BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014307
(427 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 474 bits (1220), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/271 (83%), Positives = 239/271 (88%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 1 GSSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEK 60
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
LQNLCGGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVL
Sbjct: 61 CIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL 120
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
YPTL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 121 YPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 180
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
GKEYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVK
Sbjct: 181 GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 240
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 241 IAKVLGTDGLNVYLNKYRIELDPQLEALVGR 271
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/269 (84%), Positives = 239/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 2 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 61
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNLCGGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 62 IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 121
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 181
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGR 270
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/269 (84%), Positives = 239/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNLCGGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 61 IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGR 269
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 473 bits (1217), Expect = e-134, Method: Compositional matrix adjust.
Identities = 228/276 (82%), Positives = 241/276 (87%)
Query: 97 VRRSGAPSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHC 156
V R SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++
Sbjct: 15 VPRGSHMSKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINV 74
Query: 157 TDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNT 216
+NE LQNL GGPNIVKLLDIVRDQ SKTPSLIFE+VNNT
Sbjct: 75 NNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNT 134
Query: 217 DFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA 276
DFKVLYPTL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLA
Sbjct: 135 DFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 194
Query: 277 EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNY 336
EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+
Sbjct: 195 EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNH 254
Query: 337 DQLVKIAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
DQLVKIAKVLGTD LNAYLNKY IELDP L ALVGR
Sbjct: 255 DQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGR 290
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/269 (84%), Positives = 239/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNLCGGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 61 IKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGR 269
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 470 bits (1210), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/269 (83%), Positives = 238/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNL GGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 61 IKILKPVKKKKIKREIKILQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGR 269
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 470 bits (1210), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/269 (83%), Positives = 238/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 2 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 61
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNL GGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 62 IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 121
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 181
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGR 270
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/269 (83%), Positives = 238/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNL GGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 61 IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGR 269
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/269 (83%), Positives = 238/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNL GGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 61 IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGR 269
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/269 (83%), Positives = 238/269 (88%)
Query: 104 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXX 163
SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++ +NE
Sbjct: 1 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCI 60
Query: 164 XXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP 223
LQNL GGPNIVKLLDIVRDQ SKTPSLIFE+VNNTDFKVLYP
Sbjct: 61 IKILKPVKKKKIKREIKILQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYP 120
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
TL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHPGK
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
EYNVRVASRYFKGPELLVDLQDYDYSLD+WSLGCMFAGMIFRKEPFFYGHDN+DQLVKIA
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 344 KVLGTDELNAYLNKYHIELDPHLAALVGR 372
KVLGTD LN YLNKY IELDP L ALVGR
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGR 269
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 413 bits (1062), Expect = e-116, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 4 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 63
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 64 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 123
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 274
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/271 (70%), Positives = 222/271 (81%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDY S V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 10 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 69
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 70 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 129
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 189
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 190 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 249
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 250 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 280
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 3 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 62
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 63 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 122
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 182
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 242
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 273
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 412 bits (1058), Expect = e-115, Method: Compositional matrix adjust.
Identities = 191/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 4 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 63
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 64 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 123
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 274
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/271 (70%), Positives = 223/271 (82%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VAVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
Y TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNV+IDHE RKLRLIDWGLAEFYHP
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 190/271 (70%), Positives = 222/271 (81%)
Query: 102 APSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEX 161
PS+ARVY+D+N RPREYWDYES V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 VPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK 64
Query: 162 XXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL 221
L+NL GGPNI+ L DIV+D S+TP+L+FEHVNNTDFK L
Sbjct: 65 VVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL 124
Query: 222 YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP 281
TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMIDHE RKLRLIDWGLAEFYHP
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 184
Query: 282 GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
G+EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFRKEPFF+GHDNYDQLV+
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
Query: 342 IAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
IAKVLGT++L Y++KY+IELDP ++GR
Sbjct: 245 IAKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 182/272 (66%), Positives = 220/272 (80%)
Query: 101 GAPSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNE 160
A S+ARVY+++N +R REYWDYE+ WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 5 AAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 64
Query: 161 XXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKV 220
L+NL GG NI+KL+D V+D SKTP+L+FE++NNTDFK
Sbjct: 65 RVVVKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQ 124
Query: 221 LYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH 280
LY L+D+D+R+Y+YELLKALDYCHS+GIMHRDVKPHNVMIDH+Q+KLRLIDWGLAEFYH
Sbjct: 125 LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 184
Query: 281 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
P +EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFR+EPFF+G DNYDQLV
Sbjct: 185 PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 244
Query: 341 KIAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
+IAKVLGT+EL YL KYHI+LDPH ++G+
Sbjct: 245 RIAKVLGTEELYGYLKKYHIDLDPHFNDILGQ 276
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 182/272 (66%), Positives = 220/272 (80%)
Query: 101 GAPSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNE 160
A S+ARVY+++N +R REYWDYE+ WG QDDY++VRK+GRGKYSEVFE ++ T+NE
Sbjct: 10 AAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNE 69
Query: 161 XXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKV 220
L+NL GG NI+KL+D V+D SKTP+L+FE++NNTDFK
Sbjct: 70 RVVVKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQ 129
Query: 221 LYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH 280
LY L+D+D+R+Y+YELLKALDYCHS+GIMHRDVKPHNVMIDH+Q+KLRLIDWGLAEFYH
Sbjct: 130 LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 189
Query: 281 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
P +EYNVRVASRYFKGPELLVD Q YDYSLD+WSLGCM A MIFR+EPFF+G DNYDQLV
Sbjct: 190 PAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 249
Query: 341 KIAKVLGTDELNAYLNKYHIELDPHLAALVGR 372
+IAKVLGT+EL YL KYHI+LDPH ++G+
Sbjct: 250 RIAKVLGTEELYGYLKKYHIDLDPHFNDILGQ 281
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FEHV+ K + L+ ++ Y+++LL+ L
Sbjct: 63 NHPNIVKLLDVIHTENKL--YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 102/175 (58%), Gaps = 12/175 (6%)
Query: 197 IVRDQQSKTPSLIFEHVNNTDFKVLYP------TLSDYDVRYYIYELLKALDYCHSQGIM 250
IV Q+K ++I E+V +T KVL ++ + YIY+L +A+ + HS GI
Sbjct: 104 IVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGIC 163
Query: 251 HRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 310
HRD+KP N++++ + L+L D+G A+ P + + SR+++ PEL++ +Y S+
Sbjct: 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSI 223
Query: 311 DLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYHIELDPH 365
DLWS+GC+F +I K P F G + DQLV+I +++GT + I ++PH
Sbjct: 224 DLWSIGCVFGELILGK-PLFSGETSIDQLVRIIQIMGTPT-----KEQMIRMNPH 272
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 8/164 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL---YPTLSDYDVRYYIYELLKALDYCH 245
PNIV L+D++ ++ T L+FE + KVL L D ++ Y+Y+LL+ + +CH
Sbjct: 79 PNIVSLIDVIHSERCLT--LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P++L+ +
Sbjct: 137 QHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y S+D+WS+GC+FA MI K P F G + DQL KI +LGT
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQLPKIFSILGT 238
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 8/164 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL---YPTLSDYDVRYYIYELLKALDYCH 245
PNIV L+D++ ++ T L+FE + KVL L D ++ Y+Y+LL+ + +CH
Sbjct: 79 PNIVSLIDVIHSERCLT--LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
I+HRD+KP N++I+ + L+L D+GLA F P + Y V + +++ P++L+ +
Sbjct: 137 QHRILHRDLKPQNLLINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y S+D+WS+GC+FA MI K P F G + DQL KI +LGT
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQLPKIFSILGT 238
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 15/227 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKALDYC 244
NIVKLLD++ + L+FEHV+ D K + + + Y+++LL+ L +C
Sbjct: 62 NIVKLLDVIHTENKL--YLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 303
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKV------LYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ E+V T ++ L T+ ++ Y+Y+LL++L Y HS GI HRD+KP N++
Sbjct: 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL 173
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D L+LID+G A+ G+ + SRY++ PEL+ +Y ++D+WS GC+ A
Sbjct: 174 LDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMA 233
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ + +P F G DQLV+I KVLGT
Sbjct: 234 ELM-QGQPLFPGESGIDQLVEIIKVLGT 260
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 15/230 (6%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKAL 241
PNIVKLLD++ + L+FE ++ D K + + + Y+++LL+ L
Sbjct: 63 NHPNIVKLLDVIHTENKL--YLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 300
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 63 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 64 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 228
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 62 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 63 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 62 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 9/227 (3%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYC 244
PNIVKLLD++ + F ++ DF + ++ Y+++LL+ L +C
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 303
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 62 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 15/230 (6%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKAL 241
PNIVKLLD++ + L+FE ++ D K + + + Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLS-MDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 300
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 15/230 (6%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKAL 241
PNIVKLLD++ + L+FE ++ D K + + + Y+++LL+ L
Sbjct: 63 NHPNIVKLLDVIHTENKL--YLVFEFLS-MDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELL 300
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ + Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 227
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 118/229 (51%), Gaps = 13/229 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALD 242
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L
Sbjct: 61 NHPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLV 301
+CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 225
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 9/227 (3%)
Query: 131 GEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLC 186
G ++++ V K+G G Y V++ + E L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYC 244
PNIVKLLD++ + F ++ DF + ++ Y+++LL+ L +C
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 303
HS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 226
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 189 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 248
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 249 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 275
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLC-----GGPN 190
YE + K+G G Y VF+ + +E L+ +C N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKN 62
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKALDYCHSQ 247
IV+L D++ + T L+FE + K D D V+ ++++LLK L +CHS+
Sbjct: 63 IVRLHDVLHSDKKLT--LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDY 306
++HRD+KP N++I+ +L+L D+GLA F P + Y+ V + +++ P++L + Y
Sbjct: 121 NVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 307 DYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
S+D+WS GC+FA + P F G+D DQL +I ++LGT
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGT 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 18/227 (7%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLC--------G 187
YE V ++G G Y +VF+ + ++ +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 188 GPNIVKLLDIV---RDQQSKTPSLIFEHVNN--TDF--KVLYPTLSDYDVRYYIYELLKA 240
PN+V+L D+ R + +L+FEHV+ T + KV P + ++ +++LL+
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++ PE+L
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y +DLWS+GC+FA M FR++P F G + DQL KI V+G
Sbjct: 192 LQ-SSYATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 18/227 (7%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLC--------G 187
YE V ++G G Y +VF+ + ++ +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 188 GPNIVKLLDIV---RDQQSKTPSLIFEHVNN--TDF--KVLYPTLSDYDVRYYIYELLKA 240
PN+V+L D+ R + +L+FEHV+ T + KV P + ++ +++LL+
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++ PE+L
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y +DLWS+GC+FA M FR++P F G + DQL KI V+G
Sbjct: 192 LQ-SSYATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 9/224 (4%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
NIVKLLD++ + F H + DF + ++ Y+++LL+ L +CHS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDY 306
++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ + Y
Sbjct: 123 RVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 307 DYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 182 STAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 18/227 (7%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLC--------G 187
YE V ++G G Y +VF+ + ++ +
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 188 GPNIVKLLDIV---RDQQSKTPSLIFEHVNN--TDF--KVLYPTLSDYDVRYYIYELLKA 240
PN+V+L D+ R + +L+FEHV+ T + KV P + ++ +++LL+
Sbjct: 73 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
LD+ HS ++HRD+KP N+++ +++L D+GLA Y V + +++ PE+L
Sbjct: 133 LDFLHSHRVVHRDLKPQNILVTSSG-QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y +DLWS+GC+FA M FR++P F G + DQL KI V+G
Sbjct: 192 LQ-SSYATPVDLWSVGCIFAEM-FRRKPLFRGSSDVDQLGKILDVIG 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 166
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 167 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 226
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 227 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 253
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 70 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 128 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 231
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCG 187
+ ++++ V K+G G Y V++ + E L
Sbjct: 5 DMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 188 GPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDY 243
PNIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +
Sbjct: 65 HPNIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVD 302
CHS ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 114 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 173
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 174 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 233
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 234 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 260
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 133 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 192
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 193 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 252
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 253 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 279
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 131 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 190
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 191 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 250
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 251 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 277
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 103 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 162
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 163 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 222
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 223 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 249
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 70 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 128 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 231
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 174 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 233
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 234 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 293
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 294 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 320
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 62 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 188
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 189 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 248
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 249 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 275
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 107 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 166
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 167 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 226
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 227 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 253
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 123 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 182
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 183 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 242
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 243 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 269
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 62 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 62 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 100 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 159
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 160 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 219
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 220 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 246
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 96 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 155
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 156 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 215
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 216 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 242
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 99 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 158
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 159 LDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 218
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 219 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 245
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 62 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 108 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 167
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 168 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 227
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 228 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 254
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX----XXXXXXXXXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 62 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
++++ V K+G G Y V++ + E L P
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-YPTLSDYD---VRYYIYELLKALDYCH 245
NIVKLLD++ + L+FE ++ K + L+ ++ Y+++LL+ L +CH
Sbjct: 63 NIVKLLDVIHTENKL--YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
S ++HRD+KP N++I+ E ++L D+GLA F P + Y V + +++ PE+L+ +
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
Y ++D+WSLGC+FA M+ R+ F G DQL +I + LGT +
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA-LFPGDSEIDQLFRIFRTLGTPD 224
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 207 SLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
+L+ ++V T ++V TL V+ Y+Y+L ++L Y HS GI HRD+KP N++
Sbjct: 95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLL 154
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFA 320
+D + L+L D+G A+ G+ + SRY++ PEL+ DY S+D+WS GC+ A
Sbjct: 155 LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 321 GMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ +P F G DQLV+I KVLGT
Sbjct: 215 ELLL-GQPIFPGDSGVDQLVEIIKVLGT 241
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLC-----GGPN 190
YE + K+G G Y VF+ + +E L+ +C N
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA-LREICLLKELKHKN 62
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKALDYCHSQ 247
IV+L D++ + T L+FE + K D D V+ ++++LLK L +CHS+
Sbjct: 63 IVRLHDVLHSDKKLT--LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDY 306
++HRD+KP N++I+ +L+L ++GLA F P + Y+ V + +++ P++L + Y
Sbjct: 121 NVLHRDLKPQNLLINRNG-ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 307 DYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
S+D+WS GC+FA + P F G+D DQL +I ++LGT
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 100/164 (60%), Gaps = 10/164 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT----LSDYDVRYYIYELLKALDYCH 245
NIVKL D++ + K L+FEH++ D K L L + ++ +LL + YCH
Sbjct: 61 NIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
+ ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P++L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+FA M+ P F G DQL++I ++LGT
Sbjct: 177 KYSTTIDIWSVGCIFAEMV-NGAPLFPGVSEADQLMRIFRILGT 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 100/164 (60%), Gaps = 10/164 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT----LSDYDVRYYIYELLKALDYCH 245
NIVKL D++ + K L+FEH++ D K L L + ++ +LL + YCH
Sbjct: 61 NIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
+ ++HRD+KP N++I+ E +L++ D+GLA F P ++Y V + +++ P++L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+FA M+ P F G DQL++I ++LGT
Sbjct: 177 KYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRILGT 219
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 100/164 (60%), Gaps = 10/164 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT----LSDYDVRYYIYELLKALDYCH 245
NIVKL D++ + K L+FEH++ D K L L + ++ +LL + YCH
Sbjct: 61 NIVKLYDVIHTK--KRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 304
+ ++HRD+KP N++I+ E +L++ D+GLA F P ++Y + + +++ P++L+ +
Sbjct: 118 DRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+FA M+ P F G DQL++I ++LGT
Sbjct: 177 KYSTTIDIWSVGCIFAEMV-NGTPLFPGVSEADQLMRIFRILGT 219
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 98/163 (60%), Gaps = 8/163 (4%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT--DFKVLYPTLSDYDV-RYYIYELLKALDYCHS 246
N+V LL++ + + K L+FE V++T D L+P DY V + Y+++++ + +CHS
Sbjct: 85 NLVNLLEVCK--KKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 247 QGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQD 305
I+HRD+KP N+++ + ++L D+G A PG+ Y+ VA+R+++ PELLV
Sbjct: 143 HNIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+W++GC+ M F EP F G + DQL I LG
Sbjct: 202 YGKAVDVWAIGCLVTEM-FMGEPLFPGDSDIDQLYHIMMCLGN 243
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 190 NIVKLLDIVRDQQS--------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
N++ LLD+ S +L+ +NN V LSD V++ +Y+LL+ L
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI---VKSQALSDEHVQFLVYQLLRGL 144
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 301
Y HS GI+HRD+KP NV ++ E +LR++D+GLA +E VA+R+++ PE+++
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIML 201
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ Y+ ++D+WS+GC+ A ++ + + F G D DQL +I +V+GT
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGT 247
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 190 NIVKLLDIVRDQQS--------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
N++ LLD+ S +L+ +NN V LSD V++ +Y+LL+ L
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI---VKCQALSDEHVQFLVYQLLRGL 144
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 301
Y HS GI+HRD+KP NV ++ E +LR++D+GLA +E VA+R+++ PE+++
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVN-EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIML 201
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ Y+ ++D+WS+GC+ A ++ + + F G D DQL +I +V+GT
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGT 247
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 99/165 (60%), Gaps = 10/165 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP----TLSDYDVRYYIYELLKALDYC 244
PNI+ LLD + + SL+F+ + TD +V+ L+ ++ Y+ L+ L+Y
Sbjct: 72 PNIIGLLDAFGHKSNI--SLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 303
H I+HRD+KP+N+++D E L+L D+GLA+ F P + Y +V +R+++ PELL
Sbjct: 129 HQHWILHRDLKPNNLLLD-ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGA 187
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ Y +D+W++GC+ A ++ R PF G + DQL +I + LGT
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRV-PFLPGDSDLDQLTRIFETLGT 231
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 100/167 (59%), Gaps = 15/167 (8%)
Query: 190 NIVKLLDIVRDQQS--------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
N++ LLD+ S +L+ +NN V LSD V++ +Y+LL+ L
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI---VKCQALSDEHVQFLVYQLLRGL 136
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 301
Y HS GI+HRD+KP NV ++ E +LR++D+GLA +E VA+R+++ PE+++
Sbjct: 137 KYIHSAGIIHRDLKPSNVAVN-EDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIML 193
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ Y+ ++D+WS+GC+ A ++ + + F G D DQL +I +V+GT
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELL-QGKALFPGSDYIDQLKRIMEVVGT 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 134 DDYEVVRKVGRGKYSEVFEG-VHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNL--CGGPN 190
+ Y + K+G G Y+ V++G TDN + L N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSD-------YDVRYYIYELLKALDY 243
IV L DI+ ++S T L+FE+++ K L L D ++V+ ++++LL+ L Y
Sbjct: 62 IVTLHDIIHTEKSLT--LVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVD 302
CH Q ++HRD+KP N++I+ E+ +L+L D+GLA P K Y+ V + +++ P++L+
Sbjct: 116 CHRQKVLHRDLKPQNLLIN-ERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
DY +D+W +GC+F M + P F G +QL I ++LGT
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVEEQLHFIFRILGT 219
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 14/225 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXX----XXXXXXXLQNLCGGP 189
D Y + K+G G Y EV++ + NE L
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL--YPTLSDYDVRYYIYELLKALDYCHSQ 247
NI++L ++ + LIFE+ N K + P +S ++ ++Y+L+ +++CHS+
Sbjct: 94 NIIELKSVI--HHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 248 GIMHRDVKPHNVMID----HEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVD 302
+HRD+KP N+++ E L++ D+GLA F P +++ + + +++ PE+L+
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y S+D+WS+ C++A M+ K P F G DQL KI +VLG
Sbjct: 212 SRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFEVLG 255
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 16/225 (7%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDN---EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIV 192
++ + K+G G Y+ V++G++ T L NIV
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 193 KLLDIVRDQQSKTPSLIFEHVNN-----TDFKVLYPTLSDYD---VRYYIYELLKALDYC 244
+L D++ + T L+FE ++N D + + T + V+Y+ ++LL+ L +C
Sbjct: 67 RLYDVIHTENKLT--LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDL 303
H I+HRD+KP N++I+ ++ +L+L D+GLA F P ++ V + +++ P++L+
Sbjct: 125 HENKILHRDLKPQNLLIN-KRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ Y S+D+WS GC+ A MI K P F G ++ +QL I ++GT
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGK-PLFPGTNDEEQLKLIFDIMGT 227
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVN---NTDF-KVLYPTLSDYDVRYYIYELLKALDYCH 245
N++ LLD+ S F V TD K++ S+ ++Y +Y++LK L Y H
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S G++HRD+KP N+ ++ E +L+++D+GLA H E V +R+++ PE+++
Sbjct: 162 SAGVVHRDLKPGNLAVN-EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMH 218
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
Y+ ++D+WS+GC+ A M+ K F G D DQL +I KV G
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKT-LFKGKDYLDQLTQILKVTG 259
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 8/162 (4%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVN---NTDF-KVLYPTLSDYDVRYYIYELLKALDYCH 245
N++ LLD+ S F V TD K++ S+ ++Y +Y++LK L Y H
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S G++HRD+KP N+ ++ E +L+++D+GLA H E V +R+++ PE+++
Sbjct: 144 SAGVVHRDLKPGNLAVN-EDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMH 200
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
Y+ ++D+WS+GC+ A M+ K F G D DQL +I KV G
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKT-LFKGKDYLDQLTQILKVTG 241
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 189 PNIVKLLDIV---RDQQSKTPSLIFEHVNNTDF-----KVLYPTLSDYDVRYYIYELLKA 240
PN+V+L+D+ R + +L+FEHV+ D K P L ++ + + L+
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+L
Sbjct: 133 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVL 191
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y +D+WS+GC+FA M FR++P F G+ DQL KI ++G
Sbjct: 192 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 236
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 95/167 (56%), Gaps = 12/167 (7%)
Query: 189 PNIVKLLDIV---RDQQSKTPSLIFEHVNNTDF-----KVLYPTLSDYDVRYYIYELLKA 240
PN+V+L+D+ R + +L+FEHV+ D K P L ++ + + L+
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y + V + +++ PE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y +D+WS+GC+FA M FR++P F G+ DQL KI ++G
Sbjct: 184 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 228
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 189 PNIVKLLDIV---RDQQSKTPSLIFEHVNNTDF-----KVLYPTLSDYDVRYYIYELLKA 240
PN+V+L+D+ R + +L+FEHV+ D K P L ++ + + L+
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y +D+WS+GC+FA M FR++P F G+ DQL KI ++G
Sbjct: 184 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 228
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
Query: 230 VRYYIYELLKALDYCH--SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV 287
++ ++++L++++ H S + HRD+KPHNV+++ L+L D+G A+ P +
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
Query: 288 RVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ SRY++ PEL+ Q Y ++D+WS+GC+FA M+ EP F G ++ QL +I +VLG
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML-GEPIFRGDNSAGQLHEIVRVLG 249
Query: 348 --TDELNAYLNKYHIELD 363
+ E+ LN H ++D
Sbjct: 250 CPSREVLRKLNPSHTDVD 267
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 148 HSADIIHRDLKPSNLAVN-EDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 144 HSADIIHRDLKPSNLAVN-EDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 149 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 152
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 153 HSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 252
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 149 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 147 HSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 149 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 147 HSADIIHRDLKPSNLAVN-EDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGXVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYI 137
