Your job contains 1 sequence.
>014308
MSNPQQISASSSRFPDNIHFSSVSPHERYSQNSPFISQSLRDEARLRSTHFSPSEGQPTP
LINHPEENKDNSWCIDPLQDFLDFPENDPGQTGLLESNTGDIASDDRAKRIEWWADQLIS
VEDGPEPNWSEVLADANVTDARQKVLKPSTDIPTQHPQVHPQGQQHQPVSNEEFHAVANP
LSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY
RTARHRPESSEGTSEKKSNPTEDMKSLDTKTTMSITEALRLQMEVQKRLHEQLEIQRNLQ
LRIEEQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLFESKQHSSPNETSMATELDVA
KTGADTSHVISAPEDSSASLNQKQKAPETKTGEEVDPDDDESGHKPVKRARSEATAFSPK
SALGNTL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014308
(427 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2148720 - symbol:PHL1 "AT5G29000" species:3702... 736 7.5e-73 1
TAIR|locus:2100880 - symbol:AT3G04450 species:3702 "Arabi... 727 6.7e-72 1
TAIR|locus:2139865 - symbol:PHR1 "phosphate starvation re... 625 4.2e-65 2
TAIR|locus:2170199 - symbol:AT5G06800 species:3702 "Arabi... 455 2.9e-46 2
TAIR|locus:2045761 - symbol:AT2G01060 species:3702 "Arabi... 463 6.4e-44 1
TAIR|locus:2038957 - symbol:AT2G20400 "AT2G20400" species... 461 1.0e-43 1
TAIR|locus:2089260 - symbol:AT3G13040 species:3702 "Arabi... 417 4.8e-39 1
TAIR|locus:2172394 - symbol:MYR1 "myb-related protein 1" ... 350 2.7e-34 2
TAIR|locus:2095933 - symbol:MYR2 species:3702 "Arabidopsi... 326 5.5e-32 2
TAIR|locus:2206415 - symbol:APL "ALTERED PHLOEM DEVELOPME... 329 1.0e-29 1
TAIR|locus:2093726 - symbol:AT3G24120 species:3702 "Arabi... 329 1.0e-29 1
TAIR|locus:2119425 - symbol:UNE16 "unfertilized embryo sa... 321 7.1e-29 1
TAIR|locus:2087740 - symbol:AT3G12730 species:3702 "Arabi... 270 2.5e-23 1
TAIR|locus:2026739 - symbol:AT1G69580 species:3702 "Arabi... 254 1.8e-21 1
TAIR|locus:2157146 - symbol:AT5G45580 species:3702 "Arabi... 240 7.0e-20 1
TAIR|locus:2163852 - symbol:ATS "AT5G42630" species:3702 ... 203 7.9e-18 2
TAIR|locus:2041145 - symbol:AT2G02060 species:3702 "Arabi... 208 2.6e-16 1
TAIR|locus:2041539 - symbol:AT2G42660 "AT2G42660" species... 207 3.4e-16 1
TAIR|locus:2204518 - symbol:AT1G14600 "AT1G14600" species... 201 1.5e-15 1
TAIR|locus:505006489 - symbol:KAN3 "AT4G17695" species:37... 206 1.8e-14 1
TAIR|locus:2063141 - symbol:AT2G40260 "AT2G40260" species... 209 2.5e-14 1
TAIR|locus:2171427 - symbol:KAN "KANADI" species:3702 "Ar... 204 9.1e-14 1
TAIR|locus:2028346 - symbol:KAN2 "AT1G32240" species:3702... 203 1.0e-13 1
UNIPROTKB|Q0J235 - symbol:RL9 "Probable transcription fac... 204 1.8e-13 1
TAIR|locus:2125771 - symbol:AT4G04580 "AT4G04580" species... 178 5.2e-13 1
TAIR|locus:2051572 - symbol:AT2G06020 "AT2G06020" species... 181 2.2e-12 2
TAIR|locus:2042927 - symbol:AT2G38300 "AT2G38300" species... 187 4.6e-12 1
TAIR|locus:2063746 - symbol:AT2G03500 "AT2G03500" species... 177 1.3e-10 1
TAIR|locus:2031210 - symbol:AT1G25550 species:3702 "Arabi... 171 3.4e-10 1
TAIR|locus:2115070 - symbol:AT4G37180 species:3702 "Arabi... 159 9.0e-09 1
TAIR|locus:2026863 - symbol:AT1G68670 species:3702 "Arabi... 158 1.1e-08 1
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 158 1.3e-08 1
TAIR|locus:2167639 - symbol:GLK2 "AT5G44190" species:3702... 157 1.8e-08 1
TAIR|locus:2058445 - symbol:MYBC1 "AT2G40970" species:370... 151 2.0e-08 1
TAIR|locus:2010297 - symbol:AT1G49560 "AT1G49560" species... 155 2.0e-08 1
TAIR|locus:2085984 - symbol:AT3G25790 species:3702 "Arabi... 155 2.4e-08 1
UNIPROTKB|Q5Z5I4 - symbol:GLK1 "Probable transcription fa... 154 5.3e-08 1
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 153 1.1e-07 1
TAIR|locus:2175364 - symbol:AT5G05090 "AT5G05090" species... 146 1.1e-07 1
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 151 1.6e-07 1
TAIR|locus:2103247 - symbol:AT3G10760 "AT3G10760" species... 147 1.7e-07 1
TAIR|locus:2148348 - symbol:BOA "AT5G59570" species:3702 ... 145 2.1e-07 1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 151 2.2e-07 1
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 145 3.0e-07 1
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 145 3.0e-07 1
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 148 3.1e-07 1
TAIR|locus:2205339 - symbol:HRS1 "HYPERSENSITIVITY TO LOW... 144 3.9e-07 1
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 146 7.5e-07 1
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops... 143 1.2e-06 1
DICTYBASE|DDB_G0270760 - symbol:DDB_G0270760 "unknown" sp... 121 0.00068 1
UNIPROTKB|G1LTM7 - symbol:AHI1 "Uncharacterized protein" ... 120 0.00092 1
UNIPROTKB|D2H0U8 - symbol:PANDA_003072 "Putative uncharac... 120 0.00097 1
>TAIR|locus:2148720 [details] [associations]
symbol:PHL1 "AT5G29000" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AC018632 EMBL:BT002344 EMBL:AY085154 IPI:IPI00527102
IPI:IPI00527253 IPI:IPI00891441 RefSeq:NP_001078629.1
RefSeq:NP_001119299.1 RefSeq:NP_568512.3 RefSeq:NP_851090.1
UniGene:At.26183 ProteinModelPortal:Q8GUN5 SMR:Q8GUN5 PRIDE:Q8GUN5
EnsemblPlants:AT5G29000.2 GeneID:833026 KEGG:ath:AT5G29000
TAIR:At5g29000 eggNOG:NOG275266 InParanoid:Q8GUN5 OMA:DSSSHNP
PhylomeDB:Q8GUN5 ProtClustDB:CLSN2680328 Genevestigator:Q8GUN5
Uniprot:Q8GUN5
Length = 413
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 169/346 (48%), Positives = 223/346 (64%)
Query: 1 MSNP---QQISASSSR---FPDNIHFSSVS---PHERYSQNSPFISQSLRDEARLRSTHF 51
M+NP Q +S +S FP + + +VS PH R QN P +S RD ++
Sbjct: 44 MNNPVPCQSVSGGNSGGYLFPSSSGYCNVSAVLPHGRNLQNQPPVSTVPRDRLAMQDC-- 101
Query: 52 SPSEGQPTPLINHPEENKDNSWCIDPLQDFLDFPENDPGQTGLLESNTGDIASD-DRAKR 110
P Q + + +HP+E IDPL +F DF ++ P Q ES+ + S + K+
Sbjct: 102 -PLIAQSSLINHHPQE------FIDPLHEFFDFSDHVPVQNLQAESSGVRVDSSVELHKK 154
Query: 111 IEW--WADQLISVEDGPEPNWSEVLADANVTDARQKVLKPSTDIPTXXXXXXXXXXXXXX 168
EW WADQLISV+DG EPNWSE+L D++ + ++ P D+P
Sbjct: 155 SEWQDWADQLISVDDGSEPNWSELLGDSSSHNPNSEIPTPFLDVPRLDITANQQQQMV-- 212
Query: 169 XSNEEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENL 228
S+E+ + N S +K RMRWTPELHEAFVEAVN+LGG ERATPK VLKL+N L
Sbjct: 213 -SSEDQLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLNNPGL 271
Query: 229 TIYHVKSHLQKYRTARHRPESSEGTSE---KKSNPTEDMKSLDTKTTMSITEALRLQMEV 285
TIYHVKSHLQKYRTAR++PE+SE T E KK ED+KSLD KT++ IT+ALRLQMEV
Sbjct: 272 TIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVEITQALRLQMEV 331
Query: 286 QKRLHEQLEIQRNLQLRIEEQGRHLQMMFEQRKQMENEKSKASSSS 331
QKRLHEQLEIQR+LQL+IE+QGR+LQMMFE+++++++ KS +S +S
Sbjct: 332 QKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQKIQDNKSSSSEAS 377
>TAIR|locus:2100880 [details] [associations]
symbol:AT3G04450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00540345 RefSeq:NP_187095.2 UniGene:At.40835
ProteinModelPortal:F4J3P7 SMR:F4J3P7 PRIDE:F4J3P7
EnsemblPlants:AT3G04450.1 GeneID:819601 KEGG:ath:AT3G04450
OMA:WPDWADQ Uniprot:F4J3P7
Length = 442
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 187/403 (46%), Positives = 242/403 (60%)
Query: 2 SNPQQISASSSRFPDNIHFSSVSPHERYSQNSPFISQSLRDEARLRSTHFS--------P 53
S+ + +SSS F + ++ SS S Q P +S RD R+ H S P
Sbjct: 58 SSGGNLFSSSSGFCNGVYVSSSS------QARPSVSTVPRD--RITVAHVSGEGQRQECP 109
Query: 54 SEGQPTPLINHPEENKDNSWCIDPLQDFLDFPENDPGQTGLLESNTGDIASDDRAKRIEW 113
E LIN P+E K +W D ++ F DFP DP Q S T ++S + + EW
Sbjct: 110 VETHSLQLINQPQEQKIMTWSSDQIRGFFDFPVPDP-QAA--SSRTM-VSSKEVLSKCEW 165
Query: 114 --WADQLISVEDGPEPNWSEVLADANVTDARQKVLKPSTDIPTXXXXXXXXXXXXXXXSN 171
WADQLIS +D EPNWSE+L D NV + K+ S+DI S
Sbjct: 166 PDWADQLIS-DDSLEPNWSELLGDPNVLNLYSKIETQSSDI--ARQEIVFRNQHQVDPSM 222
Query: 172 EEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIY 231
E F+A + P S + +K RMRWTPELHEAFVEA+N+LGG ERATPK VLKL+N LT+Y
Sbjct: 223 EPFNAKSPPAS-SMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVY 281
Query: 232 HVKSHLQKYRTARHRPESSEGTSE---KKSNPTEDMKSLDTKTTMSITEALRLQMEVQKR 288
