02 Score=23.36 Aligned_cols=151 Identities=6% Similarity=-0.076 Sum_probs=0.0
Q ss_pred CCCEEEEEeCC---------------------------------------CeEEEEEccCCCCcceeeccCCcCCeeEEE
Q 014302 110 HKHIVAFISGS---------------------------------------TQVIVRDYEDSGKDACILTSDSQRDVKVLE 150 (427)
Q Consensus 110 ~g~~lat~~~d---------------------------------------~~v~vwd~~~~~~~~~~~~~~~~~~v~~l~ 150 (427)
++++++.|+.+ ..+.+||..+..+............-.+++
T Consensus 118 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~ 197 (357)
T 2uvk_A 118 NGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVV 197 (357)
T ss_dssp TTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEE
T ss_pred CCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEE
Q ss_pred EccCCCceEEEec-------CCeEEEEec--cCCCCccccccCcccccccccCCCCcceeEeehhcccCCCceeeeEeCC
Q 014302 151 WRPNGGRSLSVGC-------KGGICIWAP--SYPGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGP 221 (427)
Q Consensus 151 ~sp~~~~~la~g~-------~~~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 221 (427)
.. ++ .+++.|+ ...+.++++ . ...|..+..+...
T Consensus 198 ~~-~~-~iyv~GG~~~~~~~~~~v~~~d~d~~-----------------------~~~W~~~~~~~~~------------ 240 (357)
T 2uvk_A 198 NK-GD-KTWLINGEAKPGLRTDAVFELDFTGN-----------------------NLKWNKLAPVSSP------------ 240 (357)
T ss_dssp EE-TT-EEEEECCEEETTEECCCEEEEECC--------------------------CEEEECCCSSTT------------
T ss_pred EE-CC-EEEEEeeecCCCcccCceEEEEecCC-----------------------CCcEEecCCCCCC------------
Q ss_pred CCCCcccCceEEeccCCeEEEEEccCCCEEEEEecC----------------------CcEEEEEcCCCCccccc-cCCC
Q 014302 222 DGRFPGLGTPIRRGFGGLSILKWSPTGDYFFAAKFD----------------------GTFYLWETNTWTSEPWS-STSG 278 (427)
Q Consensus 222 dg~~l~~~~~~~~~~~~v~~~~~sp~g~~l~~~~~d----------------------g~v~iwd~~~~~~~~~~-~~~~ 278 (427)
.......+...+++.++.|+.+ ..+.+||+.+.+=.... ....
T Consensus 241 --------------~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 306 (357)
T 2uvk_A 241 --------------DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG 306 (357)
T ss_dssp --------------TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC
T ss_pred --------------cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC
Q ss_pred CeeEEEECCCCCEEEEEEcCCc-----eeeeeeeCCCC
Q 014302 279 FVTGATWDPEGRMILLAFAGSL-----TLGSIHFASKP 311 (427)
Q Consensus 279 ~v~~v~~spdg~~l~~~~~~~~-----~i~~~~~~~~~ 311 (427)
.....+..-+++.+++|+.+.. .+..+.+.+++
T Consensus 307 r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 307 RAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred cccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
No 351
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=22.85 E-value=3.5e+02 Score=22.94 Aligned_cols=51 Identities=8% Similarity=0.193 Sum_probs=25.6
Q ss_pred CCCEEEEEec-C-----CcEEEEEcCCCCccccc---cCCCCeeEEEECCCCCEEEEEEcCC
Q 014302 247 TGDYFFAAKF-D-----GTFYLWETNTWTSEPWS---STSGFVTGATWDPEGRMILLAFAGS 299 (427)
Q Consensus 247 ~g~~l~~~~~-d-----g~v~iwd~~~~~~~~~~---~~~~~v~~v~~spdg~~l~~~~~~~ 299 (427)
+++.++.|+. + ..+.+||..+.+=.... ........+.+ +++.+++++.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 207 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTD 207 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECS
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCC
Confidence 4555556665 2 45889998765421111 11111122222 567777766544
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=22.32 E-value=85 Score=31.20 Aligned_cols=30 Identities=13% Similarity=0.371 Sum_probs=24.2
Q ss_pred eEEEEEccCCCEEEEEecCCcEEEEEcCCCCc
Q 014302 239 LSILKWSPTGDYFFAAKFDGTFYLWETNTWTS 270 (427)
Q Consensus 239 v~~~~~sp~g~~l~~~~~dg~v~iwd~~~~~~ 270 (427)
|.++.+ +..+|++-+.|.++|+|+++++++
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCce
Confidence 444443 577999999999999999998875
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=21.31 E-value=1.7e+02 Score=29.15 Aligned_cols=29 Identities=7% Similarity=0.169 Sum_probs=24.0
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDS 131 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~ 131 (427)
.|.++.+ +..+|++-+.|.++|+|++.+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~ 251 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSF 251 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCC
Confidence 5666655 3679999999999999999887
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=20.96 E-value=73 Score=33.84 Aligned_cols=31 Identities=10% Similarity=0.172 Sum_probs=27.1
Q ss_pred ceeeeEEcCCCCEEEEEeCCCeEEEEEccCC
Q 014302 101 DLQGVSWHQHKHIVAFISGSTQVIVRDYEDS 131 (427)
Q Consensus 101 ~V~~l~~sp~g~~lat~~~d~~v~vwd~~~~ 131 (427)
.+.+++..++..+|.+-+.|+++|||++.++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCC
Confidence 5566777888899999999999999999887
Done!