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 138 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNAM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 162 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMXGXVATRWYRAPEIMLNWM 218
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 261
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 162 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 261
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 12/167 (7%)
Query: 189 PNIVKLLDIV---RDQQSKTPSLIFEHVNNTDF-----KVLYPTLSDYDVRYYIYELLKA 240
PN+V+L+D+ R + +L+FEHV+ D K P L ++ + + L+
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
LD+ H+ I+HRD+KP N+++ ++L D+GLA Y V + +++ PE+L
Sbjct: 125 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ Y +D+WS+GC+FA M FR++P F G+ DQL KI ++G
Sbjct: 184 LQ-STYATPVDMWSVGCIFAEM-FRRKPLFCGNSEADQLGKIFDLIG 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDYGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 162 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 261
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 154 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 253
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 164
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 165 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 221
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 264
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 144 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 104/179 (58%), Gaps = 15/179 (8%)
Query: 190 NIVKLLDIVRD---QQSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYC 244
NI+ + DI+R +Q K L+ H+ D L T LS+ + Y++Y++L+ L Y
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELL 300
HS ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE++
Sbjct: 161 HSANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
++ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 154 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 253
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 154 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 253
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 147 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 140
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 141 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 197
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 160
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 161 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 260
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 139
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 140 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 196
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 149 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 205
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 248
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 147 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 246
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 25/172 (14%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP-------------TLSDYDVRYYIYE 236
N++ LLD+ TP + + TDF ++ P L + +++ +Y+
Sbjct: 85 NVIGLLDVF------TPDETLD--DFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 136
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+LK L Y H+ GI+HRD+KP N+ ++ E +L+++D+GLA E V +R+++
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVN-EDCELKILDFGLAR--QADSEMXGXVVTRWYRA 193
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
PE++++ Y ++D+WS+GC+ A MI K F G D+ DQL +I KV GT
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKT-LFKGSDHLDQLKEIMKVTGT 244
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 138 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 138
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 139 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 238
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 152
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 153 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 252
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 160
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 161 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 260
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 148 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 138
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 139 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 138 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 151
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 152 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 208
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 251
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 144 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 144 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 148 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 148 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 247
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 105/173 (60%), Gaps = 19/173 (10%)
Query: 190 NIVKLLDIVRDQ----QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDY 243
NI+ + DI+R + K+ ++ + + + ++++ + L+ VRY++Y+LL+ L Y
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA--------EFYHPGKEYNVRVASRYFK 295
HS ++HRD+KP N++++ E +L++ D+G+A E + EY VA+R+++
Sbjct: 174 MHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEY---VATRWYR 229
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
PEL++ L +Y ++DLWS+GC+F M+ R++ F G + QL I VLGT
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKNYVHQLQLIMMVLGT 281
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D + + L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GL H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDSELKILDFGLCR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 103/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
N++ + DI+R ++ I + + TD L + LS+ + Y++Y++L+ L Y H
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++I+ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 162 SANVLHRDLKPSNLLIN-TTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 164
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 165 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMXGYVATRWYRAPEIMLNWM 221
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 264
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 105/173 (60%), Gaps = 19/173 (10%)
Query: 190 NIVKLLDIVRDQ----QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDY 243
NI+ + DI+R + K+ ++ + + + ++++ + L+ VRY++Y+LL+ L Y
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA--------EFYHPGKEYNVRVASRYFK 295
HS ++HRD+KP N++++ E +L++ D+G+A E + EY VA+R+++
Sbjct: 175 MHSAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEY---VATRWYR 230
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
PEL++ L +Y ++DLWS+GC+F M+ R++ F G + QL I VLGT
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-LFPGKNYVHQLQLIMMVLGT 282
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 138 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWM 194
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 237
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDAGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDGGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDRGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYN----VRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYN----VRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 147 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 144 SANVLHRDLKPSNLLLN-TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCGIN 259
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 101/178 (56%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 140 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE---LNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ E LN +N
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPEQEDLNCIIN 255
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 144 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 259
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 144 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 259
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 162 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 147 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 148 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 263
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 139 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 254
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 140 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 255
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 98/170 (57%), Gaps = 21/170 (12%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNN---------TDFK--VLYPTLSDYDVRYYIYELL 238
N++ LLD+ TP+ E N+ D V L+D V++ IY++L
Sbjct: 111 NVIGLLDVF------TPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 164
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+ L Y HS I+HRD+KP N+ ++ E +L+++D+GLA H E VA+R+++ PE
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLAR--HTDDEMTGYVATRWYRAPE 221
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++++ Y+ ++D+WS+GC+ A ++ + F G D+ +QL +I ++ GT
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRT-LFPGTDHINQLQQIMRLTGT 270
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 150 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 265
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R + I + + TD L T LS+ + Y++Y++L+ L Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 142 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 105/178 (58%), Gaps = 13/178 (7%)
Query: 190 NIVKLLDIVRD---QQSKTPSLIFEHVNNTDFKVLYPT-LSDYDVRYYIYELLKALDYCH 245
NI+ + DI+R +Q K ++ + + +K+L LS+ + Y++Y++L+ L Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLV 301
S ++HRD+KP N++++ L++ D+GLA P ++ VA+R+++ PE+++
Sbjct: 146 SANVLHRDLKPSNLLLN-TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT---DELNAYLN 356
+ + Y S+D+WS+GC+ A M+ + P F G DQL I +LG+ ++LN +N
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++ +GLA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILGFGLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 40/244 (16%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXX-----XXXXXXXXXXXXXXXLQNLCGGPN 190
YE+V+K+G+G Y V++ + E L L G N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT-LSDYDVRYYIYELLKALDYCHSQGI 249
IV LL+++R + L+F+++ V+ L +Y +Y+L+K + Y HS G+
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGL 130
Query: 250 MHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR--------------------- 288
+HRD+KP N++++ E +++ D+GL+ + N+R
Sbjct: 131 LHRDMKPSNILLNAECH-VKVADFGLSRSF-----VNIRRVTNNIPLSINENTENFDDDQ 184
Query: 289 ------VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
VA+R+++ PE+L+ Y +D+WSLGC+ G I +P F G +QL +I
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL-GEILCGKPIFPGSSTMNQLERI 243
Query: 343 AKVL 346
V+
Sbjct: 244 IGVI 247
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 8/163 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL---YPTLSDYDVRYYIYELLKALDYCH 245
PN+V LL++ R + + L+FE+ ++T L + ++ V+ ++ L+A+++CH
Sbjct: 62 PNLVNLLEVFR--RKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLVDLQ 304
+HRDVKP N++I + ++L D+G A P Y+ VA+R+++ PELLV
Sbjct: 120 KHNCIHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
Y +D+W++GC+FA ++ P + G + DQL I K LG
Sbjct: 179 QYGPPVDVWAIGCVFAELL-SGVPLWPGKSDVDQLYLIRKTLG 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 190 NIVKLLDI---VRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
N++ LLD+ R + + H+ D V L+D V++ IY++L+ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
HS I+HRD+KP N+ ++ E +L+++D+ LA H E VA+R+++ PE++++
Sbjct: 142 HSADIIHRDLKPSNLAVN-EDCELKILDFYLAR--HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y+ ++D+WS+GC+ A ++ + F G D+ DQL I +++GT
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT-LFPGTDHIDQLKLILRLVGT 241
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + +I R ++ I + + TD + T LSD ++Y+IY+ L+A+ H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR-----------VASRYF 294
++HRD+KP N++I+ L++ D+GLA N VA+R++
Sbjct: 130 GSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ PE+++ Y ++D+WS GC+ A + R+ P F G D QL+ I ++GT
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGT 241
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + +I R ++ I + + TD + T LSD ++Y+IY+ L+A+ H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR-----------VASRYF 294
++HRD+KP N++I+ L++ D+GLA N VA+R++
Sbjct: 130 GSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ PE+++ Y ++D+WS GC+ A + R+ P F G D QL+ I ++GT
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGT 241
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 190 NIVKLLDIVRDQ--QSKTPSLIFEHVNNTDFKVLYPT--LSDYDVRYYIYELLKALDYCH 245
NI+ + +I R ++ I + + TD + T LSD ++Y+IY+ L+A+ H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR-----------VASRYF 294
++HRD+KP N++I+ L++ D+GLA N VA+R++
Sbjct: 130 GSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
+ PE+++ Y ++D+WS GC+ A + R+ P F G D QL+ I ++GT
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGIIGT 241
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 137 SAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 194
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 195 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 236
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V++ L + Y +Y++L + + H
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 141
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 142 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGM-G 199
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ G + + F G D+ DQ K+ + LGT
Sbjct: 200 YKENVDIWSVGCIM-GELVKGSVIFQGTDHIDQWNKVIEQLGT 241
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYEL 237
L + NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 238 LKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
E+++ + Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++DLWS+GC+ M+ K F G D DQ K+ + LGT
Sbjct: 202 YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGT 243
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 182 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 239
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 240 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 281
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 182 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 239
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 240 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 281
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 7/171 (4%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYEL 237
L + NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 238 LKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
E+++ + Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 138 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 196 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 237
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 145 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 203 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 244
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 137 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 194
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 195 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 236
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 145 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 203 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 244
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 143 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 200
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 201 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 242
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 149 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 206
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++DLWS+GC+ M+ K F G D DQ K+ + LGT
Sbjct: 207 YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGT 248
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V+ L + Y +Y++L + + H
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 138 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ R + F G D DQ K+ + LGT
Sbjct: 196 YKENVDIWSVGCIMGEMV-RHKILFPGRDYIDQWNKVIEQLGT 237
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ M+ K F G D DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGT 243
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 138 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++DLWS+GC+ M+ K F G D DQ K+ + LGT
Sbjct: 196 YKENVDLWSVGCIMGEMVCHK-ILFPGRDYIDQWNKVIEQLGT 237
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXX----XXXXXXXLQNLCG 187
E YE + K+G+G + EVF+ H + + L
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 188 GPNIVKLLDIVRDQQSK------TPSLIFEHVNNTDFKVLYPTLSDY---DVRYYIYELL 238
N+V L++I R + S + L+F+ + +L L + +++ + LL
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-----EYNVRVASRY 293
L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV + +
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNA 353
++ PELL+ +DY +DLW GC+ A M + + P G+ QL I+++ G+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 354 YLNKYHIELDPHLAALVGR 372
+ N + EL L + G+
Sbjct: 254 WPNVDNYELYEKLELVKGQ 272
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXX----XXXXXXXLQNLCG 187
E YE + K+G+G + EVF+ H + + L
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 188 GPNIVKLLDIVRDQQS------KTPSLIFEHVNNTDFKVLYPTLSDY---DVRYYIYELL 238
N+V L++I R + S + L+F+ + +L L + +++ + LL
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-----EYNVRVASRY 293
L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV + +
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNA 353
++ PELL+ +DY +DLW GC+ A M + + P G+ QL I+++ G+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 354 YLNKYHIELDPHLAALVGR 372
+ N + EL L + G+
Sbjct: 254 WPNVDNYELYEKLELVKGQ 272
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 145 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 202
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 203 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 244
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXX----XXXXXXXLQNLCG 187
E YE + K+G+G + EVF+ H + + L
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 74
Query: 188 GPNIVKLLDIVRDQQSK------TPSLIFEHVNNTDFKVLYPTLSDY---DVRYYIYELL 238
N+V L++I R + S + L+F+ + +L L + +++ + LL
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-----EYNVRVASRY 293
L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV + +
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNA 353
++ PELL+ +DY +DLW GC+ A M + + P G+ QL I+++ G+
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEV 252
Query: 354 YLNKYHIELDPHLAALVGR 372
+ N + EL L + G+
Sbjct: 253 WPNVDNYELYEKLELVKGQ 271
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 93/163 (57%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q++ + L+ E ++ +V++ L + Y +Y++L + + H
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ G + + F G D+ DQ K+ + LGT
Sbjct: 202 YAANVDIWSVGCIM-GELVKGCVIFQGTDHIDQWNKVIEQLGT 243
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 144 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-G 201
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 202 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXX----XXXXXXXLQNLCG 187
E YE + K+G+G + EVF+ H + + L
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 188 GPNIVKLLDIVRDQQSK------TPSLIFEHVNNTDFKVLYPTLSDY---DVRYYIYELL 238
N+V L++I R + S + L+F+ + +L L + +++ + LL
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-----EYNVRVASRY 293
L Y H I+HRD+K NV+I + L+L D+GLA + K Y RV + +
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNA 353
++ PELL+ +DY +DLW GC+ A M + + P G+ QL I+++ G+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 354 YLNKYHIELDPHLAALVGR 372
+ N + EL L + G+
Sbjct: 254 WPNVDNYELYEKLELVKGQ 272
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 7/163 (4%)
Query: 190 NIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++L + + H
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
S GI+HRD+KP N+++ + L+++D+GLA V +RY++ PE+++ +
Sbjct: 146 SAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGM-G 203
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
Y ++D+WS+GC+ MI + F G D+ DQ K+ + LGT
Sbjct: 204 YKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 245
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 188 GPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY---PTLSDYDVRYYIYELLKALDYC 244
GP+ +L D V I + TD + P L ++ R ++Y+LL+ L Y
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEH-ARLFMYQLLRGLKYI 136
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA----SRYFKGPELL 300
HS ++HRD+KP N+ I+ E L++ D+GLA P + ++ +++++ P LL
Sbjct: 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL 196
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
+ +Y ++D+W+ GC+FA M+ K F H+
Sbjct: 197 LSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 7/171 (4%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYEL 237
L + NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 238 LKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
E+++ + Y ++D+WS+G + MI + F G D+ DQ K+ + LGT
Sbjct: 195 EVILGM-GYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 7/171 (4%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQS----KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYEL 237
L + NI+ LL++ Q+S + ++ E ++ +V+ L + Y +Y++
Sbjct: 76 LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 238 LKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
E+++ + Y ++D+WS+G + MI + F G D+ DQ K+ + LGT
Sbjct: 195 EVILGM-GYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVIEQLGT 243
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 189
+Y++V+ +G G + +V H T + + L P
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT--DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+I+KL D+++ + ++ E+ N D+ V +S+ + R + +++ A++YCH
Sbjct: 74 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+KP N+++D E +++ D+GL+ G S + PE++
Sbjct: 132 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + M+ R+ PF
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPF 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 189
+Y++V+ +G G + +V H T + + L P
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT--DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+I+KL D+++ + ++ E+ N D+ V +S+ + R + +++ A++YCH
Sbjct: 65 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 122
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+KP N+++D E +++ D+GL+ G S + PE++
Sbjct: 123 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + M+ R+ PF
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPF 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 189
+Y++V+ +G G + +V H T + + L P
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT--DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+I+KL D+++ + ++ E+ N D+ V +S+ + R + +++ A++YCH
Sbjct: 75 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 132
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+KP N+++D E +++ D+GL+ G S + PE++
Sbjct: 133 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + M+ R+ PF
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPF 213
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 18/163 (11%)
Query: 189 PNIVKLLDIVRDQQS-------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI+KL +I+ D S T +F+ + + S++D I ++ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGI 134
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y H I+HRD+KP N++++ +++ +++ID+GL+ + + R+ + Y+ PE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
L YD D+WS G + ++ P FYG + YD L ++
Sbjct: 195 LRGT--YDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRV 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQN-----LCGGP 189
+Y++V+ +G G + +V H T + + L P
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT--DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+I+KL D+++ + ++ E+ N D+ V +S+ + R + +++ A++YCH
Sbjct: 69 HIIKLYDVIKSKDEII--MVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 126
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+KP N+++D E +++ D+GL+ G S + PE++
Sbjct: 127 KIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + M+ R+ PF
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPF 207
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
+S ++Y++Y +L L H G++HRD+ P N+++ + + + D+ LA
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADA 188
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
V R+++ PEL++ + + +D+WS GC+ A M F ++ F G Y+QL KI
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGSTFYNQLNKIV 247
Query: 344 KVLGTDEL 351
+V+GT ++
Sbjct: 248 EVVGTPKI 255
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
+S ++Y++Y +L L H G++HRD+ P N+++ + + + D+ LA
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA-DNNDITICDFNLAREDTADA 188
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIA 343
V R+++ PEL++ + + +D+WS GC+ A M F ++ F G Y+QL KI
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGSTFYNQLNKIV 247
Query: 344 KVLGTDEL 351
+V+GT ++
Sbjct: 248 EVVGTPKI 255
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 130 WGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNL 185
W D YE+ +G G Y V E + + N
Sbjct: 49 WQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNR 108
Query: 186 CGGPNIVKLLDIV--RDQQSKTPSLIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKA 240
++VK+LDIV +D + + + ++DFK L+ T L++ ++ +Y LL
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE----------------------- 277
+ Y HS GI+HRD+KP N +++ + +++ D+GLA
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 278 --FYHPG---KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
F H ++ V +R+++ PEL++ ++Y ++D+WS+GC+FA ++
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 18/163 (11%)
Query: 189 PNIVKLLDIVRDQQS-------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI+KL +I+ D S T +F+ + + S++D I ++ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGI 134
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y H I+HRD+KP N++++ +++ +++ID+GL+ + + R+ + Y+ PE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
L YD D+WS G + ++ P FYG + YD L ++
Sbjct: 195 LRGT--YDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRV 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 29/168 (17%)
Query: 212 HVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLI 271
++ + F + +LS +VR Y+ L KAL H GI+HRDVKP N + + +K L+
Sbjct: 101 YLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALV 160
Query: 272 DWGLAEFYHPGK-----------------------------EYNVRVASRYFKGPELLVD 302
D+GLA+ H K + R + F+ PE+L
Sbjct: 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK 220
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDE 350
+ ++D+WS G +F ++ + PF+ D+ L +I + G+ E
Sbjct: 221 CPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRE 268
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 18/163 (11%)
Query: 189 PNIVKLLDIVRDQQS-------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI+KL +I+ D S T +F+ + + S++D I ++ +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGI 134
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y H I+HRD+KP N++++ +++ +++ID+GL+ + + R+ + Y+ PE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
L YD D+WS G + ++ P FYG + YD L ++
Sbjct: 195 LRGT--YDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDILKRV 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 140 RKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVR 199
+ +G G +S + VH N+ L+ G PNIVKL ++
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 200 DQQSKTPSLIFEHVNNTD-FKVLYPT--LSDYDVRYYIYELLKALDYCHSQGIMHRDVKP 256
DQ L+ E +N + F+ + S+ + Y + +L+ A+ + H G++HRD+KP
Sbjct: 77 DQLHTF--LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 257 HNVMIDHEQRKL--RLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQDYDYSLDLW 313
N++ E L ++ID+G A P + + ++ PELL + YD S DLW
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGYDESCDLW 193
Query: 314 SLGCMFAGMIFRKEPFFYGHD 334
SLG + M+ + P F HD
Sbjct: 194 SLGVILYTMLSGQVP-FQSHD 213
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNN---TDFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN+VKL++++ D ++FE VN + L P LS+ R+Y +L+K ++Y H
Sbjct: 96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIKGIEYLH 154
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQ 304
Q I+HRD+KP N+++ E +++ D+G++ EF + V + F PE L + +
Sbjct: 155 YQKIIHRDIKPSNLLVG-EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR 213
Query: 305 DY--DYSLDLWSLGCMFAGMIFRKEPFF 330
+LD+W++G +F + PF
Sbjct: 214 KIFSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 136 YEVVRKVGRGKYSEVF----EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNI 191
Y+ V+K+G G Y EV + H + L PNI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 192 VKLLDIVRDQQS--------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDY 243
+KL D D+++ K L E ++ F ++ D I ++L + Y
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF-------NEVDAAVIIKQVLSGVTY 151
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 301
H I+HRD+KP N++++ +++ ++++D+GL+ + K+ R+ + Y+ PE+L
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL- 210
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ YD D+WS+G + ++ P F G + + L K+ K
Sbjct: 211 -RKKYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKVEK 251
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 189 PNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI+KL + D+ + T +F+ + + S+ D I ++L +
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIRQVLSGI 162
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ + Y+ PE+
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 222
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
L YD D+WS G + ++ P F G + YD L K+ K
Sbjct: 223 LHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 264
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 189 PNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI+KL + D+ + T +F+ + + S+ D I ++L +
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIRQVLSGI 163
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ + Y+ PE+
Sbjct: 164 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV 223
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
L YD D+WS G + ++ P F G + YD L K+ K
Sbjct: 224 LHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 265
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 25/233 (10%)
Query: 134 DDYEVVRKVGRGKYSEVF------EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCG 187
D Y+ R +G+G + EV G C L+ L
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-D 90
Query: 188 GPNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKA 240
PNI+KL + D+ + T +F+ + + S+ D I ++L
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIRQVLSG 144
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+ Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ + Y+ PE
Sbjct: 145 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 204
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
+L YD D+WS G + ++ P F G + YD L K+ K T EL
Sbjct: 205 VLHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTFEL 254
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 77/134 (57%), Gaps = 17/134 (12%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYH----PG 282
V+ +Y++L + Y H+ ++HRD+KP N+++ E+ ++++ D G A ++ P
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD-------- 334
+ + V + +++ PELL+ + Y ++D+W++GC+FA ++ EP F+
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNP 248
Query: 335 -NYDQLVKIAKVLG 347
++DQL +I V+G
Sbjct: 249 YHHDQLDRIFNVMG 262
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK-LRLIDWGLAEFYHPGKEYNVR 288
VR + + +L+ LD H I+H D+KP N+++ + R +++ID+G + + H +
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYTX 259
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ SR+++ PE+++ + Y +D+WSLGC+ A ++ P G D DQL + ++LG
Sbjct: 260 IQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLG 316
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 25/226 (11%)
Query: 134 DDYEVVRKVGRGKYSEVF------EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCG 187
D Y+ R +G+G + EV G C L+ L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-D 84
Query: 188 GPNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKA 240
PNI+KL + D+ + T +F+ + + S+ D I ++L
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIRQVLSG 138
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+ Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ + Y+ PE
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPE 198
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+L YD D+WS G + ++ P F G + YD L K+ K
Sbjct: 199 VLHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEK 241
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK-LRLIDWGLAEFYHPGKEYNVR 288
VR + + +L+ LD H I+H D+KP N+++ + R +++ID+G + + H +
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYTX 259
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ SR+++ PE+++ + Y +D+WSLGC+ A ++ P G D DQL + ++LG
Sbjct: 260 IQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLG 316
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 29/161 (18%)
Query: 191 IVKLLD-IVRDQQSKTPSL-IFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKALDYCH 245
I++L D I+ D K L I + ++D K L+ T L++ ++ +Y LL ++ H
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV------------------ 287
GI+HRD+KP N +++ + +++ D+GLA + K+ N+
Sbjct: 147 ESGIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 288 -----RVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
V +R+++ PEL++ ++Y S+D+WS GC+FA ++
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK-LRLIDWGLAEFYHPGKEYNVR 288
VR + + +L+ LD H I+H D+KP N+++ + R +++ID+G + + H +
Sbjct: 202 VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYXX 259
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLG 347
+ SR+++ PE+++ + Y +D+WSLGC+ A ++ P G D DQL + ++LG
Sbjct: 260 IQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQLACMIELLG 316
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 7/118 (5%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVKI 342
V + + PELL + + S DLW+LGC+ ++ PF G++ + +++K+
Sbjct: 193 XFVGTAQYVSPELLTE-KSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 18/172 (10%)
Query: 189 PNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI KL + D+ + T +F+ + + S+ D I ++L +
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIRQVLSGI 139
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y H I+HRD+KP N++++ + + +R+ID+GL+ + K+ ++ + Y+ PE+
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEV 199
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
L YD D+WS G + ++ P F G + YD L K+ K T EL
Sbjct: 200 LHGT--YDEKCDVWSTGVILY-ILLSGCPPFNGANEYDILKKVEKGKYTFEL 248
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 189 PNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI++L + D + T +FE V V + D + ++L A+
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELFERV------VHKRVFRESDAARIMKDVLSAV 136
Query: 242 DYCHSQGIMHRDVKPHNVMI--DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
YCH + HRD+KP N + D L+LID+GLA + PGK +V + Y+ P++
Sbjct: 137 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 196
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYH 359
L L Y D WS G M ++ PF D + ++KI + T +LN
Sbjct: 197 LEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDX-EVMLKIREGTFTFPEKDWLN--- 250
Query: 360 IELDPHLAALVGRLVILS 377
+ P +L+ RL+ S
Sbjct: 251 --VSPQAESLIRRLLTKS 266
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 189 PNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI++L + D + T +FE V V + D + ++L A+