HVKSHLQKYRTAR++PE S+ T E K ED+KSLD KT++ ITEALRLQM+VQK+
Sbjct: 282 HVKSHLQKYRTARYKPELSKDTEEPLVKNLKTIEDIKSLDLKTSIEITEALRLQMKVQKQ 341
Query: 289 LHEQLEIQRNLQLRIEEQGRHLQMMFE-QRKQMENEKSKASSSSLE--NPSAP---LFES 342
LHEQLEIQR+LQL+IEEQGR+LQMM E Q+K EN+K SSSS+ +PSAP L +
Sbjct: 342 LHEQLEIQRSLQLQIEEQGRYLQMMIEKQQKMQENKKDSTSSSSMPEADPSAPSPNLSQP 401
Query: 343 KQHSSPN-ETSMATELDVAKTGADTSHVISAPEDSSASLNQKQ 384
H + N E S+ +L + G+ T + E +S + N+K+
Sbjct: 402 FLHKATNSEPSITQKL---QNGSST---MDQSESTSGTSNRKR 438
>TAIR|locus:2139865 [details] [associations]
symbol:PHR1 "phosphate starvation response 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IMP] [GO:0055063 "sulfate ion homeostasis" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IEP] [GO:0071486 "cellular
response to high light intensity" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016036 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0071486
HOGENOM:HOG000064669 EMBL:AY081290 EMBL:BT002187 EMBL:AJ310799
IPI:IPI00520685 RefSeq:NP_194590.2 UniGene:At.4525
ProteinModelPortal:Q94CL7 SMR:Q94CL7 PaxDb:Q94CL7 PRIDE:Q94CL7
EnsemblPlants:AT4G28610.1 GeneID:828979 KEGG:ath:AT4G28610
TAIR:At4g28610 eggNOG:NOG275307 InParanoid:Q94CL7 OMA:EKQCKSG
PhylomeDB:Q94CL7 ProtClustDB:CLSN2915055 Genevestigator:Q94CL7
GO:GO:0055063 Uniprot:Q94CL7
Length = 409
Score = 625 (225.1 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 154/326 (47%), Positives = 194/326 (59%)
Query: 47 RSTHFSPSEGQPTPLINHPEENKDNSWCIDPLQD-FLDFPENDPGQTGLLESNTGDIAS- 104
+ H++ S + P N D++WC D L FLDF E +P + G IA+
Sbjct: 87 KQQHYTGSSSNNA--VQTPSNN-DSAWCHDSLPGGFLDFHETNPAIQNNCQIEDGGIAAA 143
Query: 105 -DDRAKRIEW--WADQLISVEDGP--EPNWSEVLADANV-TDAR-QKVLK-PSTDIPTXX 156
DD KR +W WAD LI+ +D P NW+++L + N +D++ QK L+ P I
Sbjct: 144 FDDIQKRSDWHEWADHLIT-DDDPLMSTNWNDLLLETNSNSDSKDQKTLQIPQPQIVQQQ 202
Query: 157 XXXXXXXXXXXXXSNEEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATP 216
S+ S K+RMRWTPELHEAFVEAVN LGG ERATP
Sbjct: 203 PSPSVELRPVSTTSSN---------SNNGTGKARMRWTPELHEAFVEAVNSLGGSERATP 253
Query: 217 KGVLKLMNVENLTIYHVKSHLQKYRTARHRPESSE-GTSEKKSNPTEDMKSLDTKTTMSI 275
KGVLK+M VE LTIYHVKSHLQKYRTAR+RPE SE G+ E+K P E + SLD K + I
Sbjct: 254 KGVLKIMKVEGLTIYHVKSHLQKYRTARYRPEPSETGSPERKLTPLEHITSLDLKGGIGI 313
Query: 276 TEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRHLQMMFEQRKQMENEKSKASSSSL--- 332
TEALRLQMEVQK+LHEQLEIQRNLQLRIEEQG++LQMMFE++ + + ++S S
Sbjct: 314 TEALRLQMEVQKQLHEQLEIQRNLQLRIEEQGKYLQMMFEKQNSGLTKGTASTSDSAAKS 373
Query: 333 ENPSAPLFESKQHSSPNETSMATELD 358
E +SK+ ET EL+
Sbjct: 374 EQEDKKTADSKEVPE-EETRKCEELE 398
Score = 56 (24.8 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 8 SASSSRFPDNIHFSSVSPHER 28
S+SSS F N+H+S++ HE+
Sbjct: 67 SSSSSGFATNLHYSTMVSHEK 87
>TAIR|locus:2170199 [details] [associations]
symbol:AT5G06800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AK226644 IPI:IPI00528070
RefSeq:NP_196298.2 UniGene:At.50439 ProteinModelPortal:Q0WVU3
SMR:Q0WVU3 PRIDE:Q0WVU3 EnsemblPlants:AT5G06800.1 GeneID:830570
KEGG:ath:AT5G06800 TAIR:At5g06800 eggNOG:NOG298644
HOGENOM:HOG000241107 InParanoid:Q0WVU3 OMA:MDNINFE
ProtClustDB:CLSN2918619 Genevestigator:Q0WVU3 Uniprot:Q0WVU3
Length = 375
Score = 455 (165.2 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 94/170 (55%), Positives = 121/170 (71%)
Query: 182 SMTP--ANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQK 239
SM P NK+R+RWT +LHE FVE VNRLGG ++ATPK +LK M+ + LTI+HVKSHLQK
Sbjct: 184 SMAPNCVNKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQK 243
Query: 240 YRTARHRPESSEGTSEKKSNPTEDMKSLDTKTTMSITEALRLQMEVQKRLHEQLEIQRNL 299
YR A++ PES EG EK++ E + LDT+T + I EAL+LQ++VQ+ LHEQLEIQRNL
Sbjct: 244 YRIAKYMPESQEGKFEKRACAKE-LSQLDTRTGVQIKEALQLQLDVQRHLHEQLEIQRNL 302
Query: 300 QLRIEEQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLFESKQHSSPN 349
QLRIEEQG+ L+MM EQ Q +N++S S L + HS P+
Sbjct: 303 QLRIEEQGKQLKMMMEQ--QQKNKESLLKKLPDAEASLSLLDPHIHSPPS 350
Score = 47 (21.6 bits), Expect = 2.9e-46, Sum P(2) = 2.9e-46
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 2 SNPQQISASSSRFPDNIHFSSVSPHERYSQNSPFISQSL 40
S P Q S SS +P + H P+ S +SP + QS+
Sbjct: 63 SFPVQCS-SSKPYPSSFH-----PYHHQSSDSPSLDQSV 95
>TAIR|locus:2045761 [details] [associations]
symbol:AT2G01060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006837
EMBL:AF370550 EMBL:AY084725 EMBL:BT000013 IPI:IPI00544604
PIR:B84420 RefSeq:NP_178216.1 UniGene:At.24449
ProteinModelPortal:Q9SJW0 SMR:Q9SJW0 EnsemblPlants:AT2G01060.1
GeneID:814630 KEGG:ath:AT2G01060 TAIR:At2g01060 eggNOG:NOG329415
InParanoid:Q9SJW0 OMA:TNELHER PhylomeDB:Q9SJW0
ProtClustDB:CLSN2683513 ArrayExpress:Q9SJW0 Genevestigator:Q9SJW0
Uniprot:Q9SJW0
Length = 286
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 108/246 (43%), Positives = 153/246 (62%)
Query: 186 ANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARH 245
A+K R+RWT ELHE FV+AV +LGG +RATPKGVL++M V+ LTIYHVKSHLQKYR A++
Sbjct: 13 ASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKY 72
Query: 246 RPESS-EGTSEKKSNPTEDMKSLDTKTTMSITEALRLQMEVQKRLHEQLEIQRNLQLRIE 304
P+SS EG K + + LD + M ITEAL+LQMEVQKRLHEQLE+QR LQLRIE
Sbjct: 73 LPDSSSEGKKTDKKESGDMLSGLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIE 132
Query: 305 EQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLFESKQHSSPNETSMATELDVAKTGA 364
QG++L+ + E+++++ S L PSAP+ ++P TS + D K+G
Sbjct: 133 AQGKYLKKIIEEQQRL--------SGVLGEPSAPVTGDSDPATPAPTSESPLQD--KSGK 182
Query: 365 DTSHVISAPEDSSASLNQKQKAPETKTGEEVDPDDDESGHKPV-KRAR--SEATAFSPKS 421
D S D S S ++ P++ G + D+ +G + + K+ R A ++P
Sbjct: 183 DCGPDKSLSVDESLSSYREPLTPDS--GCNIGSPDESTGEERLSKKPRLVRGAAGYTPDI 240
Query: 422 ALGNTL 427
+G+ +
Sbjct: 241 VVGHPI 246
>TAIR|locus:2038957 [details] [associations]
symbol:AT2G20400 "AT2G20400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006119
EMBL:AK118313 IPI:IPI00521384 RefSeq:NP_179630.2 UniGene:At.43867
ProteinModelPortal:Q8GXC2 SMR:Q8GXC2 PaxDb:Q8GXC2 PRIDE:Q8GXC2
EnsemblPlants:AT2G20400.1 GeneID:816559 KEGG:ath:AT2G20400
TAIR:At2g20400 eggNOG:NOG265443 HOGENOM:HOG000064669
InParanoid:Q8GXC2 OMA:ANSMENR PhylomeDB:Q8GXC2
ProtClustDB:CLSN2918042 Genevestigator:Q8GXC2 Uniprot:Q8GXC2
Length = 397
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 122/305 (40%), Positives = 160/305 (52%)
Query: 60 PLINHPEENKDNSWCIDPLQDFLDFPENDPGQTGLLESNTGDIASDDRAKRIEWWADQLI 119
P N PE W PL FP P ++E G I + + W D LI
Sbjct: 103 PGFNCPETT---DWIPSPLPHIY-FPSGSPNL--IMED--GVIDEIHKQSDLPLWYDDLI 154
Query: 120 SVEDGPEPN--WSEVLADANVTDA--------RQKVLKPSTDIPTXXXXXXXXXXXXXXX 169
+ ++ P + ++L D N A + ++ +P +
Sbjct: 155 TTDEDPLMSSILGDLLLDTNFNSASKVQQPSMQSQIQQPQAVLQQPSSCVELRPLDRTVS 214
Query: 170 SNEEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLT 229
SN ++ +N + A K RMRWTPELHE FV+AVN+LGG ATPKGVLK M VE LT
Sbjct: 215 SNSNNNSNSN--NAAAAAKGRMRWTPELHEVFVDAVNQLGGSNEATPKGVLKHMKVEGLT 272
Query: 230 IYHVKSHLQKYRTARHRPESSEGTSEKKSNPTEDMKSLDTKTTMSITEALRLQMEVQKRL 289
I+HVKSHLQKYRTA++ P SEG+ E + P E + S DTK + ITE LR+QME QK+L
Sbjct: 273 IFHVKSHLQKYRTAKYIPVPSEGSPEARLTPLEQITSDDTKRGIDITETLRIQMEHQKKL 332
Query: 290 HEQLEIQRNLQLRIEEQGRHLQMMFEQRKQM---ENEKSKASSSSLENPSAPLFESKQHS 346
HEQLE R +QLRIEEQG+ L MM E++ + K S+ + EN S ES +
Sbjct: 333 HEQLESLRTMQLRIEEQGKALLMMIEKQNMGFGGPEQGEKTSAKTPENGSEES-ESPRPK 391
Query: 347 SP-NE 350
P NE
Sbjct: 392 RPRNE 396
>TAIR|locus:2089260 [details] [associations]
symbol:AT3G13040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY050889 EMBL:AY096674
IPI:IPI00543771 RefSeq:NP_566442.1 RefSeq:NP_974298.1
UniGene:At.11993 ProteinModelPortal:Q949U2 SMR:Q949U2 STRING:Q949U2
PRIDE:Q949U2 EnsemblPlants:AT3G13040.1 EnsemblPlants:AT3G13040.2
GeneID:820490 KEGG:ath:AT3G13040 OMA:RIEEHAK
