BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014311
(427 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225454196|ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis
vinifera]
Length = 379
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/379 (67%), Positives = 307/379 (81%), Gaps = 2/379 (0%)
Query: 49 LAKSLTSTRKCRGGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKD 108
++KS T R G +RC +Q + DDGFYMRRCVELA KA+G TSPNPMVGCVIVKD
Sbjct: 1 MSKSQTGLRSYGGLVSVRCEALQGKE-DDGFYMRRCVELARKAIGCTSPNPMVGCVIVKD 59
Query: 109 GKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVK 168
GK+VGEGFHPKAGQPH EVFALRDAG+LAE ATAYVSLEPCNHYGRTPPCTEALIKAKVK
Sbjct: 60 GKVVGEGFHPKAGQPHGEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIKAKVK 119
Query: 169 KVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYT 228
KVV+GM+DPNPIV SKG++RLRDAGI+VTV VE+ELCK+LNEA+IH+++TGKPF TLRY+
Sbjct: 120 KVVIGMVDPNPIVASKGVDRLRDAGIEVTVAVEEELCKKLNEAYIHQMLTGKPFVTLRYS 179
Query: 229 LSVNGHVLDQLGEGVAESGGYYSQLLQEYDAIILSASS-TKKYSIPASQEPDANQPFRII 287
LS+NGH+LDQLGEGV E+GGYYSQL+QEYDAIILS ++ T+K+S PASQEP ANQP I+
Sbjct: 180 LSINGHILDQLGEGVEEAGGYYSQLVQEYDAIILSPTTVTEKFSFPASQEPGANQPLHIL 239
Query: 288 TVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYS 347
+ SP +IP E++SKVI+F D E VEP+M KGIETV L Q+NL AVL+YC
Sbjct: 240 IAKSPISPNQIPIPHTEATSKVIIFADNETAVEPEMVQKGIETVVLDQINLNAVLEYCKR 299
Query: 348 HGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRL 407
G CS+L+DLRGN+G E LLK+ +E+NLLQK+VVEVLP W+ ++ L +L K +
Sbjct: 300 QGLCSILLDLRGNFGYFEDLLKQSLEENLLQKVVVEVLPFWSTNEEEGLPLALKNLRKGI 359
Query: 408 ILKNLQPKMSSQSIVLEGY 426
LKN+ + S+ S+VLEGY
Sbjct: 360 RLKNITSRNSNDSVVLEGY 378
>gi|224067884|ref|XP_002302581.1| predicted protein [Populus trichocarpa]
gi|222844307|gb|EEE81854.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 251/350 (71%), Positives = 296/350 (84%), Gaps = 1/350 (0%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
FYMRRCVELA KA+G TSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA +LAE
Sbjct: 29 FYMRRCVELARKAIGCTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAEDLAE 88
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
ATAYVSLEPCNHYGRTPPC+EAL+KAKVKKVV+GM+DPNPIV S+G++RLRDAGI+V V
Sbjct: 89 NATAYVSLEPCNHYGRTPPCSEALVKAKVKKVVIGMIDPNPIVASRGVQRLRDAGINVVV 148
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYD 258
GVE+ELCKRLNEAFIH+++TG PF TLRY+LSVNGH+++QLGEGV ++GGYYSQLLQEYD
Sbjct: 149 GVEEELCKRLNEAFIHKMLTGSPFVTLRYSLSVNGHLVNQLGEGVTDTGGYYSQLLQEYD 208
Query: 259 AIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDGEIT 318
A+ILSAS T PASQEP ANQP I+ +SPI+IP L+EE++SKV +FTD E +
Sbjct: 209 AVILSASLTGSSPFPASQEPGANQPLWILMAGGPSSPIQIPLLTEEAASKVTIFTDKEAS 268
Query: 319 VEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQ 378
EP+ KGIETV L ++NL A+L+YC S G CSVL+DLRG++ +LE LLK+G EQNLLQ
Sbjct: 269 EEPETSKKGIETVVLDKINLNAILEYCKSRGLCSVLMDLRGSFVELEELLKDGTEQNLLQ 328
Query: 379 KIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMS-SQSIVLEGYL 427
KIVVEVLP W+ S G + T S+ +RL + NLQPK+S QSIVLEGYL
Sbjct: 329 KIVVEVLPFWDESSGLSSLTASKSIRRRLKVNNLQPKISGDQSIVLEGYL 378
>gi|297745271|emb|CBI40351.3| unnamed protein product [Vitis vinifera]
Length = 348
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 241/347 (69%), Positives = 289/347 (83%), Gaps = 1/347 (0%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
MRRCVELA KA+G TSPNPMVGCVIVKDGK+VGEGFHPKAGQPH EVFALRDAG+LAE A
Sbjct: 1 MRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFHPKAGQPHGEVFALRDAGDLAENA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYVSLEPCNHYGRTPPCTEALIKAKVKKVV+GM+DPNPIV SKG++RLRDAGI+VTV V
Sbjct: 61 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKGVDRLRDAGIEVTVAV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAI 260
E+ELCK+LNEA+IH+++TGKPF TLRY+LS+NGH+LDQLGEGV E+GGYYSQL+QEYDAI
Sbjct: 121 EEELCKKLNEAYIHQMLTGKPFVTLRYSLSINGHILDQLGEGVEEAGGYYSQLVQEYDAI 180
Query: 261 ILSASS-TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDGEITV 319
ILS ++ T+K+S PASQEP ANQP I+ + SP +IP E++SKVI+F D E V
Sbjct: 181 ILSPTTVTEKFSFPASQEPGANQPLHILIAKSPISPNQIPIPHTEATSKVIIFADNETAV 240
Query: 320 EPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQK 379
EP+M KGIETV L Q+NL AVL+YC G CS+L+DLRGN+G E LLK+ +E+NLLQK
Sbjct: 241 EPEMVQKGIETVVLDQINLNAVLEYCKRQGLCSILLDLRGNFGYFEDLLKQSLEENLLQK 300
Query: 380 IVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEGY 426
+VVEVLP W+ ++ L +L K + LKN+ + S+ S+VLEGY
Sbjct: 301 VVVEVLPFWSTNEEEGLPLALKNLRKGIRLKNITSRNSNDSVVLEGY 347
>gi|356506247|ref|XP_003521898.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
Length = 425
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/368 (62%), Positives = 285/368 (77%), Gaps = 2/368 (0%)
Query: 62 GYRIRCGQVQ-NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKA 120
G R++C ND DDGFY+RRCVELA KAVG TSPNP+VGCVIVKDGK+VGEGFHPKA
Sbjct: 56 GLRVQCAASNGENDDDDGFYIRRCVELARKAVGFTSPNPLVGCVIVKDGKVVGEGFHPKA 115
Query: 121 GQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPI 180
GQPHAEVFALRDAG+LA+ ATAYVSLEPCNH+GRTPPCTEALIKAKVKKVVVGM+DPNPI
Sbjct: 116 GQPHAEVFALRDAGDLAQSATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPI 175
Query: 181 VNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLG 240
V KG+ERLRDAGI+V VGVE+ELCK LNE +IHR++TGKPF TLRY+LSVNG+ LD LG
Sbjct: 176 VAFKGVERLRDAGIEVIVGVEEELCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFLDLLG 235
Query: 241 EGVAESGGYYSQLLQEYDAIILSAS-STKKYSIPASQEPDANQPFRIITVSNHASPIRIP 299
GV + GGY+S+LLQEYDA+++S+S ++ S+PASQEP ANQP RII + S +I
Sbjct: 236 NGVTDCGGYHSRLLQEYDAVVISSSLFSENLSVPASQEPGANQPIRIIIHKDPGSSKQIQ 295
Query: 300 GLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
+ KVI+FTD + P++ +GIE V L Q+NL +LDYC G CSVL+D+RG
Sbjct: 296 LAINGVTGKVIIFTDNKTVTAPEVAQQGIEIVVLDQINLDVILDYCNCQGLCSVLLDIRG 355
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQ 419
++G+ E L+KEGI++N + K V E+LPVW+G +P L S + L + NL+ S Q
Sbjct: 356 SFGEFEELVKEGIKKNYINKFVTEILPVWDGLAEPDPLQTLKSSEQGLKVVNLKSMASDQ 415
Query: 420 SIVLEGYL 427
S+V+EGY
Sbjct: 416 SVVIEGYF 423
>gi|356522624|ref|XP_003529946.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
Length = 424
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/374 (63%), Positives = 293/374 (78%), Gaps = 5/374 (1%)
Query: 59 CRG---GYRIRC-GQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGE 114
CR G R++C G ND DDGFY+RRCVELA KAVG TSPNP+VGCVIVKDGK+VG+
Sbjct: 49 CRSRCDGLRVQCAGSNGENDDDDGFYIRRCVELARKAVGFTSPNPLVGCVIVKDGKVVGQ 108
Query: 115 GFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGM 174
GFHPKAGQPHAEVFALRDAG+LA+ ATAYVSLEPCNH+GRTPPCTEALIKAKVKKVVVGM
Sbjct: 109 GFHPKAGQPHAEVFALRDAGDLAQSATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGM 168
Query: 175 LDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGH 234
+DPNPIV KG+ERLRDAGI+V VGVE+ELCK LNE +IHR++TGKPF TLRY+LSVNG+
Sbjct: 169 VDPNPIVAFKGVERLRDAGIEVVVGVEEELCKSLNEPYIHRMLTGKPFLTLRYSLSVNGN 228
Query: 235 VLDQLGEGVAESGGYYSQLLQEYDAIILSAS-STKKYSIPASQEPDANQPFRIITVSNHA 293
+D LG+GV + GGYYS+LLQEYDA+++S+S ++ S+PASQEP ANQP RII + +
Sbjct: 229 FMDLLGDGVTDCGGYYSRLLQEYDAVVISSSLFSENLSVPASQEPGANQPIRIILHKDPS 288
Query: 294 SPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSV 353
S +IP + KVI+FTD + P++ +GIETV L Q+NL +LDYC G CSV
Sbjct: 289 SSNQIPLAINGVTHKVIIFTDNKTVTAPEVAQQGIETVALDQINLDVILDYCNRQGLCSV 348
Query: 354 LVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQ 413
L+D+RG++G+ E L+KEGI++N + K V E+LPVWNG +P L SL + + NL+
Sbjct: 349 LLDIRGSFGEFEDLVKEGIKKNYINKFVTEILPVWNGHTEPDPLHTLKSLEQGAEVVNLK 408
Query: 414 PKMSSQSIVLEGYL 427
K S +S+V+EGY
Sbjct: 409 SKASDKSVVIEGYF 422
>gi|449524924|ref|XP_004169471.1| PREDICTED: LOW QUALITY PROTEIN: riboflavin biosynthesis protein
RibD-like [Cucumis sativus]
Length = 425
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/419 (55%), Positives = 301/419 (71%), Gaps = 18/419 (4%)
Query: 18 LSPCRIFYPTSSPTLAF-NQNSTFGFCN----SLKRLAKSLTSTRKCRGGYRIRCGQVQN 72
L+P SP + + N N F C+ + + + + CRGG+ +RC V
Sbjct: 16 LTPPTTLNDVHSPLIYYRNHNDKFRLCDCSRSRVSSSVQWIVKSGSCRGGHSVRCVNVIQ 75
Query: 73 N---DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
D DD YMRR +E+A KA+G TSPNPMVGCVIVK+G+IVGEGFHPKAGQPHAEVFA
Sbjct: 76 GVHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFA 135
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
LR+AG LAE ATAYV+LEPCNHYGRTPPCTEALIKAKVK+VVVGM+DPNPIV SKG++RL
Sbjct: 136 LREAGSLAENATAYVTLEPCNHYGRTPPCTEALIKAKVKRVVVGMVDPNPIVASKGVQRL 195
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
RDAGIDVTV +E++ CK+LNEA+IH+I+TGKP TLRYTLS+NG LDQ+G+G AE+GGY
Sbjct: 196 RDAGIDVTVSIEEDSCKKLNEAYIHKILTGKPLLTLRYTLSLNGCFLDQVGKGAAEAGGY 255
Query: 250 YSQLLQEYDAIILS-ASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
YSQLLQEY+A+I+S SS++++ IP+S E A QP II +S+ I +P ++ + ++K
Sbjct: 256 YSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWII-LSSPDGLITVPRIT-DPTTK 313
Query: 309 VIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V++FT+ E+ V + IETV L QLN+ +L+YC S G SV+ D+R G E L+
Sbjct: 314 VVIFTNKEVVV----SEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVRAKLGVHEELI 369
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
KEGIE+ LLQK+VVEVLP W+ S T S+ + L LK L+P+M S+VLE L
Sbjct: 370 KEGIEEKLLQKVVVEVLPQWSESQS---ETWFKSMAENLKLKCLEPRMCGPSVVLEANL 425
>gi|449441472|ref|XP_004138506.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Cucumis
sativus]
Length = 425
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/419 (55%), Positives = 301/419 (71%), Gaps = 18/419 (4%)
Query: 18 LSPCRIFYPTSSPTLAF-NQNSTFGFCN----SLKRLAKSLTSTRKCRGGYRIRCGQVQN 72
L+P SP + + N N F C+ + + + + CRGG+ +RC V
Sbjct: 16 LTPPTTLNDVHSPLIYYRNHNDKFRLCDCSRSRVSSSVQWIVKSGSCRGGHSVRCVNVIQ 75
Query: 73 N---DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
D DD YMRR +E+A KA+G TSPNPMVGCVIVK+G+IVGEGFHPKAGQPHAEVFA
Sbjct: 76 GVHCDVDDEVYMRRSLEIARKAIGHTSPNPMVGCVIVKNGEIVGEGFHPKAGQPHAEVFA 135
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
LR+AG LAE ATAYV+LEPCNHYGRTPPCTEALIKAKVK+VVVGM+DPNPIV SKG++RL
Sbjct: 136 LREAGSLAENATAYVTLEPCNHYGRTPPCTEALIKAKVKRVVVGMVDPNPIVASKGVQRL 195
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
RDAGIDVTV +E++ CK+LNEA+IH+I+TGKP TLRYTLS+NG LDQ+G+G AE+GGY
Sbjct: 196 RDAGIDVTVSIEEDSCKKLNEAYIHQILTGKPLLTLRYTLSLNGCFLDQVGKGAAEAGGY 255
Query: 250 YSQLLQEYDAIILS-ASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
YSQLLQEY+A+I+S SS++++ IP+S E A QP II +S+ I +P ++ + ++K
Sbjct: 256 YSQLLQEYNAVIISPPSSSEEFEIPSSNEHGAKQPLWII-LSSPDGLITVPRIT-DPTTK 313
Query: 309 VIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V++FT+ E+ V + IETV L QLN+ +L+YC S G SV+ D+R G E L+
Sbjct: 314 VVIFTNKEVVV----SEREIETVVLDQLNMNNILNYCQSQGLNSVMWDVRAKLGVHEELI 369
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
KEGIE+ LLQK+VVEVLP W+ S T S+ + L LK L+P+M S+VLE L
Sbjct: 370 KEGIEEKLLQKVVVEVLPQWSESQS---ETWFKSMAENLKLKCLEPRMCGPSVVLEANL 425
>gi|297804068|ref|XP_002869918.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297315754|gb|EFH46177.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 426
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/415 (57%), Positives = 302/415 (72%), Gaps = 28/415 (6%)
Query: 22 RIFYPTS--SPTLAFNQN---STFGFCNSLKRLAKSLTSTRKCRGGYRIRCGQVQNNDKD 76
RIF TS +P +F + S GF N++ L S R+ G + D
Sbjct: 31 RIFNLTSLQNPNHSFFKTLHKSQTGFSNTV------LASMRREEG-----------VEVD 73
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYMR+CVELA +A+G TSPNPMVGCVIVKDG IVG+GFHPKAGQPHAEVFALRDAGEL
Sbjct: 74 DSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFALRDAGEL 133
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AE ATAYVSLEPCNHYGRTPPCTEALIKAKVK+VVVGM+DPNPIV+S G+ RL+DAGIDV
Sbjct: 134 AENATAYVSLEPCNHYGRTPPCTEALIKAKVKRVVVGMVDPNPIVSSSGISRLKDAGIDV 193
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
TVGVE+ELCK++NE FIHR++T KPF LRY++SVNG LD++GEG ++SGGYYS+LLQE
Sbjct: 194 TVGVEEELCKKMNEGFIHRMLTEKPFLALRYSMSVNGCFLDKIGEGASDSGGYYSKLLQE 253
Query: 257 YDAIILSASSTKKYSIPASQEPD--ANQPFRIITVSN-HASPIRIPGLS-EESSSKVIVF 312
YDAIILS+S + + S +SQE + QP +II N SPI + EES KV++F
Sbjct: 254 YDAIILSSSLSDELSSISSQEATNVSIQPIQIIVARNAQQSPILASSNTVEESGPKVVLF 313
Query: 313 TDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGI 372
T E+ E + + G+ETV L ++NL ++LDYCY+ G CSVL+DLRGN DLE+LL++G
Sbjct: 314 TAKELLAESGISSSGVETVVLEKINLDSILDYCYNRGLCSVLLDLRGNVKDLEVLLRDGF 373
Query: 373 EQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
EQ LLQK+++EVLP W+ D ++ K+ +K+LQ K +++LEGYL
Sbjct: 374 EQKLLQKVIIEVLPEWSTKDERQIASMKWLESKQ--VKDLQSKQLGGNVLLEGYL 426
>gi|357478665|ref|XP_003609618.1| Riboflavin biosynthesis protein RibD [Medicago truncatula]
gi|355510673|gb|AES91815.1| Riboflavin biosynthesis protein RibD [Medicago truncatula]
Length = 431
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/369 (60%), Positives = 281/369 (76%), Gaps = 4/369 (1%)
Query: 63 YRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQ 122
Y +R + D DDGFYMR+ VELA K +G TSPNP+VGCVIVK G IVG+GFHPK GQ
Sbjct: 60 YVVRAQNNHHQDNDDGFYMRKSVELARKGLGYTSPNPLVGCVIVKHGNIVGQGFHPKPGQ 119
Query: 123 PHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVN 182
PHAEVFALRDAG+L+E ATAYVSLEPCNH+GRTPPCTEALIKAK+KKVV+GM+DPNPIV
Sbjct: 120 PHAEVFALRDAGDLSENATAYVSLEPCNHFGRTPPCTEALIKAKIKKVVIGMVDPNPIVA 179
Query: 183 SKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG 242
SKG++RLRDAGI+V VGVE+ELCK LNEA+IH ++TGKP TLRY+LSVNG++LD LG G
Sbjct: 180 SKGVDRLRDAGIEVVVGVEEELCKSLNEAYIHHMLTGKPLLTLRYSLSVNGNLLDSLGNG 239
Query: 243 VAESGGYYSQLLQEYDAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRI 298
V +SGGYYS+LLQEYDA+ILS+S ++ +P S+EP ANQP RII + S I
Sbjct: 240 VTDSGGYYSRLLQEYDAVILSSSLFRENLSANPVPTSKEPGANQPIRIIMHKDSGSSNPI 299
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
P + E + K I+FT+ P+ +GIE V++ Q+NL +LDYC G CSVL+D+R
Sbjct: 300 PLVINEVTDKAIIFTNCRTATTPEEAQQGIEIVSMDQINLDVILDYCNRQGLCSVLLDVR 359
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSS 418
GN+ + E L+KEGI++ + K V EVLPVWNG +P L +L + + ++NL+P S+
Sbjct: 360 GNFSEYEDLVKEGIKKKYINKFVTEVLPVWNGCTKNDPLLPLKNLDQGVKVENLRPMASA 419
Query: 419 QSIVLEGYL 427
QS+V+EGYL
Sbjct: 420 QSVVIEGYL 428
>gi|18415600|ref|NP_567618.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Arabidopsis thaliana]
gi|26452452|dbj|BAC43311.1| unknown protein [Arabidopsis thaliana]
gi|29824151|gb|AAP04036.1| unknown protein [Arabidopsis thaliana]
gi|332658979|gb|AEE84379.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Arabidopsis thaliana]
Length = 426
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/433 (56%), Positives = 305/433 (70%), Gaps = 28/433 (6%)
Query: 3 THRLSTPNHNLHQLGLSPCRIFYPTS--SPTLAFNQNSTFGFCNSLKRLAKSLTS-TRKC 59
T R S P L L +P RIF TS SP F KRL KS T +
Sbjct: 14 TPRTSIPL--LPSLSSNPRRIFNLTSLQSPNHCF-----------FKRLHKSQTGFSNPV 60
Query: 60 RGGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPK 119
R + ++ + DD FYMR+CVELA +A+G TSPNPMVGCVIVKDG IVG+GFHPK
Sbjct: 61 LAAMR----REEDVEVDDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPK 116
Query: 120 AGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNP 179
AGQPHAEVFALRDAGELAE ATAYVSLEPCNHYGRTPPCTEALIKAKV++VV+GM+DPNP
Sbjct: 117 AGQPHAEVFALRDAGELAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNP 176
Query: 180 IVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQL 239
IV S G+ RL+DAGIDVTV VE+ELCK++NE FIHR++TGKPF LRY++SVNG +LD++
Sbjct: 177 IVFSSGISRLKDAGIDVTVSVEEELCKKMNEGFIHRMLTGKPFLALRYSMSVNGCLLDKI 236
Query: 240 GEGVAESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPD--ANQPFRIITVSNHASPIR 297
G+G ++SGGYYS+LLQEYDAIILS+S + + S +SQE + QP +II SN A
Sbjct: 237 GQGASDSGGYYSKLLQEYDAIILSSSLSDELSSISSQEAINVSIQPIQIIVASN-AQQSH 295
Query: 298 IPGLS---EESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVL 354
I S EES KV+VFT E E + + G+ETV L ++NL ++LDYCY+ G CSVL
Sbjct: 296 ILASSHTVEESGPKVVVFTAKESVAESGISSSGVETVVLEKINLDSILDYCYNRGLCSVL 355
Query: 355 VDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQP 414
+DLRGN DLE+LL++G EQ LLQK+++EVLP W+ D ++ K +K+LQ
Sbjct: 356 LDLRGNVKDLEVLLRDGFEQKLLQKVIIEVLPEWSTKDERQIASMKWLESKH--VKDLQS 413
Query: 415 KMSSQSIVLEGYL 427
K S++LEGY
Sbjct: 414 KQLGGSVLLEGYF 426
>gi|21618159|gb|AAM67209.1| probable riboflavin biosynthesis related protein [Arabidopsis
thaliana]
Length = 426
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/432 (56%), Positives = 303/432 (70%), Gaps = 26/432 (6%)
Query: 3 THRLSTPNHNLHQLGLSPCRIFYPTS--SPTLAFNQNSTFGFCNSLKRLAKSLTSTRKCR 60
T R S P L L +P RIF TS SP F KRL KS T
Sbjct: 14 TPRTSIPL--LPSLSSNPRRIFNLTSLQSPNHCF-----------FKRLHKSQTGFSNPV 60
Query: 61 GGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKA 120
R ++ + DD FYMR+CVELA +A+G TSPNPMVGCVIVKDG IVG+GFHPKA
Sbjct: 61 LAAMKR---EEDVEVDDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKA 117
Query: 121 GQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPI 180
GQPHAEVFALRDAGELAE ATAYVSLEPCNHYGRTPPCTEALIKAKV++VV+GM+DPNPI
Sbjct: 118 GQPHAEVFALRDAGELAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPI 177
Query: 181 VNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLG 240
V S G+ RL+DAGIDVTV VE+ELCK++NE FIHR++TGKPF LRY++SVNG +LD++G
Sbjct: 178 VFSSGISRLKDAGIDVTVSVEEELCKKMNEGFIHRMLTGKPFLALRYSMSVNGCLLDKIG 237
Query: 241 EGVAESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPD--ANQPFRIITVSNHASPIRI 298
+G ++SGGYYS+LLQEYDAIILS+S + + S +SQE + QP +II SN A I
Sbjct: 238 QGASDSGGYYSKLLQEYDAIILSSSLSDELSSISSQEAINVSIQPIQIIVASN-AQQSHI 296
Query: 299 PGLS---EESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLV 355
S EES KV+VFT E E + + G+ETV L ++NL ++LDYCY+ G CSVL+
Sbjct: 297 LASSHTVEESGPKVVVFTAKESVAESGISSSGVETVVLEKINLDSILDYCYNRGLCSVLL 356
Query: 356 DLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPK 415
DLRGN DLE+LL++G EQ LLQK+++EVLP W+ D ++ K +K+LQ K
Sbjct: 357 DLRGNVKDLEVLLRDGFEQKLLQKVIIEVLPEWSTKDERQIASMKWLESKH--VKDLQSK 414
Query: 416 MSSQSIVLEGYL 427
S++LEGY
Sbjct: 415 QLGGSVLLEGYF 426
>gi|5262786|emb|CAB45891.1| putative protein [Arabidopsis thaliana]
gi|7268893|emb|CAB79096.1| putative protein [Arabidopsis thaliana]
gi|45268463|gb|AAS55854.1| pyrimidine deaminase [synthetic construct]
Length = 363
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/362 (61%), Positives = 280/362 (77%), Gaps = 8/362 (2%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
++ + DD FYMR+CVELA +A+G TSPNPMVGCVIVKDG IVG+GFHPKAGQPHAEVFAL
Sbjct: 5 EDVEVDDSFYMRKCVELAKRAIGCTSPNPMVGCVIVKDGDIVGQGFHPKAGQPHAEVFAL 64
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
RDAGELAE ATAYVSLEPCNHYGRTPPCTEALIKAKV++VV+GM+DPNPIV S G+ RL+
Sbjct: 65 RDAGELAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGISRLK 124
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
DAGIDVTV VE+ELCK++NE FIHR++TGKPF LRY++SVNG +LD++G+G ++SGGYY
Sbjct: 125 DAGIDVTVSVEEELCKKMNEGFIHRMLTGKPFLALRYSMSVNGCLLDKIGQGASDSGGYY 184
Query: 251 SQLLQEYDAIILSASSTKKYSIPASQEPD--ANQPFRIITVSNHASPIRIPGLS---EES 305
S+LLQEYDAIILS+S + + S +SQE + QP +II SN A I S EES
Sbjct: 185 SKLLQEYDAIILSSSLSDELSSISSQEAINVSIQPIQIIVASN-AQQSHILASSHTVEES 243
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
KV+VFT E E + + G+ETV L ++NL ++LDYCY+ G CSVL+DLRGN DLE
Sbjct: 244 GPKVVVFTAKESVAESGISSSGVETVVLEKINLDSILDYCYNRGLCSVLLDLRGNVKDLE 303
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
+LL++G EQ LLQK+++EVLP W+ D ++ K +K+LQ K S++LEG
Sbjct: 304 VLLRDGFEQKLLQKVIIEVLPEWSTKDERQIASMKWLESKH--VKDLQSKQLGGSVLLEG 361
Query: 426 YL 427
Y
Sbjct: 362 YF 363
>gi|195640478|gb|ACG39707.1| riboflavin biosynthesis protein ribD [Zea mays]
Length = 392
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/376 (56%), Positives = 263/376 (69%), Gaps = 6/376 (1%)
Query: 52 SLTSTRKCRGGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKI 111
S T R G RC D DD YMRRCVELA KA G TSPNPMVGCVIV+DG++
Sbjct: 23 SATRPRLAAGALSGRCQAQAAGDLDDAHYMRRCVELARKAAGHTSPNPMVGCVIVRDGRV 82
Query: 112 VGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVV 171
VGEGFHPKAGQPHAEVFALRDAG LAE ATAYVSLEPCNHYGRTPPCTEALI AKVK+VV
Sbjct: 83 VGEGFHPKAGQPHAEVFALRDAGNLAENATAYVSLEPCNHYGRTPPCTEALINAKVKEVV 142
Query: 172 VGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSV 231
VGM DPNPIV SKG+E+L+ AGI V VGVE+ LC++LNEA+IHR++TGK FATLR TLS+
Sbjct: 143 VGMTDPNPIVASKGIEKLQGAGISVRVGVEEALCRKLNEAYIHRMLTGKAFATLRATLSM 202
Query: 232 NGHVLDQLGEGVAESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSN 291
NG + +Q+G+G +SGGYYSQL++EYD +I+S+ K ++P S+E NQP II
Sbjct: 203 NGIITNQIGKGADQSGGYYSQLMKEYDGVIISSDLAKMSALPLSREAGTNQPLCIIIAQG 262
Query: 292 HASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFC 351
+S + IP LS+E +S+ IV D +TVEP G+E Q++L+++L G C
Sbjct: 263 ESSRLHIPSLSQEHASRAIVLADSPVTVEP----AGVEVAVFRQIDLESILQLLAQRGLC 318
Query: 352 SVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKN 411
SVLVD R LL + E L+QK+VVEVLP W SDG + S + LKN
Sbjct: 319 SVLVDFREAGESFASLLNDFQEDKLVQKVVVEVLPFWLASDGLSNLAFGGS--QSFPLKN 376
Query: 412 LQPKMSSQSIVLEGYL 427
L+ + + S++LEGY+
Sbjct: 377 LELRDVNGSVLLEGYV 392
>gi|212275115|ref|NP_001130669.1| uncharacterized protein LOC100191772 [Zea mays]
gi|194689788|gb|ACF78978.1| unknown [Zea mays]
gi|414864390|tpg|DAA42947.1| TPA: riboflavin biosynthesis protein ribD [Zea mays]
Length = 392
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/376 (56%), Positives = 263/376 (69%), Gaps = 6/376 (1%)
Query: 52 SLTSTRKCRGGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKI 111
S T R G RC D DD YMRRCVELA KA G TSPNPMVGCVIV+DG++
Sbjct: 23 SATRPRLVAGALGGRCQAQAAGDLDDAHYMRRCVELARKAAGHTSPNPMVGCVIVRDGRV 82
Query: 112 VGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVV 171
VGEGFHPKAGQPHAEVFALRDAG LAE ATAYVSLEPCNHYGRTPPCTEALI AKVK+VV
Sbjct: 83 VGEGFHPKAGQPHAEVFALRDAGNLAENATAYVSLEPCNHYGRTPPCTEALINAKVKEVV 142
Query: 172 VGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSV 231
VGM DPNPIV SKG+E+L+ AGI V VGVE+ LC++LNEA+IHR++TGK FATLR TLS+
Sbjct: 143 VGMTDPNPIVASKGIEKLQGAGISVRVGVEEALCRKLNEAYIHRMLTGKAFATLRATLSM 202
Query: 232 NGHVLDQLGEGVAESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSN 291
NG + +Q+G+G +SGGYYSQL++EYD +I+S+ K ++P S+E NQP II
Sbjct: 203 NGIITNQIGKGADQSGGYYSQLMKEYDGVIISSDLAKMSALPLSREAGTNQPLCIIIAQG 262
Query: 292 HASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFC 351
+S + IP LS+E +S+ IV D +TVEP G+E Q++L+++L G C
Sbjct: 263 ESSRLHIPSLSQEHASRAIVLADSPVTVEP----AGVEVAVFRQIDLESILQLLAQRGLC 318
Query: 352 SVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKN 411
SVLVD R LL + E L+QK+VVEVLP W SDG + S + LKN
Sbjct: 319 SVLVDFREAGESFASLLNDFQEDKLVQKVVVEVLPFWLASDGLSNLAFGGS--QSFPLKN 376
Query: 412 LQPKMSSQSIVLEGYL 427
L+ + + S++LEGY+
Sbjct: 377 LELRDVNGSVLLEGYV 392
>gi|242042489|ref|XP_002468639.1| hypothetical protein SORBIDRAFT_01g049430 [Sorghum bicolor]
gi|241922493|gb|EER95637.1| hypothetical protein SORBIDRAFT_01g049430 [Sorghum bicolor]
Length = 396
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/363 (57%), Positives = 260/363 (71%), Gaps = 7/363 (1%)
Query: 65 IRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPH 124
+RC Q Q D YMRRCVELA KA G TSPNPMVGCVIV+DG++VGEGFHPKAGQPH
Sbjct: 41 VRC-QAQAAGDLDAQYMRRCVELARKAAGHTSPNPMVGCVIVRDGRVVGEGFHPKAGQPH 99
Query: 125 AEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSK 184
AEVFALRDAG LAE ATAYVSLEPCNHYGRTPPCTEALI AKVK+VVVGM DPNPIV SK
Sbjct: 100 AEVFALRDAGNLAENATAYVSLEPCNHYGRTPPCTEALINAKVKEVVVGMTDPNPIVASK 159
Query: 185 GLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA 244
G+E+L+ AGI+V VGVE+ LC++LNEA+IHR++TGK FATLR TLS+NG V +Q+G+G
Sbjct: 160 GIEKLQGAGINVRVGVEEALCRKLNEAYIHRMLTGKAFATLRATLSMNGIVTNQIGKGAD 219
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEE 304
+SGGYYSQL++EYD +I+S+ K S+P S+E ANQP II S + IP LSEE
Sbjct: 220 QSGGYYSQLMKEYDGVIISSDLAKMSSLPLSREAGANQPLYIIIAQGENSRLHIPSLSEE 279
Query: 305 SSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+SKVIV D +T P G+E L Q++L+++L G CSVLVD R
Sbjct: 280 HASKVIVLADSPVTAAP----AGVEVAVLRQIDLESILQLLAQRGLCSVLVDFREATESF 335
Query: 365 EMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLE 424
LL + E L+QK+VVE+LP W S+G + S + LKNL+ + + +++E
Sbjct: 336 ASLLNDFQEDKLVQKVVVEILPFWFASEGLSNLAFGGS--QSFPLKNLEHREVNGGVLME 393
Query: 425 GYL 427
GY+
Sbjct: 394 GYV 396
>gi|326520824|dbj|BAJ92775.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 468
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/362 (59%), Positives = 259/362 (71%), Gaps = 8/362 (2%)
Query: 66 RCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHA 125
RC Q Q D D YMRRCVELA A G TSPNPMVGCVIV++GK+VGEGFHPKAGQPHA
Sbjct: 115 RC-QAQAGDMD-AHYMRRCVELARTAAGHTSPNPMVGCVIVREGKVVGEGFHPKAGQPHA 172
Query: 126 EVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKG 185
EVFALRDAG+LAE ATAYVSLEPCNHYGRTPPC+EALIKAKVK+VVVGM DPNPIV SKG
Sbjct: 173 EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCSEALIKAKVKEVVVGMTDPNPIVASKG 232
Query: 186 LERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE 245
+E+LR+AGIDV VGVE+ LC RLNEA+IHR++TGK FATLR TLS+NG V++Q+G G +
Sbjct: 233 IEKLRNAGIDVRVGVEEALCLRLNEAYIHRMLTGKAFATLRATLSMNGIVINQIGSGTDQ 292
Query: 246 SGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
GGYYSQL +EYD +I+S+ K ++P S+E A QP II S + IP L EES
Sbjct: 293 PGGYYSQLAKEYDGVIISSDMAKATALPMSREAGAKQPLYIIIAQGQGSKLDIPFLDEES 352
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+S IV D +TVEP G+ L Q+NL+++L G CSVLVD R G L
Sbjct: 353 ASNAIVLADSPVTVEP----AGVSVSVLDQMNLESILQLLADRGLCSVLVDFRDAGGVLA 408
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
LL + E L+QK+V+E+ PVW S G P L + LKN++ K + +++LEG
Sbjct: 409 SLLSKFQEDKLVQKVVLELSPVWMVSPG--PSDLAFGGSQSFALKNVEHKEVNGTLLLEG 466
Query: 426 YL 427
YL
Sbjct: 467 YL 468
>gi|242347654|gb|ACS92631.1| conserved hypothetical protein [Triticum aestivum]
Length = 396
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/362 (58%), Positives = 258/362 (71%), Gaps = 8/362 (2%)
Query: 66 RCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHA 125
RC Q Q D D YMRRCV+LA A G TSPNPMVGCVIV++G++VGEGFHPKAGQPHA
Sbjct: 43 RC-QAQAGDMD-AHYMRRCVDLARTAAGHTSPNPMVGCVIVREGEVVGEGFHPKAGQPHA 100
Query: 126 EVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKG 185
EVFALRDAG+LAE ATAYVSLEPCNHYGRTPPCTEALIKAK+K+VVVGM DPNPIV SKG
Sbjct: 101 EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIKAKIKEVVVGMTDPNPIVASKG 160
Query: 186 LERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE 245
+E+LR+AGIDV VGVE+ LC RLNEA+IHR++TGK FATLR TLS+NG V++Q+G G +
Sbjct: 161 IEKLRNAGIDVRVGVEEALCLRLNEAYIHRMLTGKAFATLRTTLSMNGIVINQIGSGADQ 220
Query: 246 SGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
GGYYSQL +EYD +++S+ K ++P SQE A QP II S + IP L EES
Sbjct: 221 PGGYYSQLAKEYDGVVISSDMAKATTLPISQEAGAKQPLYIIIAQGEGSKLHIPFLDEES 280
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+S IV D + VEP G+ L ++NL ++L G CSVLVD R G L
Sbjct: 281 ASNAIVLADSPVAVEP----SGVSVSVLDEMNLDSILRILADRGLCSVLVDFRDAGGALA 336
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
LLK+ E L+QK++VE+ PVW S G P L + LKN++ K + +++LEG
Sbjct: 337 SLLKDFQEDKLVQKVLVELSPVWMVSPG--PSDLAFGGSQSFALKNVEHKEVNGTLLLEG 394
Query: 426 YL 427
YL
Sbjct: 395 YL 396
>gi|357120945|ref|XP_003562184.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Brachypodium
distachyon]
Length = 401
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/369 (57%), Positives = 262/369 (71%), Gaps = 9/369 (2%)
Query: 60 RGGYRIRCGQVQNNDKD-DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHP 118
RGG R+RC Q Q +D DG Y+RRCVELA A G TSPNPMVGCVIV+DG++VGEGFHP
Sbjct: 40 RGG-RLRC-QAQGGARDVDGHYIRRCVELARTAAGHTSPNPMVGCVIVRDGRVVGEGFHP 97
Query: 119 KAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPN 178
KAGQPHAEVFALR AG+ AE ATAYVSLEPCNHYGRTPPC+EALIKAKVK+VVVGM DPN
Sbjct: 98 KAGQPHAEVFALRAAGDFAENATAYVSLEPCNHYGRTPPCSEALIKAKVKEVVVGMTDPN 157
Query: 179 PIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQ 238
PIV SKG+E+LR AGIDV +GVE+ LC RLNEA+IHR++TG+ FATLR TLS+NG V+DQ
Sbjct: 158 PIVASKGIEKLRGAGIDVRIGVEEALCLRLNEAYIHRMLTGRAFATLRTTLSMNGIVMDQ 217
Query: 239 LGEGVAESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRI 298
+G G + GGYYSQLL+EYD I++S++ K ++P S+E A QP II S + I
Sbjct: 218 IGSGADQPGGYYSQLLKEYDGIVISSNMAKTTALPISREAGAKQPLYIIIAQGEDSKLHI 277
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
P L E+S S IV D +TV+P G+ L Q++L ++L G CSVLVD R
Sbjct: 278 PFLHEDSVSNAIVLADSPVTVQP----AGVSISVLDQMSLDSILQLLSERGLCSVLVDFR 333
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSS 418
G L LL E L+QK+++E+ PVW S G P L + LKN++ K +
Sbjct: 334 DAGGSLASLLNNFQEDKLVQKVILELSPVWMPSPG--PSNLAFGGSQSFPLKNVEHKEVN 391
Query: 419 QSIVLEGYL 427
+++LEGY+
Sbjct: 392 GTLLLEGYV 400
>gi|222624084|gb|EEE58216.1| hypothetical protein OsJ_09181 [Oryza sativa Japonica Group]
Length = 396
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 262/364 (71%), Gaps = 9/364 (2%)
Query: 65 IRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPH 124
+RC Q Q +D D G YMRRCVELA KA G TSPNPMVGCV+V+DG++VGEGFHPKAGQPH
Sbjct: 41 VRC-QAQASDMD-GHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFHPKAGQPH 98
Query: 125 AEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSK 184
AEVFALRDAG+LAE ATAYVSLEPCNHYGRTPPCTEALI AKVK VVVGM DPNPIV SK
Sbjct: 99 AEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASK 158
Query: 185 GLERLRDAGIDVTVGVEDEL-CKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV 243
G+ERLR AGIDV + V++E C++LNEA+IHR++TGK FATLR TLS+NG V++Q+G G
Sbjct: 159 GIERLRSAGIDVRLCVDEEASCRKLNEAYIHRMLTGKAFATLRTTLSMNGVVINQIGSGA 218
Query: 244 AESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
+ GYYSQLL+EYD +I+S++ K ++P S+E A QP II S + IP L E
Sbjct: 219 DQPEGYYSQLLKEYDGVIISSNFAKTNTLPVSREAGAKQPLYIIIAQCENSQLNIPFLKE 278
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
E +++ +V +D ITVEP G++ + L Q+NL A+L G CSVLVD R G
Sbjct: 279 ERAAEAVVLSDSPITVEP----AGVDVLVLDQMNLDAILQLLAQRGLCSVLVDFREAGGG 334
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVL 423
+ LL + L+QK+VVE+LPVW S G P L + LK+++ + S++L
Sbjct: 335 IASLLNNFQDDKLVQKVVVELLPVWAVSKG--PSDLAFGGSQSFPLKDVEHSEVNGSVLL 392
Query: 424 EGYL 427
+GY+
Sbjct: 393 QGYV 396
>gi|115450331|ref|NP_001048766.1| Os03g0117200 [Oryza sativa Japonica Group]
gi|108705865|gb|ABF93660.1| riboflavin biosynthesis protein RibD containing protein, expressed
[Oryza sativa Japonica Group]
gi|113547237|dbj|BAF10680.1| Os03g0117200 [Oryza sativa Japonica Group]
gi|215687333|dbj|BAG91867.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 423
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 262/364 (71%), Gaps = 9/364 (2%)
Query: 65 IRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPH 124
+RC Q Q +D D G YMRRCVELA KA G TSPNPMVGCV+V+DG++VGEGFHPKAGQPH
Sbjct: 68 VRC-QAQASDMD-GHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFHPKAGQPH 125
Query: 125 AEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSK 184
AEVFALRDAG+LAE ATAYVSLEPCNHYGRTPPCTEALI AKVK VVVGM DPNPIV SK
Sbjct: 126 AEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASK 185
Query: 185 GLERLRDAGIDVTVGVEDEL-CKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV 243
G+ERLR AGIDV + V++E C++LNEA+IHR++TGK FATLR TLS+NG V++Q+G G
Sbjct: 186 GIERLRSAGIDVRLCVDEEASCRKLNEAYIHRMLTGKAFATLRTTLSMNGVVINQIGSGA 245
Query: 244 AESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
+ GYYSQLL+EYD +I+S++ K ++P S+E A QP II S + IP L E
Sbjct: 246 DQPEGYYSQLLKEYDGVIISSNFAKTNTLPVSREAGAKQPLYIIIAQCENSQLNIPFLKE 305
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
E +++ +V +D ITVEP G++ + L Q+NL A+L G CSVLVD R G
Sbjct: 306 ERAAEAVVLSDSPITVEP----AGVDVLVLDQMNLDAILQLLAQRGLCSVLVDFREAGGG 361
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVL 423
+ LL + L+QK+VVE+LPVW S G P L + LK+++ + S++L
Sbjct: 362 IASLLNNFQDDKLVQKVVVELLPVWAVSKG--PSDLAFGGSQSFPLKDVEHSEVNGSVLL 419
Query: 424 EGYL 427
+GY+
Sbjct: 420 QGYV 423
>gi|218191968|gb|EEC74395.1| hypothetical protein OsI_09744 [Oryza sativa Indica Group]
Length = 396
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/364 (56%), Positives = 261/364 (71%), Gaps = 9/364 (2%)
Query: 65 IRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPH 124
+RC Q Q +D D G YMRRCVELA KA G TSPNPMVGCV+V+DG++VGEGFHPKAGQPH
Sbjct: 41 VRC-QAQASDMD-GHYMRRCVELARKAAGHTSPNPMVGCVVVRDGRVVGEGFHPKAGQPH 98
Query: 125 AEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSK 184
AEVFALRDAG+LAE ATAYVSLEPCNHYGRTPPCTEALI AKVK VVVGM DPNPIV SK
Sbjct: 99 AEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVGMTDPNPIVASK 158
Query: 185 GLERLRDAGIDVTVGVEDEL-CKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV 243
G+ERLR AGIDV + V++E C++LNEA+IHR++TGK FATLR TLS+NG V++Q+G G
Sbjct: 159 GIERLRSAGIDVRLCVDEEASCRKLNEAYIHRMLTGKAFATLRTTLSMNGVVINQIGSGA 218
Query: 244 AESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
+ GYYSQLL+EYD +I+S++ K ++P S+E A QP II S + IP L E
Sbjct: 219 DQPEGYYSQLLKEYDGVIISSNFAKTNTLPVSREAGAKQPLYIIIAQGENSQLNIPFLKE 278
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
E +++ +V +D ITVEP G++ + L Q+NL A+L G CSVLVD R G
Sbjct: 279 ERAAEAVVLSDSPITVEP----AGVDVLVLDQMNLDAILQLLAQRGLCSVLVDFREAGGG 334
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVL 423
+ LL + L+QK+VVE+LPVW S G P L + LK+++ + ++L
Sbjct: 335 IASLLNNFQDDKLVQKVVVELLPVWAVSKG--PSDLAFGGSQSFPLKDVEHSEVNGCVLL 392
Query: 424 EGYL 427
+GY+
Sbjct: 393 QGYV 396
>gi|215693340|dbj|BAG88722.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 404
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 238/330 (72%), Gaps = 9/330 (2%)
Query: 61 GGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKA 120
G R+ C + DDG Y+R CVELA KA G TSPNPMVGCV+V+ G++VGEGFHP+A
Sbjct: 74 GAPRLACADMD----DDGVYIRWCVELARKAAGHTSPNPMVGCVVVRGGRVVGEGFHPEA 129
Query: 121 GQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPI 180
GQPHAEVFALRDA +LAE ATAYVSLEPCNHYGRTPPCTEALI AK+K VVVGM DPNPI
Sbjct: 130 GQPHAEVFALRDARDLAENATAYVSLEPCNHYGRTPPCTEALINAKLKDVVVGMTDPNPI 189
Query: 181 VNSKGLERLRDAGIDVTVGVEDE-LCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQL 239
V SKG+ERL+ AGIDV V +E+E LC+ LNEA+IH ++TGK FATLR TLSVNG V++Q+
Sbjct: 190 VASKGIERLQSAGIDVRVCMEEEALCRNLNEAYIHCMLTGKAFATLRTTLSVNGVVVNQI 249
Query: 240 GEGVAESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIP 299
G G + GGYYSQLL+EYD +I+S S ++P S E A QP II S + I
Sbjct: 250 GTGADQPGGYYSQLLKEYDGVIISGISVNMTTLPTSHEAGAKQPLYIIIAQGGNSQLNIQ 309
Query: 300 GLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
L EE +S+ +V TD +TV+P G+E + L +++L+ +L+ G CSVLVD R
Sbjct: 310 FLREECASEAVVLTDSPVTVKP----PGVEVLVLDRMSLEFILEILAQRGLCSVLVDFRE 365
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLPVWN 389
GD LLK E+ L+QK+VVE+LP+W
Sbjct: 366 AGGDFAYLLKNFQEEKLVQKVVVELLPIWT 395
>gi|148909999|gb|ABR18084.1| unknown [Picea sitchensis]
Length = 457
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 182/367 (49%), Positives = 247/367 (67%), Gaps = 19/367 (5%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YMR C+ LA KA+G TSPNPMVGCVIVKDG IVG+GFHPKAG+PHAEVFALR+AG
Sbjct: 90 EDAQYMRMCISLAKKALGCTSPNPMVGCVIVKDGHIVGQGFHPKAGEPHAEVFALREAGT 149
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
AEGATAYVSLEPCNHYGRTPPCT+ALI+A+V +VVVGM+DPNPIV SKG+ LR++GID
Sbjct: 150 KAEGATAYVSLEPCNHYGRTPPCTQALIQARVGRVVVGMVDPNPIVASKGVATLRNSGID 209
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
VTVGVE++LC+ +NEA+IHRI+TGKPF T+R+++S++G +LD LG+G AE GGYYS++LQ
Sbjct: 210 VTVGVEEKLCQTMNEAYIHRILTGKPFITMRFSMSLDGGMLDDLGDGAAEEGGYYSKMLQ 269
Query: 256 EYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDG 315
+YD +I+S + S E A QP RI+ PI + + + +++ +
Sbjct: 270 QYDGVIVSDQTLYDNLNLLSSEAGAKQPLRIVVTRTLVLPIDSLIFNTDLAPTLVLADEK 329
Query: 316 EI-------------TVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG--N 360
I T++ + +G+E V L +L + +VLD C G CSV +D RG +
Sbjct: 330 AIVDNLQSAGKLNGQTMDMLLRQRGVEVVILKKLEIDSVLDICSQRGLCSVFIDSRGLAS 389
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQS 420
G + K+ +E+ +QK+V+ + P+ + GN T LN L L+ K+S
Sbjct: 390 AGLENFIGKQALEEEAVQKLVIAICPMIS----GNKRTELNFDIPPAKLNRLRTKLSKDV 445
Query: 421 IVLEGYL 427
V+EGY
Sbjct: 446 AVVEGYF 452
>gi|168025673|ref|XP_001765358.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683411|gb|EDQ69821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/372 (46%), Positives = 247/372 (66%), Gaps = 19/372 (5%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
Q + D FYMR CV+LA +AVG TSPNP+VGCVIVKDG+IVG GFHPKAG+PHAEVFAL
Sbjct: 22 QGATEVDAFYMRMCVDLARQAVGKTSPNPIVGCVIVKDGRIVGRGFHPKAGEPHAEVFAL 81
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R+AG LA+GATAYVSLEPCNHYGRTPPC++AL+KAK+K+VVVG++DPNP V KG++ LR
Sbjct: 82 REAGPLAQGATAYVSLEPCNHYGRTPPCSQALVKAKLKRVVVGVVDPNPQVGGKGIKTLR 141
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
+AGI+V VGVE+ LC + NE+F+HR+ TG+PF TLRY++S++G L +G A+ GG Y
Sbjct: 142 NAGIEVVVGVEETLCLKANESFMHRMATGRPFVTLRYSMSMDGGFLGNMGLSNAQ-GGLY 200
Query: 251 SQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
S+LLQE DA++++ ++ S EP A QP R+I + P+ + + S +K +
Sbjct: 201 SKLLQENDAVVITDAAVLDDPDLLSSEPGAKQPLRVILARSLDLPVE-SKVFDTSYAKTL 259
Query: 311 VFTDGEI-------------TVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDL 357
V D + ++E + G++ V ++ L L+ VL CY G SVL+D
Sbjct: 260 VLADQKSCIDDIQRKSADGKSIEARLRAGGVDVVMMNDLTLENVLSVCYQLGATSVLLDS 319
Query: 358 RG--NYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPK 415
RG + G L ++ +++ QK+VV+V P++ G + P ++S + L+ +
Sbjct: 320 RGPVSSGLENFLGQQALDEEAAQKVVVQVAPIFLGENRTEPCFRMDS--DLVKLERVSSH 377
Query: 416 MSSQSIVLEGYL 427
M Q +V+EGY
Sbjct: 378 MVGQDVVIEGYF 389
>gi|222628465|gb|EEE60597.1| hypothetical protein OsJ_13992 [Oryza sativa Japonica Group]
Length = 739
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/277 (60%), Positives = 207/277 (74%), Gaps = 5/277 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DDG Y+R CVELA KA G TSPNPMVGCV+V+ G++VGEGFHP+AGQPHAEVFALRDA +
Sbjct: 3 DDGVYIRWCVELARKAAGHTSPNPMVGCVVVRGGRVVGEGFHPEAGQPHAEVFALRDARD 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LAE ATAYVSLEPCNHYGRTPPCTEALI AK+K VVVGM DPNPIV SKG+ERL+ AGID
Sbjct: 63 LAENATAYVSLEPCNHYGRTPPCTEALINAKLKDVVVGMTDPNPIVASKGIERLQSAGID 122
Query: 196 VTVGVEDE-LCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
V V +E+E LC+ LNEA+IH ++TGK FATLR TLSVNG V++Q+G G + GGYYSQLL
Sbjct: 123 VRVCMEEEALCRNLNEAYIHCMLTGKAFATLRTTLSVNGVVVNQIGTGADQPGGYYSQLL 182
Query: 255 QEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
+EYD +I+S S ++P S E A QP II S + I L EE +S+ +V TD
Sbjct: 183 KEYDGVIISGISVNMTTLPTSHEAGAKQPLYIIIAQGGNSQLNIQFLREECASEAVVLTD 242
Query: 315 GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFC 351
+TV+P G+E + L +++L+ +L+ G C
Sbjct: 243 SPVTVKP----PGVEVLVLDRMSLEFILEILAQRGLC 275
>gi|224130250|ref|XP_002320789.1| predicted protein [Populus trichocarpa]
gi|222861562|gb|EEE99104.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/192 (70%), Positives = 163/192 (84%), Gaps = 14/192 (7%)
Query: 65 IRCGQVQNN--DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQ 122
I CG + + DKDDGFYMRRCVELA KA+G TSP+PMVGCVIVK AGQ
Sbjct: 17 ISCGAKEGDSGDKDDGFYMRRCVELARKAIGCTSPSPMVGCVIVK------------AGQ 64
Query: 123 PHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVN 182
PHAEVFALRDAG++AE ATAYVSLEPCNHYGRTPPC+E ++KAK+K+VV+GM+DPNPIV
Sbjct: 65 PHAEVFALRDAGDVAENATAYVSLEPCNHYGRTPPCSEVMVKAKLKEVVIGMIDPNPIVA 124
Query: 183 SKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG 242
++G++RLRDAGIDV VGVE+ELCKRL EAFIH+++TGKPF TLRY+LS+NGH L+QLGEG
Sbjct: 125 TRGVQRLRDAGIDVVVGVEEELCKRLIEAFIHKMLTGKPFVTLRYSLSINGHPLNQLGEG 184
Query: 243 VAESGGYYSQLL 254
V +SGGY+SQ +
Sbjct: 185 VTDSGGYHSQQM 196
>gi|126660826|ref|ZP_01731920.1| riboflavin biosynthesis protein [Cyanothece sp. CCY0110]
gi|126617877|gb|EAZ88652.1| riboflavin biosynthesis protein [Cyanothece sp. CCY0110]
Length = 364
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 221/365 (60%), Gaps = 19/365 (5%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M+RC+ LA + +G TSPNP+VG VIVKDGKI+GEGFHPKAG+PHAEVFALR+A
Sbjct: 5 DNVDQQMMQRCLTLARQGLGYTSPNPLVGAVIVKDGKIIGEGFHPKAGEPHAEVFALREA 64
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE A G T YV+LEPCNHYGRTPPCTEALI AKV +VVVGM+DPNP+V+ KG+ RL++AG
Sbjct: 65 GEKAVGGTVYVNLEPCNHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIARLQEAG 124
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQL 253
I+VTVGVE+ C RLNEAF HRI+ +PF L+Y ++++G + G +G QL
Sbjct: 125 IEVTVGVEEAACLRLNEAFCHRILNNQPFGILKYAMTLDGKISSSTGHSAWVTGTKSRQL 184
Query: 254 LQEY----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
+ + DA+I+ ++ ++ + + Q N P R++ N P L +
Sbjct: 185 VHQIRAGCDAVIVGGNTVRRDNPHLTIHQVTGVN-PLRVVMSRNLHLP-EEANLWNVDIA 242
Query: 308 KVIVFTD--GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
IVFT+ +++ + KG+E + L L V+D Y CSVL + G G
Sbjct: 243 PTIVFTEWGNNPSLQTKLRDKGVEVIELSPLTPSQVMDILYERQLCSVLWECGGVLG--- 299
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIV 422
E I Q ++QKI+ + P + G +P L+ + L L+N+ + + I+
Sbjct: 300 ---AEAITQRVIQKIMAFIAPKIIGGFSAASPVGDLGLDKMSDALPLQNVSFRQVERDIL 356
Query: 423 LEGYL 427
+EGYL
Sbjct: 357 VEGYL 361
>gi|17227578|ref|NP_484126.1| riboflavin biosynthesis protein [Nostoc sp. PCC 7120]
gi|17135060|dbj|BAB77606.1| riboflavin biosynthesis protein [Nostoc sp. PCC 7120]
Length = 396
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 218/363 (60%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G TSPNP+VG V+VKDG+IVGEGFHP+AG+PHAEVFALR AGEL
Sbjct: 38 DVRMMQRCLELARRALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGEPHAEVFALRAAGEL 97
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EALI A V KVVVGM+DPNP+V G+ RLR AG++V
Sbjct: 98 ARGATVYVNLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVGGGGIARLRGAGVEV 157
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE C++LNE F+HRIV KP L+Y ++++G + G + G Q
Sbjct: 158 LVGVEMAACQQLNEGFVHRIVHKKPLGILKYAMTLDGKIATTSGHSAWVTNPSARGEVHQ 217
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ ++ ++ + S + + P R++ P+ L E + +V
Sbjct: 218 LRAACDAVIVGGNTVRRDNPYLTSHQEGVHNPLRVVMSRQMDLPLDA-HLWETVEAPTLV 276
Query: 312 FTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T ++ PD + KG+E V L L + V+ Y Y GFCSVL + G L
Sbjct: 277 LT--QVGANPDFQKLLQQKGVEIVELASLTPETVMSYLYDRGFCSVLWECGGT------L 328
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSIVLE 424
I Q +QKI+ + P + GS P L +++ + LIL+ ++ ++ ++E
Sbjct: 329 AASAIAQGAVQKILAFIAPKIIGGSHAPTPVGDLGFDTMTEALILERVRWRVVGSDCLVE 388
Query: 425 GYL 427
GYL
Sbjct: 389 GYL 391
>gi|428316804|ref|YP_007114686.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Oscillatoria
nigro-viridis PCC 7112]
gi|428240484|gb|AFZ06270.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Oscillatoria
nigro-viridis PCC 7112]
Length = 391
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 228/386 (59%), Gaps = 26/386 (6%)
Query: 55 STRKCRGGYRIRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGE 114
+ R+ +G ++ +VQ D+ MRRC+ELA +A+G T+PNP+VG VIV+DGKIVGE
Sbjct: 15 ANRQQQGTKQLENSEVQEFDRA---MMRRCIELARRALGKTAPNPLVGSVIVRDGKIVGE 71
Query: 115 GFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGM 174
GFHP AGQPHAEVFALR+AGELAEGAT YV+LEPCNHYGRTPPC+EAL+KAKV KVV GM
Sbjct: 72 GFHPGAGQPHAEVFALREAGELAEGATVYVNLEPCNHYGRTPPCSEALVKAKVAKVVAGM 131
Query: 175 LDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGH 234
+DPNP+V GL RLRDAGI+V GVE E C++LNEAF+HRI+ +PF L+Y ++++G
Sbjct: 132 VDPNPLVAGTGLARLRDAGIEVVAGVEGEACQKLNEAFVHRILYRRPFGILKYAMTLDGK 191
Query: 235 VLDQLGEGVAESGGYYSQLLQEY----DAIILSASSTK-KYSIPASQEPDANQPFRIITV 289
+ G +G + DA+I+ ++ + + S +PD N P R++
Sbjct: 192 IATSSGHSAWVTGEEARSEVHRVRVGCDAVIVGGNTVRLDNPLLTSHQPDRNNPLRVVMS 251
Query: 290 SNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMG----TKGIETVNLHQLNLKAVLDYC 345
P + L E S + +V T E V P+ KG+E V L L V+ Y
Sbjct: 252 RTLDLP-KSAWLWETSVAATLVLT--EPGVNPEFQEFLIAKGVEVVELSPLTPTNVMAYL 308
Query: 346 YSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL----LN 401
Y F SVL + G L + I + +QKI+ + P G G P + +
Sbjct: 309 YDRSFLSVLWECGGT------LAAQAITEGAVQKIMAFIAPKIVGGQGA-PTPVGDLGFS 361
Query: 402 SLGKRLILKNLQPKMSSQSIVLEGYL 427
++ + L L+ + + V+EGYL
Sbjct: 362 AMTEALTLERVSWRAVGADCVVEGYL 387
>gi|75907679|ref|YP_321975.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Anabaena variabilis ATCC 29413]
gi|75701404|gb|ABA21080.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Anabaena variabilis ATCC 29413]
Length = 396
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 219/363 (60%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G TSPNP+VG V+VKDG+IVGEGFHP+AG+PHAEVFALR AGEL
Sbjct: 38 DVRMMQRCLELARRALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGEPHAEVFALRAAGEL 97
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+E LI A V KVVVGM+DPNP+V G+ERLR AG++V
Sbjct: 98 ARGATVYVNLEPCNHYGRTPPCSEGLIAAGVAKVVVGMVDPNPLVGGGGIERLRGAGVEV 157
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE C++LNE F+HRI+ KP L+Y ++++G + G + G Q
Sbjct: 158 LVGVEMAACQQLNEGFVHRILHKKPLGILKYAMTLDGKIATVSGHSAWVTNPSARGEVHQ 217
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ ++ ++ + S + + P R++ P+ L E + + +V
Sbjct: 218 LRAACDAVIVGGNTVRRDNPYLTSHQEGVHNPLRVVMSRQLDLPVDA-HLWETAEAPTLV 276
Query: 312 FTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T ++ PD + KG+E V L L + V+ + Y GFCSVL + G L
Sbjct: 277 LT--QVGANPDFQKLLQQKGVEIVELASLTPEFVMSHLYDRGFCSVLWECGGT------L 328
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSIVLE 424
I Q +QKI+ + P + GS P L +++ + LIL+ ++ ++ ++E
Sbjct: 329 AASAIAQGAVQKILAFIAPKIIGGSHAPTPVGDLGFDTMTEALILERVRWRVVGSDCLVE 388
Query: 425 GYL 427
GYL
Sbjct: 389 GYL 391
>gi|354567709|ref|ZP_08986877.1| riboflavin biosynthesis protein RibD [Fischerella sp. JSC-11]
gi|353542167|gb|EHC11631.1| riboflavin biosynthesis protein RibD [Fischerella sp. JSC-11]
Length = 372
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 217/362 (59%), Gaps = 19/362 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D MRRC+ELA +A+G TSPNPMVG VIVKDG+I+GEGFHP+AG+PHAEVFAL+ AG
Sbjct: 17 DRAMMRRCLELARRALGCTSPNPMVGAVIVKDGEIIGEGFHPRAGEPHAEVFALKAAGAN 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YVSLEPCNHYGRTPPC+EALI A V KVVVGM+DPNP+V G+ +LR AGI+V
Sbjct: 77 ARGATVYVSLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVAGGGIAKLRAAGIEV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE+E C++LNE FIHRI+ +P L+Y ++++G + G E+ Q
Sbjct: 137 IVGVEEEACRKLNEGFIHRILYKRPLGILKYAMTLDGKIATTTGHSAWVTNQEARSVVHQ 196
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
+ DA+I+ +T + P S++ A+ P RI+ + P + L + +
Sbjct: 197 VRAACDAVIVG-GNTVRLDNPHLTSRQQGAHNPLRIVMSRSLNLPAQ-AHLWNTQEAPTL 254
Query: 311 VFTD-GEITVEPDMGTK-GIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V TD G V M K G+E + L L + V+ Y Y GFCSVL + G L
Sbjct: 255 VLTDVGANPVSRKMLLKQGVEVIELSPLTPEKVMAYLYDRGFCSVLWECGGT------LA 308
Query: 369 KEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
I Q +QKI+ + P + GS+ P L ++ + L L+ ++ ++ ++EG
Sbjct: 309 ANAIAQGAVQKILAFIAPKIIGGSNAPTPVGDLGLTTMTEALSLERVEVRVVGADCLIEG 368
Query: 426 YL 427
YL
Sbjct: 369 YL 370
>gi|428301364|ref|YP_007139670.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Calothrix
sp. PCC 6303]
gi|428237908|gb|AFZ03698.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Calothrix
sp. PCC 6303]
Length = 390
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 219/363 (60%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G TSPNP+VG VIVKDGKI+GEGFHP+AG+PHAEVFALRDAG+
Sbjct: 32 DRVMMQRCLELARRALGMTSPNPLVGAVIVKDGKIIGEGFHPRAGEPHAEVFALRDAGKR 91
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYVSLEPCNHYGRTPPC+EALI A V +VVVGM+DPNP+V G+ RLRDAGI+V
Sbjct: 92 SHGATAYVSLEPCNHYGRTPPCSEALINAGVARVVVGMMDPNPLVAGGGIARLRDAGIEV 151
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE+ C++LNE FIHR++ +P L+Y ++++G + G ES Q
Sbjct: 152 LVGVEEAACRKLNEGFIHRMLYQRPLGILKYAMTLDGKIATTTGNSAWVTNQESRQVVHQ 211
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+++ ++ ++ + S + + P R++ P+ L + + + +V
Sbjct: 212 LRVACDAVVVGGNTVRQDNPYLTSHQVGVHNPVRVVMSRTLDLPVN-ARLWQITEAPTLV 270
Query: 312 FTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T E PD + +G+E V L L+ A + Y Y GFC+VL + G L
Sbjct: 271 LT--ETGANPDFQAMLRNQGVEVVELPLLSPDAAMVYFYERGFCNVLWECGGT------L 322
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLE 424
I +QKI+ + P + G P + L S+ + L L+N+ ++ +++E
Sbjct: 323 AASAIASGAIQKILAFIAPKIIGGDHAPTPVGNLGLTSMNEALTLENIDTRLIGSDLLIE 382
Query: 425 GYL 427
GYL
Sbjct: 383 GYL 385
>gi|334116640|ref|ZP_08490732.1| riboflavin biosynthesis protein RibD [Microcoleus vaginatus FGP-2]
gi|333461460|gb|EGK90065.1| riboflavin biosynthesis protein RibD [Microcoleus vaginatus FGP-2]
Length = 391
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 216/362 (59%), Gaps = 19/362 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D MRRC+ELA +A+G T+PNP+VG VIV+DGKIVGEGFHP AGQPHAEVFALR+AGEL
Sbjct: 34 DRAMMRRCIELARRALGKTAPNPLVGSVIVRDGKIVGEGFHPGAGQPHAEVFALREAGEL 93
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPCNHYGRTPPC+EAL+KAKV KVV GM+DPNP+V GL RLR+AGI+V
Sbjct: 94 AEGATVYVNLEPCNHYGRTPPCSEALVKAKVAKVVAGMVDPNPLVAGTGLARLREAGIEV 153
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GVE E C++LNEAF+HRI+ +PF L+Y ++++G + G +G +
Sbjct: 154 VAGVEGEACQKLNEAFVHRILYRRPFGILKYAMTLDGKIATSTGHSAWVTGEEARSEVHR 213
Query: 257 Y----DAIILSASSTK-KYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
DA+I+ ++ + + S +PD N P R++ P + L E S + +V
Sbjct: 214 VRVGCDAVIVGGNTVRLDNPLLTSHQPDRNNPLRVVMSRTLDLP-KSAWLWETSVAATLV 272
Query: 312 FTDGEITVEPD--MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
T+ + E + KG+E V L L V+ Y Y F SVL + G L
Sbjct: 273 LTEPGVNREFQEFLIAKGVEVVELSPLTPTNVMAYLYDRSFLSVLWECGGT------LAA 326
Query: 370 EGIEQNLLQKIVVEVLPVWNGSDGGNPHTL----LNSLGKRLILKNLQPKMSSQSIVLEG 425
E I + +QKI+ + P G G P + +++ L L+ + + ++EG
Sbjct: 327 EAIAEGAVQKIMAFIAPKIVGGQGA-PTPVGDLGFSAMTDALALERVSWRAVGADCLVEG 385
Query: 426 YL 427
YL
Sbjct: 386 YL 387
>gi|427728616|ref|YP_007074853.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Nostoc sp.