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELFERV------VHKRVFRESDAARIMKDVLSAV 119
Query: 242 DYCHSQGIMHRDVKPHNVMI--DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
YCH + HRD+KP N + D L+LID+GLA + PGK +V + Y+ P++
Sbjct: 120 AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV 179
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYH 359
L L Y D WS G M ++ PF D + ++KI + T +LN
Sbjct: 180 LEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDX-EVMLKIREGTFTFPEKDWLN--- 233
Query: 360 IELDPHLAALVGRLVILS 377
+ P +L+ RL+ S
Sbjct: 234 --VSPQAESLIRRLLTKS 249
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 193 SFVGTAQYVSPELLTE-KSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVF------EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQN 184
G D Y+ V+K+G G Y EV G L+
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 185 LCGGPNIVKLLDIVRDQQSKTPSL-IFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDY 243
L PNI+KL + D+++ + ++ D +L S+ D + ++L Y
Sbjct: 78 L-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 301
H I+HRD+KP N++++ + R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL- 195
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ YD D+WS G + ++ P F G + + L ++ K
Sbjct: 196 -RKKYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEK 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 7/118 (5%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVKI 342
V + + PELL + + S DLW+LGC+ ++ PF G++ + +++K+
Sbjct: 193 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 83/142 (58%), Gaps = 11/142 (7%)
Query: 209 IFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHEQR 266
+++ + NT+F+ + L+ R + ++ AL + + I+H D+KP N+++ + +R
Sbjct: 123 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 178
Query: 267 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFR 325
++++D+G + G+ + SR+++ PE+L+ + YD ++D+WSLGC+ M
Sbjct: 179 SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEM-HT 234
Query: 326 KEPFFYGHDNYDQLVKIAKVLG 347
EP F G + DQ+ KI +VLG
Sbjct: 235 GEPLFSGANEVDQMNKIVEVLG 256
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 191 AFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 83/142 (58%), Gaps = 11/142 (7%)
Query: 209 IFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHEQR 266
+++ + NT+F+ + L+ R + ++ AL + + I+H D+KP N+++ + +R
Sbjct: 142 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 197
Query: 267 K-LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFR 325
++++D+G + G+ + SR+++ PE+L+ + YD ++D+WSLGC+ M
Sbjct: 198 SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGM-PYDLAIDMWSLGCILVEM-HT 253
Query: 326 KEPFFYGHDNYDQLVKIAKVLG 347
EP F G + DQ+ KI +VLG
Sbjct: 254 GEPLFSGANEVDQMNKIVEVLG 275
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 83/142 (58%), Gaps = 11/142 (7%)
Query: 209 IFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQ--GIMHRDVKPHNVMIDHEQR 266
+++ + NT+F+ + L+ R + ++ AL + + I+H D+KP N+++ + +R
Sbjct: 142 LYDLLRNTNFRGVSLNLT----RKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR 197
Query: 267 -KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFR 325
++++D+G + G+ + SR+++ PE+L+ + YD ++D+WSLGC+ M
Sbjct: 198 XAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGM-PYDLAIDMWSLGCILVEM-HT 253
Query: 326 KEPFFYGHDNYDQLVKIAKVLG 347
EP F G + DQ+ KI +VLG
Sbjct: 254 GEPLFSGANEVDQMNKIVEVLG 275
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX----XXXXXXXXLQNLCGGP 189
D+YE+ +GRG Y V+ N+ + N
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 190 NIVKLLDIV--RDQQSKTPSLIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKALDYC 244
I++L D++ D I + ++D K L+ T L++ V+ +Y LL +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH-------------------PG--- 282
H GI+HRD+KP N +++ + +++ D+GLA + PG
Sbjct: 148 HESGIIHRDLKPANCLLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 283 ----KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
K+ V +R+++ PEL++ ++Y S+D+WS GC+FA ++
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 137 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 195
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 196 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 193
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 194 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIVKL +++ + KT LI E+ + D+ V + + + + R +++ A+ YCH
Sbjct: 71 PNIVKLFEVI--ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ I+HRD+K N+++D + +++ D+G + + G + + S + PEL +
Sbjct: 129 QKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 193 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 191 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 193 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 191 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 190
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 191 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 135 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 193
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 194 SFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 192
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 193 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 139 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 197
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 198 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 112 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 170
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 171 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH-------------PG 282
++L+AL Y HSQGI+HRD+KP N+ ID E R +++ D+GLA+ H PG
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 283 KEYNVR--VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
N+ + + + E+L Y+ +D++SLG +F MI+ PF G + + L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 341 KIAKV 345
K+ V
Sbjct: 240 KLRSV 244
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 109 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 167
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 168 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 111 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 169
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 170 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH-------------PG 282
++L+AL Y HSQGI+HRD+KP N+ ID E R +++ D+GLA+ H PG
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 283 KEYNVR--VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
N+ + + + E+L Y+ +D++SLG +F MI+ PF G + + L
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239
Query: 341 KIAKV 345
K+ V
Sbjct: 240 KLRSV 244
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 110 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 168
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 169 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 116 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 174
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 175 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 189
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 190 XFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 131 GEQDDYEVVRKVGRGKYSEVF------EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQN 184
G D Y+ V+K+G G Y EV G L+
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 185 LCGGPNIVKLLDIVRDQQSKTPSL-IFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDY 243
L PNI+KL + D+++ + ++ D +L S+ D + ++L Y
Sbjct: 61 L-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 119
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLV 301
H I+HRD+KP N++++ + R ++++D+GL+ + G + R+ + Y+ PE+L
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL- 178
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ YD D+WS G + ++ P F G + + L ++ K
Sbjct: 179 -RKKYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVEK 219
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIVKL +++ + KT L+ E+ + D+ V + + + + R +++ A+ YCH
Sbjct: 74 PNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ I+HRD+K N+++D + +++ D+G + + G + + S + PEL +
Sbjct: 132 QKYIVHRDLKAENLLLDGDM-NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKY 190
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE---YN 286
R+Y E++ AL+Y H +GI+HRD+KP N++++ E +++ D+G A+ P + N
Sbjct: 131 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-EDMHIQITDFGTAKVLSPESKQARAN 189
Query: 287 VRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHD 334
V + + PELL + + S DLW+LGC+ ++ PF G++
Sbjct: 190 SFVGTAQYVSPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIVKL +++ + KT LI E+ + D+ V + + + + R +++ A+ YCH
Sbjct: 74 PNIVKLFEVI--ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ I+HRD+K N+++D + +++ D+G + + G + + + + PEL +
Sbjct: 132 QKRIVHRDLKAENLLLDADM-NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 4 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ + LS +D YI
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYL 178
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 179 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX----XXLQNLCGGPN 190
+Y +++ +G+G +++V H + + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
IVKL +++ + KT L+ E+ + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX----XXLQNLCGGPN 190
+Y +++ +G+G +++V H + + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
IVKL +++ + KT L+ E+ + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIVKL +++ + KT L+ E+ + D+ V + + + + R +++ A+ YCH
Sbjct: 73 PNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ I+HRD+K N+++D + +++ D+G + + G + + S + PEL +
Sbjct: 131 QKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGG---P 189
D+Y+V ++G+G +S V VH T E +C P
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + Q+ L+F+ V + V S+ D + I ++L+++ YCHS
Sbjct: 89 NIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-D 205
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +D+W+ G + ++ PF+
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPPFW 231
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELL 238
L+ + G P+I+ L+D + S L+F+ + D+ LS+ + R + LL
Sbjct: 153 LRQVAGHPHIITLIDSY--ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ + H+ I+HRD+KP N+++D + ++RL D+G + PG++ + + PE
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLD-DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 299 LLVDLQD-----YDYSLDLWSLGCMFAGMIFRKEPFFY 331
+L D Y +DLW+ G + ++ PF++
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE--FYHPG 282
++ DV++Y+ EL LD+ HS GI++RD+KP N+++D E+ ++L D+GL++ H
Sbjct: 127 FTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKEAIDHEK 185
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
K Y+ Y PE +V+ Q + +S D WS G + M+ P F G D + + I
Sbjct: 186 KAYSFCGTVEYM-APE-VVNRQGHSHSADWWSYGVLMFEMLTGSLP-FQGKDRKETMTLI 242
Query: 343 AKV 345
K
Sbjct: 243 LKA 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX----XXLQNLCGGPN 190
+Y +++ +G+G +++V H + + + PN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
IVKL +++ + KT L+ E+ + D+ V + + + + R +++ A+ YCH +
Sbjct: 68 IVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+K N+++D + +++ D+G + + G + + S + PEL +
Sbjct: 126 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPF 206
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE--FYHPG 282
++ DV++Y+ EL ALD+ HS GI++RD+KP N+++D E+ ++L D+GL++ H
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEK 181
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
K Y+ Y PE +V+ + + S D WS G + M+ P F G D + + I
Sbjct: 182 KAYSFCGTVEYM-APE-VVNRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMI 238
Query: 343 AKV 345
K
Sbjct: 239 LKA 241
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX----XXLQNLCGGPN 190
+Y +++ +G+G +++V H + + + PN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
IVKL +++ + KT L+ E+ + D+ V + + + + R +++ A+ YCH +
Sbjct: 75 IVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD 307
I+HRD+K N+++D + +++ D+G + + G + + + + PEL +
Sbjct: 133 FIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 308 YSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE--FYHPG 282
++ DV++Y+ EL ALD+ HS GI++RD+KP N+++D E+ ++L D+GL++ H
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEK 181
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
K Y+ Y PE +V+ + + S D WS G + M+ P F G D + + I
Sbjct: 182 KAYSFCGTVEYM-APE-VVNRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMI 238
Query: 343 AKV 345
K
Sbjct: 239 LKA 241
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE--FYHPG 282
++ DV++Y+ EL ALD+ HS GI++RD+KP N+++D E+ ++L D+GL++ H
Sbjct: 124 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD-EEGHIKLTDFGLSKESIDHEK 182
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
K Y+ Y PE +V+ + + S D WS G + M+ P F G D + + I
Sbjct: 183 KAYSFCGTVEYM-APE-VVNRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMI 239
Query: 343 AKV 345
K
Sbjct: 240 LKA 242
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGG---P 189
D+Y+V ++G+G +S V VH T E +C P
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + Q+ L+F+ V + V S+ D + I ++L+++ YCHS
Sbjct: 65 NIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-KKD 181
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +D+W+ G + ++ PF+
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPPFW 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 4 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ + LS +D YI
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT 120
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLXGTLDYL 178
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 179 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGG---P 189
D+Y+V ++G+G +S V VH T E +C P
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + Q+ L+F+ V + V S+ D + I ++L+++ YCHS
Sbjct: 66 NIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-D 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +D+W+ G + ++ PF+
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGG---P 189
D+Y+V ++G+G +S V VH T E +C P
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + Q+ L+F+ V + V S+ D + I ++L+++ YCHS
Sbjct: 66 NIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 304
GI+HR++KP N+++ + + ++L D+GLA + + ++ + + PE+L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK-D 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +D+W+ G + ++ PF+
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 208 LIFEHVNNTDFKVLYP---TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 264
+ E+VN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 189
Query: 265 QRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 190 GH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 247
Query: 324 FRKEPF--FYGHDNYDQ 338
+ PF DN DQ
Sbjct: 248 AGRSPFDIVGSSDNPDQ 264
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIVKL +++ + KT L+ E+ + D+ V + + + + R +++ A+ YCH
Sbjct: 73 PNIVKLFEVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ I+HRD+K N+++D + +++ D+G + + G + + S + PEL +
Sbjct: 131 QKFIVHRDLKAENLLLDADM-NIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKY 189
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 19/221 (8%)
Query: 135 DYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNL-----CGGP 189
++ + +K+GRG++SEV+ D ++ + P
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 190 NIVKL-LDIVRDQQSKTPSLIFEHVNNTD-------FKVLYPTLSDYDVRYYIYELLKAL 241
N++K + D + +++ E + D FK + + V Y +L AL
Sbjct: 93 NVIKYYASFIEDNEL---NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVASRYFKGPELL 300
++ HS+ +MHRD+KP NV I ++L D GL F+ + V + Y+ PE +
Sbjct: 150 EHMHSRRVMHRDIKPANVFIT-ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVK 341
+ Y++ D+WSLGC+ M + PF+ N L K
Sbjct: 209 HE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK 248
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVK 193
D YEV +G G YS +H N L+ PNI+
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLR-YGQHPNIIT 80
Query: 194 LLDIVRDQQSKTPSLIFEHVNNTDF--KVLYPTL-SDYDVRYYIYELLKALDYCHSQGIM 250
L D+ D K ++ E + + K+L S+ + ++ + K ++Y H+QG++
Sbjct: 81 LKDVYDD--GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVV 138
Query: 251 HRDVKPHNVMIDHEQ---RKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 304
HRD+KP N++ E +R+ D+G A+ E + + Y F PE+L + Q
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVL-ERQ 195
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN 335
YD + D+WSLG + M+ PF G D+
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDD 226
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVK 193
D Y V +G G YSE VH N L+ PNI+
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR-YGQHPNIIT 85
Query: 194 LLDIVRDQQSKTPSLIFEHVNNTDF--KVLYPTL-SDYDVRYYIYELLKALDYCHSQGIM 250
L D+ D K L+ E + + K+L S+ + + ++ + K ++Y HSQG++
Sbjct: 86 LKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVV 143
Query: 251 HRDVKPHNVMIDHEQRK---LRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 304
HRD+KP N++ E LR+ D+G A+ E + + Y F PE+L Q
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVL-KRQ 200
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYG 332
YD D+WSLG + M+ PF G
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 208 LIFEHVNNTDFKVLYP---TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 264
+ E+VN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 157
Query: 265 QRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 158 GH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 215
Query: 324 FRKEPF--FYGHDNYDQ 338
+ PF DN DQ
Sbjct: 216 AGRSPFDIVGSSDNPDQ 232
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 189 PNIVKLLDIVRDQ-------QSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI+KL D+ D+ + +FE + N + D + ++L +
Sbjct: 106 PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR------HKFDECDAANIMKQILSGI 159
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y H I+HRD+KP N++++++ ++++D+GL+ F+ + R+ + Y+ PE+
Sbjct: 160 CYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV 219
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
L + Y+ D+WS G + ++ P F G ++ D + K+ K
Sbjct: 220 LK--KKYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKVEK 261
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 15/208 (7%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVK 193
D Y V +G G YSE VH N L+ PNI+
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR-YGQHPNIIT 85
Query: 194 LLDIVRDQQSKTPSLIFEHVNNTDF--KVLYPTL-SDYDVRYYIYELLKALDYCHSQGIM 250
L D+ D K L+ E + + K+L S+ + + ++ + K ++Y HSQG++
Sbjct: 86 LKDVYDD--GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVV 143
Query: 251 HRDVKPHNVMIDHEQRK---LRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 304
HRD+KP N++ E LR+ D+G A+ E + + Y F PE+L Q
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLR--AENGLLMTPCYTANFVAPEVL-KRQ 200
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYG 332
YD D+WSLG + M+ PF G
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTPFANG 228
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 4 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYL 178
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 179 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 25 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 83
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVN-NTDFKVLYPTLSDYD---VRYYI 234
+Q+ PNI++L D + LI E+ T ++ L LS +D YI
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYI 140
Query: 235 YELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYF 294
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDY 198
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 199 LPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 2 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYL 176
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 2 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYL 176
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 16 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 74
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVN-NTDFKVLYPTLSDYD---VRYYI 234
+Q+ PNI++L D + LI E+ T ++ L LS +D YI
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYI 131
Query: 235 YELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYF 294
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 132 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDY 189
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 190 LPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 16/224 (7%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D S LI E+ LS +D YI EL A
Sbjct: 63 SHLRHPNILRLYGYFHD--STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE-M 177
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYG--HDNYDQLVKI 342
++ + +D +DLWSLG + + K PF D Y ++ ++
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 208 LIFEHVNNTDFKVLYP---TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 264
+ E+VN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 142
Query: 265 QRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 143 GH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 200
Query: 324 FRKEPF--FYGHDNYDQ 338
+ PF DN DQ
Sbjct: 201 AGRSPFDIVGSSDNPDQ 217
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 208 LIFEHVNNTDFKVLYP---TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 264
+ E+VN D L + R+Y E+ AL+Y H +GI++RD+K NV++D E
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE 146
Query: 265 QRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
++L D+G+ E PG + + + PE+L +DY +S+D W+LG + M+
Sbjct: 147 GH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMM 204
Query: 324 FRKEPF--FYGHDNYDQ 338
+ PF DN DQ
Sbjct: 205 AGRSPFDIVGSSDNPDQ 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIVKL +++ + KT L+ E+ + D+ V + + + R +++ A+ YCH
Sbjct: 73 PNIVKLFEVI--ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ I+HRD+K N+++D + +++ D+G + + G + + + + PEL +
Sbjct: 131 QKFIVHRDLKAENLLLDADX-NIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WSLG + ++ PF
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNI+ L DI ++ LI E V+ DF +L++ + ++ ++L + Y H
Sbjct: 89 PNIITLHDIFENKTDVV--LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 146
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S+ I H D+KP N+M+ + +++LID+G+A G E+ + F PE +V+
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 205
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I+ V
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV 247
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 4 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 120
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYL 178
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE ++ + +D +DLWSLG + + K PF
Sbjct: 179 PPE-XIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNI+ L DI ++ LI E V+ DF +L++ + ++ ++L + Y H
Sbjct: 75 PNIITLHDIFENKTDVV--LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 132
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S+ I H D+KP N+M+ + +++LID+G+A G E+ + F PE +V+
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 191
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I+ V
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV 233
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNI+ L DI ++ LI E V+ DF +L++ + ++ ++L + Y H
Sbjct: 68 PNIITLHDIFENKTDVV--LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S+ I H D+KP N+M+ + +++LID+G+A G E+ + F PE +V+
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE-IVN 184
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I+ V
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFL-GETKQETLTNISAV 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 1 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 59
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYL 175
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 176 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 2 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + +
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYL 176
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 25 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 83
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVN-NTDFKVLYPTLSDYD---VRYYI 234
+Q+ PNI++L D + LI E+ T ++ L LS +D YI
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYI 140
Query: 235 YELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYF 294
EL AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + +
Sbjct: 141 TELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDY 198
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 199 LPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 5 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 64 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + + PE +
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPE-M 178
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVN-NTDFKVLYPTLSDYD---VRYYIYELLK 239
+ PNI++L D + LI E+ T ++ L LS +D YI EL
Sbjct: 63 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELAN 119
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
AL YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE- 176
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+++ + +D +DLWSLG + + K PF
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 8 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 66
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 67 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 124
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-M 181
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 207 SLIFEHVNNTDFK---VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 263
S I + +N D + S+ D+R+Y E++ L++ H++ +++RD+KP N+++D
Sbjct: 267 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD- 325
Query: 264 EQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
E +R+ D GLA + K + V + + PE+L YD S D +SLGCM ++
Sbjct: 326 EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
Query: 324 FRKEPF 329
PF
Sbjct: 385 RGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 207 SLIFEHVNNTDFK---VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 263
S I + +N D + S+ D+R+Y E++ L++ H++ +++RD+KP N+++D
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD- 326
Query: 264 EQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
E +R+ D GLA + K + V + + PE+L YD S D +SLGCM ++
Sbjct: 327 EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 324 FRKEPF 329
PF
Sbjct: 386 RGHSPF 391
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 3 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 61
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 62 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 119
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-M 176
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PNI+ L D+ ++ LI E V+ DF +LS+ + +I ++L ++Y H
Sbjct: 75 PNIITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 246 SQGIMHRDVKPHNVMIDHEQ---RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
++ I H D+KP N+M+ + ++LID+GLA G E+ + F PE +V+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVN 191
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I V
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV 233
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 207 SLIFEHVNNTDFK---VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 263
S I + +N D + S+ D+R+Y E++ L++ H++ +++RD+KP N+++D
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD- 326
Query: 264 EQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
E +R+ D GLA + K + V + + PE+L YD S D +SLGCM ++
Sbjct: 327 EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 324 FRKEPF 329
PF
Sbjct: 386 RGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 207 SLIFEHVNNTDFK---VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 263
S I + +N D + S+ D+R+Y E++ L++ H++ +++RD+KP N+++D
Sbjct: 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD- 326
Query: 264 EQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
E +R+ D GLA + K + V + + PE+L YD S D +SLGCM ++
Sbjct: 327 EHGHVRISDLGLACDFSKKKPH-ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 324 FRKEPF 329
PF
Sbjct: 386 RGHSPF 391
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 2 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 118
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ ++G + + P + +
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYL 176
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 7 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 66 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE-M 180
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH-------------PG 282
++L+AL Y HSQGI+HR++KP N+ ID E R +++ D+GLA+ H PG
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 283 KEYNVR--VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
N+ + + + E+L Y+ +D +SLG +F I+ PF G + + L
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILK 239
Query: 341 KIAKV 345
K+ V
Sbjct: 240 KLRSV 244
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 124 ESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXX 178
ES QW +D+E+ R +G+GK+ V+ +
Sbjct: 1 ESKKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 59
Query: 179 XXXLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIY 235
+Q+ PNI++L D + LI E+ LS +D YI
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 117
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
EL AL YCHS+ ++HRD+KP N+++ +L++ ++G + + P + +
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLG-SAGELKIANFGWS-VHAPSSRRTTLCGTLDYL 175
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE +++ + +D +DLWSLG + + K PF
Sbjct: 176 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELLKALD 242
G P +++LLD Q+ L+ E D+ L + R + +++ A+
Sbjct: 96 GHPGVIRLLDWFETQEGFM--LVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ 153
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
+CHS+G++HRD+K N++ID + +LID+G H + Y +R + PE +
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPEWISR 212
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPF 329
Q + +WSLG + M+ PF
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 63 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPE-M 177
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 63 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPE-M 177
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 220 VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEF 278
V + +++ + +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 239 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 297
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQ 338
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F +
Sbjct: 298 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 351
Query: 339 LVKIAKVLGTDELNAYLNKYHIELDPHLAALVGRLVI 375
+K K++ D L L H ++ P L + RL++
Sbjct: 352 PLKAMKMI-RDNLPPRLKNLH-KVSPSLKGFLDRLLV 386
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 1 QWA-LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQ 59
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 60 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 117
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-M 174
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVK 193
D YEV +G G YS +H N L+ PNI+
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLR-YGQHPNIIT 80
Query: 194 LLDIVRDQQSKTPSLIFEHVNNTDF--KVLYPTL-SDYDVRYYIYELLKALDYCHSQGIM 250
L D+ D K ++ E + K+L S+ + ++ + K ++Y H+QG++
Sbjct: 81 LKDVYDD--GKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVV 138
Query: 251 HRDVKPHNVMIDHEQ---RKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDY 306
HRD+KP N++ E +R+ D+G A + + F PE+L + Q Y
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL-ERQGY 197
Query: 307 DYSLDLWSLGCMFAGMIFRKEPFFYGHDN 335
D + D+WSLG + + PF G D+
Sbjct: 198 DAACDIWSLGVLLYTXLTGYTPFANGPDD 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 208 LIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK 267
L FE V D +Y S+ +Y+ ++L+AL YCH I+HRDVKP NV++ ++
Sbjct: 113 LCFEIVKRADAGFVY---SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENS 169
Query: 268 --LRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF 324
++L D+G+A + G RV + +F PE +V + Y +D+W G + ++
Sbjct: 170 APVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLS 228
Query: 325 RKEPFF 330
PF+
Sbjct: 229 GCLPFY 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 189 PNIVKLLDIVRDQQSKTPS---LIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALD 242
P+I+KL ++ TP+ ++ E+V+ D+ + + + + R ++L A+D
Sbjct: 71 PHIIKLYQVI-----STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
YCH ++HRD+KP NV++D ++ D+GL+ G+ S + PE++
Sbjct: 126 YCHRHMVVHRDLKPENVLLD-AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + ++ PF
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 5 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 64 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPE-M 178
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 63 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPE-M 177
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 63 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPE-M 177
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVA 290
+Y+ E+ AL + H +GI++RD+KP N+M++H Q ++L D+GL E H G +
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNH-QGHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 291 SRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ + PE+L+ ++ ++D WSLG + M+ P F G + + KI K
Sbjct: 184 TIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPP-FTGENRKKTIDKILK 235
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 7 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 66 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + + PE +
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPE-M 180
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFE-HVNNTD---FKVLYPTLSDYDVRYYIYELLKALDYCH 245
NI+K+LDI +Q L+ E H + D F +P L + Y +L+ A+ Y
Sbjct: 90 NIIKVLDIFENQGFF--QLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR 147
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ I+HRD+K N++I E ++LID+G A + GK + + + PE+L+
Sbjct: 148 LKDIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
L++WSLG ++F + PF
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 63 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-M 177
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 9 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 68 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-M 182
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 5 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 64 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-M 178
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 189 PNIVKLLDIVRDQQSKTPS---LIFEHVNNT--DFKVLYPTLSDYDVRYYIYELLKALDY 243
P+I+KL D++ TP+ ++ E+ D+ V +++ + R + +++ A++Y
Sbjct: 69 PHIIKLYDVI-----TTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEY 123
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
CH I+HRD+KP N+++D + +++ D+GL+ G S + PE++
Sbjct: 124 CHRHKIVHRDLKPENLLLD-DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + M+ + PF
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 220 VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEF 278
V + +++ + +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 162 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 220
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQ 338
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F +
Sbjct: 221 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 274
Query: 339 LVKIAKVLGTDELNAYLNKYHIELDPHLAALVGRLVI 375
+K K++ D L L H ++ P L + RL++
Sbjct: 275 PLKAMKMI-RDNLPPRLKNLH-KVSPSLKGFLDRLLV 309
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----------DH--------EQRKLRLI 271
VR+ Y+L AL + H + H D+KP N++ +H + +R+
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 272 DWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFY 331
D+G A F H + + VA+R+++ PE++++L + D+WS+GC+ +R F