ProtClustDB:CLSN2688327 ArrayExpress:Q949U2 Genevestigator:Q949U2
Uniprot:Q949U2
Length = 449
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/229 (44%), Positives = 138/229 (60%)
Query: 178 ANPLSMTPAN-KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSH 236
++P + AN KSRMRWTPELHE+FV+AV +L G E+ATPK V KLMNVE LTIYHVKSH
Sbjct: 230 SHPSPGSAANQKSRMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKSH 289
Query: 237 LQKYRTARHRPESSEGTSEKKSNPTEDMK------SLDTKT--TMSITEALRLQMEVQKR 288
LQKYR A++ PE E EK+++ +E+ K D K + +TEALR+QMEVQK+
Sbjct: 290 LQKYRLAKYMPEKKE---EKRTDNSEEKKLALSKSEADEKKKGAIQLTEALRMQMEVQKQ 346
Query: 289 LHEQLEIQRNLQLRIEEQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLFESKQHSSP 348
LHEQLE+QR LQLRIEE ++L+ M E++++ S +S + L + +S+ S
Sbjct: 347 LHEQLEVQRVLQLRIEEHAKYLEKMLEEQRKTGRWISSSSQTVLSPSDDSIPDSQNMSKT 406
Query: 349 NETSMATELDVAKTGADTSHVISAPEDSSASLNQKQKAPETKTGEEVDP 397
+S L ++T ED QK++ E E DP
Sbjct: 407 KASSPQPPLPAENKASET-------EDDKCESPQKRRRLEN-IAESEDP 447
>TAIR|locus:2172394 [details] [associations]
symbol:MYR1 "myb-related protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB012246
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00538966 RefSeq:NP_197325.1 RefSeq:NP_974798.1
UniGene:At.7556 ProteinModelPortal:Q9FK47 SMR:Q9FK47
EnsemblPlants:AT5G18240.1 EnsemblPlants:AT5G18240.4 GeneID:831942
KEGG:ath:AT5G18240 TAIR:At5g18240 InParanoid:Q9FK47 OMA:LETHTRT
PhylomeDB:Q9FK47 ProtClustDB:CLSN2686543 Genevestigator:Q9FK47
Uniprot:Q9FK47
Length = 402
Score = 350 (128.3 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 74/169 (43%), Positives = 115/169 (68%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
K R++WTP+LHE FVEAVN+LGGG++ATPK ++K+M + LT+YH+KSHLQKYR +++
Sbjct: 45 KPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLN 104
Query: 248 ESSEGTSEKKS-------NPTE------DMKSLDTKTTMS--ITEALRLQMEVQKRLHEQ 292
+ + K S NP E + S+ + +M+ I++AL++Q+EVQ+RLHEQ
Sbjct: 105 GQANSSLNKTSVMTMVEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQ 164
Query: 293 LEIQRNLQLRIEEQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLFE 341
LE+QR+LQLRIE QG++LQ + E+ ++ ++ ++ +E A L E
Sbjct: 165 LEVQRHLQLRIEAQGKYLQSILEKAQETLGRQN-LGAAGIEATKAQLSE 212
Score = 38 (18.4 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 86 ENDPGQTGLLESNTGDIASDDRAKRIEWWAD 116
E P G ++G I S D R++W D
Sbjct: 23 ERHPFLRGNGTGDSGLILSTDAKPRLKWTPD 53
>TAIR|locus:2095933 [details] [associations]
symbol:MYR2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011698
ProtClustDB:CLSN2686543 IPI:IPI00524229 RefSeq:NP_001118567.1
UniGene:At.40915 ProteinModelPortal:Q9SQQ9 SMR:Q9SQQ9
EnsemblPlants:AT3G04030.3 GeneID:819558 KEGG:ath:AT3G04030
TAIR:At3g04030 InParanoid:Q9SQQ9 OMA:HITSERH PhylomeDB:Q9SQQ9
Genevestigator:Q9SQQ9 Uniprot:Q9SQQ9
Length = 394
Score = 326 (119.8 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 72/182 (39%), Positives = 116/182 (63%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
K R++WTP+LHE F+EAVN+LGG ++ATPK ++K+M + LT+YH+KSHLQKYR +++
Sbjct: 45 KPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLN 104
Query: 248 ESSEGT---------SEKKSNPTEDMKSLDTKT------TMSITEALRLQMEVQKRLHEQ 292
+ + E+K+ ++++S + I EAL++Q+EVQ+RLHEQ
Sbjct: 105 GQANNSFNKIGIMTMMEEKTPDADEIQSENLSIGPQPNKNSPIGEALQMQIEVQRRLHEQ 164
Query: 293 LEIQRNLQLRIEEQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLFE--SKQHSS-PN 349
LE+QR+LQLRIE QG++LQ + E+ ++ ++ ++ +E L E SK + PN
Sbjct: 165 LEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQN-LGAAGIEAAKVQLSELVSKVSAEYPN 223
Query: 350 ET 351
+
Sbjct: 224 SS 225
Score = 40 (19.1 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 87 NDPGQTGLLESNTGDIASDDRAKRIEWWAD 116
N PG +GL I S D R++W D
Sbjct: 31 NSPGDSGL-------ILSTDAKPRLKWTPD 53
>TAIR|locus:2206415 [details] [associations]
symbol:APL "ALTERED PHLOEM DEVELOPMENT" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010088 "phloem development"
evidence=IMP] [GO:0010089 "xylem development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010089 EMBL:AC007202 EMBL:AY045662 EMBL:AY143841
EMBL:AK316719 IPI:IPI00538563 IPI:IPI00542908 PIR:D96825
RefSeq:NP_565209.1 RefSeq:NP_849905.1 UniGene:At.23550 HSSP:O49397
ProteinModelPortal:Q9SAK5 SMR:Q9SAK5 IntAct:Q9SAK5 STRING:Q9SAK5
PRIDE:Q9SAK5 EnsemblPlants:AT1G79430.2 GeneID:844281
KEGG:ath:AT1G79430 TAIR:At1g79430 eggNOG:NOG261203
HOGENOM:HOG000239390 InParanoid:Q94AW3 OMA:CQTLAGE PhylomeDB:Q9SAK5
ProtClustDB:CLSN2689327 Genevestigator:Q9SAK5 GO:GO:0010088
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 Uniprot:Q9SAK5
Length = 358
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 66/155 (42%), Positives = 105/155 (67%)
Query: 181 LSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY 240
L +T K R+RWT ELHE FV+AV +LGG ++ATPK ++++M V+ LT+YH+KSHLQK+
Sbjct: 27 LVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKF 86
Query: 241 RTAR--HRPESSEGTSE-KKSNPTEDMKSLDTKTTMSITEALRLQMEVQKRLHEQLEIQR 297
R + H+ T E +++ + +++ + + M +QMEVQ+RLHEQLE+QR
Sbjct: 87 RLGKQPHKEYGDHSTKEGSRASAMDIQRNVASSSGMMSRNMNEMQMEVQRRLHEQLEVQR 146
Query: 298 NLQLRIEEQGRHLQMMFEQRKQ-MENEKSKASSSS 331
+LQLRIE QG+++Q + E+ Q + E A++++
Sbjct: 147 HLQLRIEAQGKYMQSILERACQTLAGENMAAATAA 181
>TAIR|locus:2093726 [details] [associations]
symbol:AT3G24120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00531757
RefSeq:NP_974356.1 UniGene:At.26588 ProteinModelPortal:F4J5D9
SMR:F4J5D9 EnsemblPlants:AT3G24120.2 GeneID:821998
KEGG:ath:AT3G24120 OMA:NLPGDAC PhylomeDB:F4J5D9 Uniprot:F4J5D9
Length = 298
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 81/190 (42%), Positives = 116/190 (61%)
Query: 181 LSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY 240
L +T K R+RWT ELHE FV+AV +LGG ++ATPK +++ M V+ LT+YH+KSHLQK+
Sbjct: 34 LVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKF 93
Query: 241 RTARHR-PESSEGTSEKK---------SNPTEDMKSLDTKTT--MSITEALRLQMEVQKR 288
R R ES+E + + S+ T M+ + +TEALR QMEVQ+R
Sbjct: 94 RLGRQAGKESTENSKDASCVGESQDTGSSSTSSMRMAQQEQNEGYQVTEALRAQMEVQRR 153
Query: 289 LHEQLE---IQRNLQLRIEEQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLFES--K 343
LH+QLE +QR LQLRIE QG++LQ + E+ + +E++ A+ + LE L E K
Sbjct: 154 LHDQLEYGQVQRRLQLRIEAQGKYLQSILEKACKAFDEQA-ATFAGLEAAREELSELAIK 212
Query: 344 QHSSPNETSM 353
+S TS+
Sbjct: 213 VSNSSQGTSV 222
>TAIR|locus:2119425 [details] [associations]
symbol:UNE16 "unfertilized embryo sac 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009567 "double fertilization forming a
zygote and endosperm" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009567
IPI:IPI00657591 RefSeq:NP_001031626.1 UniGene:At.22199
ProteinModelPortal:F4JTR5 SMR:F4JTR5 PRIDE:F4JTR5
EnsemblPlants:AT4G13640.2 GeneID:826998 KEGG:ath:AT4G13640
OMA:LPIDACL PhylomeDB:F4JTR5 Uniprot:F4JTR5
Length = 295
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 75/159 (47%), Positives = 101/159 (63%)
Query: 181 LSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY 240
L +T K R+RWT ELHE FV+AV +LGG ++ATPK +++ M V+ LT+YH+KSHLQK+
Sbjct: 30 LVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKF 89
Query: 241 RTARHRPESSEGTSEKKSNPTE--DMKSLDTKT----------TMSITEALRLQMEVQKR 288
R R + S S+ S E D S T + + +TEALR QMEVQ+R
Sbjct: 90 RLGRQSCKESIDNSKDVSCVAESQDTGSSSTSSLRLAAQEQNESYQVTEALRAQMEVQRR 149
Query: 289 LHEQLE---IQRNLQLRIEEQGRHLQMMFEQR-KQMENE 323
LHEQLE +QR LQLRIE QG++LQ + E+ K +E +
Sbjct: 150 LHEQLEYTQVQRRLQLRIEAQGKYLQSILEKACKAIEEQ 188
>TAIR|locus:2087740 [details] [associations]
symbol:AT3G12730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY070764
EMBL:AY143916 IPI:IPI00519091 RefSeq:NP_187879.2 UniGene:At.28330