PCC 7524]
gi|427364535|gb|AFY47256.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Nostoc sp.
PCC 7524]
Length = 401
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 217/361 (60%), Gaps = 17/361 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G TSPNP+VG V+VKDGKIVGEGFHP+AG+PHAEVFALR AG+L
Sbjct: 44 DRAMMQRCLELARRALGRTSPNPLVGAVVVKDGKIVGEGFHPRAGEPHAEVFALRAAGDL 103
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+E LI A V KVVVGM+DPNP+V G+ RLR AG++V
Sbjct: 104 ARGATVYVNLEPCNHYGRTPPCSEGLIAAGVAKVVVGMVDPNPLVAGGGIARLRAAGVEV 163
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE C++LNEAF+HRI+ +P L+Y ++++G + G + Q
Sbjct: 164 LVGVETPACQQLNEAFVHRILHKRPLGILKYAMTLDGKIATTSGHSAWVTNQAARSEVHQ 223
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+++ ++ ++ + S + A+ P R++ P L + S + +V
Sbjct: 224 LRAACDAVVVGGNTVRQDNPYLTSHQEGAHNPLRVVMSRRLNLPTDA-RLWQTSDAPTLV 282
Query: 312 FTD--GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
T+ + ++ + +G+E V L L +A +D Y GFCSVL + G L
Sbjct: 283 LTEVGANLDLQKFLLHQGVEVVELPALTPQAAMDCLYERGFCSVLWECGGT------LAA 336
Query: 370 EGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEGY 426
I Q +QKI+ + P + G+ P L ++ + L+L+ ++ ++ ++EGY
Sbjct: 337 SAIAQGAIQKILAFIAPKIIGGNHAPTPVGDLGLTTMTEALLLERVRWRVVGSDCLVEGY 396
Query: 427 L 427
L
Sbjct: 397 L 397
>gi|427706977|ref|YP_007049354.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Nostoc sp. PCC
7107]
gi|427359482|gb|AFY42204.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Nostoc sp.
PCC 7107]
Length = 400
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 216/363 (59%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G TSPNP+VG V+VKDG+IVGEGFHP+AG+PHAEVFALR AG
Sbjct: 45 DSRMMQRCLELARRALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGEPHAEVFALRAAGVG 104
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+E LI+A V KVVVGM+DPNP+V G+ RLR AG++V
Sbjct: 105 ARGATVYVNLEPCNHYGRTPPCSEGLIEAGVAKVVVGMVDPNPLVAGGGIARLRAAGVEV 164
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE+E C++LNEAF+HRI+ KPF L+Y ++++G + G + Q
Sbjct: 165 LVGVENEACQQLNEAFVHRILYKKPFGILKYAMTLDGKIATTAGHSAWVTNQAARSEVHQ 224
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DAII+ ++ ++ + S + A+ P R++ P L + + +V
Sbjct: 225 LRAACDAIIVGGNTVRQDNPFLTSHQVGAHNPLRVVMSRQFNLP-ENARLWDTQEAPTLV 283
Query: 312 FTDGEITVEPDMG----TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T E+ +PD+ G+E V L L + + + Y GFCSVL + GN L
Sbjct: 284 LT--EVGADPDLQKMLLKHGVEVVELPALTPEQAMIHLYERGFCSVLWECGGN------L 335
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLE 424
I Q +QK++ + P + GS P L ++ + L L+ + ++ ++E
Sbjct: 336 AASAIAQGAVQKVMAFIAPKIIGGSHAPTPVGDLGLTTMTEALPLERVLWRVVGSDCLVE 395
Query: 425 GYL 427
GYL
Sbjct: 396 GYL 398
>gi|434398155|ref|YP_007132159.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Stanieria
cyanosphaera PCC 7437]
gi|428269252|gb|AFZ35193.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Stanieria
cyanosphaera PCC 7437]
Length = 372
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 224/372 (60%), Gaps = 20/372 (5%)
Query: 69 QVQNNDKDDGF---YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHA 125
Q+ +N + F M+RC++LA++A G TSPNP+VG V+V+ G IVGEGFHP AG+PHA
Sbjct: 4 QLNDNSQSSSFDCQMMQRCLQLASRASGHTSPNPLVGSVVVQAGNIVGEGFHPGAGKPHA 63
Query: 126 EVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKG 185
EVFAL+ AGE A+GAT YV+LEPCNHYGRTPPCTEALI A+V KVVVGM+DPNP+V+ KG
Sbjct: 64 EVFALQAAGEQAKGATIYVNLEPCNHYGRTPPCTEALIAAQVAKVVVGMVDPNPLVSGKG 123
Query: 186 LERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA- 244
+ERLRD GI+V VGVE+E C++LNEAFIHRI+ +PF L+Y ++++G + G
Sbjct: 124 IERLRDRGIEVIVGVEEEACRQLNEAFIHRILHQRPFGILKYAMTLDGKIATSTGHSAWV 183
Query: 245 ---ESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPG 300
S QL DAII+ ++ ++ + + +++ P R++ N P
Sbjct: 184 TTPASRHLVHQLRSACDAIIIGGNTVRRDNPQLTTHGTSDRNPLRVVMSRNLDLPEDCQ- 242
Query: 301 LSEESSSKVIVFTD--GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
L + IVFT+ + + KG+E V+L L ++V+ + Y S+L +
Sbjct: 243 LWHIDQAATIVFTETNNNSQLRNQLEAKGVEVVSLTALTPQSVMKHLYDRELSSILWECG 302
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPK 415
G +L + I +QKI+ + P + G +P + L + L L+N++ +
Sbjct: 303 G------ILAAQAIADGAVQKIMAFIAPKIIGGQAAPSPVGNLGLIKMTDALKLENIKLQ 356
Query: 416 MSSQSIVLEGYL 427
I++EGYL
Sbjct: 357 TIDSDILIEGYL 368
>gi|440680286|ref|YP_007155081.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anabaena
cylindrica PCC 7122]
gi|428677405|gb|AFZ56171.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Anabaena
cylindrica PCC 7122]
Length = 375
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/366 (42%), Positives = 216/366 (59%), Gaps = 27/366 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC++LA +A+G TSPNP+VG VIVKDG+IVGEGFHP AG+PHAEVFALR AGE
Sbjct: 17 DSLMMQRCLQLARRALGRTSPNPLVGAVIVKDGEIVGEGFHPCAGEPHAEVFALRAAGEK 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GAT YVSLEPCNHYGRTPPC+EALI A V KVVVGM+DPNP+V G+ RLR AGI+V
Sbjct: 77 SHGATIYVSLEPCNHYGRTPPCSEALIAAGVSKVVVGMVDPNPLVAGGGIARLRAAGIEV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE+ C++LNE FI+RI+ +P L+Y ++++G + G E+ Q
Sbjct: 137 LVGVEEAACRQLNEGFIYRILHKRPLGILKYAMTLDGKIATSSGHSAWITNQEARSEVHQ 196
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASP--IRIPGLSEESSSK 308
L DA+I+ +T +Y P S + +N P R++ + P RI E + +
Sbjct: 197 LRAACDAVIV-GGNTVRYDNPYLTSHQQGSNNPLRVVMSRSLNLPENARI---WEVAEAP 252
Query: 309 VIVFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+V T E+ PD + KG+E + L + V+ Y Y GFCSVL + G
Sbjct: 253 TVVLT--EVGSSPDFHKLLLEKGVEVLEFPSLTPEKVMTYLYERGFCSVLWECGGT---- 306
Query: 365 EMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSI 421
L I Q +QKI+ + P + GS P L ++ + L L+ + ++
Sbjct: 307 --LAASAIAQGAVQKILAFIAPKIIGGSHAPTPVGDLGFTTMTEALSLERVHWRVVGSDC 364
Query: 422 VLEGYL 427
++EGYL
Sbjct: 365 LVEGYL 370
>gi|434406743|ref|YP_007149628.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cylindrospermum stagnale PCC 7417]
gi|428260998|gb|AFZ26948.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cylindrospermum stagnale PCC 7417]
Length = 402
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 222/372 (59%), Gaps = 23/372 (6%)
Query: 69 QVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVF 128
+V+ +D M+RC+ELA +A+G TSPNP+VG VIVKDG+IVGEGFHP+AG+PHAEVF
Sbjct: 36 KVRVGSDNDRQMMQRCLELARRALGRTSPNPLVGAVIVKDGEIVGEGFHPRAGEPHAEVF 95
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
ALR AG A GAT YVSLEPCNHYGRTPPC+EALI A V KVVVGM+DPNP+V G++R
Sbjct: 96 ALRAAGNRAHGATIYVSLEPCNHYGRTPPCSEALIDAGVAKVVVGMVDPNPLVAGGGIDR 155
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----A 244
LR AGI+V VGVE+ C +LNEAF+HRI+ +P L+Y ++++G + G
Sbjct: 156 LRRAGIEVLVGVEEAACHQLNEAFVHRILYKRPMGILKYAMTLDGKIATSFGHSAWVTSQ 215
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLS 302
E+ QL DA+I+ ++ ++ + P S +P + P R++ +S + L
Sbjct: 216 EARSEVHQLRLSCDAVIVGGNTVRQDN-PHLTSHQPGGHNPLRVV-MSRRLNLPENARLW 273
Query: 303 EESSSKVIVFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
+ + + +V T E+ P+ + G+E V L L + Y Y GFCSVL +
Sbjct: 274 QTAEAPTLVLT--EVGANPNFQDLLRKLGVEVVELPLLTPDQAMTYLYKRGFCSVLWECG 331
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPK 415
G L I Q +QK++ + P + GS+ P L ++ + L L+ ++ +
Sbjct: 332 GT------LAASAIAQGAVQKVLAFIAPKIIGGSNAPTPVGDLGFTTMTEALSLERVRWR 385
Query: 416 MSSQSIVLEGYL 427
+ ++EGYL
Sbjct: 386 VIGVDCLVEGYL 397
>gi|354556547|ref|ZP_08975840.1| riboflavin biosynthesis protein RibD [Cyanothece sp. ATCC 51472]
gi|353551452|gb|EHC20855.1| riboflavin biosynthesis protein RibD [Cyanothece sp. ATCC 51472]
Length = 363
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 218/364 (59%), Gaps = 17/364 (4%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M+RC+ LA + +G TSPNP+VG VIVK+GKI+GEGFH KAG+PHAEVFALR+A
Sbjct: 4 DNVDQQMMQRCLTLARRGLGYTSPNPLVGAVIVKEGKIIGEGFHLKAGEPHAEVFALREA 63
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE A G T YV+LEPCNHYGRTPPCTEALI AKV +VVVGM+DPNP+V+ KG+ RL++AG
Sbjct: 64 GEKAVGGTVYVNLEPCNHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIARLQEAG 123
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQL 253
I+VTVGVE+ C RLNEAF HRI+ +PF L+Y ++++G + G +G QL
Sbjct: 124 IEVTVGVEEAACLRLNEAFCHRILHNQPFGILKYAMTLDGKISSSTGHSAWVTGTKSRQL 183
Query: 254 LQEY----DAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
+ E DA+I+ ++ ++ + + + P R++ N P + L +
Sbjct: 184 VHEMRAGCDAVIVGGNTVRRDNPHLTIHQATGRNPLRVVMSRNLHLP-QDANLWNVEIAP 242
Query: 309 VIVFTDG--EITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
IVFT+ +++ + KG+E + L L V+D S+L + G +
Sbjct: 243 TIVFTEWGKNPSLQTQLRRKGVEVIELSPLIPSQVMDVLCERQLSSILWECGG------V 296
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L E I Q +QKI+ + P + G +P + L + L L+N+ + + I++
Sbjct: 297 LAAEAIAQGGIQKIMAFIAPKIIGGFSAASPVGNLGLEKMSDALSLQNVSLRQVDRDILV 356
Query: 424 EGYL 427
EGYL
Sbjct: 357 EGYL 360
>gi|172038173|ref|YP_001804674.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
gi|171699627|gb|ACB52608.1| riboflavin biosynthesis protein [Cyanothece sp. ATCC 51142]
Length = 364
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 218/364 (59%), Gaps = 17/364 (4%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M+RC+ LA + +G TSPNP+VG VIVK+GKI+GEGFH KAG+PHAEVFALR+A
Sbjct: 5 DNVDQQMMQRCLTLARRGLGYTSPNPLVGAVIVKEGKIIGEGFHLKAGEPHAEVFALREA 64
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE A G T YV+LEPCNHYGRTPPCTEALI AKV +VVVGM+DPNP+V+ KG+ RL++AG
Sbjct: 65 GEKAVGGTVYVNLEPCNHYGRTPPCTEALISAKVARVVVGMVDPNPLVSGKGIARLQEAG 124
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQL 253
I+VTVGVE+ C RLNEAF HRI+ +PF L+Y ++++G + G +G QL
Sbjct: 125 IEVTVGVEEAACLRLNEAFCHRILHNQPFGILKYAMTLDGKISSSTGHSAWVTGTKSRQL 184
Query: 254 LQEY----DAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
+ E DA+I+ ++ ++ + + + P R++ N P + L +
Sbjct: 185 VHEMRAGCDAVIVGGNTVRRDNPHLTIHQATGRNPLRVVMSRNLHLP-QDANLWNVEIAP 243
Query: 309 VIVFTDG--EITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
IVFT+ +++ + KG+E + L L V+D S+L + G +
Sbjct: 244 TIVFTEWGKNPSLQTQLRRKGVEVIELSPLIPSQVMDVLCERQLSSILWECGG------V 297
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L E I Q +QKI+ + P + G +P + L + L L+N+ + + I++
Sbjct: 298 LAAEAIAQGGIQKIMAFIAPKIIGGFSAASPVGNLGLEKMSDALSLQNVSLRQVDRDILV 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|428203269|ref|YP_007081858.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pleurocapsa
sp. PCC 7327]
gi|427980701|gb|AFY78301.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pleurocapsa
sp. PCC 7327]
Length = 377
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/364 (41%), Positives = 220/364 (60%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D MR+C++LA KA+G TSPNPMVG +IV+DGKIVG+GFHPKAGQPHAEVFALR+A EL
Sbjct: 17 DRQMMRQCLQLARKAIGKTSPNPMVGAIIVRDGKIVGKGFHPKAGQPHAEVFALREAKEL 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPCNH+GRTPPCTEALI A V KVVVGM+DP+P V G+ERL+ AGI+V
Sbjct: 77 AKGATIYVNLEPCNHHGRTPPCTEALIAAGVAKVVVGMVDPDPRVAGGGIERLKRAGIEV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GVE+E C++LNEAF+HR + +PF L+Y ++++G + G +G L+ +
Sbjct: 137 IAGVEEEACRQLNEAFVHRTLYKRPFGILKYAMTLDGKIAATTGHSAWVTGKESRHLVYQ 196
Query: 257 Y----DAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DA+I+ ++ ++ + P + + ++ P R++ P + L + +
Sbjct: 197 VRSACDAVIVGGNTVRQDN-PHLTTHQVASHNPLRVVMSRRLNLPEQ-ANLWNTDEAATL 254
Query: 311 VFTDGEITVEPDMG----TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
+FT E+ P++ TKG+E V + L+ +V + Y G SVL + G
Sbjct: 255 IFT--EVGSNPELQKQLLTKGVEIVEMELLSPLSVAKHLYDRGLSSVLWECGGT------ 306
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L E I Q +QKI+ + P + G +P L + + L L+ + + + ++
Sbjct: 307 LAAEAIAQQTIQKIMAFIAPKIIGGQTAPSPVGDLGLERMTEALQLERVTMRAIASDFLI 366
Query: 424 EGYL 427
EGYL
Sbjct: 367 EGYL 370
>gi|425442242|ref|ZP_18822497.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9717]
gi|389716840|emb|CCH98984.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9717]
Length = 365
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 218/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRTMMQRCLTLARQALGRTSPNPLVGAVIVQEGIIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIMRAGIKKVVVGMIDPNPLVAGKGIQRLESAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLP-SSAHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 VYTQIDANVKLQQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G N T + LG +L+ L+N+ + I++
Sbjct: 300 ASAIAEGMVQKIIAFIAPKIIG--GINAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|302769374|ref|XP_002968106.1| hypothetical protein SELMODRAFT_169709 [Selaginella moellendorffii]
gi|300163750|gb|EFJ30360.1| hypothetical protein SELMODRAFT_169709 [Selaginella moellendorffii]
Length = 375
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 171/369 (46%), Positives = 243/369 (65%), Gaps = 33/369 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKD-GKIVGEGFHPKAGQPHAEVFALRDA 133
+DD YMR+CVELA + +G TSPNPMVGC+IV + G+IVG GFHP+AG+PHAEVFALR+A
Sbjct: 23 RDDSDYMRQCVELARRGLGRTSPNPMVGCLIVDNAGEIVGRGFHPRAGEPHAEVFALREA 82
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
G A G+TAYVSLEPC+H GRTPPC+ AL+ A+V++VVVG +DPNP+V KG+ERLR AG
Sbjct: 83 GSKAHGSTAYVSLEPCDHVGRTPPCSRALVAARVRRVVVGTVDPNPLVAGKGVERLRRAG 142
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQL 253
++VTVGVE+ELC+ NEAF HRIVT KPFA LRY ++++G +L VA S +YSQ
Sbjct: 143 VEVTVGVEEELCRVTNEAFFHRIVTKKPFACLRYAMTIDGCLLADPSTPVAAS--FYSQQ 200
Query: 254 LQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
L+EYDA++ + +S + S E A QP R++ V++ +S ++ GL S++V
Sbjct: 201 LEEYDAVVTTEASLDADPVLLSAEQGAKQPLRVVAVTSSSSLSQLAGL---LSARVF--- 254
Query: 314 DGEITVEPDMGTKG--IETVNLHQ---------LNLKAVLDYCYSHGFCSVLVDLRGNYG 362
D ++ +G KG +ETV + ++L +VLD CY G CSVL+D +
Sbjct: 255 DTKLAPTLLLGGKGESMETVLRRKNVEVVPVNEVDLDSVLDLCYQRGACSVLLDSTAGF- 313
Query: 363 DLEML-LKEGIE---QNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSS 418
+ML +KE +E + ++QK+ V V P + GG + +S+ K L L +
Sbjct: 314 --DMLGVKEALEDEDRAVIQKLCVVVAPF---AGGGQTQKVASSMRK---LGRLTTRKCG 365
Query: 419 QSIVLEGYL 427
+++V++GY
Sbjct: 366 ENVVIQGYF 374
>gi|440752274|ref|ZP_20931477.1| riboflavin biosynthesis protein RibD [Microcystis aeruginosa
TAIHU98]
gi|440176767|gb|ELP56040.1| riboflavin biosynthesis protein RibD [Microcystis aeruginosa
TAIHU98]
Length = 365
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 218/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP+AGQPHAEVFALR A E
Sbjct: 8 DRTMMQRCLTLARQALGRTSPNPLVGSVIVQEGTIIGEGFHPEAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLASAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATTGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + KG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 VYTQIDSNVKLQQQLLIKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G N T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GINAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|414077926|ref|YP_006997244.1| riboflavin biosynthesis protein RibD [Anabaena sp. 90]
gi|413971342|gb|AFW95431.1| riboflavin biosynthesis protein RibD [Anabaena sp. 90]
Length = 393
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/364 (41%), Positives = 216/364 (59%), Gaps = 17/364 (4%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M RCVELA A+G TSPNP+VG VIV++G+IVGEGFHP AG+PHAEVFALR A
Sbjct: 32 DDFDSRMMGRCVELARTALGRTSPNPLVGAVIVQNGEIVGEGFHPCAGEPHAEVFALRAA 91
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE A G+T YVSLEPCNHYGRTPPC++ LI A V KVVVGM+DPNP+V G+ RL+ AG
Sbjct: 92 GERARGSTIYVSLEPCNHYGRTPPCSQGLINAGVSKVVVGMVDPNPLVAGSGIARLQAAG 151
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGY 249
I+V VGVE+ C+RLNE FIHRI+ +P L+Y ++++G + +G ++
Sbjct: 152 IEVIVGVEEAACRRLNEGFIHRILYQRPLGILKYAMTLDGKIATTVGHSAWVTNQDARTE 211
Query: 250 YSQLLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGL-SEESSS 307
QL DA+I+ ++ +K + S + +A+ P R++ + P + ++ES +
Sbjct: 212 VYQLRAACDAVIVGGNTVRKDNPYLTSHQVEAHNPLRVVMSRSLNLPEQARLWDTQESPT 271
Query: 308 KVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
V+ + + KG+E V L +AV+ + Y GFCSVL + G +L
Sbjct: 272 LVVTEVGSSQAFQKMLRDKGVEVVEFSSLTPEAVMSHLYERGFCSVLWECGG------IL 325
Query: 368 LKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL----LNSLGKRLILKNLQPKMSSQSIVL 423
I Q +QKI+ + P G D P + L ++ + L+L+ + ++ ++
Sbjct: 326 AARAIAQGSVQKIMAFIAPKIIGGDHA-PTPVGDLGLTNMTEALLLERVSWRVVGNDCLV 384
Query: 424 EGYL 427
EGYL
Sbjct: 385 EGYL 388
>gi|218437502|ref|YP_002375831.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7424]
gi|218170230|gb|ACK68963.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7424]
Length = 362
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 220/362 (60%), Gaps = 19/362 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+ C+ LA +A G TSPNPMVG VIVKDG+++GEGFHPKAGQPHAEVFAL+ A E
Sbjct: 6 DREMMQHCINLARQAAGKTSPNPMVGAVIVKDGQVIGEGFHPKAGQPHAEVFALKQAAEQ 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT Y+SLEPCNHYGRTPPCTEALI+A+V KVV+GM+DP+P V+ G++RL++AGI+V
Sbjct: 66 AKGATIYISLEPCNHYGRTPPCTEALIEAQVNKVVIGMIDPDPRVSGSGVKRLQEAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE++ C+RLNE FIHR+++ KPF L+Y ++++G + G +G +L+
Sbjct: 126 VVGVEEDACRRLNEGFIHRVLSKKPFGILKYAMTLDGKIATTSGHSAWITGEASRRLVHH 185
Query: 257 Y----DAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DA+I+ ++ ++ + P S ++ P R++ + P+ L E S +
Sbjct: 186 LRASCDAVIIGGNTVRQDN-PHLTSHGVSSHNPLRVVMSRSLNLPLE-AHLWETSQVPTL 243
Query: 311 VFTDGEI--TVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
VFT + ++ + + +E + L L+ V+ + Y GF SVL + G +L
Sbjct: 244 VFTQEGMNPALQKQLLKRQVEVIELKSLSPSEVMHHLYERGFSSVLWECGG------ILA 297
Query: 369 KEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
I + ++QK++ + P + G+ +P L + + L L+ + V+EG
Sbjct: 298 ARAIAEGMVQKVMAFIAPKIIGGNTAPSPVGDLGLEKMTEALQLEKVTFHQIENDFVIEG 357
Query: 426 YL 427
YL
Sbjct: 358 YL 359
>gi|390438173|ref|ZP_10226665.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis sp. T1-4]
gi|389838401|emb|CCI30789.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis sp. T1-4]
Length = 365
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 217/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRTMMQRCLTLARQALGRTSPNPLVGSVIVQEGTIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLESAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSAWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 VYTQIDANVKLQQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GIKAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|254410513|ref|ZP_05024292.1| riboflavin biosynthesis protein RibD [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182719|gb|EDX77704.1| riboflavin biosynthesis protein RibD [Coleofasciculus
chthonoplastes PCC 7420]
Length = 380
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 210/364 (57%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G TSPNP+VG VIV+DG +VGEGFHP AGQPHAE+FALR AG+
Sbjct: 26 DRTMMQRCIELARRALGRTSPNPLVGAVIVRDGAMVGEGFHPGAGQPHAEIFALRQAGDK 85
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
++GAT YV+LEPCNHYGRTPPCTEALI A V KVVVGM+DPNP+V G+ERL+ AGI+V
Sbjct: 86 SQGATIYVNLEPCNHYGRTPPCTEALIAAGVAKVVVGMVDPNPLVAGGGIERLKKAGIEV 145
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
VGVE E C++LNEAFIHRI+ +P+ L+Y ++++G + G +G Y Q
Sbjct: 146 VVGVETEACRQLNEAFIHRILHKRPWGMLKYAMTLDGKIATASGHSAWVTGQEARRYVHQ 205
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L DA+I+ +T + P S + D + P R++ PI L E + + +
Sbjct: 206 LRTACDAVIV-GGNTVRLDNPHLTSHDTDTHNPLRVVMSRTLDLPIDA-RLWETADAPTL 263
Query: 311 VFTDGEITVEPDMG----TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
V T EI PD+ KG+E + + L + Y Y +VL + G
Sbjct: 264 VLT--EIGANPDLQHQLVNKGVEVIEMTPLTPAKAMAYLYDRQLSTVLWECGGT------ 315
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L I +QK++ + P + G +P L + L L+ + + V+
Sbjct: 316 LAARAIADGTVQKVLAFIAPKIVGGITAPSPVGDLGLARMTDALTLEQVSWRQLGSDYVV 375
Query: 424 EGYL 427
EGY+
Sbjct: 376 EGYV 379
>gi|425437982|ref|ZP_18818394.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9432]
gi|389676921|emb|CCH94115.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9432]
Length = 365
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 218/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP+AGQPHAEVFALR A E
Sbjct: 8 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGTIIGEGFHPEAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLESAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 VYTQIDSNVKLKQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GIKAPTAVGDLGFQLMSEALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|425465787|ref|ZP_18845094.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9809]
gi|389831906|emb|CCI24934.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9809]
Length = 365
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 216/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRTMMQRCLTLARQALGRTSPNPLVGAVIVQEGTIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVTGKGIQRLESAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C +LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECLQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
++T D + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 LYTQIDSNVKLQQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G T + LG +L+ LKN+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GIQAPTAVGDLGFQLMSQALQLKNVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|332709146|ref|ZP_08429113.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Moorea
producens 3L]
gi|332352057|gb|EGJ31630.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Moorea
producens 3L]
Length = 372
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 215/361 (59%), Gaps = 25/361 (6%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
++RC++LA +A+G T+PNP+VGCVIV++G+IVGEGFHP AGQPHAEVFAL +AGE A+GA
Sbjct: 19 IQRCIQLARQALGRTTPNPLVGCVIVRNGEIVGEGFHPAAGQPHAEVFALSEAGENAQGA 78
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPCNHYGRTPPCTEALIKA V KVVVGM+DP+P V+ KG+ERLR AGI+V VGV
Sbjct: 79 TVYVNLEPCNHYGRTPPCTEALIKAGVAKVVVGMVDPDPRVSGKGIERLRAAGIEVVVGV 138
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQE 256
E+ C++LNE FIHRI+ +P L+Y ++++G + G +G + QL
Sbjct: 139 EESACRQLNEGFIHRILYQRPLGILKYAMTLDGKIAATSGHSKWITGEKSRSWVHQLRSA 198
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
DA+I+ ++ ++ + P S P+A P R+I P R + + +VFT
Sbjct: 199 CDAVIVGGNTVRQDN-PNLTSHNPNAPNPLRVIMSRTLDLP-RDARVWQTDDVPTLVFT- 255
Query: 315 GEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
E+ E D + +G+E V L+ L V+ Y Y VL + G +L
Sbjct: 256 -EVGTEGDLYQHLVNQGVEVVVLNPLTPSRVMAYLYDRQLSRVLWECGG------ILAAN 308
Query: 371 GIEQNLLQKIVVEVLPVWNGSDGGNPHTL----LNSLGKRLILKNLQPKMSSQSIVLEGY 426
I +QKI+ + P G GG P + L + L L+ + + V+EGY
Sbjct: 309 AIADGAVQKILAFIAPKIIGGHGG-PSPVGDLGLTLMTDALTLERVSWRQLGSDYVVEGY 367
Query: 427 L 427
+
Sbjct: 368 I 368
>gi|166366741|ref|YP_001659014.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
gi|166089114|dbj|BAG03822.1| riboflavin biosynthesis protein [Microcystis aeruginosa NIES-843]
Length = 365
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 216/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRTMMQRCLTLARQALGRTSPNPLVGAVIVQEGTIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLESAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C +LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECLQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLP-SSAHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
++T D + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 LYTQIDSNVKLQQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G T + LG +L+ LKN+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GIQAPTAVGDLGFQLMSQALQLKNVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|307153764|ref|YP_003889148.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7822]
gi|306983992|gb|ADN15873.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7822]
Length = 369
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 217/362 (59%), Gaps = 19/362 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA KA+G+TSPNPMVG VIV++ +IVGEGFHP AGQPHAEVFAL A E
Sbjct: 13 DREMMQRCITLARKALGATSPNPMVGAVIVREQEIVGEGFHPGAGQPHAEVFALSVAAEK 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT Y++LEPCNHYGRTPPCTEALIKA + KV+VGM+DP+P V+ KG+ERL +AGI+V
Sbjct: 73 AKGATIYINLEPCNHYGRTPPCTEALIKAGIAKVMVGMIDPDPRVSGKGIERLTEAGIEV 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+E+E C+RLNE FIHR++ +PF L+Y ++++G + G +G +++ +
Sbjct: 133 VAGIEEEACRRLNEGFIHRVLYQRPFGILKYAMTLDGKIAATSGHSAWVTGEASRRIVHQ 192
Query: 257 Y----DAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DA+I+ ++ ++ + P + ++ P R++ + P+ L E +
Sbjct: 193 LRAACDAVIIGGNTVRQDN-PHLTTHGVSSHNPLRVVMSRSLNLPLE-ANLWETDKVPTV 250
Query: 311 VFTDGEIT--VEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
VFT+ I ++ + + +E + L L V+ + Y GFCSVL + G L
Sbjct: 251 VFTEEGINPPLQKQLLKRKVEVIELEVLTPTQVMQHLYQRGFCSVLWECGGT------LA 304
Query: 369 KEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
I + ++QK++ + P + G +P L+ + L L+ + + V+EG
Sbjct: 305 ASAITEGMVQKVMAFIAPKIIGGESAPSPVGDLGLDKMSNALQLQRVALQRVDNDFVIEG 364
Query: 426 YL 427
YL
Sbjct: 365 YL 366
>gi|425470212|ref|ZP_18849082.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9701]
gi|389884231|emb|CCI35447.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9701]
Length = 365
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 217/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRTMMQRCLTLARQALGRTSPNPLVGSVIVQEGTIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVRAGIKKVVVGMIDPNPLVAGKGIQRLESAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T + + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 VYTQINSNVKLQQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GIQAPTAVGDLGFQLMSEALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|119486402|ref|ZP_01620460.1| riboflavin biosynthesis protein [Lyngbya sp. PCC 8106]
gi|119456304|gb|EAW37435.1| riboflavin biosynthesis protein [Lyngbya sp. PCC 8106]
Length = 368
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/365 (41%), Positives = 214/365 (58%), Gaps = 24/365 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDG-KIVGEGFHPKAGQPHAEVFALRDAGE 135
D M RC+ELA +A+G T+PNP+VG V+V+D I+GEGFHP AGQPHAEVFALRDAGE
Sbjct: 14 DRQMMLRCLELARQALGKTAPNPLVGSVVVQDNYNIIGEGFHPGAGQPHAEVFALRDAGE 73
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPCNHYGRTPPCTEALIKAKV KVVVGM+DPNP+V +G+ERL+ AGI+
Sbjct: 74 QAKGATVYVNLEPCNHYGRTPPCTEALIKAKVAKVVVGMIDPNPLVAGQGVERLKQAGIE 133
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V VGVE E C++LNE FIHRI+ +P +Y ++++G + G + Q +
Sbjct: 134 VIVGVEQEACQQLNEGFIHRILHHQPLGIFKYAMTLDGKIATTTGHSAWITSPTARQQVH 193
Query: 256 EY----DAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
+ DA+I+ ++ ++ + EP+ P R++ P++ L + + +
Sbjct: 194 QLRVACDAVIVGGNTVRRDNPHLTTHNQGEPN---PLRVVMSRKLDLPLQ-ANLWDITEA 249
Query: 308 KVIVFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+VFT D + + + KG+E V L L K V+ + Y F SVL + G
Sbjct: 250 NTLVFTTKDADPDCQEQLQKKGVEVVVLSPLTPKTVMAHLYERQFLSVLWECGGT----- 304
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIV 422
L + I + +QKI+ + P + G +P L + + L LK + +
Sbjct: 305 -LAAQAIAEGAIQKILAFIAPKIIGGKTASSPVGDLGLTQMNEALTLKRVTLHSIGSDYL 363
Query: 423 LEGYL 427
+EGYL
Sbjct: 364 IEGYL 368
>gi|428208981|ref|YP_007093334.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Chroococcidiopsis thermalis PCC 7203]
gi|428010902|gb|AFY89465.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Chroococcidiopsis thermalis PCC 7203]
Length = 389
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 211/366 (57%), Gaps = 27/366 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G T+PNP+VG V+V+DGKIVGEGFHP AGQPHAEVFAL+ AG+
Sbjct: 14 DREMMQRCLTLARRALGRTAPNPLVGAVVVQDGKIVGEGFHPGAGQPHAEVFALKAAGDR 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YVSLEPCNHYGRTPPCTEALI A V KVVVGM+DPNP+V G+ RLR AGI+V
Sbjct: 74 AQGATVYVSLEPCNHYGRTPPCTEALIAAGVAKVVVGMVDPNPLVAGGGVARLRSAGIEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LNE FIHR+V +PF +Y ++++G + G + + +Q+
Sbjct: 134 VVGVEEADCRQLNEGFIHRMVYQRPFGIFKYAMTLDGKIATTSGHSAWITNPAAREEVQQ 193
Query: 257 Y----DAIILSASSTK----KYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
DAII+ ++ + + +I ++ DA P R++ P E+ S
Sbjct: 194 LRIACDAIIVGGNTVRIDNPRLTI---RQIDAPNPLRVVMSRTLDLPTTAHLWQTETVST 250
Query: 309 VIVFTDGEITVEPDMGT----KGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+++ G PDM +G+E + L L A + + Y G SVL + G
Sbjct: 251 LVMTQAG---ANPDMQMLLRDRGVEILELDSLTPTAAMAHLYQRGCLSVLWECGGT---- 303
Query: 365 EMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSI 421
L E I Q +QKI + P + GS P L + + + L+ +Q +
Sbjct: 304 --LAAEAIAQGTVQKIFAFIAPKIIGGSTAPTPVGDLGFTQMTQAITLERVQWRTVGSDC 361
Query: 422 VLEGYL 427
++EGYL
Sbjct: 362 LMEGYL 367
>gi|443657773|ref|ZP_21131958.1| riboflavin biosynthesis protein RibD [Microcystis aeruginosa
DIANCHI905]
gi|443333112|gb|ELS47687.1| riboflavin biosynthesis protein RibD [Microcystis aeruginosa
DIANCHI905]
Length = 365
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 216/363 (59%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEV ALR A E
Sbjct: 8 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFHPGAGQPHAEVLALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVRAGIKKVVVGMIDPNPLVAGKGIQRLASAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C+++N+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQVNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVIV 311
DAII+ S+ ++ + + N P R++ + P L + S +V
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLCNHNPLRVVMTRSLDLPPS-AHLWDTSQFPTLV 246
Query: 312 FT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
+T D + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 247 YTQIDSNVKLKQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LSA 300
Query: 370 EGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVLE 424
I + ++QKI+ + P G G N T + LG +L+ L+N+ + I++E
Sbjct: 301 AAIAEGMVQKIIAFIAPKIIG--GINAPTAVGDLGFQLMSQALQLENVTVNYLNPDILIE 358
Query: 425 GYL 427
GYL
Sbjct: 359 GYL 361
>gi|159029666|emb|CAO87744.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 386
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 216/363 (59%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEV ALR A E
Sbjct: 29 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFHPGAGQPHAEVLALRQAAEK 88
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 89 ARGATLYVNLEPCNHYGRTPPCSEAIVRAGIKKVVVGMIDPNPLVAGKGIQRLASAGIET 148
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C+++N+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 149 LVGVEESECRQVNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 208
Query: 257 Y----DAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVIV 311
DAII+ S+ ++ + + N P R++ + P L + S +V
Sbjct: 209 LRSACDAIIVGGSTVRQDNPHLTTHGLCNHNPLRVVMTRSLDLPPS-AHLWDTSQFPTLV 267
Query: 312 FT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
+T D + ++ + TKG+E + L ++ V++ Y GFC VL + G L
Sbjct: 268 YTQIDSNVKLKQQLLTKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LSA 321
Query: 370 EGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVLE 424
I + ++QKI+ + P G G N T + LG +L+ L+N+ + I++E
Sbjct: 322 AAIAEGMVQKIIAFIAPKIIG--GINAPTAVGDLGFQLMSQALQLENVTVNYLNPDILIE 379
Query: 425 GYL 427
GYL
Sbjct: 380 GYL 382
>gi|282900583|ref|ZP_06308525.1| Riboflavin biosynthesis protein RibD [Cylindrospermopsis
raciborskii CS-505]
gi|281194383|gb|EFA69338.1| Riboflavin biosynthesis protein RibD [Cylindrospermopsis
raciborskii CS-505]
Length = 385
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 216/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA A+G TSPNP+VG V+VKDG+IVGEGFHP+AG+PHAEVFALR AGE
Sbjct: 17 DALMMQRCLELARLALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGEPHAEVFALRAAGER 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YVSLEPCNHYGRTPPC+ +LI A V KVVVGM+DPNP+V G+ RLR AGI+V
Sbjct: 77 ARGATIYVSLEPCNHYGRTPPCSLSLINAGVAKVVVGMVDPNPLVAGAGIARLRAAGIEV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
+GVE+E C++LNE F++R++ KP L+Y ++++G + G +++ Q
Sbjct: 137 IIGVEEEACQKLNEGFVYRVLHQKPLGILKYAMTLDGKIASNSGHSTWITNSQARSEVHQ 196
Query: 253 LLQEYDAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L DA+I+ ++ ++ + + Q+ N P R++ ++ P + ++
Sbjct: 197 LRAACDAVIVGGNTVRRDNPHLTTHQQTGYN-PLRVVMSASLNLPENAHLWDTRVAPTLV 255
Query: 311 VFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
+ +G PD + KG+E + L L V+ + Y GFC+VL + G
Sbjct: 256 LTQEGS---SPDFQQMLLQKGVEVLELPLLTPGLVMAHLYERGFCTVLWECGGT------ 306
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L I +N +QK++ + P + G D P L+S+ + L+L+ + + ++
Sbjct: 307 LAARAIAENAVQKVLAFIAPKIIGGIDAPTPVGDLGLSSMTESLVLERVNWRTIGCDFLV 366
Query: 424 EGYL 427
EGYL
Sbjct: 367 EGYL 370
>gi|425462302|ref|ZP_18841776.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9808]
gi|389824616|emb|CCI26229.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9808]
Length = 365
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 217/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP+AGQPHAEVFALR A E
Sbjct: 8 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFHPEAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVRAGIKKVVVGMIDPNPLVAGKGIQRLASAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C +LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECHQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSAWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + TKG+E + L + +V++ GFC VL + G L
Sbjct: 246 VYTQIDANVKLKQQLLTKGVEVIELTAVTPTSVMENLDQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G N T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GINAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|422301241|ref|ZP_16388610.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9806]
gi|389788576|emb|CCI15681.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9806]
Length = 365
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 217/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLASAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRAACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLP-SSAHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + TKG+E + L ++ V++ GFC VL + G L
Sbjct: 246 VYTQIDSNVKLKQQLLTKGVEVIELTEVTPTLVMENLDQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G N T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GINAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|302773850|ref|XP_002970342.1| hypothetical protein SELMODRAFT_171495 [Selaginella moellendorffii]
gi|300161858|gb|EFJ28472.1| hypothetical protein SELMODRAFT_171495 [Selaginella moellendorffii]
Length = 378
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 169/369 (45%), Positives = 241/369 (65%), Gaps = 33/369 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKD-GKIVGEGFHPKAGQPHAEVFALRDA 133
+DD YMR+CVELA + +G TSPNPMVGC+IV + G+IVG GFHP+AG+PHAEVFALR+A
Sbjct: 26 RDDSDYMRQCVELARRGLGRTSPNPMVGCLIVDNAGEIVGRGFHPRAGEPHAEVFALREA 85
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
G A G+TAYVSLEPC+H GRTPPC+ AL+ A+V++VVVG +DPNP+V KG+ERLR AG
Sbjct: 86 GSKAHGSTAYVSLEPCDHVGRTPPCSRALVAARVRRVVVGTVDPNPLVAGKGVERLRRAG 145
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQL 253
++VTVGVE+ELC+ NEAF HR+VT KPF LRY ++++G +L VA S +YSQ
Sbjct: 146 VEVTVGVEEELCRVTNEAFFHRMVTKKPFTCLRYAMTIDGCLLADPSTPVAAS--FYSQQ 203
Query: 254 LQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
L+EYDA++ + +S + S E A QP R++ V++ +S ++ GL S++V
Sbjct: 204 LEEYDAVVTTEASLDADPVLLSAEQGAKQPLRVVAVTSSSSLSKLAGL---LSARVF--- 257
Query: 314 DGEITVEPDMGTKG--IETVNLHQ---------LNLKAVLDYCYSHGFCSVLVDLRGNYG 362
D ++ +G KG IETV + ++L +VLD C G CSVL+D +
Sbjct: 258 DTKLAPTLLLGGKGESIETVLRRKNVEVVPVNEVDLDSVLDLCNQRGACSVLLDSTAGF- 316