Sbjct: 185 DFGSATFDH--EHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEY-YRGFTLFQ 240
Query: 332 GHDNYDQLVKIAKVLG 347
H+N + LV + K+LG
Sbjct: 241 THENREHLVMMEKILG 256
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----------DH--------EQRKLRLI 271
VR+ Y+L AL + H + H D+KP N++ +H + +R+
Sbjct: 157 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 272 DWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFY 331
D+G A F H + + VA+R+++ PE++++L + D+WS+GC+ +R F
Sbjct: 217 DFGSATFDH--EHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFE-YYRGFTLFQ 272
Query: 332 GHDNYDQLVKIAKVLG 347
H+N + LV + K+LG
Sbjct: 273 THENREHLVMMEKILG 288
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+E+ R +G+GK+ V+ + +Q
Sbjct: 4 QWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 63 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLG-SAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPE-M 177
Query: 301 VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + +D +DLWSLG + + K PF
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVA 290
+Y+ E+ AL + H +GI++RD+KP N+M++H Q ++L D+GL E H G +
Sbjct: 125 FYLAEISMALGHLHQKGIIYRDLKPENIMLNH-QGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 291 SRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ + PE+L+ ++ ++D WSLG + M+ P F G + + KI K
Sbjct: 184 TIEYMAPEILMR-SGHNRAVDWWSLGALMYDMLTGAPP-FTGENRKKTIDKILK 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMI----------DH--------EQRKLRLI 271
VR+ Y+L AL + H + H D+KP N++ +H + +R+
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 272 DWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFY 331
D+G A F H + + VA+R+++ PE++++L + D+WS+GC+ +R F
Sbjct: 194 DFGSATFDH--EHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEY-YRGFTLFQ 249
Query: 332 GHDNYDQLVKIAKVLG 347
H+N + LV + K+LG
Sbjct: 250 THENREHLVMMEKILG 265
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 220 VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEF 278
V + +++ + +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 119 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 177
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQ 338
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F +
Sbjct: 178 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 231
Query: 339 LVKIAKVLGTDELNAYLNKYHIELDPHLAALVGRLVI 375
+K K++ D L L H ++ P L + RL++
Sbjct: 232 PLKAMKMI-RDNLPPRLKNLH-KVSPSLKGFLDRLLV 266
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 220 VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEF 278
V + +++ + +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 117 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 175
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQ 338
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F +
Sbjct: 176 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 229
Query: 339 LVKIAKVLGTDELNAYLNKYHIELDPHLAALVGRLVI 375
+K K++ D L L H ++ P L + RL++
Sbjct: 230 PLKAMKMI-RDNLPPRLKNLH-KVSPSLKGFLDRLLV 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 189 PNIVKLLDIVRDQQSKTPS---LIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALD 242
P+I+KL ++ TP+ ++ E+V+ D+ + + + + R ++L A+D
Sbjct: 71 PHIIKLYQVI-----STPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
YCH ++HRD+KP NV++D ++ D+GL+ G+ S + PE++
Sbjct: 126 YCHRHMVVHRDLKPENVLLD-AHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG 184
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + ++ PF
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQSKTPSL-------IFEHVNNTDFKVLYPTLSDYDVRYYI 234
+ N P ++ L D D+ L +F+ + D+K +S+ +V Y+
Sbjct: 101 IMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-----MSEAEVINYM 155
Query: 235 YELLKALDYCHSQGIMHRDVKPHNVMIDHEQ-RKLRLIDWGLAEFYHPGKEYNVRVASRY 293
+ + L + H I+H D+KP N+M + ++ +++ID+GLA +P + V A+
Sbjct: 156 RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAE 215
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
F PE +VD + + D+W++G + ++ P F G D+ + L + +
Sbjct: 216 FAAPE-IVDREPVGFYTDMWAIGVLGYVLLSGLSP-FAGEDDLETLQNVKR 264
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 220 VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEF 278
V + +++ + +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 112 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 170
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQ 338
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F +
Sbjct: 171 SKEVPRRKXLVGTPYWMAPELISRL-PYGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 224
Query: 339 LVKIAKVLGTDELNAYLNKYHIELDPHLAALVGRLVI 375
+K K++ D L L H ++ P L + RL++
Sbjct: 225 PLKAMKMI-RDNLPPRLKNLH-KVSPSLKGFLDRLLV 259
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 220 VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEF 278
V + +++ + +L+AL H+QG++HRD+K ++++ H+ R ++L D+G A+
Sbjct: 108 VTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR-VKLSDFGFCAQV 166
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQ 338
V + Y+ PEL+ L Y +D+WSLG M M+ + P+F +
Sbjct: 167 SKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYF-----NEP 220
Query: 339 LVKIAKVLGTDELNAYLNKYHIELDPHLAALVGRLVI 375
+K K++ D L L H ++ P L + RL++
Sbjct: 221 PLKAMKMI-RDNLPPRLKNLH-KVSPSLKGFLDRLLV 255
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 217 DFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA 276
D+ + LS+ + R +++ A+ Y HSQG HRD+KP N++ D E KL+LID+GL
Sbjct: 97 DYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYHKLKLIDFGLC 155
Query: 277 EFYHPGKEYNVRV--ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
K+Y+++ S + PEL+ D+WS+G + ++ PF
Sbjct: 156 AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 208 LIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK 267
L FE V D +Y S+ +Y+ ++L+AL YCH I+HRDVKPH V++ ++
Sbjct: 115 LCFEIVKRADAGFVY---SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 171
Query: 268 --LRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF 324
++L +G+A + G RV + +F PE +V + Y +D+W G + ++
Sbjct: 172 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLS 230
Query: 325 RKEPFF 330
PF+
Sbjct: 231 GCLPFY 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVAS 291
+Y E+ L+ H + I++RD+KP N+++D + +R+ D GLA G+ RV +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 292 RYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ PE++ + + Y +S D W+LGC+ MI + PF
Sbjct: 349 VGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVAS 291
+Y E+ L+ H + I++RD+KP N+++D + +R+ D GLA G+ RV +
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLD-DHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 292 RYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ PE++ + + Y +S D W+LGC+ MI + PF
Sbjct: 349 VGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV L DI Q + +F+ + F ++ D I+++L A+
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAV 129
Query: 242 DYCHSQGIMHRDVKPHNVM---IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
Y H GI+HRD+KP N++ +D E K+ + D+GL++ PG + + + PE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVK 341
+L + Y ++D WS+G + ++ PF+ +D ++Q++K
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 25/216 (11%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX-----XXLQNLC 186
+ +DYEVV+ +GRG + EV H + + +
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKAL 241
P +V+L +D + ++ E++ D L +S+YDV R+Y E++ AL
Sbjct: 132 NSPWVVQLFYAFQDD--RYLYMVMEYMPGGD---LVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR----VASRYFKGP 297
D HS G +HRDVKP N+++D L+L D+G KE VR V + + P
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTC--MKMNKEGMVRCDTAVGTPDYISP 243
Query: 298 ELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFF 330
E+L Y D WS+G M+ PF+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 25/216 (11%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX-----XXLQNLC 186
+ +DYEVV+ +GRG + EV H + + +
Sbjct: 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 126
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKAL 241
P +V+L +D + ++ E++ D L +S+YDV R+Y E++ AL
Sbjct: 127 NSPWVVQLFYAFQDD--RYLYMVMEYMPGGD---LVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR----VASRYFKGP 297
D HS G +HRDVKP N+++D L+L D+G KE VR V + + P
Sbjct: 182 DAIHSMGFIHRDVKPDNMLLDKSGH-LKLADFGTC--MKMNKEGMVRCDTAVGTPDYISP 238
Query: 298 ELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFF 330
E+L Y D WS+G M+ PF+
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX-----XXLQNLC 186
+ +DYEVV+ +GRG + EV H + + +
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKAL 241
P +V+L +D + ++ E++ D L +S+YDV R+Y E++ AL
Sbjct: 132 NSPWVVQLFYAFQDD--RYLYMVMEYMPGGD---LVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR----VASRYFKGP 297
D HS G +HRDVKP N+++D + L+L D+G KE VR V + + P
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLD-KSGHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISP 243
Query: 298 ELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFF 330
E+L Y D WS+G M+ PF+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 279
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 208 LIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK 267
L FE V D +Y S+ +Y+ ++L+AL YCH I+HRDVKPH V++ ++
Sbjct: 113 LCFEIVKRADAGFVY---SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169
Query: 268 --LRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF 324
++L +G+A + G RV + +F PE +V + Y +D+W G + ++
Sbjct: 170 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLS 228
Query: 325 RKEPFF 330
PF+
Sbjct: 229 GCLPFY 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E + DF L + R + +++L
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFV--LILERMEPVQDLFDFITERGALQEELARSFFWQVL 124
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 183
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV L DI Q + +F+ + F ++ D I+++L A+
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAV 129
Query: 242 DYCHSQGIMHRDVKPHNVM---IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
Y H GI+HRD+KP N++ +D E K+ + D+GL++ PG + + + PE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVK 341
+L + Y ++D WS+G + ++ PF+ +D ++Q++K
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV L DI Q + +F+ + F ++ D I+++L A+
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAV 129
Query: 242 DYCHSQGIMHRDVKPHNVM---IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
Y H GI+HRD+KP N++ +D E K+ + D+GL++ PG + + + PE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVK 341
+L + Y ++D WS+G + ++ PF+ +D ++Q++K
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV L DI Q + +F+ + F ++ D I+++L A+
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAV 129
Query: 242 DYCHSQGIMHRDVKPHNVM---IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
Y H GI+HRD+KP N++ +D E K+ + D+GL++ PG + + + PE
Sbjct: 130 KYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVK 341
+L + Y ++D WS+G + ++ PF+ +D ++Q++K
Sbjct: 189 VLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK 232
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 207 SLIFEHVNNTDFKVLYPTLSDYDVRYYIY-------------------ELLKALDYCHSQ 247
SL + TD ++ ++ D+RY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 306
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 307 DYSLDLWSLGCMFAGMIFRKEPF 329
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 207 SLIFEHVNNTDFKVLYPTLSDYDVRYYIY-------------------ELLKALDYCHSQ 247
SL + TD ++ ++ D+RY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 306
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 307 DYSLDLWSLGCMFAGMIFRKEPF 329
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 207 SLIFEHVNNTDFKVLYPTLSDYDVRYYIY-------------------ELLKALDYCHSQ 247
SL + TD ++ ++ D+RY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 306
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 307 DYSLDLWSLGCMFAGMIFRKEPF 329
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 32/167 (19%)
Query: 208 LIFEHVNNTDFKVL----YPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH 263
LIFE + + ++++ Y D++ Y E+LKAL+Y + H D+KP N+++D
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Query: 264 ------------------------EQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
+ ++LID+G A F + + +R ++ PE+
Sbjct: 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF--KSDYHGSIINTRQYRAPEV 230
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVL 346
+++L +D S D+WS GC+ A + + F H++ + L + ++
Sbjct: 231 ILNL-GWDVSSDMWSFGCVLAEL-YTGSLLFRTHEHMEHLAMMESII 275
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 207 SLIFEHVNNTDFKVLYPTLSDYDVRYYIY-------------------ELLKALDYCHSQ 247
SL + TD ++ ++ D+RY+IY +++ L++ H +
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPELLVDLQDY 306
I++RD+KP NV++D + +R+ D GLA G+ A + F PELL+ ++Y
Sbjct: 309 NIIYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEY 366
Query: 307 DYSLDLWSLGCMFAGMIFRKEPF 329
D+S+D ++LG MI + PF
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHS 246
N++ L D+ ++ LI E V+ DF +LS+ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 247 QGIMHRDVKPHNVMIDHEQ---RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
+ I H D+KP N+M+ + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I V
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV 233
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHS 246
N++ L D+ ++ LI E V+ DF +LS+ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 247 QGIMHRDVKPHNVMIDHEQ---RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
+ I H D+KP N+M+ + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I V
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV 233
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHS 246
N++ L D+ ++ LI E V+ DF +LS+ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 247 QGIMHRDVKPHNVMIDHEQ---RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
+ I H D+KP N+M+ + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I V
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV 233
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 55 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 114
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 115 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 172
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 173 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 231
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 23/229 (10%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVF-----EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+++ R +G+GK+ V+ + + +Q
Sbjct: 8 QW-TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 67 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + + PE +
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPE-M 181
Query: 301 VDLQDYDYSLDLWSLGCM----FAGMIFRKEPFFYGHDNYDQLVKIAKV 345
++ + +D +DLWSLG + GM P F H + +I++V
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGM-----PPFEAHTYQETYRRISRV 225
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 140
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 141 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 199
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 15/154 (9%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT-------LSDYDVRYYIYELLKAL 241
PNIV+ D + D+ + T ++ E+ D + L + V + +L AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 242 DYCHSQG-----IMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR-VASRYFK 295
CH + ++HRD+KP NV +D +Q ++L D+GLA + +++ V + Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE + + Y+ D+WSLGC+ + PF
Sbjct: 184 SPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIF---EHVNNT---DFKVLYPTLSDYDVRYYIYELLKALD 242
P+I+KL ++ TPS IF E+V+ D+ L + + R ++L +D
Sbjct: 76 PHIIKLYQVI-----STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
YCH ++HRD+KP NV++D ++ D+GL+ G+ S + PE++
Sbjct: 131 YCHRHMVVHRDLKPENVLLD-AHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISG 189
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+D+WS G + ++ PF
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD ++ + LI E DF L + R + +++L
Sbjct: 63 KVSSGFSGVIRLLDWF--ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 121 EAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 179
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 82 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 139
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 140 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 198
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 167
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 168 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 226
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 140
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 141 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 199
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 35 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 211
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 22 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 81
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 82 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 139
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 140 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 198
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 36 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 212
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHS 246
N++ L D+ ++ LI E V+ DF +LS+ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 247 QGIMHRDVKPHNVMIDHEQ---RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
+ I H D+KP N+M+ + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I V
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITSV 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 129 QWGEQDDYEVVRKVGRGKYSEVF-----EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQ 183
QW +D+++ R +G+GK+ V+ + + +Q
Sbjct: 8 QW-TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKA 240
+ PNI++L D + LI E+ LS +D YI EL A
Sbjct: 67 SHLRHPNILRLYGYFHD--ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
L YCHS+ ++HRD+KP N+++ +L++ D+G + + P + + PE +
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLG-SNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPE-M 181
Query: 301 VDLQDYDYSLDLWSLGCM----FAGMIFRKEPFFYGHDNYDQLVKIAKV 345
++ + +D +DLWSLG + GM P F H + +I++V
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGM-----PPFEAHTYQETYRRISRV 225
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 50 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 167
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 168 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 226
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 101
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 102 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 159
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 160 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 218
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 23 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 82
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 83 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 140
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 141 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 199
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHS 246
N++ L D+ ++ LI E V+ DF +LS+ + +I ++L ++Y H+
Sbjct: 76 NVITLHDVYENRTDVV--LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 247 QGIMHRDVKPHNVMIDHEQ---RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
+ I H D+KP N+M+ + ++LID+GLA G E+ + F PE +V+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE-IVNY 192
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L I V
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANITAV 233
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 184
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 184
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT-------LSDYDVRYYIYELLKAL 241
PNIV+ D + D+ + T ++ E+ D + L + V + +L AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 242 DYCHSQG-----IMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-HPGKEYNVRVASRYFK 295
CH + ++HRD+KP NV +D +Q ++L D+GLA H V + Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE + + Y+ D+WSLGC+ + PF
Sbjct: 184 SPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD ++ + LI E DF L + R + +++L
Sbjct: 63 KVSSGFSGVIRLLDWF--ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 179
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 7 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 66
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 124
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 183
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 8 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 184
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT-------LSDYDVRYYIYELLKAL 241
PNIV+ D + D+ + T ++ E+ D + L + V + +L AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 242 DYCHSQG-----IMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-HPGKEYNVRVASRYFK 295
CH + ++HRD+KP NV +D +Q ++L D+GLA H V + Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQ-NVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE + + Y+ D+WSLGC+ + PF
Sbjct: 184 SPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 30 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 89
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD S LI E DF L + R + +++L
Sbjct: 90 KVSSGFSGVIRLLDWFERPDSFV--LILERPEPVQDLFDFITERGALQEELARSFFWQVL 147
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 148 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 206
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 30/142 (21%)
Query: 228 YDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMI---DHE---------------QRKLR 269
+ VR+ ++L +A+ + H + H D+KP N++ D+E +R
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVR 196
Query: 270 LIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCM----FAGMIFR 325
++D+G A F H + ++ V++R+++ PE++++L + D+WS+GC+ + G
Sbjct: 197 VVDFGSATFDH--EHHSTIVSTRHYRAPEVILEL-GWSQPCDVWSIGCIIFEYYVGFT-- 251
Query: 326 KEPFFYGHDNYDQLVKIAKVLG 347
F HDN + L + ++LG
Sbjct: 252 ---LFQTHDNREHLAMMERILG 270
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD ++ + LI E DF L + R + +++L
Sbjct: 63 KVSSGFSGVIRLLDWF--ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 179
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 17/211 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDN---------EXXXXXXXXXXXXXXXXXXXXXLQ 183
+ Y+V +G G + V+ G+ +DN + L+
Sbjct: 6 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 65
Query: 184 NLCGG-PNIVKLLDIVRDQQSKTPSLIFEHVNNT----DFKVLYPTLSDYDVRYYIYELL 238
+ G +++LLD ++ + LI E DF L + R + +++L
Sbjct: 66 KVSSGFSGVIRLLDWF--ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 123
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+A+ +CH+ G++HRD+K N++ID + +L+LID+G Y +R + PE
Sbjct: 124 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPE 182
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + S +WSLG + M+ PF
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 139 VRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQ------NLCGGPNIV 192
+ K+G+G + EVF+G+ DN +Q + C P +
Sbjct: 32 LEKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 193 KLL-DIVRDQQSKTPSLIFEHVNN-TDFKVLYP-TLSDYDVRYYIYELLKALDYCHSQGI 249
K ++D + +I E++ + +L P L + + + E+LK LDY HS+
Sbjct: 89 KYYGSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 250 MHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY 308
+HRD+K NV++ E +++L D+G+A + + N V + ++ PE ++ YD
Sbjct: 146 IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDS 203
Query: 309 SLDLWSLGCMFAGMIFRKEP 328
D+WSLG + A + R EP
Sbjct: 204 KADIWSLG-ITAIELARGEP 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 139 VRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQ------NLCGGPNIV 192
+ K+G+G + EVF+G+ DN +Q + C P +
Sbjct: 12 LEKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 193 KLL-DIVRDQQSKTPSLIFEHVNN-TDFKVLYP-TLSDYDVRYYIYELLKALDYCHSQGI 249
K ++D + +I E++ + +L P L + + + E+LK LDY HS+
Sbjct: 69 KYYGSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 250 MHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY 308
+HRD+K NV++ E +++L D+G+A + + N V + ++ PE ++ YD
Sbjct: 126 IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDS 183
Query: 309 SLDLWSLGCMFAGMIFRKEP 328
D+WSLG + A + R EP
Sbjct: 184 KADIWSLG-ITAIELARGEP 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTD----FKVLYPTLSDYDVRYYIYELLKALDYC 244
P+I++L + D S L+ E +N + K S+ + R+++++++ + Y
Sbjct: 71 PSILELYNYFED--SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDL 303
HS GI+HRD+ N+++ +++ D+GLA + P +++ + + PE+
Sbjct: 129 HSHGILHRDLTLSNLLLT-RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR- 186
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ D+WSLGCMF ++ + PF
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 220 VLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEF 278
V + +++ + +L+AL Y H+QG++HRD+K ++++ + R ++L D+G A+
Sbjct: 133 VTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR-IKLSDFGFCAQV 191
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ V + Y+ PE++ L Y +D+WSLG M MI + P+F
Sbjct: 192 SKEVPKRKXLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMIDGEPPYF 242
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 94/229 (41%), Gaps = 35/229 (15%)
Query: 122 DYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXX 181
D +SLT Q ++ ++V+ K+G G Y V++ +H +
Sbjct: 19 DEDSLTKQ--PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEIS 76
Query: 182 LQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP----------------TL 225
+ C P++VK + NTD ++ TL
Sbjct: 77 IMQQCDSPHVVKYYG--------------SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL 122
Query: 226 SDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKE 284
++ ++ + LK L+Y H +HRD+K N++++ E +L D+G+A + +
Sbjct: 123 TEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHA-KLADFGVAGQLTDXMAK 181
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
N + + ++ PE++ ++ Y+ D+WSLG M K P+ H
Sbjct: 182 RNXVIGTPFWMAPEVIQEI-GYNCVADIWSLGITAIEMAEGKPPYADIH 229
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 21/214 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXX-----XXLQNLC 186
+ +DY+VV+ +GRG + EV H + +
Sbjct: 73 KAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDV-----RYYIYELLKAL 241
P +V+L +D K ++ E++ D L +S+YDV ++Y E++ AL
Sbjct: 133 NSPWVVQLFCAFQDD--KYLYMVMEYMPGGD---LVNLMSNYDVPEKWAKFYTAEVVLAL 187
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEY-NVRVASRYFKGPEL 299
D HS G++HRDVKP N+++D + L+L D+G + G + + V + + PE+
Sbjct: 188 DAIHSMGLIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
Query: 300 LVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFF 330
L Y D WS+G M+ PF+
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY 280
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPS---LIFEHVNNTDFKVLYPTL------SDYDVRYYIYELLK 239
PNIV+ +++ TP+ +I E+ + + LY + S+ + R++ +LL
Sbjct: 76 PNIVRFKEVIL-----TPTHLAIIMEYASGGE---LYERICNAGRFSEDEARFFFQQLLS 127
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+ YCHS I HRD+K N ++D +L++ D+G ++ + V + + PE
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPE 187
Query: 299 LLVDLQDYDYSL-DLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNK 357
+L+ Q+YD + D+WS G M+ PF + D I ++L Y
Sbjct: 188 VLLR-QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV----KYSIP 242
Query: 358 YHIELDPHLAALVGRLVI 375
I + P L+ R+ +
Sbjct: 243 DDIRISPECCHLISRIFV 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELL 238
L+ + G PNI++L D + + L+F+ + D+ TLS+ + R + LL
Sbjct: 77 LRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+ + H I+HRD+KP N+++D + ++L D+G + PG++ + + PE
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 299 LL-VDLQD----YDYSLDLWSLGCMFAGMIFRKEPFFY 331
++ + D Y +D+WS G + ++ PF++
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 139 VRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQ------NLCGGPNIV 192
+ K+G+G + EVF+G+ DN +Q + C P +
Sbjct: 12 LEKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 193 KLL-DIVRDQQSKTPSLIFEHVNN-TDFKVLYP-TLSDYDVRYYIYELLKALDYCHSQGI 249
K ++D + +I E++ + +L P L + + + E+LK LDY HS+
Sbjct: 69 KYYGSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 250 MHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY 308
+HRD+K NV++ E +++L D+G+A + + N V + ++ PE ++ YD
Sbjct: 126 IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDS 183
Query: 309 SLDLWSLGCMFAGMIFRKEP 328
D+WSLG + A + R EP
Sbjct: 184 KADIWSLG-ITAIELARGEP 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 139 VRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQ------NLCGGPNIV 192
+ K+G+G + EVF+G+ DN +Q + C P +
Sbjct: 27 LEKIGKGSFGEVFKGI---DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 193 KLL-DIVRDQQSKTPSLIFEHVNN-TDFKVLYP-TLSDYDVRYYIYELLKALDYCHSQGI 249
K ++D + +I E++ + +L P L + + + E+LK LDY HS+
Sbjct: 84 KYYGSYLKDTKL---WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 250 MHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDY 308
+HRD+K NV++ E +++L D+G+A + + N V + ++ PE ++ YD
Sbjct: 141 IHRDIKAANVLLS-EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDS 198
Query: 309 SLDLWSLGCMFAGMIFRKEP 328
D+WSLG + A + R EP
Sbjct: 199 KADIWSLG-ITAIELARGEP 217
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Query: 217 DFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA 276
DF L + R + +++L+A+ +CH+ G++HRD+K N++ID + +L+LID+G
Sbjct: 146 DFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 205
Query: 277 EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
Y +R + PE + + + S +WSLG + M+ PF
Sbjct: 206 ALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
L + ++ + L+ L Y HS ++HRDVK N+++ E ++L D+G A P
Sbjct: 151 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA-- 207
Query: 285 YNVRVASRYFKGPELLVDLQD--YDYSLDLWSLGCMFAGMIFRKEPFF 330
N V + Y+ PE+++ + + YD +D+WSLG + RK P F
Sbjct: 208 -NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELL 238
L+ + G PNI++L D + + L+F+ + D+ TLS+ + R + LL
Sbjct: 77 LRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+ + H I+HRD+KP N+++D + ++L D+G + PG++ + + PE
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 299 LL-VDLQD----YDYSLDLWSLGCMFAGMIFRKEPFFY 331
++ + D Y +D+WS G + ++ PF++
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 19/251 (7%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R+ + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYHIELDP 364
+ +D+WS G + M+ + P+ D+ + E YLN + ++D
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK------EKKTYLNPWK-KIDS 235
Query: 365 HLAALVGRLVI 375
AL+ ++++
Sbjct: 236 APLALLHKILV 246
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEY 285
++ + + E+LK LDY HS+ +HRD+K NV++ EQ ++L D+G+A + +
Sbjct: 119 EFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKR 177
Query: 286 NVRVASRYFKGPELLVDLQDYDYSLDLWSLGC 317
N V + ++ PE ++ YD D+WSLG
Sbjct: 178 NTFVGTPFWMAPE-VIQQSAYDSKADIWSLGI 208
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 20/150 (13%)
Query: 195 LDIVRDQQSKTPSLIFEHVNNT--------DFKVLYPTLSDYDVRYYIYELLKALDYCHS 246
+D+V+ Q P E +N + DF +S+ + ++ AL Y H+
Sbjct: 132 MDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI-----MRQIFSALHYLHN 186
Query: 247 QGIMHRDVKPHNVMIDHEQR-KLRLIDWGLA-EFY--HPGKEYNV--RVASRYFKGPELL 300
QGI HRD+KP N + + +++L+D+GL+ EFY + G+ Y + + + YF PE+L
Sbjct: 187 QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246
Query: 301 -VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ Y D WS G + ++ PF
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 19/251 (7%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R+ + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRREGNIQY--LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNKYHIELDP 364
+ +D+WS G + M+ + P+ D+ + E YLN + ++D
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK------EKKTYLNPWK-KIDS 236
Query: 365 HLAALVGRLVI 375
AL+ ++++
Sbjct: 237 APLALLHKILV 247
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELL 238
L+ + G PNI++L D + + L+F+ + D+ TLS+ + R + LL
Sbjct: 64 LRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPE 298
+ + H I+HRD+KP N+++D + ++L D+G + PG++ + + PE
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDM-NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 299 LL-VDLQD----YDYSLDLWSLGCMFAGMIFRKEPFFY 331
++ + D Y +D+WS G + ++ PF++
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 218
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
L + ++ + L+ L Y HS ++HRDVK N+++ E ++L D+G A P
Sbjct: 112 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-EPGLVKLGDFGSASIMAPA-- 168
Query: 285 YNVRVASRYFKGPELLVDLQD--YDYSLDLWSLGCMFAGMIFRKEPFF 330
N V + Y+ PE+++ + + YD +D+WSLG + RK P F
Sbjct: 169 -NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 65 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 123 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPG 282
L + + Y Y++L A+ Y H GI+HRD+KP NV++ ++ +++ D+G ++
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 283 KEYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMF 319
+ + PE+LV + Y+ ++D WSLG +
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPG 282
L + + Y Y++L A+ Y H GI+HRD+KP NV++ ++ +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 283 KEYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMF 319
+ + PE+LV + Y+ ++D WSLG +
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPG 282
L + + Y Y++L A+ Y H GI+HRD+KP NV++ ++ +++ D+G ++
Sbjct: 110 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 283 KEYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMF 319
+ + PE+LV + Y+ ++D WSLG +
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPG 282
L + + Y Y++L A+ Y H GI+HRD+KP NV++ ++ +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 283 KEYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMF 319
+ + PE+LV + Y+ ++D WSLG +
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPG 282
L + + Y Y++L A+ Y H GI+HRD+KP NV++ ++ +++ D+G ++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 283 KEYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMF 319
+ + PE+LV + Y+ ++D WSLG +
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y E+ AL Y HS I++RD+KP N+++D Q + L D+GL + E+N
Sbjct: 141 ARFYAAEIASALGYLHSLNIVYRDLKPENILLD-SQGHIVLTDFGLCK---ENIEHN-ST 195
Query: 290 ASRYFKGPELL----VDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
S + PE L + Q YD ++D W LG + M++ PF+
Sbjct: 196 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 66 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 124 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
L++ + RYY+ +++ Y H ++HRD+K N+ ++ E ++++ D+GLA + + G
Sbjct: 137 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDG 195
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ V + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 196 ERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
L++ + RYY+ +++ Y H ++HRD+K N+ ++ E ++++ D+GLA + + G
Sbjct: 135 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDG 193
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ V + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 194 ERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHEQRKLRLIDWGLAEFYHPG 282
L++ D ++ ++ + + + H I+H D+KP N++ ++ + +++++ID+GLA Y P
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242
Query: 283 KEYNVRVASRYFKGPELLVDLQDYD---YSLDLWSLGCMFAGMIFRKEPFFYGHD 334
++ V + F PE++ +YD + D+WS+G + ++ PF +D
Sbjct: 243 EKLKVNFGTPEFLAPEVV----NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXX---XXXXXXXXLQNLCGGPN 190
+D+++V+ +G G Y EV V+ E + + N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPTLS--DYDVRYYIYELLKALDYCHSQ 247
+VK R + L E+ + + F + P + + D + + ++L+ + Y H
Sbjct: 67 VVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGKE--YNVRVASRYFKGPELLVDLQ 304
GI HRD+KP N+++D E+ L++ D+GLA F + +E N + + PELL +