ProteinModelPortal:Q8VYI2 SMR:Q8VYI2 EnsemblPlants:AT3G12730.1
GeneID:820455 KEGG:ath:AT3G12730 TAIR:At3g12730 eggNOG:NOG317938
InParanoid:Q8VYI2 OMA:CETQEAS PhylomeDB:Q8VYI2
ProtClustDB:CLSN2917937 Genevestigator:Q8VYI2 Uniprot:Q8VYI2
Length = 235
Score = 270 (100.1 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 68/193 (35%), Positives = 113/193 (58%)
Query: 170 SNEEFHAVANP-LSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENL 228
S EE ++ L +T K R+RWT ELHE FV+AV LGG E+ATPK ++++M V+ L
Sbjct: 4 SREEIRDDSSSGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGL 63
Query: 229 TIYHVKSHLQKYRTAR--HRPES-SEGTSEKKSNPTE--DMK--SLDTKTTMSITEALR- 280
T+YH+KSHLQK+R + H+ S + + +N D++ ++ T + + I +
Sbjct: 64 TLYHLKSHLQKFRLGKQPHKEHSQNHSICIRDTNRASMLDLRRNAVFTTSPLIIGRNMNE 123
Query: 281 LQMEVQKRLHEQLEIQRNLQLRIEEQGRHLQMMFEQRKQMENEKSKASSSSLENPSAPLF 340
+QMEVQ+R+ E++ I+R + RI QG++++ M E K E +++ SL + LF
Sbjct: 124 MQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLE--KACETQEA-----SLTKDYSTLF 176
Query: 341 ESKQHSSPNETSM 353
+ + N +S+
Sbjct: 177 FDRTNICNNTSSI 189
>TAIR|locus:2026739 [details] [associations]
symbol:AT1G69580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 EMBL:AC021046 IPI:IPI00846148
RefSeq:NP_001077798.1 UniGene:At.52449 ProteinModelPortal:A8MSE5
SMR:A8MSE5 PRIDE:A8MSE5 EnsemblPlants:AT1G69580.2 GeneID:843294
KEGG:ath:AT1G69580 TAIR:At1g69580 eggNOG:NOG249461 OMA:MEINNNA
PhylomeDB:A8MSE5 ProtClustDB:CLSN2699064 ArrayExpress:A8MSE5
Genevestigator:A8MSE5 Uniprot:A8MSE5
Length = 337
Score = 254 (94.5 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 59/166 (35%), Positives = 95/166 (57%)
Query: 175 HAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVK 234
H L ++ K R++WT +LH F+EAVN+LGG +ATPKG++K+M + LT+YH+K
Sbjct: 21 HKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLK 80
Query: 235 SHLQKYRTAR------HRPE---SSEGTSEKKSNPTEDMKSLDTKTTMSITEALRLQMEV 285
SHLQKYR + ++ E +SE + N + D++ T + A +++
Sbjct: 81 SHLQKYRLGKSMKFDDNKLEVSSASENQEVESKNDSRDLRGCSV-TEENSNPAKDRGLQI 139
Query: 286 QKRLHEQLEIQRNLQLRIEEQGRHLQMMFE-QRKQMENEKSKASSS 330
+ L Q+E+Q+ L +IE Q RHLQ+ E Q K +++ KA +
Sbjct: 140 TEALQMQMEVQKKLHEQIEVQ-RHLQVKIEAQGKYLQSVLMKAQQT 184
>TAIR|locus:2157146 [details] [associations]
symbol:AT5G45580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00931042
RefSeq:NP_199371.2 UniGene:At.50506 ProteinModelPortal:F4KEK2
SMR:F4KEK2 PRIDE:F4KEK2 DNASU:834596 EnsemblPlants:AT5G45580.1
GeneID:834596 KEGG:ath:AT5G45580 OMA:YQIEVQR Uniprot:F4KEK2
Length = 264
Score = 240 (89.5 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 74/231 (32%), Positives = 112/231 (48%)
Query: 183 MTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRT 242
MT K R+RWT +LH+ FV+AV +LGG ++ATPK VLKLM ++ LT+YH+KSHLQKYR
Sbjct: 2 MTRDPKPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYRL 61
Query: 243 ARHRPESSEGTSEKKSNPTEDMKSLDTKTTMSITEALRLQ--------MEVQKRLHEQLE 294
+ + + T + K N D + I+ R + + + Q++
Sbjct: 62 GQQQGKKQNRTEQNKENAGSSYVHFDNCSQGGISNDSRFDNHQRQSGNVPFAEAMRHQVD 121
Query: 295 IQRNLQLRIEEQGRHLQMMFE-QRKQMENEKSKASSSSLENPSAPLFESKQHSSPN---E 350
Q+ Q ++E Q + LQM E Q K + KA S L +A + Q S N
Sbjct: 122 AQQRFQEQLEVQ-KKLQMRMEAQGKYLLTLLEKAQKS-LPCGNAGETDKGQFSDFNLALS 179
Query: 351 TSMATELDVAKTG--ADTSHVISAPEDSSASLNQKQKAPETKTGEE-VDPD 398
+ ++ K G D SH+ DSS + + +TG+ V P+
Sbjct: 180 GLVGSDRKNEKAGLVTDISHLNGG--DSSQEFRLCGEQEKIETGDACVKPE 228
>TAIR|locus:2163852 [details] [associations]
symbol:ATS "AT5G42630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048481 "ovule development" evidence=IMP] [GO:0080060
"integument development" evidence=IGI;IMP] [GO:0005618 "cell wall"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005618 GO:GO:0030154 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212
PROSITE:PS51293 HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0080060 HOGENOM:HOG000241649 EMBL:AB013391
EMBL:AY048691 EMBL:BT026053 IPI:IPI00541325 IPI:IPI00892123
RefSeq:NP_001119363.1 RefSeq:NP_199077.1 UniGene:At.26412
ProteinModelPortal:Q9FJV5 SMR:Q9FJV5 STRING:Q9FJV5
EnsemblPlants:AT5G42630.1 GeneID:834270 KEGG:ath:AT5G42630
TAIR:At5g42630 eggNOG:NOG280455 InParanoid:Q9FJV5 OMA:PQIYGRD
PhylomeDB:Q9FJV5 ProtClustDB:CLSN2916355 Genevestigator:Q9FJV5
Uniprot:Q9FJV5
Length = 276
Score = 203 (76.5 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 43/71 (60%), Positives = 51/71 (71%)
Query: 190 RMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRPES 249
RMRWT LH FV AV LGG ERATPK VL+LMNV++LT+ HVKSHLQ YRT + +
Sbjct: 107 RMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCTDKG 166
Query: 250 S--EGTSEKKS 258
S EG EK++
Sbjct: 167 SPGEGKVEKEA 177
Score = 39 (18.8 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 10 SSSRFPDNIHFSSVSPHERYSQNSPFISQSLRDEARLRSTHFSP 53
SS+ S +S HE N P +S + RS F P
Sbjct: 40 SSTSSDSGSSLSDLS-HENNFFNKPLLSLGFDHHHQRRSNMFQP 82
>TAIR|locus:2041145 [details] [associations]
symbol:AT2G02060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000239342 EMBL:BT008556 EMBL:BT008699
EMBL:AK229511 IPI:IPI00542007 RefSeq:NP_565281.2 UniGene:At.41520
ProteinModelPortal:Q7X887 SMR:Q7X887 EnsemblPlants:AT2G02060.1
GeneID:814737 KEGG:ath:AT2G02060 TAIR:At2g02060 eggNOG:NOG268656
InParanoid:Q7X887 OMA:WREQEHE ProtClustDB:CLSN2681500
Genevestigator:Q7X887 Uniprot:Q7X887
Length = 256
Score = 208 (78.3 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 46/98 (46%), Positives = 60/98 (61%)
Query: 170 SNEEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLT 229
+ +FH V P +P R+RWTP+LH FV AV LGG RATPK VLK+M+V+ LT
Sbjct: 14 NGNKFHGV-RPYVRSPV--PRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLT 70
Query: 230 IYHVKSHLQKYRTAR----HRPESSEGTSEKKSNPTED 263
I HVKSHLQ YR +PE S +S ++ +E+
Sbjct: 71 ISHVKSHLQMYRGGSKLTLEKPEESSSSSIRRRQDSEE 108
>TAIR|locus:2041539 [details] [associations]
symbol:AT2G42660 "AT2G42660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006931 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AC007087 EMBL:AY074640 EMBL:AY078938
IPI:IPI00542274 PIR:F84856 RefSeq:NP_181794.1 UniGene:At.37023
ProteinModelPortal:Q9SJJ0 SMR:Q9SJJ0 PaxDb:Q9SJJ0 PRIDE:Q9SJJ0
EnsemblPlants:AT2G42660.1 GeneID:818866 KEGG:ath:AT2G42660
TAIR:At2g42660 eggNOG:NOG258430 HOGENOM:HOG000153491 OMA:NREETVE
PhylomeDB:Q9SJJ0 ProtClustDB:CLSN2913320 ArrayExpress:Q9SJJ0
Genevestigator:Q9SJJ0 Uniprot:Q9SJJ0
Length = 255
Score = 207 (77.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 39/67 (58%), Positives = 51/67 (76%)
Query: 186 ANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARH 245
+N R+RWTP+LH +FV AV RLGG +RATPK VL++MN++ L+I HVKSHLQ YR+ +
Sbjct: 48 SNMPRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQMYRSKKL 107
Query: 246 RPESSEG 252
P S G
Sbjct: 108 EPSSRPG 114
>TAIR|locus:2204518 [details] [associations]
symbol:AT1G14600 "AT1G14600" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010657 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AJ630486 EMBL:AY568658
IPI:IPI00523105 RefSeq:NP_172912.3 UniGene:At.41962
ProteinModelPortal:Q700D9 SMR:Q700D9 EnsemblPlants:AT1G14600.1
GeneID:838022 KEGG:ath:AT1G14600 TAIR:At1g14600 eggNOG:NOG329381
HOGENOM:HOG000239342 InParanoid:Q700D9 OMA:NIMNMER
Genevestigator:Q700D9 Uniprot:Q700D9
Length = 255
Score = 201 (75.8 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 170 SNEEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLT 229
SN+ P +P R+RWTPELH +FV AV+ LGG +ATPK VLK+M+V+ LT
Sbjct: 7 SNDGVIGGVRPYVRSPV--PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLT 64
Query: 230 IYHVKSHLQKYRTAR----HRPESSEGTSEKK 257
I HVKSHLQ YR +R +PE S S ++
Sbjct: 65 ISHVKSHLQMYRGSRITLLGKPEESSSPSSRR 96
>TAIR|locus:505006489 [details] [associations]