Query: 363 DLEML-LKEGIE---QNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSS 418
+ML +KE +E + ++QK+ V V P + GG + +S+ K L L +
Sbjct: 317 --DMLGVKEALEDEDRAVIQKLCVVVGPF---AGGGQSQKIASSMRK---LGRLTTRKCG 368
Query: 419 QSIVLEGYL 427
+++V++GY
Sbjct: 369 ENVVIQGYF 377
>gi|425447718|ref|ZP_18827701.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9443]
gi|389731643|emb|CCI04313.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9443]
Length = 365
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 217/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL GI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLASVGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI T KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITTKKPFGILKYAMTLDGKIAATSGHSTWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + TKG+E + L ++ V++ GFC VL + G L
Sbjct: 246 VYTQIDSNVKLKQQLLTKGVEVIELTEVTPTLVMENLDQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G N T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GINAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|425451837|ref|ZP_18831656.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 7941]
gi|389766648|emb|CCI07746.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 7941]
Length = 365
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 216/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D ++RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRTMIQRCLTLARQALGRTSPNPLVGSVIVQEGTIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL AGI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLESAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSAWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + KG+E + L ++ V++ Y GFC VL + G L
Sbjct: 246 VYTQIDANVKLKQQLLIKGVEVIELTEVTPTLVMENLYQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GIKAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|220909715|ref|YP_002485026.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7425]
gi|219866326|gb|ACL46665.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 7425]
Length = 392
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 214/361 (59%), Gaps = 17/361 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A G T+PNP+VGCVIVKDG+IVGEGFHPKAG+PHAEVFALR AG+
Sbjct: 25 DQIMMQRCLTLARQAQGQTAPNPLVGCVIVKDGEIVGEGFHPKAGEPHAEVFALRAAGDR 84
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA++KA + +VVVGM+DP+P V+ G+ RLR AGI+V
Sbjct: 85 AVGATLYVNLEPCNHYGRTPPCSEAVVKAGIGRVVVGMVDPDPRVSGGGIARLRAAGIEV 144
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
TVGVE+ C+ LNEAFIHRI +PF L+Y ++++G + G A + +
Sbjct: 145 TVGVEEMACRDLNEAFIHRITYHRPFGILKYAMTLDGKIATAKGHSAWITDAAARTEVHR 204
Query: 253 LLQEYDAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L D +I+ ++ ++ + + E + P RI+ + P + ++++ +++
Sbjct: 205 LRAGCDGVIVGGNTVRRDNPQLTLHEVEGRNPLRIVMSRSLDLPSQAHLWQTQAAATLVL 264
Query: 312 FTDG-EITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
G + ++ + +G+E V L L V+DY Y G +VL + G L
Sbjct: 265 TQPGHSLQIKSALQAQGVEVVVLDVLTPATVMDYLYDRGLLAVLWECGGR------LAAR 318
Query: 371 GIEQNLLQKIVVEVLPVWNGSDGGNPHTL----LNSLGKRLILKNLQPKMSSQSIVLEGY 426
I + +QK+ + P G D P + L ++ + L L+ +Q + ++EGY
Sbjct: 319 AIAEGAVQKVWAFIAPKIIGGDQA-PSPVGDLGLTTMTEALQLERVQWRTIGSDCLVEGY 377
Query: 427 L 427
L
Sbjct: 378 L 378
>gi|376007777|ref|ZP_09784962.1| fused diaminohydroxyphosphoribosylaminopyrimidine
deaminase;5-amino-6-(5-phosphoribosylamino) uracil
reductase [Arthrospira sp. PCC 8005]
gi|375323753|emb|CCE20715.1| fused diaminohydroxyphosphoribosylaminopyrimidine
deaminase;5-amino-6-(5-phosphoribosylamino) uracil
reductase [Arthrospira sp. PCC 8005]
Length = 388
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 212/372 (56%), Gaps = 27/372 (7%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
Q+ + D MR C+ LA + +G T+PNP+VGCVIV+D +I+GEGFHP GQPHAE+FAL
Sbjct: 7 QSVSEFDRQMMRNCLNLAKEGLGKTAPNPLVGCVIVRDDQIIGEGFHPGPGQPHAEIFAL 66
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R AGELA GAT YV+LEPCNHYGRTPPC+EALIKA V KVV GM+DPNP+V +G+ +LR
Sbjct: 67 RSAGELARGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIAKLR 126
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
AGI+V VGVE+ C +LNEAF+HRI+ + F L+Y ++++G + G +G
Sbjct: 127 QAGIEVIVGVEESACLKLNEAFVHRIIYKQTFGILKYAMTLDGKIATDTGHSAWVTGAIA 186
Query: 251 SQLLQEY----DAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLS 302
Q + DA+I+ ++ ++ + EP+ P R++ + P L
Sbjct: 187 RQEVHRLRVACDAVIVGGNTVRRDNPHLTTHGQGEPN---PLRVVMSRSLDLPSSAR-LW 242
Query: 303 EESSSKVIVFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
+ S + IVFT E+ PD + KG+E V L V+ Y Y F SVL +
Sbjct: 243 DTSEAATIVFT--EVGSRPDFQEHLRKKGVEVVEFAPLTPAKVMSYFYERQFLSVLWECG 300
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPK 415
G L E I Q + KI+ + P + G +P + + + + L L+ + +
Sbjct: 301 GR------LASEAITQGCVHKILAFIAPKIIGGQAAPSPVGNLGFSQMTEALSLEGVSLR 354
Query: 416 MSSQSIVLEGYL 427
++EGYL
Sbjct: 355 AIGSDYLIEGYL 366
>gi|423062881|ref|ZP_17051671.1| riboflavin biosynthesis protein RibD [Arthrospira platensis C1]
gi|406715837|gb|EKD10990.1| riboflavin biosynthesis protein RibD [Arthrospira platensis C1]
Length = 388
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 213/372 (57%), Gaps = 27/372 (7%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
Q+ + D MR C+ LA + +G T+PNP+VGCVIV+D +I+GEGFHP GQPHAE+FAL
Sbjct: 7 QSVSEFDRQMMRNCLNLAKEGLGKTAPNPLVGCVIVRDDQIIGEGFHPGPGQPHAEIFAL 66
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R AGELA GAT YV+LEPCNHYGRTPPC+EALIKA V KVV GM+DPNP+V +G+ +LR
Sbjct: 67 RSAGELARGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIAKLR 126
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
+AGI+V VGVE+ C +LNEAF+HRI+ + F L+Y ++++G + G +G
Sbjct: 127 EAGIEVIVGVEESACLKLNEAFVHRIIYKQTFGILKYAMTLDGKIATDTGHSAWVTGAIA 186
Query: 251 SQLLQEY----DAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLS 302
Q + DA+I+ ++ ++ + EP+ P R++ + P L
Sbjct: 187 RQEVHRLRVACDAVIVGGNTVRRDNPHLTTHGQGEPN---PLRVVMSRSLDLPSSAR-LW 242
Query: 303 EESSSKVIVFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
+ S + IVFT E+ PD + KG+E + L V+ Y Y F SVL +
Sbjct: 243 DTSEAATIVFT--EVGSRPDFQEHLRKKGVEVLEFAPLTPAKVMSYFYERQFLSVLWECG 300
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPK 415
G L E I Q + KI+ + P + G +P + + + + L L+ + +
Sbjct: 301 GR------LASEAITQGCVHKILAFIAPKIIGGQAAPSPVGNLGFSQMTEALSLEAVSLR 354
Query: 416 MSSQSIVLEGYL 427
++EGYL
Sbjct: 355 AIGSDYLIEGYL 366
>gi|209527094|ref|ZP_03275608.1| riboflavin biosynthesis protein RibD [Arthrospira maxima CS-328]
gi|209492434|gb|EDZ92775.1| riboflavin biosynthesis protein RibD [Arthrospira maxima CS-328]
Length = 388
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 212/372 (56%), Gaps = 27/372 (7%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
Q+ + D MR C+ LA + +G T+PNP+VGCVIV+D +I+GEGFHP GQPHAE+FAL
Sbjct: 7 QSVSEFDRQMMRNCLNLAKEGLGKTAPNPLVGCVIVRDDQIIGEGFHPGPGQPHAEIFAL 66
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R AGELA GAT YV+LEPCNHYGRTPPC+EALIKA V KVV GM+DPNP+V +G+ +LR
Sbjct: 67 RSAGELARGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIAKLR 126
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
AGI+V VGVE+ C +LNEAF+HRI+ + F L+Y ++++G + G +G
Sbjct: 127 QAGIEVIVGVEESACLKLNEAFVHRIIYKQTFGILKYAMTLDGKIATDTGHSAWVTGAIA 186
Query: 251 SQLLQEY----DAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLS 302
Q + DA+I+ ++ ++ + EP+ P R++ + P L
Sbjct: 187 RQEVHRLRVACDAVIVGGNTVRRDNPHLTTHGQGEPN---PLRVVMSRSLDLPSSAR-LW 242
Query: 303 EESSSKVIVFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
+ S + IVFT E+ PD + KG+E + L V+ Y Y F SVL +
Sbjct: 243 DTSEAATIVFT--EVGSRPDFQEHLRKKGVEVLEFAPLTPAKVMSYFYERQFLSVLWECG 300
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPK 415
G L E I Q + KI+ + P + G +P + + + + L L+ + +
Sbjct: 301 GR------LASEAITQGCVHKILAFIAPKIIGGQAAPSPVGNLGFSQMTEALSLEAVSLR 354
Query: 416 MSSQSIVLEGYL 427
++EGYL
Sbjct: 355 AIGSDYLIEGYL 366
>gi|257059130|ref|YP_003137018.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802]
gi|256589296|gb|ACV00183.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8802]
Length = 360
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 17/366 (4%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N+ D M+RC++LA +A+G TSPNP+VG VIV++G+IVGEGFHPKAG+PHAE+FALR
Sbjct: 2 NSPDFDQQMMQRCLQLARQALGQTSPNPLVGSVIVQNGEIVGEGFHPKAGEPHAEIFALR 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
A E A+GAT YVSLEPCNHYGRTPPCT+ALI A V KVVVGM+DPNP+V+ KG+E+L++
Sbjct: 62 QAQERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQE 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
+GI+V VGVE+ C++LNEAFIHRI+ +P L+Y ++++G + G +G
Sbjct: 122 SGIEVVVGVEESACRQLNEAFIHRILHHQPLGILKYAMTLDGKIAATTGHSAWITGTASR 181
Query: 252 QLLQEY----DAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
QL+ + DA+I+ ++ +K + P + E P R++ P +
Sbjct: 182 QLVHQVRAACDAVIVGGNTLRKDN-PNLTTHEVAGVNPLRVVMSKTLDLPSEANLWQTDI 240
Query: 306 SSKVIVFTDGEIT-VEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+ +++ G + ++ + +G+E + L + V+ Y G SVL + G
Sbjct: 241 APTLVITERGRNSKLQAQLRDRGVEVIELASVTPSGVMQLLYERGLSSVLWECGGT---- 296
Query: 365 EMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSI 421
L + I ++QKI+ + P + G+ P L + + L L+ + + I
Sbjct: 297 --LAAQAIADGVIQKIMAFIAPKIIGGTIAPCPIGDLGLEKMTQALALQRVTLQQIDGDI 354
Query: 422 VLEGYL 427
++EGYL
Sbjct: 355 LIEGYL 360
>gi|218246081|ref|YP_002371452.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801]
gi|218166559|gb|ACK65296.1| riboflavin biosynthesis protein RibD [Cyanothece sp. PCC 8801]
Length = 360
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/367 (39%), Positives = 218/367 (59%), Gaps = 19/367 (5%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N+ D M+RC++LA +A+G TSPNP+VG VIV++G+IVGEGFHPKAG+PHAE+FALR
Sbjct: 2 NSPDFDQQMMQRCLQLARQALGQTSPNPLVGSVIVQNGEIVGEGFHPKAGEPHAEIFALR 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
A E A+GAT YVSLEPCNHYGRTPPCT+ALI A V KVVVGM+DPNP+V+ KG+E+L++
Sbjct: 62 QAQERAKGATVYVSLEPCNHYGRTPPCTDALIAAGVSKVVVGMVDPNPLVSGKGVEKLQE 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
+GI+V VGVE+ C++LNEAFIHRI+ +P L+Y ++++G + G +G
Sbjct: 122 SGIEVVVGVEESACRQLNEAFIHRILHHQPLGILKYAMTLDGKIAATTGHSAWITGTASR 181
Query: 252 QLLQEY----DAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
QL+ + DA+I+ ++ +K + P + E P R++ P L +
Sbjct: 182 QLVHQVRAACDAVIVGGNTLRKDN-PNLTTHEVAGVNPLRVVMSKTLDLPSE-ANLWQTD 239
Query: 306 SSKVIVFTD--GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
+ +V T+ ++ + +G+E + L + V+ Y G SVL + G
Sbjct: 240 IASTLVITERTRNSKLQAQLRNRGVEVIELASVTPSGVMQLLYERGLSSVLWECGGT--- 296
Query: 364 LEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQS 420
L + I ++QKI+ + P + G+ P L + + L L+ + +
Sbjct: 297 ---LAAQAIADGVIQKIMAFIAPKIIGGTIAPCPIGDLGLEKMTQALALQRVTLQQIDGD 353
Query: 421 IVLEGYL 427
I++EGYL
Sbjct: 354 ILIEGYL 360
>gi|434394049|ref|YP_007128996.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Gloeocapsa
sp. PCC 7428]
gi|428265890|gb|AFZ31836.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Gloeocapsa
sp. PCC 7428]
Length = 382
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 214/363 (58%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC++LA +A+G T+PNP+VG VIV+ G+IVGEGFHP AGQPHAEVFALR AG+
Sbjct: 17 DRAMMQRCLQLARRALGRTAPNPLVGSVIVQGGEIVGEGFHPGAGQPHAEVFALRAAGDR 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EALI AKV KVVVGM+DPNP+V G+ RLR AGI V
Sbjct: 77 ARGATVYVNLEPCNHYGRTPPCSEALIAAKVAKVVVGMVDPNPLVAGGGIARLRSAGIKV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE++ C++LNE F+HRI+ +PF L+Y ++++G + G S L+ +
Sbjct: 137 IVGVEEDDCRQLNEGFVHRILYQRPFGILKYAMTLDGKIATSSGHSAWISNQSARNLVHQ 196
Query: 257 Y----DAIILSASSTKKYSIP-ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
DA+I+ ++ + + S++ +A+ P R++ P L + + +V
Sbjct: 197 LRAACDAVIVGGNTVRNDNPRLTSRQAEAHNPLRVVMSRTLDLPTEA-YLWQTAEFPTLV 255
Query: 312 FTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T EI P + K +E V L L + + Y+ GF SVL + G L
Sbjct: 256 LT--EINANPQFQQFLRQKNVEVVELPSLTPTQAMAHLYARGFSSVLWECGGT------L 307
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTL--LNSLGKRLILKNLQPKMSSQSIVLE 424
I + +QKI+ + P + GS +P + L ++ + L L+ ++ + ++E
Sbjct: 308 AARAIAEGSVQKILAFIAPKIIGGSSAPSPISDLGLTNMNQALALERVRWQTIGSDCLVE 367
Query: 425 GYL 427
GYL
Sbjct: 368 GYL 370
>gi|298490230|ref|YP_003720407.1| riboflavin biosynthesis protein RibD ['Nostoc azollae' 0708]
gi|298232148|gb|ADI63284.1| riboflavin biosynthesis protein RibD ['Nostoc azollae' 0708]
Length = 375
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 214/365 (58%), Gaps = 25/365 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+ C++LA +A+G TSPNP+VG V+V+D +IVGEGFHP+AG+PHAEVFALR AGE
Sbjct: 17 DSLMMQWCLQLARRALGRTSPNPLVGAVVVQDREIVGEGFHPRAGEPHAEVFALRAAGEK 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YVSLEPCNHYGRTPPC+E LI A + KVVVGM+DPNP+V G+ RLR AGI+V
Sbjct: 77 AHGATIYVSLEPCNHYGRTPPCSEGLIAAGISKVVVGMVDPNPLVAGGGIARLRAAGIEV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
VGVE+ C++LNE FIHRIV +P L+Y ++++G + G ++ Q
Sbjct: 137 LVGVEEAACRQLNEGFIHRIVHKQPLGILKYAMTLDGKIATSSGHSAWITNPDARSEVHQ 196
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASP--IRIPGLSEESSSKV 309
L DA+I+ ++ ++ + + D N P R++ + P R+ ++E +
Sbjct: 197 LRAACDAVIVGGNTVRQDNPFLTCHQWDGNNPLRVVMSRSLNLPEDARLWNVAE---APT 253
Query: 310 IVFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+V T E+ PD + KG+E + L L V+ + Y GFCSVL + G
Sbjct: 254 LVLT--EVGSSPDFQKMLHGKGVEVIELPLLTPDHVMAHLYELGFCSVLWECGGT----- 306
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSIV 422
L I Q +QKI+ + P + GS P L ++ + L L+ + ++ +
Sbjct: 307 -LAASAIAQGAVQKILAFIAPKIIGGSHAPTPVGDLGFTTMTEALRLEKVCWRVVGSDCL 365
Query: 423 LEGYL 427
+EGYL
Sbjct: 366 VEGYL 370
>gi|411118160|ref|ZP_11390541.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Oscillatoriales cyanobacterium JSC-12]
gi|410711884|gb|EKQ69390.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Oscillatoriales cyanobacterium JSC-12]
Length = 363
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 217/361 (60%), Gaps = 18/361 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A G T+PNP+VGCV+V+ IVG+GFHP+AG+PHAEVFALR+AG+
Sbjct: 6 DRAMMQRCLELAKRATGKTAPNPLVGCVVVQGETIVGQGFHPRAGEPHAEVFALREAGDR 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+HYGRTPPC +A+I A VK+VVVGM+DPNP V G+ +L+ AGI+V
Sbjct: 66 AKGATLYVNLEPCSHYGRTPPCADAVIAAGVKRVVVGMIDPNPKVAGNGIAKLQKAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
TVGVE+ C+ LNEAF+HRIV +PF L+Y ++++G + + G S +
Sbjct: 126 TVGVEETDCQDLNEAFVHRIVQRQPFGILKYAMTLDGKIAARTGHSAWVSSDAARAEVHK 185
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DAII+ ++ ++ + + S+ PD P R++ + P L + + +V
Sbjct: 186 LRARCDAIIVGGNTVRQDNPLLTSRRPD-QTPLRVVMTRSLELPYDA-NLWNTTIAPTLV 243
Query: 312 FT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
FT D ++ + ++G+E + + L V+ + Y GF SVL + G L
Sbjct: 244 FTQPDANPDLQSKLRSQGVEIIEVKPLTPTIVMSHLYDRGFLSVLWECGGT------LAA 297
Query: 370 EGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEGY 426
I + +QKI + P + G+D +P + L + +L+ ++ + +++EGY
Sbjct: 298 RAIAEGTVQKIFAFIAPKIIGGADAPSPIGNLGLTKMTDAYVLERVRWRTVGPDLLVEGY 357
Query: 427 L 427
L
Sbjct: 358 L 358
>gi|158336980|ref|YP_001518155.1| riboflavin biosynthesis protein RibD [Acaryochloris marina
MBIC11017]
gi|158307221|gb|ABW28838.1| riboflavin biosynthesis protein RibD [Acaryochloris marina
MBIC11017]
Length = 387
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 217/371 (58%), Gaps = 22/371 (5%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N D M+RC++LA KA G T+PNP+VGCVI +DG+IVGEG+HPKAG+PHAEVFALR
Sbjct: 18 NIDPHHQQMMQRCLQLAQKAAGFTTPNPLVGCVIERDGEIVGEGYHPKAGEPHAEVFALR 77
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AG+ A+GATAYVSLEPCNH+GRTPPC+EAL+KA V VVVGM+DP+P V+ KG+ERLR
Sbjct: 78 AAGDKAKGATAYVSLEPCNHFGRTPPCSEALVKAGVATVVVGMVDPDPRVSGKGIERLRA 137
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESG 247
AGI V GVE+ C+R+NEAF+HRI+ +PF L+Y ++++G + G +
Sbjct: 138 AGIQVITGVEEADCQRVNEAFVHRILYQRPFGILKYAMTLDGKIATTAGHSAWITKEVAR 197
Query: 248 GYYSQLLQEYDAIILSASSTKKYS--IPASQEPDANQ----PFRIITVSNHASPIRIPGL 301
+ +L DA+I+ ++ ++ + + + DANQ P R++ P L
Sbjct: 198 AHVHRLRATCDAVIVGGNTVRRDNPHLTTHHKADANQPPNNPLRVVLSRTLDLP-PTAHL 256
Query: 302 SEESSSKVIVFTDGEITVEPD--MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
E + IV T G E + +G+E VNL +L V+ Y SVL + G
Sbjct: 257 WETDIAPTIVLTQGHPNGEGQAYLEQQGVEVVNLDELTPATVMAYLGKKELLSVLWECGG 316
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKM 416
L I +QK++ + P + G + +P L N + + L L+ ++ +
Sbjct: 317 T------LSARAIADGSVQKVLAFIAPKIVGGQNAPSPVGDLGFNKMTEALQLERVRWHI 370
Query: 417 SSQSIVLEGYL 427
+ ++EGYL
Sbjct: 371 VGEDCLVEGYL 381
>gi|425457416|ref|ZP_18837119.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9807]
gi|389801231|emb|CCI19578.1| Riboflavin biosynthesis protein ribD (Includes:
Diaminohydroxyphosphoribosylaminopyrimidine deaminase ;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Microcystis aeruginosa PCC 9807]
Length = 365
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 215/364 (59%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG VIV++G I+GEGFHP AGQPHAEVFALR A E
Sbjct: 8 DRKMMQRCLTLARQALGRTSPNPLVGSVIVQEGIIIGEGFHPGAGQPHAEVFALRQAAEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+++A +KKVVVGM+DPNP+V KG++RL GI+
Sbjct: 68 ARGATLYVNLEPCNHYGRTPPCSEAIVQAGIKKVVVGMIDPNPLVAGKGIQRLASVGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGVE+ C++LN+ FIHRI KPF L+Y ++++G + G + Q++ +
Sbjct: 128 LVGVEESECRQLNQGFIHRITAKKPFGILKYAMTLDGKIAATSGHSAWITSPASRQIVHQ 187
Query: 257 Y----DAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAII+ S+ ++ + + D N P R++ + P L + S +
Sbjct: 188 LRSACDAIIVGGSTVRQDNPHLTTHGLSDHN-PLRVVMTRSLDLPPS-AHLWDTSQFPTL 245
Query: 311 VFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+T D + ++ + TKG+E + L ++ V++ GFC VL + G L
Sbjct: 246 VYTQIDANVKLKQQLLTKGVEVIELTEVTPTLVMENLDQRGFCQVLWECGGG------LS 299
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIVL 423
I + ++QKI+ + P G G T + LG +L+ L+N+ + I++
Sbjct: 300 AAAIAEGMVQKIIAFIAPKIIG--GIKAPTAVGDLGFQLMSQALQLENVTVNYLNPDILI 357
Query: 424 EGYL 427
EGYL
Sbjct: 358 EGYL 361
>gi|113475344|ref|YP_721405.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Trichodesmium erythraeum IMS101]
gi|110166392|gb|ABG50932.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Trichodesmium erythraeum IMS101]
Length = 374
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 212/367 (57%), Gaps = 17/367 (4%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
+N ++ D M C+ELA +A+G+T+PNP+VGCVI+K+G+I+GEGFHP AG PHAEVFAL
Sbjct: 8 ENQNQLDPLIMAHCLELARRALGNTAPNPLVGCVIIKNGQIIGEGFHPGAGYPHAEVFAL 67
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
+AGE A GATAYV+LEPCNHYGRTPPCT+ALI A V +VV+GM+DPNP+V G+ +L+
Sbjct: 68 TEAGEKARGATAYVNLEPCNHYGRTPPCTDALIAAGVARVVIGMIDPNPLVAGAGVAKLQ 127
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AES 246
DAGI+V VGV + C+ LNEAFIHR++ PF L+Y ++++G + G E+
Sbjct: 128 DAGIEVVVGVLEAECRELNEAFIHRMLYHCPFGILKYAMTLDGKIATTTGHSAWVTSQEA 187
Query: 247 GGYYSQLLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
+L DA+I+ ++ ++ + S+ AN P R++ + P L + S
Sbjct: 188 RSEVHKLRAISDAVIIGGNTVRRDNPFLTSRSTQANNPLRVVMSRSLDLPTE-ANLWDVS 246
Query: 306 SSKVIVFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
++ +VFT D + + KG+E + L V+ Y GF SVL + G
Sbjct: 247 EAQTLVFTEIDSNQEFKEYLRQKGVEVLETSTLTPAVVMSNLYDRGFLSVLWECGGT--- 303
Query: 364 LEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQS 420
L + +QKI + P + G P + L + + L+N+ +
Sbjct: 304 ---LAARAMADGAVQKIWAFIAPKIIGGEIAPTPVGNLGLTKMTEAFELENISMRTVGCD 360
Query: 421 IVLEGYL 427
+LEGYL
Sbjct: 361 YLLEGYL 367
>gi|359459871|ref|ZP_09248434.1| riboflavin biosynthesis protein RibD [Acaryochloris sp. CCMEE 5410]
Length = 387
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 217/371 (58%), Gaps = 22/371 (5%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N D M+RC++LA +A G T+PNP+VGCVI +DGKIVGEG+HPKAG+PHAEVFALR
Sbjct: 18 NTDPHHQQMMQRCLQLAQQAAGFTTPNPLVGCVIERDGKIVGEGYHPKAGEPHAEVFALR 77
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AG+ A+GATAYVSLEPCNH+GRTPPC+EAL+KA V VVVGM+DP+P V+ KG+ERLR
Sbjct: 78 AAGDKAKGATAYVSLEPCNHFGRTPPCSEALVKAGVATVVVGMVDPDPRVSGKGIERLRA 137
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESG 247
AGI V GVE+ C+R+NEAF+HR++ +PF L+Y ++++G + G +
Sbjct: 138 AGIQVITGVEEADCQRVNEAFVHRVLYQRPFGILKYAMTLDGKIATTAGHSAWITKEVAR 197
Query: 248 GYYSQLLQEYDAIILSASSTKKYS--IPASQEPDANQ----PFRIITVSNHASPIRIPGL 301
+ +L DA+I+ ++ ++ + + + DANQ P R++ P L
Sbjct: 198 AHVHRLRATCDAVIVGGNTVRRDNPHLTTHHKADANQPPNNPLRVVLSRTLDLP-PTAHL 256
Query: 302 SEESSSKVIVFTDGEITVEPD--MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
E + IV T G + + +G+E VNL +L V+ Y SVL + G
Sbjct: 257 WETDIASTIVLTQGHPNGKGQAYLEKQGVEVVNLDELTPATVMAYLGEKELLSVLWECGG 316
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKM 416
L I +QK++ + P + G + +P L N + + L L+ ++ +
Sbjct: 317 T------LSARAIADGSVQKVLAFIAPKIVGGQNAPSPVGDLGFNQMTEALQLERVRWHI 370
Query: 417 SSQSIVLEGYL 427
+ ++EGYL
Sbjct: 371 VGEDCLVEGYL 381
>gi|282896327|ref|ZP_06304349.1| Riboflavin biosynthesis protein RibD [Raphidiopsis brookii D9]
gi|281198823|gb|EFA73702.1| Riboflavin biosynthesis protein RibD [Raphidiopsis brookii D9]
Length = 376
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 210/360 (58%), Gaps = 15/360 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC++LA A+G TSPNP+VG V+VKDG+IVGEGFHP+AG+PH EVFALR AGE
Sbjct: 17 DALMMQRCLQLARLALGRTSPNPLVGAVVVKDGEIVGEGFHPRAGEPHGEVFALRAAGER 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YVSLEPCNHYGRTPPC+ +LI A V KVVVGM+DPNP+V G+ RLR AGI+V
Sbjct: 77 ARGATIYVSLEPCNHYGRTPPCSLSLINAGVAKVVVGMVDPNPLVAGAGIARLRAAGIEV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
VGVE+E C++LNE F++RI+ KP L+Y ++++G + G ++ Q
Sbjct: 137 IVGVEEEACQKLNEGFVYRILHQKPLGILKYAMTLDGKIASNSGHSTWITNNQARSEVHQ 196
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDAN-QPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ ++ ++ + + A P R++ ++ P + +++
Sbjct: 197 LRAACDAVIVGGNTVRRDNPQLTTHQQAGYNPLRVVMSASLNLPENAHLWDTGVAPTLVL 256
Query: 312 FTDGEI-TVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
+G + + KG+E + L L V+ + Y GFC+VL + G L
Sbjct: 257 TQEGSSPNFQQMLLQKGVEVLELPLLTPGLVMAHLYERGFCTVLWECGGT------LAAR 310
Query: 371 GIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
I +N +QK++ + P + G P LNS+ + L+L+ + + ++EGYL
Sbjct: 311 AIAENAVQKVLAFIAPKIIGGIYAPTPVGDLGLNSMTESLVLERVNWRTVGCDCLVEGYL 370
>gi|409990954|ref|ZP_11274263.1| riboflavin biosynthesis protein [Arthrospira platensis str. Paraca]
gi|291567830|dbj|BAI90102.1| riboflavin biosynthesis protein RibD [Arthrospira platensis
NIES-39]
gi|409938182|gb|EKN79537.1| riboflavin biosynthesis protein [Arthrospira platensis str. Paraca]
Length = 387
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 213/372 (57%), Gaps = 27/372 (7%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
Q+ + D MR C+ LA + +G T+PNP+VGCVIV+D KI+GEG+HP GQPHAE+FAL
Sbjct: 7 QSVSEFDRQMMRYCLNLAKEGLGKTAPNPLVGCVIVRDQKIIGEGYHPGPGQPHAEIFAL 66
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R AGELA GAT YV+LEPCNHYGRTPPC+EALIKA V KVV GM+DPNP+V +G+ +L
Sbjct: 67 RSAGELARGATVYVNLEPCNHYGRTPPCSEALIKAGVAKVVAGMVDPNPLVGGQGIAKLC 126
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
+AGI+V VGVE+ C +LNEAF+HRI+ + F +Y ++++G + +G+ +G
Sbjct: 127 EAGIEVIVGVEESACLKLNEAFVHRIIYKQTFGIFKYAMTLDGKIATDIGDSAWVTGAIA 186
Query: 251 SQLLQEY----DAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLS 302
Q + DA+I+ ++ ++ + EP+ P R++ + P L
Sbjct: 187 RQEVHRLRVACDAVIVGGNTVRRDNPHLTTHGQGEPN---PLRVVMSRSLDLPSSAR-LW 242
Query: 303 EESSSKVIVFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
+ S + IVFT ++ PD + +G+E V L V+ Y Y F SVL +
Sbjct: 243 DTSEAATIVFT--KVGSRPDFQEHLRKRGVEVVEFAPLTPTKVMSYFYERQFLSVLWECG 300
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPK 415
G L E I Q + KI+ + P + G +P + + + + L L+ + +
Sbjct: 301 GR------LASEAITQGCVHKILAFIAPKIIGGQAAPSPVGNLGFSQMTQALSLEGVSLR 354
Query: 416 MSSQSIVLEGYL 427
++EGYL
Sbjct: 355 AIGSDYLIEGYL 366
>gi|186680558|ref|YP_001863754.1| riboflavin biosynthesis protein RibD [Nostoc punctiforme PCC 73102]
gi|186463010|gb|ACC78811.1| riboflavin biosynthesis protein RibD [Nostoc punctiforme PCC 73102]
Length = 407
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 213/371 (57%), Gaps = 29/371 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG-- 134
D M RC+ELA +A+G TSPNP+VG VIVKDG+IVGEGFHP+AG+PHAEVFAL+ AG
Sbjct: 39 DSRMMLRCLELARRALGRTSPNPLVGAVIVKDGEIVGEGFHPRAGEPHAEVFALQAAGVG 98
Query: 135 ------ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
A GAT YV+LEPCNHYGRTPPC+E LI+A V KVVVGM+DPNP+V G+ R
Sbjct: 99 AASPQENRARGATIYVNLEPCNHYGRTPPCSEGLIQAGVAKVVVGMVDPNPLVAGGGIAR 158
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----A 244
LR AGI+V VGVE+ C +LNEAF+HRI+ +P L+Y ++++G + G
Sbjct: 159 LRAAGIEVLVGVEESACHQLNEAFVHRILYKRPLGILKYAMTLDGKIATTSGHSAWVTSQ 218
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
E+ QL DAII+ ++ ++ + S +A+ P R++ +S H + L +
Sbjct: 219 EARSEVHQLRAACDAIIVGGNTVRQDNPYLTSHHLEAHNPLRVV-MSRHLNLPESAHLWK 277
Query: 304 ESSSKVIVFTDGEITVEPDMG----TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
+ + +V T + PD +G+E V L L + Y Y GFCSVL + G
Sbjct: 278 TADAPTLVLT--QKGANPDFQELLLNQGVEIVELTSLTPDNAMAYLYERGFCSVLWECGG 335
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKM 416
L I Q +QK++ + P + GS P L ++ + L L+ ++ ++
Sbjct: 336 T------LAASAIAQGAVQKVLAFIAPKIIGGSIAPTPVGDLGFTTMTEALSLERVRWRV 389
Query: 417 SSQSIVLEGYL 427
++EGY
Sbjct: 390 VGSDCLVEGYF 400
>gi|58531995|emb|CAE04095.3| OSJNBa0096F01.4 [Oryza sativa Japonica Group]
Length = 633
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 129/226 (57%), Positives = 162/226 (71%), Gaps = 5/226 (2%)
Query: 127 VFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGL 186
VFALRDA +LAE ATAYVSLEPCNHYGRTPPCTEALI AK+K VVVGM DPNPIV SKG+
Sbjct: 47 VFALRDARDLAENATAYVSLEPCNHYGRTPPCTEALINAKLKDVVVGMTDPNPIVASKGI 106
Query: 187 ERLRDAGIDVTVGVEDE-LCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE 245
ERL+ AGIDV V +E+E LC+ LNEA+IH ++TGK FATLR TLSVNG V++Q+G G +
Sbjct: 107 ERLQSAGIDVRVCMEEEALCRNLNEAYIHCMLTGKAFATLRTTLSVNGVVVNQIGTGADQ 166
Query: 246 SGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
GGYYSQLL+EYD +I+S S ++P S E A QP II S + I L EE
Sbjct: 167 PGGYYSQLLKEYDGVIISGISVNMTTLPTSHEAGAKQPLYIIIAQGGNSQLNIQFLREEC 226
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFC 351
+S+ +V TD +TV+P G+E + L +++L+ +L+ G C
Sbjct: 227 ASEAVVLTDSPVTVKP----PGVEVLVLDRMSLEFILEILAQRGLC 268
>gi|428770144|ref|YP_007161934.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Cyanobacterium
aponinum PCC 10605]
gi|428684423|gb|AFZ53890.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cyanobacterium aponinum PCC 10605]
Length = 361
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 214/365 (58%), Gaps = 25/365 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M RC++LA +A G TSPNP+VG VIVK+G+IVGEG+HP+AG PHAEV+AL+ AGE
Sbjct: 5 DLLMMNRCIQLAKQAEGKTSPNPLVGAVIVKNGEIVGEGYHPQAGLPHAEVYALKQAGER 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+ AT YV+LEPCNHYG+TPPCTEALI A VK+VVVGM+DP+ V+ +G++RL ++GI+V
Sbjct: 65 AKNATVYVNLEPCNHYGKTPPCTEALIGAGVKRVVVGMIDPDERVSGRGIKRLAESGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+GV ++ C RLNEAFIHR+ TG PF +Y ++++G + G +S ++
Sbjct: 125 KIGVAEDACLRLNEAFIHRVKTGLPFGVFKYAMTLDGKIATDTGHSQWITGKSARHFVHE 184
Query: 254 LQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L+ + ++ +T + P + ++ P R++ ++ P L ++ ++K +V
Sbjct: 185 LRSISSAVIIGGNTLRRDNPLLTTHGLTSHNPLRVVITASFDLPTSAQ-LWQQDTAKTVV 243
Query: 312 FTDGEITVEPDMGTK------GIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
FT T +PD K G+E V + LN V++ G SVL + GN
Sbjct: 244 FT----TPQPDSSLKDSLLSQGVEIVEIANLNTTMVMENLAKRGCNSVLWECGGN----- 294
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDG-GNP--HTLLNSLGKRLILKNLQPKMSSQSIV 422
L K+ I +QKI + P G G +P ++++ L LKN + +
Sbjct: 295 -LAKDAIASGNIQKIYCFIAPKIIGGKGLFSPIGDMKIDNMNNALALKNTSIRQIDADFL 353
Query: 423 LEGYL 427
+EGYL
Sbjct: 354 IEGYL 358
>gi|427711413|ref|YP_007060037.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Synechococcus sp. PCC 6312]
gi|427375542|gb|AFY59494.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Synechococcus sp. PCC 6312]
Length = 376
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 218/360 (60%), Gaps = 19/360 (5%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
FYM RC+ LA +A G TSPNP+VGCVIV+ G+IVGEGFHP+AGQPHAEVFALR AGELA+
Sbjct: 10 FYMARCLALAAQAKGRTSPNPLVGCVIVQAGEIVGEGFHPQAGQPHAEVFALRAAGELAQ 69
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPCNHYGRTPPCTEA+I+A +K VVVG++DP+P V+ +G+ERLR AG++V
Sbjct: 70 GATLYVNLEPCNHYGRTPPCTEAVIQAGIKTVVVGLIDPDPRVSGRGVERLRQAGLEVIT 129
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV + C+ LNEAFIHR++ +PF L+Y ++++G + + G A + + QL
Sbjct: 130 GVLESACRDLNEAFIHRVLHHRPFGILKYAMTLDGKMASRSGHSQWITSAAARIFVHQLR 189
Query: 255 QEYDAIILSASSTKK--YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVF 312
E DA+I+ ++ ++ S+ + Q D N P R++ +S + L + + +V
Sbjct: 190 AESDAVIVGGNTVRQDNPSLTSHQVSDHN-PLRVV-MSRQLNLPHPAHLWQTEMAPTLVL 247
Query: 313 TDGEI--TVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
T+ + + + +G+E L L + L G +VL + G +L +
Sbjct: 248 TEAALDHPLAQILQAQGVELQTLPSLTPTSALTALGERGINTVLWESGG------ILSTQ 301
Query: 371 GIEQNLLQKIVVEVLPVWNGSDGG-NPH--TLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
+ + ++QKI + P G +G P L ++ + + L+ +Q + ++L+ Y+
Sbjct: 302 ALREGMIQKIWAFIAPKIIGGEGNMTPFGDLGLETMAEAIALERVQWQPIDTEMLLQAYV 361
>gi|434387649|ref|YP_007098260.1| riboflavin biosynthesis protein RibD [Chamaesiphon minutus PCC
6605]
gi|428018639|gb|AFY94733.1| riboflavin biosynthesis protein RibD [Chamaesiphon minutus PCC
6605]
Length = 369
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 209/363 (57%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RCV LA +A G T+PNP+VG VIVKDG++VGEGFHP AGQPHAEVFALR AG+
Sbjct: 7 DRQMMQRCVHLAKQAWGKTAPNPLVGAVIVKDGEVVGEGFHPGAGQPHAEVFALRAAGDR 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YVSLEPCNHYGRTPPC AL+ A + KVVVGM+DPNP+V+ G+ L+ AGI+V
Sbjct: 67 ARGATIYVSLEPCNHYGRTPPCAAALVAAGIGKVVVGMIDPNPLVSGGGIATLQQAGIEV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
VGVE C+ LNE F+ RIV +P L+Y ++++G + G S Y
Sbjct: 127 VVGVETATCEELNEGFVQRIVHRRPLGILKYAMTLDGKIATDSGHSTWVSSEPSRHYVHH 186
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DAI++ ++ ++ + S +PDA P R++ + P+ L + S + +V
Sbjct: 187 LRAGCDAIVIGGNTLRRDNPYLTSHDPDAPNPLRVVMTRSLDVPLDAI-LWDISVAPTLV 245
Query: 312 FTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T +I V P+ + +G++ + L L V+ + Y G SVL + G L
Sbjct: 246 VT--KIGVNPETLARLRDRGVQVLELDALKPVQVMQHLYDRGCLSVLWECGGT------L 297
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLLN--SLGKRLILKNLQPKMSSQSIVLE 424
I +QK++ + P + GS +P LN S+ ++L+ + + I+++
Sbjct: 298 AASAIADGAIQKVLAFIAPKIVGGSSAPSPVGNLNIRSMSDAMVLERVSWQQIGTDILIQ 357
Query: 425 GYL 427
GYL
Sbjct: 358 GYL 360
>gi|428309910|ref|YP_007120887.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Microcoleus
sp. PCC 7113]
gi|428251522|gb|AFZ17481.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Microcoleus
sp. PCC 7113]
Length = 385
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 209/363 (57%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G T+PNP+VG VIV++G+IVGEGFHP AGQPHAE+FALR AGE
Sbjct: 28 DRAMMQRCIELARRALGRTTPNPLVGSVIVQNGEIVGEGFHPFAGQPHAEIFALRAAGEK 87
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EAL+ A V KVVVGM+DPNP+V G+ RLR AGI+V
Sbjct: 88 ARGATIYVNLEPCNHYGRTPPCSEALVAAGVTKVVVGMVDPNPLVAGGGVARLRAAGIEV 147
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
VGVE+ C++LNEAFI+RI+ +P L+Y ++++G + G +G Q
Sbjct: 148 VVGVEEAACRQLNEAFIYRILHKRPLGILKYAMTLDGKIATISGHSTWVTGQEARAQVHQ 207
Query: 253 LLQEYDAIILSASSTK-KYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ ++ + S D + P R++ P+ L + + + +V
Sbjct: 208 LRAACDAVIVGGNTVRLDNPFLTSHHSDTHNPLRVVMSRTLNLPLDA-HLWQTNDAPTLV 266
Query: 312 FTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T E+ PD + K +E V L L V++Y Y+ SVL + G L
Sbjct: 267 LT--EVGALPDFQDQLVKKKVEVVELTPLTPAKVMEYLYNRQLSSVLWECGGT------L 318
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLE 424
I +QK++ + P + G +P L ++ + L L+ + + V+E
Sbjct: 319 AARAIADGAVQKVLAFIAPKIVGGKVAPSPVGDLGLATMTEALTLERVTWRQLGPDYVVE 378
Query: 425 GYL 427
GYL
Sbjct: 379 GYL 381
>gi|22299695|ref|NP_682942.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus
BP-1]
gi|22295879|dbj|BAC09704.1| riboflavin biosynthesis protein [Thermosynechococcus elongatus
BP-1]
Length = 379
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 208/364 (57%), Gaps = 21/364 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE- 135
D YM RC+ELA +A G T+PNP+VGCVIV +G+++GEGFHPKAG+PHAEVFALR E
Sbjct: 14 DAQYMGRCLELAARAKGRTAPNPLVGCVIVAEGRVIGEGFHPKAGEPHAEVFALRSVSES 73
Query: 136 ---LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
L AT YV+LEPCNHYGRTPPCTEA++ A + KVVVGM+DPNP V G+ERLR A
Sbjct: 74 DRPLLSKATLYVNLEPCNHYGRTPPCTEAILAAGIPKVVVGMIDPNPQVAGAGVERLRSA 133
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----G 248
GI+VTVGV + C+RLNEAF+HR+ +PF L+Y ++++G + + G + SG
Sbjct: 134 GIEVTVGVREADCQRLNEAFVHRVRYQRPFGILKYAMTLDGKIASRAGHSLWVSGEAARA 193
Query: 249 YYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
QL E DA+I+ +T + P + P R++ P L + +++
Sbjct: 194 MVHQLRSECDAVIVG-GNTVRLDNPLLTSRHGHNPLRVVMSRTLDLPPDA-SLWDTTAAA 251
Query: 309 VIVFTDG--EITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
+V T + + P + +G+E V+ L AV+ + G + L + G+
Sbjct: 252 TLVVTSASPQHPLIPQLQARGVEVVHREPLTPTAVMALLHQRGIMTALWECGGS------ 305
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L I + ++QK+ + P + G D P L + + L L+++ + + I+
Sbjct: 306 LAAAAIAEGMVQKVWAFIAPKIIGGFDAPTPVADLGLTKMHEALYLEDVTWQTVGEDILA 365
Query: 424 EGYL 427
GYL
Sbjct: 366 VGYL 369
>gi|67924763|ref|ZP_00518165.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Crocosphaera watsonii WH 8501]
gi|416405813|ref|ZP_11687974.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Crocosphaera watsonii WH 0003]
gi|67853388|gb|EAM48745.1| Riboflavin biosynthesis protein RibD:Riboflavin-specific deaminase,
C-terminal [Crocosphaera watsonii WH 8501]
gi|357261229|gb|EHJ10525.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Crocosphaera watsonii WH 0003]
Length = 348
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 208/344 (60%), Gaps = 17/344 (4%)
Query: 94 STSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYG 153
+ +PNPMVG V+VK+G+I+GEGFHPK G PHAEVFALRDAGE A G T YV+LEPCNHYG
Sbjct: 6 TPNPNPMVGAVVVKNGQIIGEGFHPKPGDPHAEVFALRDAGENAAGGTVYVNLEPCNHYG 65
Query: 154 RTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFI 213
RTPPCTEALI A+V KVVVGM+DPNP+V+ KGL +L DAGI+V VGVE+ C+RLNEAF
Sbjct: 66 RTPPCTEALIAARVAKVVVGMVDPNPLVSGKGLAKLEDAGIEVIVGVEETACRRLNEAFC 125
Query: 214 HRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEY----DAIILSASSTKK 269
HRI+ + F L+Y ++++G + G +G QL+ + DA+I+ ++ ++
Sbjct: 126 HRILHHQCFGILKYAMTLDGKIATSTGHSAWVTGTTSRQLVHQTRAGCDAVIVGGNTVRR 185
Query: 270 YSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDG--EITVEPDMGTK 326
+ + + P R++ N P + L + + +VFT+ +++ ++ +K
Sbjct: 186 DNPHLTIHQATGRNPLRVVMSRNLHLP-QEANLWDVQVAPTLVFTEWGKNPSLQAELRSK 244
Query: 327 GIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLP 386
G+E + L L+ V++ Y S+L + G G + I + ++QK++ + P
Sbjct: 245 GVEVLELSPLSPAQVMEVLYERQLSSILWECGGVLG------AQAIREGVIQKVMAFMAP 298
Query: 387 -VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
+ G +P L + L+L+++ + Q I++EGYL
Sbjct: 299 KIIGGVSAASPVGDLGLEKMSDALLLESVILRQVDQDILVEGYL 342
>gi|427722155|ref|YP_007069432.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Leptolyngbya sp.