Sbjct: 125 GITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 305 DYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +D+WS G + M+ + P+
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
L++ + RYY+ +++ Y H ++HRD+K N+ ++ E ++++ D+GLA + + G
Sbjct: 111 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDG 169
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ V + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 170 ERKKVLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVR 288
R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTF 165
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 166 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
V+ +I EL+ ALDY +Q I+HRD+KP N+++D E + + D+ +A +
Sbjct: 117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLD-EHGHVHITDFNIAAMLPRETQITTMA 175
Query: 290 ASRYFKGPELLVDLQ--DYDYSLDLWSLGCMFAGMIFRKEPF 329
++ + PE+ + Y +++D WSLG ++ + P+
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVR 288
R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 110 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTF 168
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 169 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 209
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVR 288
R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTF 165
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 166 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVH-CTDNEXXXXXXXXXXXXXXXXXXXXXLQNLC---GGP 189
D+Y++ +G+G +S V V CT +E +C
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + ++ L+F+ V + V S+ D + I ++L+A+ +CH
Sbjct: 64 NIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDL 303
G++HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK- 180
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ Y +D+W+ G + ++ PF+
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPFW 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPG 282
L + + Y Y++L A+ Y H GI+HRD+KP NV++ ++ +++ D+G ++
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 283 KEYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + PE+LV + Y+ ++D WSLG + + PF
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
++Y E+ AL+Y HS+ I++RD+KP N+++D + +++ D+G A+ Y P Y +
Sbjct: 108 AKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-KNGHIKITDFGFAK-YVPDVTYXLCG 165
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE +V + Y+ S+D WS G + M+ PF+
Sbjct: 166 TPDYI-APE-VVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPG 282
L + + Y Y++L A+ Y H GI+HRD+KP NV++ ++ +++ D+G ++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 283 KEYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + PE+LV + Y+ ++D WSLG + + PF
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 141 KVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQ------NLCGGPNIVKL 194
++G+G + EV++G+ DN +Q + C P I +
Sbjct: 26 RIGKGSFGEVYKGI---DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY 82
Query: 195 LDIVRDQQSKTPSLIFEHVNN-TDFKVLYP-TLSDYDVRYYIYELLKALDYCHSQGIMHR 252
+S +I E++ + +L P L + + + E+LK LDY HS+ +HR
Sbjct: 83 FGSYL--KSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 253 DVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD 311
D+K NV++ EQ ++L D+G+A + + N V + ++ PE ++ YD+ D
Sbjct: 141 DIKAANVLLS-EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDFKAD 198
Query: 312 LWSLGC 317
+WSLG
Sbjct: 199 IWSLGI 204
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Query: 201 QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVR---YYIYELLKALDYCHSQGIMHRDVKPH 257
Q + + E++N D + +D+ +Y E++ L + HS+GI++RD+K
Sbjct: 88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 147
Query: 258 NVMIDHEQRKLRLIDWGLAEFYHPG-KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLG 316
N+++D + +++ D+G+ + G + N + + PE+L+ Q Y++S+D WS G
Sbjct: 148 NILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNHSVDWWSFG 205
Query: 317 CMFAGMIFRKEPFFYGHD 334
+ M+ + P F+G D
Sbjct: 206 VLLYEMLIGQSP-FHGQD 222
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 73 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 189
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 231
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 73 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 189
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 231
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE-FYHPGK 283
+ + D + + ++L+ + Y H GI HRD+KP N+++D E+ L++ D+GLA F + +
Sbjct: 101 MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLATVFRYNNR 159
Query: 284 E--YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
E N + + PELL + + +D+WS G + M+ + P+
Sbjct: 160 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVR 288
R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXF 165
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 166 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVR 288
R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXF 165
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 166 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVR 288
R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 112 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXF 170
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 171 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
L + + + E+L+ L+Y H G +HRDVK N+++ E +++ D+G++ F G +
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGD 171
Query: 285 YNVRVASRYFKG------PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ F G PE++ ++ YD+ D+WS G + P+
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
L + + + E+L+ L+Y H G +HRDVK N+++ E +++ D+G++ F G +
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGD 176
Query: 285 YNVRVASRYFKG------PELLVDLQDYDYSLDLWSLG 316
+ F G PE++ ++ YD+ D+WS G
Sbjct: 177 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVR 288
R+Y E++ AL+Y HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXF 165
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 166 CGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 66/120 (55%), Gaps = 5/120 (4%)
Query: 226 SDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMI--DHEQRKLRLIDWGLAEFYHPGK 283
++ D I ++L A+ Y H GI+HRD+KP N++ E+ K+ + D+GL++ G
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVK 341
+ + + PE+L + Y ++D WS+G + ++ PF+ +D+ ++Q++K
Sbjct: 178 VMSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILK 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Query: 201 QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVR---YYIYELLKALDYCHSQGIMHRDVKPH 257
Q + + E++N D + +D+ +Y E++ L + HS+GI++RD+K
Sbjct: 89 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 148
Query: 258 NVMIDHEQRKLRLIDWGLAEFYHPG-KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLG 316
N+++D + +++ D+G+ + G + N + + PE+L+ Q Y++S+D WS G
Sbjct: 149 NILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHSVDWWSFG 206
Query: 317 CMFAGMIFRKEPFFYGHD 334
+ M+ + P F+G D
Sbjct: 207 VLLYEMLIGQSP-FHGQD 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
L++ + RYY+ +++ Y H ++HRD+K N+ ++ E ++++ D+GLA + + G
Sbjct: 117 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDG 175
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 176 ERKKTLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 123 YESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXL 182
YE +T +D +E++ ++G G + +V++ + + +
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 183 QNL--CGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY--PTLSDYDVRYYIYELL 238
L C PNIVKLLD + + + F D +L L++ ++ + L
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGP 297
AL+Y H I+HRD+K N++ + ++L D+G+ A+ + + + + Y+ P
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAP 204
Query: 298 ELLV----DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
E+++ + YDY D+WSLG M EP + + L+KIAK
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 123 YESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXL 182
YE +T +D +E++ ++G G + +V++ + + +
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 183 QNL--CGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY--PTLSDYDVRYYIYELL 238
L C PNIVKLLD + + + F D +L L++ ++ + L
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGP 297
AL+Y H I+HRD+K N++ + ++L D+G+ A+ + + + + Y+ P
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 204
Query: 298 ELLV----DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
E+++ + YDY D+WSLG M EP + + L+KIAK
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHC-TDNEXXXXXXXXXXXXXXXXXXXXXLQNLC---GGP 189
D+Y++ ++G+G +S V + T E +C P
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + ++ L+F+ V + V S+ D + I ++L+++++CH
Sbjct: 64 NIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDL 303
GI+HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK- 180
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +D+W+ G + ++ PF+
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
L++ + RYY+ +++ Y H ++HRD+K N+ ++ E ++++ D+GLA + + G
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDG 171
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 172 ERKKTLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
L++ + RYY+ +++ Y H ++HRD+K N+ ++ E ++++ D+GLA + + G
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDG 171
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + PE+L + + + +D+WS+GC+ ++ K PF
Sbjct: 172 ERKKTLCGTPNYIAPEVLSK-KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+GLA+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGLAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEFYHPGK 283
L++ ++ ++L+AL++ HS+ I+HRD+K NV++ E +RL D+G+ A+ +
Sbjct: 106 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQ 164
Query: 284 EYNVRVASRYFKGPELLV--DLQD--YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQL 339
+ + + + Y+ PE+++ ++D YDY D+WSLG M + EP + + L
Sbjct: 165 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHELNPMRVL 223
Query: 340 VKIAK 344
+KIAK
Sbjct: 224 LKIAK 228
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDF--KVL--YPTLSDYDVRYYIYELLKALDYC 244
P +V L D D +I+E ++ + KV + +S+ + Y+ ++ K L +
Sbjct: 214 PTLVNLHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 245 HSQGIMHRDVKPHNVMIDHEQ-RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
H +H D+KP N+M ++ +L+LID+GL P + V + F PE + +
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE-VAEG 330
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ Y D+WS+G + ++ PF G +N D+ ++ K
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVK 369
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIV+L D + ++ LIF+ V + V S+ D + I ++L+A+ +CH
Sbjct: 81 PNIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 246 SQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVD 302
G++HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +DLW+ G + ++ PF+
Sbjct: 199 -DPYGKPVDLWACGVILYILLVGYPPFW 225
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 123 YESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXL 182
YE +T +D +E++ ++G G + +V++ + + +
Sbjct: 26 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 85
Query: 183 QNL--CGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY--PTLSDYDVRYYIYELL 238
L C PNIVKLLD + + + F D +L L++ ++ + L
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEFYHPGKEYNVRVASRYFKGP 297
AL+Y H I+HRD+K N++ + ++L D+G+ A+ + + + + Y+ P
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAP 204
Query: 298 ELLV----DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
E+++ + YDY D+WSLG M EP + + L+KIAK
Sbjct: 205 EVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 254
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEFYHPGK 283
L++ ++ ++L+AL++ HS+ I+HRD+K NV++ E +RL D+G+ A+ +
Sbjct: 114 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQ 172
Query: 284 EYNVRVASRYFKGPELLV--DLQD--YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQL 339
+ + + + Y+ PE+++ ++D YDY D+WSLG M + EP + + L
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHELNPMRVL 231
Query: 340 VKIAK 344
+KIAK
Sbjct: 232 LKIAK 236
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNI+K+ ++ D ++ + E + + + LS+ V + +++ AL
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR--GKALSEGYVAELMKQMMNAL 137
Query: 242 DYCHSQGIMHRDVKPHNVMID--HEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y HSQ ++H+D+KP N++ +++ID+GLAE + + + + PE+
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+D + D+WS G + ++ PF
Sbjct: 198 FK--RDVTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHC-TDNEXXXXXXXXXXXXXXXXXXXXXLQNLC---GGP 189
D+Y++ ++G+G +S V + T E +C P
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + ++ L+F+ V + V S+ D + I ++L+++++CH
Sbjct: 64 NIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDL 303
GI+HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK- 180
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +D+W+ G + ++ PF+
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 189 PNIVKLLD--IVRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
PNIV LD +V D+ ++ E++ V + + + E L+AL++
Sbjct: 77 PNIVNYLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDL 303
HS ++HRD+K N+++ + ++L D+G P + + + V + Y+ PE +V
Sbjct: 133 HSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTR 190
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
+ Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 236
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 188 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 232 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 192 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 227
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 187 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 222
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 186 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 193 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 228
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 194 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+GLA+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIQVTDFGLAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 202 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 237
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 238 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 273
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDF--KVL--YPTLSDYDVRYYIYELLKALDYC 244
P +V L D D +I+E ++ + KV + +S+ + Y+ ++ K L +
Sbjct: 108 PTLVNLHDAFEDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 245 HSQGIMHRDVKPHNVMIDHEQ-RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDL 303
H +H D+KP N+M ++ +L+LID+GL P + V + F PE + +
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE-VAEG 224
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ Y D+WS+G + ++ PF G +N D+ ++ K
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVK 263
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 188 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 189 PNIVKLLD--IVRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
PNIV LD +V D+ ++ E++ V + + + E L+AL++
Sbjct: 77 PNIVNYLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDL 303
HS ++HRD+K N+++ + ++L D+G P + + + V + Y+ PE +V
Sbjct: 133 HSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTR 190
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
+ Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 236
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL-------YPTLSDYDVRYYIYELLKALD 242
N+++L+D++ +++ + ++ E+ ++L +P + Y +L+ L+
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHG---YFCQLIDGLE 123
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVA--SRYFKGPEL 299
Y HSQGI+H+D+KP N+++ L++ G+AE HP + R + S F+ PE+
Sbjct: 124 YLHSQGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEI 182
Query: 300 LVDLQDYD-YSLDLWSLGCMFAGMIFRKEPF 329
L + + +D+WS G + PF
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCH 245
PN++ L ++ ++ LI E V DF +L++ + ++ ++L + Y H
Sbjct: 74 PNVITLHEVYENKTDVI--LIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 246 SQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
S I H D+KP N+M+ + + ++++ID+GLA G E+ + F PE +V+
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE-IVN 190
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ D+WS+G + ++ PF G + L ++ V
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAV 232
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 189 PNIVKLLD--IVRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
PNIV LD +V D+ ++ E++ V + + + E L+AL++
Sbjct: 78 PNIVNYLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDL 303
HS ++HRD+K N+++ + ++L D+G P + + + V + Y+ PE +V
Sbjct: 134 HSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTR 191
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
+ Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 237
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
S+ R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 245 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDG 303
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF-YGHDNYDQLVK 341
+ + PE+L D DY ++D W LG + M+ + PF+ H+ +L+
Sbjct: 304 ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362
Query: 342 IAKV 345
+ ++
Sbjct: 363 MEEI 366
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
S+ R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 248 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDG 306
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF-YGHDNYDQLVK 341
+ + PE+L D DY ++D W LG + M+ + PF+ H+ +L+
Sbjct: 307 ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 365
Query: 342 IAKV 345
+ ++
Sbjct: 366 MEEI 369
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEFYHPGKEYNVRVASRYFK 295
+L+AL Y H+QG++HRD+K ++++ + R ++L D+G A+ + V + Y+
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLDGR-VKLSDFGFCAQISKDVPKRKXLVGTPYWM 208
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
PE ++ Y +D+WSLG M M+ + P+F
Sbjct: 209 APE-VISRSLYATEVDIWSLGIMVIEMVDGEPPYF 242
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL-AEFYHPG 282
TL + + Y E+L+ L + H ++HRD+K NV++ E +++L+D+G+ A+
Sbjct: 125 TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-ENAEVKLVDFGVSAQLDRTV 183
Query: 283 KEYNVRVASRYFKGPELLVDLQD----YDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
N + + Y+ PE++ ++ YD+ DLWSLG M P H
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 96 SVRRSGAPSKARVYSDINVVRPREYW----DYESLTVQWGEQDDYEVVRKVGRGKYSEVF 151
SV S AP A + D YW + ++L+ D +EV ++GRG S V+
Sbjct: 25 SVTASAAPGTASLVPD--------YWIDGSNRDALS------DFFEVESELGRGATSIVY 70
Query: 152 EGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLLDIVRDQQSKTP---SL 208
+ + PNI+KL +I +TP SL
Sbjct: 71 RCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTEISL 125
Query: 209 IFEHVNNT---DFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM--IDH 263
+ E V D V S+ D + ++L+A+ Y H GI+HRD+KP N++
Sbjct: 126 VLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA 185
Query: 264 EQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
L++ D+GL++ + + PE+L Y +D+WS+G + ++
Sbjct: 186 PDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILL 244
Query: 324 FRKEPFF 330
EPF+
Sbjct: 245 CGFEPFY 251
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 204 KTPSLIF---EHVNNTDFKVLYPTLSDYD---VRYYIYELLKALDYCHSQGIMHRDVKPH 257
+TP +F E VN D +D R+Y E++ AL + H +GI++RD+K
Sbjct: 94 QTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLD 153
Query: 258 NVMIDHEQRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLG 316
NV++DHE +L D+G+ E G + + PE+L ++ Y ++D W++G
Sbjct: 154 NVLLDHEGH-CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML-YGPAVDWWAMG 211
Query: 317 CMFAGMIFRKEPF 329
+ M+ PF
Sbjct: 212 VLLYEMLCGHAPF 224
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 209 IFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK- 267
IFE +N + F+ L++ ++ Y++++ +AL + HS I H D++P N++ +
Sbjct: 88 IFERINTSAFE-----LNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST 142
Query: 268 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD-YDYSLDLWSLGCMFAGMIFRK 326
+++I++G A PG + + + + PE V D + D+WSLG + ++
Sbjct: 143 IKIIEFGQARQLKPGDNFRLLFTAPEYYAPE--VHQHDVVSTATDMWSLGTLVYVLLSGI 200
Query: 327 EPFF 330
PF
Sbjct: 201 NPFL 204
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 189 PNIVKLLD--IVRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
PNIV LD +V D+ ++ E++ V + + + E L+AL++
Sbjct: 77 PNIVNYLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 132
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDL 303
HS ++HRD+K N+++ + ++L D+G P + + + V + Y+ PE +V
Sbjct: 133 HSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE-VVTR 190
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
+ Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 236
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVA 185
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D+WSLG + ++ PF+ H
Sbjct: 186 PEVL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
+++ + RY++ + ++ + Y H+ ++HRD+K N+ ++ + +++ D+GLA + G
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 196
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 197 ERKKTLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCH 245
PNIV+L D + ++ LIF+ V + V S+ D + I ++L+A+ +CH
Sbjct: 70 PNIVRLHDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 246 SQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVD 302
G++HR++KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 303 LQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +DLW+ G + ++ PF+
Sbjct: 188 -DPYGKPVDLWACGVILYILLVGYPPFW 214
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
S+ R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 106 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDG 164
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 165 ATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
S+ R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 105 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDG 163
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF-YGHDNYDQLVK 341
+ + PE+L D DY ++D W LG + M+ + PF+ H+ +L+
Sbjct: 164 ATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 222
Query: 342 IAKV 345
+ ++
Sbjct: 223 MEEI 226
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
S+ R+Y E++ ALDY HS+ +++RD+K N+M+D + +++ D+GL E G
Sbjct: 107 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDG 165
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + PE+L D DY ++D W LG + M+ + PF+
Sbjct: 166 ATMKXFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFY 212
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A+ + Y+
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
PE+L + YD S D WSLG + ++ PF+ H
Sbjct: 232 PEVL-GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNH 267
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 189 PNIVKLLD--IVRDQQSKTPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLKALDYC 244
PNIV LD +V D+ ++ E++ V + + + E L+AL++
Sbjct: 78 PNIVNYLDSYLVGDELW----VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL 133
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK-EYNVRVASRYFKGPELLVDL 303
HS ++HR++K N+++ + ++L D+G P + + + V + Y+ PE +V
Sbjct: 134 HSNQVIHRNIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTR 191
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
+ Y +D+WSLG M MI + P+ ++N + + + GT EL
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPEL 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+G A+ G+ + +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKRVK-GRTWXLCG 201
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
+++ + RY++ + ++ + Y H+ ++HRD+K N+ ++ + +++ D+GLA + G
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 196
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 197 ERKKXLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N+MID +Q +++ D+G A+ G+ + +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID-QQGYIKVTDFGFAKRVK-GRTWXLCG 200
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 201 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVM-------------IDHEQRKL-----RLI 271
+R Y++ K++++ HS + H D+KP N++ I ++R L +++
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 272 DWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFY 331
D+G A + + ++ V++R+++ PE+++ L + D+WS+GC+ + F
Sbjct: 180 DFGSATY--DDEHHSTLVSTRHYRAPEVILAL-GWSQPCDVWSIGCILIEY-YLGFTVFP 235
Query: 332 GHDNYDQLVKIAKVLG 347
HD+ + L + ++LG
Sbjct: 236 THDSKEHLAMMERILG 251
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID EQ +++ D+G A+ G+
Sbjct: 125 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-EQGYIQVTDFGFAKRVK-GRT 182
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 183 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLXGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLAGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWG-LAEFYHPGK-EYNV 287
R+YI E++ A+D H +HRD+KP NV++D +RL D+G + G + +V
Sbjct: 193 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD-VNGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 288 RVASRYFKGPELLVDLQD----YDYSLDLWSLGCMFAGMIFRKEPFF 330
V + + PE+L ++D Y D WSLG M++ + PF+
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Query: 226 SDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNV--MIDHEQRKLRLIDWGLAEFYHPGK 283
++ D I ++L A+ Y H GI+HRD+KP N+ + E K+ + D+GL++ G
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + + PE+L + Y ++D WS+G + ++ PF+
Sbjct: 164 -MSTACGTPGYVAPEVLAQ-KPYSKAVDCWSIGVITYILLCGYPPFY 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
+ +Y ++L+ L Y H I+HRD+K NV+I+ L++ D+G ++ + +
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK-----RLAGINP 178
Query: 290 ASRYFKG------PELL-VDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ F G PE++ + Y + D+WSLGC M K PF+
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWG--LAEFYHPGKEYNV 287
R+YI E++ A+D H +HRD+KP NV++D +RL D+G L + +V
Sbjct: 177 ARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD-VNGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 288 RVASRYFKGPELLVDLQD----YDYSLDLWSLGCMFAGMIFRKEPFF 330
V + + PE+L ++D Y D WSLG M++ + PF+
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
+ +Y ++L+ L Y H I+HRD+K NV+I+ L++ D+G ++ + +
Sbjct: 110 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK-----RLAGINP 164
Query: 290 ASRYFKG------PELL-VDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ F G PE++ + Y + D+WSLGC M K PF+
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIIIS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXX----XXXXXXXLQNLCGGP 189
DDY++ ++G+G +S V V T + + L P
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDF---KVLYPTLSDYDVRYYIYELLKALDYCHS 246
NIV+L D + ++ L+F+ V + V S+ D + I+++L+++++ H
Sbjct: 91 NIVRLHDSISEEGFHY--LVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 247 QGIMHRDVKPHNVMIDHEQR--KLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDL 303
I+HRD+KP N+++ + + ++L D+GLA E + + + + PE+L
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK- 207
Query: 304 QDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y +D+W+ G + ++ PF+
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFW 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WTLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDT 208
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 209 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 107 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDT 164
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 165 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDT 208
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 104 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDT 161
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDT 208
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 209 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIKVADFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIKVADFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
+++ + RY++ + ++ + Y H+ ++HRD+K N+ ++ + +++ D+GLA + G
Sbjct: 138 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 196
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 197 ERKKDLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 124 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 181
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 182 WTLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 103 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDT 160
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 161 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIKVADFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDX 180
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 181 XXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-EFYHPG 282
+++ + RY++ + ++ + Y H+ ++HRD+K N+ ++ + +++ D+GLA + G
Sbjct: 122 AVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDG 180
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + + PE+L + + + +D+WSLGC+ ++ K PF
Sbjct: 181 ERKKDLCGTPNYIAPEVLCK-KGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIKVADFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYQMAAGYPPFF 239
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQNLCGG 188
DD+++VR +G+GK+ V+ + + +Q+
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVR---YYIYELLKALDYCH 245
PNI+++ + D+ K L+ E + +D + ++ EL AL YCH
Sbjct: 74 PNILRMYNYFHDR--KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ ++HRD+KP N+++ ++ +L++ D+G + + P + + PE +++ +
Sbjct: 132 ERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE-MIEGKT 188
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D +DLW G + + PF
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 216
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 217 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
++ ++ + Y +L+A+ H GI+H D+KP N +I L+LID+G+A P
Sbjct: 123 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDT 180
Query: 284 EYNVR---VASRYFKGPELLVDLQD----------YDYSLDLWSLGCMFAGMIFRKEPF 329
V+ V + + PE + D+ D+WSLGC+ M + K PF
Sbjct: 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 187 GGPNIVKLLDIVRDQQSKTPSL--IFEHVNNTD-FKVLYP----TLSDYDVRYYIYELLK 239
GGP+IV +LD+ + L I E + + F + ++ + + ++
Sbjct: 80 GGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT 139
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
A+ + HS I HRDVKP N++ +++ L+L D+G A+ + Y+ P
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAP 198
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
E+L + YD S D+WSLG + ++ PF+
Sbjct: 199 EVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFY 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 196
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 197 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 187 GGPNIVKLLDIVRDQQSKTPSL--IFEHVNNTD-FKVLYP----TLSDYDVRYYIYELLK 239
GGP+IV +LD+ + L I E + + F + ++ + + ++
Sbjct: 61 GGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT 120
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
A+ + HS I HRDVKP N++ +++ L+L D+G A+ + Y+ P
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAP 179
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
E+L + YD S D+WSLG + ++ PF+
Sbjct: 180 EVL-GPEKYDKSCDMWSLGVIMYILLCGFPPFY 211
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 131 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 188
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 189 WXLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWG--LAEFYHPGKEYNV 287
R+Y+ E++ A+D H +HRD+KP N+++D +RL D+G L + +V
Sbjct: 177 ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSV 235
Query: 288 RVASRYFKGPELLVDLQD----YDYSLDLWSLGCMFAGMIFRKEPFF 330
V + + PE+L ++ Y D WSLG M++ + PF+
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GAT 216
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 217 WTLCGTPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 189 PNIVKLLDIVRDQQSKTPS----LIFEHVNNTDFKVLYPT------LSDYDVRYYIYELL 238
PN+V ++ Q P+ L E+ D + L + +R + ++
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKL--RLIDWGLAEFYHPGKEYNVRVASRYFKG 296
AL Y H I+HRD+KP N+++ ++L ++ID G A+ G+ V + +
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
PELL + + Y ++D WS G + I PF
Sbjct: 192 PELL-EQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 189 PNIVKLLDIVRDQQSKTPS----LIFEHVNNTDFKVLYPT------LSDYDVRYYIYELL 238
PN+V ++ Q P+ L E+ D + L + +R + ++
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKL--RLIDWGLAEFYHPGKEYNVRVASRYFKG 296
AL Y H I+HRD+KP N+++ ++L ++ID G A+ G+ V + +
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
PELL + + Y ++D WS G + I PF
Sbjct: 193 PELL-EQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 164 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 221
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 222 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 200
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 201 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 200
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 201 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 200
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 201 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 200
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 201 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 200
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 201 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 144 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 201
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 202 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 200
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 201 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 69/136 (50%), Gaps = 22/136 (16%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVM-------------IDHEQRKL-----RLI 271
+R Y++ K++++ HS + H D+KP N++ I ++R L +++
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 272 DWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFY 331
D+G A + + ++ V R+++ PE+++ L + D+WS+GC+ + F
Sbjct: 180 DFGSATY--DDEHHSTLVXXRHYRAPEVILAL-GWSQPCDVWSIGCILIEY-YLGFTVFP 235
Query: 332 GHDNYDQLVKIAKVLG 347
HD+ + L + ++LG
Sbjct: 236 THDSKEHLAMMERILG 251
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 136 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 193
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 194 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRV 289
R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+ + +
Sbjct: 138 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRTWXLCG 195
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
Y PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 196 TPEYL-APEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 208 LIFEHVNNTD-FKVLYPTL----SDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 262
LI E+ + F + P L S+ DV I ++L+ + Y H I+H D+KP N+++
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 263 --HEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYD---YSLDLWSLGC 317
+ ++++D+G++ E + + + PE+L +YD + D+W++G
Sbjct: 166 SIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL----NYDPITTATDMWNIG- 220
Query: 318 MFAGMIFRKEPFFYGHDNYDQLVKIAKV 345
+ A M+ F G DN + + I++V
Sbjct: 221 IIAYMLLTHTSPFVGEDNQETYLNISQV 248
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNV-MIDHEQRKLRLIDWGL-AEFYHPGKEYNVRVASRY 293
++ K +DY HS+ ++HRD+KP N+ ++D +Q +++ D+GL + GK + RY
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDGKRTRSKGTLRY 201
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
PE + QDY +DL++LG + A ++
Sbjct: 202 M-SPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV+ +++ + + +FE + N S+ + R++ +L+ +
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGV 127
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
YCH+ + HRD+K N ++D +L++ D+G ++ + V + + PE+L
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 301 VDLQDYDYSL-DLWSLGCMFAGMIFRKEPF 329
+ ++YD + D+WS G M+ PF
Sbjct: 188 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV+ +++ + + +FE + N S+ + R++ +L+ +