symbol:KAN3 "AT4G17695" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:Z97344 HOGENOM:HOG000241649 EMBL:AY048690 IPI:IPI00544036
RefSeq:NP_567535.1 UniGene:At.26411 ProteinModelPortal:Q941I2
SMR:Q941I2 PaxDb:Q941I2 PRIDE:Q941I2 EnsemblPlants:AT4G17695.1
GeneID:827490 KEGG:ath:AT4G17695 TAIR:At4g17695 eggNOG:NOG253351
InParanoid:Q941I2 OMA:SSNENEW PhylomeDB:Q941I2
ProtClustDB:CLSN2917571 Genevestigator:Q941I2 Uniprot:Q941I2
Length = 322
Score = 206 (77.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 48/103 (46%), Positives = 66/103 (64%)
Query: 190 RMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTAR--HRP 247
RMRWT LH FV AV LGG ERATPK VL+LM+V++LT+ HVKSHLQ YRT + +P
Sbjct: 166 RMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIKSTEKP 225
Query: 248 ESSEGTSEKKS----NPTEDMKSLDTKTTMSITEALRLQMEVQ 286
+S G S+ ++ N + ++L S +EA R Q++ +
Sbjct: 226 TTSSGQSDCENGSQVNSEREARNLTGLWNNSSSEA-RFQLKAK 267
>TAIR|locus:2063141 [details] [associations]
symbol:AT2G40260 "AT2G40260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC007020
HOGENOM:HOG000090767 IPI:IPI00530168 PIR:C84827 RefSeq:NP_181555.1
UniGene:At.53083 ProteinModelPortal:Q9SIZ5 SMR:Q9SIZ5 PRIDE:Q9SIZ5
EnsemblPlants:AT2G40260.1 GeneID:818618 KEGG:ath:AT2G40260
TAIR:At2g40260 eggNOG:NOG267620 InParanoid:Q9SIZ5 OMA:FRINSHE
PhylomeDB:Q9SIZ5 ProtClustDB:CLSN2913060 ArrayExpress:Q9SIZ5
Genevestigator:Q9SIZ5 Uniprot:Q9SIZ5
Length = 410
Score = 209 (78.6 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 182 SMTPANKS---RMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQ 238
S+ P N+S R+RWTPELH F++AV RLGG +RATPK VL+LMNV+ L+I HVKSHLQ
Sbjct: 73 SVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQ 132
Query: 239 KYRTARHRPESSEG 252
YR+ + E +EG
Sbjct: 133 MYRSKK-TDEPNEG 145
>TAIR|locus:2171427 [details] [associations]
symbol:KAN "KANADI" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0009956 "radial pattern formation" evidence=IMP] [GO:0010051
"xylem and phloem pattern formation" evidence=IMP] [GO:0010158
"abaxial cell fate specification" evidence=IMP] [GO:0048440 "carpel
development" evidence=IGI] [GO:0048481 "ovule development"
evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009943 "adaxial/abaxial
axis specification" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB005242 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 PROSITE:PS51293
GO:GO:0010051 GO:GO:0048481 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0009944
GO:GO:0009956 EMBL:AY030192 EMBL:AY037864 EMBL:AY048688
EMBL:BT026436 IPI:IPI00535955 RefSeq:NP_568334.1 UniGene:At.6466
UniGene:At.66763 ProteinModelPortal:Q93WJ9 SMR:Q93WJ9 IntAct:Q93WJ9
STRING:Q93WJ9 PRIDE:Q93WJ9 EnsemblPlants:AT5G16560.1 GeneID:831518
KEGG:ath:AT5G16560 TAIR:At5g16560 eggNOG:NOG330873
HOGENOM:HOG000241649 InParanoid:Q93WJ9 OMA:GINGNEV PhylomeDB:Q93WJ9
ProtClustDB:CLSN2917650 Genevestigator:Q93WJ9 Uniprot:Q93WJ9
Length = 403
Score = 204 (76.9 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 190 RMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTAR--HRP 247
RMRWT LH FV AV LGG ERATPK VL+LM+V++LT+ HVKSHLQ YRT + ++P
Sbjct: 221 RMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTNKP 280
Query: 248 E-SSEGTSEKK 257
SS+G+ E++
Sbjct: 281 AASSDGSGEEE 291
>TAIR|locus:2028346 [details] [associations]
symbol:KAN2 "AT1G32240" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048440 "carpel development" evidence=IGI] [GO:0048481 "ovule
development" evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
GO:GO:0048481 EMBL:AC084110 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009944
HOGENOM:HOG000241649 EMBL:AY048689 EMBL:BT029211 EMBL:AB493491
IPI:IPI00539948 RefSeq:NP_564392.1 UniGene:At.25340
ProteinModelPortal:Q9C616 SMR:Q9C616 STRING:Q9C616
EnsemblPlants:AT1G32240.1 GeneID:840116 KEGG:ath:AT1G32240
TAIR:At1g32240 eggNOG:NOG325874 InParanoid:Q9C616 OMA:SDVYENG
PhylomeDB:Q9C616 ProtClustDB:CLSN2715231 Genevestigator:Q9C616
Uniprot:Q9C616
Length = 388
Score = 203 (76.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 61/176 (34%), Positives = 85/176 (48%)
Query: 185 PANKS----RMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY 240
PA +S RMRWT LH FV AV LGG ERATPK VL+LM+V++LT+ HVKSHLQ Y
Sbjct: 206 PAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 265
Query: 241 RTAR--HRPESSEGTSEKKSNPTE-DMKSLDTKTTMSITEALRLQMEVQKRLHEQLEIQR 297
RT + + +S G S+ N + D S D M+ R E+ L + +
Sbjct: 266 RTVKTTDKAAASSGQSDVYENGSSGDNNSDDWMFDMN--RKSRDSEELTNPLEKSNGLWT 323
Query: 298 NLQLRIEEQGRHL----QMMFEQRKQMENEKSKASSSSLENPSAPLFESKQHSSPN 349
N G+ + ++M K+++ + S S E S+ PN
Sbjct: 324 NSSGEARLHGKLIDNVAEIMLPSEKELDGKCSSYERISSEEMSSSSISGTSPFKPN 379
>UNIPROTKB|Q0J235 [details] [associations]
symbol:RL9 "Probable transcription factor RL9"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IDA] [GO:0010158 "abaxial cell fate specification"
evidence=IMP] [GO:0010229 "inflorescence development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AP008215 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0010229
eggNOG:NOG330873 HOGENOM:HOG000241649 EMBL:AP005904 EMBL:FJ268747
EMBL:FJ268748 RefSeq:NP_001063097.1 UniGene:Os.5597 PRIDE:Q0J235
GeneID:4346973 KEGG:osa:4346973 Gramene:Q0J235 OMA:DALPWRH
ProtClustDB:CLSN2697690 Uniprot:Q0J235
Length = 532
Score = 204 (76.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 45/84 (53%), Positives = 56/84 (66%)
Query: 185 PANKS----RMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY 240
PA +S RMRWT LH FV AV LGG ERATPK VL+LM+V++LT+ HVKSHLQ Y
Sbjct: 317 PAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY 376
Query: 241 RTARH--RPESSEGTSEKKSNPTE 262
RT + +P +S G ++ S E
Sbjct: 377 RTVKSTDKPAASSGPADGGSGDEE 400
>TAIR|locus:2125771 [details] [associations]
symbol:AT4G04580 "AT4G04580" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AL161501 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AF074021 IPI:IPI00541303 PIR:G85057
RefSeq:NP_192367.1 UniGene:At.54143 ProteinModelPortal:Q9XEB2
SMR:Q9XEB2 EnsemblPlants:AT4G04580.1 GeneID:825790
KEGG:ath:AT4G04580 TAIR:At4g04580 eggNOG:NOG300503
HOGENOM:HOG000153846 InParanoid:Q9XEB2 OMA:RDLTISH PhylomeDB:Q9XEB2
ProtClustDB:CLSN2915807 ArrayExpress:Q9XEB2 Genevestigator:Q9XEB2
Uniprot:Q9XEB2
Length = 166
Score = 178 (67.7 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 38/106 (35%), Positives = 58/106 (54%)
Query: 186 ANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARH 245
++ RM WT +L F++ + +LGG E ATPK +L LM V +LTI HVKSHLQ YR +
Sbjct: 12 SDNPRMHWTDDLDIRFIQVIEKLGGEESATPKRILSLMGVRDLTISHVKSHLQMYRNKKK 71
Query: 246 RPESSEGTSEKKSNPTEDMKSLDT--KTTMSITEALRLQMEVQKRL 289
S E ++ + + L + T I RLQ++ +++
Sbjct: 72 EESSKEIKMMREMTQRQSQQYLQIYERATQFIQNQQRLQLDNTEKI 117
>TAIR|locus:2051572 [details] [associations]
symbol:AT2G06020 "AT2G06020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 EMBL:AC006413 IPI:IPI00525998 PIR:C84474
RefSeq:NP_178659.1 UniGene:At.52657 ProteinModelPortal:Q9ZPZ8
SMR:Q9ZPZ8 EnsemblPlants:AT2G06020.1 GeneID:815156
KEGG:ath:AT2G06020 TAIR:At2g06020 eggNOG:NOG275517
HOGENOM:HOG000154034 OMA:SKITPCI PhylomeDB:Q9ZPZ8
ProtClustDB:CLSN2912993 ArrayExpress:Q9ZPZ8 Genevestigator:Q9ZPZ8
Uniprot:Q9ZPZ8
Length = 301
Score = 181 (68.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 35/86 (40%), Positives = 55/86 (63%)
Query: 184 TPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTA 243
T K+R+RW+ +LH+ FV AV +LGG +ATPK V + M VE + ++HVKSHLQK+R
Sbjct: 82 TSDEKARLRWSSDLHDCFVNAVEKLGGPNKATPKSVKEAMEVEGIALHHVKSHLQKFRLG 141
Query: 244 RH--RPESSEGTSEKKSNPTEDMKSL 267
+ R +++ + +S P + + L
Sbjct: 142 KCNIRGGTNQYVRQSQSMPHKSQQQL 167