PCC 7376]
gi|427353875|gb|AFY36598.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leptolyngbya
sp. PCC 7376]
Length = 372
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 214/364 (58%), Gaps = 23/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D MRRC+ELA KA G T+PNPMVG V+VKDG+I+GEGFHP AG+PHAEVFALR+AG+
Sbjct: 13 DRKMMRRCIELAQKAAGRTAPNPMVGAVVVKDGEIIGEGFHPGAGKPHAEVFALREAGDA 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YVSLEPCNHYGRTPPC+ A++KA + KVVVGM+DP+P V+ G++ ++DAGI+
Sbjct: 73 AKGATIYVSLEPCNHYGRTPPCSLAVVKAGLAKVVVGMVDPDPRVSGGGIKTIQDAGIET 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE+ C++LNE FIHRI+ +P L+Y ++++G + G E+ +
Sbjct: 133 LVGVEEVACQQLNEGFIHRILQKQPLGILKYAMTLDGKIATTTGHSAWITHQETRNRVYE 192
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L DA+I+ +T + P + + + P R+I P + L + + + +
Sbjct: 193 LRSVCDAVIV-GGNTVRLDNPHLTTHDTTDHNPLRVIVSQTLDFP-KDRHLWDVAIAPTV 250
Query: 311 VFTDGEITVEPDMGT----KGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
V T EI P+M + +G+E +L ++ K V+ Y Y G VL + G
Sbjct: 251 VITKPEIN--PEMQSFLKEQGVEIAHLDLVSPKTVMQYLYERGCLQVLWECGGT------ 302
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L + I + +QK++ + P + G P L + + L+L+ +Q + + +L
Sbjct: 303 LSAQAIAEGTVQKVMAFIAPKIIGGKSAPTPVGDLGLTLMDEALVLEQMQLQQLGEDFLL 362
Query: 424 EGYL 427
EG L
Sbjct: 363 EGRL 366
>gi|443327399|ref|ZP_21056025.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xenococcus
sp. PCC 7305]
gi|442793021|gb|ELS02482.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xenococcus
sp. PCC 7305]
Length = 359
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 216/357 (60%), Gaps = 17/357 (4%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+RC++LA KA G TSPNP+VG VIVKDGKI+GEG+HP+AGQPHAE+FAL+DAGE A GA
Sbjct: 1 MQRCLQLANKAAGRTSPNPLVGSVIVKDGKIIGEGYHPQAGQPHAEIFALKDAGESARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPCNH+GRTPPC+EALI A V +VVVGM+D +P V G+++LR+AGI+V VG+
Sbjct: 61 TLYVNLEPCNHHGRTPPCSEALIAAGVTRVVVGMIDCDPRVAGGGIKKLRNAGIEVLVGI 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQLLQE 256
E+ C++LNEAFIHRI KPF L+Y ++++G + G +G QL
Sbjct: 121 EEAACRQLNEAFIHRITHKKPFGILKYAMTLDGKIAATTGHSAWVTGKSARHQVHQLRST 180
Query: 257 YDAIILSASSTKKYSIP-ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT-- 313
DA+I+ ++ +K + + + P R++ + P L + ++ ++FT
Sbjct: 181 CDAVIIGGNTVRKDNPQLTTHNLTEHNPLRVVMSRSLDLPTEC-NLWQVDIAQTLIFTQK 239
Query: 314 DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIE 373
+ +++ + +G+E L + +AV++ Y+ G +L + G +L I
Sbjct: 240 NSNPSLQKKLTAQGVEICELEAVTPQAVMNNFYNRGLSKILWECGG------VLAANAIA 293
Query: 374 QNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSIVLEGYL 427
+QK++ + P + G+ +P L + + L L+ ++ + Q I+++GYL
Sbjct: 294 GGAIQKVMAFIAPKIIGGNIAPSPVGDLGFTKMTEALQLERIEIQTIDQDILIKGYL 350
>gi|427735139|ref|YP_007054683.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rivularia
sp. PCC 7116]
gi|427370180|gb|AFY54136.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Rivularia
sp. PCC 7116]
Length = 399
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 220/363 (60%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D MRRC+ELA + +G TSPNPMVG VIVK+G+I+GEGFHP+AG+PHAEVFAL+ AG+
Sbjct: 43 DRTMMRRCLELARRGLGRTSPNPMVGAVIVKNGEIIGEGFHPRAGEPHAEVFALKAAGDN 102
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YVSLEPCNH+GRTPPC+EAL+ A V KVVVGM+DPNP+V G++RL++AGI+V
Sbjct: 103 ARGATIYVSLEPCNHHGRTPPCSEALVAAGVVKVVVGMVDPNPLVAGGGIQRLQEAGIEV 162
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
GVE+E C++LNE FIHRI+ +P L+Y ++++G + G ++ Q
Sbjct: 163 VSGVEEEACRKLNEGFIHRILYKQPLGILKYAMTLDGKIATTTGHSAWVTNQDARTVVRQ 222
Query: 253 LLQEYDAIILSASSTKKYSIP-ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ ++ ++ + S+ A+ P R++ P R L + S +V
Sbjct: 223 LRAGSDAVIVGGNTVRQDNPRLTSRLAGAHNPLRVVMSRTLDLP-REAHLWQTQESPTLV 281
Query: 312 FTDGEITVEPDMG----TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T E+ +PD+ +G++ V L L + + Y Y GFCSVL + G +L
Sbjct: 282 LT--ELGAKPDLQENLRKQGVKVVELSPLTPEKAMAYLYDLGFCSVLWECGG------IL 333
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLE 424
I Q +QK++ + P + GS+ P L ++ + L L+ ++ ++ ++E
Sbjct: 334 AANAIAQGAVQKVLAFIAPKIIGGSNAPTPVGDLGLTTMTQALSLERVEMRIVGSDCLVE 393
Query: 425 GYL 427
GYL
Sbjct: 394 GYL 396
>gi|443323132|ref|ZP_21052142.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Gloeocapsa
sp. PCC 73106]
gi|442787187|gb|ELR96910.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Gloeocapsa
sp. PCC 73106]
Length = 372
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 181/287 (63%), Gaps = 8/287 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+R +ELA A+G T+PNPMVG VIV+ KIVGEGFHP AGQPHAEVFAL+ AG
Sbjct: 18 DRQMMQRALELARTALGKTAPNPMVGAVIVQGEKIVGEGFHPGAGQPHAEVFALKQAGPQ 77
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPCNHYGRTPPCTEALI +V +V+VGM+DP+P V+ KG+E+L AG++V
Sbjct: 78 AKGATIYVTLEPCNHYGRTPPCTEALISMEVARVIVGMVDPDPRVSGKGIEKLLAAGMEV 137
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
VGVE + C+ LNE F+HR+ +PF TL+Y ++++G + G+ +G + Q
Sbjct: 138 IVGVETQACQELNEGFVHRVTQHRPFGTLKYAMTLDGKIATTTGDSAWITGKDSREFVYQ 197
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ S+ ++ + + A++ P R++ P+ L S+ +V
Sbjct: 198 LRAASDAVIIGGSTLRQDNPHLTTHGVADRSPLRVVMSRGLNLPLEA-NLWNIQSAPTLV 256
Query: 312 FTD--GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
T+ ++ + KG+E V L L V++Y Y FCSVL +
Sbjct: 257 LTETGANQEMQAHLREKGVEIVELEPLEPATVMEYFYQRQFCSVLWE 303
>gi|300865185|ref|ZP_07110005.1| riboflavin biosynthesis protein [Oscillatoria sp. PCC 6506]
gi|300336816|emb|CBN55155.1| riboflavin biosynthesis protein [Oscillatoria sp. PCC 6506]
Length = 388
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 216/373 (57%), Gaps = 22/373 (5%)
Query: 68 GQVQNNDKD-DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAE 126
G+ Q +D D MRRC+ELA A+G T+PNP+VG IV+DG +VGEGFHP AG PHAE
Sbjct: 21 GKTQQPRQDFDAAMMRRCIELARCALGKTAPNPLVGSAIVRDGLVVGEGFHPGAGMPHAE 80
Query: 127 VFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGL 186
VFALR+AGE A GAT YV+LEPCNHYGRTPPC+EALI A V KVVVGM+DPNP+V+ G+
Sbjct: 81 VFALREAGEKALGATVYVNLEPCNHYGRTPPCSEALIAAGVAKVVVGMVDPNPLVSGGGI 140
Query: 187 ERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAES 246
RLR+AGI+V VGVE+E C++LNEAFIHRI+ +PF L+Y ++++G + G +
Sbjct: 141 ARLREAGIEVVVGVEEEACRKLNEAFIHRILYRRPFGILKYAMTLDGKIATSSGHSAWVT 200
Query: 247 G----GYYSQLLQEYDAIILSASSTK--KYSIPASQEPDANQPFRIITVSNHASPIRIPG 300
G L DA+I+ ++ + + + QE N P R++ P +
Sbjct: 201 GEEARSQVHGLRIACDAVIVGGNTVRLDNPQLTSHQEGRHN-PLRVVMSRTLDLP-KSSR 258
Query: 301 LSEESSSKVIVFTDGEITVE--PDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
L E + +V T E +G++G+E V+L L + + Y Y F SVL +
Sbjct: 259 LWETGDASTLVLTQEGTNPEFREFLGSRGVEVVDLSPLTPASAMAYLYDRSFLSVLWECG 318
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSS 418
G +L I +QKI+ + P G G+P + + R+ ++S
Sbjct: 319 G------ILAASAIADGSVQKILAFIAPKIVGGQ-GSPSPVGDLGFARMTEAIALERVSW 371
Query: 419 QSI----VLEGYL 427
S+ ++EGYL
Sbjct: 372 HSVGADCLVEGYL 384
>gi|37520819|ref|NP_924196.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
gi|35211814|dbj|BAC89191.1| riboflavin biosynthesis protein [Gloeobacter violaceus PCC 7421]
Length = 366
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 192/324 (59%), Gaps = 16/324 (4%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
V +D+D +M RC+ LA +A G T+PNP+VG V+V DG VGEGFHPKAG PHAE FA
Sbjct: 2 VAVSDED---WMERCLALAEQAWGRTTPNPLVGAVVVNDGLAVGEGFHPKAGAPHAEAFA 58
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
LR AG+LA GAT YV+LEPCNH+GRTPPCTEA++ A +++VV+GM+DPNPIV+ +GLERL
Sbjct: 59 LRAAGDLARGATLYVNLEPCNHHGRTPPCTEAIVAAGLQRVVIGMVDPNPIVSGRGLERL 118
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
R AGI+V+VGV + C+RLNEAF H + TG+PF L+Y ++++G + G SG
Sbjct: 119 RTAGIEVSVGVLSDRCERLNEAFSHFMRTGRPFGVLKYAMTLDGKTATRTGHSFWISGQA 178
Query: 250 Y---SQLLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEE 304
+ L+ + ++ +T + P + + P R++ A P ++
Sbjct: 179 ARARTHRLRAFADAVIVGGNTVRLDDPQLTVRLAEGRNPLRVVLSRTLALPAEARLWLDQ 238
Query: 305 SSSKVIVFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
+ S +VFT G+ + + G+E L +L AVL+ S+ SVL + G
Sbjct: 239 TPSPTLVFTGAQGDPQMRSHLERLGVEVQVLDELTPAAVLEKLASYPCVSVLWECGGT-- 296
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLP 386
L + +QK++ V P
Sbjct: 297 ----LAWSALTDGSVQKVICFVAP 316
>gi|428772057|ref|YP_007163845.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Cyanobacterium
stanieri PCC 7202]
gi|428686336|gb|AFZ46196.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cyanobacterium stanieri PCC 7202]
Length = 360
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 211/362 (58%), Gaps = 18/362 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D + C+ELA KA G TSPNP+VG V+VK+G+IVG GFHP+AG PHAEVFAL++AGE
Sbjct: 5 DQKMISECLELAKKAWGRTSPNPLVGAVVVKNGQIVGRGFHPRAGSPHAEVFALKEAGEG 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYG+TPPCTEA+I+A + +VVVGM+DP+ V G++RL AGIDV
Sbjct: 65 ARGATIYVNLEPCNHYGKTPPCTEAIIRAGISRVVVGMVDPDERVAGGGIKRLVSAGIDV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
VGVE+E C++LNEAFIHR++ +P L+Y ++++G + G+ +G Y
Sbjct: 125 KVGVEEEACRKLNEAFIHRVIHKRPLGILKYAMTLDGKIATVTGDSKWITGQKSRDYVHF 184
Query: 253 LLQEYDAIILSASSTKKYSIP-ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+++ ++ +K + + ++ P R++ + P L + + +V
Sbjct: 185 LRAGCDAVVVGGNTVRKDNPRLTTHGVSSHNPLRVVMSESFDLPWDCH-LWDTIMAPTVV 243
Query: 312 FT---DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
FT D + ++ + ++G+E V L+ V+D Y GF SV + GN G
Sbjct: 244 FTLPQDVDSPLKAHLLSQGVEVVECENLSPTVVMDDLYERGFNSVFWECGGNLG------ 297
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGG-NP--HTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
I +QK++ + P G GG NP + ++ L L ++ + +++G
Sbjct: 298 ARAIASGNIQKVLGFIAPKIIGGQGGFNPVGDLGITTMQDALKLHHVSVQRFDDDFLIQG 357
Query: 426 YL 427
Y+
Sbjct: 358 YI 359
>gi|427716195|ref|YP_007064189.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Calothrix
sp. PCC 7507]
gi|427348631|gb|AFY31355.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Calothrix
sp. PCC 7507]
Length = 395
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 214/363 (58%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D MRRC+ELA +A+G TSPNP+VG VIVKDG+I+GEGFHP+AG+PHAEVFALR AG+
Sbjct: 37 DRLMMRRCLELARQALGRTSPNPLVGAVIVKDGEIIGEGFHPRAGEPHAEVFALRAAGDA 96
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YVSLEPCNHYGRTPPC+E LI+A V KVVVGM+DPNP+V G+ RL AGI+V
Sbjct: 97 ARGATIYVSLEPCNHYGRTPPCSEGLIQAGVSKVVVGMVDPNPLVAGGGIARLCAAGIEV 156
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE E C++LNE F+HRI+ +P L+Y ++++G + G ++
Sbjct: 157 VVGVEQEACQQLNEGFVHRILHKRPLGILKYAMTLDGKIATTSGHSAWVTNQDARSEVHL 216
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ ++ ++ + S + + P R++ +S + L E + + +V
Sbjct: 217 LRASCDAVIVGGNTVRQDNPYLTSHQVGFHNPLRVV-MSRQLNLPENARLWETTEAPTLV 275
Query: 312 FTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T E+ PD + +G+E V L + V+ + Y G CSVL + G L
Sbjct: 276 LT--EVGSSPDFRELLLKQGVEVVEFTSLTPEQVMAHLYDRGVCSVLWECGGT------L 327
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSIVLE 424
I Q +QKI+ + P + G+ P L S+ + L L+ ++ ++ ++E
Sbjct: 328 AASAIAQGAVQKILAFIAPKIIGGNYAPTPVGDLGFTSMTEALPLERVRWRVVGSDCLVE 387
Query: 425 GYL 427
GYL
Sbjct: 388 GYL 390
>gi|443310947|ref|ZP_21040584.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Synechocystis sp. PCC 7509]
gi|442779007|gb|ELR89263.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Synechocystis sp. PCC 7509]
Length = 389
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 207/364 (56%), Gaps = 22/364 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA A+G T+PNP+VG V+V DGKI+GEGFHP AGQPHAEVFAL AG L
Sbjct: 21 DKEIMQRCLSLARNALGRTAPNPLVGSVVVLDGKIIGEGFHPGAGQPHAEVFALIAAGNL 80
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA++ ++V KVVVGM+DP+P V G+ RLR AGI+V
Sbjct: 81 AVGATLYVNLEPCNHYGRTPPCSEAVVASQVSKVVVGMVDPDPRVAGGGIARLRSAGIEV 140
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
VGVE+ C++LNEAFIHRI+ +PF L+Y ++++G + G +G +
Sbjct: 141 VVGVEEADCRQLNEAFIHRILYQQPFGILKYAMTLDGKIATSNGHSAWITGEIARNEVHK 200
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L DA+I+ +T + P S+ DA P R++ + P + +
Sbjct: 201 LRAACDAVIVG-GNTVRLDNPKLTSRLADAANPLRVVMSRSLNLPANAHLWENMEVAPTL 259
Query: 311 VFTDGEITVEPD----MGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
+ T E+ V D + KG++ V L+ L + Y YS G SVL + G
Sbjct: 260 ILT--EVGVNRDFQQLLLAKGVKVVELNPLTPTEAMKYLYSLGLMSVLWECGGT------ 311
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVL 423
L + I +QK++ + P + G+ +P L ++ + L L+ + ++
Sbjct: 312 LAAKAIACGAVQKVLAFIAPKIIGGNQAFSPVGELDLTNMTQALTLERYHWRSVGADYLM 371
Query: 424 EGYL 427
EGYL
Sbjct: 372 EGYL 375
>gi|428213904|ref|YP_007087048.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Oscillatoria
acuminata PCC 6304]
gi|428002285|gb|AFY83128.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Oscillatoria
acuminata PCC 6304]
Length = 385
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 209/363 (57%), Gaps = 21/363 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D MRRC+ELA A+G T+PNP+VG VIVK+G+I+ EGFHP AG PHAEVFAL+ AGE
Sbjct: 28 DRAMMRRCIELAQLALGKTAPNPLVGSVIVKEGQIISEGFHPGAGHPHAEVFALQGAGEQ 87
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EALI A+V KVVVGM+D +P V+ G++RLR AGI+V
Sbjct: 88 AAGATVYVNLEPCNHYGRTPPCSEALIAARVAKVVVGMVDADPRVSGGGIQRLRSAGIEV 147
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE+E C++LNEAF+HR++ +PF L+Y ++++G + G E+
Sbjct: 148 VVGVEEEACRQLNEAFLHRVIYHRPFGILKYAMTLDGKIATTTGHSTWITSTEARHEVHT 207
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVIV 311
L DA+I+ ++ ++ + + Q P R++ P + L E S + +V
Sbjct: 208 LRAVCDAVIIGGNTVRQDNPQLTSHHTGTQNPLRVVMTRTLDLP-KAANLWEVSEAGTLV 266
Query: 312 FTDGEITVEPDMG----TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T + PDM KG+E + L L ++Y Y F SVL + G +L
Sbjct: 267 LT--QKGANPDMQQWLLNKGVEVIELDPLTPAIAMEYLYQREFLSVLWECGG------LL 318
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLE 424
I +QKI+ + P + G +P + L +G L L ++ + ++E
Sbjct: 319 AARAIADGAVQKILAFIAPKIVGGQAAPSPVGNLGLTQMGDALTLDRVKWRTIGTDCLVE 378
Query: 425 GYL 427
GYL
Sbjct: 379 GYL 381
>gi|254421232|ref|ZP_05034950.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7335]
gi|196188721|gb|EDX83685.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7335]
Length = 363
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 207/365 (56%), Gaps = 18/365 (4%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
N D MRRC ELA +A G T+PNP+VG +I++DG+IVGEGFHPKAG+PHAE+FALR
Sbjct: 7 NLGSDTDLMRRCCELAAQAAGHTAPNPLVGSIILRDGEIVGEGFHPKAGEPHAEIFALRA 66
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
A + A+GAT YV+LEPCNH G TPPC+EA+IKA +++VV+GM DPNP G+E+LR A
Sbjct: 67 ASDRAQGATLYVNLEPCNHKGLTPPCSEAVIKAGIRRVVIGMRDPNPKAKG-GIEKLRQA 125
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----G 248
GI+V VG+E + C +LNEAFIHR+ PF L+Y ++++G + G SG
Sbjct: 126 GIEVVVGIEVDRCHQLNEAFIHRVTHNSPFGILKYAMTLDGKIATTAGHSAWISGPSSRQ 185
Query: 249 YYSQLLQEYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSS 307
QL DA+I+ ++ ++ + + + + P R++ +S H L + +
Sbjct: 186 RVHQLRSRCDAVIVGGNTVRQDNPNLTSHGEGTRNPLRVV-MSRHLDLPSDRNLWKTEVA 244
Query: 308 KVIVFTDGEITVEPDMG--TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+VFT +E +G+E V L L AV+ + Y G SVL + G
Sbjct: 245 PTLVFTQTNANLETKAALVRQGVEIVALESLTPAAVMAHLYQRGAMSVLWECGG------ 298
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSIV 422
+L + I +QKI + P + G +P L ++ + L L ++ Q +
Sbjct: 299 VLAAKAIAAGSVQKIWAFIAPKLIGGQRAPSPIGELGFTAMTEALALHSVSITPVGQDFL 358
Query: 423 LEGYL 427
L+GYL
Sbjct: 359 LKGYL 363
>gi|170078074|ref|YP_001734712.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7002]
gi|169885743|gb|ACA99456.1| riboflavin biosynthesis protein RibD [Synechococcus sp. PCC 7002]
Length = 371
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/365 (38%), Positives = 208/365 (56%), Gaps = 25/365 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A G T+PNPMVG V+V+D KI+GEGFHP AGQPHAEVFALR+AG
Sbjct: 13 DRAMMQRCITLAKQAAGKTAPNPMVGAVVVQDQKIIGEGFHPGAGQPHAEVFALREAGAA 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YVSLEPCNH+GRTPPC++A++KA + KVVVGM+DPNP+V GL+ L DAGI+V
Sbjct: 73 AQGATLYVSLEPCNHHGRTPPCSQAVVKAGISKVVVGMVDPNPLVAGGGLKTLTDAGIEV 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
GVE+ C+ LN F+ R+V +P L+Y ++++G + G E+
Sbjct: 133 VTGVEEAACRALNAGFVWRMVHQRPLGILKYAMTLDGKIATTTGHSAWITHQETRNQVYD 192
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVIV 311
L + DA+++ ++ + + A+ P RI+ VS + R L + +++ +V
Sbjct: 193 LRSQCDAVVVGGNTVRLDDPYLTTHGTADHNPLRIV-VSQTLTLPRDRHLWDVTAAPTVV 251
Query: 312 FTDGEITVEPDMGT----KGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T + T P+M +G+E V+L ++ + V+ Y Y G VL + G L
Sbjct: 252 LT--QATANPEMQAFLRQQGVEVVHLDPVSPEGVMQYLYDRGCLQVLWECGGT------L 303
Query: 368 LKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMSSQSIV 422
I +QK++ + P G G T + +LG L+ L+N+Q + +
Sbjct: 304 AAAAIASGSIQKVMAFIAPKIIGGQGAP--TPVGNLGLTLMDEAITLENVQLQSIGHDFL 361
Query: 423 LEGYL 427
L G L
Sbjct: 362 LTGDL 366
>gi|56751317|ref|YP_172018.1| riboflavin biosynthesis protein RibD [Synechococcus elongatus PCC
6301]
gi|56686276|dbj|BAD79498.1| riboflavin biosynthesis protein RibD [Synechococcus elongatus PCC
6301]
Length = 368
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 187/319 (58%), Gaps = 16/319 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+RC+ELA +A G T+PNPMVGC+IV+ +IVGEGFHP AGQPHAEVFALR AG+
Sbjct: 5 DRQYMQRCLELAAQAAGQTAPNPMVGCIIVQGEEIVGEGFHPAAGQPHAEVFALRQAGDR 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA++ A +K+VVVGM+DP+P V G+ RL+ AGI+V
Sbjct: 65 ARGATLYVNLEPCNHYGRTPPCSEAVVAAGLKRVVVGMVDPDPRVTGGGIARLQQAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
TVGVE C+++NEAF+ R+ +PF L+Y ++++G + G ES
Sbjct: 125 TVGVEQAACEQMNEAFVWRVTQRRPFGILKYAMTLDGRIAASTGHSAWVSSPESRRQVHS 184
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L + DA+I+ +T + P + P R++ P+ L + + +
Sbjct: 185 LRSQVDAVIV-GGNTVRLDNPRLTCHDISDRHPLRVVMSRRLDLPLEA-NLWQTDIAPTL 242
Query: 311 VFTDGEITVEPDMGTK----GIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
VFT E T + D K G+E V L V ++ G ++L + G
Sbjct: 243 VFT--EETADRDRWRKLEDQGVEVVVRSPLTPSEVSAELFNRGLSTLLWECGGTLA--AA 298
Query: 367 LLKEGIEQNLLQKIVVEVL 385
L+EG+ Q LL I +++
Sbjct: 299 ALREGLIQKLLAFIAPKLI 317
>gi|428226814|ref|YP_007110911.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Geitlerinema
sp. PCC 7407]
gi|427986715|gb|AFY67859.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Geitlerinema sp. PCC 7407]
Length = 387
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 205/374 (54%), Gaps = 39/374 (10%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D MRRC+ LA +A+G T+PNP+VG VIVKDG+IVGEGFHP+AGQPHAEVFALR AG
Sbjct: 27 ESDRALMRRCIALACRALGQTAPNPLVGSVIVKDGEIVGEGFHPQAGQPHAEVFALRAAG 86
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A GAT YV+LEPC+H+GRTPPC +A++ A + KVVVG LDPNP V +G+ RLR AG+
Sbjct: 87 DRALGATLYVNLEPCSHHGRTPPCADAILAAGIAKVVVGSLDPNPQVAGQGIARLRAAGL 146
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS--- 251
+V VGVE C+ LNEAF HRI +PF L+Y ++++G +A +GG+ +
Sbjct: 147 EVVVGVEAAACQILNEAFFHRITHRRPFGILKYAMTLDGK--------IAATGGHSAWVT 198
Query: 252 ---------QLLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPG 300
L DA+I+ ++ ++ + P S + P R++ P
Sbjct: 199 SPGARREVHHLRATCDAVIVGGNTVRRDN-PHLTSHDVSDRHPLRVVMSRRLDLPTEA-N 256
Query: 301 LSEESSSKVIVFTDGEI----TVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
L + +VF GE+ V + +G+E V L +AV+ Y G SVL +
Sbjct: 257 LWRSQVAPTVVF--GEVGANEVVHQALAKQGVEVVLLETCTPEAVMADLYRRGLLSVLWE 314
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQ 413
G L + I Q +QK+ V P + G P L + + L ++
Sbjct: 315 CGGT------LAAQAIAQGAVQKVWAFVAPKLIGGPAAPTPVGELGLTQMTDAIALDPVR 368
Query: 414 PKMSSQSIVLEGYL 427
+ +++EGYL
Sbjct: 369 VRSVGPDLLVEGYL 382
>gi|81299014|ref|YP_399222.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Synechococcus
elongatus PCC 7942]
gi|81167895|gb|ABB56235.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Synechococcus elongatus PCC 7942]
Length = 368
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 186/319 (58%), Gaps = 16/319 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+RC+ELA +A G T+PNPMVGC+IV+ +IVGEGFHP AGQPHAEVFALR AG+
Sbjct: 5 DRQYMQRCLELAAQAAGQTAPNPMVGCIIVQGEEIVGEGFHPAAGQPHAEVFALRQAGDR 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA++ A +K+VVVGM+DP+P V G+ RL+ AGI+V
Sbjct: 65 ARGATLYVNLEPCNHYGRTPPCSEAVVAAGLKRVVVGMVDPDPRVAGGGIARLQQAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
TVGVE C+++NEAF+ R+ +PF L+Y ++++G + G ES
Sbjct: 125 TVGVEQAACEQMNEAFVWRVTQRRPFGILKYAMTLDGRIAASTGHSAWVSSPESRRQVHS 184
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L + DA+I+ +T + P + P R++ P+ L + + +
Sbjct: 185 LRSQVDAVIV-GGNTVRLDNPRLTCHDISDRHPLRVVMSRRLDLPLEA-NLWQTDIAPTL 242
Query: 311 VFTDGEITVEPDMGTK----GIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
VFT E T + D K G+E V L V ++ G ++L + G
Sbjct: 243 VFT--EETADRDRWRKLEDQGVEVVVRSPLTPSEVSAELFNRGLSTLLWECGGTLA--AA 298
Query: 367 LLKEGIEQNLLQKIVVEVL 385
L+EG Q LL I +++
Sbjct: 299 ALREGQIQKLLAFIAPKLI 317
>gi|119509555|ref|ZP_01628702.1| Riboflavin biosynthesis protein RibD [Nodularia spumigena CCY9414]
gi|119465744|gb|EAW46634.1| Riboflavin biosynthesis protein RibD [Nodularia spumigena CCY9414]
Length = 448
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 214/371 (57%), Gaps = 29/371 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA +A+G TSPNP+VG V+VKDG+IVGEGFHP AG+PHAEVFAL+ AG
Sbjct: 82 DQAMMQRCLALARRALGRTSPNPLVGAVVVKDGEIVGEGFHPCAGEPHAEVFALKAAGVG 141
Query: 137 AE--------GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
A+ GAT YV+LEPCNH+GRTPPC+EALI A V KVVVG++DPNP+V G+ R
Sbjct: 142 ADSTQENRACGATVYVNLEPCNHHGRTPPCSEALIAAGVAKVVVGIVDPNPLVGGGGIAR 201
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----A 244
LR AG++V VGVE + C +LNEAFIHRIV +P L+Y ++++G + G
Sbjct: 202 LRAAGVEVVVGVEAQACYQLNEAFIHRIVHKRPLGILKYAMTLDGKIATTSGHSAWVTNQ 261
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
++ QL DAII+ ++ +K + S + A+ P R++ +S + L +
Sbjct: 262 DARSEVHQLRAGCDAIIVGGNTVRKDNPYLTSHQVGAHNPLRVV-MSRQLNLPEDARLWD 320
Query: 304 ESSSKVIVFTDGEITVEPDMGT----KGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
+ + +VFT E PD + +G+E V L L + V+ Y GFCSVL + G
Sbjct: 321 TAEAPTVVFT--EEGSSPDFQSFLRQQGVEVVELTSLTPELVMTNLYDRGFCSVLWECGG 378
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPKM 416
L I Q +QKI+ + P + GS P L + + L L+ + ++
Sbjct: 379 T------LAASAIAQGAVQKILAFIAPKIIGGSHAATPVGDLGFTIMTEALTLERVSWRV 432
Query: 417 SSQSIVLEGYL 427
++EGYL
Sbjct: 433 VGSDCLVEGYL 443
>gi|428221126|ref|YP_007105296.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Synechococcus sp. PCC 7502]
gi|427994466|gb|AFY73161.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Synechococcus sp. PCC 7502]
Length = 364
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 204/367 (55%), Gaps = 24/367 (6%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA-- 133
+D +M+ C++LA +A G T+PNPMVG VI+KDG+++G GFHP+AGQPHAEVFA+ DA
Sbjct: 3 EDKLWMQECLKLAAQAQGMTAPNPMVGSVIIKDGRLIGAGFHPQAGQPHAEVFAIADAQA 62
Query: 134 -GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
E +GAT YV+LEPCNH+GRTPPCTEA+IKA +++VV+GM+DP+ V+ KG +RL A
Sbjct: 63 QSESTQGATLYVNLEPCNHFGRTPPCTEAIIKAGIRRVVIGMIDPDGRVSGKGCDRLIQA 122
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ 252
GI+VTVG+ +E C +LNE FIHR+ T PF L+Y ++++G + G +G Q
Sbjct: 123 GIEVTVGIAEEDCLKLNEGFIHRVKTNLPFGILKYAMTLDGKIATHTGHSYWITGSPARQ 182
Query: 253 ---LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
LL+ +++ +T + P + + P R++ P
Sbjct: 183 QVHLLRSNCDAVITGGNTVRIDNPHLTTHNLTKHSPLRVVMSRTLNLPQSANLWDMNDHE 242
Query: 308 KVIVFTD-GEITVE--PDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
K +VFT+ G + E + + +E + L +L+ KAV+ G SVL + GN
Sbjct: 243 KTLVFTESGNVNSEMVKYLTDRQVEVMALEKLSPKAVMVELGKRGCNSVLWECGGN---- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN----SLGKRLILKNLQPKMSSQS 420
L I ++QK+ + P GG + N + + L L N Q +
Sbjct: 299 --LAASAIADGVVQKVYAFIAP---KIIGGGLEAIANFGNSQMTQALALTNTQITTIGED 353
Query: 421 IVLEGYL 427
++ GYL
Sbjct: 354 YLITGYL 360
>gi|16331497|ref|NP_442225.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
gi|383323239|ref|YP_005384093.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383326408|ref|YP_005387262.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383492292|ref|YP_005409969.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384437560|ref|YP_005652285.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
gi|451815649|ref|YP_007452101.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
gi|2833460|sp|Q55158.1|RIBD_SYNY3 RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
gi|1001153|dbj|BAA10295.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
gi|339274593|dbj|BAK51080.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
gi|359272559|dbj|BAL30078.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359275729|dbj|BAL33247.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359278899|dbj|BAL36416.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407961115|dbj|BAM54355.1| riboflavin biosynthesis protein [Bacillus subtilis BEST7613]
gi|451781618|gb|AGF52587.1| riboflavin biosynthesis protein [Synechocystis sp. PCC 6803]
Length = 368
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 186/311 (59%), Gaps = 14/311 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MRRC+ LA A+G T+PNP+VG VIV+ +IVG+GFHP+AGQPH E+FAL +AG+
Sbjct: 4 DQTHMRRCLTLAKTAIGKTAPNPLVGSVIVQGDEIVGQGFHPQAGQPHGEIFALWEAGDR 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPCNH GRTPPCTEA+I+A + KVVVGM+DPNP+V KG+ RLR AGI+V
Sbjct: 64 AKGATLYVNLEPCNHQGRTPPCTEAIIQAGIAKVVVGMVDPNPLVAGKGISRLRQAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGG--YYSQ 252
VGVE+E C+RLNEAF RI +PF +Y ++++G + V S + Q
Sbjct: 124 KVGVEEEACQRLNEAFCFRIKHQRPFGIFKYAMTLDGKIATAQAHSSWVTSSSARHWVHQ 183
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L + A+I+ ++ ++ + + + P R++ + PI L ++ +K +V
Sbjct: 184 LRSQCQAVIIGGNTVRRDNPLLTNHGVGEVNPLRVVLSRSLDLPIEAQ-LWDQDVAKTLV 242
Query: 312 FTDG--EITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
T+ + + +ET+ L QL AV++ Y VL + G +L
Sbjct: 243 ITEKTCDRNTLSHLEKLEVETLVLEQLTPLAVMEELYQRNCLQVLWECGG------ILAA 296
Query: 370 EGIEQNLLQKI 380
E I +QK+
Sbjct: 297 EAIAMGTVQKV 307
>gi|428777676|ref|YP_007169463.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Halothece sp.
PCC 7418]
gi|428691955|gb|AFZ45249.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Halothece
sp. PCC 7418]
Length = 372
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 188/316 (59%), Gaps = 14/316 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC++LA + +G TSPNP+VG V+V++GKI+GEG+HP GQPHAEVFALR+AGE
Sbjct: 15 DQAMMQRCLQLARQGIGKTSPNPLVGAVVVQNGKIIGEGYHPSIGQPHAEVFALREAGEN 74
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EA+IKA +KKV++GM DPN S G ++L AGI V
Sbjct: 75 ARGATLYVNLEPCNHYGRTPPCSEAVIKAGIKKVIIGMSDPNANA-SGGRQKLEAAGISV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
VGVE++ C+ LN FIHRI+ +PF +Y ++++G + +G + Q
Sbjct: 134 LVGVEEKACRELNAGFIHRILYQRPFGIFKYAMTLDGKIATTVGHSAWVTDIPARNRVYQ 193
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSN-HASPIRIPGLSEESSSKVI 310
+ DA+I+ ++ ++ + + + P RI+ SP ++E+++ V+
Sbjct: 194 ERSQCDAVIVGGNTVRQDNPYLTTHQLTKQNPLRIVMTRRLDLSPEAHIFQTDEAATLVL 253
Query: 311 VFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
T+ + + +G+E + + L AV+ Y Y G VL + G L +
Sbjct: 254 SETE-NVQQAKQLEKQGVEVLQVSPLTPSAVMKYLYERGLARVLWECGGT------LAAK 306
Query: 371 GIEQNLLQKIVVEVLP 386
I++ +QK++ + P
Sbjct: 307 AIKEGAVQKVLAFIAP 322
>gi|428781692|ref|YP_007173478.1| riboflavin biosynthesis protein RibD [Dactylococcopsis salina PCC
8305]
gi|428695971|gb|AFZ52121.1| riboflavin biosynthesis protein RibD [Dactylococcopsis salina PCC
8305]
Length = 369
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 128/316 (40%), Positives = 182/316 (57%), Gaps = 12/316 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ LA+ +G TSPNP+VG V+V++GKIVGEG+HP G+PHAEVFALR AGE
Sbjct: 15 DRAMMKRCLSLASNGMGKTSPNPLVGAVVVQNGKIVGEGYHPGVGEPHAEVFALRQAGEQ 74
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A AT YV+LEPCNHYGRTPPC+EA+I A +KKVV+GM DPN S G +RL AGI V
Sbjct: 75 ARDATLYVNLEPCNHYGRTPPCSEAVINAGLKKVVMGMADPNATA-SGGKQRLEHAGISV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE++ C+ LN FI RIV +PF +Y ++++G + G + Q
Sbjct: 134 IVGVEEKACRELNAGFIQRIVKQRPFGIFKYAMTLDGKIATTTGHSAWVTDTPARKRVYQ 193
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSN-HASPIRIPGLSEESSSKVI 310
+ DA+I+ ++ ++ + + + P RI+ N SP + E K +
Sbjct: 194 ERSQCDAVIVGGNTVRQDNPYLTTHGVTEHNPLRIVMTRNLELSP--SAHIFETEQVKTL 251
Query: 311 VFTDGE-ITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
V T+ E + V+ + +G+E + L L V+ Y Y G VL + G G +K
Sbjct: 252 VLTETENLEVQKQLEKQGVEVLQLSPLTPSEVMKYLYERGMARVLWECGGTLG--AKAIK 309
Query: 370 EGIEQNLLQKIVVEVL 385
EG Q +L I +++
Sbjct: 310 EGAVQQILAFIAPKII 325
>gi|427417387|ref|ZP_18907570.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leptolyngbya
sp. PCC 7375]
gi|425760100|gb|EKV00953.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leptolyngbya
sp. PCC 7375]
Length = 367
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 205/358 (57%), Gaps = 22/358 (6%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M RC+ELA K G T+PNPMVG ++VKDG+IVGEGFHP+ GQPHAEVFALR AGE A GA
Sbjct: 19 MHRCLELAAKGAGRTAPNPMVGAIVVKDGQIVGEGFHPQVGQPHAEVFALRAAGEAARGA 78
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPCNH GRTPPCTEA+++A + VV+GM DPNP S G+ERLR AG++V V
Sbjct: 79 TIYVNLEPCNHTGRTPPCTEAVLQAGIATVVIGMRDPNPKA-SGGIERLRAAGVEVITDV 137
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQLLQE 256
E C+RLNEAFIHR+ +PF+ L+Y ++++G + G S + QL +
Sbjct: 138 ETVACERLNEAFIHRMRHRQPFSILKYAMTLDGKIATDTGHSAWVTSPASRRHVHQLRSQ 197
Query: 257 YDAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
DA+I+ ++ +K + + + D N P R++ + P L + + +VFT+
Sbjct: 198 CDAVIVGGNTVRKDNPRLTSHGVCDRN-PLRVVMSRSLELPTNA-HLWQTDMAPTLVFTE 255
Query: 315 GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQ 374
+ +E V+L+ L +AV + + G ++L + G + + Q
Sbjct: 256 INQKQADSILPTSVEVVSLNPLTPEAVANNLFERGLSTILWECGGTLSAV------ALRQ 309
Query: 375 NLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKR-----LILKNLQPKMSSQSIVLEGYL 427
++QK+ + P G G N T + +G R L L N++ + ++EGYL
Sbjct: 310 GVIQKVWAFIAPKLIG--GSNAQTPIGDMGVREMTEALALNNIELQKIGPDWLIEGYL 365
>gi|374995797|ref|YP_004971296.1| riboflavin biosynthesis protein RibD [Desulfosporosinus orientis
DSM 765]
gi|357214163|gb|AET68781.1| riboflavin biosynthesis protein RibD [Desulfosporosinus orientis
DSM 765]
Length = 369
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 208/378 (55%), Gaps = 31/378 (8%)
Query: 69 QVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVF 128
Q ++DK D +MRR ELA A+G TSPNP+VGCVIV D +IVGEG+H KAG PHAEV
Sbjct: 3 QTYSSDKIDEKFMRRAFELAIMALGRTSPNPLVGCVIVHDDQIVGEGYHHKAGTPHAEVH 62
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
AL AG+ A GATAYV+LEPC+H+GRTPPC +ALI+A+V +V++ M DPNP+V +G+ R
Sbjct: 63 ALAAAGDKAHGATAYVTLEPCSHFGRTPPCADALIRAQVHRVIIAMEDPNPLVAGQGINR 122
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----A 244
LR+AGI V VG+ E +NE F+ I TG PF + ++++G + + G+
Sbjct: 123 LREAGIQVEVGLLREEALLMNEVFVKAITTGLPFVVYKSAMTLDGKIATETGDSQWISNE 182
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIIT-----VSNHASPIR 297
S Y +L YD +IL S T + PA + P+ P R+I + HA
Sbjct: 183 ASRSYVHELRDRYD-VILVGSETAIHDNPALTCRLPNGKDPIRLIVDGMLRIDEHAQV-- 239
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFC 351
L+ S I+ T + E K +E V + Q + L ++ G+
Sbjct: 240 ---LNSSKQSPCIIATSRSASEEKLNRFKNLEHVEVWQYDVERYVPLNMLMRDLVHRGWT 296
Query: 352 SVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN--SLGKRLIL 409
SVL++ G L +++ L+ K+ + + P + G +G +P + L+ + ++L
Sbjct: 297 SVLLEGGGK------LAGAFLQEKLIDKVELFIAPKFIGGNGPSPLSGLHIQRMADAIML 350
Query: 410 KNLQPKMSSQSIVLEGYL 427
N+ + S + + GY+
Sbjct: 351 HNINVDIRSGDLHVWGYI 368
>gi|402572985|ref|YP_006622328.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfosporosinus meridiei DSM 13257]
gi|402254182|gb|AFQ44457.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfosporosinus meridiei DSM 13257]
Length = 372
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 209/372 (56%), Gaps = 19/372 (5%)
Query: 69 QVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVF 128
+V ++ D +MRR +ELA KAVG TSPNP+VGCV+VKD +I+GEGFH KAG PHAEV
Sbjct: 3 KVSSSTSSDEQFMRRALELAAKAVGRTSPNPLVGCVLVKDNQIIGEGFHLKAGTPHAEVH 62
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
AL AG+ A G+TAYV+LEPC+H+GRTPPC +ALI+AK+K+VVV M+DPNP+V +GL+R
Sbjct: 63 ALSTAGDQANGSTAYVTLEPCSHFGRTPPCADALIRAKIKRVVVAMMDPNPLVAGQGLDR 122
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAE 245
LR+AGI V +G+ + +RLNE FI I TG PF + ++++G + + G+ E
Sbjct: 123 LREAGIQVDLGLMNLEAQRLNEVFIKAISTGLPFVIYKSAMTLDGKIATETGDSRWISNE 182
Query: 246 SGGYYSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSE 303
++ L+ Y +IL S T PA + + P R+I + L+
Sbjct: 183 ISRKFAHQLRSYCDVILVGSETVHKDNPALTCRSINGKDPIRLIIDGSLRINENAKVLTS 242
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFCSVLVDL 357
++S I+ T + E + V++ Q + L ++ + + SV
Sbjct: 243 STASHCIIATTLSASKEKIKRLDSLPRVDVWQYDTERYVPLNKLMRDLVRNSWTSV---- 298
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN--SLGKRLILKNLQPK 415
L +++NL+ K+ + + P G +G +P + L+ + + + L +L
Sbjct: 299 --LLEGGGGLAGAMLQENLVDKVELFIAPKLVGGNGPSPLSGLHIERMAEAINLNDLSVD 356
Query: 416 MSSQSIVLEGYL 427
MS+ + + GY+
Sbjct: 357 MSTGDLHVTGYI 368
>gi|260893814|ref|YP_003239911.1| riboflavin biosynthesis protein RibD [Ammonifex degensii KC4]
gi|260865955|gb|ACX53061.1| riboflavin biosynthesis protein RibD [Ammonifex degensii KC4]
Length = 370
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 203/369 (55%), Gaps = 21/369 (5%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N K+D F+MRR +ELA KA G TSPNPMVG V+VK+G+++ EG+H +AG PHAE+ ALR
Sbjct: 2 ENLKEDEFFMRRALELALKARGRTSPNPMVGAVLVKEGRVIAEGYHRRAGMPHAEIEALR 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGE A GAT YV+LEPC H GRT PCTEA+I A +K+VVV M DPNP+V KG++ LR+
Sbjct: 62 AAGEEARGATLYVNLEPCCHVGRTGPCTEAIIAAGIKRVVVAMEDPNPLVAGKGIKILRE 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESG 247
AG++VTVGV ++ +RLNE F+ I T +PF L+ ++++G + GE E+
Sbjct: 122 AGLEVTVGVLEQEARRLNEVFVKFITTREPFVVLKVAMTLDGKIATSTGEARWITGPEAR 181
Query: 248 GYYSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPI--RIPGLSE 303
Y +L YDAI++ + K P+ ++ P A P R+I S P+ R+ L+
Sbjct: 182 AYVHELRDTYDAILVGKGTVLKDD-PSLTARLPGARDPVRVILSSLADLPLSARVLNLNS 240
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLH---QLNLKAVLDYCYSHGFCSVLVDLRGN 360
+ + V V + + KG E + Q++LK +L VLV+ G
Sbjct: 241 SAPTWVAVTEQAPPSRIKALQGKGAEVLVCGPGPQVDLKLLLKELGRREITGVLVEGGGT 300
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMS 417
+ L+ K++ V P ++ G+ P + + L LK+L K
Sbjct: 301 VN------ASFLANRLVDKVIWMVAPKIFGGTKAPGPVGGEGVEHPDRALRLKDLTVKKL 354
Query: 418 SQSIVLEGY 426
EGY
Sbjct: 355 GADFCFEGY 363
>gi|218194431|gb|EEC76858.1| hypothetical protein OsI_15040 [Oryza sativa Indica Group]
Length = 288
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 150/209 (71%), Gaps = 34/209 (16%)
Query: 65 IRCGQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPH 124
+RC + DDG Y+RRCVELA KA G TSPNPMVGCV+V+ G++VGEGFHP+AGQPH
Sbjct: 44 LRCQAQAGDMDDDGVYIRRCVELARKAAGHTSPNPMVGCVVVRGGRVVGEGFHPEAGQPH 103
Query: 125 AEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVV------------ 172
AEVFALRDAG+LAE ATAYVSLEPCNHYGRTPPCTEALI AKVK VVV
Sbjct: 104 AEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALINAKVKDVVVMWGLTYERRPRS 163
Query: 173 ---GMLDPNPIVNSKGLERLRDAGIDVTVGVEDE-LCKRLNEAFIHRIVTGKPFATLRYT 228
GM DPNPIV SKG+ERL+ AGIDV V +E+E LC++LNEA+IHR++ GK FATLR
Sbjct: 164 IVDGMTDPNPIVASKGIERLQSAGIDVRVCMEEEALCRKLNEAYIHRMLAGKAFATLR-- 221
Query: 229 LSVNGHVLDQLGEGVAESGGYYSQLLQEY 257
E+GG ++ LL+ +
Sbjct: 222 ----------------EAGGDFASLLKNF 234
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 15/139 (10%)
Query: 300 GLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAV---------LDYCYSHGF 350
GL+ E + IV DG P + +KGIE + ++++ L+ Y H
Sbjct: 154 GLTYERRPRSIV--DGMTDPNPIVASKGIERLQSAGIDVRVCMEEEALCRKLNEAYIHRM 211
Query: 351 CS--VLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI 408
+ LR GD LLK E+ L+QK+VVE+LP+W S G P L +
Sbjct: 212 LAGKAFATLREAGGDFASLLKNFQEEKLVQKVVVELLPIWAVSKG--PGHLAFGGSQSFP 269
Query: 409 LKNLQPKMSSQSIVLEGYL 427
LK++ K + ++LE Y+
Sbjct: 270 LKDVGHKEVNGCMLLEDYV 288
>gi|374581513|ref|ZP_09654607.1| riboflavin biosynthesis protein RibD [Desulfosporosinus youngiae
DSM 17734]
gi|374417595|gb|EHQ90030.1| riboflavin biosynthesis protein RibD [Desulfosporosinus youngiae
DSM 17734]
Length = 373
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 199/366 (54%), Gaps = 20/366 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
KD+ F MRR +ELA KA G TSPNP+VGCVIVKD +I+GEG+H KAG PHAEV AL AG
Sbjct: 10 KDEQF-MRRALELAAKATGRTSPNPLVGCVIVKDNEIIGEGYHHKAGTPHAEVHALAAAG 68
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A GATAYV+LEPC+H+GRTPPC +ALI+A VK+VVV M DPNP+V+ +G ERLR+AGI
Sbjct: 69 DQASGATAYVTLEPCSHFGRTPPCADALIRANVKRVVVAMQDPNPLVSGQGTERLREAGI 128
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA---ESGGYYS 251
V +GV +R NE F+ I TG PF + ++++G + + G+ ES +Y
Sbjct: 129 QVDLGVLQHEAERTNEIFLKSITTGLPFIVYKTAMTLDGKIATETGDSRWVSNESSRHYV 188
Query: 252 QLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L++ +IL S T PA + P P R+I + L+ S
Sbjct: 189 HQLRDAYDVILVGSETVIQDNPALTCRLPHGKDPVRLIVDGKLRLEEKAQVLTSSKHSPC 248
Query: 310 IVFTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFCSVLVDLRGNYGD 363
I+ T + E + +E V + Q L+ +L G+ SV
Sbjct: 249 IIATTLAASSEKVQRLQSLERVEVWQYKTERHVPLEKLLRDLVLRGWISV------LLEG 302
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN--SLGKRLILKNLQPKMSSQSI 421
L ++ L+ K + + P + G G +P + L+ ++ + + L NL M + +
Sbjct: 303 GGGLAGTLLQNKLIDKAELFIAPKFVGGTGPSPLSGLHIKAMSEAVTLDNLSFDMHTGDL 362
Query: 422 VLEGYL 427
+ GY+
Sbjct: 363 HVTGYI 368
>gi|345856626|ref|ZP_08809101.1| riboflavin biosynthesis protein RibD [Desulfosporosinus sp. OT]
gi|344330301|gb|EGW41604.1| riboflavin biosynthesis protein RibD [Desulfosporosinus sp. OT]
Length = 382
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 201/366 (54%), Gaps = 21/366 (5%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D +MRR +ELA KA+G TSPNP+VGCVIVKD ++VGEG+H KAG PHAEV AL AG+
Sbjct: 10 EDEKFMRRALELAVKAIGRTSPNPLVGCVIVKDNQVVGEGYHLKAGTPHAEVHALAAAGD 69
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GAT YV+LEPC+H+GRTPPC +ALI+A+VK+VVV M DPNP+V+ +G++RLR+AGI
Sbjct: 70 QAHGATVYVTLEPCSHFGRTPPCADALIRAEVKRVVVAMKDPNPLVSGRGIDRLREAGIK 129
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GVAESGGYYS 251
V +G+ + +NE FI I +G PF + ++++G + + G+ +S Y
Sbjct: 130 VDIGLLFQEALTINEVFIKVIASGLPFVVYKTAMTLDGKIATETGDSRWVSQEKSRQYVH 189
Query: 252 QLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
QL YD +I++ S T PA + PD P R+I + L S
Sbjct: 190 QLRDRYD-VIMAGSETVIQDNPALTCRLPDGRDPVRLIVDGQLRISEKAHVLFASQHSPC 248
Query: 310 IVFTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFCSVLVDLRGNYGD 363
I+ T + + K +E V + Q + L+ +L G+ SV
Sbjct: 249 IIATSQAASADKVAYLKSLEQVEVWQYDTPRHVPLEKLLRDLVDRGWTSV------LLEG 302
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN--SLGKRLILKNLQPKMSSQSI 421
L I++ + K+ + P G +G +P + L+ + L L +L ++S +
Sbjct: 303 GGGLAGALIKEQCVDKVEFFIAPKLVGGNGPSPLSGLHIQQMADALELHDLHVDINSGDL 362
Query: 422 VLEGYL 427
+ GY+
Sbjct: 363 HVTGYI 368
>gi|392393798|ref|YP_006430400.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390524876|gb|AFM00607.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 365
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 174/289 (60%), Gaps = 13/289 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA A+G TSPNP+VGCVIVKDG IVGEG+H KAG PHAEV AL+ AG+
Sbjct: 4 DNHYMSRALELAALAMGRTSPNPLVGCVIVKDGAIVGEGYHQKAGTPHAEVHALKAAGKH 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+G+TPPC +ALIKA +++VVV M+DPNP+V +G+ RLR+AGI V
Sbjct: 64 AQGATAYVTLEPCSHFGKTPPCADALIKAGIERVVVSMVDPNPLVGGQGVARLREAGIQV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VG++++ K LN+ F+ I TG PF + L+++G + + G+ S Y Q
Sbjct: 124 DVGLKEKEAKSLNKGFLKEIQTGLPFLLYKSALTLDGKIATESGDSKWITNEASRAYVHQ 183
Query: 253 LLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L +D +I+ S T + PA + + P R+I P++ L+ S+ I
Sbjct: 184 LRNRFD-VIMVGSETVLHDDPALNCRVDEGRDPVRLIVDGELKIPLQSAVLTSSCSAPCI 242
Query: 311 VFTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFCSV 353
+ T ++ + IE V + + + L+ +L G+ SV
Sbjct: 243 IATSASAPLDKLNALQSIENVEVWKYDSPRYVPLRHLLGDLVKRGWNSV 291
>gi|219668833|ref|YP_002459268.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DCB-2]
gi|219539093|gb|ACL20832.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DCB-2]
Length = 365
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 173/288 (60%), Gaps = 11/288 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA A+G TSPNP+VGCVIVKDG IVGEG+H KAG PHAEV AL+ AGE
Sbjct: 4 DNHYMSRALELAALAMGRTSPNPLVGCVIVKDGAIVGEGYHQKAGTPHAEVHALQAAGEH 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+G+TPPC +ALIKA +++VVV M+DPNP+V +G+ RLR AGI V
Sbjct: 64 ARGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVGGQGITRLRAAGIQV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
VG++++ + LN+ F+ + TG PF + L+++G + + G+ E+ Y
Sbjct: 124 DVGLKEKEARTLNKGFLKAMQTGLPFVLYKSALTLDGKIATESGDSKWVTNEASRAYVHR 183
Query: 254 LQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L+++ +I+ S T + PA + + P R+I P++ L+ ++ ++
Sbjct: 184 LRDHFDVIMVGSETVRQDNPALNCRIDEGRDPVRLIVDGTLQIPLQAAVLASSCTAPCLI 243
Query: 312 FTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFCSV 353
T ++ + +E V + Q + LK +L G+ SV
Sbjct: 244 ATTASAPLDKLKALRALENVEVWQYDSPRYVPLKDLLGDLVKRGWNSV 291
>gi|288818291|ref|YP_003432639.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|384129051|ref|YP_005511664.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus
TK-6]
gi|288787691|dbj|BAI69438.1| riboflavin biosynthesis protein [Hydrogenobacter thermophilus TK-6]
gi|308751888|gb|ADO45371.1| riboflavin biosynthesis protein RibD [Hydrogenobacter thermophilus
TK-6]
Length = 361
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 178/312 (57%), Gaps = 14/312 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MRR +ELA G T PNP VGCVIVKDGKI+ EG+H K G PHAE AL AG
Sbjct: 6 DHHFMRRALELAKLRKGLTHPNPTVGCVIVKDGKIIAEGYHEKVGMPHAEAVALEKAGTQ 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEG+T YV+LEPC HYGRTPPCT+A+I+AKVK+VV+ LDPNP+V+ +G+++LRDAGIDV
Sbjct: 66 AEGSTLYVTLEPCTHYGRTPPCTDAIIRAKVKRVVIATLDPNPLVSGRGVQKLRDAGIDV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGV ++ + LNE F I +P+ TL+ S++G + + GE ES + +
Sbjct: 126 CVGVLEDEARELNEDFFTYITQKRPYITLKLAQSIDGRIATKHGESQWITNQESRTFAHR 185
Query: 253 LLQEYDAIILSASSTKKY--SIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L + A+++ ++ + S+ P +QP R++ N PI L E ++K +
Sbjct: 186 LRAQATAVLVGINTVLRDDPSLTVRHIPWESQPIRVVLDPNLRIPI-TSKLVREKTAKTL 244
Query: 311 VFTDGE----ITVEPDMGTKG-IETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+ T E + + D G K + +L L+ VL Y +LV+ G +
Sbjct: 245 IITASENREKMKILEDEGIKVLLAPAEEGKLILREVLRELYFMEIMHLLVE--GGAQTIT 302
Query: 366 MLLKEGIEQNLL 377
+KE + L
Sbjct: 303 SFIKEDLYDRLF 314
>gi|398812950|ref|ZP_10571656.1| riboflavin biosynthesis protein RibD [Brevibacillus sp. BC25]
gi|398039940|gb|EJL33062.1| riboflavin biosynthesis protein RibD [Brevibacillus sp. BC25]
Length = 368
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 177/296 (59%), Gaps = 18/296 (6%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM +ELA A G TSPNPMVG VIVKDG IVG G H +AG+PHAEV ALR AG
Sbjct: 2 EQDSKYMDLALELARSARGQTSPNPMVGAVIVKDGTIVGMGAHLRAGEPHAEVHALRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC EALI A V++VVV LDPNP+V +G+E LR AG+
Sbjct: 62 EKAQGATVYVTLEPCSHYGKTPPCAEALIAADVRRVVVATLDPNPLVAGRGMEMLRAAGL 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V VGV +E K LNE F H I T +PF T++ +++G + G AE+
Sbjct: 122 EVAVGVREEEAKALNEVFFHYIQTSRPFVTVKTASTLDGKIASFTGHSRWITGAEARAEV 181
Query: 251 SQLLQEYDAIILSASSTKKYS--IPASQEPD--ANQPFRIITVSNHASPIRIP---GLSE 303
+L +++DAI++ + + A +E +QP R+I + NH +R P + +
Sbjct: 182 HELRRQHDAILIGVGTILADDPLLTARKEEQRFGSQPVRVI-LDNH---LRTPLDARVVQ 237
Query: 304 ESSSKVIVFTDGEITVEPD--MGTKGIETVNLHQ-LNLKAVLDYCYSHGFCSVLVD 356
+ +K +FT + E + +G++ + + ++ VLD G S+LV+
Sbjct: 238 NADAKTWIFTTDAASREKQELLAARGVKVITTEAPIRVEKVLDTLGELGITSLLVE 293
>gi|443317254|ref|ZP_21046670.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leptolyngbya
sp. PCC 6406]
gi|442783139|gb|ELR93063.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Leptolyngbya
sp. PCC 6406]
Length = 387
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 206/372 (55%), Gaps = 28/372 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D +M+RC+ LA +A G T+PNP+VG VIV+DG VGEG+HP+AGQPHAEVFALR AG+
Sbjct: 9 EDQRWMQRCLALAAQAAGQTAPNPLVGSVIVRDGIAVGEGYHPQAGQPHAEVFALRAAGD 68
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA+GAT YV+LEPCNH GRTPPCTEA++ A +++VVVGM+DP+P V G+ RLR AG+
Sbjct: 69 LAQGATLYVNLEPCNHTGRTPPCTEAILAAGIRRVVVGMVDPDPRVAGGGIVRLRRAGLT 128
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY----YS 251
V VG+E+ C+RLNE F+HRI+ +PF L+Y ++++G + G +
Sbjct: 129 VDVGIEEPACQRLNEGFVHRILHQRPFGILKYAMTLDGKIATTSGHSAWVTSPAARREVH 188
Query: 252 QLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRI--------PG--- 300
+L DA+I+ ++ ++ + + + PF VS+H +P+R+ P
Sbjct: 189 RLRSRCDAVIVGGNTVRRDNPHLTSHGQCDGPFG--PVSDHRNPLRVVMSRQLDLPAAAH 246
Query: 301 LSEESSSKVIVFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
L + + + +VF D + +G+E ++L L +AV+ G L +
Sbjct: 247 LWDVTVAPTVVFCGPDPNPQQHETLKEQGVEILSLPVLTPQAVMANLGDRGHLCALWECG 306
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLL--NSLGKRLILKNLQPK 415
G L I +QK+ + P + G+ +P L + L L L +
Sbjct: 307 GQLAAL------AIAAGCVQKVWAFIAPKIIGGATAPSPVAELGFTQMTDALALDKLSCQ 360
Query: 416 MSSQSIVLEGYL 427
++ GYL
Sbjct: 361 PIGPDYLITGYL 372
>gi|452824232|gb|EME31236.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Galdieria sulphuraria]
Length = 465
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 200/389 (51%), Gaps = 44/389 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D Y+RR +ELA A G+T PNP+VGCV++ K+GK+VGEG+HPKAG PHAEVFAL +AGE
Sbjct: 71 DEKYLRRTIELAKTAAGNTRPNPLVGCVVLSKEGKVVGEGYHPKAGLPHAEVFALGEAGE 130
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A G T YV+LEPCNH GRTPPCTEA++++ + +VVVGM+DP+P + G+ RLR GI
Sbjct: 131 HARGGTLYVNLEPCNHTGRTPPCTEAILRSGISRVVVGMVDPDPRTSGDGIRRLRSHGIQ 190
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ--- 252
V G+E+ C+ LN F R+ KP + +Y +S++G + G S Q
Sbjct: 191 VIDGIEERACRELNAGFCLRMKWRKPLSIFKYAMSIDGRIATSNGSSRWISNEKSRQAVH 250
Query: 253 -LLQEYDAIILSASSTKK------YSIPASQEPDAN-------------------QPFRI 286