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGV 128
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
YCH+ + HRD+K N ++D +L++ D+G ++ + V + + PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 301 VDLQDYDYSL-DLWSLGCMFAGMIFRKEPF 329
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPS-----LIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKA 240
P IV + D +++TP+ ++ E+V+ + + T ++ I + +A
Sbjct: 72 PAIVAVYDT---GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFK 295
L++ H GI+HRDVKP N+MI ++++D+G+A + A ++Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ D D D++SLGC+ ++ + PF
Sbjct: 188 PEQARGD--SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY----------YIYELLK 239
NIV ++D+ D++ L+ E++ PTLS+Y + + ++L
Sbjct: 72 NIVSMIDV--DEEDDCYYLVMEYIEG-------PTLSEYIESHGPLSVDTAINFTNQILD 122
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK--EYNVRVASRYFKGP 297
+ + H I+HRD+KP N++ID + L++ D+G+A+ + N + + + P
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILID-SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
E + D D++S+G + M+ + PF
Sbjct: 182 E-QAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPS-----LIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKA 240
P IV + D +++TP+ ++ E+V+ + + T ++ I + +A
Sbjct: 72 PAIVAVYDT---GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFK 295
L++ H GI+HRDVKP N+MI ++++D+G+A + A ++Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ D D D++SLGC+ ++ + PF
Sbjct: 188 PEQARGD--SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 186 CGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY--PTLSDYDVRYYIYELLKALDY 243
C PNIVKLLD + + + F D +L L++ ++ + L AL+Y
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 123
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR-------YFKG 296
H I+HRD+K N++ + D LA+F K + R Y+
Sbjct: 124 LHDNKIIHRDLKAGNILFTLDG------DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMA 177
Query: 297 PELLV----DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
PE+++ + YDY D+WSLG M EP + + L+KIAK
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEMA-EIEPPHHELNPMRVLLKIAK 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPS-----LIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKA 240
P IV + D +++TP+ ++ E+V+ + + T ++ I + +A
Sbjct: 72 PAIVAVYDT---GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFK 295
L++ H GI+HRDVKP N+MI ++++D+G+A + A ++Y
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ D D D++SLGC+ ++ + PF
Sbjct: 188 PEQARGD--SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPS-----LIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKA 240
P IV + D +++TP+ ++ E+V+ + + T ++ I + +A
Sbjct: 89 PAIVAVYDT---GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFK 295
L++ H GI+HRDVKP N+MI ++++D+G+A + A ++Y
Sbjct: 146 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ D D D++SLGC+ ++ + PF
Sbjct: 205 PEQARGD--SVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 20/114 (17%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAK------- 189
Query: 285 YNVRVASRYFK--------GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
RV R + PE+++ + Y+ ++D W+LG + M PFF
Sbjct: 190 ---RVKGRTWXLCGTPEALAPEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVAS 291
YY+ + L+ L+Y HS+ I+H DVK NV++ + L D+G A P +
Sbjct: 189 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 292 RYFKG------PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEP---FFYG 332
Y G PE+++ + D +D+WS CM M+ P FF G
Sbjct: 249 DYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 187 GGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVR---YYIYELLKALDY 243
G NI++L++ D L+FE + ++ R + ++ ALD+
Sbjct: 69 GNKNILELIEFFEDDTRFY--LVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDF 126
Query: 244 CHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYH--------PGKEYNVRVASRY 293
H++GI HRD+KP N++ + ++ +++ D+ L E S
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 294 FKGPELLVDLQD----YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
+ PE++ D YD DLWSLG + M+ PF GH D
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV-GHCGAD 233
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
S+ R+Y +++ +Y HS +++RD+KP N++ID +Q +++ D+G A+ G+
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-QQGYIQVTDFGFAKRVK-GRT 195
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFF 330
+ + Y P +++ + Y+ ++D W+LG + M PFF
Sbjct: 196 WXLCGTPEYL-APAIILS-KGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQNLCGG 188
DD+++ R +G+GK+ V+ + + +Q+
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVR---YYIYELLKALDYCH 245
PNI+++ + D+ K L+ E + +D + ++ EL AL YCH
Sbjct: 74 PNILRMYNYFHDR--KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ ++HRD+KP N+++ ++ +L++ D+G + + P + + PE +++ +
Sbjct: 132 ERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE-MIEGKT 188
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D +DLW G + + PF
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 13/204 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQNLCGG 188
DD+++ R +G+GK+ V+ + + +Q+
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVR---YYIYELLKALDYCH 245
PNI+++ + D+ K L+ E + +D + ++ EL AL YCH
Sbjct: 75 PNILRMYNYFHDR--KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 132
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ ++HRD+KP N+++ ++ +L++ D+G + + P + + PE +++ +
Sbjct: 133 ERKVIHRDIKPENLLMGYKG-ELKIADFGWS-VHAPSLRRRXMCGTLDYLPPE-MIEGKT 189
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPF 329
+D +DLW G + + PF
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP--TLSDYDVRYYIYELLKALDYCHSQ 247
+I+K DQ K+ L+ E+V + P ++ + + ++ + + Y HSQ
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 303
+HR++ NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 137 HYIHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 304 QDYDYSLDLWSLG 316
+ Y Y+ D+WS G
Sbjct: 196 KFY-YASDVWSFG 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 206 PSLIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 262
P ++ E+V+ + + T ++ I + +AL++ H GI+HRDVKP N+MI
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 263 HEQRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFKGPELLVDLQDYDYSLDLWSLGC 317
++++D+G+A + A ++Y + D D D++SLGC
Sbjct: 151 -ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGC 207
Query: 318 MFAGMIFRKEPF 329
+ ++ + PF
Sbjct: 208 VLYEVLTGEPPF 219
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYH-- 280
++ + + ++ ALD+ H++GI HRD+KP N++ +H + +++ D+GL
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 281 ------PGKEYNVRVASRYFKGPELLVDLQD----YDYSLDLWSLGCMFAGMIFRKEPF 329
E S + PE++ + YD DLWSLG + ++ PF
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVAS 291
YY+ + L+ L+Y H++ I+H DVK NV++ + + L D+G A P +
Sbjct: 154 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213
Query: 292 RYFKG------PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
Y G PE+++ + D +D+WS CM M+ P+
Sbjct: 214 DYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++KAL Y + G++HRDVKP N+++D E+ +++L D+G++ K + +
Sbjct: 133 IVKALYYLKEKHGVIHRDVKPSNILLD-ERGQIKLCDFGISGRLVDDKAKDRSAGCAAYM 191
Query: 296 GPELL----VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
PE + DYD D+WSLG + + P+ +++ L K+
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKV 242
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 186 CGG---PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVL---YPTLSDYDVRYYIYELLK 239
C G P IV L VR+ ++ E + L L + YY+ + L+
Sbjct: 118 CAGLSSPRIVPLYGAVRE--GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALE 175
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG--- 296
L+Y H++ I+H DVK NV++ + + L D+G A P + Y G
Sbjct: 176 GLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET 235
Query: 297 ---PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
PE+++ + D +D+WS CM M+ P+
Sbjct: 236 HMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVAS 291
YY+ + L+ L+Y H++ I+H DVK NV++ + + L D+G A P +
Sbjct: 170 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 229
Query: 292 RYFKG------PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
Y G PE+++ + D +D+WS CM M+ P+
Sbjct: 230 DYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVAS 291
YY+ + L+ L+Y HS+ I+H DVK NV++ + L D+G A P +
Sbjct: 170 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 292 RYFKG------PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEP---FFYG 332
Y G PE+++ + D +D+WS CM M+ P FF G
Sbjct: 230 DYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 230 VRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR 288
++ I +L + Y H++ I HRDVKP N+++D R ++L D+G +E Y K+
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR-VKLSDFGESE-YMVDKKIKGS 210
Query: 289 VASRYFKGPELLVDLQDYD-YSLDLWSLGCMFAGMIFRKEPF 329
+ F PE + Y+ +D+WSLG M + PF
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPS-----LIFEHVNNTDFKVLYPT---LSDYDVRYYIYELLKA 240
P IV + D +++TP+ ++ E+V+ + + T ++ I + +A
Sbjct: 72 PAIVAVYDT---GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-----SRYFK 295
L++ H GI+HRDVKP N++I ++++D+G+A + A ++Y
Sbjct: 129 LNFSHQNGIIHRDVKPANILIS-ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 296 GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ D D D++SLGC+ ++ + PF
Sbjct: 188 PEQARGD--SVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP--TLSDYDVRYYIYELLKALDYCHSQ 247
+I+K DQ K+ L+ E+V + P ++ + + ++ + + Y H+Q
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 303
+HR++ NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 137 HYIHRNLAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 304 QDYDYSLDLWSLG 316
+ Y Y+ D+WS G
Sbjct: 196 KFY-YASDVWSFG 207
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 18/132 (13%)
Query: 236 ELLKALDYCHSQ-GIMHRDVKPHNVMID-----HEQRKLRLIDWGLAEFYHPGKEYNVRV 289
+LL LDY H + GI+H D+KP NV+++ ++++ D G A +Y + Y +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNSI 196
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI---FRKEP---FFYGHDNYDQLVKIA 343
+R ++ PE+L+ + D+WS C+ +I F EP Y D+ D + +I
Sbjct: 197 QTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD-DHIAQII 254
Query: 344 KVLGTDELNAYL 355
++LG EL +YL
Sbjct: 255 ELLG--ELPSYL 264
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 18/132 (13%)
Query: 236 ELLKALDYCHSQ-GIMHRDVKPHNVMID-----HEQRKLRLIDWGLAEFYHPGKEYNVRV 289
+LL LDY H + GI+H D+KP NV+++ ++++ D G A +Y + Y +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DEHYTNSI 196
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI---FRKEP---FFYGHDNYDQLVKIA 343
+R ++ PE+L+ + D+WS C+ +I F EP Y D+ D + +I
Sbjct: 197 QTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD-DHIAQII 254
Query: 344 KVLGTDELNAYL 355
++LG EL +YL
Sbjct: 255 ELLG--ELPSYL 264
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP--TLSDYDVRYYIYELLKALDYCHSQ 247
+IVK DQ K+ L+ E+V + P + + + ++ + + Y H+Q
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 303
+HR + NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 132 HYIHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 304 QDYDYSLDLWSLG 316
+ Y Y+ D+WS G
Sbjct: 191 KFY-YASDVWSFG 202
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP--TLSDYDVRYYIYELLKALDYCHSQ 247
+IVK DQ K+ L+ E+V + P + + + ++ + + Y H+Q
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 303
+HR + NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 131 HYIHRALAARNVLLDND-RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 304 QDYDYSLDLWSLG 316
+ Y Y+ D+WS G
Sbjct: 190 KFY-YASDVWSFG 201
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNV-MIDHEQRKLRLIDWGL-AEFYHPGKEYNVRVASRY 293
++ K +DY HS+ +++RD+KP N+ ++D +Q +++ D+GL + GK + RY
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
PE + QDY +DL++LG + A ++
Sbjct: 188 M-SPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 21/125 (16%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y+ E+L AL Y HS G+++ D+KP N+M+ EQ L+LID G + + +
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ--LKLIDLGAVSRIN---SFGYLYGTP 241
Query: 293 YFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF--------------RKEPFFYGHDNYDQ 338
F+ PE++ + D++++G A + +P +D+Y +
Sbjct: 242 GFQAPEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGR 299
Query: 339 LVKIA 343
L++ A
Sbjct: 300 LLRRA 304
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 37/226 (16%)
Query: 129 QWG-EQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXX-------XXXXXXXX 180
Q+G ++D + R +G G + EV+EGV+
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 181 XLQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHV------------NNTDFKVLYPTLSDY 228
++NL P+IVKL+ I+ ++ P+ I + N KVL L
Sbjct: 78 IMKNL-DHPHIVKLIGIIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVL--- 129
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR 288
Y ++ KA+ Y S +HRD+ N+++ + ++L D+GL+ + Y
Sbjct: 130 ----YSLQICKAMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKAS 184
Query: 289 VASRYFK--GPELLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFY 331
V K PE ++ + + + D+W CM+ + F K+PFF+
Sbjct: 185 VTRLPIKWMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 229
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV+ +++ + + +FE + N S+ + R++ +L+ +
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGV 128
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
YCH+ + HRD+K N ++D +L++ +G ++ + V + + PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 301 VDLQDYDYSL-DLWSLGCMFAGMIFRKEPF 329
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXX-------XXXXXXXXXLQNL 185
++D + R +G G + EV+EGV+ ++NL
Sbjct: 7 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 186 CGGPNIVKLLDIVRDQQSKTPSLIFEHV------------NNTDFKVLYPTLSDYDVRYY 233
P+IVKL+ I+ ++ P+ I + N KVL L Y
Sbjct: 67 -DHPHIVKLIGIIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVL-------Y 114
Query: 234 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY 293
++ KA+ Y S +HRD+ N+++ + ++L D+GL+ + Y V
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 294 FK--GPELLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFY 331
K PE ++ + + + D+W CM+ + F K+PFF+
Sbjct: 174 IKWMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 213
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXX-------XXXXXXXXXLQNL 185
++D + R +G G + EV+EGV+ ++NL
Sbjct: 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 186 CGGPNIVKLLDIVRDQQSKTPSLIFEHV------------NNTDFKVLYPTLSDYDVRYY 233
P+IVKL+ I+ ++ P+ I + N KVL L Y
Sbjct: 71 -DHPHIVKLIGIIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVL-------Y 118
Query: 234 IYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY 293
++ KA+ Y S +HRD+ N+++ + ++L D+GL+ + Y V
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 294 FK--GPELLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFY 331
K PE ++ + + + D+W CM+ + F K+PFF+
Sbjct: 178 IKWMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYP--TLSDYDVRYYIYELLKALDYCHSQ 247
+I+K D + + L+ E+V + P ++ + + ++ + + Y H+Q
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRV---ASRYFKGPELLVDL 303
+HRD+ NV++D++ R +++ D+GLA+ G E Y VR + ++ PE L +
Sbjct: 154 HYIHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 304 QDYDYSLDLWSLG 316
+ Y Y+ D+WS G
Sbjct: 213 KFY-YASDVWSFG 224
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++KAL++ HS+ ++HRDVKP NV+I + ++++ D+G++ + + + +
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLI-NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYM 220
Query: 296 GPELL---VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
PE + ++ + Y D+WSLG + + P+ + QL ++ +
Sbjct: 221 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV+ +++ + + +FE + N S+ + R++ +L+ +
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGV 128
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
Y H+ + HRD+K N ++D +L++ D+G ++ + V + + PE+L
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL 188
Query: 301 VDLQDYDYSL-DLWSLGCMFAGMIFRKEPF 329
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDN-----EXXXXXXXXXXXXXXXXXXXXXLQNLCGG 188
DD+E+ R +G+GK+ V+ + + +Q
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYP--TLSDYDVRYYIYELLKALDYCH 245
PNI++L + D+ + LI E+ + +K L T + + EL AL YCH
Sbjct: 83 PNILRLYNYFYDR--RRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 305
+ ++HRD+KP N+++ + +L++ D+G + + P + + PE +++ +
Sbjct: 141 GKKVIHRDIKPENLLLG-LKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPE-MIEGRM 197
Query: 306 YDYSLDLWSLGCMFAGMIFRKEPFFYGHDN--YDQLVKI 342
++ +DLW +G + ++ PF N Y ++VK+
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 189 PNIVKLLDIVRD-------QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
PNIV+ +++ + + +FE + N S+ + R++ +L+ +
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGV 128
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQR-KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
YCH+ + HRD+K N ++D +L++ +G ++ + V + + PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 301 VDLQDYDYSL-DLWSLGCMFAGMIFRKEPF 329
+ ++YD + D+WS G M+ PF
Sbjct: 189 LK-KEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 208 LIFEHVNNTDFKVLYPTLSDY---DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 264
+ E+VN D + + +Y E+ L + H +GI++RD+K NVM+D E
Sbjct: 97 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE 156
Query: 265 QRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKG------PELLVDLQDYDYSLDLWSLGC 317
+++ D+G+ KE+ + V +R F G PE++ Q Y S+D W+ G
Sbjct: 157 GH-IKIADFGMC------KEHMMDGVTTREFCGTPDYIAPEIIA-YQPYGKSVDWWAYGV 208
Query: 318 MFAGMIFRKEPF 329
+ M+ + PF
Sbjct: 209 LLYEMLAGQPPF 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++KAL++ HS+ ++HRDVKP NV+I + ++++ D+G++ + ++ + +
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLI-NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYM 176
Query: 296 GPELL---VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
PE + ++ + Y D+WSLG + + P+ + QL ++ +
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 208 LIFEHVNNTDFKVLYPTLS------DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 261
LI +++N + L+ LS +++V+ Y+ E++ AL++ H GI++RD+K N+++
Sbjct: 136 LILDYINGGE---LFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192
Query: 262 DHEQRKLRLIDWGLA-EFYHPGKE--YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCM 318
D + L D+GL+ EF E Y+ Y + +D ++D WSLG +
Sbjct: 193 D-SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 319 FAGMIFRKEPF 329
++ PF
Sbjct: 252 MYELLTGASPF 262
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 189 PNIVKLLDIVRDQQSK------TPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALD 242
PN+++ +D+Q + + + E+V DF L + + + L
Sbjct: 78 PNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHL-----GLEPITLLQQTTSGLA 132
Query: 243 YCHSQGIMHRDVKPHNVMID----HEQRKLRLIDWGLAEFYHPGKEYNVRVA----SRYF 294
+ HS I+HRD+KPHN++I H + K + D+GL + G+ R + + +
Sbjct: 133 HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 295 KGPELLVD--LQDYDYSLDLWSLGCMF 319
PE+L + ++ Y++D++S GC+F
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVF 219
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
+L + V Y+ + L AL + HSQG++H DVKP N+ + R +L D+GL
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR-CKLGDFGLLVELGTAG 211
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQL 339
V+ + PELL Y + D++SLG + E +G + + QL
Sbjct: 212 AGEVQEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVACNME-LPHGGEGWQQL 264
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR--KLRLIDWGLAEFYH-- 280
++ + + ++ ALD+ H++GI HRD+KP N++ +H + +++ D+ L
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167
Query: 281 ------PGKEYNVRVASRYFKGPELLVDLQD----YDYSLDLWSLGCMFAGMIFRKEPF 329
E S + PE++ + YD DLWSLG + ++ PF
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 208 LIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 264
+ E+VN D + + +Y E+ L + S+GI++RD+K NVM+D E
Sbjct: 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 478
Query: 265 QRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
+++ D+G+ E G + + PE++ Q Y S+D W+ G + M+
Sbjct: 479 GH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEML 536
Query: 324 FRKEPF 329
+ PF
Sbjct: 537 AGQAPF 542
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 208 LIFEHVNNTDFKVLYPTLSDYD---VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 264
+ E+VN D + + +Y E+ L + S+GI++RD+K NVM+D E
Sbjct: 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 157
Query: 265 QRKLRLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMI 323
+++ D+G+ E G + + PE++ Q Y S+D W+ G + M+
Sbjct: 158 GH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEML 215
Query: 324 FRKEPF 329
+ PF
Sbjct: 216 AGQAPF 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 238 LKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+KAL++ I+HRD+KP N+++D ++L D+G++ R +
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSG-NIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 297 PELL---VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
PE + Q YD D+WSLG + + P+ + +DQL ++ K
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK 244
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++KAL++ HS+ ++HRDVKP NV+I + +++ D+G++ + ++ + +
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLI-NALGQVKXCDFGISGYLVDDVAKDIDAGCKPYX 203
Query: 296 GPELL---VDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
PE + ++ + Y D+WSLG + + P+ + QL ++ +
Sbjct: 204 APERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 207 SLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR 266
S ++ H++ ++ K L D + + +DY H++ I+HRD+K +N+ + HE
Sbjct: 92 SSLYHHLHASETKFEMKKLIDI-----ARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDN 145
Query: 267 KLRLIDWGLAEF---YHPGKEYNVRVASRYFKGPEL--LVDLQDYDYSLDLWSLGCMFAG 321
+++ D+GLA + ++ S + PE+ + D Y + D+++ G +
Sbjct: 146 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 205
Query: 322 MIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNK 357
++ + P + +N DQ++++ +G L+ L+K
Sbjct: 206 LMTGQLP-YSNINNRDQIIEM---VGRGSLSPDLSK 237
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWG---LAEFYHP 281
L++ + + + + + L+ H++G HRD+KP N+++ E + + L+D G A +
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVE 189
Query: 282 G-------KEYNVRVASRYFKGPELLVDLQDY---DYSLDLWSLGCMFAGMIFRKEPF 329
G +++ + + ++ PEL +Q + D D+WSLGC+ M+F + P+
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELF-SVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 28/233 (12%)
Query: 131 GEQDDYEVVRK-------VGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXL 182
G DYE+ R+ +G G++ +V +G++ + +N L
Sbjct: 3 GSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 62
Query: 183 QNLCG-----GPNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRY 232
Q P+IVKL+ ++ ++ P I + +V +L +
Sbjct: 63 QEALTMRQFDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLIL 118
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y Y+L AL Y S+ +HRD+ NV++ ++L D+GL+ + Y
Sbjct: 119 YAYQLSTALAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 293 YFK--GPELLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
K PE ++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 178 PIKWMAPE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 207 SLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR 266
S ++ H++ ++ K L D + + +DY H++ I+HRD+K +N+ + HE
Sbjct: 104 SSLYHHLHASETKFEMKKLIDI-----ARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDN 157
Query: 267 KLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPEL--LVDLQDYDYSLDLWSLGCMFAG 321
+++ D+GLA + ++ S + PE+ + D Y + D+++ G +
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 322 MIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNK 357
++ + P + +N DQ++++ +G L+ L+K
Sbjct: 218 LMTGQLP-YSNINNRDQIIEM---VGRGSLSPDLSK 249
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 207 SLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR 266
S ++ H++ ++ K L D + + +DY H++ I+HRD+K +N+ + HE
Sbjct: 104 SSLYHHLHASETKFEMKKLIDI-----ARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDN 157
Query: 267 KLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPEL--LVDLQDYDYSLDLWSLGCMFAG 321
+++ D+GLA + ++ S + PE+ + D Y + D+++ G +
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 322 MIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAYLNK 357
++ + P + +N DQ++++ +G L+ L+K
Sbjct: 218 LMTGQLP-YSNINNRDQIIEM---VGRGSLSPDLSK 249
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY-NVRVAS 291
+ ++ AL + H + I+HRD+K N+ + + ++L D+G+A + E + +
Sbjct: 130 WFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGT 188
Query: 292 RYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYG 332
Y+ PE+ + + Y+ D+W+LGC+ + K F G
Sbjct: 189 PYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAG 228
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 221 LYPTLSDYDVRYYIYELL-------KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDW 273
LY L + ++ +++L+ + +DY H++ I+HRD+K +N+ + HE +++ D+
Sbjct: 118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDF 176
Query: 274 GLAEF---YHPGKEYNVRVASRYFKGPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKE 327
GLA + ++ S + PE ++ +QD + + D++S G + ++ +
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVLWMAPE-VIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 328 PFFYGH-DNYDQLV 340
P Y H +N DQ++
Sbjct: 236 P--YSHINNRDQII 247
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG-- 188
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 72
Query: 189 ---PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 73 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 188 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG-- 188
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 189 ---PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG-- 188
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 36 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 95
Query: 189 ---PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 96 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 211 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG-- 188
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 189 ---PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 97/235 (41%), Gaps = 22/235 (9%)
Query: 121 WDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXX 180
WD ++ + ++ ++V+++G G++ EV+ G + +
Sbjct: 3 WDKDAWEIP---RESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEA 59
Query: 181 XLQNLCGGPNIVKLLDIVRDQQS--------KTPSLIFEHVNNTDFKVLYPTLSDYDVRY 232
L +V+L +V ++ SL+ ++ KVL P L D+
Sbjct: 60 NLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA-- 117
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
++ + + Y + +HRD++ NV++ E ++ D+GLA EY R ++
Sbjct: 118 ---QIAEGMAYIERKNYIHRDLRAANVLV-SESLMCKIADFGLARVIE-DNEYTAREGAK 172
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ + PE ++ + D+WS G + ++ + + G N D + +++
Sbjct: 173 FPIKWTAPE-AINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG-- 188
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 189 ---PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCG--- 187
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 10 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 69
Query: 188 --GPNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 70 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 185 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 83 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 139
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 140 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 199 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWG-LAEFYHPGKEYN-V 287
R+Y+ E++ A+D H G +HRD+KP N+++D +RL D+G + G + V
Sbjct: 164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDR-CGHIRLADFGSCLKLRADGTVRSLV 222
Query: 288 RVASRYFKGPELLVDLQDYDY------SLDLWSLGCMFAGMIFRKEPFF 330
V + + PE+L + D W+LG M + + PF+
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 17/19 (89%)
Query: 132 EQDDYEVVRKVGRGKYSEV 150
++DD+E+++ +GRG +SEV
Sbjct: 59 QRDDFEILKVIGRGAFSEV 77
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 109 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 165
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 166 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 225 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 266
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCG--- 187
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ 64
Query: 188 --GPNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 65 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 180 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 222
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 110 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 166
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 167 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 226 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 267
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 147
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 148 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 207 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 88 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 144
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 145 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 204 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 90 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 146
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 147 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 206 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 89 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 145
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 146 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 205 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +R+ D+GLA ++Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMRIADFGLARDINNIDYYK-- 214
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 215 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH---- 280
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDX 205
Query: 281 PGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 206 XKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 242
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 86 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 142
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 143 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 202 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 147
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y S+ +HRD+ N M+D E+ +++ D+GLA E+Y + ++ ++
Sbjct: 148 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 207 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCG--- 187
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 447
Query: 188 --GPNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 448 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 563 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 246
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 247 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 283
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCG--- 187
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 447
Query: 188 --GPNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 448 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + Y K PE
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSATD-CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 563 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 260
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 261 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 295
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR--------KLRLIDWGLA 276
+++ + Y + +LKALDY H G +HR VK +++I + + L +I G
Sbjct: 109 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 168
Query: 277 E-FYHPGKEYNVRVASRYFKGPELL-VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ H +Y+V+V + PE+L +LQ YD D++S+G + PF
Sbjct: 169 QRVVHDFPKYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 221
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 190
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 191 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 227
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 31/160 (19%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-------YIYELLKAL 241
PN++K + ++ + K + I E++ + + ++ D +Y + ++ +
Sbjct: 67 PNVLKFIGVL--YKDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGM 121
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA-----EFYHP-----------GKEY 285
Y HS I+HRD+ HN ++ E + + + D+GLA E P K Y
Sbjct: 122 AYLHSMNIIHRDLNSHNCLV-RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 286 NVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFR 325
V V + Y+ PE +++ + YD +D++S G + +I R
Sbjct: 181 TV-VGNPYWMAPE-MINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 205
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 206 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 242
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR--------KLRLIDWGLA 276
+++ + Y + +LKALDY H G +HR VK +++I + + L +I G
Sbjct: 125 MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQR 184
Query: 277 E-FYHPGKEYNVRVASRYFKGPELL-VDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ H +Y+V+V + PE+L +LQ YD D++S+G + PF
Sbjct: 185 QRVVHDFPKYSVKVLP--WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF 237
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 198
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 199 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 235
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 205
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 206 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 242
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 197
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 198 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 234
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 194
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 195 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 231
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 179 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 224
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 174 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 174 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 117 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 176 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCT-DNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG-- 188
+++ E+ R +G G++ +V +G++ + +N LQ
Sbjct: 8 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 67
Query: 189 ---PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-----FKVLYPTLSDYDVRYYIYELLKA 240
P+IVKL+ ++ ++ P I + +V +L + Y Y+L A
Sbjct: 68 FDHPHIVKLIGVI----TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK--GPE 298
L Y S+ +HRD+ NV++ ++L D+GL+ + K PE
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSND-CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 299 LLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFFYGHDNYDQLVKI 342
++ + + + D+W G CM+ ++ +P F G N D + +I
Sbjct: 183 -SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP--- 281
LS D+ Y++ + ++Y S+ +HRD+ NV++ E +++ D+GLA H
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT-EDNVMKIADFGLARDIHHIDY 205
Query: 282 -GKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 206 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLL 242
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT----LSDYDVRYYIYELLKALDYCH 245
NIVK I + LI E + + K P ++ Y ++ K +DY
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV----RVASRYFKGPELLV 301
S+ +HRD+ NV+++ E + +++ D+GL + KE R + ++ PE L+
Sbjct: 144 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 302 DLQDYDYSLDLWSLG 316
+ Y S D+WS G
Sbjct: 203 QSKFYIAS-DVWSFG 216
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 179 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 224