Score = 43 (20.2 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 18/60 (30%), Positives = 25/60 (41%)
Query: 370 ISAPEDSSASLNQKQKAPETK-----TGEEVDPDDDESGHKPVKRARSEATAFSPKSALG 424
++A +DSS S Q+ + ET T +E DP D V E + ALG
Sbjct: 240 LNALQDSSTSQTQETFSRETNLSSIVTRDEADPVDKYIDWNKVGETDIEHDSVEVLEALG 299
>TAIR|locus:2042927 [details] [associations]
symbol:AT2G38300 "AT2G38300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT004973
EMBL:AK117689 IPI:IPI00540370 RefSeq:NP_181364.2 UniGene:At.46670
ProteinModelPortal:Q8GYE4 SMR:Q8GYE4 IntAct:Q8GYE4 STRING:Q8GYE4
PRIDE:Q8GYE4 EnsemblPlants:AT2G38300.1 GeneID:818410
KEGG:ath:AT2G38300 TAIR:At2g38300 eggNOG:NOG310127
HOGENOM:HOG000090767 InParanoid:Q8GYE4 OMA:KDEEDRT PhylomeDB:Q8GYE4
ProtClustDB:CLSN2918908 Genevestigator:Q8GYE4 Uniprot:Q8GYE4
Length = 340
Score = 187 (70.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 35/55 (63%), Positives = 44/55 (80%)
Query: 190 RMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTAR 244
R+RWTP+LH FV AV RLGG ERATPK V ++MN++ L+I HVKSHLQ YR+ +
Sbjct: 56 RLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRSKK 110
>TAIR|locus:2063746 [details] [associations]
symbol:AT2G03500 "AT2G03500" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006284
HOGENOM:HOG000237574 EMBL:AY060559 EMBL:AY133630 EMBL:AK221662
IPI:IPI00544167 PIR:B84449 RefSeq:NP_027544.1 UniGene:At.27373
ProteinModelPortal:Q9ZQ85 SMR:Q9ZQ85 IntAct:Q9ZQ85
EnsemblPlants:AT2G03500.1 GeneID:814878 KEGG:ath:AT2G03500
TAIR:At2g03500 eggNOG:NOG301728 InParanoid:Q9ZQ85 OMA:QSYSMLL
PhylomeDB:Q9ZQ85 ProtClustDB:CLSN2687945 ArrayExpress:Q9ZQ85
Genevestigator:Q9ZQ85 Uniprot:Q9ZQ85
Length = 432
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 38/85 (44%), Positives = 52/85 (61%)
Query: 170 SNEEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLT 229
+N + V++ S + K+R W+P+LH FV+A+ LGG + ATPK + +LM V+ LT
Sbjct: 216 NNSNSNGVSSTTSQSN-RKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLT 274
Query: 230 IYHVKSHLQKYRTARHRPESSEGTS 254
VKSHLQKYR RP S TS
Sbjct: 275 NDEVKSHLQKYRLHTRRPSPSPQTS 299
>TAIR|locus:2031210 [details] [associations]
symbol:AT1G25550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237574
ProtClustDB:CLSN2687960 EMBL:AF326890 EMBL:AF339707 EMBL:AF372906
EMBL:BT002674 IPI:IPI00533337 RefSeq:NP_564236.1 UniGene:At.25159
ProteinModelPortal:Q9FPE8 SMR:Q9FPE8 IntAct:Q9FPE8 STRING:Q9FPE8
PRIDE:Q9FPE8 EnsemblPlants:AT1G25550.1 GeneID:839142
KEGG:ath:AT1G25550 TAIR:At1g25550 InParanoid:Q9FPE8 OMA:ECSERTT
PhylomeDB:Q9FPE8 ArrayExpress:Q9FPE8 Genevestigator:Q9FPE8
Uniprot:Q9FPE8
Length = 344
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 50/158 (31%), Positives = 64/158 (40%)
Query: 96 ESNTGDIASDDRAKRIEWWADQLISVEDGPEPNWSEVLADANVTDARQKVLKPSTDI-P- 153
E+N GD D + ++ W + +P EV A QK + D P
Sbjct: 114 ENNDGDKKKSDWLRSVQLWNQSPDPQPNNKKPMVIEVKRSAGAFQPFQKEKPKAADSQPL 173
Query: 154 ----TXXXXXXXXXXXXXXXSNEEFHAVANPLSMTPANKSRMRWTPELHEAFVEAVNRLG 209
T +EF S K R W+PELH F+ A+ +LG
Sbjct: 174 IKAITPTSTTTTSSTAETVGGGKEFEEQKQSHSN---RKQRRCWSPELHRRFLHALQQLG 230
Query: 210 GGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
G ATPK + LM V+ LT VKSHLQKYR RP
Sbjct: 231 GSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHTRRP 268
>TAIR|locus:2115070 [details] [associations]
symbol:AT4G37180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00537470
RefSeq:NP_849513.1 UniGene:At.4657 ProteinModelPortal:F4JRB0
SMR:F4JRB0 PRIDE:F4JRB0 EnsemblPlants:AT4G37180.2 GeneID:829872
KEGG:ath:AT4G37180 OMA:SCRNDET Uniprot:F4JRB0
Length = 363
Score = 159 (61.0 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 35/74 (47%), Positives = 43/74 (58%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRT-ARHR 246
+ R RW+ ELH FV+A++RLGG + ATPK + LM V+ LT VKSHLQKYR R
Sbjct: 217 EQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKH 276
Query: 247 PESSEGTSEKKSNP 260
P T P
Sbjct: 277 PLHPTKTLSSSDQP 290
>TAIR|locus:2026863 [details] [associations]
symbol:AT1G68670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0009737 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY063886
EMBL:AY091241 IPI:IPI00541260 RefSeq:NP_564938.1 UniGene:At.27154
ProteinModelPortal:Q8VZS3 SMR:Q8VZS3 IntAct:Q8VZS3
EnsemblPlants:AT1G68670.1 GeneID:843197 KEGG:ath:AT1G68670
TAIR:At1g68670 HOGENOM:HOG000237574 InParanoid:Q8VZS3 OMA:EHESSPE
PhylomeDB:Q8VZS3 ProtClustDB:CLSN2687960 ArrayExpress:Q8VZS3
Genevestigator:Q8VZS3 Uniprot:Q8VZS3
Length = 354
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/72 (44%), Positives = 42/72 (58%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
K R W+PELH F+ A+ +LGG ATPK + M V+ LT VKSHLQKYR RP
Sbjct: 215 KQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLHTRRP 274
Query: 248 ESSEGTSEKKSN 259
++ ++ N
Sbjct: 275 AATSVAAQSTGN 286
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 38/91 (41%), Positives = 58/91 (63%)
Query: 181 LSMTPAN--KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQ 238
L + P N KSR+ W+ ELH+ FV AVN+LG ++A PK +L+LMNV L+ +V SHLQ
Sbjct: 191 LLLDPGNSKKSRVVWSIELHQQFVNAVNKLGI-DKAVPKRILELMNVPGLSRENVASHLQ 249
Query: 239 KYRTARHR--PESSEGTSEKKSNPTEDMKSL 267
K+R R E+S+ + + E++++L
Sbjct: 250 KFRLYLKRLSGEASQSNDSESTKRYENIQAL 280
>TAIR|locus:2167639 [details] [associations]
symbol:GLK2 "AT5G44190" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP;IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009910 "negative regulation of flower
development" evidence=IGI] [GO:0010380 "regulation of chlorophyll
biosynthetic process" evidence=IGI] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009657
"plastid organization" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 EMBL:AB005239
GO:GO:0009658 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
PROSITE:PS51293 GO:GO:0009910 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237698 EMBL:AB062490 EMBL:AY026773 EMBL:AY028368
EMBL:AY050386 EMBL:AY124819 IPI:IPI00535889 RefSeq:NP_199232.1
UniGene:At.19638 ProteinModelPortal:Q9FFH0 SMR:Q9FFH0 STRING:Q9FFH0
EnsemblPlants:AT5G44190.1 GeneID:834442 KEGG:ath:AT5G44190
TAIR:At5g44190 eggNOG:NOG271712 InParanoid:Q9FFH0 OMA:QEMEGNT
PhylomeDB:Q9FFH0 ProtClustDB:CLSN2916711 Genevestigator:Q9FFH0
Uniprot:Q9FFH0
Length = 386
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTAR 244
K ++ WTPELH FV+AV +LG ++A P +L++MNV++LT ++V SHLQKYR+ R
Sbjct: 147 KPKVDWTPELHRKFVQAVEQLGV-DKAVPSRILEIMNVKSLTRHNVASHLQKYRSHR 202
>TAIR|locus:2058445 [details] [associations]
symbol:MYBC1 "AT2G40970" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004261
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002409 EMBL:AY072381
EMBL:BT000098 IPI:IPI00539516 PIR:T00761 RefSeq:NP_181630.1
UniGene:At.27776 ProteinModelPortal:O22210 SMR:O22210
EnsemblPlants:AT2G40970.1 GeneID:818697 KEGG:ath:AT2G40970
TAIR:At2g40970 eggNOG:NOG255246 HOGENOM:HOG000238691
InParanoid:O22210 OMA:RYEDSEY PhylomeDB:O22210
ProtClustDB:CLSN2913178 ArrayExpress:O22210 Genevestigator:O22210
Uniprot:O22210
Length = 248
Score = 151 (58.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
+ R+ WTP+LH+ FV+AV LG + A PK +++LM+VE LT +V SHLQKYR R
Sbjct: 105 RPRLVWTPQLHKRFVDAVGHLGI-KNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRM 163
Query: 248 ESSEG 252
+ G
Sbjct: 164 QGGNG 168
>TAIR|locus:2010297 [details] [associations]
symbol:AT1G49560 "AT1G49560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011807 EMBL:AK221631
IPI:IPI00546952 PIR:B96532 RefSeq:NP_564549.1 UniGene:At.38204
ProteinModelPortal:Q9FX84 SMR:Q9FX84 EnsemblPlants:AT1G49560.1
GeneID:841380 KEGG:ath:AT1G49560 TAIR:At1g49560 InParanoid:Q9FX84