L + DAII+ ++ +K +P Q+ + P R+
Sbjct: 251 MLRSQVDAIIIGGNTVRKDDPQLTIRLPGDQQDITSNHSHLTNTVLGKSCLGNRLHPLRV 310
Query: 287 ITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPD---MGTKGIETVNLH--QLNLKAV 341
+ S+ PI ++ +V T +E + +KG+ + L L+ V
Sbjct: 311 VVSSSMDLPIHARIFEDQEEYPTMVITRKFSKMEERKKVLRSKGVSIIELDTPTLSPSQV 370
Query: 342 LDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTL- 399
LD Y G VL + G L + +EQ+ + KIV + P + G +P
Sbjct: 371 LDCLYEWGALQVLWECGGT------LASKALEQDCIHKIVTFIAPKIVGGVSSPSPFASF 424
Query: 400 -LNSLGKRLILKNLQPKMSSQSIVLEGYL 427
+ + + ++L +L + ++EGY
Sbjct: 425 EIQEMSQAIVLHSLNFQKVDGDFMVEGYF 453
>gi|428306827|ref|YP_007143652.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Crinalium
epipsammum PCC 9333]
gi|428248362|gb|AFZ14142.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Crinalium
epipsammum PCC 9333]
Length = 384
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 210/362 (58%), Gaps = 19/362 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+RC+ELA +A+G T+PNP+VG VIVKDG+I+GEGFHP AG PHAEVFALR+AG+L
Sbjct: 26 DRAMMQRCIELARRALGRTAPNPLVGAVIVKDGQIIGEGFHPGAGNPHAEVFALREAGDL 85
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYGRTPPC+EAL+ A V KVVVGM+DP+P V+ G+ RL+ AGI+V
Sbjct: 86 AVGATIYVNLEPCNHYGRTPPCSEALVAAGVAKVVVGMVDPDPRVSGGGIARLQQAGIEV 145
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGVE+E C++LNEAFIHRI+ +PF L+Y ++++G + G ++ Q
Sbjct: 146 VVGVEEEACRQLNEAFIHRILYQRPFGILKYAMTLDGKIATTTGHSAWITSPDARHIVHQ 205
Query: 253 LLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L DA+I+ +T + P S + + P R++ N P L E + + +
Sbjct: 206 LRAACDAVIV-GGNTVRLDNPKLTSHQTYTHNPLRVVMSRNLDLPTDA-YLWETTDAPTL 263
Query: 311 VFTDGEIT--VEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V T+ + + + K +E V L L V++Y Y SVL + G L
Sbjct: 264 VLTEANSSPYFQQMLLKKNVEVVELTPLTPTKVMEYLYQRNLLSVLWECGGT------LA 317
Query: 369 KEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLEG 425
I Q +QK++ + P + G +P L + + L+ + + +LEG
Sbjct: 318 ASAIAQAAVQKVLAFIAPKIVGGKTAPSPVGDLGLAMMTDAITLERVTWRPVGSDCMLEG 377
Query: 426 YL 427
YL
Sbjct: 378 YL 379
>gi|89894408|ref|YP_517895.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Desulfitobacterium hafniense Y51]
gi|423073999|ref|ZP_17062734.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DP7]
gi|89333856|dbj|BAE83451.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Desulfitobacterium hafniense Y51]
gi|361855148|gb|EHL07145.1| riboflavin biosynthesis protein RibD [Desulfitobacterium hafniense
DP7]
Length = 372
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 174/288 (60%), Gaps = 11/288 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA A+G TSPNP+VGCVIVKDG IVGEG+H KAG PHAEV AL+ AGE
Sbjct: 11 DNHYMSRALELAALAMGRTSPNPLVGCVIVKDGVIVGEGYHQKAGTPHAEVHALQAAGEH 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+G+TPPC +ALIKA +++VVV M+DPNP+V+ +G+ RLR AGI V
Sbjct: 71 ARGATAYVTLEPCSHFGKTPPCADALIKAGIQRVVVAMVDPNPLVSGQGITRLRAAGIQV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA---ESGGYYSQL 253
VG++++ + LN+ F+ + TG PF + L+++G + + G+ E+ Y
Sbjct: 131 DVGLKEKEARTLNKGFLKAMQTGLPFVLYKSALTLDGKIATESGDSKWVSNEASRAYVHR 190
Query: 254 LQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L+++ +I+ S T + PA + + P R++ P++ L+ ++ ++
Sbjct: 191 LRDHFDVIMVGSETVRQDNPALNCRIDEGRDPVRLLVDGALQIPLQAAVLASSCTAPCLI 250
Query: 312 FTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFCSV 353
T ++ + +E V + Q + LK +L G+ SV
Sbjct: 251 ATTASAPLDKLKALRALENVEVWQYDSPRYVPLKDLLGDLVKRGWNSV 298
>gi|388494100|gb|AFK35116.1| unknown [Medicago truncatula]
Length = 219
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 148/216 (68%), Gaps = 4/216 (1%)
Query: 216 IVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAIILSASSTKKY----S 271
++TGKP TLRY+LSVNG++LD LG GV +SGGYYS+LLQEYDA+ILS+S ++
Sbjct: 1 MLTGKPLLTLRYSLSVNGNLLDSLGNGVTDSGGYYSRLLQEYDAVILSSSLFRENLSANP 60
Query: 272 IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETV 331
+P S+EP ANQP RII + S IP + E + K I+FT+ P+ +G+E V
Sbjct: 61 VPTSKEPGANQPIRIIMHKDSGSSNPIPLVINEVTDKAIIFTNCRTATTPEEAQQGVEIV 120
Query: 332 NLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGS 391
++ Q+NL +LDYC G CSVL+D+RGN+ + E L+KEGI++ + K V EVLPVWNG
Sbjct: 121 SMDQINLDVILDYCNRQGLCSVLLDVRGNFSEYEDLVKEGIKKKYINKFVTEVLPVWNGC 180
Query: 392 DGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
+P L +L + + ++NL+P S+QS+V+EGYL
Sbjct: 181 TKNDPLLPLKNLDQGVKVENLRPMASAQSVVIEGYL 216
>gi|414152820|ref|ZP_11409149.1| fused diaminohydroxyphosphoribosylaminopyrimidine
deaminase;5-amino-6-(5-phosphoribosylamino) uracil
reductase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411456010|emb|CCO07051.1| fused diaminohydroxyphosphoribosylaminopyrimidine
deaminase;5-amino-6-(5-phosphoribosylamino) uracil
reductase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 375
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/251 (46%), Positives = 154/251 (61%), Gaps = 7/251 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA KA G TSPNPMVG VIVKDG++VG GFH +AG HAEV AL +AGE
Sbjct: 4 DRHYMQMALELAAKARGRTSPNPMVGAVIVKDGRVVGRGFHARAGSAHAEVVALAEAGEQ 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H+GRT PCTEAL+KA V++VV M DPNP+V KGL L+ AG++V
Sbjct: 64 ARGATVYVTLEPCCHHGRTGPCTEALLKAGVQRVVAAMTDPNPLVAGKGLAVLQKAGVEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
G+ E +RLNE FI I TG+PF ++ S++G + GE + Y +
Sbjct: 124 ACGLLAEEARRLNEVFIKYITTGRPFVVMKAATSLDGKIATATGESKWITNTAARAYGHR 183
Query: 253 LLQEYDAIILSASS--TKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L YDAI++ ++ T S+ A E P R+I SN +P L++ S++
Sbjct: 184 LRDMYDAILVGVNTVLTDDPSLTARLPEGRGKDPIRVILDSNARTPTATKILTQLSAAHT 243
Query: 310 IVFTDGEITVE 320
I+ T + VE
Sbjct: 244 IIATTEQAPVE 254
>gi|323702710|ref|ZP_08114371.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans
DSM 574]
gi|333923266|ref|YP_004496846.1| riboflavin biosynthesis protein RibD [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532373|gb|EGB22251.1| riboflavin biosynthesis protein RibD [Desulfotomaculum nigrificans
DSM 574]
gi|333748827|gb|AEF93934.1| riboflavin biosynthesis protein RibD [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 375
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 151/247 (61%), Gaps = 13/247 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ +ELA KA G TSPNPMVG V+VKDG++VG+G+H KAG HAEV AL DAGE
Sbjct: 4 DKHFMQMALELARKARGRTSPNPMVGAVVVKDGQVVGQGWHAKAGTAHAEVVALADAGEQ 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H+GRT PCTEAL+KA VK+VV M DPNP+V KGL LRDAG++V
Sbjct: 64 ARGATVYVTLEPCCHHGRTGPCTEALLKAGVKRVVAAMTDPNPLVAGKGLAILRDAGVEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS----Q 252
VGV + ++LNE FI I TG+PF L+ S++G + GE +G +
Sbjct: 124 QVGVLESEARQLNEIFIKYITTGRPFVVLKAATSLDGKIATATGESKWITGAAARTEGHR 183
Query: 253 LLQEYDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
L YDAI IL+ +P + D P R++ S +P L ++S+
Sbjct: 184 LRDIYDAILVGVNTILADDPALTTRLPEGRGKD---PIRVVVDSTARTPTSARVLIQQSA 240
Query: 307 SKVIVFT 313
+ I+ T
Sbjct: 241 AHTIIAT 247
>gi|86609303|ref|YP_478065.1| riboflavin biosynthesis protein RibD [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557845|gb|ABD02802.1| riboflavin biosynthesis protein RibD [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 370
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 176/318 (55%), Gaps = 10/318 (3%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D +M RC+ LA SPNP V CVIV+ ++VGEG HP AGQPHAEV AL+ AG
Sbjct: 3 SDQQWMERCLSLARSTPQRPSPNPRVSCVIVQGDRVVGEGVHPGAGQPHAEVLALQQAGS 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GAT YV+LEPCNHYGRTPPCTEA++ A +++VVVGM DPNP+V KG+ RL++AGID
Sbjct: 63 LARGATLYVNLEPCNHYGRTPPCTEAILAAGIRRVVVGMQDPNPLVAGKGIRRLQEAGID 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
VTVGV + C+ LNE F IV + F L+Y ++++G G S Q +
Sbjct: 123 VTVGVLERECQELNEGFAFAIVRQQCFGLLKYAMTLDGKSAAATGHSRWISNSPARQWVH 182
Query: 256 E----YDAIILSASSTKKYSIPAS---QEPDANQPFRII-TVSNHASPIRIPGLSEESSS 307
+ +DA+I+ + + + + + E +QP R++ + S + P+ EE+ +
Sbjct: 183 QQRAWHDAVIVGSRTVWQDNPRLTCRLAELQGSQPLRVVLSRSLNLPPVAHLWQVEEAPT 242
Query: 308 KVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
VI + + +G+E ++L Q+ + G S L + G
Sbjct: 243 LVITEAVATHPLWGSLAKQGVELLHLPQVTPSRAAQVLFQRGCLSALWECGGTLA--WAA 300
Query: 368 LKEGIEQNLLQKIVVEVL 385
LK+G Q + I ++L
Sbjct: 301 LKDGAIQKVAAFIAPKIL 318
>gi|95929567|ref|ZP_01312309.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans
DSM 684]
gi|95134264|gb|EAT15921.1| riboflavin biosynthesis protein RibD [Desulfuromonas acetoxidans
DSM 684]
Length = 364
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 203/362 (56%), Gaps = 23/362 (6%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ ++LA KA+G T+PNP VG VIV+DG++VG GFHPKAG+PHAEVFALRDA + A GA
Sbjct: 1 MQIALDLARKALGRTTPNPPVGAVIVRDGQVVGRGFHPKAGEPHAEVFALRDAADQARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
AYV+LEPC+H+GRTPPC EALI A V +V VG++DPNP V+ +G+ERLR AG++V VGV
Sbjct: 61 DAYVTLEPCSHHGRTPPCCEALIAAGVSRVFVGLIDPNPQVSGQGVERLRAAGVEVEVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQE 256
+ C+RL FI +++G+P L+ L+++G + G A S + +L +
Sbjct: 121 LETQCRRLIAPFIKHMISGRPLFILKSALTLDGRTATRTGHSQWITSARSREHVHRLRDQ 180
Query: 257 YDAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
DAI++ + + + + + P + P RI+ S P ++ +S+S V T
Sbjct: 181 VDAIMVGSGTALRDNPRLTTRLTPPGHDPIRIVVDSRLQLPETSHLINHQSASPTWVVTV 240
Query: 315 GE--------ITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
+ + V + + + Q++L A+ D SVLV+ G +
Sbjct: 241 AQADPAKIKALQVHAGVEVMTVAATSAGQVDLPALADMLGQRDIQSVLVE--GGSVLNQS 298
Query: 367 LLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHT--LLNSLGKRLILKNLQPKMSSQSIVL 423
L G L+ +++V + P + G+DG T ++ L L L++ + ++L
Sbjct: 299 LFSAG----LIDRVMVYMAPKLLGGNDGFGLFTGQGVDHLDDALQLRDFRVTCLGDDVLL 354
Query: 424 EG 425
EG
Sbjct: 355 EG 356
>gi|354557522|ref|ZP_08976780.1| riboflavin biosynthesis protein RibD [Desulfitobacterium
metallireducens DSM 15288]
gi|353550316|gb|EHC19753.1| riboflavin biosynthesis protein RibD [Desulfitobacterium
metallireducens DSM 15288]
Length = 376
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 158/249 (63%), Gaps = 5/249 (2%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
+ N + +D YMRR ++LA +A+G TSPNP+VGCVIVK+ +I+GEGFH KAG PHAEV A
Sbjct: 4 IPNFNANDENYMRRALQLAAQAIGKTSPNPLVGCVIVKNNEIIGEGFHHKAGTPHAEVHA 63
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
LR AGE + ATAYVSLEPC+H+GRTPPC +AL+K+ + +VV+ M DPNP V+ +G+ RL
Sbjct: 64 LRQAGEKTKDATAYVSLEPCSHFGRTPPCADALVKSGIHRVVIAMQDPNPHVSGEGINRL 123
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAES 246
R+AGI V VG+ ++LN+ F+ I TG P+ + +++G + + G+ +ES
Sbjct: 124 REAGIQVEVGLCAAEAEKLNQPFLKAIQTGLPYLVYKVASTLDGKIATETGDSRWISSES 183
Query: 247 GGYYSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEE 304
Y+ L+ +IL S T PA + P+ P R+I + P+ LS
Sbjct: 184 SRLYAHELRNQLDVILVGSETVVKDDPALTCRLPEGRDPVRVIVDGSLKIPLEAQVLSPL 243
Query: 305 SSSKVIVFT 313
SS+ I+ T
Sbjct: 244 SSATCIIAT 252
>gi|443476963|ref|ZP_21066841.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudanabaena biceps PCC 7429]
gi|443017987|gb|ELS32319.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudanabaena biceps PCC 7429]
Length = 371
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 185/318 (58%), Gaps = 18/318 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA---GEL 136
+M+RC++LA +A G T+PNPMVG VIVK+G+++GEGFHP+AGQPHAEVFA+R A GE
Sbjct: 16 WMQRCIDLALQARGRTAPNPMVGSVIVKNGRVLGEGFHPQAGQPHAEVFAIRAAQQTGED 75
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ AT YV+LEPCNH+GRTPPC+EA+I+A + +VV+G +DP+P V G +RLR AG+ V
Sbjct: 76 LQDATLYVNLEPCNHHGRTPPCSEAIIQAGIGEVVIGAIDPDPRVAGTGRDRLRAAGLKV 135
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
T GV E C LNEAF HR+ T PF +Y ++++G + G +G +++ +
Sbjct: 136 TTGVLVEACLELNEAFFHRVRTNLPFGIFKYAMTLDGKIATTSGHSYWITGAEARRVVHD 195
Query: 257 Y----DAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASP--IRIPGLSEESSSK 308
DAII + +T + P + + P R++ ++ P + ++E +
Sbjct: 196 LRGGCDAII-TGGNTVRLDNPHLTTHGTSLHCPLRVVVSASCDLPETANLWHITESEKTL 254
Query: 309 VIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
+IV D ++ + + +E + L L+ + V+ G +VL + G G
Sbjct: 255 LIVPPDRHPQLKQKLRDRQVEVLELDILSPEVVMQELGKRGCNTVLWECGGRLG------ 308
Query: 369 KEGIEQNLLQKIVVEVLP 386
I+ ++QKI + P
Sbjct: 309 AAAIKAKMVQKIYAFIAP 326
>gi|404496485|ref|YP_006720591.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Geobacter metallireducens GS-15]
gi|418064787|ref|ZP_12702163.1| riboflavin biosynthesis protein RibD [Geobacter metallireducens
RCH3]
gi|78194088|gb|ABB31855.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Geobacter metallireducens GS-15]
gi|373563060|gb|EHP89261.1| riboflavin biosynthesis protein RibD [Geobacter metallireducens
RCH3]
Length = 370
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 182/320 (56%), Gaps = 24/320 (7%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+R + LA + G TSPNP VGCVIV+DG IVGEG+H KAG PHAEV ALR AGELA GA
Sbjct: 9 MKRALALARRGKGKTSPNPAVGCVIVRDGAIVGEGWHRKAGTPHAEVHALRQAGELARGA 68
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
YV+LEPC+H+G+TPPC +AL++A V +V VGM+DPNP V+ +G+ERLR AGI+V G+
Sbjct: 69 DVYVTLEPCSHFGKTPPCADALVEAGVGRVFVGMVDPNPKVSGRGIERLRVAGIEVVTGI 128
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQLLQE 256
+ C+RLNE F+ + TG PF L+ ++++G G+ +S Y +L
Sbjct: 129 REAECRRLNEPFVKHVTTGLPFVILKSAMTMDGKTATASGDSRWITNEKSRRYVHKLRSM 188
Query: 257 YDAIILSASSTKKYSIP-ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDG 315
DAI++ + ++ P P R++ S+ P L +ES + +V T
Sbjct: 189 VDAIMVGVGTVLADDPQLTARIPRGKDPVRVVVDSSLRIPSGARMLHQESPATTVVATVS 248
Query: 316 E-----ITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
E + +E + G E + H +++L+ +L + G S+L++ G E
Sbjct: 249 EDRNRIVKLE----SAGAEVLRCHAVMGRIDLRDLLARLGARGVQSILLE-----GGSE- 298
Query: 367 LLKEGIEQNLLQKIVVEVLP 386
L E + L+ K V+ P
Sbjct: 299 LAGEALRAGLIDKCVLFYAP 318
>gi|182417348|ref|ZP_02948682.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521]
gi|237668576|ref|ZP_04528560.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378778|gb|EDT76300.1| riboflavin biosynthesis protein RibD [Clostridium butyricum 5521]
gi|237656924|gb|EEP54480.1| riboflavin biosynthesis protein RibD [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 360
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 203/364 (55%), Gaps = 18/364 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM+R +ELA K VG +PNPMVG VIVKD K++GEGFH K G HAE A+++A E
Sbjct: 2 DEFYMKRALELAIKGVGMVNPNPMVGAVIVKDNKVIGEGFHEKYGHAHAERNAVKNAVED 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC + LI+ KV+KVV+GMLDPNP+V K +++L++ I+V
Sbjct: 62 IEGATVYVTLEPCAHYGKTPPCVDLLIEKKVRKVVIGMLDPNPLVAGKSIKKLKENNIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
VGV+++ C++LNE FI I T KPF ++ +S++G + GE +E +S
Sbjct: 122 KVGVKEKECRKLNEVFIKYITTKKPFVIMKAGISIDGKIATSGGESKWITSERSRLHSHE 181
Query: 254 LQEYDAIILSASSTKKYSIPA---SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L+ + I+ +T P+ E P RII S P + +++ ++
Sbjct: 182 LRNRMSGIMVGINTVLSDDPSLTYRGEHKGKDPLRIIIDSTLKVPFESKVIKYNNNNTIV 241
Query: 311 VFTDGEITVEPD----MGTKGIETVNLH-QLNLKAVLDYCYSHGFCSVLVDLRG--NYGD 363
+ ++ + MG K IET + +++L+ V++ S+L++ G N+
Sbjct: 242 ACVENADLIKKEKLEKMGVKVIETKSKKGKVDLQEVVERLGKDKIDSILLEGGGTLNFS- 300
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVL 423
LKEGI + I +++ N + + N L + LK++ + IV+
Sbjct: 301 ---ALKEGIVDKVRFYIAPKIIGGQNSKNSVSGQGFYN-LDDCVNLKDMSYEQMGNEIVV 356
Query: 424 EGYL 427
EGY+
Sbjct: 357 EGYI 360
>gi|222055764|ref|YP_002538126.1| riboflavin biosynthesis protein RibD [Geobacter daltonii FRC-32]
gi|221565053|gb|ACM21025.1| riboflavin biosynthesis protein RibD [Geobacter daltonii FRC-32]
Length = 368
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/239 (46%), Positives = 148/239 (61%), Gaps = 5/239 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
M+R V LA K VG T+PNP VGCVIVKDG IVGEG+H KAG PHAE+ ALR AG LAEG
Sbjct: 8 MMKRAVSLARKGVGKTAPNPAVGCVIVKDGAIVGEGWHRKAGTPHAEIHALRQAGALAEG 67
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A +V+LEPC+H+G+TPPC +ALI AKV +V VGM+DPNP V KG+ +LR AGI V
Sbjct: 68 ADVFVTLEPCSHFGKTPPCADALIAAKVARVYVGMVDPNPRVCGKGISKLRAAGIQVEAP 127
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV----LDQLGEGVAESGGYYSQLLQ 255
+ +E C+ LNE FI + TG PF L+ ++++G + +D +S Y +L
Sbjct: 128 LLEEKCRALNEPFIKHVTTGLPFVILKTAMTMDGKIATAGMDSKWVTSEKSRRYVHKLRS 187
Query: 256 EYDAIILSASS-TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
E D I++ + K + S+ P P R++ S P L +S++K +V T
Sbjct: 188 ELDVIMVGVGTIIKDDPLLTSRIPGGRNPLRVVVDSKLRIPPDAHVLHCDSTAKTVVAT 246
>gi|229513912|ref|ZP_04403374.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TMA 21]
gi|229349093|gb|EEO14050.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TMA 21]
Length = 367
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 178/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEEDARALNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + Y +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + + G +L+L+ +L H +LV+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAENG----------KLDLRELLAQLAQQHNVNQLLVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|333978683|ref|YP_004516628.1| riboflavin biosynthesis protein RibD [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333822164|gb|AEG14827.1| riboflavin biosynthesis protein RibD [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 391
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 30/315 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM+ ++LA +A+G TSPNPMVG V+VKDG+++G G+H +AG PHAE+ AL +AGE
Sbjct: 25 DEYYMQMALDLARRALGRTSPNPMVGAVLVKDGQVIGRGYHARAGTPHAEIHALNEAGEQ 84
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H GRT PCTEA++ A VK+VV M DPNP+V +GLERLR AG++V
Sbjct: 85 AAGATLYVTLEPCCHRGRTGPCTEAILDAGVKRVVAAMTDPNPLVAGRGLERLRQAGVEV 144
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS----Q 252
TVGV +E ++LNE F+ I T +PF L+ +S++G + + GE +G +
Sbjct: 145 TVGVMEEEARKLNEVFVKYITTRRPFVVLKAAMSLDGKIATRTGESRWITGPRARLAVHR 204
Query: 253 LLQEYDAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
L YDAI++ ++ K + S E + P RII S +P ++++S +
Sbjct: 205 LRDRYDAILVGVNTVLKDNPSLTTRISGE-NGKDPVRIIVDSLARTPPDARVITQQSPAP 263
Query: 309 VIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
IV V+ NL +L G ++V G DLE+L+
Sbjct: 264 TIVAVTERAPVQ-----------NLRRLE---------EAGAQVLVVPGPGLRVDLEVLM 303
Query: 369 KEGIEQNLLQKIVVE 383
KE + + + ++VE
Sbjct: 304 KE-LARREITSVLVE 317
>gi|258627340|ref|ZP_05722124.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM603]
gi|258580378|gb|EEW05343.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM603]
Length = 367
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 178/335 (53%), Gaps = 33/335 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P S E D QPFR+I H +
Sbjct: 188 FRAQASTILSTSQTVLADNASLAVRWHDLPQSVQAQYAETDLRQPFRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
SS + + ++ + + G ++LH+L + H V V+
Sbjct: 248 ALYQTSSSVLRVASENADLCISAENG-----KLDLHEL----LAQLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
G L + IEQ L+ +I++ + P GSDG
Sbjct: 299 GQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|134299939|ref|YP_001113435.1| riboflavin biosynthesis protein RibD [Desulfotomaculum reducens
MI-1]
gi|134052639|gb|ABO50610.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfotomaculum reducens MI-1]
Length = 376
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/251 (47%), Positives = 152/251 (60%), Gaps = 7/251 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA KA G TSPNPMVG V+VKDG++VG+GFH KAG HAEV AL DAG+
Sbjct: 4 DRHYMNMALELAAKARGRTSPNPMVGAVLVKDGEVVGKGFHAKAGGAHAEVVALADAGDR 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC H+G+T PCTEAL KA VK+VV M DPNP+V KGL L+DAGI+V
Sbjct: 64 AKGATVYVTLEPCCHHGKTGPCTEALKKAGVKRVVAAMTDPNPLVAGKGLNILKDAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
G+ +E K LNE FI I T PF L+ S++G + GE +G Y +
Sbjct: 124 VSGLLEEEAKELNEVFIKYITTKIPFIVLKAATSLDGKIATASGESKWITGDTARNYGHR 183
Query: 253 LLQEYDAIILSASS--TKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L YDAI++ ++ S+ A E P RII S +P L++ES++
Sbjct: 184 LRDAYDAILVGVNTVLADDPSLTARLPEGRGKDPLRIIVDSMSRTPTSAKILTQESAAHT 243
Query: 310 IVFTDGEITVE 320
I+ T VE
Sbjct: 244 IIATTQAAPVE 254
>gi|302392186|ref|YP_003828006.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acetohalobium arabaticum DSM 5501]
gi|302204263|gb|ADL12941.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
;5-amino-6-(5-phosphoribosylamino)uracil reductase
[Acetohalobium arabaticum DSM 5501]
Length = 371
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 154/250 (61%), Gaps = 16/250 (6%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N D D YMR ++LA K G TSPNPMVG VIVKDG+IVG+G+H AG+PHAEV AL+
Sbjct: 5 NRDID---YMRLALDLAAKGRGRTSPNPMVGAVIVKDGEIVGQGYHHAAGKPHAEVNALQ 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
DA + E AT YV+LEPC+HYG+TPPCT+ALI A V +VV M DPNP V +GL++L D
Sbjct: 62 DAADKTEDATVYVTLEPCSHYGKTPPCTKALIGAGVSRVVAAMKDPNPKVAGRGLQKLAD 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESG 247
AGI+V G+ +E K LNEAFI I T +PF L+ ++++G + + G+ ES
Sbjct: 122 AGIEVESGLLEEEAKELNEAFIKYITTERPFVILKNAMTLDGKIATKTGDSKWISGEESR 181
Query: 248 GYYSQLLQEYDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGL 301
Y +L E D I +LS + +P E D P RI+ S P+ +
Sbjct: 182 RYVHRLRDEVDGILVGIGTVLSDNPRLTTRLP---EQDGQDPIRIVLDSRLEIPLDSNLV 238
Query: 302 SEESSSKVIV 311
++ES +K +V
Sbjct: 239 TQESEAKTVV 248
>gi|226951731|ref|ZP_03822195.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244]
gi|226837521|gb|EEH69904.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. ATCC 27244]
Length = 366
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 127/182 (69%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
++M+R ++LA ST PNP VGCVIVKDGKI+GEGFHPKAGQPHAEVFALR AGE A+
Sbjct: 14 YWMQRAIDLARLGQYSTKPNPNVGCVIVKDGKILGEGFHPKAGQPHAEVFALRQAGENAK 73
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
ATAYV+LEPC HYGRTPPC EAL+KA+VKKVV+ DPNP+V KG++ L DAGI+V
Sbjct: 74 DATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGKGVKILLDAGIEVET 133
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYD 258
GV E+ K LN F+ + G P+ L+ S++G GE +G Q +Q +
Sbjct: 134 GVCTEIAKGLNLGFLKAMSAGLPYVRLKVASSLDGRTAMASGESKWITGAIARQDVQHWR 193
Query: 259 AI 260
AI
Sbjct: 194 AI 195
>gi|403384160|ref|ZP_10926217.1| riboflavin biosynthesis protein ribD [Kurthia sp. JC30]
Length = 366
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 183/324 (56%), Gaps = 18/324 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K+D +YM+ ++LA+ A G+T+PNPMVG VIV +G IVG G H KAG+PHAEV A R AG
Sbjct: 3 KNDAYYMQLALDLASSARGNTNPNPMVGAVIVNNGVIVGTGLHRKAGEPHAEVHAFRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC + ++ VK+VVV M DPNP V +G++ LRDAGI
Sbjct: 63 EHAKGATLYVTLEPCSHYGKTPPCANLVKESGVKRVVVAMKDPNPSVAGRGIQLLRDAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+V VGV + LNE FIH ++T +PF +Y ++ +G + G+ A+
Sbjct: 123 EVEVGVLEAEAYTLNERFIHNMLTERPFVVAKYAMTADGKIATSTGDSRWITADDAREDV 182
Query: 252 QLLQ-EYDAIILSASSTKKYSIPASQE---PDANQPFRIITVSNHASPIRIP-GLSEESS 306
L + E D I++ + + + + P RI+ SN +P+ + E+
Sbjct: 183 HLYRHEMDGILVGIGTVLADNPSLTTRLLTKEGKNPVRIVLDSNLQTPLSANVAQTTEAR 242
Query: 307 SKVIVFTDGEITVEPDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGNYG 362
+ +I D E + E + +G+E + + + L+L A L Y G +LV+ G G
Sbjct: 243 TMIITAKDAEESREQALVAQGVEVIRVARQADGLDLDAALQALYQAGVTDILVE--GGAG 300
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLP 386
+ Q L+QK ++ + P
Sbjct: 301 VHASFFR----QQLVQKAIIYMAP 320
>gi|86605105|ref|YP_473868.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-3-3Ab]
gi|86553647|gb|ABC98605.1| riboflavin biosynthesis protein RibD [Synechococcus sp. JA-3-3Ab]
Length = 371
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 183/333 (54%), Gaps = 15/333 (4%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
N D +M RC+ LA SPNP V CVIV+ ++VGEG H AGQPHAEV AL+
Sbjct: 2 NLDADRQWMERCLSLARSTPQRPSPNPRVACVIVRGDQVVGEGVHLGAGQPHAEVLALQQ 61
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AG LA+GAT YV+LEPCNHYGRTPPCTEA++ A +++VVVGM DPNP+V KG+ RL++A
Sbjct: 62 AGSLAKGATLYVNLEPCNHYGRTPPCTEAILAAGIRRVVVGMQDPNPLVAGKGIRRLQEA 121
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ 252
G++VTVGV ++ C+ LNE F IV + F L+Y ++++G G S +
Sbjct: 122 GVEVTVGVLEQECQELNEGFAFAIVQKRCFGLLKYAMTLDGKSAAATGHSRWISNPLARE 181
Query: 253 LLQE----YDAIILSASSTKKYSIP--ASQEPD--ANQPFRII-TVSNHASPIRIPGLSE 303
+ +DA+I+ S T + P + PD +QP R++ + S + P+ +E
Sbjct: 182 WVHRQRAWHDAVIV-GSGTVWHDNPHLTCRLPDFHGSQPLRVVLSRSLNLPPLAHLWRAE 240
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
E+ + VI + + +G+E ++L Q+ + G S L + G
Sbjct: 241 EAPTLVITEATEAHPLWGSLAKQGVELLHLDQVTPAQAAQVLFERGCLSALWECGGTLA- 299
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNP 396
LK+G Q + I ++L G+D P
Sbjct: 300 -WAALKDGAIQKVAAFIAPKIL---GGADAPTP 328
>gi|205374673|ref|ZP_03227467.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
[Bacillus coahuilensis m4-4]
Length = 377
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 198/376 (52%), Gaps = 34/376 (9%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
NN++ FYM ++ A G TSPNP+VG VIV+DG+IVG G H KAG+PHAE+ ALR
Sbjct: 2 NNNQSHEFYMNMAIQNAKVMSGQTSPNPLVGAVIVRDGEIVGFGAHMKAGEPHAEIHALR 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AG+ A+GAT YV+LEPC+HYGRT PC ALI+A + VVV LDPNPIV G+ L D
Sbjct: 62 MAGDKAKGATIYVTLEPCSHYGRTGPCAVALIEAGITNVVVATLDPNPIVAGNGVRILED 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLG-------EGVA 244
AGI V GV + KR+NE F H IVTG+PF TL+ S++G + EG
Sbjct: 122 AGIKVITGVMEAEAKRMNEVFNHFIVTGRPFITLKTASSLDGKIATHTHNSKWITCEGAR 181
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGL 301
E ++ YDAI++ A++ + + + + P RII S P+ L
Sbjct: 182 ED---VHKMRNVYDAILVGANTILEDNPSLTTRLENTHGKNPIRIIIDSALKIPLNSKVL 238
Query: 302 SEESSSKVIVFTDGEI------TVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLV 355
+++ + I FT + +VE +G I+T HQ+NL V++Y S+++
Sbjct: 239 TDKEAPTWI-FTSKMVEETRVQSVE-RLGASVIKTSGTHQVNLHDVVNYLGKMNVSSLII 296
Query: 356 DLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LK 410
+ G +E+ L+QK V+ P G G T L G ++ L+
Sbjct: 297 EGGGTINS------SFVEEKLVQKAVIYFAPKLIG--GKEAPTFLEGKGVAIVSQAIDLE 348
Query: 411 NLQPKMSSQSIVLEGY 426
N+ + +EGY
Sbjct: 349 NMTITSLGKDFKIEGY 364
>gi|342214443|ref|ZP_08707138.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
780 str. F0422]
gi|341593544|gb|EGS36380.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
780 str. F0422]
Length = 379
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 173/296 (58%), Gaps = 19/296 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM + +ELA KA G TSPNPMVG +IVKDG+I+GEG+H KAG+PHAEV+AL AG
Sbjct: 7 DEKYMAKAIELAEKARGCTSPNPMVGALIVKDGRIIGEGYHQKAGEPHAEVYALHQAGMD 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+HYG+TPPC + +I A + +VV+GM+DPNP+V KGL L++AGI+V
Sbjct: 67 ARGATLYVTLEPCSHYGKTPPCAKRVIAAGISRVVIGMIDPNPLVAGKGLAMLQEAGIEV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV------AESGGYY 250
+GV + C +NEAFI I TGKPF L+ +S++G + GE A G+
Sbjct: 127 EIGVLERQCVEMNEAFITYIKTGKPFVILKSAMSIDGKIATASGESKWITNEEARLDGH- 185
Query: 251 SQLLQEYDAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
++ +E DA+++ + S QE NQP I S +P+ + +
Sbjct: 186 -RIRKEVDAMLVGVGTIIADDPLLSCRLPQETVENQPHLYILDSQGRTPLDAT-IWTVPN 243
Query: 307 SKVIVFTDGEITVEP--DMGTKGIETV----NLHQLNLKAVLDYCYSHGFCSVLVD 356
+ +F E +E D KG E + N L++ +L+ + S+L++
Sbjct: 244 RNITIFVGEECGLEQMGDFSDKGAEVIVTPSNERGLDISFILEELGARQCMSLLIE 299
>gi|15605717|ref|NP_213094.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
gi|6225948|sp|O66534.1|RIBD_AQUAE RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
gi|2982867|gb|AAC06487.1| riboflavin specific deaminase [Aquifex aeolicus VF5]
Length = 356
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ + LA K G T PNP VG V+VK+GKIVG G+H KAG+PHAEV AL AGE
Sbjct: 6 DKNYMKLALSLAKKRKGYTHPNPTVGAVVVKEGKIVGLGYHEKAGKPHAEVMALGQAGEK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC H+GRTPPCT+A+I++ +K+VVV LDPNP+++ KG+E+LR+AGI+V
Sbjct: 66 AKGATLYVTLEPCTHFGRTPPCTDAIIRSGIKRVVVATLDPNPLMSGKGVEKLRNAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQ 252
VGV +E + LNE F I +P+ TL++ +++G + G ES
Sbjct: 126 DVGVCEEEARELNEDFFTYITQERPYITLKWAQTLDGKLATLTGSSKWITSKESRKVAHI 185
Query: 253 LLQEYDAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L +E A+++ ++ K + P QP RII P+ L+ E + I
Sbjct: 186 LRREATAVLVGVNTVIKDDPHLTVRFVPTEKQPVRIILDPELEVPLSAKVLNTEEAP-TI 244
Query: 311 VFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
V T E + KG++ + L NLK +L ++V+ G L LKE
Sbjct: 245 VITKKENEKAEKLKEKGVQVLILKGFNLKNILKKLKELEIMHLMVE--GGPRTLTSFLKE 302
Query: 371 GIEQNLLQKIVVEVLP 386
G +IVV + P
Sbjct: 303 G----FFDRIVVFIAP 314
>gi|428216403|ref|YP_007100868.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudanabaena sp. PCC 7367]
gi|427988185|gb|AFY68440.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudanabaena sp. PCC 7367]
Length = 378
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 201/380 (52%), Gaps = 32/380 (8%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
N + D +M+ C+ELA KA G T+PNP+VG VIVK G +G GFHPKAGQPHAE A+ +
Sbjct: 2 NHRQDLDWMQYCLELAAKAKGQTAPNPLVGSVIVKQGNRLGAGFHPKAGQPHAEALAIAE 61
Query: 133 A----GELA-EGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLE 187
A G+ A EGAT YV+LEPCNH+GRTPPCTEA+IKA +K+VVVGM+DP+ V+ G +
Sbjct: 62 ARAKYGKAAIEGATLYVNLEPCNHHGRTPPCTEAIIKAGIKRVVVGMIDPDLRVSGTGCD 121
Query: 188 RLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VA 244
RLR AGI+V G+ + C+RLNE F+HR+ P +Y ++++G + G
Sbjct: 122 RLRQAGIEVITGIAEAACQRLNEGFVHRVRHQTPLGIFKYAMTLDGKIATAAGHSFWITG 181
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASP----IRI 298
E+ LL+ +++ +T + P + + P R++ + P +
Sbjct: 182 EAARREVHLLRASCDAVITGGNTVRLDNPLLTTHNLTTHNPLRVVLSRSLDLPRDAKLWQ 241
Query: 299 PGLSEESSSK-------VIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFC 351
G S+ +K VI ++ + +G+E + L +L ++AV+ S G
Sbjct: 242 VGNSDRGDNKGQNHPTLVITQPHANPELQSYLCDRGVEILTLPELTIQAVIQELGSRGMN 301
Query: 352 SVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL----LNSLGKRL 407
VL + GN L E I +QK+ + P G D P + L + + L
Sbjct: 302 QVLWECGGN------LAAEAIAAGAVQKVYAFIAPKLIG-DFAAPSPIADLGLRQMSQAL 354
Query: 408 ILKNLQPKMSSQSIVLEGYL 427
L+ + + + ++ GYL
Sbjct: 355 DLRQTELRQIDRDWLITGYL 374
>gi|431793868|ref|YP_007220773.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784094|gb|AGA69377.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 365
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 185/338 (54%), Gaps = 19/338 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R ++LA +AVG TSPNP+VGCVIV +G+IVGEG+H KAG PHAEV AL A
Sbjct: 2 EQDQIYMSRALQLAAQAVGRTSPNPLVGCVIVNNGRIVGEGYHQKAGTPHAEVHALCAAD 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
A+GATAYV+LEPC+H+G+TPPC +ALI+A +K+VVV M DPNP+V +G+ RLRDAGI
Sbjct: 62 TNAQGATAYVTLEPCSHFGKTPPCADALIEAGIKRVVVAMQDPNPLVGGRGISRLRDAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
V VG++++ + LN+ F+ I PF + L+++G + + G+ S Y
Sbjct: 122 QVDVGLKEDEARSLNKGFLKAIQAELPFVLYKSALTLDGKIATESGDSKWITNEVSRAYV 181
Query: 251 SQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
QL ++D +I+ S T + PA + + P R+I P + S+
Sbjct: 182 HQLRNQFD-VIMVGSETVNHDNPALNCRMSEGRDPIRLIVDGELKIPHNADVFTSSCSAP 240
Query: 309 VIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDY------CYSHGFCSVLVDLRGNYG 362
I+ T +E +G++ V + + N + Y G+ S+L++ G
Sbjct: 241 CIIATTEAAPLEQYAFFQGLDNVEVWKYNTSRYVPYEDLFRDIVKRGWNSILLEGGGK-- 298
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLL 400
L ++ L+ +I P G G +P T L
Sbjct: 299 ----LAGSLLQAQLIDEIEFIYAPKLIGGKGPSPLTGL 332
>gi|83589766|ref|YP_429775.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Moorella thermoacetica ATCC 39073]
gi|83572680|gb|ABC19232.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Moorella
thermoacetica ATCC 39073]
Length = 376
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 196/373 (52%), Gaps = 34/373 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA + +G TSPNP VG VIV+DG++VGEG+H KAG PHAE+ ALR AGE
Sbjct: 5 DAIFMARALELARQGLGRTSPNPTVGAVIVRDGQVVGEGYHQKAGTPHAEIHALRAAGEK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC HYGRTPPCTEA+I A +K+VV M DPNP V G L AGI+V
Sbjct: 65 ARGATLYVTLEPCCHYGRTPPCTEAIIAAGIKRVVAAMADPNPRVAGGGFRALSQAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +RLNEAFI I TG+P+ TL+ L+++G + + G +G Q E
Sbjct: 125 ETGLLADEARRLNEAFIKYITTGRPWVTLKMALTLDGKIATRTGAARWITGPAARQRAHE 184
Query: 257 ----YDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPI--RIPGLSEE 304
+DAI +L+ +P + DA R+I S+ P+ R+ L E
Sbjct: 185 LRDIHDAILVGIGTVLADDPELTTRLPDGRGRDA---IRVILDSHLRLPLSARVVNLQSE 241
Query: 305 SSSKVIVFTDGEITVEPDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGN 360
+ + V+ ++ +G+E + L + + + +L S+LV+
Sbjct: 242 APTLVVTTPSAPAAARENLAARGVEVLVLPEEDGRVAWQPLLAELARRQVTSILVE---- 297
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLLNSLG-----KRLILKNLQP 414
G E+ + ++ K+V + P ++ G + P + LG L+ L
Sbjct: 298 -GGAEV-NATALAAGIVDKVVAFIAPKIFGGREAPAP---VGGLGVADPATAWKLEKLAV 352
Query: 415 KMSSQSIVLEGYL 427
+ + I+L GYL
Sbjct: 353 ERCGEDIMLSGYL 365
>gi|343497592|ref|ZP_08735655.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
nigripulchritudo ATCC 27043]
gi|342817784|gb|EGU52660.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
nigripulchritudo ATCC 27043]
Length = 365
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 180/347 (51%), Gaps = 58/347 (16%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + +TSPNP VGCVI KDGKIVGEG H KAG+PHAEV ALR AGE
Sbjct: 7 DHQMMARAIALAKRGRFTTSPNPNVGCVIAKDGKIVGEGLHFKAGEPHAEVHALRAAGEN 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC+EALIKA V +VV M DPNP+V +G++ LRDAG++V
Sbjct: 67 AKGATAYVTLEPCSHYGRTPPCSEALIKAGVARVVCAMQDPNPVVAGRGVKMLRDAGVEV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VGV + + LN+ F+ R+ TGKPF L+ S++G GE + Q +Q
Sbjct: 127 EVGVLESDARALNKGFLKRMETGKPFVQLKLAASLDGQTALSNGESKWITSPQARQDVQA 186
Query: 257 YDA---IILSASST----------KKYSIPASQ-----EPDANQPFRII-----TVSNHA 293
Y A I+S S T + +P S E + QP R+I + +
Sbjct: 187 YRAQSCAIVSTSKTVIDDNASLNVRWSELPESTQVIYPESELRQPARVILDRQQKLHQNL 246
Query: 294 SPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSV 353
S + PG E K F QLN +D Y V
Sbjct: 247 SLFQTPGNIEVVDPKSPYF----------------------QLNSAGQVDIPY------V 278
Query: 354 LVDLRGNYGDLEMLLKEG-------IEQNLLQKIVVEVLPVWNGSDG 393
L G + ++ G IEQ+L+ +++V + P GSDG
Sbjct: 279 FDKLAEKLGIQHIWVEAGATLAASLIEQDLMDELIVYLAPKLMGSDG 325
>gi|169830807|ref|YP_001716789.1| riboflavin biosynthesis protein RibD [Candidatus Desulforudis
audaxviator MP104C]
gi|169637651|gb|ACA59157.1| riboflavin biosynthesis protein RibD [Candidatus Desulforudis
audaxviator MP104C]
Length = 372
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 171/291 (58%), Gaps = 11/291 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR ++LA +A G TSPNP+VG V+V+DG+IVG G+H +AG PHAE+ AL AGE
Sbjct: 2 DQEYMRMALDLAVRARGRTSPNPLVGAVVVRDGEIVGRGYHARAGLPHAEIVALAQAGEA 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A G+T YVSLEPC H+GRT PCTEA+I A V++VV M DPNP V +G+ RLR+AG++V
Sbjct: 62 ARGSTLYVSLEPCCHFGRTGPCTEAVIAAGVRRVVTAMRDPNPKVAGRGIARLREAGVEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
T V + RLNE FI I TG+PF L+ +S++G + + G+ +GG Y +
Sbjct: 122 TEDVLRDEAARLNEIFIKYITTGRPFVALKVAVSLDGKIATRTGDSRWITGGPAREYAHR 181
Query: 253 LLQEYDAIILSASSTKKY--SIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L YDA+++ + K S+ P RI+ S P LS ES++ VI
Sbjct: 182 LRDTYDALLVGRGTVVKDDPSLTTRLPGGGRDPVRIVLDSLARIPESSRVLSGESTAPVI 241
Query: 311 VFTDGEI--TVEPDMGTKGIETVNLH---QLNLKAVLDYCYSHGFCSVLVD 356
V G+ T + ++G++ V ++L+ +L + SV+V+
Sbjct: 242 VAVTGQAPRTRVAGLESRGVQVVRCGPGPAVDLEVLLRELAAREITSVMVE 292
>gi|315634417|ref|ZP_07889704.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC
33393]
gi|315477007|gb|EFU67752.1| riboflavin biosynthesis protein RibD [Aggregatibacter segnis ATCC
33393]
Length = 374
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 168/304 (55%), Gaps = 39/304 (12%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VKDG++VG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DAAFMQLALDLAKQGEFTTTPNPSVGCVLVKDGEVVGKGFHAKAGEPHAEVMALREAGEK 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L++A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILSDAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEENAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARADVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA----------------SQEPDANQPFRIITVSNHA---- 293
Y A ILS S T P+ +QE QP R+I S+H
Sbjct: 189 YRAKASAILSTSQTVLADDPSLNVRWEELPLDVKASYAQE-KLRQPVRVILDSSHKVRSD 247
Query: 294 -------SPIRIPGLSEESSSKVIVFTD--------GEITVEPDMGTKGIETVNLHQLNL 338
SP+ + G + S + FTD GE ++ M G +N +
Sbjct: 248 FKVFSTESPVWLVGEEDYSLTDFPPFTDYLKLDRNQGETRLQSLMAELGKRQINTLWVEA 307
Query: 339 KAVL 342
A L
Sbjct: 308 GATL 311
>gi|312898694|ref|ZP_07758084.1| riboflavin biosynthesis protein RibD [Megasphaera micronuciformis
F0359]
gi|310620613|gb|EFQ04183.1| riboflavin biosynthesis protein RibD [Megasphaera micronuciformis
F0359]
Length = 371
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 173/296 (58%), Gaps = 24/296 (8%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M + LA +G TSPNP VGCVIVKDG+IVG G+H +AG PHAEV+ALR+A E A+GA
Sbjct: 1 MEEALNLARMGLGYTSPNPTVGCVIVKDGEIVGRGYHHQAGTPHAEVWALREAKEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC HYG+TPPC AL+KA V KVV MLDPNP+V KG LR+AGI V VG+
Sbjct: 61 TVYVTLEPCAHYGKTPPCARALVKAGVAKVVCAMLDPNPLVAGKGAAILRNAGIPVIVGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG------VAESGGYYSQLL 254
+ ++NE FI ++ KPF ++ S++G + G+ A G+Y + L
Sbjct: 121 MSKEAVKMNEVFIKNMIVHKPFIAVKLAQSLDGCTASRTGKSKWITNDTARQEGHYLRSL 180
Query: 255 QEYDAIILSASS--------TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
YDAI++ ++ T + + P + P QP RII S ++ ++++ S
Sbjct: 181 --YDAILVGINTVESDNPLLTSRTTRPGHERP--KQPTRIILDSTGRIDLQALLVTDKQS 236
Query: 307 SKVIVFTDG-EITVEPDMGTKGIETV-----NLHQLNLKAVLDYCYSHGFCSVLVD 356
+IV T+ + + T G+E + + +++L ++D Y G CS+L++
Sbjct: 237 PTIIVTTERCPESKRQALNTAGVEVIVAAADDEGRIDLNGLMDTLYKKGICSILIE 292
>gi|333370642|ref|ZP_08462633.1| riboflavin biosynthesis protein RibD [Desmospora sp. 8437]
gi|332977386|gb|EGK14164.1| riboflavin biosynthesis protein RibD [Desmospora sp. 8437]
Length = 368
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 197/368 (53%), Gaps = 23/368 (6%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
N +D +M + LA A G TSPNP+VG V+VKDG+++G G H KAG PHAEV AL
Sbjct: 4 NLTEDERWMELALRLAEAARGQTSPNPLVGAVVVKDGQLLGSGAHLKAGTPHAEVHALEQ 63
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AG+ A+G+T YV+LEPCNHYGRTPPCTE I + V++VVVG DP+P+V+ KG++RLR+A
Sbjct: 64 AGKSAKGSTLYVTLEPCNHYGRTPPCTERTISSGVRRVVVGSTDPDPLVSGKGVQRLREA 123
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ 252
G+ V GV + C RLNEA+ H TG PF TL+ ++++G G+ +G +
Sbjct: 124 GLSVKTGVLADRCTRLNEAYFHHRRTGFPFVTLKAAVTLDGKTATSDGDSRWVTGEAARE 183
Query: 253 ----LLQEYDAIILSASST--KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
L +YDA+++ + + + + P R++ S P+ P ES+
Sbjct: 184 EVHRLRHQYDAVLVGSGTALHDRPQLTVRLPGGGKNPLRVVVDSRLRMPLNSPLADVESA 243
Query: 307 SKVIVFTD-GEITVEPDMGTKGIETVNLH---QLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
S + TD + E + +G+ ++ L++V G SVL + G
Sbjct: 244 STWVFCTDEADSGREAALTARGVRVYRTGAGPRVKLESVFRRLGREGIVSVLTESGGELN 303
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSD-----GGNPHTLLNSLGKRLILKNLQPKMS 417
LL+EG ++ I ++L G D GG T ++ + L+L+++ +
Sbjct: 304 --ASLLREGWVNKVMFFIAPKIL---GGRDSLTAVGG---TTVDQMKDALLLEDVSVDLF 355
Query: 418 SQSIVLEG 425
+ I + G
Sbjct: 356 GRDICVTG 363
>gi|403668251|ref|ZP_10933527.1| riboflavin biosynthesis protein ribD [Kurthia sp. JC8E]
Length = 366
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 188/327 (57%), Gaps = 24/327 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D +YM+ ++LA A G+T+PNPMVG VIV++G IVG G H KAG+PHAEV A R AG
Sbjct: 3 KTDEYYMQLALDLAVSAKGNTNPNPMVGAVIVQNGVIVGTGLHRKAGEPHAEVHAFRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC + ++ VK+VV+ M DPNP V +G++ LRDAGI
Sbjct: 63 EHAKGATLYVTLEPCSHYGKTPPCANLVKESGVKRVVIAMEDPNPSVAGRGVKLLRDAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V VG+ + +LNE FIH ++T +PF +Y ++ +G + G+ +G + +
Sbjct: 123 EVEVGILEAQAYKLNERFIHNMLTSRPFVVSKYAMTADGKIAVSNGDSRWVTGDDAREDV 182
Query: 255 QEY----DAIILS-----ASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
EY D I++ A + S+E P RII +P+ +++ +
Sbjct: 183 HEYRHEMDGILVGIGTVLADDPSLTTRLVSKE--GKNPIRIILDRQLRTPLH-AKVAQTA 239
Query: 306 SSKVIVFT--DGEITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRG 359
+K I+ T D I + +G+E + + QL+L+ +LD Y+ G +LV+ G
Sbjct: 240 DAKTIIVTAEDAAIEKAQALQAQGVEILRVATTEGQLHLEEMLDALYTRGITDILVE--G 297
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP 386
+ Q+L+QK+++ + P
Sbjct: 298 GAAVHASFFR----QHLVQKVLIYMAP 320
>gi|302390233|ref|YP_003826054.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Thermosediminibacter oceani DSM 16646]
gi|302200861|gb|ADL08431.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
;5-amino-6-(5-phosphoribosylamino)uracil reductase
[Thermosediminibacter oceani DSM 16646]
Length = 373
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 193/340 (56%), Gaps = 23/340 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+MRR ++LA K G+TSPNPMVG V+VKDG+IVGEG+H KAG+PHAEV AL A E
Sbjct: 4 DVFFMRRALDLAKKGRGTTSPNPMVGAVVVKDGEIVGEGYHRKAGEPHAEVEALAQAAER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA YV+LEPC HYGRTPPC + +I+A VK+VV M DPNP+V KG++RL++AGI+V
Sbjct: 64 ARGAELYVNLEPCCHYGRTPPCADTIIRAGVKRVVAAMADPNPLVAGKGIKRLKEAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
VGV +E K+LNE FI I+TGKPF + S +G + GE +G +
Sbjct: 124 VVGVLEEEAKKLNEVFIKYIITGKPFVVAKIAQSFDGKIAMASGESRWITGEPARVKAHE 183
Query: 253 LLQEYDAIILSASSTKKYS-IPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVI 310
L YDAI++ + + + P+ + P RI+ S P L E ++
Sbjct: 184 LRSWYDAIMVGVGTVMADDPLLTCRLPEKRKNPVRIVVDSGARMPPDARMLRCEGGRVIL 243
Query: 311 VFTD-GEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
T+ + + +G+E + + +++L +++ G SVLV+
Sbjct: 244 ATTERADSERVSALKERGVEVIKVPPAEGRVDLSRLMEILGGMGITSVLVE------GGS 297
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGK 405
L I+ NL+ K++V V PV G +G ++S+GK
Sbjct: 298 TLTSSLIKGNLVDKLLVFVAPVVIGGEG------IDSVGK 331
>gi|212638856|ref|YP_002315376.1| riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
flavithermus WK1]
gi|212560336|gb|ACJ33391.1| Riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
flavithermus WK1]
Length = 358
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 152/241 (63%), Gaps = 6/241 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR ++LA A G TSPNP+VG V+VK G+IVG G H KAG+PHAEV ALR AGE
Sbjct: 2 DEQYMRFALQLAQSARGQTSPNPLVGAVVVKHGEIVGFGAHLKAGEPHAEVHALRMAGEK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC+HYGRTPPC + LI+ KVK+VVV DPNP+V KG+E+L+ AGIDV
Sbjct: 62 AEGATVYVTLEPCSHYGRTPPCADLLIEKKVKRVVVATTDPNPLVAGKGIEKLKRAGIDV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-VAESGGYYSQLLQ 255
TVGV E LNE F H I T P+ TL+Y +S++G + + GE S + +
Sbjct: 122 TVGVLKEEADALNEMFFHYISTKTPYVTLKYAMSLDGKIATKTGESKWITSEDARRDVHR 181
Query: 256 E---YDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
E +DAI++ + S+ + QP RI+ ++ +P+ ++++ + I
Sbjct: 182 ERRMHDAIVVGVGTILADDPSLTVRFGYEGKQPIRIVLDTHLRTPLHANVVTDQKAPTWI 241
Query: 311 V 311
V
Sbjct: 242 V 242
>gi|338731395|ref|YP_004660787.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thermotoga
thermarum DSM 5069]
gi|335365746|gb|AEH51691.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Thermotoga thermarum DSM 5069]
Length = 367
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 182/331 (54%), Gaps = 32/331 (9%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM ++LA K +TSPNPMVG VIVKDGKI+ G+H KAGQPHAE+ AL A+
Sbjct: 6 YMSLALKLAKKGKYTTSPNPMVGAVIVKDGKILATGYHKKAGQPHAEINALSKLNFQAQN 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
YV+LEPC+HYGRTPPC +A+I++ ++KVV+ LDPNP+VN KG+E+L++AGI+V G
Sbjct: 66 CEMYVTLEPCSHYGRTPPCADAIIRSGIRKVVIATLDPNPLVNGKGVEKLKNAGIEVVCG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQ 255
V +E K+LNE F I T PF L+ +++G + + GE +S Y +L
Sbjct: 126 VLEEKAKKLNEKFFKYITTKIPFVALKIAQTLDGKIALKNGESKWITSEKSREYVHKLRM 185
Query: 256 EYDAIILSASSTKKYSIPASQEPDAN--------QPFRIITVSNHASPIRIPGLSEESSS 307
EYDA++ + K +P N QP RII S P+ L E S
Sbjct: 186 EYDAVLTGIGTILK------DDPQLNVRLKKVYKQPLRIILDSKLKIPLSAKVL--EDPS 237
Query: 308 KVIVFTDGEITVEP--DMGTKGIETVNLHQLN----LKAVLDYCYSHGFCSVLVDLRGNY 361
KVI+ T E ++ +KG+E + ++ N L++ L SV+V+
Sbjct: 238 KVIILTTALADKEKLEELRSKGVEVIITNEKNGIVDLESALKILGEKKITSVMVEAGPT- 296
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD 392
LL ++++L KI + + P G+D
Sbjct: 297 -----LLTSFLKESLFDKIYLFIAPKIFGAD 322
>gi|148264237|ref|YP_001230943.1| riboflavin biosynthesis protein RibD [Geobacter uraniireducens Rf4]
gi|146397737|gb|ABQ26370.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Geobacter uraniireducens Rf4]
Length = 368
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 190/359 (52%), Gaps = 18/359 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
M+R + LA + +G T+PNP VGCVIVKDG +VGEG+H KAG PHAEV ALR AGE+A G
Sbjct: 8 MMKRAIVLAKRGIGRTAPNPTVGCVIVKDGAVVGEGWHKKAGTPHAEVHALRQAGEMARG 67
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A YV+LEPC H+G+TPPC +ALI AKV +V +GM+DPNP V +G+ LR AGI+V V
Sbjct: 68 ADVYVTLEPCAHFGKTPPCADALIAAKVCRVHIGMVDPNPRVCGEGISMLRSAGIEVVVS 127
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQ 255
V ++ C+ LNE FI + TG PF L+ ++++G D +S Y +L
Sbjct: 128 VLEDNCRSLNEPFIKHMTTGLPFVILKSAMTLDGKTATAGKDSKWITSDKSRQYVHKLRA 187
Query: 256 EYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
+ DAI++ + + S+ P P R+I S P+ L +S +K ++ T
Sbjct: 188 KLDAIMVGVGTVMADDPLLTSRIPAGRDPLRVIVDSTLRIPLSSQVLHVDSPAKTVIATI 247
Query: 315 GEITVE-PDMGTKGIETVNLHQLNLKAVLDYCYSH----GFCSVLVDLRGNYGDLEMLLK 369
+ + + G + + Q N + L + G S+L++ G L
Sbjct: 248 SDDEAQAARITASGADVLRCRQKNGRVDLHDLFVKLGGLGVQSLLLEGGGA------LAG 301
Query: 370 EGIEQNLLQKIVVEVLPVWNGSDGGNPHT--LLNSLGKRLILKNLQPKMSSQSIVLEGY 426
E + L+ K + P G +G P + + + + LKN+ I+++GY
Sbjct: 302 EALRCGLIDKCMFFYAPKLVGGEGLGPFSGKGVELMADAITLKNISITKIGSDILVQGY 360
>gi|389720974|ref|ZP_10187730.1| pyrimidine deaminase [Acinetobacter sp. HA]
gi|388609255|gb|EIM38447.1| pyrimidine deaminase [Acinetobacter sp. HA]
Length = 362
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 127/184 (69%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MRR +ELA + ST PNP VGCVIVKDG +VGEGFHPKAGQPHAEVFA+R AGE
Sbjct: 7 DQIWMRRAIELARQGQYSTKPNPNVGCVIVKDGVVVGEGFHPKAGQPHAEVFAMRQAGEQ 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC HYGRTPPC + L++A V KVVV DPNP+V KG++ L+DAGI+V