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 133 QDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIV 192
++ ++V+K+G G++ EV+ G + + L +V
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 193 KLLDIVRDQQS--------KTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYC 244
+L +V ++ SL+ ++ KVL P L D+ ++ + + Y
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA-----QIAEGMAYI 125
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLV 301
+ +HRD++ NV++ E ++ D+GLA EY R +++ + PE +
Sbjct: 126 ERKNYIHRDLRAANVLV-SESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPE-AI 182
Query: 302 DLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ + ++WS G + ++ + + G N D + +++
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ 225
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPT----LSDYDVRYYIYELLKALDYCH 245
NIVK I + LI E + + K P ++ Y ++ K +DY
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 246 SQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV----RVASRYFKGPELLV 301
S+ +HRD+ NV+++ E + +++ D+GL + KE R + ++ PE L+
Sbjct: 132 SRQYVHRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 302 DLQDYDYSLDLWSLG 316
+ Y S D+WS G
Sbjct: 191 QSKFYIAS-DVWSFG 204
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 203
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 204 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 238
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 206
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 207 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLV-TENNVMKIADFGLARDINNIDYYK-- 201
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 202 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 236
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 214
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 215 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 214
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 215 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 214
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 215 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 214
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 215 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 142 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 201 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 246
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEF---YHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 202 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 247
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYM 189
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPFFYG 332
PE LQ YS+ D+WS+G M + P G
Sbjct: 190 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 214
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
K N R+ ++ PE L D + Y + D+WS G +
Sbjct: 215 KTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 24/97 (24%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 296
+A+ Y HS I HRDVKP N++ ++ L+L D+G A KE
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA------KETTG--------- 172
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGH 333
+ YD S D+WSLG + ++ PF+ H
Sbjct: 173 -------EKYDKSCDMWSLGVIMYILLCGYPPFYSNH 202
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ L+ I+ + P ++ ++ + D PT+ D + + ++ + ++
Sbjct: 82 PNVLALIGIMLPPEG-LPHVLLPYMCHGDLLQFIRSPQRNPTVKD--LISFGLQVARGME 138
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
Y Q +HRD+ N M+D E +++ D+GLA E+Y + + R+ ++
Sbjct: 139 YLAEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA- 196
Query: 297 PELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPFFYGHDNYD 337
L LQ Y ++ D+WS G + ++ R P + D +D
Sbjct: 197 ---LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA---EFYHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 174 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA---EFYHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 135 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 194 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 239
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 9/108 (8%)
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA---EFYHPGKEYNVRVASRYFK 295
+ +DY H++ I+HRD+K +N+ + HE +++ D+GLA + ++ S +
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 296 GPELLVDLQD---YDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
PE ++ +QD Y + D+++ G + ++ + P + +N DQ++
Sbjct: 202 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-YSNINNRDQII 247
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH----PGKE 284
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA + K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDXXKKT 216
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
N R+ ++ PE L D + Y + D+WS G +
Sbjct: 217 TNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 40/168 (23%)
Query: 182 LQNLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKAL 241
L LC G +L++ ++ +S+ P LS V Y+ +A+
Sbjct: 112 LTELCKG----QLVEFLKKMESRGP------------------LSCDTVLKIFYQTCRAV 149
Query: 242 DYCHSQG--IMHRDVKPHNVMIDHEQRKLRLIDWGLAEF--YHPG-----------KEYN 286
+ H Q I+HRD+K N+++ + Q ++L D+G A ++P +E
Sbjct: 150 QHMHRQKPPIIHRDLKVENLLLSN-QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 287 VRVASRYFKGPELLVDLQDYDYS--LDLWSLGCMFAGMIFRKEPFFYG 332
R + ++ PE++ ++ D+W+LGC+ + FR+ PF G
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH----PGKE 284
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA + K
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDXXKKT 216
Query: 285 YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
N R+ ++ PE L D + Y + D+WS G +
Sbjct: 217 TNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 232
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G M + P
Sbjct: 233 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 170
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G M + P
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 150 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 206
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
+ S+ +HRD+ N M+D E+ +++ D+GLA EF + ++ ++
Sbjct: 207 FLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 266 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYM 170
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G M + P
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYM 170
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G M + P
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYM 197
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G M + P
Sbjct: 198 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ + N V +R +
Sbjct: 116 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLI-DEMANEFVGTRSYM 173
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEP 328
PE LQ YS+ D+WS+G M + P
Sbjct: 174 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYM 170
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G M + P
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++K L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYM 170
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G M + P
Sbjct: 171 SPE---RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 134 DDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXX----LQNLCGGP 189
+ + + RK+G G + E++ G + NE LQ G P
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGI 249
N V+ + D L+ + + F LS V +++ +++ HS+
Sbjct: 67 N-VRWFGVEGDYNVLVMDLLGPSLEDL-FNFCSRKLSLKTVLMLADQMINRVEFVHSKSF 124
Query: 250 MHRDVKPHNVMIDHEQR--KLRLIDWGLAEFY 279
+HRD+KP N ++ +R ++ +ID+GLA+ Y
Sbjct: 125 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPG 282
D+ Y+L + ++Y SQ +HRD+ NV++ E +++ D+GLA ++Y
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDYYK-- 214
Query: 283 KEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
N R+ ++ PE L D + Y + D+WS G +
Sbjct: 215 NTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLM 249
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 147
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
+ S+ +HRD+ N M+D E+ +++ D+GLA EF + ++ ++
Sbjct: 148 FLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 207 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 92 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 148
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
+ S+ +HRD+ N M+D E+ +++ D+GLA EF + ++ ++
Sbjct: 149 FLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 208 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 92 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 148
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
+ S+ +HRD+ N M+D E+ +++ D+GLA EF + ++ ++
Sbjct: 149 FLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 208 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 91 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 147
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
+ S+ +HRD+ N M+D E+ +++ D+GLA EF + ++ ++
Sbjct: 148 FLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 207 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 89 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 145
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
+ S+ +HRD+ N M+D E+ +++ D+GLA EF + ++ ++
Sbjct: 146 FLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 205 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR----------KLRLI--DWG 274
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 275 LAEFYHPGK-----EYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMFAGMIFR-K 326
L + G+ N + ++ PELL + + S+D++S+GC+F ++ + K
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 327 EPFFYGHDNYDQLVKIAK-VLGTDEL 351
PF D Y + I + + DE+
Sbjct: 252 HPF---GDKYSRESNIIRGIFSLDEM 274
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 96 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 152
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA------EFYHPGKEYNVRVASRYFKG 296
+ S+ +HRD+ N M+D E+ +++ D+GLA EF + ++ ++
Sbjct: 153 FLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L Q + D+WS G + ++ R P + + +D V
Sbjct: 212 ESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 253
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR----------KLRLI--DWG 274
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 275 LAEFYHPGK-----EYNVRVASRYFKGPELLVDL--QDYDYSLDLWSLGCMFAGMIFR-K 326
L + G+ N + ++ PELL + + S+D++S+GC+F ++ + K
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 327 EPFFYGHDNYDQLVKIAK-VLGTDEL 351
PF D Y + I + + DE+
Sbjct: 252 HPF---GDKYSRESNIIRGIFSLDEM 274
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLY------PTLSDYDVRYYIYELLKALD 242
PN++ LL I + +P ++ ++ + D + PT+ D + + ++ K +
Sbjct: 90 PNVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKD--LIGFGLQVAKGMK 146
Query: 243 YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELL 300
Y S+ +HRD+ N M+D E+ +++ D+GLA + + +V + ++ L
Sbjct: 147 YLASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 301 VDLQDYDYSL--DLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
LQ ++ D+WS G + ++ R P + + +D V
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 28/150 (18%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR----------KLRLI--DWG 274
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 275 LAEFYHPGKE-----YNVRVASRYFKGPELLVDLQDYDY------SLDLWSLGCMFAGMI 323
L + G+ N + ++ PELL + + S+D++S+GC+F ++
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 324 FR-KEPFFYGHDNYDQLVKIAK-VLGTDEL 351
+ K PF D Y + I + + DE+
Sbjct: 234 SKGKHPF---GDKYSRESNIIRGIFSLDEM 260
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK----LRLIDWGLAEFY 279
+LL ++Y HS+ +++RDVKP N +I + K + +ID+GLA+ Y
Sbjct: 105 QLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEY 152
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQL 339
+ PE + + Y + D+WS G IF E F G Y +
Sbjct: 232 LPVKWMAPESIFNCV-YTFESDVWSYG------IFLWELFSLGSSPYPGM 274
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 28/150 (18%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQR----------KLRLI--DWG 274
+Y+ + ++ + + HS I+HRD+KP N+++ R LR++ D+G
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 275 LAEFYHPGK-----EYNVRVASRYFKGPELLVDLQDYDY------SLDLWSLGCMFAGMI 323
L + G+ N + ++ PELL + + S+D++S+GC+F ++
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 324 FR-KEPFFYGHDNYDQLVKIAK-VLGTDEL 351
+ K PF D Y + I + + DE+
Sbjct: 234 SKGKHPF---GDKYSRESNIIRGIFSLDEM 260
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 233 YIYELLKALDYCHSQGI---MHRDVKPHNVMI-------DHEQRKLRLIDWGLAEFYHPG 282
+ ++ + ++Y H + I +HRD+K N++I D + L++ D+GLA +H
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-- 167
Query: 283 KEYNVRVASRY-FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ + A Y + PE ++ + D+WS G + ++ + PF
Sbjct: 168 RTTKMSAAGAYAWMAPE-VIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYE---------LLKA 240
NIVKL I + ++ LI E LY L + Y + E ++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGS---LYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 241 LDYCHSQGIMHRDVKPHNVM---IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
+++ GI+HR++KP N+M + Q +L D+G A +++ + + P
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHP 184
Query: 298 E------LLVDLQ-DYDYSLDLWSLGCMF 319
+ L D Q Y ++DLWS+G F
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 237 LLKALDYCHSQ-GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
+L+ L Y + IMHRDVKP N++++ + +++L D+G++ N V +R +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVN-SRGEIKLCDFGVSGQLI-DSMANSFVGTRSYM 180
Query: 296 GPELLVDLQDYDYSL--DLWSLGCMFAGMIFRKEPF 329
PE LQ YS+ D+WS+G + + P
Sbjct: 181 APE---RLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNY 336
+ PE + + Y + D+WS G IF E F G Y
Sbjct: 225 LPVKWMAPESIFNCV-YTFESDVWSYG------IFLWELFSLGSSPY 264
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNY 336
+ PE + + Y + D+WS G IF E F G Y
Sbjct: 209 LPVKWMAPESIFNCV-YTFESDVWSYG------IFLWELFSLGSSPY 248
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE----------- 284
++ +A+++ HS+G+MHRD+KP N+ + +++ D+GL +E
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 285 --YNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF 324
+ +V ++ + PE + Y + +D++SLG + +++
Sbjct: 185 ARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELLY 225
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE + V+ ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEFFKVKEPGESPIFW 183
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 184 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 237 IVFHLIEL 244
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYE---------LLKA 240
NIVKL I + ++ LI E LY L + Y + E ++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGS---LYTVLEEPSNAYGLPESEFLIVLRDVVGG 124
Query: 241 LDYCHSQGIMHRDVKPHNVMI---DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 297
+++ GI+HR++KP N+M + Q +L D+G A +++ + + P
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHP 184
Query: 298 E------LLVDLQ-DYDYSLDLWSLGCMF 319
+ L D Q Y ++DLWS+G F
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV-------- 287
++ +A+++ HS+G+MHRD+KP N+ + +++ D+GL +E
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 288 -----RVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIF 324
+V ++ + PE + +Y + +D++SLG + +++
Sbjct: 231 ATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELLY 271
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNY 336
+ PE + + Y + D+WS G IF E F G Y
Sbjct: 227 LPVKWMAPESIFNCV-YTFESDVWSYG------IFLWELFSLGSSPY 266
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
+ Y++ K + + S+ +HRD+ N+++ H R ++ D+GLA Y V+ +R
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTH-GRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNY 336
+ PE + + Y + D+WS G IF E F G Y
Sbjct: 232 LPVKWMAPESIFNCV-YTFESDVWSYG------IFLWELFSLGSSPY 271
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR 288
D+ + Y++ K +++ + +HRD+ NV++ H + +++ D+GLA Y VR
Sbjct: 173 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH-GKVVKICDFGLARDIMSDSNYVVR 231
Query: 289 VASRY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+R + PE L + Y D+WS G +
Sbjct: 232 GNARLPVKWMAPESLFE-GIYTIKSDVWSYGILL 264
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMI----DHEQRKLRLIDWGLAEFY 279
+L+ ++Y HS+ +++RDVKP N +I + Q+ + +ID+GLA+ Y
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEY 160
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 125
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HR++ N+++++E R +++ D+GL + KE Y V+ ++
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENR-VKIGDFGLTKVLPQDKEYYKVKEPGESPIFW 184
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 185 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 237
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 238 IVFHLIEL 245
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 20/114 (17%)
Query: 230 VRYYIYELLKALDYCHSQG--IMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV 287
+R + ++LK L + H++ I+HRD+K N+ I +++ D GLA V
Sbjct: 131 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 190
Query: 288 RVASRYFKGPELLVDLQDYDYSLDLWSLG---------------CMFAGMIFRK 326
+ + F PE + YD S+D+++ G C A I+R+
Sbjct: 191 -IGTPEFXAPEXYE--EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRR 241
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 218 FKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE 277
F + TLS D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA
Sbjct: 154 FAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLAR 212
Query: 278 FYHPGKEYNVRVASRY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
Y V+ +R + PE + D Y D+WS G +
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 256
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 202 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 254
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 255 IVFHLIEL 262
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 131
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 190
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + + D+WS G + E F Y + + +++G D+
Sbjct: 191 YAPESLTESK-FSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 243
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 244 IVFHLIEL 251
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 214
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 215 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 267
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 268 IVFHLIEL 275
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 249 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 277
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 203 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 231
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 254
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 255 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 283
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 184 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 237 IVFHLIEL 244
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 201
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 202 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 254
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 255 IVFHLIEL 262
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 203 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 231
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 256
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 257 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 285
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 129
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 188
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + + D+WS G + E F Y + + +++G D+
Sbjct: 189 YAPESLTESK-FSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 241
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 242 IVFHLIEL 249
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 130
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 189
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 190 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 242
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 243 IVFHLIEL 250
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 128
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 187
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 188 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 240
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 241 IVFHLIEL 248
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 183
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 184 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 237 IVFHLIEL 244
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 261
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 262 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 290
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 197 IVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKP 256
+ + +++ L+ E + + + D + LL++L QG H DV+P
Sbjct: 308 LAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRP 367
Query: 257 HNVMIDHEQRKLRLIDWG 274
NVM+D Q RLID+G
Sbjct: 368 WNVMVDARQHA-RLIDFG 384
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 127
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 186
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + + D+WS G + E F Y + + +++G D+
Sbjct: 187 YAPESLTESK-FSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 239
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 240 IVFHLIEL 247
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 122
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 181
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 182 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 234
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 235 IVFHLIEL 242
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 197 IVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKP 256
+ + +++ L+ E + + + D + LL++L QG H DV+P
Sbjct: 308 LAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRP 367
Query: 257 HNVMIDHEQRKLRLIDWG 274
NVM+D Q RLID+G
Sbjct: 368 WNVMVDARQHA-RLIDFG 384
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 263
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 264 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 292
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 240
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 214 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 242
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 30/188 (15%)
Query: 190 NIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRY-----------YIYELL 238
NIVK + + LI E++ Y +L DY ++ Y ++
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLP-------YGSLRDYLQKHKERIDHIKLLQYTSQIC 123
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASR---YF 294
K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+ ++
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 295 KGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELNAY 354
PE L + + + D+WS G + E F Y + + +++G D+
Sbjct: 183 YAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGNDKQGQM 235
Query: 355 LNKYHIEL 362
+ + IEL
Sbjct: 236 IVFHLIEL 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 208 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + +Y + +R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 208 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 236
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 243 YCHSQG----IMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK---EYNVRVASRYFK 295
+C +G I HRD K NV++ + + L D+GLA + PGK + + +V +R +
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 296 GPELL---VDLQ-DYDYSLDLWSLGCMFAGMIFR 325
PE+L ++ Q D +D++++G + ++ R
Sbjct: 193 APEVLEGAINFQRDAFLRIDMYAMGLVLWELVSR 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVAS 291
Y ++ K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 292 R---YFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ PE L + + + D+WS G + E F Y + + +++G
Sbjct: 181 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGN 233
Query: 349 DELNAYLNKYHIEL 362
D+ + + IEL
Sbjct: 234 DKQGQMIVFHLIEL 247
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVAS 291
Y ++ K ++Y ++ +HRD+ N+++++E R +++ D+GL + KE V+
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENR-VKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 292 R---YFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGT 348
++ PE L + + + D+WS G + E F Y + + +++G
Sbjct: 181 ESPIFWYAPESLTE-SKFSVASDVWSFGVVLY------ELFTYIEKSKSPPAEFMRMIGN 233
Query: 349 DELNAYLNKYHIEL 362
D+ + + IEL
Sbjct: 234 DKQGQMIVFHLIEL 247
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDH----EQRKLRLIDWGLAEFY 279
+L+ ++Y H++ +++RDVKP N ++ Q + +ID+GLA+ Y
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEY 155
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 201 QQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVM 260
Q+ K+ S + E ++ F T+ D + Y +++ + +++ S+ +HRD+ N++
Sbjct: 174 QEDKSLSDVEEEEDSDGFYKEPITMED--LISYSFQVARGMEFLSSRKCIHRDLAARNIL 231
Query: 261 IDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQDYDYSLDLWSLGC 317
+ E +++ D+GLA + +Y + +R + PE + D + Y D+WS G
Sbjct: 232 L-SENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFD-KIYSTKSDVWSYGV 289
Query: 318 MF 319
+
Sbjct: 290 LL 291
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GLA P Y R + R+
Sbjct: 161 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV----R 288
Y ++ K ++Y S+ +HRD+ N++++ E +++ D+GLA+ K+Y V
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPG 177
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
+ ++ PE L D + D+WS G +
Sbjct: 178 QSPIFWYAPESLSD-NIFSRQSDVWSFGVVL 207
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV----R 288
Y ++ K ++Y S+ +HRD+ N++++ E +++ D+GLA+ K+Y V
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPG 190
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLG 316
+ ++ PE L D + D+WS G
Sbjct: 191 QSPIFWYAPESLSD-NIFSRQSDVWSFG 217
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV----R 288
Y ++ K ++Y S+ +HRD+ N++++ E +++ D+GLA+ K+Y V
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPG 178
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLG 316
+ ++ PE L D + D+WS G
Sbjct: 179 QSPIFWYAPESLSD-NIFSRQSDVWSFG 205
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMI----DHEQRKLRLIDWGLAEFY 279
+L+ ++Y HS+ +++RDVKP N +I + Q+ + +ID+ LA+ Y
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMI----DHEQRKLRLIDWGLAEFY 279
+L+ ++Y HS+ +++RDVKP N +I + Q+ + +ID+ LA+ Y
Sbjct: 134 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 181
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLY-----PTLSDYDVRYYIYELLKALD 242
PNIVKL + L+ E+ + VL+ P + + + + +
Sbjct: 62 PNIVKLYGACLNPVC----LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 243 YCHS---QGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y HS + ++HRD+KP N+++ L++ D+G A N A+ + PE+
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPEV 175
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +Y D++S G + +I R++PF
Sbjct: 176 F-EGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V + + ++ E++ N L +D ++ I +L+ +
Sbjct: 110 PNIIRLEGVV--TRGRLAMIVTEYMENGSLDTF---LRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNV---RVASRYFKG 296
Y G +HRD+ NV++D ++ D+GL+ P Y ++ R+
Sbjct: 165 RYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW-TA 222
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
PE + + + + D+WS G + ++ E ++ N D + +
Sbjct: 223 PEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKV-LY----PTLS-DYDVRYYI-YE 236
+ C P++V L+ ++ LI++++ N + K LY PT+S ++ R I
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMI--LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE 277
+ L Y H++ I+HRDVK N+++D E ++ D+G+++
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISK 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 184 NLCGGPNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKV-LY----PTLS-DYDVRYYI-YE 236
+ C P++V L+ ++ LI++++ N + K LY PT+S ++ R I
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMI--LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE 277
+ L Y H++ I+HRDVK N+++D E ++ D+G+++
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLD-ENFVPKITDFGISK 187
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLY-----PTLSDYDVRYYIYELLKALD 242
PNIVKL + L+ E+ + VL+ P + + + + +
Sbjct: 61 PNIVKLYGACLNPVC----LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 243 YCHS---QGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 299
Y HS + ++HRD+KP N+++ L++ D+G A N A+ + PE+
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA--WMAPEV 174
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
+ +Y D++S G + +I R++PF
Sbjct: 175 F-EGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 23/132 (17%)
Query: 219 KVLYPTLSDYDV-------RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLI 271
+ LY + D + R E++K + Y H++GI+H+D+K NV D+ K+ +
Sbjct: 114 RTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG--KVVIT 171
Query: 272 DWGL---AEFYHPG-KEYNVRVASRYF--KGPELLVDLQ--------DYDYSLDLWSLGC 317
D+GL + G +E +R+ + + PE++ L + D+++LG
Sbjct: 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 318 MFAGMIFRKEPF 329
++ + R+ PF
Sbjct: 232 IWYELHAREWPF 243
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK---EYNVRV 289
Y++E + L H I HRD+K NV++ + + D+GLA + GK + + +V
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQV 194
Query: 290 ASRYFKGPELL---VDLQ-DYDYSLDLWSLGCMF 319
+R + PE+L ++ Q D +D++++G +
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL 228
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 161 KYLSDMGFVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 218 FKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE 277
F + T S D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLAR 212
Query: 278 FYHPGKEYNVRVASRY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
Y V+ +R + PE + D Y D+WS G +
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 256
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 191 IVKLLDI-VRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+V+LL + R+ + + N D+ + +S + Y ++ A++Y +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 304
+HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA-YN 187
Query: 305 DYDYSLDLWSLGCMF 319
+ D+W+ G +
Sbjct: 188 KFSIKSDVWAFGVLL 202
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 77 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 131
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I + ++ D+GL+ P Y R + R+
Sbjct: 132 KYLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 189
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 190 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 197 IVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKP 256
+ + +++ L+ E + + + D + LL++L +G H DV+P
Sbjct: 308 LAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKKGFWHDDVRP 367
Query: 257 HNVMIDHEQRKLRLIDWG 274
NVM+D Q RLID+G
Sbjct: 368 WNVMVDARQHA-RLIDFG 384
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 94 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 148
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I + ++ D+GL+ P Y R + R+
Sbjct: 149 KYLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 206
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 207 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 246
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 71 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 180 APESLA-YNKFSIKSDVWAFGVLL 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
L+ D+ + +++ + + Y ++HRD+ N+++ E RK+++ D+GL+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEED 204
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSL--DLWSLGCMF 319
Y R R + L D+ Y+ D+WS G +
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 191 IVKLLDI-VRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+V+LL + R+ + + N D+ + +S + Y ++ A++Y +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 304
+HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 131 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA-YN 187
Query: 305 DYDYSLDLWSLGCMF 319
+ D+W+ G +
Sbjct: 188 KFSIKSDVWAFGVLL 202
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ +A++Y S+ +HRD+ N +++ +Q +++ D+GL+ Y EY V S++
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 185
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE+L+ + D+W+ G +
Sbjct: 186 RWSPPEVLM-YSKFSSKSDIWAFGVLM 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 191 IVKLLDI-VRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+V+LL + R+ + + N D+ + +S + Y ++ A++Y +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 304
+HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 136 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA-YN 192
Query: 305 DYDYSLDLWSLGCMF 319
+ D+W+ G +
Sbjct: 193 KFSIKSDVWAFGVLL 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ +A++Y S+ +HRD+ N +++ +Q +++ D+GL+ Y EY V S++
Sbjct: 108 DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 165
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE+L+ + D+W+ G +
Sbjct: 166 RWSPPEVLM-YSKFSSKSDIWAFGVLM 191
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 74
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 75 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 126 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 183
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 184 APESLA-YNKFSIKSDVWAFGVLL 206
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 71 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 179
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 180 APESLA-YNKFSIKSDVWAFGVLL 202
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 76 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 184
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 185 APESLA-YNKFSIKSDVWAFGVLL 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ +A++Y S+ +HRD+ N +++ +Q +++ D+GL+ Y EY V S++
Sbjct: 112 DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 169
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE+L+ + D+W+ G +
Sbjct: 170 RWSPPEVLM-YSKFSSKSDIWAFGVLM 195
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 73 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 181
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 182 APESLA-YNKFSIKSDVWAFGVLL 204
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEY 285
+++ ++Y HS+ +HRDVKP N ++ ++ + +ID+GLA+ Y + +
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ +A++Y S+ +HRD+ N +++ +Q +++ D+GL+ Y EY V S++
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 170
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE+L+ + D+W+ G +
Sbjct: 171 RWSPPEVLM-YSKFSSKSDIWAFGVLM 196
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 161 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 161 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ +A++Y S+ +HRD+ N +++ +Q +++ D+GL+ Y EY V S++
Sbjct: 119 DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPV 176
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE+L+ + D+W+ G +
Sbjct: 177 RWSPPEVLM-YSKFSSKSDIWAFGVLM 202
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 161 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEY 285
+++ ++Y HS+ +HRDVKP N ++ ++ + +ID+GLA+ Y + +
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 24 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 83
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 84 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 134
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 135 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIKWT 192
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 193 APESLA-YNKFSIKSDVWAFGVLL 215
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 76 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 184