OMA:SSMEDVE PhylomeDB:Q9FX84 ProtClustDB:CLSN2917204
Genevestigator:Q9FX84 Uniprot:Q9FX84
Length = 333
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 36/78 (46%), Positives = 45/78 (57%)
Query: 181 LSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY 240
L K R W PELH FV+A+ +LGG ATPK + + M E LT VKSHLQKY
Sbjct: 185 LKQQALRKQRRCWNPELHRRFVDALQQLGGPGVATPKQIREHMQEEGLTNDEVKSHLQKY 244
Query: 241 RTARHRPESSEGTSEKKS 258
R +P S+ +EK+S
Sbjct: 245 RLHIRKPNSN---AEKQS 259
>TAIR|locus:2085984 [details] [associations]
symbol:AT3G25790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
EMBL:AB028607 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237574 ProtClustDB:CLSN2687791 IPI:IPI00546166
RefSeq:NP_566778.1 UniGene:At.37325 ProteinModelPortal:Q9LS00
SMR:Q9LS00 EnsemblPlants:AT3G25790.1 GeneID:822170
KEGG:ath:AT3G25790 TAIR:At3g25790 InParanoid:Q9LS00 OMA:AYKREIS
PhylomeDB:Q9LS00 Genevestigator:Q9LS00 Uniprot:Q9LS00
Length = 357
Score = 155 (59.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
K+R W+ ELH F+ A+ +LGG ATPK + +M V+ LT VKSHLQKYR RP
Sbjct: 196 KNRRCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTNDEVKSHLQKYRLHARRP 255
Query: 248 ESSEGTSEKKSNPTE 262
S+ T +++ T+
Sbjct: 256 --SQTTPNNRNSQTQ 268
>UNIPROTKB|Q5Z5I4 [details] [associations]
symbol:GLK1 "Probable transcription factor GLK1"
species:39947 "Oryza sativa Japonica Group" [GO:0010638 "positive
regulation of organelle organization" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IGI]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 EMBL:AP008212 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AP005688 EMBL:AK061946 EMBL:AK065184
EMBL:AK098909 EMBL:AK122161 RefSeq:NP_001057583.2 UniGene:Os.3340
ProteinModelPortal:Q5Z5I4 STRING:Q5Z5I4
EnsemblPlants:LOC_Os06g24070.1 GeneID:4340977 KEGG:osa:4340977
Gramene:Q5Z5I4 eggNOG:NOG283574 HOGENOM:HOG000237698 OMA:IDSLTRH
ProtClustDB:CLSN2696175 GO:GO:0010638 Uniprot:Q5Z5I4
Length = 455
Score = 154 (59.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 128 NWSEVLADANVTDARQKVLKPSTDIPTXXXXXXXXXXXXXXXSNEEFHAVANPLSMTPAN 187
N + +ANV D V S+ P+ S++ H
Sbjct: 130 NQDDDAGEANVDDGAAAVEAKSSS-PSSTTSSSQEAESRHKSSSKSSHG---------KK 179
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTAR 244
K+++ WTPELH FV+AV +LG ++A P +L++M +++LT +++ SHLQKYR+ R
Sbjct: 180 KAKVDWTPELHRRFVQAVEQLGI-DKAVPSRILEIMGIDSLTRHNIASHLQKYRSHR 235
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYR 241
K R+ WT ELH+ FV AVN+LG E+A PK +L LMNVE LT +V SHLQK+R
Sbjct: 195 KQRVVWTVELHKKFVAAVNQLGY-EKAMPKKILDLMNVEKLTRENVASHLQKFR 247
>TAIR|locus:2175364 [details] [associations]
symbol:AT5G05090 "AT5G05090" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AB005245 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY093188
EMBL:BT006289 IPI:IPI00523871 RefSeq:NP_196128.1 UniGene:At.33034
ProteinModelPortal:Q9FF65 SMR:Q9FF65 PRIDE:Q9FF65
EnsemblPlants:AT5G05090.1 GeneID:830391 KEGG:ath:AT5G05090
TAIR:At5g05090 InParanoid:Q9FF65 OMA:MREEDSN PhylomeDB:Q9FF65
ProtClustDB:CLSN2716677 ArrayExpress:Q9FF65 Genevestigator:Q9FF65
Uniprot:Q9FF65
Length = 266
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
+ R+ WTP+LH+ FV+AV LG + A PK +++LM+V+ LT +V SHLQKYR R
Sbjct: 81 RPRLVWTPQLHKRFVDAVAHLGI-KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM 139
Query: 248 ESSEG 252
+S G
Sbjct: 140 KSGGG 144
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 33/60 (55%), Positives = 40/60 (66%)
Query: 184 TPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTA 243
T K R+ WT ELH F+ AV+ LG ERA PK +L LMNV+ LT +V SHLQK+R A
Sbjct: 179 TAQKKPRVLWTHELHNKFLAAVDHLGV-ERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237
>TAIR|locus:2103247 [details] [associations]
symbol:AT3G10760 "AT3G10760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AC011708 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000238691 ProtClustDB:CLSN2716677
IPI:IPI00530545 RefSeq:NP_187687.1 UniGene:At.39869
ProteinModelPortal:Q9SG82 SMR:Q9SG82 PRIDE:Q9SG82
EnsemblPlants:AT3G10760.1 GeneID:820245 KEGG:ath:AT3G10760
TAIR:At3g10760 eggNOG:NOG312708 InParanoid:Q9SG82 OMA:FARWEEE
PhylomeDB:Q9SG82 Genevestigator:Q9SG82 Uniprot:Q9SG82
Length = 335
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
+ R+ WTP+LH+ FV+AV LG + A PK +++LM+V+ LT +V SHLQKYR R
Sbjct: 105 RPRLVWTPQLHKRFVDAVAHLGI-KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM 163
Query: 248 ESSEGTSEKKSNPTED 263
+ S+P D
Sbjct: 164 QGLSSGGGAGSDPATD 179
>TAIR|locus:2148348 [details] [associations]
symbol:BOA "AT5G59570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009909 "regulation of flower development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB025604
GO:GO:0009909 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT026065 EMBL:AK117348
EMBL:AB206577 IPI:IPI00538187 RefSeq:NP_200765.1 UniGene:At.29219
ProteinModelPortal:Q9LTH4 SMR:Q9LTH4 STRING:Q9LTH4
EnsemblPlants:AT5G59570.1 GeneID:836076 KEGG:ath:AT5G59570
TAIR:At5g59570 InParanoid:Q9LTH4 OMA:ERSRTIH PhylomeDB:Q9LTH4
ProtClustDB:CLSN2685121 Genevestigator:Q9LTH4 Uniprot:Q9LTH4
Length = 298
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 186 ANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYR 241
+ + R+ WTP+LH+ FV+ V LG + A PK +++LMNVE LT +V SHLQKYR
Sbjct: 139 SKRPRLVWTPQLHKRFVDVVAHLGI-KNAVPKTIMQLMNVEGLTRENVASHLQKYR 193
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/72 (50%), Positives = 46/72 (63%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
K R+ W+ ELH+ FV AVN+LG E+A PK +L+LMNV LT +V SHLQKYR R
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLGV-EKAVPKKILELMNVPGLTRENVASHLQKYRIYLRR- 294
Query: 248 ESSEGTSEKKSN 259
G S+ + N
Sbjct: 295 --LGGVSQHQGN 304
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYR 241
KSR+ WT +LH F+ AVN LG ++A PK +L +M V++LT V SHLQKYR
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGE-DKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 145 (56.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYR 241
KSR+ WT +LH F+ AVN LG ++A PK +L +M V++LT V SHLQKYR
Sbjct: 198 KSRLTWTTQLHRQFIAAVNHLGE-DKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 148 (57.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 182 SMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYR 241
S + + K+R+ W+ ELH FV AVN++G +A PK +L LMNV LT +V SHLQKYR
Sbjct: 187 SSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYR 246
Query: 242 TARHRPESSE 251
R E +
Sbjct: 247 LYLSRLEKGK 256
>TAIR|locus:2205339 [details] [associations]
symbol:HRS1 "HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY
ROOT SHORTENING 1" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016036 "cellular response to
phosphate starvation" evidence=IMP] [GO:0080022 "primary root
development" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC011810
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0080022 GO:GO:0016036 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237574 EMBL:AF367336 EMBL:AY124865
IPI:IPI00529437 PIR:F86267 RefSeq:NP_563926.1 UniGene:At.20366
ProteinModelPortal:Q9FX67 SMR:Q9FX67 STRING:Q9FX67
EnsemblPlants:AT1G13300.1 GeneID:837890 KEGG:ath:AT1G13300
TAIR:At1g13300 eggNOG:NOG274505 InParanoid:Q9FX67 OMA:TRDESMR
PhylomeDB:Q9FX67 ProtClustDB:CLSN2687791 Genevestigator:Q9FX67
Uniprot:Q9FX67
Length = 344
Score = 144 (55.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
K R W+ +LH F+ A+ LGG ATPK + + M V+ LT VKSHLQKYR RP
Sbjct: 181 KQRRCWSSQLHRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYRLHTRRP 240
Query: 248 ESS 250
+
Sbjct: 241 RQT 243