Sbjct: 67 AHGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVVVACPDPNPLVAGKGVQILKDAGINV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ ++ LN F+ + TG P+ ++ LS++G GE +G Q +Q
Sbjct: 127 EVGICEDEAHPLNYGFLKAMATGMPYVRVKIALSLDGRTAMASGESKWITGIEARQDVQH 186
Query: 257 YDAI 260
+ AI
Sbjct: 187 WRAI 190
>gi|294648973|ref|ZP_06726421.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus
ATCC 19194]
gi|292825108|gb|EFF83863.1| riboflavin biosynthesis protein RibD [Acinetobacter haemolyticus
ATCC 19194]
Length = 366
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 127/182 (69%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
++M+R ++LA ST PNP VGCVIVKDG+I+GEGFHPKAGQPHAEVFALR AGE A+
Sbjct: 14 YWMQRAIDLARLGQYSTKPNPNVGCVIVKDGQILGEGFHPKAGQPHAEVFALRQAGENAK 73
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
AT YV+LEPC HYGRTPPC EAL+KA+VKKVV+ DPNP+V KG++ L+DAGI+V
Sbjct: 74 DATVYVTLEPCAHYGRTPPCAEALVKAQVKKVVIACSDPNPLVAGKGVKILQDAGIEVET 133
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYD 258
GV E K LN F+ + TG P+ L+ S++G GE +G Q +Q +
Sbjct: 134 GVCTENAKGLNLGFLKAMSTGLPYVRLKIASSLDGRTAMASGESKWITGTLARQDVQHWR 193
Query: 259 AI 260
AI
Sbjct: 194 AI 195
>gi|410087040|ref|ZP_11283745.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii SC01]
gi|409766269|gb|EKN50363.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii SC01]
Length = 370
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 190/353 (53%), Gaps = 49/353 (13%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R +ELA +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 5 DEFYMARALELAALGRFTTAPNPNVGCVIVRDGEIVGEGYHQRAGEPHAEVHALRMAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL +LR+AGI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCAEALINAGVSRVVAAMQDPNPQVAGRGLFKLREAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ GV + + LN+ F R+ TG P+ L+ S++G GE + Q +Q+
Sbjct: 125 SHGVLMQEAEALNKGFFKRMRTGFPYIQLKMAASIDGKTALANGESQWITSKAARQDVQQ 184
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIIT-----VSNHA 293
+ A ILS S+T + PAS E D QP RIIT V+
Sbjct: 185 FRAQAGAILSTSATVLADDPGLTVRHADFPASLQQSYPEADIRQPVRIITDSRQRVTAQH 244
Query: 294 SPIRIPG---LSEESSSKVIVFTDGEITVEPDMGTKGIETV----NLHQLNLKAVLDYCY 346
++PG L+ +S D E + P+ G+ G++ V L + N+ + C
Sbjct: 245 RVTQLPGSCWLARTASQPDNWQGDVEEMILPENGS-GVDLVLLMMQLGKRNINHIWTECG 303
Query: 347 SHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL 399
SH + LLK G L +IV+ + P GSD + TL
Sbjct: 304 SHMAGA--------------LLKAG----LADEIVLYLAPKILGSDAQDLFTL 338
>gi|366166345|ref|ZP_09466100.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Acetivibrio cellulolyticus CD2]
Length = 369
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 207/369 (56%), Gaps = 23/369 (6%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
+K+D +YM R +ELA K G T+PNP+VG VIVKD +I+ EGFH G HAEV A ++A
Sbjct: 2 NKND-YYMSRAIELAKKGWGRTNPNPLVGAVIVKDERIIAEGFHEVIGGAHAEVSAFKNA 60
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
E G T YV+LEPC+HYGRTPPC +A+I+AK+KKVVV M+DPNP V+ +G++ LRDAG
Sbjct: 61 VEDVAGGTLYVNLEPCSHYGRTPPCAKAIIEAKIKKVVVAMIDPNPKVSGRGVQMLRDAG 120
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYY 250
I+V VGV ++ K+LNE FI+ +V KPF L+ ++++G + G+ +E+ Y
Sbjct: 121 IEVEVGVLEDEAKKLNEIFINYVVNKKPFVILKTAMTIDGKIASVSGDSKWVTSEASRGY 180
Query: 251 SQLLQEYDAIILSASST--KKYSIPASQEPD--ANQPFRIITVSNHASPIRIPGLSEESS 306
++++ A I+ +T K + ++ D P RI+ S P L+ +S
Sbjct: 181 VHIIRDRVASIMVGINTIVKDNPMLTTRLNDKVGTDPIRIVVDSKGIIPEDSRVLNSDSK 240
Query: 307 SKVIVFTDGEITVEPDMG--TKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
+ V++ T I E +M KG++ + +++L + + Y S+L++ GN
Sbjct: 241 AVVVLATTSNILKEKEMYLIDKGVKIIKADGADGRVDLVKLTEELYKLEIDSILLEGGGN 300
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMS 417
L +E ++ K + + P + G + P +N + + LK++
Sbjct: 301 ------LNAAALEAGIVDKAMFFIAPKILGGKEAVTPVEGRGINLMSDAVKLKDVSVSRY 354
Query: 418 SQSIVLEGY 426
+ I++EGY
Sbjct: 355 GEDILVEGY 363
>gi|254286058|ref|ZP_04961019.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226]
gi|150423968|gb|EDN15908.1| riboflavin biosynthesis protein RibD [Vibrio cholerae AM-19226]
Length = 367
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 182/344 (52%), Gaps = 51/344 (14%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 THGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH------ 292
+ A ILS S T + Y +P+S E D QP R+I H
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 293 ---ASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHG 349
+P + ++ E++ I +G++ + ++ + + N+HQL ++A
Sbjct: 248 ALYQTPSPVLRVASENAELCISAENGKLDLR-ELLAQLAQQHNVHQLWVEAG-------- 298
Query: 350 FCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K IEQ L+ +I++ + P GSDG
Sbjct: 299 ---------------SQLAKSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|153826812|ref|ZP_01979479.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2]
gi|149739399|gb|EDM53641.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-2]
Length = 367
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 176/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + + G +L+L+ +L H + V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAENG----------KLDLRELLAQLAQKHNVNQLWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAKSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|86147437|ref|ZP_01065749.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222]
gi|85834730|gb|EAQ52876.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio sp. MED222]
Length = 364
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 194/346 (56%), Gaps = 43/346 (12%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
M R ++LA + + +T+PNP VGCVIV+ DG+IVGEGFH KAG+PHAEV A+R AG+ A+G
Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMAGDKAKG 61
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC+HYGRTPPC E LIKA+V KV+ M DPNP V +G++ LRDAGIDV +G
Sbjct: 62 ATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIDVEIG 121
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA 259
+ ++ LN AFI R+ TG PF L+ S++G + G+ + + +Q Y A
Sbjct: 122 LLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSPEARRDVQNYRA 181
Query: 260 ---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRIPGL 301
+LS S T + +P+S E + QP R+I + + +R P L
Sbjct: 182 KSGAVLSTSQTVIDDNASLNVRWAELPSSIKDHYAEDELRQPIRVIL--DRQNQLR-PEL 238
Query: 302 SEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQL--NLKAV-LDYCYSHGFCSVLVDLR 358
+ + V E + + ++GT + ++LH L L A +D+ + +
Sbjct: 239 -KLFQTPTSVLRVAEASADIEVGTTEVGQLDLHDLMRQLPANHIDHIWVEAGAT------ 291
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L K IE L+ ++++ + P GSDG L+ +LG
Sbjct: 292 --------LAKSLIEARLVDELILYLAPKLMGSDG---RGLMGALG 326
>gi|163783070|ref|ZP_02178065.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881750|gb|EDP75259.1| riboflavin specific deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 362
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 174/304 (57%), Gaps = 8/304 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM + LA + G T PNP VGCV+V +G+IVG G+H AG PHAEV AL AGE A+G
Sbjct: 6 YMSLALSLAKRRKGLTHPNPTVGCVVVNEGEIVGLGYHEGAGHPHAEVVALEQAGEKAKG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+T YV+LEPC H+GRTPPCT+ALI+A ++K VV + DPNP+V KG+ERLR+AG+DV VG
Sbjct: 66 STLYVTLEPCTHFGRTPPCTDALIRAGIRKAVVAVKDPNPVVGGKGIERLREAGLDVEVG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GVAESGGYYSQLLQ 255
V +E + LNE F I +P+ TL+ +++G V G+ ES + +L
Sbjct: 126 VLEEEARELNEDFFTFITMKRPYVTLKLAQTLDGKVATPSGDSKWISSPESRRFAHRLRS 185
Query: 256 EYDAIILSASSTKKY--SIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
E A+++ ++ + S+ P QP RI+ P+ +S+ + ++VF+
Sbjct: 186 EATAVLVGLNTFLRDNPSLTIRHIPFGRQPLRIVIDPELEIPMDSNLVSDGMAQTLVVFS 245
Query: 314 DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIE 373
+ E ++ G++ + + ++ L +L S +LV+ G + LKEG+
Sbjct: 246 RRDPAKESELLGAGVQLLYMEKIELGELLKELASRDVLHLLVE--GGAYTVSQFLKEGLW 303
Query: 374 QNLL 377
L+
Sbjct: 304 DRLV 307
>gi|39996788|ref|NP_952739.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Geobacter sulfurreducens PCA]
gi|409912207|ref|YP_006890672.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Geobacter sulfurreducens KN400]
gi|39983676|gb|AAR35066.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Geobacter sulfurreducens PCA]
gi|307634902|gb|ADI84522.2| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Geobacter sulfurreducens KN400]
Length = 369
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 194/359 (54%), Gaps = 19/359 (5%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
MRR + LA K +G TSPNP+VGCVIV++G +VGEG+H KAG PHAEV ALR+AG LA GA
Sbjct: 9 MRRALSLARKGIGKTSPNPVVGCVIVREGVVVGEGWHRKAGTPHAEVHALREAGPLARGA 68
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
YV+LEPC+H+GRTPPC +AL+ A V +V VGM+DPNP V KG+ RL GI V GV
Sbjct: 69 DVYVTLEPCSHFGRTPPCADALVAAGVARVFVGMVDPNPTVCGKGITRLEAVGIQVITGV 128
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQLLQE 256
+ C+ +NE F+ + TG PF TL+ L+++G LG+ +S Y QL E
Sbjct: 129 LGKECRLINEPFVKHVSTGLPFLTLKSALTLDGKTATALGDSRWITNDKSRRYVHQLRAE 188
Query: 257 YDAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDG 315
DA+++ + + + + P RII S+ P L ++ + I+ T
Sbjct: 189 VDAVMVGVGTLLADNPELTVRHVKGKNPLRIIVDSSLKIPNESRVLGDDLARGTIIATTS 248
Query: 316 EITVEPD-MGTKGIETV----NLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
+ + T+G + + + +++L+ ++ + G S+L++ G E L
Sbjct: 249 DDQERIGFLETRGAQVIRCASDKGRVDLRDLMQRLGAKGIQSILLE-----GGSE-LAGA 302
Query: 371 GIEQNLLQKIVVEVLPVWNGSDGG---NPHTLLNSLGKRLILKNLQPKMSSQSIVLEGY 426
+ Q L+ K ++ P+ G G + +G+ L+ + + +++E Y
Sbjct: 303 ALRQGLIDKFILFYAPIVLGGAAGIGLFGGKSVERMGRAFRLETARVRRFGGDVMIEAY 361
>gi|335428671|ref|ZP_08555581.1| riboflavin biosynthesis protein RibD [Haloplasma contractile
SSD-17B]
gi|335430947|ref|ZP_08557833.1| riboflavin biosynthesis protein RibD [Haloplasma contractile
SSD-17B]
gi|334887487|gb|EGM25819.1| riboflavin biosynthesis protein RibD [Haloplasma contractile
SSD-17B]
gi|334891612|gb|EGM29858.1| riboflavin biosynthesis protein RibD [Haloplasma contractile
SSD-17B]
Length = 369
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 208/369 (56%), Gaps = 26/369 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R +EL+ K +G TSPNP+VG VIVKDG I+GEG+H G HAEV A ++A E
Sbjct: 2 DQKFMKRAIELSKKGIGYTSPNPLVGAVIVKDGTIIGEGYHEVYGSHHAEVNAFKNATED 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GAT YV+LEPC+HYG+TPPC + ++K K+K+VV+ + DPNP+V+ +G++ L D GI V
Sbjct: 62 VTGATMYVTLEPCSHYGKTPPCADLIVKKKIKEVVIALKDPNPLVSGRGIKILEDNGIKV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
T G+ + C+++NE F+H I G PF L+ ++++G + + G +G + +
Sbjct: 122 TTGILESECRKVNEIFLHYITKGTPFCILKTAMTLDGKIATKTGHSKWITGDSSRKHVHK 181
Query: 253 LLQEYDAIILSASSTKKYS---IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L + AI++ + + + ++ D P R+I + P+ LS +SS+
Sbjct: 182 LRHQVSAIMVGIDTVIEDNPLLTTRLEKQDGRDPIRVIVDTTARIPLDANVLSNDSSAAT 241
Query: 310 IVFT-----DGEITVEPDMGTKGIET-VNLHQLNLKAVLDYCYSHGFCSVLVDLRG--NY 361
I+ T +I + D G I T + ++++L+ +L+ SVL++ NY
Sbjct: 242 IIATTERAPKDKIELLKDRGADVIVTRLKNNRVDLQDLLNQLGERKIDSVLIEGGSTLNY 301
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSS 418
LL+EG L+ K++ + P + GS P ++++ + L L+++Q
Sbjct: 302 S----LLQEG----LIHKVMTYIAPKLIGGSTAKTPVGGQGVSTMDEALHLQDIQVSHFD 353
Query: 419 QSIVLEGYL 427
+ I++EGY+
Sbjct: 354 EDIMIEGYI 362
>gi|419837977|ref|ZP_14361415.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46B1]
gi|421354969|ref|ZP_15805301.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-45]
gi|423735934|ref|ZP_17709126.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41B1]
gi|424010272|ref|ZP_17753206.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-44C1]
gi|395954094|gb|EJH64707.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-45]
gi|408629360|gb|EKL02059.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41B1]
gi|408856525|gb|EKL96220.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46B1]
gi|408863302|gb|EKM02792.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-44C1]
Length = 365
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 176/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 245
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + + G +L+L+ +L H + V+
Sbjct: 246 ALYQTPSPMLRVASENAELCISAENG----------KLDLRELLAQLAQQHNVNQLWVEA 295
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K IEQ L+ +I++ + P GSDG
Sbjct: 296 GSQ------LAKSLIEQKLVDEIILYLAPKLMGSDG 325
>gi|297580914|ref|ZP_06942839.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385]
gi|297534740|gb|EFH73576.1| riboflavin biosynthesis protein RibD [Vibrio cholerae RC385]
Length = 367
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 176/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + + G +L+L+ +L H + V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAEHG----------KLDLRELLAQLAQQHNVNQLWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAKSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|325289915|ref|YP_004266096.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Syntrophobotulus glycolicus DSM 8271]
gi|324965316|gb|ADY56095.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Syntrophobotulus glycolicus DSM 8271]
Length = 398
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 199/380 (52%), Gaps = 22/380 (5%)
Query: 63 YRIRCGQVQNNDKD-DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAG 121
+ +R ++Q D D FYM+R ++LA A G TSPNPMVGC+IVKDG I+GEG+H KAG
Sbjct: 24 FYLRVIKMQTGFSDQDKFYMQRALDLAEMAEGRTSPNPMVGCLIVKDGLIIGEGYHQKAG 83
Query: 122 QPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIV 181
PHAEV AL AG+ A GA YV+LEPC+H+GRTPPC +ALI+A VK+V V ++DPNP+V
Sbjct: 84 TPHAEVHALTAAGKRASGADVYVTLEPCSHFGRTPPCCDALIQAGVKRVFVALVDPNPLV 143
Query: 182 NSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
KG++++R AGI+V G+ + +LNE F+ + T PF + + +G G+
Sbjct: 144 RGKGIQKMRAAGIEVFTGLLENEAAKLNEPFVKAMKTNLPFVLYKSASTADGKTASCTGD 203
Query: 242 GVA----ESGGYYSQLLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASP 295
S Y +L YD +I+ S T P + P R+I + P
Sbjct: 204 SRWITNDLSRKYVHELRNSYD-VIMVGSKTILQDNPQLTCRIAGGRHPVRLIVDGTLSIP 262
Query: 296 IRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNL------HQLNLKAVLDYCYSHG 349
LS S +I T + D K + + + LK ++ G
Sbjct: 263 EEARLLSLSEGSTIIATTRAASPKKIDKLKKIRNNIEVWVYSEERYVPLKTLMQDILEKG 322
Query: 350 FCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHT--LLNSLGKRL 407
+ SVL++ G L + I + L+ K+ + + P G +P + +NS+ +
Sbjct: 323 YQSVLLEGGGT------LAGQMIAEKLVDKVNLFIAPKIIGQSSFSPISGFCINSMADAV 376
Query: 408 ILKNLQPKMSSQSIVLEGYL 427
+++ ++ K + I+L GYL
Sbjct: 377 MIREMEMKEFAGDILLSGYL 396
>gi|421344015|ref|ZP_15794418.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43B1]
gi|395940095|gb|EJH50776.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43B1]
Length = 367
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 176/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + + G +L+L+ +L H + V+
Sbjct: 248 ALYQTPSPMLRVASENAELCISAENG----------KLDLRELLAQLAQQHNVNQLWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAKSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|262190240|ref|ZP_06048514.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae CT 5369-93]
gi|262033885|gb|EEY52351.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae CT 5369-93]
Length = 365
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 176/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARALNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 245
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + + G +L+L+ +L H + V+
Sbjct: 246 ALYQTPSPVLRVASENAELCISAENG----------KLDLRELLAQLAQQHNVNQLWVEA 295
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 296 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 325
>gi|387770216|ref|ZP_10126399.1| riboflavin biosynthesis protein RibD [Pasteurella bettyae CCUG
2042]
gi|386904578|gb|EIJ69367.1| riboflavin biosynthesis protein RibD [Pasteurella bettyae CCUG
2042]
Length = 373
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/244 (44%), Positives = 151/244 (61%), Gaps = 21/244 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ +ELA K +T+PNP VGCV+VK+G IVG+GFH KAG+PHAEV A+R+AGE
Sbjct: 8 DQHFMQLAMELAAKGQFTTTPNPAVGCVLVKNGNIVGKGFHFKAGEPHAEVMAMREAGEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC + LI+A + KV+V M DPNP V+ KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHFGRTPPCAKGLIEAGIAKVIVAMQDPNPSVSGKGLKMLMDAGIET 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+VG+ E + LN+ F+ R+ TG P+ L+ +S++G GE E QL
Sbjct: 128 SVGLLQEQAEALNKGFLKRMRTGMPYLQLKMAMSIDGRTATAEGESKWITGEQARADVQL 187
Query: 254 LQEYDAIILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ + ILSAS+T + P+ ++ QP R+I S H +
Sbjct: 188 QRAKASAILSASNTVLKDNPNLNVRWEQFPSELQSQYKKEQLRQPIRVIIDSKHRV---L 244
Query: 299 PGLS 302
PGL+
Sbjct: 245 PGLN 248
>gi|85860188|ref|YP_462390.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Syntrophus aciditrophicus SB]
gi|85723279|gb|ABC78222.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Syntrophus aciditrophicus SB]
Length = 380
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 185/333 (55%), Gaps = 30/333 (9%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D FYM+R ++LA K G SPNPMVG VIVK+ +I+GEG+H K G+ HAE+ AL A E
Sbjct: 2 NDEFYMKRALQLARKGEGWVSPNPMVGSVIVKNDRIIGEGYHRKFGEAHAEINALNGAKE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
AEG+T YVSLEPC+HYG+TPPC E L+ + K+VV+G DPNP+V +G+ L+ GI+
Sbjct: 62 SAEGSTIYVSLEPCSHYGKTPPCVERLVACRPKRVVIGTTDPNPLVAGRGIGILKRNGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GVAESGGYYS 251
VTVGV +E+C+ +NE+F+ I PF TL+Y +++G + G S +
Sbjct: 122 VTVGVLEEVCREINESFLKFIQFRIPFVTLKYAQTLDGRIATSTGHSRWISSPPSRRFAH 181
Query: 252 QLLQEYDAIILSASSTKKYSIPASQEPD-------ANQPFRIITVSNHASPIRIPGLSEE 304
+L +DAI++ + S +P+ P RI+ S P+ L E+
Sbjct: 182 RLRHAHDAILVGIGTV------LSDDPELTVRLVRGKNPLRIVLDSRLRIPLTARILQEQ 235
Query: 305 SSSKVIVFTDGEITVEP--DMGTKGIETVNL-----HQLNLKAVLDYCYSHGFCSVLVDL 357
+K ++ T + + +GIET+ L +++L +L S G SVLV+
Sbjct: 236 DQAKTLMVTTDHADRKKLSQLNDRGIETLILPVESSGRIDLNRLLRELGSRGIASVLVE- 294
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNG 390
G G L L+ Q+L +++ + P +G
Sbjct: 295 -GGSGILTALMA----QDLADRLIAIIAPKISG 322
>gi|421856815|ref|ZP_16289174.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|403187717|dbj|GAB75375.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 362
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 125/184 (67%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYMRR +ELA ST PNP VGCVIVKDG+I+GEG+HP+AGQPHAEVFALR AGE
Sbjct: 8 DYFYMRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQPHAEVFALRQAGEQ 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+ ATAYV+LEPC HYGRTPPC EAL+K ++KKVV+ DPNP+V KG+ L+ AGIDV
Sbjct: 68 AQDATAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGKGIAILKQAGIDV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +LN F+ + G P+ L+ S++G GE +G Q +Q
Sbjct: 128 ESGICENEAVQLNCGFLKAMAVGMPYVRLKVASSLDGRTAMASGESKWITGKAARQDVQH 187
Query: 257 YDAI 260
+ AI
Sbjct: 188 WRAI 191
>gi|392426227|ref|YP_006467221.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Desulfosporosinus acidiphilus SJ4]
gi|391356190|gb|AFM41889.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Desulfosporosinus acidiphilus SJ4]
Length = 390
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 197/364 (54%), Gaps = 19/364 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM + +ELA A+G TSPNP+VGCVIVK+ +IVG+G+H KAG PHAE+ AL +A +
Sbjct: 12 DEIYMSKALELAALALGRTSPNPVVGCVIVKNDQIVGKGYHRKAGTPHAEIHALSEAKDQ 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC++ALI+A VK+VVV + DPNP+V G++RL +AGI V
Sbjct: 72 ARGATAYVTLEPCSHFGRTPPCSDALIRAGVKRVVVALKDPNPLVAGGGIQRLHEAGIPV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
VGV LNEAF I T PF + L+++G + + G+ ES Y
Sbjct: 132 EVGVMSHEAAMLNEAFFKAITTKMPFVLYKTALTLDGKIATETGDSRWVSNESSRRYVHQ 191
Query: 254 LQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L+ Y +IL S T PA + P P R+I P L+ S I+
Sbjct: 192 LRNYYDVILVGSGTILRDNPALTCRLPGGRDPIRLIVDGELRIPENSQVLTSSGESPCII 251
Query: 312 FTDGEITVEPDMGTKGIETVNLHQLN------LKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
T +E +E + + Q + +K +L +S G+ SVL++ G
Sbjct: 252 ATTKAAPIEKLKQLTKLENLEIWQYDTPRHVPVKEMLKDLFSRGWNSVLLEGGGT----- 306
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNS--LGKRLILKNLQPKMSSQSIVL 423
L I++ + K+ + P G +G +P + L+ + + + L +LQ + I +
Sbjct: 307 -LAGTLIQEQCVDKLECFIAPKLVGGNGPSPLSGLHIPLMSEAIDLHDLQVDTTFGDIHV 365
Query: 424 EGYL 427
GYL
Sbjct: 366 TGYL 369
>gi|153216165|ref|ZP_01950304.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587]
gi|124114423|gb|EAY33243.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 1587]
Length = 367
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 174/335 (51%), Gaps = 33/335 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R A EL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQASEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPQSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + E ++L +L + H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAEN-----EKLDLREL----LAQLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
G L K IEQ L+ +I++ + P GSDG
Sbjct: 299 GQ------LAKSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|343505430|ref|ZP_08743002.1| riboflavin-specific deaminase [Vibrio ichthyoenteri ATCC 700023]
gi|342807728|gb|EGU42908.1| riboflavin-specific deaminase [Vibrio ichthyoenteri ATCC 700023]
Length = 368
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 183/338 (54%), Gaps = 39/338 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI +DG+IVGEGFH +AG+PHAEV ALR AGEL
Sbjct: 8 DFLMMSRAIKLAQGGIYTTAPNPNVGCVITRDGQIVGEGFHFRAGEPHAEVHALRMAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LI AKV KV+ M DPNP V+ +G+ LR+AGI+V
Sbjct: 68 AEGATAYVTLEPCSHYGRTPPCAEGLINAKVAKVICAMQDPNPQVSGRGIRMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
VG+ + + LN AFI R+ TG PF L+ S++G G + Q+
Sbjct: 128 QVGLLEADAQALNPAFIKRMQTGMPFVQLKMAASLDGQTALANGHSQWITSAQARQDVQV 187
Query: 254 LQEYDAIILSASST----------KKYSIPASQEP-----DANQPFRII--TVSNHASPI 296
L+ ILS S T + +P S + QP R+I S ++ +
Sbjct: 188 LRAQSGAILSTSQTVIEDNASLNVRWDDLPKSLQAHYPAEHLRQPVRVILDRQSKLSADL 247
Query: 297 RIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDY-CYSHGFCSVLV 355
+ L + +++V +G+I ++ +Q++L+A + H + V
Sbjct: 248 K---LFQTGGERLVVAPNGDIECPLNVD---------NQVDLRATFEMLAKQHNINHIWV 295
Query: 356 DLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
+ L I+Q L+ ++V+ + P GSDG
Sbjct: 296 EAGAT------LASSLIQQQLVDEVVLYLAPKLMGSDG 327
>gi|433444753|ref|ZP_20409495.1| riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
flavithermus TNO-09.006]
gi|432001293|gb|ELK22171.1| riboflavin-specific pyrimidine reductase/deaminase [Anoxybacillus
flavithermus TNO-09.006]
Length = 358
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 152/241 (63%), Gaps = 6/241 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR ++LA A G TSPNP+VG V+VK G+IVG G H KAG+PHAEV ALR AGE
Sbjct: 2 DEQYMRFALQLAQSARGQTSPNPLVGAVVVKHGEIVGFGAHLKAGEPHAEVHALRMAGEK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC+HYG+TPPC + LI+ KVK+VVV DPNP+V KG+E+L+ AGID+
Sbjct: 62 AEGATVYVTLEPCSHYGKTPPCADLLIEKKVKRVVVTTTDPNPLVAGKGIEKLKRAGIDI 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-VAESGGYYSQLLQ 255
TVGV E LNE F H I T P+ TL+Y +S++G + + GE S + +
Sbjct: 122 TVGVLKEEADALNEMFFHYISTKTPYVTLKYAMSLDGKIATKTGESKWITSEDARRDVHR 181
Query: 256 E---YDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
E +DAI++ + S+ + QP RI+ ++ +P+ ++++ + I
Sbjct: 182 ERRMHDAIVVGVGTILADDPSLTVRFGYEGKQPIRIVLDTHLRTPLHANVITDQKAPTWI 241
Query: 311 V 311
V
Sbjct: 242 V 242
>gi|421492875|ref|ZP_15940234.1| hypothetical protein MU9_1404 [Morganella morganii subsp. morganii
KT]
gi|455740416|ref|YP_007506682.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii subsp. morganii KT]
gi|400192980|gb|EJO26117.1| hypothetical protein MU9_1404 [Morganella morganii subsp. morganii
KT]
gi|455421979|gb|AGG32309.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Morganella
morganii subsp. morganii KT]
Length = 370
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 189/353 (53%), Gaps = 49/353 (13%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R +ELA +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 5 DEFYMARALELAALGRFTTAPNPNVGCVIVRDGEIVGEGYHQRAGEPHAEVHALRMAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL +LR+AGI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCAEALINAGVSRVVAAMQDPNPQVAGRGLFKLREAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ GV + + LN+ F R+ TG P+ L+ S++G GE + Q +Q+
Sbjct: 125 SHGVLMQEAEALNKGFFKRMRTGFPYIQLKMAASIDGKTALANGESQWITSKAARQDVQQ 184
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIIT-----VSNHA 293
+ A ILS S+T + PAS E D QP RIIT V+
Sbjct: 185 FRAQAGAILSTSATVLADDPGLTVRHADFPASLQQSYPETDIRQPVRIITDSRQRVTAQH 244
Query: 294 SPIRIPG---LSEESSSKVIVFTDGEITVEPDMGTKGIETV----NLHQLNLKAVLDYCY 346
++PG L+ +S D E + P+ G G++ V L + N+ + C
Sbjct: 245 RVTQLPGSCWLARIASQPDNWQGDVEEMILPENGC-GVDLVLLMMQLGKRNINHIWTECG 303
Query: 347 SHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL 399
SH + LLK G L +IV+ + P GSD + TL
Sbjct: 304 SHMAGA--------------LLKAG----LADEIVLYLAPKILGSDAQDLFTL 338
>gi|254226773|ref|ZP_04920347.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51]
gi|125620711|gb|EAZ49071.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V51]
Length = 367
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 175/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ D + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLDADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
SS + + E+ + G +L+L+ +L V V+
Sbjct: 248 ALYQTPSSVLRVASENAELCISAKNG----------KLDLRELLAQLAQQQNVNQVWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|301064689|ref|ZP_07205078.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2]
gi|300441231|gb|EFK05607.1| riboflavin biosynthesis protein RibD [delta proteobacterium NaphS2]
Length = 369
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 195/374 (52%), Gaps = 31/374 (8%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
+K+D +M+ V+ A K +G TSPNP VG VIVK+G++V GFH +AG PHAEV A R
Sbjct: 2 EKNDTHFMKLAVKEARKGLGRTSPNPAVGAVIVKEGRVVASGFHKQAGMPHAEVEAFRKV 61
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
G A GAT YV+LEPCNH+G+TPPCTE ++K+ VK+VVVGM DPNP+V G + L G
Sbjct: 62 GNRAPGATLYVTLEPCNHHGKTPPCTELILKSGVKRVVVGMRDPNPLVTGGGCDYLEKKG 121
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGY 249
++V G+ ++ C RLNEAF I TG+PF + ++++G +S +
Sbjct: 122 LEVVTGILEDECIRLNEAFTKFITTGRPFVIAKSAITLDGWTATSAHHSQWITNEKSRHF 181
Query: 250 YSQLLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPIRIPGLSEESS 306
+L DA+++ + + A + P RI+ +N +P + +S+
Sbjct: 182 VHRLRDRVDAVLMGIGTVLADDPAMTARLGAKKGKDPTRIVVDTNFRTPAGAKVMKHDST 241
Query: 307 SKVIVFTDGEIT-VEPDMGT--KGIETV----NLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
+ I+ T E PD G KG+ET+ +L+L ++D S+LV+
Sbjct: 242 APTIIATSVEGNRSRPDRGKHPKGVETLVCPKQGDKLDLNWLMDKLGEMSITSILVE--- 298
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD------GGNPHTLLNSLGKRLILKNL 412
M+L I L+ K V + P + G D G P T+ +SLG LK+
Sbjct: 299 ---GGSMILGAMIRAQLIDKFYVFIAPKILGGGDGIPMAAGAGPKTMDDSLG----LKDT 351
Query: 413 QPKMSSQSIVLEGY 426
+ +++ GY
Sbjct: 352 SVRRFGDDVLICGY 365
>gi|424660773|ref|ZP_18098020.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-16]
gi|408050146|gb|EKG85319.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-16]
Length = 367
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 175/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLGVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + G +L+L+ +L H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAKNG----------KLDLRELLAQLAQQHNVNQVWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIMLYLAPKLMGSDG 327
>gi|153803015|ref|ZP_01957601.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3]
gi|124121458|gb|EAY40201.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MZO-3]
Length = 367
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 174/336 (51%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPFVQLKMAASLDGQTALANGQSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPLSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + G +L+L+ +L H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAKNG----------KLDLRELLAQLAQQHNVNQVWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|299115418|emb|CBN75583.1| riboflavin biosynthesis protein [Ectocarpus siliculosus]
Length = 541
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 163/293 (55%), Gaps = 39/293 (13%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DG +MRR +ELA K +G T PNP VGCVI+ K+G +VGEGFHP+AG+PHAEV+A+R AGE
Sbjct: 70 DGAHMRRALELAAKGLGHTRPNPAVGCVILDKEGSVVGEGFHPRAGEPHAEVWAIRQAGE 129
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A G TAYVSLEPCNH+GRTPPCT AL++ V +VV GM+DP+P GL RL DAGID
Sbjct: 130 RARGGTAYVSLEPCNHFGRTPPCTTALLECGVARVVAGMVDPDPRTAGSGLRRLADAGID 189
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTL-SVNGHVLDQLGEGVAESGGYYSQL- 253
V+VGVE C LN AF+HR+ + L L + Q G A GG
Sbjct: 190 VSVGVEGAACHALNSAFVHRVSHKSCYGVLHCCLDGACSRSIPQSGS-RAGVGGLQDTAR 248
Query: 254 ------------LQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITV---SNHASPI 296
+EYDAI++ S K + ++ P A R++ V S+ I
Sbjct: 249 ENDLAVPPGGRNFEEYDAIVVEGRSGVAKLEACNSALPPTA---LRVVIVGAGSDEGLEI 305
Query: 297 RIPG-----LSEESSSKVIVFT--------DGEIT--VEPDMGTKGIETVNLH 334
+ G L EES + +VF DG +T V + ++GI V+
Sbjct: 306 ELAGVLESRLLEESPERTVVFMPATAGQDGDGSLTGSVRASLMSRGIAVVDFR 358
>gi|262376969|ref|ZP_06070195.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145]
gi|262308007|gb|EEY89144.1| riboflavin biosynthesis protein RibD [Acinetobacter lwoffii SH145]
Length = 362
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 127/184 (69%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MRR +ELA + ST PNP VGCVIVKDG ++GEGFHP+AGQPHAEVFALR AGE
Sbjct: 7 DQVWMRRAIELARQGQYSTKPNPNVGCVIVKDGIVIGEGFHPQAGQPHAEVFALRQAGEQ 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC HYGRTPPC + L++A V KVVV DPNP+V KG++ L+DA I+V
Sbjct: 67 ARGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVVVACPDPNPLVAGKGVQILKDAEIEV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ ++ +LN+ F+ + TG P+ L+ S++G GE +G Q +Q
Sbjct: 127 EIGICEDEAHQLNQGFLKAMATGMPYMRLKIASSLDGRTAMASGESKWITGLAARQDVQH 186
Query: 257 YDAI 260
+ AI
Sbjct: 187 WRAI 190
>gi|255320997|ref|ZP_05362170.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SK82]
gi|262379913|ref|ZP_06073068.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SH164]
gi|255301961|gb|EET81205.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SK82]
gi|262298107|gb|EEY86021.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
SH164]
Length = 362
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 125/184 (67%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYMRR +ELA ST PNP VGCVIVKDG+I+GEG+HP+AGQPHAEVFALR AGE
Sbjct: 8 DYFYMRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQPHAEVFALRQAGEQ 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+ ATAYV+LEPC HYGRTPPC EAL+K ++KKVV+ DPNP+V KG+ L+ AGI+V
Sbjct: 68 AQDATAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGKGIAILKQAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +LN F+ + G P+ L+ S++G GE +G Q +Q
Sbjct: 128 ESGICENEAAQLNCGFLKAMAVGMPYVRLKVASSLDGRTAMASGESKWITGKAARQDVQH 187
Query: 257 YDAI 260
+ AI
Sbjct: 188 WRAI 191
>gi|343508740|ref|ZP_08746052.1| riboflavin-specific deaminase [Vibrio scophthalmi LMG 19158]
gi|342807003|gb|EGU42206.1| riboflavin-specific deaminase [Vibrio scophthalmi LMG 19158]
Length = 368
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 186/347 (53%), Gaps = 38/347 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI +D +IVGEGFH +AG+PHAEV ALR AG+L
Sbjct: 8 DYLMMSRAIKLAQGGIYTTAPNPNVGCVITRDDQIVGEGFHYRAGEPHAEVHALRMAGKL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV KV+ M DPNP V+ +G+ LR+AGI+V
Sbjct: 68 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVSGRGINMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN AFI R+ TG PF L+ S++G G+ + Q +Q
Sbjct: 128 QVGLLEADAQALNPAFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSAQARQDVQA 187
Query: 257 YDA---IILSASST----------KKYSIPASQEP-----DANQPFRIITVSNHASPIRI 298
+ A ILS S T + +P S + + QP R+I + +
Sbjct: 188 FRAQSGAILSTSQTVIEDNASLNVRWDDLPLSIQAHYPAEELRQPVRVILDRQNQLSADL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDY-CYSHGFCSVLVDL 357
L + + ++IV G++ + + Q++L+A + H + V+
Sbjct: 248 K-LFQTAGDRLIVAPGGDVECLLN---------DEQQIDLRATFEMLAKQHNINHIWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L + ++Q L+ ++V+ P GSDG L +LG
Sbjct: 298 GAT------LARSLMQQQLVDEVVLYQAPKLMGSDG---RGLFGALG 335
>gi|407070637|ref|ZP_11101475.1| riboflavin biosynthesis protein RibD [Vibrio cyclitrophicus ZF14]
Length = 359
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 189/346 (54%), Gaps = 43/346 (12%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
M R ++LA + + +T+PNP VGCVIV+ DG+IVGEGFH KAG+PHAEV A+R AG+ A+G
Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQADGQIVGEGFHAKAGEPHAEVHAMRMAGDKAKG 61
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC+HYGRTPPC E LIKA+V KV+ M DPNP V +G++ LRDAGI+V +G
Sbjct: 62 ATAYVTLEPCSHYGRTPPCAEGLIKAQVSKVICAMQDPNPKVAGRGIKILRDAGIEVEIG 121
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA 259
+ ++ LN AFI R+ TG PF L+ S++G + G+ + + +Q Y A
Sbjct: 122 LLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSSEARRDVQNYRA 181
Query: 260 ---IILSASST----------KKYSIPASQ-----EPDANQPFRIITVSNHASPIRIPGL 301
+LS S T + +P+S E + QP R+I + +
Sbjct: 182 KSGAVLSTSQTVIEDNASLNVRWAELPSSTKINYVEDELRQPIRVILDRQNQLHPELKLF 241
Query: 302 SEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLK---AVLDYCYSHGFCSVLVDLR 358
+S V E + + ++GT ++LH L + + +D+ + +
Sbjct: 242 QTPTS----VLRVAETSADIEVGTTDAGQLDLHDLMRQLPASHIDHIWVEAGAT------ 291
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L K IE L+ ++++ + P GSDG L+ +LG
Sbjct: 292 --------LAKSLIEAQLVDELILYLAPKLMGSDG---RGLMGALG 326
>gi|417951321|ref|ZP_12594427.1| riboflavin biosynthesis protein RibD [Vibrio splendidus ATCC 33789]
gi|342804986|gb|EGU40268.1| riboflavin biosynthesis protein RibD [Vibrio splendidus ATCC 33789]
Length = 370
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 189/347 (54%), Gaps = 37/347 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D M R + LA + + +T+PNP VGCVIV+ DG+IVGEGFH KAG+PHAEV A+R AG+
Sbjct: 8 DFQMMSRAIHLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMAGD 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYGRTPPC E LIKA+V KV+ M DPNP V +G++ LRDAGI+
Sbjct: 68 KAKGATVYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIE 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V +G+ ++ LN AFI R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 VEIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSPAARRDVQ 187
Query: 256 EYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIR 297
Y A +LS S T + +P+S E D QP R+I + + +R
Sbjct: 188 NYRAKAGAVLSTSQTVIDDNASLNVRWAELPSSAQAHYAEADVRQPVRVIL--DRQNQLR 245
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDL 357
+S + V+ + +E + T + QL+L ++ ++ + V+
Sbjct: 246 PELKLYQSPTPVLRVAEASADIE-------VGTTDTGQLDLHDLMRQLPANHIDHIWVEA 298
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L K IE L+ ++++ + P GSDG L+ +LG
Sbjct: 299 GAT------LAKSLIEAQLVDELILYLAPKLMGSDG---RGLMGALG 336
>gi|226314399|ref|YP_002774295.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC
100599]
gi|226097349|dbj|BAH45791.1| riboflavin biosynthesis protein RibD [Brevibacillus brevis NBRC
100599]
Length = 368
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 200/356 (56%), Gaps = 29/356 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM +ELA A G TSPNPMVG VIVKDG IVG G H +AG+PHAEV ALR AG
Sbjct: 2 EQDSKYMDLALELARSARGQTSPNPMVGAVIVKDGTIVGMGAHLRAGEPHAEVHALRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC EALI A V++VVV LDPNP+V +G+E LR AG+
Sbjct: 62 EKAQGATVYVTLEPCSHYGKTPPCAEALIAAAVRRVVVATLDPNPLVAGRGMEMLRAAGV 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V VGV +E K LNE F H I T +PF T++ +++G + G AE+
Sbjct: 122 EVAVGVREEEAKALNEVFFHYIQTRRPFVTVKTASTLDGKIASFTGHSRWITGAEARAEV 181
Query: 251 SQLLQEYDAIILSASSTKKYS--IPASQEPD--ANQPFRIITVSNHASPIRIPGLSEESS 306
+L +++DAI++ + + A QE +QP R+I S +P+ + + +
Sbjct: 182 HELRRQHDAILVGVGTILADDPLLTARQEEQRFGSQPVRVILDSQLRTPLD-AHVVQNAD 240
Query: 307 SKVIVFTDGEITVEPD--MGTKGIETVNLH-QLNLKAVLDYCYSHGFCSVLV----DLRG 359
+K +F E + +G++ + + ++ VLD G S+LV ++ G
Sbjct: 241 AKTWIFATDTAPKEKQELLAARGVKVITTAGPIRVEKVLDTLGELGITSLLVEGGQEVNG 300
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEV-LPVWNGSDGGNPH--TLLNSLGKRLILKNL 412
++ ++ +QK+V + L + GS +P +++G+ + L N+
Sbjct: 301 SF----------LQARAIQKVVSHIALKLIGGSSAPSPFGGQGFSTMGEAVQLANV 346
>gi|421623757|ref|ZP_16064639.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC074]
gi|421788659|ref|ZP_16224943.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-82]
gi|421796907|ref|ZP_16232958.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-21]
gi|408692541|gb|EKL38159.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC074]
gi|410397928|gb|EKP50163.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-21]
gi|410401599|gb|EKP53738.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-82]
Length = 361
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +I+GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQIIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|323491728|ref|ZP_08096906.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546]
gi|323314090|gb|EGA67176.1| riboflavin-specific deaminase [Vibrio brasiliensis LMG 20546]
Length = 368
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 180/335 (53%), Gaps = 35/335 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +T+PNP VGCVI +DG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 8 DFKMMSRAIELAKGGIYTTAPNPNVGCVITRDGEIVGEGFHYRAGEPHAEVHALRMAGEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+HYGRTPPC E LIKAKV KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 SVGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVAGRGIQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ ++ LN AFI R+ T PF L+ S++G G+ + Q +Q+
Sbjct: 128 EVGLLEQDAINLNPAFIKRMKTAMPFVQLKMAASLDGQTALANGQSQWITSSKARQDVQK 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
Y A ILS S T + +P S E QP R+I +
Sbjct: 188 YRAQSGAILSTSKTVIDDNASLNVRWDDLPQSVQSHYPEQQLRQPVRVILDRQGLLTPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
+ E ++IV G+ VE + T+ HQ++L+A D H + V+
Sbjct: 248 KLFNTE-GGRLIVAEQGD--VELQLNTE-------HQVDLRATFADLANKHNINHLWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD 392
L I+ +L+ ++V+ + P GSD
Sbjct: 298 GAT------LASSLIKADLVDELVLYLAPKIMGSD 326
>gi|429885228|ref|ZP_19366825.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae PS15]
gi|429228024|gb|EKY33976.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae PS15]
Length = 365
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 174/336 (51%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + KIVGEGFH + G+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEKIVGEGFHFRVGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 245
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + G +L+L+ +L H V V+
Sbjct: 246 ALYQTPSPVLRVASENAELCISAKNG----------KLDLRELLAQLAQQHNVNQVWVEA 295
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 296 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 325
>gi|262170762|ref|ZP_06038440.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus MB-451]
gi|261891838|gb|EEY37824.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus MB-451]
Length = 367
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 175/335 (52%), Gaps = 33/335 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 THGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPQSGQAQYAETDLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + ++ + + G ++LH+L + H V V+
Sbjct: 248 ALYQTPSPVLRVASENADLCISAENG-----KLDLHEL----LAQLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 299 SQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|326791794|ref|YP_004309615.1| riboflavin biosynthesis protein RibD [Clostridium lentocellum DSM
5427]
gi|326542558|gb|ADZ84417.1| riboflavin biosynthesis protein RibD [Clostridium lentocellum DSM
5427]
Length = 363
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 198/366 (54%), Gaps = 28/366 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMR + LA + G SPNP+VG V+VK+G+I+GEG+H G HAEV A++ A + +EG
Sbjct: 5 YMRYALNLAKQGGGKVSPNPLVGAVLVKEGRIIGEGYHEVYGANHAEVNAIKSASQKSEG 64
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPCNHYG+TPPCTE +I+ K+ +VVVGM DPNP+V G++RL DAGI+V VG
Sbjct: 65 ATLYVTLEPCNHYGKTPPCTETIIQNKIMRVVVGMRDPNPLVAGSGIKRLEDAGIEVIVG 124
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ +E C++LNE FI I +PF L+ ++++G + G+ +G QL
Sbjct: 125 ILEEECRKLNEIFIKYITKQEPFVLLKAAMTLDGKIATVAGQSKWITGEASREMVHQLRN 184
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE--ESSSKVIVF 312
Y I++ + K + + P I+ S +RIP S+ +SKVI+
Sbjct: 185 AYSGILVGIGTVIKDDPLLTCRLVSGRNPVIIVV----DSTLRIPMSSKIIGGTSKVIIA 240
Query: 313 TDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSH--GFCSVLVDLRGNYGDLEMLLKE 370
EI +M ++ L +L +K + Y H +++ L G G +L++
Sbjct: 241 AVKEI---EEMAVDKVK--KLEELGVKVLFIEAYKHRVNLKELMIQL-GKLGIDSILIEG 294
Query: 371 GIEQN-------LLQKIVVEVLPVWNGSDGGNPHT--LLNSLGKRLILKNLQPKMSSQSI 421
G E N ++ K+ + P G P + L + + ++NLQ K + I
Sbjct: 295 GAEVNASALEAGIVDKVQFYIAPQIVGGQAKTPVAGRGIADLEESIKVENLQIKRIGEDI 354
Query: 422 VLEGYL 427
+LEGY+
Sbjct: 355 LLEGYI 360
>gi|26522770|dbj|BAC44857.1| pyrimidine deaminase/ pyrimidine reductase [Vibrio fischeri]
Length = 372
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 188/361 (52%), Gaps = 58/361 (16%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M++ + LA + + +T+PNP VGCV+VKDGKIVGEG H KAG+PHAEV ALR AG+
Sbjct: 7 DHLMMQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGEPHAEVHALRQAGKE 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA VKKV+ M+DPNP V +GL L +AGI+
Sbjct: 67 AQGATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNEAGIET 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLL 254
G+ + + LN F+ R+ TGKPF L+ S++G L GV++ + Q +
Sbjct: 127 ASGLLEADARALNPHFLTRMETGKPFVQLKMAASLDGKT--ALKNGVSQWITSKEARQDV 184
Query: 255 QEYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPI 296
Q Y A I S + T + +P S Q+ QP R I HA
Sbjct: 185 QRYRAQSGAIFSTAKTVIDDNASLNVRWSDLPPSIQESYQQAAIRQPMRFILDRQHAL-- 242
Query: 297 RIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLH--------QLNLKAVL-----D 343
+S + GE+ T I T H QLNLK V+ D
Sbjct: 243 --------TSDLKLFQASGEVVTISSQNTHPIVTSENHIQCCVDDDQLNLKEVVNKISRD 294
Query: 344 YCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSL 403
+ +H + L + I++NL+ ++++ + P G+DG +++N +
Sbjct: 295 FNVNHIWVEAGATLAASM----------IKENLVDELIIYLAPKLMGADG---RSIINLI 341
Query: 404 G 404
G
Sbjct: 342 G 342
>gi|343513787|ref|ZP_08750882.1| riboflavin-specific deaminase [Vibrio sp. N418]
gi|342801406|gb|EGU36872.1| riboflavin-specific deaminase [Vibrio sp. N418]
Length = 368
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 182/336 (54%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI +D +IVGEGFH +AG+PHAEV ALR AG+L
Sbjct: 8 DYLMMSRAIKLAQGGIYTTAPNPNVGCVITRDDQIVGEGFHYRAGEPHAEVHALRMAGKL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV KV+ M DPNP V+ +G+ LR+AGI+V
Sbjct: 68 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVSGRGINMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN FI R+ TG PF L+ S++G G+ + Q +Q
Sbjct: 128 QVGLLEADAQALNPTFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSAQARQDVQA 187
Query: 257 YDA---IILSASST----------KKYSIPASQEP-----DANQPFRIITVSNHASPIRI 298
+ A ILS S T + +P S + + QP R+I + +
Sbjct: 188 FRAQSGAILSTSQTVIEDNASLNVRWDDLPLSIQAHYPAEELRQPVRVILDRQNQLSADL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDY-CYSHGFCSVLVDL 357
L + + ++IV G++ + + Q++L+A + H + V+
Sbjct: 248 K-LFQTAGDRLIVAPGGDMECLLN---------DDQQIDLRATFEMLAKQHNINHIWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + ++Q L+ ++V+ + P GSDG
Sbjct: 298 GAT------LARSLMQQQLVDEVVLYLAPKLMGSDG 327
>gi|357040471|ref|ZP_09102258.1| riboflavin biosynthesis protein RibD [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356562|gb|EHG04348.1| riboflavin biosynthesis protein RibD [Desulfotomaculum gibsoniae
DSM 7213]
Length = 370
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 199/380 (52%), Gaps = 50/380 (13%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA +A+G T+PNPMVG V+VKDG +VG G+H +AG PHAEV ALR+AG+L
Sbjct: 5 DQHYMQMALELAARAMGRTTPNPMVGAVVVKDGHVVGRGYHARAGTPHAEVHALREAGDL 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA YV+LEPC H+GRT PCT+A+IKA++ +VV+ M DPNP+V KG+++L +AG+ V
Sbjct: 65 AGGAVLYVTLEPCCHHGRTGPCTDAIIKAQIGRVVLAMTDPNPLVAGKGIQKLTEAGVHV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
GV +E +RLNE FI I T P+ ++ +S++G + GE +G + +
Sbjct: 125 DCGVLEEDARRLNEVFIKYITTRLPYVVMKTAMSLDGKIATAKGESQWITGNAAREFVHR 184
Query: 253 LLQEYDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
L YDAI +L+ + +P E P RII S +P +++ S
Sbjct: 185 LRDRYDAILVGVGTVLADDPSLTTRLP---EGGGKDPVRIILDSKARTPETARVITQSSE 241
Query: 307 SKVIVFTD--------------GEITVEPDMGTKGIET-VNLHQLNLKAVLDYCYSHGFC 351
+ I+ T G +E G GI+ V LH+L + + G
Sbjct: 242 APTIIVTTPGAPPERVRLLREAGARVLEVTGGEGGIDLGVLLHELGRREITGVLVEGG-- 299
Query: 352 SVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG-----GNPHTLLNSLGKR 406
+ G++ I NL+ K+ + P G + G+P + +L
Sbjct: 300 ---ARVNGSF----------ITCNLVDKVNWFIAPKLIGGESAPGPVGDPG--ITALQDA 344
Query: 407 LILKNLQPKMSSQSIVLEGY 426
L +K+++ + I +EGY
Sbjct: 345 LPIKDIKLHRYGEDICVEGY 364
>gi|410583363|ref|ZP_11320469.1| riboflavin biosynthesis protein RibD [Thermaerobacter subterraneus
DSM 13965]
gi|410506183|gb|EKP95692.1| riboflavin biosynthesis protein RibD [Thermaerobacter subterraneus
DSM 13965]
Length = 443
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 187/352 (53%), Gaps = 23/352 (6%)
Query: 52 SLTSTRKCRGGYRIRCGQVQ--NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDG 109
++ +R GG G+ + + + D +MRR ++LA +A G T PNPMVG VIV+DG
Sbjct: 13 TILPSRASAGGAAPVAGRARLAVDREADRHFMRRALDLAARAGGRTHPNPMVGAVIVRDG 72
Query: 110 KIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKK 169
+VGEG+H +AG+PHAEV ALR A + A GAT YV+LEPC H+GRTPPCTEA++ A +++
Sbjct: 73 VVVGEGYHRRAGEPHAEVEALRSARDQARGATLYVTLEPCCHHGRTPPCTEAILAAGLRR 132
Query: 170 VVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTL 229
VVV M+DP+P V +GL L AG++V VGVE + RLNEA++ V G+P T +Y +
Sbjct: 133 VVVAMVDPDPRVAGRGLSVLAQAGVEVAVGVEADRALRLNEAYVVHRVLGRPMVTAKYAM 192
Query: 230 SVNGHVLDQLGEGVAESGG----YYSQLLQEYDAIILSASS--TKKYSIPASQEPDANQP 283
+++G + GE +G + +L DAI++ + S+ P P
Sbjct: 193 TLDGRIATARGESRWITGPRARRWVHRLRDRVDAILVGVGTVLADDPSLTVRWHPGGRDP 252