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 185 APESLA-YNKFSIKSDVWAFGVLL 207
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK--LRLIDWGLAEFYHPGKEY 285
+++ ++Y HS+ +HRDVKP N ++ ++ + +ID+GLA+ Y + +
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 73 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 181
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 182 APESLA-YNKFSIKSDVWAFGVLL 204
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 194 LLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRD 253
LLD +R + F N+T TLS + ++ ++ + +DY + +HRD
Sbjct: 113 LLDFLRKSRVLETDPAFAIANSTA-----STLSSQQLLHFAADVARGMDYLSQKQFIHRD 167
Query: 254 VKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL--- 310
+ N+++ E ++ D+GL+ G+E V V + P + ++ +YS+
Sbjct: 168 LAARNILVG-ENYVAKIADFGLSR----GQE--VYVKKTMGRLPVRWMAIESLNYSVYTT 220
Query: 311 --DLWSLGCMF 319
D+WS G +
Sbjct: 221 NSDVWSYGVLL 231
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 161 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFF 330
PE + + + + D+WS G ++ M + + P++
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 194 LLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRD 253
LLD +R + F N+T TLS + ++ ++ + +DY + +HRD
Sbjct: 103 LLDFLRKSRVLETDPAFAIANSTA-----STLSSQQLLHFAADVARGMDYLSQKQFIHRD 157
Query: 254 VKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL--- 310
+ N+++ E ++ D+GL+ G+E V V + P + ++ +YS+
Sbjct: 158 LAARNILVG-ENYVAKIADFGLSR----GQE--VYVKKTMGRLPVRWMAIESLNYSVYTT 210
Query: 311 --DLWSLGCMF 319
D+WS G +
Sbjct: 211 NSDVWSYGVLL 221
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 104 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 158
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 159 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 216
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 217 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 256
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E + N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 161 KYLSDMGAVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 208 LIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRK 267
L+ + F + TL VR+ + ++ ++Y S+ +HRD+ N M+ E
Sbjct: 122 LLASRIGENPFNLPLQTL----VRFMV-DIACGMEYLSSRNFIHRDLAARNCML-AEDMT 175
Query: 268 LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL--DLWSLGCMFAGMIFR 325
+ + D+GL+ + G Y AS+ L L D Y++ D+W+ G ++ R
Sbjct: 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
Query: 326 KEPFFYGHDNYD 337
+ + G +N +
Sbjct: 236 GQTPYAGIENAE 247
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E++ N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL P Y R + R+
Sbjct: 161 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E + N L +D ++ + +L+ +
Sbjct: 77 PNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 131
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I + ++ D+GL+ P Y R + R+
Sbjct: 132 KYLSDMGYVHRDLAARNILI-NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 189
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 190 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 191 IVKLLDIVRDQQSKTPS--LIFEHV---NNTDF--KVLYPTLSDYDVRYYIYELLKALDY 243
+V+LL + ++ P +I E + N D+ + +S + Y ++ A++Y
Sbjct: 71 LVQLLGVC----TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELL 300
+ +HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 127 LEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 184
Query: 301 VDLQDYDYSLDLWSLGCMF 319
+ D+W+ G +
Sbjct: 185 A-YNKFSIKSDVWAFGVLL 202
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 72 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 123 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRL-MTGDTYTAPAGAKFPIKWT 180
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 181 APESLA-YNKFSIKSDVWAFGVLL 203
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 13 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 72
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 73 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 124 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWT 181
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 182 APESLA-YNKFSIKSDVWAFGVLL 204
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAE--FYHPG--KEYNVR 288
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + P ++ + R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
+ ++ PE + D + Y D+WS G +
Sbjct: 212 LPLKWM-APETIFD-RVYTIQSDVWSFGVLL 240
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 70
Query: 191 IVKLLDIVRDQQSKTPS--LIFEHV---NNTDF--KVLYPTLSDYDVRYYIYELLKALDY 243
+V+LL + ++ P +I E + N D+ + +S + Y ++ A++Y
Sbjct: 71 LVQLLGVC----TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELL 300
+ +HRD+ N ++ E +++ D+GL+ G Y +++ + PE L
Sbjct: 127 LEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESL 184
Query: 301 VDLQDYDYSLDLWSLGCMF 319
+ D+W+ G +
Sbjct: 185 A-YNKFSIKSDVWAFGVLL 202
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 277
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 278 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HR++ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 386
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 387 APESLA-YNKFSIKSDVWAFGVLL 409
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 257 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 316
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 317 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HR++ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 425
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 426 APESLA-YNKFSIKSDVWAFGVLL 448
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V +SK ++ E + N L +D ++ + +L+ +
Sbjct: 106 PNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF---LRKHDAQFTVIQLVGMLRGIASGM 160
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVR---VASRYFKG 296
Y G +HRD+ N++I+ ++ D+GL+ P Y R + R+
Sbjct: 161 KYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
PE + + + + D+WS G + ++ E ++ N D
Sbjct: 219 PEAIA-YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNV----R 288
Y ++ K ++Y S+ +HRD+ N++++ E +++ D+GLA+ K+ V
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPG 174
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLG 316
+ ++ PE L D + D+WS G
Sbjct: 175 QSPIFWYAPESLSD-NIFSRQSDVWSFG 201
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 191 IVKLLDIVRDQQSKTPS--LIFEHVNNTDFKVLYPTLSDY------------DVRYYIYE 236
+V+LL + ++ P +I E + Y L DY + Y +
Sbjct: 76 LVQLLGVC----TREPPFYIIIEFMT-------YGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY--- 293
+ A++Y + +HRD+ N ++ E +++ D+GL+ G Y +++
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIK 182
Query: 294 FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE L + D+W+ G +
Sbjct: 183 WTAPESLA-YNKFSIKSDVWAFGVLL 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 191 IVKLLDI-VRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+V+LL + R+ + + N D+ + +S + Y ++ A++Y +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FKGPELLVDLQ 304
+HRD+ N ++ E +++ D+GL+ G + +++ + PE L
Sbjct: 129 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLA-YN 185
Query: 305 DYDYSLDLWSLGCMF 319
+ D+W+ G +
Sbjct: 186 KFSIKSDVWAFGVLL 200
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 28/204 (13%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 215 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 274
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 275 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY---FK 295
A++Y + +HR++ N ++ E +++ D+GL+ G Y +++ +
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVG-ENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWT 383
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 384 APESLA-YNKFSIKSDVWAFGVLL 406
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI++L +V + + ++ E++ N L +D ++ I +L+ +
Sbjct: 110 PNIIRLEGVV--TRGRLAMIVTEYMENGSLDTF---LRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGL---------AEFYHPGKEYNVRVASR 292
Y G +HRD+ NV++D ++ D+GL A G + +R
Sbjct: 165 RYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR---- 219
Query: 293 YFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKI 342
+ PE + + + + D+WS G + ++ E ++ N D + +
Sbjct: 220 -WTAPEAIA-FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTD-FKVLYPT-----LSDYDVRYYIYELLKALD 242
PNIV + V Q S++ E+++ +++L+ + L + Y++ K ++
Sbjct: 94 PNIVLFMGAV--TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 243 YCHSQG--IMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVA-SRYFKGPEL 299
Y H++ I+HRD+K N+++D ++ +++ D+GL+ + A + + PE+
Sbjct: 152 YLHNRNPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV 210
Query: 300 LVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLV 340
L D + S D++S G + + ++P +G+ N Q+V
Sbjct: 211 LRDEPSNEKS-DVYSFGVILWELATLQQP--WGNLNPAQVV 248
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 203 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 231
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + + +R
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 203 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 231
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 52/138 (37%)
Query: 230 VRYYIYELLKALDYCHSQG-IMHRDVKPHNVMI--------------------------- 261
V+ I ++L+ LDY H++ I+H D+KP N+++
Sbjct: 132 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 191
Query: 262 ---------------------DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
+ E+ K+++ D G A + H K + + +R ++ E+L
Sbjct: 192 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH--KHFTEDIQTRQYRSLEVL 249
Query: 301 VDLQDYDYSLDLWSLGCM 318
+ Y+ D+WS CM
Sbjct: 250 IG-SGYNTPADIWSTACM 266
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
LS D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSN 221
Query: 285 YNVRVASRY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
Y V+ +R + PE + D Y D+WS G +
Sbjct: 222 YIVKGNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 258
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 240
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 52/138 (37%)
Query: 230 VRYYIYELLKALDYCHSQG-IMHRDVKPHNVMI--------------------------- 261
V+ I ++L+ LDY H++ I+H D+KP N+++
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 207
Query: 262 ---------------------DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELL 300
+ E+ K+++ D G A + H K + + +R ++ E+L
Sbjct: 208 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH--KHFTEDIQTRQYRSLEVL 265
Query: 301 VDLQDYDYSLDLWSLGCM 318
+ Y+ D+WS CM
Sbjct: 266 IG-SGYNTPADIWSTACM 282
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 240
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
Y +++ K +++ S+ +HRD+ N+++ E+ +++ D+GLA + + +R
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 293 Y---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE + D + Y D+WS G +
Sbjct: 212 LPLKWMAPETIFD-RVYTIQSDVWSFGVLL 240
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNV---R 288
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+ +
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
V ++ +L + Y + D+WS G ++ M F +P+
Sbjct: 215 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 194 LLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRD 253
LLD +R + F N+T TLS + ++ ++ + +DY + +HR+
Sbjct: 110 LLDFLRKSRVLETDPAFAIANSTA-----STLSSQQLLHFAADVARGMDYLSQKQFIHRN 164
Query: 254 VKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL--- 310
+ N+++ E ++ D+GL+ G+E V V + P + ++ +YS+
Sbjct: 165 LAARNILVG-ENYVAKIADFGLSR----GQE--VYVKKTMGRLPVRWMAIESLNYSVYTT 217
Query: 311 --DLWSLGCMF 319
D+WS G +
Sbjct: 218 NSDVWSYGVLL 228
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 32/163 (19%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG----PNI 191
Y+V R++G G + +FEG + +N+ L G PN+
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71
Query: 192 VKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY-----------DVRYYIYELLKA 240
Q+ L+ + +L P+L D V ++L
Sbjct: 72 YYF-----GQEGLHNVLVID--------LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLAR 118
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRK----LRLIDWGLAEFY 279
+ H + +++RD+KP N +I K + ++D+G+ +FY
Sbjct: 119 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 123 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 36/208 (17%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 16 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 75
Query: 191 IVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY------------DVRYYIYELL 238
+V+LL + + P I T+F + Y L DY + Y ++
Sbjct: 76 LVQLLGVCTRE---PPFYII-----TEF-MTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 239 KALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVRVAS 291
A++Y + +HRD+ N ++ E +++ D+GL+ H G ++ ++
Sbjct: 127 SAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--- 182
Query: 292 RYFKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE L + D+W+ G +
Sbjct: 183 --WTAPESLA-YNKFSIKSDVWAFGVLL 207
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 32/163 (19%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGG----PNI 191
Y+V R++G G + +FEG + +N+ L G PN+
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 70
Query: 192 VKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDY-----------DVRYYIYELLKA 240
Q+ L+ + +L P+L D V ++L
Sbjct: 71 YYF-----GQEGLHNVLVID--------LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLAR 117
Query: 241 LDYCHSQGIMHRDVKPHNVMIDHEQRK----LRLIDWGLAEFY 279
+ H + +++RD+KP N +I K + ++D+G+ +FY
Sbjct: 118 VQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 160
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 18/160 (11%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PNI+ L +V +SK ++ E++ N L D ++ + +L+ +
Sbjct: 83 PNIIHLEGVV--TKSKPVMIVTEYMENGSLDTF---LKKNDGQFTVIQLVGMLRGISAGM 137
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNVRVASRYFK--GP 297
Y G +HRD+ N++I+ ++ D+GL+ P Y R + P
Sbjct: 138 KYLSDMGYVHRDLAARNILINS-NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 298 ELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD 337
E + + + + D+WS G + ++ E ++ N D
Sbjct: 197 EAIA-FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD 235
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
L+ D+ + +++ + + Y ++HRD+ N+++ E RK+++ D+GL+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEED 204
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSL--DLWSLGCMF 319
R R + L D+ Y+ D+WS G +
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ +A++Y S+ +HRD+ N +++ +Q +++ D+GL+ + +E + V S++
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEETS-SVGSKFPV 185
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE+L+ + D+W+ G +
Sbjct: 186 RWSPPEVLM-YSKFSSKSDIWAFGVLM 211
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 224 TLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK 283
L+ D+ + +++ + + Y ++HRD+ N+++ E RK+++ D+GL+ +
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEED 204
Query: 284 EYNVRVASRYFKGPELLVDLQDYDYSL--DLWSLGCMF 319
R R + L D+ Y+ D+WS G +
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 82/203 (40%), Gaps = 26/203 (12%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 9 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 191 IVKLLDIVRDQQSKTPS--LIFEHV---NNTDF--KVLYPTLSDYDVRYYIYELLKALDY 243
+V+LL + ++ P +I E + N D+ + +S + Y ++ A++Y
Sbjct: 69 LVQLLGVC----TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 244 CHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVRVASRYFKG 296
+ +HRD+ N ++ E +++ D+GL+ H G ++ ++ +
Sbjct: 125 LEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-----WTA 178
Query: 297 PELLVDLQDYDYSLDLWSLGCMF 319
PE L + D+W+ G +
Sbjct: 179 PESLA-YNKFSIKSDVWAFGVLL 200
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ +A++Y S+ +HRD+ N +++ +Q +++ D+GL+ Y EY S++
Sbjct: 113 DVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPV 170
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE+L+ + D+W+ G +
Sbjct: 171 RWSPPEVLM-YSKFSSKSDIWAFGVLM 196
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 189 PNIVKLLDIVRDQQSK---TPSLIFEHVNNTDFK--VLYPTLSDYDVRYYIYELLK---- 239
PN+++LL + + S+ P +I + D +LY L + LLK
Sbjct: 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD 155
Query: 240 ---ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY-NVRVASRYFK 295
++Y ++ +HRD+ N M+ + + + D+GL++ + G Y R+A K
Sbjct: 156 IALGMEYLSNRNFLHRDLAARNCML-RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 296 --GPELLVDLQDYDYSLDLWSLGCMFAGMIFRKE---PFFYGHDNYDQLV 340
E L D + Y D+W+ G + R P H+ YD L+
Sbjct: 215 WIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL 263
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 18/199 (9%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G++ EV+EGV + + PN
Sbjct: 9 ERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 68
Query: 191 IVKLLDI-VRDQQSKTPSLIFEHVNNTDF--KVLYPTLSDYDVRYYIYELLKALDYCHSQ 247
+V+LL + R+ + + N D+ + +S + Y ++ A++Y +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 248 GIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVRVASRYFKGPELL 300
+HRD+ N ++ E +++ D+GL+ H G ++ ++ + PE L
Sbjct: 129 NFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK-----WTAPESL 182
Query: 301 VDLQDYDYSLDLWSLGCMF 319
+ D+W+ G +
Sbjct: 183 A-YNKFSIKSDVWAFGVLL 200
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 40/210 (19%)
Query: 132 EQDDYEVVRKVGRGKYSEVFEGVHCTDN-EXXXXXXXXXXXXXXXXXXXXXLQNLCGGPN 190
E+ D + K+G G+Y EV+EGV + + PN
Sbjct: 12 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN 71
Query: 191 IVKLLDIVRDQQSKTPS--LIFEHVNNTDFKVLYPTLSDY------------DVRYYIYE 236
+V+LL + ++ P +I E + Y L DY + Y +
Sbjct: 72 LVQLLGVC----TREPPFYIIIEFMT-------YGNLLDYLRECNRQEVNAVVLLYMATQ 120
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVRV 289
+ A++Y + +HRD+ N ++ E +++ D+GL+ H G ++ ++
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK- 178
Query: 290 ASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE L + D+W+ G +
Sbjct: 179 ----WTAPESLA-YNKFSIKSDVWAFGVLL 203
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 251 HRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK--EYNVRVASRYFKGPELLVDLQDYDY 308
HRDVKP N+++ + L+D+G+A K + V + Y+ PE + Y
Sbjct: 157 HRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESH-ATY 214
Query: 309 SLDLWSLGCMFAGMIFRKEPF 329
D+++L C+ + P+
Sbjct: 215 RADIYALTCVLYECLTGSPPY 235
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPG-KEYNVRVAS 291
+ ++ K + Y + ++HRD+ NV++ +++ D+GLA KEYN
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGK 203
Query: 292 RYFKGPEL-LVDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
K L + + + + D+WS G ++ M F +P+
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ + ++Y + ++HRD+ NV++ Q +++ D+GLA+ KEY+
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR 288
D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVK 217
Query: 289 VASRY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+R + PE + D Y D+WS G +
Sbjct: 218 GNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 250
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 103/292 (35%), Gaps = 94/292 (32%)
Query: 136 YEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIVKLL 195
Y V+RK+G G +S V+ C D + + +KLL
Sbjct: 33 YHVIRKLGWGHFSTVWL---CWDMQGKRFVAMKVVKSAQHYTETALDE--------IKLL 81
Query: 196 DIVRDQQSKTPS----------------------LIFE----HVNNTDFKVLYPTLSDYD 229
VR+ P+ ++FE H+ K Y L
Sbjct: 82 KCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRC 141
Query: 230 VRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMI--------------------------- 261
V+ I ++L+ LDY HS+ I+H D+KP N+++
Sbjct: 142 VKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSG 201
Query: 262 -------------------DHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVD 302
+ ++ ++++ D G A + H K + + +R ++ E+L+
Sbjct: 202 SAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVH--KHFTEDIQTRQYRSIEVLIG 259
Query: 303 LQDYDYSLDLWSLGCM---FAGMIFRKEPFFYGHD---NYDQLVKIAKVLGT 348
Y D+WS CM A + EP G D + D + I ++LG+
Sbjct: 260 -AGYSTPADIWSTACMAFELATGDYLFEP-HSGEDYSRDEDHIAHIIELLGS 309
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR 288
D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVK 211
Query: 289 VASRY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+R + PE + D Y D+WS G +
Sbjct: 212 GNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 244
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 232 YYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVAS 291
Y ++ A++Y + +HRD+ N ++ E +++ D+GL+ G Y +
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHVVKVADFGLSRLM-TGDTYTAHAGA 191
Query: 292 RY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
++ + PE L + D+W+ G +
Sbjct: 192 KFPIKWTAPESLA-YNTFSIKSDVWAFGVLL 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPG-KEYNVRVAS 291
+ ++ K + Y + ++HRD+ NV++ +++ D+GLA KEYN
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGK 180
Query: 292 RYFKGPEL-LVDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
K L + + + + D+WS G ++ M F +P+
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTD---FKVLYPTLSDY----------------D 229
PN+V LL +V Q S+IF + ++ D F V+ SD D
Sbjct: 72 PNVVCLLGVVTKDQPL--SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY---- 285
+ + ++ ++Y S ++H+D+ NV++ +++ +++ D GL + Y
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 286 NVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD--QLVKIA 343
N + R+ PE ++ + D+WS G + + + G+ N D ++++
Sbjct: 189 NSLLPIRWM-APEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 246
Query: 344 KVLGT-DELNAYLNKYHIE 361
+VL D+ A++ IE
Sbjct: 247 QVLPCPDDCPAWVYALMIE 265
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTD---FKVLYPTLSDY----------------D 229
PN+V LL +V Q S+IF + ++ D F V+ SD D
Sbjct: 89 PNVVCLLGVVTKDQPL--SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 230 VRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEY---- 285
+ + ++ ++Y S ++H+D+ NV++ +++ +++ D GL + Y
Sbjct: 147 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 286 NVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYD--QLVKIA 343
N + R+ PE ++ + D+WS G + + + G+ N D ++++
Sbjct: 206 NSLLPIRWM-APEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR 263
Query: 344 KVLGT-DELNAYLNKYHIE 361
+VL D+ A++ IE
Sbjct: 264 QVLPCPDDCPAWVYALMIE 282
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 229 DVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVR 288
D+ ++ ++ + + + S+ +HRDV NV++ + ++ D+GLA Y V+
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVK 219
Query: 289 VASRY---FKGPELLVDLQDYDYSLDLWSLGCMF 319
+R + PE + D Y D+WS G +
Sbjct: 220 GNARLPVKWMAPESIFDCV-YTVQSDVWSYGILL 252
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+G A+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+G A+ KEY+
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+G A+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+G A+ KEY+
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 428
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 429 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVAS 291
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+G A+ KEY+
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 292 RYFKGPELLVDLQD-YDYSLDLWSLGC-MFAGMIFRKEPF 329
K L L Y + D+WS G ++ M F +P+
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNV---R 288
+ ++ K ++Y + ++HRD+ NV++ Q +++ D+G A+ KEY+ +
Sbjct: 126 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
V ++ +L + Y + D+WS G ++ M F +P+
Sbjct: 185 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 346 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 346 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 345
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 346 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 176
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 177 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVR 288
++ + + Y ++HRD+ N ++ E + +++ D+G+ F G ++ V+
Sbjct: 111 DVCEGMAYLEEASVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
AS PE+ Y D+WS G +
Sbjct: 170 WAS-----PEVF-SFSRYSSKSDVWSFGVLM 194
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 172
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 173 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 168
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 169 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 170
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 171 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVASRYF 294
++ K + Y G++HR++ NV++ ++++ D+G+A+ P K+ A
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 295 KGPEL-LVDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
K L + Y + D+WS G ++ M F EP+
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA EY R +++
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEYTARQGAKFPI 179
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 180 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHP-GKEYNVRVASRYF 294
++ K + Y G++HR++ NV++ ++++ D+G+A+ P K+ A
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLK-SPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 295 KGPEL-LVDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
K L + Y + D+WS G ++ M F EP+
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 236
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQ-RKLRLIDWGLAEFYHP 281
+L L+Y H +H D+K N++++++ ++ L+D+GLA Y P
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQ-RKLRLIDWGLAEFYHP 281
+L L+Y H +H D+K N++++++ ++ L+D+GLA Y P
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PE 298
D+C + I+HRDVK N+++D E + + D+GLA+ K+ +V A R G PE
Sbjct: 149 DHCDPK-IIHRDVKAANILLDEEFEAV-VGDFGLAKLMDY-KDXHVXXAVRGXIGHIAPE 205
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
L + + + D++ G M +I + F
Sbjct: 206 YLSTGKSSEKT-DVFGYGVMLLELITGQRAF 235
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQ-RKLRLIDWGLAEFYHP 281
+L L+Y H +H D+K N++++++ ++ L+D+GLA Y P
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVR 288
++ + + Y ++HRD+ N ++ E + +++ D+G+ F G ++ V+
Sbjct: 111 DVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
AS PE+ Y D+WS G +
Sbjct: 170 WAS-----PEVF-SFSRYSSKSDVWSFGVLM 194
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVR 288
++ + + Y ++HRD+ N ++ E + +++ D+G+ F G ++ V+
Sbjct: 109 DVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 167
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
AS PE+ Y D+WS G +
Sbjct: 168 WAS-----PEVF-SFSRYSSKSDVWSFGVLM 192
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GL EY R +++
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLGRLIE-DNEYTARQGAKFPI 346
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 347 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVR 288
++ + + Y ++HRD+ N ++ E + +++ D+G+ F G ++ V+
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 170
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
AS PE+ Y D+WS G +
Sbjct: 171 WAS-----PEVF-SFSRYSSKSDVWSFGVLM 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVR 288
++ + + Y ++HRD+ N ++ E + +++ D+G+ F G ++ V+
Sbjct: 114 DVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 172
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
AS PE+ Y D+WS G +
Sbjct: 173 WAS-----PEVF-SFSRYSSKSDVWSFGVLM 197
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFY-------HPGKEYNVR 288
++ + + Y ++HRD+ N ++ E + +++ D+G+ F G ++ V+
Sbjct: 131 DVCEGMAYLEEACVIHRDLAARNCLVG-ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 189
Query: 289 VASRYFKGPELLVDLQDYDYSLDLWSLGCMF 319
AS PE+ Y D+WS G +
Sbjct: 190 WAS-----PEVF-SFSRYSSKSDVWSFGVLM 214
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG---PE 298
D+C + I+HRDVK N+++D E + + D+GLA+ K+ +V A R G PE
Sbjct: 157 DHCDPK-IIHRDVKAANILLDEEFEAV-VGDFGLAKLMDY-KDXHVXXAVRGTIGHIAPE 213
Query: 299 LLVDLQDYDYSLDLWSLGCMFAGMIFRKEPF 329
L + + + D++ G M +I + F
Sbjct: 214 YLSTGKSSEKT-DVFGYGVMLLELITGQRAF 243
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY-- 293
++ + Y +HRD++ N+++ E ++ D+GLA E+ R +++
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLARLIE-DNEWTARQGAKFPI 176
Query: 294 -FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAK 344
+ PE + + D+WS G + + + + G N + L ++ +
Sbjct: 177 KWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 21/155 (13%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELL-------KAL 241
PN+V L +V + K ++ E + N L +D ++ + +L+ +
Sbjct: 104 PNVVHLEGVV--TRGKPVMIVIEFMENGALDAF---LRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 242 DYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYH--PGKEYNV---RVASRYFKG 296
Y G +HRD+ N++++ ++ D+GL+ P Y ++ R+
Sbjct: 159 RYLADMGYVHRDLAARNILVN-SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TA 216
Query: 297 PELLVDLQDYDYSLDLWSLG-CMFAGMIFRKEPFF 330
PE + + + + D+WS G M+ M + + P++
Sbjct: 217 PE-AIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 250
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGK- 283
L D+ + ++ K + Y ++HRD+ NV++ +++ D+GLA +
Sbjct: 116 LGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDET 174
Query: 284 EYNV---RVASRYFKGPELLVDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
EY+ +V ++ +L + + + D+WS G ++ M F +P+
Sbjct: 175 EYHADGGKVPIKWMALESIL--RRRFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|3BIT|A Chain A, Crystal Structure Of Yeast Spt16 N-Terminal Domain
pdb|3BIT|B Chain B, Crystal Structure Of Yeast Spt16 N-Terminal Domain
Length = 453
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 26/126 (20%)
Query: 270 LIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLG------CMFAGMI 323
L+DW + GK++++RV++R + Q Y L S G C
Sbjct: 254 LLDWTYSPIIQSGKKFDLRVSARS-------TNDQLYGNGCILASCGIRYNNYCSNITRT 306
Query: 324 FRKEPFFYGHDNYDQLVKIAKVLGTDELN-------------AYLNKYHIELDPHLAALV 370
F +P +NYD L+ + K + T+ L Y+ K EL P+ +
Sbjct: 307 FLIDPSEEXANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNI 366
Query: 371 GRLVIL 376
G L+ L
Sbjct: 367 GSLIGL 372
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 189 PNIVKLLDIVRDQQSKTPSLIFEHVNNTDF-KVLYPTLSDY---DVRYYIYELLKALDYC 244
P IV+L+ + Q++ L+ E K L + +V ++++ + Y
Sbjct: 70 PYIVRLIGVC---QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126
Query: 245 HSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE-YNVRVASRY---FKGPELL 300
+ +HRD+ NV++ + ++ D+GL++ Y R A ++ + PE
Sbjct: 127 EEKNFVHRDLAARNVLLVNRHYA-KISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-C 184
Query: 301 VDLQDYDYSLDLWSLGC-MFAGMIFRKEPF 329
++ + + D+WS G M+ + + ++P+
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|1CT9|A Chain A, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
pdb|1CT9|B Chain B, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
pdb|1CT9|C Chain C, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
pdb|1CT9|D Chain D, Crystal Structure Of Asparagine Synthetase B From
Escherichia Coli
Length = 553
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 279 YHPGKEYNVRVASRYFKGPELLVDLQD------YDYSLDLWSLGCMFAGMIFRKEPFFYG 332
+ G + V +A KGPE L DLQ YD D + +G G+I P + G
Sbjct: 93 FQTGSDCEVILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGII----PLYMG 148
Query: 333 HDNYDQL 339
+D + QL
Sbjct: 149 YDEHGQL 155
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 235 YELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRY- 293
Y++ + + + S +HRD+ N ++D + +++ D+G+ Y +Y V +++
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRD-LCVKVSDFGMTR-YVLDDQYVSSVGTKFP 168
Query: 294 --FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEL 351
+ PE+ + Y D+W+ G I E F G YD + E+
Sbjct: 169 VKWSAPEVFHYFK-YSSKSDVWAFG------ILMWEVFSLGKMPYD-------LYTNSEV 214
Query: 352 NAYLNKYHIELDPHLAA 368
+++ H PHLA+
Sbjct: 215 VLKVSQGHRLYRPHLAS 231
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKG 296
+++ H +HRD+K N+++D E ++ D+GLA E + + V + +
Sbjct: 136 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXA 194
Query: 297 PELLVDLQDYDYSLDLWSLGCMFAGMI 323
PE L + D++S G + +I
Sbjct: 195 PEAL--RGEITPKSDIYSFGVVLLEII 219
>pdb|3JYS|A Chain A, Crystal Structure Of Susd Superfamily Protein
(Yp_001298690.1) From Bacteroides Vulgatus Atcc 8482 At
2.00 A Resolution
Length = 499
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 94 GKSVRRSGAPSKARVYSDINVVRPREYWDYE-SLTVQWGEQDDY-EVVRKVGRGKYSEVF 151
++V R G SKA IN +R R Y D + +++ W E++++ ++ + GR Y +
Sbjct: 384 AEAVARGGEGSKASAVEYINALRKRAYGDDKHNISENWLEENNFRNLLDERGRELY---W 440
Query: 152 EGVHCTD 158
EG+ TD
Sbjct: 441 EGIRRTD 447
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 261
+ +++ + ++ + L Y HS ++H D+KP N+ I
Sbjct: 110 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 261
+ +++ + ++ + L Y HS ++H D+KP N+ I
Sbjct: 114 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 261
+ +++ + ++ + L Y HS ++H D+KP N+ I
Sbjct: 112 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 227 DYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 261
+ +++ + ++ + L Y HS ++H D+KP N+ I
Sbjct: 112 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA 276
+++ H +HRD+K N+++D E ++ D+GLA
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLA 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA 276
+++ H +HRD+K N+++D E ++ D+GLA
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLA 180
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 236 ELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFK 295
++ +A++Y +HRD+ NV++ E ++ D+GL + + +
Sbjct: 297 DVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTK--EASSTQDTGKLPVKWT 353
Query: 296 GPELLVDLQDYDYSLDLWSLGCMF 319
PE L + + + D+WS G +
Sbjct: 354 APEALRE-KKFSTKSDVWSFGILL 376
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 240 ALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLA 276
+++ H +HRD+K N+++D E ++ D+GLA
Sbjct: 139 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLA 174
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
+ ++ +A++Y +HRD+ NV++ E ++ D+GL + +
Sbjct: 122 FSLDVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTK--EASSTQDTGKLPV 178
Query: 293 YFKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE L + + + D+WS G +
Sbjct: 179 KWTAPEALRE-KKFSTKSDVWSFGILL 204
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
+ D ++ ++++ + Y +HRD+ NV++ Q ++ D+GL++ +
Sbjct: 466 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADEN 524
Query: 285 -YNVRVASRY---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNY 336
Y + ++ + PE ++ + D+WS G + E F YG Y
Sbjct: 525 YYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMW------EAFSYGQKPY 573
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 237 LLKALDYCHSQGIMHRDVKPHNVMIDHEQ-RKLRLIDWGLAEFYHP 281
+L L+Y H +H D+K N+++ ++ ++ L D+GL+ Y P
Sbjct: 160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCP 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 233 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASR 292
+ ++ +A++Y +HRD+ NV++ E ++ D+GL + +
Sbjct: 107 FSLDVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVAKVSDFGLTK--EASSTQDTGKLPV 163
Query: 293 YFKGPELLVDLQDYDYSLDLWSLGCMF 319
+ PE L + + + D+WS G +
Sbjct: 164 KWTAPEALRE-KKFSTKSDVWSFGILL 189
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 12/116 (10%)
Query: 225 LSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKE 284
+ D ++ ++++ + Y +HRD+ NV++ Q ++ D+GL++ +
Sbjct: 467 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-TQHYAKISDFGLSKALRADEN 525
Query: 285 -YNVRVASRY---FKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNY 336
Y + ++ + PE ++ + D+WS G + E F YG Y
Sbjct: 526 YYKAQTHGKWPVKWYAPE-CINYYKFSSKSDVWSFGVLMW------EAFSYGQKPY 574
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,037,271
Number of Sequences: 62578
Number of extensions: 416608
Number of successful extensions: 3061
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 1176
Number of HSP's gapped (non-prelim): 1298
length of query: 427
length of database: 14,973,337
effective HSP length: 102
effective length of query: 325
effective length of database: 8,590,381
effective search space: 2791873825
effective search space used: 2791873825
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)