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 146 (56.5 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 34/72 (47%), Positives = 46/72 (63%)
Query: 188 KSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKYRTARHRP 247
K R+ W+ ELH+ FV AVN+LG ++A PK +L++MNV LT +V SHLQKYR R
Sbjct: 216 KPRVVWSVELHQQFVAAVNQLGV-DKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRR- 273
Query: 248 ESSEGTSEKKSN 259
G S+ + N
Sbjct: 274 --LGGVSQHQGN 283
>TAIR|locus:2141020 [details] [associations]
symbol:APRR2 species:3702 "Arabidopsis thaliana"
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
Uniprot:Q6LA43
Length = 535
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 181 LSMTPANKSRMRWTPELHEAFVEAVNRLGGGERATPKGVLKLMNVENLTIYHVKSHLQKY 240
+S ++ ++ WTPELH+ FV+AV +LG ++A P +L+LM V LT ++V SHLQK+
Sbjct: 289 VSGNKTSRKKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVGTLTRHNVASHLQKF 347
Query: 241 RTARHR 246
R +HR
Sbjct: 348 R--QHR 351
>DICTYBASE|DDB_G0270760 [details] [associations]
symbol:DDB_G0270760 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0270760 EMBL:AAFI02000005 RefSeq:XP_646635.1
GeneID:8617607 KEGG:ddi:DDB_G0270760 Uniprot:Q55C46
Length = 991
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 36/141 (25%), Positives = 68/141 (48%)
Query: 257 KSNPTEDMKSLDTKTTMSITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRHLQMMFEQ 316
K++ T + T T ITE + +E Q++ +Q + Q+ Q + ++Q + Q +Q
Sbjct: 802 KTSTTTTTSTTITNTVTIITEKDTISLEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 861
Query: 317 RKQMENEKSKASSSSLENPSAPLFESKQHSS--PNETSMATELDVAKTGADTSHVISAPE 374
++Q E E+ + SLEN + P SK+ S T+ A L AK T+ +++ +
Sbjct: 862 QQQQEQEQEQQQQKSLENCTLPPSPSKETISIITTTTTTAVILQEAKQQQQTTSSLTSID 921
Query: 375 DSSASLNQKQKAPETKTGEEV 395
+ S + T+ G++V
Sbjct: 922 KTIISDEDHNSSEGTEEGDDV 942
>UNIPROTKB|G1LTM7 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9646
"Ailuropoda melanoleuca" [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=ISS] [GO:0001947 "heart looping" evidence=ISS]
[GO:0002092 "positive regulation of receptor internalization"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0005814
"centriole" evidence=ISS] [GO:0005911 "cell-cell junction"
evidence=ISS] [GO:0005912 "adherens junction" evidence=ISS]
[GO:0005929 "cilium" evidence=ISS] [GO:0005932 "microtubule basal
body" evidence=ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0007417
"central nervous system development" evidence=ISS] [GO:0010842
"retina layer formation" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030862 "positive
regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0030902 "hindbrain development" evidence=ISS]
[GO:0031513 "nonmotile primary cilium" evidence=ISS] [GO:0034613
"cellular protein localization" evidence=ISS] [GO:0035844 "cloaca
development" evidence=ISS] [GO:0035845 "photoreceptor cell outer
segment organization" evidence=ISS] [GO:0039008 "pronephric nephron
tubule morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0043066 GO:GO:0034613 GO:GO:0005814 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795 GO:GO:0045944
GO:GO:0005911 GO:GO:0007169 GO:GO:0005912 GO:GO:0033365 OMA:FKGIPIS
GO:GO:0005932 GO:GO:0042384 GO:GO:0035844 GO:GO:0001947
GO:GO:0030902 GO:GO:0070121 GO:GO:0070986 GO:GO:0001738
GO:GO:0071599 GO:GO:0035845 GO:GO:0030862 GO:GO:0002092
GO:GO:0039023 GO:GO:0039008 GO:GO:0010842 GO:GO:0065001
GO:GO:0031513 GeneTree:ENSGT00530000063479 EMBL:ACTA01002374
Ensembl:ENSAMET00000010877 Uniprot:G1LTM7
Length = 1036
Score = 120 (47.3 bits), Expect = 0.00092, P = 0.00092
Identities = 65/264 (24%), Positives = 112/264 (42%)
Query: 179 NPLSMTPANKSRMRWTPELHE----AFVEAVNRLGGGERATPKGVLKL----MNVENLTI 230
NP P KS++R P + E VE +R G + K VL++ M +E +
Sbjct: 89 NPEKSMPVTKSKLRNLPSMPENPDDVSVEE-DRQGKARKKVMKTVLQMTAQGMELET-PV 146
Query: 231 YHVKSHLQKYRTARHRPESSEGTSEKKSNPTEDMKSLDTKTTMSITE---ALRLQMEVQK 287
V S QK RT R +P + SEK E+ ++ + M + + A + E++K
Sbjct: 147 KKVDSTHQKART-RSQPGVAHQKSEKADEERENNNLVEEEELMQVYQLQVAEEMAKEIKK 205
Query: 288 RLHEQLEIQRNLQLRIEEQGRHLQMMFEQRKQMENEK----SKASSSSLENPSAPLFESK 343
++ ++L+ Q L + H + ++K + +K SKA +S L + +
Sbjct: 206 KIRKKLKEQ--LTYFPSDTSLHDGKLNSEKKIKKKKKVPISSKAETSILTISDDTVESEE 263
Query: 344 QHSSPNETSMATELDVAKTGADTSHVISAPEDSSASLNQKQKAPETKTGEEVDPDDDESG 403
+ SP T + K + +V + +D + S K+K +TKT + + D D G
Sbjct: 264 KKRSPVRTVTSDSHQDDKISSMEDNVEDSMQDDTKS-KPKKKKKKTKTVSDDNEDADGDG 322
Query: 404 HKPVKRARSEATAFSPKSALGNTL 427
V S + PK L + L
Sbjct: 323 ---VHEVTSRDSPVYPKCLLDDDL 343
>UNIPROTKB|D2H0U8 [details] [associations]
symbol:PANDA_003072 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0001738 "morphogenesis of
a polarized epithelium" evidence=ISS] [GO:0001947 "heart looping"
evidence=ISS] [GO:0002092 "positive regulation of receptor
internalization" evidence=ISS] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005814 "centriole" evidence=ISS] [GO:0005911
"cell-cell junction" evidence=ISS] [GO:0005912 "adherens junction"
evidence=ISS] [GO:0005929 "cilium" evidence=ISS] [GO:0005932
"microtubule basal body" evidence=ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0007417 "central nervous system development" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030862 "positive
regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0030902 "hindbrain development" evidence=ISS]
[GO:0031513 "nonmotile primary cilium" evidence=ISS] [GO:0034613
"cellular protein localization" evidence=ISS] [GO:0035844 "cloaca
development" evidence=ISS] [GO:0035845 "photoreceptor cell outer
segment organization" evidence=ISS] [GO:0039008 "pronephric nephron
tubule morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
Pfam:PF00018 InterPro:IPR017986 InterPro:IPR001452
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00326 GO:GO:0043066 GO:GO:0034613 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795
GO:GO:0045944 GO:GO:0005911 GO:GO:0007169 SUPFAM:SSF50044
GO:GO:0005912 GO:GO:0005932 GO:GO:0042384 GO:GO:0035844
GO:GO:0001947 GO:GO:0030902 GO:GO:0070121 GO:GO:0070986
GO:GO:0001738 GO:GO:0071599 GO:GO:0035845 GO:GO:0030862
GO:GO:0002092 GO:GO:0039023 GO:GO:0039008 GO:GO:0010842
GO:GO:0065001 HOGENOM:HOG000033864 GO:GO:0031513 EMBL:GL192415
ProteinModelPortal:D2H0U8 Uniprot:D2H0U8
Length = 1084
Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00097
Identities = 65/264 (24%), Positives = 112/264 (42%)
Query: 179 NPLSMTPANKSRMRWTPELHE----AFVEAVNRLGGGERATPKGVLKL----MNVENLTI 230
NP P KS++R P + E VE +R G + K VL++ M +E +
Sbjct: 25 NPEKSMPVTKSKLRNLPSMPENPDDVSVEE-DRQGKARKKVMKTVLQMTAQGMELET-PV 82
Query: 231 YHVKSHLQKYRTARHRPESSEGTSEKKSNPTEDMKSLDTKTTMSITE---ALRLQMEVQK 287
V S QK RT R +P + SEK E+ ++ + M + + A + E++K
Sbjct: 83 KKVDSTHQKART-RSQPGVAHQKSEKADEERENNNLVEEEELMQVYQLQVAEEMAKEIKK 141
Query: 288 RLHEQLEIQRNLQLRIEEQGRHLQMMFEQRKQMENEK----SKASSSSLENPSAPLFESK 343
++ ++L+ Q L + H + ++K + +K SKA +S L + +
Sbjct: 142 KIRKKLKEQ--LTYFPSDTSLHDGKLNSEKKIKKKKKVPISSKAETSILTISDDTVESEE 199
Query: 344 QHSSPNETSMATELDVAKTGADTSHVISAPEDSSASLNQKQKAPETKTGEEVDPDDDESG 403
+ SP T + K + +V + +D + S K+K +TKT + + D D G
Sbjct: 200 KKRSPVRTVTSDSHQDDKISSMEDNVEDSMQDDTKS-KPKKKKKKTKTVSDDNEDADGDG 258
Query: 404 HKPVKRARSEATAFSPKSALGNTL 427
V S + PK L + L
Sbjct: 259 ---VHEVTSRDSPVYPKCLLDDDL 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.307 0.123 0.345 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 427 412 0.00080 118 3 11 23 0.38 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 611 (65 KB)
Total size of DFA: 252 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.81u 0.12s 49.93t Elapsed: 00:00:02
Total cpu time: 49.82u 0.12s 49.94t Elapsed: 00:00:02
Start: Tue May 21 07:50:57 2013 End: Tue May 21 07:50:59 2013