Query: 284 FRIITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLD 343
R+I S+ +P + S + + V P + T L ++ +
Sbjct: 253 VRVILDSHARTPPDAQVIRAARHSPAPTW----VAVTPQ--APAVRTARLEAAGVQVLRV 306
Query: 344 YCYSHGFCSVLVDLR--GNYGDLEMLLKEG-------IEQNLLQKIVVEVLP 386
HG S+L LR + G + +L++ G L+ ++V + P
Sbjct: 307 PADPHGRVSILHLLRELASRGIVHLLVEGGASVHGSFFAAGLVDRVVAFIAP 358
>gi|84394363|ref|ZP_00993084.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus
12B01]
gi|84375022|gb|EAP91948.1| Pyrimidine reductase, riboflavin biosynthesis [Vibrio splendidus
12B01]
Length = 364
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 190/343 (55%), Gaps = 37/343 (10%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
M R ++LA + + +T+PNP VGCVIV+ DG+IVGEGFH KAG+PHAEV A+R AG+ A+G
Sbjct: 2 MSRAIQLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMAGDKAKG 61
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC+HYGRTPPC E LIKA+V KV+ M DPNP V +G++ LRDAGI+V +G
Sbjct: 62 ATAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIEVEIG 121
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA 259
+ ++ LN AFI R+ TG PF L+ S++G + G+ + + +Q Y A
Sbjct: 122 LLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSPEARRDVQNYRA 181
Query: 260 ---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRIPGL 301
+LS S T + +P+S E + QP R+I + + +R
Sbjct: 182 KSGAVLSTSQTVIDDNASLNVRWAELPSSIKDHYAEDELRQPIRVIL--DRQNQLRPELK 239
Query: 302 SEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNY 361
++ + V+ + +E + T QL+L ++ ++ + V+
Sbjct: 240 LFQTPTSVLRVAEASADIE-------VGTTEAGQLDLHDLMRQLPANHIDHIWVEAGAT- 291
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L K IE L+ ++++ + P GSDG L+ +LG
Sbjct: 292 -----LAKSLIEAQLVDELILYLAPKLMGSDG---RGLMGALG 326
>gi|392960516|ref|ZP_10325984.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans DSM
17108]
gi|421054727|ref|ZP_15517692.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans B4]
gi|421061737|ref|ZP_15524012.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans B3]
gi|421063787|ref|ZP_15525733.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans A12]
gi|421071590|ref|ZP_15532706.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans A11]
gi|392440408|gb|EIW18088.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans B4]
gi|392446855|gb|EIW24126.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans A11]
gi|392447580|gb|EIW24814.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans B3]
gi|392455093|gb|EIW31900.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans DSM
17108]
gi|392462357|gb|EIW38452.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans A12]
Length = 376
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 183/332 (55%), Gaps = 18/332 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM + + LA A G TSPNPMVG VIV+DG++VGEG+H KAG PHAE+ AL+ AG+L
Sbjct: 2 DEKYMGQALALAQYAKGRTSPNPMVGAVIVRDGRVVGEGWHRKAGTPHAEINALQQAGDL 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A A+ YV+LEPC+H+GRT PC EALI A +KKV++ M DPNP+V +G+ RLR+AGI+V
Sbjct: 62 AYDASIYVTLEPCSHHGRTGPCVEALIAAGIKKVIIAMTDPNPLVAGQGISRLREAGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
GV + +LNE FI I T KPF L+ +S++G + G AES Y Q
Sbjct: 122 VEGVLAKEAAKLNETFIKWISTKKPFVLLKSAMSLDGKIASYTGHSKWITGAESRIYVHQ 181
Query: 253 LLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L YDAI++ + ++ P R++ S +PI +++ + +I
Sbjct: 182 LRDTYDAILVGIGTVLADNPTLTTRLTYQGKNPIRVVVDSMARTPIHSNVVTDGLARTMI 241
Query: 311 VFTDGEITVEPD-MGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
TD + D + G+E + + +NL + + S+L++ G +
Sbjct: 242 AVTDKAPQEKIDTLRACGVEVIECEKTTAGVNLSHLFNILGEQQITSILIE-GGAAINAS 300
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP 396
+L E NL+ KI + P + G+D P
Sbjct: 301 VL-----EDNLVDKINWFIAPKIVGGADAPGP 327
>gi|227824644|ref|ZP_03989476.1| riboflavin biosynthesis protein ribD [Acidaminococcus sp. D21]
gi|352683758|ref|YP_004895742.1| riboflavin biosynthesis protein ribD [Acidaminococcus intestini
RyC-MR95]
gi|226905143|gb|EEH91061.1| riboflavin biosynthesis protein ribD [Acidaminococcus sp. D21]
gi|350278412|gb|AEQ21602.1| riboflavin biosynthesis protein ribD [Acidaminococcus intestini
RyC-MR95]
Length = 366
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 152/249 (61%), Gaps = 18/249 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM+ ++LA KA G+TSPNP+VGCVIV DG +VG+G+H KAG+PHAE+ A+ DAGE
Sbjct: 3 DEEYMQMALDLAEKARGATSPNPLVGCVIVSPDGHVVGKGYHHKAGEPHAEINAMDDAGE 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
GATAYV+LEPC+HYGRT PC EALIKA +KKVV DPNP V+ +G RL +AG++
Sbjct: 63 KTAGATAYVTLEPCSHYGRTGPCCEALIKAGIKKVVAAATDPNPRVSGRGFRRLEEAGVE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYS 251
V GV + R NE F+H + TG+PF L+Y ++++G + G+ +G Y
Sbjct: 123 VVSGVLADKAYRQNEIFMHYMKTGRPFVALKYAMTLDGKIATVSGDSKWITGVKARTYAH 182
Query: 252 QLLQEYDAIILSASSTKKYSIPASQEP-------DANQPFRIITVSNHASPIRIPGLSEE 304
+L YDAI++ + A +P + P RII S + P+ ++
Sbjct: 183 RLRSWYDAILVGRETV------AQDDPSLTVRLVEGKNPLRIILDSKASLPLERKVFTDG 236
Query: 305 SSSKVIVFT 313
++ ++V T
Sbjct: 237 AADTLLVVT 245
>gi|197335179|ref|YP_002155463.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11]
gi|197316669|gb|ACH66116.1| riboflavin biosynthesis protein RibD [Vibrio fischeri MJ11]
Length = 363
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 189/357 (52%), Gaps = 58/357 (16%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M++ + LA + + +T+PNP VGCV+VKDGKIVGEG H KAG+PHAEV ALR AG+ A+GA
Sbjct: 2 MQKAILLAKQGIYTTAPNPNVGCVLVKDGKIVGEGAHLKAGEPHAEVHALRQAGKEAQGA 61
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC E LIKA VKKV+ M+DPNP V +GL L +AGI+ G+
Sbjct: 62 TAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNEAGIETASGL 121
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLLQEYD 258
+ + LN F+ R+ TGKPF L+ S++G L GV++ + Q +Q Y
Sbjct: 122 LEADARALNPHFLTRMETGKPFVQLKMAASLDGKT--ALKNGVSQWITSKEARQDVQRYR 179
Query: 259 A---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRIPG 300
A ILS + T + +P S Q+ QP R I HA
Sbjct: 180 AQSGAILSTAKTVIDDNASLNVRWSDLPPSIQESYQQAAIRQPMRFILDRQHAL------ 233
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIET--------VNLHQLNLKAVL-----DYCYS 347
+S + GE+ T I T V+ QLNLK V+ D+ +
Sbjct: 234 ----TSDLKLFQASGEVVTISSQNTHPIVTSENHIQCCVDDEQLNLKEVVNKISRDFNVN 289
Query: 348 HGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
H + L + I++NL+ ++++ + P G+DG +++N +G
Sbjct: 290 HIWVEAGATLAASM----------IKENLVDELIIYLAPKLMGADG---RSIINLIG 333
>gi|445453451|ref|ZP_21445123.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-A-92]
gi|444753427|gb|ELW78077.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-A-92]
Length = 361
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+K++VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKSQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|424744811|ref|ZP_18173094.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-141]
gi|422942591|gb|EKU37638.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-141]
Length = 361
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR A
Sbjct: 5 KKDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAA 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L+DAGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKDAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V VG+ ++L ++LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEVGICEDLAEKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|424057279|ref|ZP_17794796.1| riboflavin biosynthesis protein RibD [Acinetobacter nosocomialis
Ab22222]
gi|407440812|gb|EKF47329.1| riboflavin biosynthesis protein RibD [Acinetobacter nosocomialis
Ab22222]
Length = 361
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|416047285|ref|ZP_11575985.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|347994201|gb|EGY35506.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
Length = 374
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 145/235 (61%), Gaps = 20/235 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L +A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCSHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA----------------SQEPDANQPFRIITVSNH 292
Y A ILS S T P+ +QE + QP R+I S H
Sbjct: 189 YRAKASAILSTSQTVLADDPSLNVRWAELPNETQARYAQE-NLRQPVRVILDSTH 242
>gi|260772212|ref|ZP_05881128.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio metschnikovii CIP 69.14]
gi|260611351|gb|EEX36554.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio metschnikovii CIP 69.14]
Length = 369
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 186/355 (52%), Gaps = 43/355 (12%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N D M R ++LA + +T+PNP VGCVI + G+IVGEGFH +AGQPHAEV ALR
Sbjct: 4 NFSAVDYQMMARAIQLAQRGRFTTAPNPKVGCVITQQGRIVGEGFHYRAGQPHAEVHALR 63
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
A E A GATAYV+LEPC+HYGRTPPC E LI+A V KV+ M DPNP V+ +G+ LR+
Sbjct: 64 MAKEYARGATAYVTLEPCSHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVSGRGIAMLRE 123
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
AGI+V VG+ + K LN AFI R+ TG P+ L+ S++G GE +
Sbjct: 124 AGIEVEVGLLEADAKVLNPAFIKRMQTGMPYVQLKLAASLDGQTALANGESQWITSAQAR 183
Query: 252 QLLQEYDA---IILSASST----------KKYSIPA---SQEPDAN--QPFRIITVSNHA 293
Q +Q Y A +LS S T + +PA Q P A QP R+I H
Sbjct: 184 QDVQVYRAQAGAVLSTSQTVIADNASLAVRWSELPADVQQQYPHAELRQPTRVILDRQHQ 243
Query: 294 SPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLH-QLNLKAVLDYCYSHGFCS 352
+ + S + D E+ V +N H QL+L+ L S
Sbjct: 244 LHQSLALYATTSPIIRVAEQDAELCV----------PLNEHQQLDLRDTL--------AS 285
Query: 353 VLVDLRGNYGDLE---MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
+ + N+ +E L K +EQ L+ ++++ + P GSDG LL +LG
Sbjct: 286 LAEQYQINHLWVEAGPTLAKSLLEQQLVDELIIYLAPKIMGSDG---RGLLGALG 337
>gi|424032228|ref|ZP_17771648.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-01]
gi|424042788|ref|ZP_17780462.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-02]
gi|408876233|gb|EKM15362.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-01]
gi|408887210|gb|EKM25835.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-02]
Length = 374
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 187/344 (54%), Gaps = 40/344 (11%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG AEGA
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGNKAEGA 77
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G + LRDAG+DV VG+
Sbjct: 78 TAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVDVQVGL 137
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAI 260
+ LN+ FI + TG P+ L+ S++G G+ + Q +Q Y A+
Sbjct: 138 LESDAIELNKGFIKFMQTGMPYVQLKMAASLDGQSALNNGQSQWITSPKARQDVQRYRAL 197
Query: 261 ---ILSASST----------KKYSIPAS---QEP--DANQPFRII--TVSNHASPIRIPG 300
ILS S T + +P S Q P + QP R+I S + ++
Sbjct: 198 SGAILSTSKTVIDDNASLNVRWDDLPCSVQAQYPQDEVRQPPRVIFDRQSQLSDDLK--- 254
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
L ++IV DG+I P++ G Q++L A L S + L G
Sbjct: 255 LFNTDGERIIVSHDGDIA--PELTENG-------QIDLTATLKAVASEYHINHLWVEAG- 304
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 305 ----ATLASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|258515514|ref|YP_003191736.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans
DSM 771]
gi|257779219|gb|ACV63113.1| riboflavin biosynthesis protein RibD [Desulfotomaculum acetoxidans
DSM 771]
Length = 367
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 196/371 (52%), Gaps = 27/371 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ ++LA +A G TSPNPMVG VIVK+G +VG G+H KAG PHAE+ AL++AGE
Sbjct: 2 DEQYMKMALDLAARARGRTSPNPMVGSVIVKNGAVVGRGYHKKAGTPHAEIHALKEAGEA 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H+GRT PCTEA++ A +K+ VV M DPNP+V KGL+ LR AG++V
Sbjct: 62 ARGATIYVTLEPCCHHGRTGPCTEAILSAGIKRAVVAMTDPNPLVAGKGLDILRKAGVEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
G+ E +LNE FI + TG PF L+ +S++G + G +G Y
Sbjct: 122 VSGLLAEEAAKLNEVFIKYVSTGMPFVLLKTAMSLDGKIAAYTGHSRWITGSASRAYVHH 181
Query: 253 LLQEYDAIIL--------SASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEE 304
L YDAI++ + S T + S P P R+I S +P L++
Sbjct: 182 LRDSYDAILIGIGTLMADNPSLTARLSCP-EDGVKGKDPVRVIVDSLARTPPEAKVLTQI 240
Query: 305 SSSKVIVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
S++ I+ E G + I N +++L + + S+L++ G
Sbjct: 241 SAAPTIIAITAAAPEERVQKLVAAGAQIIIAGNGPKIDLPYLFKSLTAIDITSILIE-GG 299
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKM 416
+ +L EQ L K++ + P + G + P + ++ + L+L+ + +
Sbjct: 300 AAVNASVL-----EQKLADKLLWFIAPKIIGGKEAPGPVGGRGVAAVSEALLLERISVQR 354
Query: 417 SSQSIVLEGYL 427
+ I LEGYL
Sbjct: 355 FEEDICLEGYL 365
>gi|417545272|ref|ZP_12196358.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC032]
gi|421667527|ref|ZP_16107596.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC087]
gi|421672108|ref|ZP_16112071.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC099]
gi|400383160|gb|EJP41838.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC032]
gi|410380187|gb|EKP32776.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC099]
gi|410384395|gb|EKP36905.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC087]
Length = 361
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|332290249|ref|YP_004421101.1| hypothetical protein UMN179_02191 [Gallibacterium anatis UMN179]
gi|330433145|gb|AEC18204.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
Length = 372
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/257 (42%), Positives = 155/257 (60%), Gaps = 20/257 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +M +ELA K + +PNP VGCV+VK+G+IVG+G+H KAG+PHAEV A+R+AG
Sbjct: 8 QQDHQFMALAIELAKKGRFTCTPNPAVGCVLVKNGEIVGKGYHEKAGEPHAEVMAMREAG 67
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A GATAYV+LEPC+HYGRTPPC + LI+A VK+VV M DPNP V +GL+ L DAGI
Sbjct: 68 EKANGATAYVTLEPCSHYGRTPPCAKGLIEAGVKRVVAAMQDPNPQVAGRGLKMLADAGI 127
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+ VG+ + ++LN+ F+ R+ TG P+ L+ +S++G GE +G Q +
Sbjct: 128 ETAVGLLQQQAEQLNKGFLKRMRTGFPYVQLKMAISIDGRTAMANGESQWITGEAARQDV 187
Query: 255 QEYDAI---ILSASST-----KKYSIPASQEP----------DANQPFRIITVSNHASPI 296
Q+Y A+ ILS+S T ++ Q P QP R+I S H I
Sbjct: 188 QQYRAMASAILSSSKTVLTDNAALNVRWQQLPLEVQSIYPQEKLRQPLRVILDSQHQ--I 245
Query: 297 RIPGLSEESSSKVIVFT 313
G ES S +++ +
Sbjct: 246 EPKGRLFESESPILLVS 262
>gi|445429989|ref|ZP_21438380.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC021]
gi|444761027|gb|ELW85454.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC021]
Length = 361
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|170717790|ref|YP_001784854.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336]
gi|168825919|gb|ACA31290.1| riboflavin biosynthesis protein RibD [Haemophilus somnus 2336]
Length = 376
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 144/234 (61%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D ++M+ ++LA K + +T+PNP VGCV+VK+G+IVG GFH KAGQPHAEV ALRDAG+
Sbjct: 9 DEYFMQIALDLAKKGIFTTTPNPAVGCVLVKNGEIVGRGFHFKAGQPHAEVMALRDAGDR 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC + LI+A ++ V+V M DPNP V KGL L+ AGI+
Sbjct: 69 AKGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGLAMLQAAGIES 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN+ F+ R+ T KPF L+ +S++G GE SG Q +Q+
Sbjct: 129 AVGLLQEKAELLNKGFLTRMRTQKPFVILKMAISLDGRTAMANGESKWISGEQARQDVQQ 188
Query: 257 YDAIILSASSTKK--------YSIPASQEP----------DANQPFRIITVSNH 292
A + + ST K ++ Q P D QP RII H
Sbjct: 189 ERAKVSAILSTAKTVLADDPLLNLRWEQFPSELQQNYKVEDVRQPVRIILDRQH 242
>gi|113461193|ref|YP_719262.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Haemophilus somnus 129PT]
gi|112823236|gb|ABI25325.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Haemophilus
somnus 129PT]
Length = 376
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 133/194 (68%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D ++M+ +ELA K + +T+PNP VGCV+VK+G+IVG GFH KAGQPHAEV ALRDAG+
Sbjct: 8 QDEYFMQIALELAKKGIFTTTPNPAVGCVLVKNGEIVGRGFHFKAGQPHAEVMALRDAGD 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GATAYV+LEPC+H+GRTPPC + LI+A ++ V+V M DPNP V KGL L+ AGI+
Sbjct: 68 RAKGATAYVTLEPCSHFGRTPPCAQGLIEAGIRNVIVAMKDPNPQVAGKGLAMLQAAGIE 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
VG+ E + LN+ F+ R+ T KPF L+ +S++G GE SG Q +Q
Sbjct: 128 SAVGLLQEKAELLNKGFLTRMRTQKPFVILKMAISLDGRTAMANGESKWISGEQARQDVQ 187
Query: 256 EYDAIILSASSTKK 269
+ A + + ST K
Sbjct: 188 QERAKVSAILSTAK 201
>gi|416054265|ref|ZP_11579136.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416070103|ref|ZP_11583546.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|444334408|ref|ZP_21149962.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|347999308|gb|EGY40151.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348003609|gb|EGY44182.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|443550439|gb|ELT58738.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 374
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 145/235 (61%), Gaps = 20/235 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L +A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCSHFGRTPPCAKGLAEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA----------------SQEPDANQPFRIITVSNH 292
Y A ILS S T P+ +QE + QP R+I S H
Sbjct: 189 YRAKASAILSTSQTVLADDPSLNVRWAELPNETQARYAQE-NLRQPVRVILDSTH 242
>gi|421673405|ref|ZP_16113345.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC065]
gi|421689791|ref|ZP_16129465.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-116]
gi|404565697|gb|EKA70861.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-116]
gi|410386266|gb|EKP38739.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC065]
Length = 361
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +I+GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQIIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEFGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|147678096|ref|YP_001212311.1| pyrimidine reductase and pyrimidine deaminase [Pelotomaculum
thermopropionicum SI]
gi|146274193|dbj|BAF59942.1| pyrimidine reductase and Pyrimidine deaminase [Pelotomaculum
thermopropionicum SI]
Length = 376
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 198/370 (53%), Gaps = 27/370 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +YM +ELA +A G TSPNPMVG V+VK+G +VG+G+H KAG PHAE+ AL++AG
Sbjct: 2 DDRYYMNMALELAARARGRTSPNPMVGAVLVKNGVVVGQGYHMKAGTPHAEIIALKEAGN 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GAT YV+LEPC HYGRT PC +A+I+A V +VV M DPNP+V GL+++++AG++
Sbjct: 62 EARGATLYVNLEPCCHYGRTGPCADAVIEAGVARVVAAMADPNPLVAGGGLKKIKEAGLE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYS 251
VT+GV ++ + LNEAFI + T +PF + LS++G + + G +G Y
Sbjct: 122 VTLGVMEDEARELNEAFIKYVTTRRPFVLAKAALSLDGKIAARTGRSKWITGPAARAYVH 181
Query: 252 QLLQEYDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
QL YDAI IL+ + +P D P R+I S +P+ + ++S
Sbjct: 182 QLRDWYDAILVGIGTILADDPSLTARLPGGGGRD---PVRVILDSLARTPLNARVIKQKS 238
Query: 306 SSKVIVFTD-----GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
+ ++ G + + G + + + +++L ++ SVL++
Sbjct: 239 KAPTVIAVTAGAPPGRVKALQEAGAQVVVVNSGPRVDLPELMRILAEKEITSVLIE---- 294
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMS 417
G E + ++ K+ + P + G D P ++ G L L+ ++
Sbjct: 295 -GGAE-VHGSAFAAGIVDKVAWFIAPKIIGGRDAPGPVGGEGVDDPGGALELERIKVSRL 352
Query: 418 SQSIVLEGYL 427
Q I +EGY+
Sbjct: 353 DQDICIEGYV 362
>gi|416073967|ref|ZP_11584383.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444344155|ref|ZP_21152452.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348007027|gb|EGY47373.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443544671|gb|ELT54616.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 374
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L++A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPASQ---------------EPDANQPFRIITVSNH 292
Y A +LS S T P+ + + QP R+I S H
Sbjct: 189 YRAKASAMLSTSQTVLADDPSLNVRWAELPNETQARYVQENLRQPVRVILDSTH 242
>gi|365967570|ref|YP_004949132.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|416089017|ref|ZP_11587862.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|444349221|ref|ZP_21156720.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|348009444|gb|EGY49592.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|365746483|gb|AEW77388.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443545175|gb|ELT55023.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 374
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L++A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPASQ---------------EPDANQPFRIITVSNH 292
Y A +LS S T P+ + + QP R+I S H
Sbjct: 189 YRAKASAMLSTSQTVLADDPSLNVRWAELPNETQARYIQENLRQPVRVILDSTH 242
>gi|416102894|ref|ZP_11589006.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444346719|ref|ZP_21154683.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|348008478|gb|EGY48750.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|443541537|gb|ELT51964.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 374
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L++A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPASQ---------------EPDANQPFRIITVSNH 292
Y A +LS S T P+ + + QP R+I S H
Sbjct: 189 YRAKASAMLSTSQTVLADDPSLNVHWAELPNETQARYVQENLRQPVRVILDSTH 242
>gi|421627323|ref|ZP_16068133.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC098]
gi|408693005|gb|EKL38617.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC098]
Length = 361
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|169797510|ref|YP_001715303.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter baumannii AYE]
gi|213155676|ref|YP_002317721.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AB0057]
gi|215484945|ref|YP_002327186.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AB307-0294]
gi|301346214|ref|ZP_07226955.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AB056]
gi|301512963|ref|ZP_07238200.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AB058]
gi|301595094|ref|ZP_07240102.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AB059]
gi|332851510|ref|ZP_08433507.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
6013150]
gi|332866790|ref|ZP_08437194.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
6013113]
gi|417575408|ref|ZP_12226261.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Canada BC-5]
gi|421641469|ref|ZP_16082008.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-235]
gi|421647057|ref|ZP_16087488.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-251]
gi|421657530|ref|ZP_16097787.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-83]
gi|421699964|ref|ZP_16139484.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-58]
gi|421799244|ref|ZP_16235239.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Canada BC1]
gi|421806484|ref|ZP_16242347.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC035]
gi|169150437|emb|CAM88334.1| bifunctional protein [Includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase) ] [Acinetobacter baumannii AYE]
gi|213054836|gb|ACJ39738.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AB0057]
gi|213986529|gb|ACJ56828.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AB307-0294]
gi|332729963|gb|EGJ61294.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
6013150]
gi|332734398|gb|EGJ65518.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
6013113]
gi|400206141|gb|EJO37121.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Canada BC-5]
gi|404571094|gb|EKA76159.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-58]
gi|408515133|gb|EKK16725.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-235]
gi|408516851|gb|EKK18410.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-251]
gi|408712131|gb|EKL57318.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-83]
gi|410410197|gb|EKP62113.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Canada BC1]
gi|410417664|gb|EKP69433.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC035]
Length = 361
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|261867792|ref|YP_003255714.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415768374|ref|ZP_11483676.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|261413124|gb|ACX82495.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348657943|gb|EGY75521.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-2]
Length = 374
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L++A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPASQ---------------EPDANQPFRIITVSNH 292
Y A +LS S T P+ + + QP R+I S H
Sbjct: 189 YRAKASAMLSTSQTVLADDPSLNVRWAELPNETQARYVQENLRQPVRVILDSTH 242
>gi|445487788|ref|ZP_21458003.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AA-014]
gi|444768206|gb|ELW92425.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
AA-014]
Length = 361
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|332799789|ref|YP_004461288.1| riboflavin biosynthesis protein RibD [Tepidanaerobacter
acetatoxydans Re1]
gi|438003051|ref|YP_007272794.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Tepidanaerobacter acetatoxydans Re1]
gi|332697524|gb|AEE91981.1| riboflavin biosynthesis protein RibD [Tepidanaerobacter
acetatoxydans Re1]
gi|432179845|emb|CCP26818.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Tepidanaerobacter acetatoxydans Re1]
Length = 361
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 183/330 (55%), Gaps = 24/330 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D ++M+R +ELA K +T NPMVG VIVKDGKIVGEG+H KAG PHAE+ AL++AG
Sbjct: 4 DEYFMQRALELAEKGRKTTGENPMVGAVIVKDGKIVGEGYHKKAGGPHAEIEALKEAGLN 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC HYG+TPPCTEALIKA++ +VV + DPN V KG +L++AGI+V
Sbjct: 64 AKGATIYVNLEPCCHYGKTPPCTEALIKAQIARVVAAIEDPNSKVAGKGFSQLQNAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG------VAESGGYY 250
+VGV +LNE FI I PF + SV+G + G+ A G+
Sbjct: 124 SVGVLKNKASKLNEVFIKNISEQTPFVIAKIAQSVDGKIALSSGKSKWITCDAARKKGH- 182
Query: 251 SQLLQEYDAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
++ YDAI++ + + +A P +I+ S+ PI L + K
Sbjct: 183 -EIRSMYDAILVGIGTVLADDPILDCRLANNAANPVKIVLDSSAVIPIESKLL--QGKGK 239
Query: 309 VIVFT-----DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
VI+ T G + +MG I T + +++NL +L Y+ G S+LV+ G
Sbjct: 240 VILATTAQADKGRLQKLEEMGADIIMT-SQNKVNLNELLKALYNSGIYSILVE--GGAKV 296
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L EG LL K++V + P G DG
Sbjct: 297 FTSFLIEG----LLDKLIVFLSPKIIGGDG 322
>gi|260556402|ref|ZP_05828621.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|260410457|gb|EEX03756.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|452954128|gb|EME59532.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
MSP4-16]
Length = 361
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|255747035|ref|ZP_05420980.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholera CIRS 101]
gi|262161421|ref|ZP_06030531.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae INDRE 91/1]
gi|379742074|ref|YP_005334043.1| riboflavin biosynthesis protein RibD [Vibrio cholerae IEC224]
gi|417814297|ref|ZP_12460950.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-49A2]
gi|417818034|ref|ZP_12464663.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HCUF01]
gi|418338888|ref|ZP_12947782.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-23A1]
gi|418346812|ref|ZP_12951570.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-28A1]
gi|418356058|ref|ZP_12958777.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A1]
gi|421318514|ref|ZP_15769082.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1032(5)]
gi|421329486|ref|ZP_15779996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1042(15)]
gi|421333442|ref|ZP_15783919.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1046(19)]
gi|421336984|ref|ZP_15787445.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1048(21)]
gi|421340412|ref|ZP_15790844.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-20A2]
gi|421347907|ref|ZP_15798284.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46A1]
gi|422897367|ref|ZP_16934811.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-40A1]
gi|422903565|ref|ZP_16938535.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48A1]
gi|422926498|ref|ZP_16959511.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-38A1]
gi|423145820|ref|ZP_17133414.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-19A1]
gi|423150496|ref|ZP_17137810.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-21A1]
gi|424003248|ref|ZP_17746323.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A2]
gi|424025019|ref|ZP_17764669.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62B1]
gi|424595837|ref|ZP_18035156.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1040(13)]
gi|424599750|ref|ZP_18038928.1| riboflavin biosynthesis protein RibD [Vibrio Cholerae CP1044(17)]
gi|424645798|ref|ZP_18083533.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A2]
gi|443515915|ref|ZP_21082425.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-68A1]
gi|443519709|ref|ZP_21086102.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-71A1]
gi|443532194|ref|ZP_21098208.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-7A1]
gi|443539535|ref|ZP_21105389.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A1]
gi|449055273|ref|ZP_21733941.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae
O1 str. Inaba G4222]
gi|255735437|gb|EET90837.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholera CIRS 101]
gi|262028732|gb|EEY47386.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae INDRE 91/1]
gi|340036783|gb|EGQ97759.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-49A2]
gi|340037757|gb|EGQ98732.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HCUF01]
gi|341620505|gb|EGS46276.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48A1]
gi|341621250|gb|EGS46997.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-40A1]
gi|341645888|gb|EGS70012.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-38A1]
gi|356417818|gb|EHH71431.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-21A1]
gi|356422658|gb|EHH76132.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-19A1]
gi|356430530|gb|EHH83739.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-23A1]
gi|356431796|gb|EHH84996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-28A1]
gi|356452556|gb|EHI05235.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A1]
gi|378795584|gb|AFC59055.1| riboflavin biosynthesis protein RibD [Vibrio cholerae IEC224]
gi|395916772|gb|EJH27602.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1032(5)]
gi|395928020|gb|EJH38783.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1042(15)]
gi|395928844|gb|EJH39597.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1046(19)]
gi|395932083|gb|EJH42827.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1048(21)]
gi|395939695|gb|EJH50377.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-20A2]
gi|395942486|gb|EJH53162.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-46A1]
gi|395958336|gb|EJH68832.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A2]
gi|408031206|gb|EKG67843.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1040(13)]
gi|408041107|gb|EKG77247.1| riboflavin biosynthesis protein RibD [Vibrio Cholerae CP1044(17)]
gi|408845782|gb|EKL85897.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A2]
gi|408869874|gb|EKM09161.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62B1]
gi|443442852|gb|ELS96155.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-68A1]
gi|443446708|gb|ELT03367.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-71A1]
gi|443457584|gb|ELT24981.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-7A1]
gi|443465635|gb|ELT40295.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A1]
gi|448265315|gb|EMB02550.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio cholerae
O1 str. Inaba G4222]
Length = 365
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 139/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
+ A ILS S T + Y +P+S E D QP R+I H
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQH 239
>gi|415754797|ref|ZP_11480731.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348656134|gb|EGY71537.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 374
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 142/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC H+GRTPPC + L +A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
Y A ILS S T P+ E + QP R+I S H
Sbjct: 189 YRAKASAILSTSQTVLADDPSLNVRWAELPNETQARYAEENLRQPVRVILDSTH 242
>gi|417554381|ref|ZP_12205450.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-81]
gi|417559862|ref|ZP_12210741.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC137]
gi|421201202|ref|ZP_15658361.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC109]
gi|421634807|ref|ZP_16075418.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-13]
gi|421802551|ref|ZP_16238500.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-A-694]
gi|395522444|gb|EJG10533.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC137]
gi|395563234|gb|EJG24887.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC109]
gi|400390798|gb|EJP57845.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-81]
gi|408703830|gb|EKL49212.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-13]
gi|410414744|gb|EKP66540.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-A-694]
Length = 361
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|148976617|ref|ZP_01813304.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3]
gi|145963968|gb|EDK29226.1| riboflavin-specific deaminase [Vibrionales bacterium SWAT-3]
Length = 367
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 191/350 (54%), Gaps = 43/350 (12%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D M R + LA + + +T+PNP VGCVIV+ DG+IVGEGFH KAG+PHAEV A+R AG+
Sbjct: 8 DFQMMSRAIHLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEPHAEVHAMRMAGD 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYGRTPPC E LIKA+V KV+ M DPNP V +G++ LRDAGI+
Sbjct: 68 KAKGATVYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDAGIE 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V +G+ ++ LN AFI R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 VEIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSPAARRDVQ 187
Query: 256 EYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIR 297
Y A +LS S T + +P+S E + QP R+I + + +R
Sbjct: 188 NYRAKAGAVLSTSQTVIDDNASLNVRWAELPSSAQAHYAEANVRQPVRVIL--DRQNQLR 245
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAV---LDYCYSHGFCSVL 354
P L + S V E + + ++GT ++LH+L + +D+ + +
Sbjct: 246 -PEL-KLYQSPTPVLRVAEASADIEIGTTETGQLDLHELMCQLPANHIDHIWVEAGAT-- 301
Query: 355 VDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L K IE L+ ++++ + P GSDG L+ +LG
Sbjct: 302 ------------LAKSLIEAQLVDELILYLAPKLMGSDG---RGLMGALG 336
>gi|384187377|ref|YP_005573273.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
thuringiensis serovar chinensis CT-43]
gi|410675695|ref|YP_006928066.1| riboflavin biosynthesis protein RibD [Bacillus thuringiensis Bt407]
gi|452199747|ref|YP_007479828.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|326941086|gb|AEA16982.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
thuringiensis serovar chinensis CT-43]
gi|409174824|gb|AFV19129.1| riboflavin biosynthesis protein RibD [Bacillus thuringiensis Bt407]
gi|452105140|gb|AGG02080.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 365
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 182/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+HYGRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GATIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P RII S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT + + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAKKKKALENAGVKVFVTSGEKHINLHEILDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 299 ----ASFIENKLMNKLILYVAP 316
>gi|406916315|gb|EKD55337.1| hypothetical protein ACD_60C00014G0011 [uncultured bacterium]
Length = 354
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 133/195 (68%), Gaps = 4/195 (2%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YM + LA + S SPNPMVGCVIVK+ KI+G+G+H +AG+PHAE+ ALRDAG+
Sbjct: 2 NDAHYMSLALNLAEQGRFSVSPNPMVGCVIVKNNKIIGQGYHQRAGEPHAEILALRDAGD 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GATAYV+LEPC H GRTPPC AL+ A +KK+ V +DPNP+V KG+ LR AGID
Sbjct: 62 AAKGATAYVTLEPCCHQGRTPPCRNALLSAGIKKIYVASIDPNPLVAGKGIHLLRAAGID 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG----HVLDQLGEGVAESGGYYS 251
V G+ ++ K+LNE F H I+ +PF ++ +S++G + LD ++ +
Sbjct: 122 VEAGLLEKKAKQLNEIFFHYIIHKRPFVIAKWAMSLDGKTCVNTLDSKQISGIKANAHTH 181
Query: 252 QLLQEYDAIILSASS 266
QL +E DAI++ A++
Sbjct: 182 QLRREVDAILVGANT 196
>gi|193076093|gb|ABO10696.2| hypothetical protein A1S_0221 [Acinetobacter baumannii ATCC 17978]
Length = 361
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|417567326|ref|ZP_12218198.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC143]
gi|395552998|gb|EJG19006.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC143]
Length = 361
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|229528728|ref|ZP_04418118.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae 12129(1)]
gi|229332502|gb|EEN97988.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae 12129(1)]
Length = 367
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 175/346 (50%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + Y +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + G + + H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAEHGKL---------DLRELLALLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L + IEQ L+ +I++ + P GSDG L +LG
Sbjct: 299 SQ------LAQSLIEQKLVDEIILYLAPKLMGSDG---RGLFGALG 335
>gi|417548337|ref|ZP_12199418.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-18]
gi|400388636|gb|EJP51708.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-18]
Length = 361
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|28897453|ref|NP_797058.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD
2210633]
gi|260366283|ref|ZP_05778739.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
K5030]
gi|260876413|ref|ZP_05888768.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AN-5034]
gi|260898684|ref|ZP_05907180.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
Peru-466]
gi|28805665|dbj|BAC58942.1| riboflavin-specific deaminase [Vibrio parahaemolyticus RIMD
2210633]
gi|308086936|gb|EFO36631.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
Peru-466]
gi|308092982|gb|EFO42677.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AN-5034]
gi|308112701|gb|EFO50241.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
K5030]
Length = 374
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 186/346 (53%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG I+GEG+H +AG+PHAEV+A+R AG+
Sbjct: 14 DFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVYAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G++ LR+AG++V
Sbjct: 74 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRIITVSNHASPIRI 298
Y A ILS S T + +P S + + QP R+I +
Sbjct: 194 YRAQSGGILSTSKTVLDDNASLNVRWDDLPQSVQAHYELTEVRQPARVILDRQQKLSDDL 253
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S E ++IV ++G++ + D K T L + + +++ + ++ L
Sbjct: 254 KLFSTE-GERIIVSSEGDVCPQLDQSGKIDLTATLKAVVTQHNINHLWVEAGATLASSL- 311
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 312 -------------IKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|184156566|ref|YP_001844905.1| pyrimidine deaminase [Acinetobacter baumannii ACICU]
gi|332874950|ref|ZP_08442801.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
6014059]
gi|384130233|ref|YP_005512845.1| ribD [Acinetobacter baumannii 1656-2]
gi|384141519|ref|YP_005524229.1| pyrimidine deaminase [Acinetobacter baumannii MDR-ZJ06]
gi|385235833|ref|YP_005797172.1| pyrimidine deaminase [Acinetobacter baumannii TCDC-AB0715]
gi|387125521|ref|YP_006291403.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
MDR-TJ]
gi|407931172|ref|YP_006846815.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
TYTH-1]
gi|417570814|ref|ZP_12221671.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC189]
gi|417576940|ref|ZP_12227785.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-17]
gi|417870878|ref|ZP_12515825.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH1]
gi|417875534|ref|ZP_12520342.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH2]
gi|417879971|ref|ZP_12524518.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH3]
gi|417880643|ref|ZP_12525116.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH4]
gi|421204046|ref|ZP_15661176.1| pyrimidine deaminase [Acinetobacter baumannii AC12]
gi|421536321|ref|ZP_15982569.1| pyrimidine deaminase [Acinetobacter baumannii AC30]
gi|421628806|ref|ZP_16069570.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC180]
gi|421687633|ref|ZP_16127353.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-143]
gi|421701968|ref|ZP_16141453.1| ribD [Acinetobacter baumannii ZWS1122]
gi|421705707|ref|ZP_16145128.1| ribD [Acinetobacter baumannii ZWS1219]
gi|421794215|ref|ZP_16230319.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-2]
gi|424054011|ref|ZP_17791542.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Ab11111]
gi|424064946|ref|ZP_17802430.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Ab44444]
gi|425754678|ref|ZP_18872535.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-113]
gi|445462870|ref|ZP_21449145.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC338]
gi|445477615|ref|ZP_21454393.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-78]
gi|183208160|gb|ACC55558.1| Pyrimidine deaminase [Acinetobacter baumannii ACICU]
gi|322506453|gb|ADX01907.1| ribD [Acinetobacter baumannii 1656-2]
gi|323516332|gb|ADX90713.1| pyrimidine deaminase [Acinetobacter baumannii TCDC-AB0715]
gi|332736893|gb|EGJ67869.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
6014059]
gi|342225234|gb|EGT90234.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH2]
gi|342226547|gb|EGT91511.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH1]
gi|342226917|gb|EGT91869.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH3]
gi|342239621|gb|EGU04016.1| pyrimidine deaminase [Acinetobacter baumannii ABNIH4]
gi|347592012|gb|AEP04733.1| pyrimidine deaminase [Acinetobacter baumannii MDR-ZJ06]
gi|385880013|gb|AFI97108.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
MDR-TJ]
gi|395551262|gb|EJG17271.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC189]
gi|395570161|gb|EJG30823.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-17]
gi|398326428|gb|EJN42576.1| pyrimidine deaminase [Acinetobacter baumannii AC12]
gi|404564249|gb|EKA69431.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-143]
gi|404667497|gb|EKB35418.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Ab11111]
gi|404673029|gb|EKB40833.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Ab44444]
gi|407194731|gb|EKE65867.1| ribD [Acinetobacter baumannii ZWS1122]
gi|407195120|gb|EKE66254.1| ribD [Acinetobacter baumannii ZWS1219]
gi|407899753|gb|AFU36584.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
TYTH-1]
gi|408705455|gb|EKL50796.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC180]
gi|409985720|gb|EKO41925.1| pyrimidine deaminase [Acinetobacter baumannii AC30]
gi|410395010|gb|EKP47328.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-2]
gi|425496572|gb|EKU62698.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-113]
gi|444776118|gb|ELX00169.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-78]
gi|444780567|gb|ELX04512.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC338]
Length = 361
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|260899221|ref|ZP_05907616.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AQ4037]
gi|308106651|gb|EFO44191.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AQ4037]
Length = 374
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 186/346 (53%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG I+GEG+H +AG+PHAEV+A+R AG+
Sbjct: 14 DFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVYAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G++ LR+AG++V
Sbjct: 74 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRIITVSNHASPIRI 298
Y A ILS S T + +P S + + QP R+I +
Sbjct: 194 YRAQSGGILSTSKTVLDDNASLNVRWDDLPQSVQAHYELTEVRQPARVILDRQQKLSDDL 253
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S E ++IV ++G++ + D K T L + + +++ + ++ L
Sbjct: 254 KLFSTE-GERIIVSSEGDVCPQLDQSGKIDVTATLKAVVTQHNINHLWVEAGATLASSL- 311
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 312 -------------IKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|258620986|ref|ZP_05716020.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM573]
gi|424807482|ref|ZP_18232890.1| riboflavin biosynthesis protein RibD [Vibrio mimicus SX-4]
gi|258586374|gb|EEW11089.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
mimicus VM573]
gi|342325424|gb|EGU21204.1| riboflavin biosynthesis protein RibD [Vibrio mimicus SX-4]
Length = 367
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 175/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 QIGLLEADARALNSGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPQSVQTQYAETDLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + ++ + + G +L+L+ +L H V V+
Sbjct: 248 ALYQTPSPVLRVASENADLCISAENG----------KLDLRELLAQLAQQHNVNQVWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|15642269|ref|NP_231902.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121586201|ref|ZP_01675992.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80]
gi|153820478|ref|ZP_01973145.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457]
gi|153823263|ref|ZP_01975930.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33]
gi|227082395|ref|YP_002810946.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2]
gi|229507656|ref|ZP_04397161.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae BX 330286]
gi|229512149|ref|ZP_04401628.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae B33]
gi|229519284|ref|ZP_04408727.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC9]
gi|229607160|ref|YP_002877808.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae MJ-1236]
gi|254849400|ref|ZP_05238750.1| riboflavin-specific deaminase [Vibrio cholerae MO10]
gi|298500355|ref|ZP_07010160.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757]
gi|360036146|ref|YP_004937909.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O1 str.
2010EL-1786]
gi|418335279|ref|ZP_12944190.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-06A1]
gi|418350574|ref|ZP_12955305.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43A1]
gi|419827228|ref|ZP_14350727.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1033(6)]
gi|421322026|ref|ZP_15772579.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1038(11)]
gi|421325828|ref|ZP_15776352.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1041(14)]
gi|422907450|ref|ZP_16942248.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-70A1]
gi|422914294|ref|ZP_16948799.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HFU-02]
gi|423154315|ref|ZP_17141496.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-22A1]
gi|423157398|ref|ZP_17144491.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-32A1]
gi|423160969|ref|ZP_17147909.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-33A2]
gi|423165796|ref|ZP_17152520.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48B2]
gi|423731818|ref|ZP_17705121.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A1]
gi|423769101|ref|ZP_17713239.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A2]
gi|423895963|ref|ZP_17727442.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62A1]
gi|423931495|ref|ZP_17731835.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-77A1]
gi|424007039|ref|ZP_17750009.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-37A1]
gi|424027905|ref|ZP_17767507.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-69A1]
gi|424587185|ref|ZP_18026763.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1030(3)]
gi|424602511|ref|ZP_18041651.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1047(20)]
gi|424607444|ref|ZP_18046385.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1050(23)]
gi|424611262|ref|ZP_18050101.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-39A1]
gi|424614077|ref|ZP_18052862.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41A1]
gi|424618051|ref|ZP_18056722.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-42A1]
gi|424622835|ref|ZP_18061340.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-47A1]
gi|424653569|ref|ZP_18090949.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A2]
gi|424657388|ref|ZP_18094673.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A2]
gi|440710509|ref|ZP_20891157.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae 4260B]
gi|443504616|ref|ZP_21071572.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-64A1]
gi|443508517|ref|ZP_21075278.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-65A1]
gi|443512361|ref|ZP_21078996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-67A1]
gi|443524600|ref|ZP_21090810.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-72A2]
gi|443536002|ref|ZP_21101873.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-80A1]
gi|9656833|gb|AAF95415.1| riboflavin-specific deaminase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549613|gb|EAX59637.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 2740-80]
gi|126508979|gb|EAZ71573.1| riboflavin biosynthesis protein RibD [Vibrio cholerae NCTC 8457]
gi|126519224|gb|EAZ76447.1| riboflavin biosynthesis protein RibD [Vibrio cholerae B33]
gi|227010283|gb|ACP06495.1| riboflavin biosynthesis protein RibD [Vibrio cholerae M66-2]
gi|229343973|gb|EEO08948.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC9]
gi|229352114|gb|EEO17055.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae B33]
gi|229355161|gb|EEO20082.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae BX 330286]
gi|229369815|gb|ACQ60238.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae MJ-1236]
gi|254845105|gb|EET23519.1| riboflavin-specific deaminase [Vibrio cholerae MO10]
gi|297541048|gb|EFH77102.1| riboflavin biosynthesis protein RibD [Vibrio cholerae MAK 757]
gi|341620641|gb|EGS46408.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-70A1]
gi|341636536|gb|EGS61231.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HFU-02]
gi|356416655|gb|EHH70280.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-06A1]
gi|356428007|gb|EHH81238.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-22A1]
gi|356439288|gb|EHH92275.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-32A1]
gi|356444246|gb|EHH97058.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-33A2]
gi|356445070|gb|EHH97879.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-43A1]
gi|356450297|gb|EHI03027.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-48B2]
gi|356647300|gb|AET27355.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O1 str.
2010EL-1786]
gi|395917666|gb|EJH28494.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1041(14)]
gi|395919020|gb|EJH29844.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1038(11)]
gi|395958746|gb|EJH69217.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A2]
gi|395961426|gb|EJH71754.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-42A1]
gi|395970374|gb|EJH80145.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-47A1]
gi|395972533|gb|EJH82123.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1030(3)]
gi|395975189|gb|EJH84686.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1047(20)]
gi|408006613|gb|EKG44751.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-39A1]
gi|408011690|gb|EKG49495.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-41A1]
gi|408042435|gb|EKG78487.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1050(23)]
gi|408052509|gb|EKG87548.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-81A2]
gi|408608018|gb|EKK81421.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1033(6)]
gi|408622750|gb|EKK95720.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-17A1]
gi|408633378|gb|EKL05739.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A2]
gi|408653722|gb|EKL24877.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-77A1]
gi|408654665|gb|EKL25800.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-62A1]
gi|408844893|gb|EKL85016.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-37A1]
gi|408878528|gb|EKM17529.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-69A1]
gi|439973838|gb|ELP50042.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae 4260B]
gi|443431087|gb|ELS73641.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-64A1]
gi|443434925|gb|ELS81071.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-65A1]
gi|443438749|gb|ELS88467.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-67A1]
gi|443449458|gb|ELT09752.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-72A2]
gi|443460892|gb|ELT31972.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-80A1]
Length = 367
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 139/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
+ A ILS S T + Y +P+S E D QP R+I H
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQH 241
>gi|410667743|ref|YP_006920114.1| riboflavin biosynthesis protein RibD [Thermacetogenium phaeum DSM
12270]
gi|409105490|gb|AFV11615.1| riboflavin biosynthesis protein RibD [Thermacetogenium phaeum DSM
12270]
Length = 382
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 203/372 (54%), Gaps = 40/372 (10%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
+M R +ELA G TSPNPMVG V+V+D I+GEG+H KAG PHAEV ALR AG+LA+G
Sbjct: 12 FMSRALELAALGKGKTSPNPMVGAVVVRDDVIIGEGYHMKAGTPHAEVHALRAAGDLAKG 71
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+T YV+LEPC HYG+TPPCTEA+IKA ++KVV+ DPNP+V KG+ L++AGI+V VG
Sbjct: 72 STLYVTLEPCCHYGKTPPCTEAIIKAGIQKVVIATCDPNPLVAGKGIRSLKEAGIEVQVG 131
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQLLQ 255
+ +E +RLNEAF I TG P+ L+ +S++G + G+ +G L
Sbjct: 132 IMEEEAQRLNEAFFKYIRTGLPYVVLKVAMSLDGKIATCSGDSKWITGEKARLKVQHLRA 191
Query: 256 EYDAIILSASST-KKYSIPASQEPD-ANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
E DA+++ + + + PD + +P R+I S+ P+ + + V+V
Sbjct: 192 ESDAVMVGIGTVLADDPLLTVRLPDESKRPLRVIVDSSLHLPVDSRLVQTAGEAPVVVAA 251
Query: 314 -------DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSV--LVDLRGNYGDL 364
D ++ +E +G+E VLD S+ L+ G G +
Sbjct: 252 VPGKYQKDKKLLLE----KRGVE-----------VLDMPGEDDMVSIEELLQELGRRGVM 296
Query: 365 EMLLKEG-------IEQNLLQKIVVEVLPVWNG---SDGGNPHTLLNSLGKRLILKNLQP 414
+LL+ G ++ +++ K V + P+ G + G + ++L K L L++L+
Sbjct: 297 TLLLEGGATLNASALQADIVDKFVFFLSPLIIGGKNAPGAFGGSGFDTLDKALRLESLKI 356
Query: 415 KMSSQSIVLEGY 426
+ + ++ GY
Sbjct: 357 ERVGEDFLISGY 368
>gi|239502078|ref|ZP_04661388.1| pyrimidine deaminase [Acinetobacter baumannii AB900]
gi|421680454|ref|ZP_16120308.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC111]
gi|410389369|gb|EKP41783.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC111]
Length = 361
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L +AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILENAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|261211387|ref|ZP_05925675.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC341]
gi|260839342|gb|EEX65968.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC341]
Length = 367
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 175/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LI+A V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIQAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSSAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPPSVQAQYAEADLRQPLRVILDRQHQLYPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + ++ + + G +L+L+ +L H V V+
Sbjct: 248 ALYQTPSPVLRVASENADLRISAENG----------KLDLRELLTQLAQQHNVNQVWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQQLVDEIILYLAPKLMGSDG 327
>gi|409422473|ref|ZP_11259570.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. HYS]
Length = 376
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 118/165 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV+DG++VGEG+H +AG+PHAEV+ALR AGEL
Sbjct: 9 DAHYMARAIELARKGLYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVYALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL+RL DAGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLKRLADAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
GV + + LN F+ R+ G PF + +S++G GE
Sbjct: 129 ASGVLEAEARTLNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGE 173
>gi|375264655|ref|YP_005022098.1| riboflavin-specific deaminase [Vibrio sp. EJY3]
gi|369839979|gb|AEX21123.1| riboflavin-specific deaminase [Vibrio sp. EJY3]
Length = 372
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 182/352 (51%), Gaps = 48/352 (13%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR A
Sbjct: 14 DFSMMSRAIRLAKRGIYTTAPNPNVGCVIVRDGQIVGEGYHLRAGEPHAEVHALRMAEGK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+H+GRTPPC E LIKAKV +VV M DPNP V +G++ LRDAGI+V
Sbjct: 74 AEGATAYVTLEPCSHHGRTPPCAEGLIKAKVARVVCAMQDPNPKVAGRGIQMLRDAGIEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLESDALELNRGFIKFMQTGMPFIQLKMAASLDGQTALSNGQSQWITSPRARQDVQR 193
Query: 257 YDAI---ILSASSTK--------------KYSIPASQEPDA-NQPFRIITVSNHASPIRI 298
Y A+ ILS S T +I +P+A QP RII +
Sbjct: 194 YRAMSGGILSTSKTVIDDNASLNVRWDDLPQTIREQYQPEAVRQPVRII-LDRQCQLTDE 252
Query: 299 PGLSEESSSKVIVFTDGEITVE------PDMGTKGIETVNLHQLNLKAVLDYCYSHGFCS 352
L ++IV DG+I + D+ T N HQ+N + + +
Sbjct: 253 LKLFNTDGERIIVSQDGDIAPQLNEDGQIDLATTLKAVANQHQVN------HLWVEAGAT 306
Query: 353 VLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
+ L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 307 LASAL--------------IQANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|384425233|ref|YP_005634591.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae LMA3984-4]
gi|327484786|gb|AEA79193.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
cholerae LMA3984-4]
Length = 365
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 175/346 (50%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARVLNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + Y +P+S E D QP R+I H +
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 245
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + G + + H V V+
Sbjct: 246 ALYQTPSPVLRVASENAELCISAEHGKL---------DLRELLALLAQQHNVNQVWVEAG 296
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L + IEQ L+ +I++ + P GSDG L +LG
Sbjct: 297 SQ------LAQSLIEQKLVDEIILYLAPKLMGSDG---RGLFGALG 333
>gi|262166346|ref|ZP_06034083.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus VM223]
gi|262026062|gb|EEY44730.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio mimicus VM223]
Length = 367
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 175/336 (52%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 QIGLLEADARALNSGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPQSVQTQYAETDLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + ++ + + G +L+L+ +L H V V+
Sbjct: 248 SLYQTPSPVLRVASENADLCISAENG----------KLDLRELLAQLAQQHNVNQVWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|262168270|ref|ZP_06035967.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC27]
gi|262023162|gb|EEY41866.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae RC27]
Length = 365
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 139/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
+ A ILS S T + Y +P+S E D QP R+I H
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQH 239
>gi|301054889|ref|YP_003793100.1| riboflavin biosynthesis protein ribD [Bacillus cereus biovar
anthracis str. CI]
gi|300377058|gb|ADK05962.1| riboflavin biosynthesis protein ribD [Bacillus cereus biovar
anthracis str. CI]
Length = 367
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 182/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFITIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G CS+L++ G
Sbjct: 241 WIFTTNNHAAEKKKALENAGVKVFVTSGEKHINLYEMLDVLGQKGICSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ P
Sbjct: 299 ----ASFIENELMDKLILYFAP 316
>gi|387120051|ref|YP_006285934.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|416032844|ref|ZP_11572950.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|429732269|ref|ZP_19266884.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans Y4]
gi|347999491|gb|EGY40317.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|385874543|gb|AFI86102.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429156512|gb|EKX99142.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans Y4]
Length = 374
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/235 (45%), Positives = 144/235 (61%), Gaps = 20/235 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VK+GKIVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DVAFMQLALDLAKQGEFTTTPNPSVGCVLVKNGKIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC H+GRTPPC + L +A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 ARGATAYVTLEPCFHFGRTPPCAKGLAEAGVSKVIAAMYDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E ++LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLEEKAEQLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA----------------SQEPDANQPFRIITVSNH 292
Y A ILS S T P+ +QE + QP R+I S H
Sbjct: 189 YRAKASAILSTSQTVLADDPSLNVRWAELPNETQARYAQE-NLRQPVRVILDSTH 242
>gi|121729759|ref|ZP_01682198.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52]
gi|147673692|ref|YP_001217785.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|227118717|ref|YP_002820613.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|421351989|ref|ZP_15802354.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-25]
gi|121628510|gb|EAX60996.1| riboflavin biosynthesis protein RibD [Vibrio cholerae V52]
gi|146315575|gb|ABQ20114.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|227014167|gb|ACP10377.1| riboflavin biosynthesis protein RibD [Vibrio cholerae O395]
gi|395952434|gb|EJH63048.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-25]
Length = 367
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 139/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
+ A ILS S T + Y +P+S E D QP R+I H
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQH 241
>gi|372271364|ref|ZP_09507412.1| riboflavin biosynthesis protein RibD [Marinobacterium stanieri S30]
Length = 381
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 170/304 (55%), Gaps = 27/304 (8%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M R ++LA + + +T+PNP VGCVIVKDG+++GEG H KAG+PHAEV ALR AGE
Sbjct: 8 DDHRWMARALQLAEQGLYTTNPNPRVGCVIVKDGELIGEGAHLKAGEPHAEVHALRMAGE 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A G AYV+LEPC+H+G+TPPC EAL+KA V +VV M DPNP+V +GL RL+D GID
Sbjct: 68 QARGGAAYVTLEPCSHHGKTPPCAEALVKAGVGRVVAAMQDPNPLVAGRGLARLQDVGID 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---Q 252
G+ + + LN FI R+ G+P+ L+ S++G Q GE +G Q
Sbjct: 128 TAHGLLESQARALNPGFISRMERGRPYVRLKLASSLDGRTAMQSGESQWITGAAARSDVQ 187
Query: 253 LLQEYDAIILSASST-----KKYSIPASQ--EPDA-------NQPFRIITVSNHASPIRI 298
L+ + +L+ T ++ A+Q PDA QP R++ S P
Sbjct: 188 RLRARSSAVLTGVDTVLMDNASLTVRAAQLGLPDAEAERAAERQPLRVVLDSQLRLPAST 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPD---MGTKGIETVNL----HQLNLKAVLDYCYSHGFC 351
LS S+ V ++ +P + G + ++L +++L A+L + H C
Sbjct: 248 AMLSLPGSTLVAT---AQLDNQPSAIALSASGAQVLSLPGADGRVDLSALLSWLAQHAQC 304
Query: 352 SVLV 355
+ L+
Sbjct: 305 NELL 308
>gi|387929359|ref|ZP_10132036.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus PB1]
gi|387586177|gb|EIJ78501.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus PB1]
Length = 371
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 172/290 (59%), Gaps = 17/290 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM+ + +A AVG TSPNP VG V+VK+G+I+G G H KAG PHAEV A+R AGE A G
Sbjct: 6 YMKLALSMARAAVGQTSPNPSVGAVVVKNGEILGMGAHLKAGTPHAEVHAIRTAGENARG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A YV+LEPC+HYG+TPPCTE +I A +K+VVV LDPNP+V G+++LR AGI+V VG
Sbjct: 66 ADLYVTLEPCSHYGKTPPCTELIISAGIKRVVVATLDPNPLVAGSGIKQLRQAGIEVEVG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQ 255
V E +NE F H I TGKPF TL+ ++++G + G+ ++ QL
Sbjct: 126 VGKEEADNINEPFFHYIQTGKPFVTLKAAVTLDGKTAAKTGDSKWITSTQARSDVHQLRH 185
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQ-PFRIITVSNHASPIRIP---GLSEESSSKVI 310
E+DAI++ + K + ++ P + P RII + H +RIP + ++ ++K I
Sbjct: 186 EHDAILVGIQTVLKDNPLLTTRLPRGGKNPIRII-LDTH---LRIPLDANVIKDKTAKTI 241
Query: 311 VFTDGEITVEP--DMGTKGIETVNLH--QLNLKAVLDYCYSHGFCSVLVD 356
+ T E+ + + G E V L ++++ +L SVLV+
Sbjct: 242 IITGNELDQQKAGKLQELGAEVVPLSTGRIDINELLTVLGKRRIMSVLVE 291
>gi|319942892|ref|ZP_08017175.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC
51599]
gi|319743434|gb|EFV95838.1| riboflavin biosynthesis protein RibD [Lautropia mirabilis ATCC
51599]
Length = 385
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 144/231 (62%), Gaps = 11/231 (4%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+DD M+R ++LA + V +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV AL+ AG
Sbjct: 4 EDDRRAMQRAIDLAWQGVNTTMPNPRVGCVIVRDGEVVGEGWHRRAGEPHAEVLALQQAG 63
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A GATAYV+LEPC+H+GRT PC + L++A V +VV M DPNP+VN +GL RLR AGI
Sbjct: 64 ERARGATAYVTLEPCSHHGRTGPCADRLVEAGVARVVAAMEDPNPLVNGQGLGRLRAAGI 123
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
DV G+ +E + LNE FI R+ G+P+ L+ S++G + GE E+
Sbjct: 124 DVRCGLLEEEARALNEGFISRMQRGRPWVRLKAATSLDGFIALPDGESQWITGEAARTDG 183
Query: 252 QLLQEYDAIILSASSTKKYSIPA---SQEPDANQPFRIIT-----VSNHAS 294
+ + IL+ S T + PA QP R++ VS HA+
Sbjct: 184 HAWRARASAILTGSGTVQADNPALTVRHVATERQPVRVLVDARLQVSEHAA 234
>gi|424061449|ref|ZP_17798939.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Ab33333]
gi|404666588|gb|EKB34531.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Ab33333]
Length = 361
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 135/186 (72%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQVIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L +AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILENAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|422911108|ref|ZP_16945736.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-09]
gi|341632480|gb|EGS57346.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-09]
Length = 367
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 174/336 (51%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R A EL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAAEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + E+ + G +L+L+ +L H + V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAKNG----------KLDLRELLAQLAQQHNVNQLWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|262280656|ref|ZP_06058439.1| pyrimidine deaminase [Acinetobacter calcoaceticus RUH2202]
gi|262257556|gb|EEY76291.1| pyrimidine deaminase [Acinetobacter calcoaceticus RUH2202]
Length = 361
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR A
Sbjct: 5 KKDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAA 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V VG+ ++L ++LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEVGICEDLAEKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGAVARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|153828188|ref|ZP_01980855.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39]
gi|229522216|ref|ZP_04411633.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TM 11079-80]
gi|148876277|gb|EDL74412.1| riboflavin biosynthesis protein RibD [Vibrio cholerae 623-39]
gi|229341141|gb|EEO06146.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae TM 11079-80]
Length = 367
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 171/335 (51%), Gaps = 33/335 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + G + + H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAEHGKL---------DLRELLALLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K IEQ L+ +I++ + P GSDG
Sbjct: 299 SQ------LAKSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|421662422|ref|ZP_16102587.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC110]
gi|421696055|ref|ZP_16135649.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-692]
gi|404563640|gb|EKA68841.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-692]
gi|408714762|gb|EKL59895.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC110]
Length = 361
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSPARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|422308210|ref|ZP_16395363.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1035(8)]
gi|408618075|gb|EKK91164.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1035(8)]
Length = 365
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 139/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
+ A ILS S T + Y +P+S E D QP R+I H
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQH 239
>gi|425743199|ref|ZP_18861290.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-487]
gi|425484351|gb|EKU50756.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-487]
Length = 361
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 135/186 (72%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLVAQLNRGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|415885142|ref|ZP_11547070.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus MGA3]
gi|387590811|gb|EIJ83130.1| riboflavin biosynthesis protein RibD [Bacillus methanolicus MGA3]
Length = 371
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 174/293 (59%), Gaps = 17/293 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ + +A AVG TSPNP VG V+VK+G+I+G G H KAG PHAEV A+R AGE
Sbjct: 3 DHEYMKLALSMARAAVGQTSPNPSVGAVVVKNGEILGMGAHLKAGTPHAEVHAIRTAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA YV+LEPC+HYG+TPPCTE +I + +K+VVV LDPNP+V G+++LR AGI+V
Sbjct: 63 ARGADLYVTLEPCSHYGKTPPCTELIISSGIKRVVVATLDPNPLVAGTGVKQLRQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQ 252
VGV ++NE F H I TGKP+ TL+ ++++G + G+ A++ Q
Sbjct: 123 EVGVGKNEADQINEPFFHYIQTGKPYVTLKAAVTLDGKTATKTGDSKWITSAQARSDVHQ 182
Query: 253 LLQEYDAIILSASST-KKYSIPASQEPDANQ-PFRIITVSNHASPIRIP---GLSEESSS 307
L E+DAI++ + + ++ P + P RII + H +RIP + ++ ++
Sbjct: 183 LRHEHDAILVGIQTVLNDNPLLTTRLPRGGKNPIRII-LDTH---LRIPLDANVIKDKTA 238
Query: 308 KVIVFTDGEITVEP--DMGTKGIETVNLH--QLNLKAVLDYCYSHGFCSVLVD 356
K IV T E + ++ G+E V L Q+++ +L SVLV+
Sbjct: 239 KTIVITGNEFDRQKADNLHELGVEVVPLSTAQIDINELLTVLGKRQIMSVLVE 291
>gi|334340276|ref|YP_004545256.1| riboflavin biosynthesis protein RibD [Desulfotomaculum ruminis DSM
2154]
gi|334091630|gb|AEG59970.1| riboflavin biosynthesis protein RibD [Desulfotomaculum ruminis DSM
2154]
Length = 377
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 151/256 (58%), Gaps = 17/256 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA +A G TSPNP+VG VIVK+G+++G+GFH KAG HAEV AL +AGE
Sbjct: 6 DSHYMQMALELAARARGRTSPNPLVGAVIVKEGQVIGKGFHAKAGGAHAEVVALMEAGEQ 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A AT YV+LEPC HYGRT PCTEA+IKA +K+VV M DPNP+V KGLE L+ AG++V
Sbjct: 66 ARDATLYVTLEPCCHYGRTGPCTEAVIKAGIKRVVAAMTDPNPLVAGKGLEVLKKAGVEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG------VAESGGYY 250
GV ++ LNEAFI I T +PF L+ S++G + GE A G++
Sbjct: 126 KAGVLEQEAMHLNEAFIKYITTKRPFVILKSATSLDGKIATAGGESQWITGKAAREQGHW 185
Query: 251 SQLLQEYDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEE 304
L DAI IL+ + +P + D P RI+ S +P L +E
Sbjct: 186 --LRDRVDAILVGVNTILADDPSLTTRLPEGRGKD---PVRIVVDSLARTPTAAKVLLQE 240
Query: 305 SSSKVIVFTDGEITVE 320
S++ ++ T VE
Sbjct: 241 SAAHTMIATTEAAPVE 256
>gi|375136752|ref|YP_004997402.1| bifunctional protein ribD [Acinetobacter calcoaceticus PHEA-2]
gi|325124197|gb|ADY83720.1| bifunctional protein ribD [Acinetobacter calcoaceticus PHEA-2]
Length = 361
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++G+GFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V VG+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEVGICEDLASKLNQGFLKAMSTGIPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|343500592|ref|ZP_08738482.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
tubiashii ATCC 19109]
gi|418477325|ref|ZP_13046458.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342819954|gb|EGU54785.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
tubiashii ATCC 19109]
gi|384575065|gb|EIF05519.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 368
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 179/336 (53%), Gaps = 43/336 (12%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T+PNP VGCVIV + +IVGEGFH +AG+PHAEV A+R AGE GA
Sbjct: 12 MSRAIDLAKGGIYTTAPNPNVGCVIVNNDQIVGEGFHFRAGEPHAEVHAMRMAGEKTIGA 71
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC E LIKAKV KV+ M DPNP+V +G++ LRDAGI V VG+
Sbjct: 72 TAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPVVAGRGIKMLRDAGIKVEVGL 131
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAI 260
++ LN AFI ++ TG PF L+ S++G + G+ + Q +Q++ A
Sbjct: 132 LEQDALALNPAFIKKMKTGMPFVQLKMAASLDGQTALKNGQSQWITSPQARQDVQKFRAQ 191
Query: 261 ILSASSTKKYSI--------------PASQ----EPDANQPFRIITVSNHASPIRIPGLS 302
+ ST K I P+ Q + + QP R+I A P L
Sbjct: 192 SGAILSTSKTVIEDNASLNVRWDDLSPSLQSHYDQANLRQPVRVILDRQQA---LTPDLK 248
Query: 303 EESSSKVIVFTDGE-ITVEPDMGTKGIETVNL---HQLNLKAVLD-YCYSHGFCSVLVDL 357
+ DGE ITV P KG T L QL+L A H + V+
Sbjct: 249 -------LFKVDGEIITVAP----KGELTPELDANQQLDLSATFKALSQQHNINHLWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L I+QNL+ ++V+ + P GSDG
Sbjct: 298 GAT------LASSLIKQNLVDELVIYLAPKIMGSDG 327
>gi|418464420|ref|ZP_13035360.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359757216|gb|EHK91372.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 374
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 142/235 (60%), Gaps = 20/235 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VKDGKIVG+GFH KAG PHAEV ALR+AGE
Sbjct: 9 DASFMQLALDLAKQGEFTTTPNPSVGCVLVKDGKIVGKGFHFKAGDPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L++A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 AHGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN+ F+ R+ TGKPF L+ + ++G GE +G +Q+
Sbjct: 129 AVGLLAEKAEALNKGFLKRMRTGKPFVQLKLAMGIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA----------------SQEPDANQPFRIITVSNH 292
Y A +LS S T P+ +QE + QP R+I S H
Sbjct: 189 YRAKASAMLSTSQTVLADNPSLNVRWAELPNETQARYAQE-NLRQPVRVILDSTH 242
>gi|424061456|ref|ZP_17798945.1| riboflavin biosynthesis protein RibD, partial [Acinetobacter
baumannii Ab33333]
gi|404666333|gb|EKB34280.1| riboflavin biosynthesis protein RibD, partial [Acinetobacter
baumannii Ab33333]
Length = 287
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 135/186 (72%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQVIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L +AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILENAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|293610032|ref|ZP_06692333.1| hypothetical protein HMPREF0013_02182 [Acinetobacter sp. SH024]
gi|292827264|gb|EFF85628.1| hypothetical protein HMPREF0013_02182 [Acinetobacter sp. SH024]
Length = 361
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++G+GFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L +AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILENAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V VG+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEVGICEDLASKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|424591977|ref|ZP_18031401.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1037(10)]
gi|408030015|gb|EKG66696.1| riboflavin biosynthesis protein RibD [Vibrio cholerae CP1037(10)]
Length = 357
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 138/230 (60%), Gaps = 18/230 (7%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL GA
Sbjct: 2 MSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGELTRGA 61
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V VG+
Sbjct: 62 TAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGL 121
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA- 259
+ + LN F+ R+ TG PF L+ S++G G+ + + +Q + A
Sbjct: 122 LEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKDVQRFRAQ 181
Query: 260 --IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
ILS S T + Y +P+S E D QP R+I H
Sbjct: 182 ASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQH 231
>gi|91225069|ref|ZP_01260291.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01]
gi|91190012|gb|EAS76283.1| riboflavin-specific deaminase [Vibrio alginolyticus 12G01]
Length = 375
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 187/347 (53%), Gaps = 38/347 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+D +IVGEG+H +AG+PHAEV A+R AGE
Sbjct: 14 DFAMMSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMAGEK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC E LIKAKV +VV M+DPNP V +G++ LRDAGI+V
Sbjct: 74 AVGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ ++ LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QIGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQWITSPAARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRII-TVSNHASPIR 297
Y AI ILS S T + +P S + + QP R+I NH +
Sbjct: 194 YRAISGGILSTSKTVIDDNASLNVRWDDLPNSVQAQYLQEELRQPVRVILDRQNHLTDAL 253
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDL 357
L +VIV +DG+ D + + L +++ + +++ + +
Sbjct: 254 --KLFHTDGERVIVRSDGDCIPLLDSADQIDLSTTLKRISDEHHINHLWVEAGAT----- 306
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 307 ---------LASAMIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|261253738|ref|ZP_05946311.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954539|ref|ZP_12597573.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
orientalis CIP 102891 = ATCC 33934]
gi|260937129|gb|EEX93118.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342815259|gb|EGU50183.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
orientalis CIP 102891 = ATCC 33934]
Length = 368
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 142/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +T+PNP VGCVIV+ +IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 8 DFTMMSRAIELAKGGIYTTAPNPNVGCVIVQGDEIVGEGFHYRAGEPHAEVHALRMAGDR 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC E LIKAKV KV+ M DPNP V +G++ LRDAGI V
Sbjct: 68 AVGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPKVAGRGIQMLRDAGITV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ ++ + LN AFI ++ TG PF L+ S++G G+ + Q +Q+
Sbjct: 128 EVGLLEQQAESLNPAFIKQMKTGMPFVQLKMAASIDGQTALANGQSQWITSPQARQDVQK 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
Y A ILS S T + +P S + + QP R+I NH
Sbjct: 188 YRAKSGAILSTSKTVIEDNASLNVRWDDLPLSLQEAYSQQELRQPVRVILDRNH 241
>gi|78043574|ref|YP_360307.1| riboflavin biosynthesis protein RibD [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995689|gb|ABB14588.1| riboflavin biosynthesis protein RibD [Carboxydothermus
hydrogenoformans Z-2901]
Length = 361
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 167/289 (57%), Gaps = 8/289 (2%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D M+R ++LA +A+G TSPNP+VG VIV KDG IVGEG+H KAG PHAE AL+ AG
Sbjct: 2 NDQQLMKRALKLAKRALGRTSPNPVVGAVIVDKDGNIVGEGYHKKAGLPHAEREALKVAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A G T YV+LEPC HYGRTPPCT+A+I A +KKVVV + DPNP V+ KG+E LR+AGI
Sbjct: 62 EKARGGTMYVTLEPCCHYGRTPPCTDAIIAAGIKKVVVAVRDPNPKVSGKGIEILRNAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYY 250
+V GV E LNE F I TG PF +L++ ++V+G + + + SG +
Sbjct: 122 EVVEGVLAEEAFYLNEKFFKFIKTGLPFISLKWAMTVDGKIATETYDSRWVSGEKSRSFV 181
Query: 251 SQLLQEYDAIILSASS-TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
+L EYDA+++ A + + + P P+RI+ + P + E +
Sbjct: 182 HRLRNEYDAVLVGAKTLIIDNPLLTCRIPQGRNPYRIVLSGSGNLPEGLNIFQLEKEKNI 241
Query: 310 IVFTDGEITVEPDMGTKGIETVNL--HQLNLKAVLDYCYSHGFCSVLVD 356
++ ++ G I T L +++N+K G S+LV+
Sbjct: 242 LITASKKLPKHVSNGFGHIITTPLGENRINIKEAFLELSRLGIISILVE 290
>gi|365839617|ref|ZP_09380852.1| riboflavin biosynthesis protein RibD [Anaeroglobus geminatus F0357]
gi|364564458|gb|EHM42225.1| riboflavin biosynthesis protein RibD [Anaeroglobus geminatus F0357]
Length = 372
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 178/312 (57%), Gaps = 26/312 (8%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M + LA +G TSPNP VGCVIVKDG+IVG G+H +AG PHAEV+ALR+AGE A G+
Sbjct: 1 MEEALALARMGLGYTSPNPSVGCVIVKDGEIVGRGYHHRAGTPHAEVWALREAGERAAGS 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC HYGRTPPC AL+KA V KVV MLDPNP+V KG LR+AGI V VG+
Sbjct: 61 TVYVTLEPCAHYGRTPPCARALVKAGVAKVVCAMLDPNPLVAGKGAAILRNAGIPVIVGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG------VAESGGYYSQLL 254
++NE FI ++T +PF ++ S++G + G+ A GYY + L
Sbjct: 121 LSGKAIKINEVFIKNMITQQPFIAVKLAQSLDGVTASRTGKSKWITNDWARKRGYYLRSL 180
Query: 255 QEYDAIILSASSTKK-----YSIPASQEPDA-NQPFRIITVSNHASPIRIPGLSEESSSK 308
YDAI++ ++ + S + DA +QPFRII S ++ L + ++
Sbjct: 181 --YDAILVGINTVEADNPLLTSRTVREGHDAPHQPFRIILDSTGRIDLQAL-LVTDKQAR 237
Query: 309 VIVFTDGEITVEPD--MGTKGIETV-----NLHQLNLKAVLDYCYSHGFCSVLVD----L 357
+V T VE + G+E + + +++L A++ Y G S+LV+ +
Sbjct: 238 TMVITTKHCPVEKKEALERAGVEVLVAPLRDDDRVDLPAMVHTLYEKGIHSILVEGGSTV 297
Query: 358 RGNYGDLEMLLK 369
+G + D ++ K
Sbjct: 298 QGTFFDSNLVDK 309
>gi|289549140|ref|YP_003474128.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
gi|289182757|gb|ADC90001.1| riboflavin biosynthesis protein RibD [Thermocrinis albus DSM 14484]
Length = 353
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 186/322 (57%), Gaps = 18/322 (5%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA G T PNP VGCV+VKDGKI+ EG+H +AG PHAEV AL AG+ A+ +
Sbjct: 1 MGRALELARLRKGLTHPNPTVGCVVVKDGKIISEGYHERAGAPHAEVVALSKAGQNAKDS 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+HYGRTPPCT A+I+A VK+VVV LDPNP V G+ERLR AGI V VGV
Sbjct: 61 TLYVTLEPCSHYGRTPPCTNAIIEAGVKRVVVATLDPNPKVMGSGIERLRAAGIQVDVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQE 256
+E ++LNE F I +P+ TL++ S++G + + G+ ES + +L E
Sbjct: 121 LEEEARQLNEDFFVYITQNRPYITLKWAQSIDGSLATKTGDSKWITSRESREFAHRLRAE 180
Query: 257 YDAIILSASSTKKYS--IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT- 313
AI++ ++ K + QP R++ +P++ L ++S+K I+ T
Sbjct: 181 ATAILVGVNTVVKDDPLLTVRAFLWERQPIRVVLDPYLRTPLQ-ANLMVDTSAKTILVTC 239
Query: 314 ---DGEITVEPDMGTKGIETVNLH-QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
+ ++ DMG ++ + +++L+ ++ + + ++V+ G LE ++
Sbjct: 240 SQKEDKVKKLEDMGVSVVKAECVKGRVDLRWLMRWMHQQEIMHLMVE--GGARTLEGFIE 297
Query: 370 EGIEQNLLQKIVVEVLPVWNGS 391
EG L +IVV + P+ G+
Sbjct: 298 EG----LWDRIVVFLGPLLIGN 315
>gi|299771887|ref|YP_003733913.1| pyrimidine deaminase [Acinetobacter oleivorans DR1]
gi|298701975|gb|ADI92540.1| pyrimidine deaminase [Acinetobacter oleivorans DR1]
Length = 361
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 135/186 (72%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR A
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAA 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V VG+ + L ++LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEVGICENLAEKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGAVARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|402832980|ref|ZP_10881603.1| riboflavin biosynthesis protein RibD [Selenomonas sp. CM52]
gi|402281723|gb|EJU30349.1| riboflavin biosynthesis protein RibD [Selenomonas sp. CM52]
Length = 367
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 192/372 (51%), Gaps = 30/372 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +MR + LA A G TSPNP+VG VIV++G+IVG G+H KAG PHAEV AL AG
Sbjct: 2 QQDEDFMREALLLAANARGRTSPNPLVGAVIVREGRIVGAGWHRKAGTPHAEVHALAMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+LA GATAYV+LEPC+H+GRT PC EAL+KA VK+VV MLDPNP+V KG L AG+
Sbjct: 62 DLAHGATAYVTLEPCSHHGRTGPCAEALVKAGVKRVVAAMLDPNPLVAGKGKAMLEAAGV 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+VTVGV E +RLNEA++ + PF TL+ ++++G + G+ +G Q +
Sbjct: 122 EVTVGVLAEEARRLNEAYLKWVTEKLPFVTLKTAMTLDGKIATATGKSQWITGEAARQRV 181
Query: 255 QEY----DAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
E DAI++ + + + P R+I S +P+ + + ++
Sbjct: 182 HEMRDVADAIVVGIGTVLADDPSLTTRLADGTGRNPVRVIVDSRARTPLAAKVVQDGAAK 241
Query: 308 KVIVFTDGEITVEPD-----MGTKGIETVNL---HQLNLKAVLDYCYSHGFCSVLVDLRG 359
+I T P+ + G+E V +++L A++ + SV V+ G
Sbjct: 242 TLIAVT----CAAPEERCAALEAAGVEIVRAGEGERVDLDALMRLLAARDLTSVFVEGGG 297
Query: 360 --NYGDLEMLLKEGIEQNLLQKIV--VEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPK 415
N+ L L + I + KIV E L G+ L +L L +
Sbjct: 298 TLNFSLLAAGLVDKIHAFIAPKIVGGREALTPVEGAG-------FAELADAALLTRLTAE 350
Query: 416 MSSQSIVLEGYL 427
I+L GY+
Sbjct: 351 QVGADILLTGYV 362
>gi|445397504|ref|ZP_21429329.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-57]
gi|444784090|gb|ELX07921.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-57]
Length = 361
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 137/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++G+GFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGKGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|427426031|ref|ZP_18916102.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-136]
gi|425697174|gb|EKU66859.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-136]
Length = 361
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++G+GFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGQGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L +AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILENAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V VG+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEVGICEDLASKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|422923573|ref|ZP_16956720.1| riboflavin biosynthesis protein RibD [Vibrio cholerae BJG-01]
gi|341643862|gb|EGS68124.1| riboflavin biosynthesis protein RibD [Vibrio cholerae BJG-01]
Length = 367
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 175/346 (50%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGIPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + G + + H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAENGKL---------DLRELLALLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L K IEQ L+ +I++ + P GSDG L +LG
Sbjct: 299 SQ------LAKSLIEQKLVDEIILYLAPKLMGSDG---RGLFGALG 335
>gi|169634649|ref|YP_001708385.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Acinetobacter baumannii SDF]
gi|169153441|emb|CAP02583.1| bifunctional protein [Includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase) ] [Acinetobacter baumannii]
Length = 361
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHP+AGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPRAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + +G P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSSGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|260914242|ref|ZP_05920715.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
43325]
gi|260631875|gb|EEX50053.1| riboflavin biosynthesis protein RibD [Pasteurella dagmatis ATCC
43325]
Length = 377
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 132/194 (68%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VKDG IVG+GFH KAG+PHAEV ALRDAGE
Sbjct: 8 DAVFMQMALDLAQQGQFTTTPNPSVGCVLVKDGSIVGKGFHFKAGEPHAEVMALRDAGEQ 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC + LI+A V +VV M DPNP V KGL+ L + GI+
Sbjct: 68 AKGATAYVTLEPCSHFGRTPPCAKGLIEAGVARVVSAMRDPNPQVAGKGLQMLAEQGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
VG+ +E + LN F+ R+ TGKPF L+ +S++G GE +E Q+
Sbjct: 128 AVGLLEEKAEWLNRGFLKRMRTGKPFVQLKMAMSLDGRTALANGESKWITSELSRQDVQV 187
Query: 254 LQEYDAIILSASST 267
+ + ILSASST
Sbjct: 188 ERAKASAILSASST 201
>gi|410452700|ref|ZP_11306664.1| riboflavin-specific pyrimidine reductase/deaminase [Bacillus
bataviensis LMG 21833]
gi|409934182|gb|EKN71098.1| riboflavin-specific pyrimidine reductase/deaminase [Bacillus
bataviensis LMG 21833]
Length = 360
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 148/250 (59%), Gaps = 7/250 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM ++LA A G T+PNP+VG VIVKDG+IVG G H KAG PHAEV AL+ AG
Sbjct: 3 DEFYMDFALKLAQVAEGQTAPNPVVGAVIVKDGEIVGFGAHLKAGSPHAEVHALQMAGSR 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEG+T YV+LEPC+HYG+TPPC ALI++ VK+VV+ DPNP+V KG+ LRDAGI+V
Sbjct: 63 AEGSTVYVTLEPCSHYGKTPPCAMALIESGVKRVVIASTDPNPLVAGKGIALLRDAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
T GV E LNEAF + I KPF TL+ ++++G + Q G G +G Q +
Sbjct: 123 TSGVLKERADELNEAFFYYIQQQKPFVTLKQAITLDGKISSQPGIGEKITGSEVQQDVHN 182
Query: 256 ---EYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
+ DAI++ + S+ Q QP RII + H + + S
Sbjct: 183 DRGKQDAILVGIGTIFADNPSLTNRQGITKRQPIRII-LDTHLKMTNDRKVITDEQSPTW 241
Query: 311 VFTDGEITVE 320
+FT E+ E
Sbjct: 242 IFTGSEVEAE 251
>gi|348026994|ref|YP_004766799.1| riboflavin biosynthesis protein RibD [Megasphaera elsdenii DSM
20460]
gi|341823048|emb|CCC73972.1| riboflavin biosynthesis protein RibD [Megasphaera elsdenii DSM
20460]
Length = 378
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 152/248 (61%), Gaps = 18/248 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM++ ++LA A+G T+ NP VGCVIVKDG+IVG G+H KAG PHAEV+ALR+AGE A+G
Sbjct: 6 YMKKALDLAKTALGYTTSNPAVGCVIVKDGEIVGTGYHHKAGTPHAEVWALREAGERAKG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC HYGRTPPC L++ V KVV+ MLDPNP+V KG LR AGI V VG
Sbjct: 66 ATVYVTLEPCAHYGRTPPCARTLVEKGVGKVVMAMLDPNPLVAGKGAAILRQAGIPVEVG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG------VAESGGYYSQL 253
+ + +LNE FI ++ KPF ++ S++G + G+ A S G+Y L
Sbjct: 126 LLSKEAAQLNEVFIKNMMVQKPFIAIKLAQSLDGRTASRTGKSQWITNDWARSYGHY--L 183
Query: 254 LQEYDAIILSASS--------TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
YD I++ ++ T + P P +QP R++ + +P+ +++++
Sbjct: 184 RSIYDGILVGINTVLTDNPLLTSRIERPGQDAP--HQPVRVVLDTKGRTPLNSLVVTDKT 241
Query: 306 SSKVIVFT 313
+ +IV T
Sbjct: 242 TQTLIVTT 249
>gi|269962351|ref|ZP_06176701.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
harveyi 1DA3]
gi|269832847|gb|EEZ86956.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
harveyi 1DA3]
Length = 374
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 183/346 (52%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+
Sbjct: 14 DFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G + LRDAG++V
Sbjct: 74 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN+ FI + TG P+ L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLENEAIELNKGFIKFMQTGMPYVQLKMAASLDGQSALSNGQSQWITSPKARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
Y A+ ILS S T + +P S + + QP R+I +
Sbjct: 194 YRALSGGILSTSKTVIDDNASLNVRWDDLPNSVKAHYPQDEVRQPPRVI----------L 243
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S+ S + TDGE + G E Q++L A L S + L
Sbjct: 244 DRQSQLSDDLKLFNTDGERIIVSQGGDIAPELDKNGQVDLAATLQAVASGTHINHLWVEA 303
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
G L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 304 G-----ATLASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|262404604|ref|ZP_06081159.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC586]
gi|262349636|gb|EEY98774.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. RC586]
Length = 367
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 174/336 (51%), Gaps = 35/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E L+KA V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLVKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQC 187
Query: 254 LQEYDAIILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ + ILS S T + + +P S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPKSVQAQYAETDLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
S + + ++ + + G +L+L+ +L H V V+
Sbjct: 248 ALYQTPSPVLRVASENADLCISTENG----------KLDLRELLAQLAQQHNVNQVWVEA 297
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 298 GSQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|423628480|ref|ZP_17604229.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD154]
gi|401269005|gb|EJR75040.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD154]
Length = 365
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 185/326 (56%), Gaps = 33/326 (10%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--QLL 254
GV +E K++NE F I+T +PF T++ ++++G + + + +G Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTGARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPG 300
E AI++ A++ +K + P+ ++ P+ P RII V++ +P I
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFT 244
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
S ++ K I + + V T G + +NLH++ LD G S+LV+ G
Sbjct: 245 TSNHAAKKKIALENAGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLVEGGGE 296
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 297 VN------ASFIENKLMDKLILYVAP 316
>gi|388601537|ref|ZP_10159933.1| pyrimidine deaminase [Vibrio campbellii DS40M4]
Length = 374
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/347 (37%), Positives = 183/347 (52%), Gaps = 46/347 (13%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+ +GA
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDKTQGA 77
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G + LRDAG++V VG+
Sbjct: 78 TAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQVGL 137
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAI 260
+ LN+ FI + TG P+ L+ S++G G+ + Q +Q Y A+
Sbjct: 138 LESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQRYRAL 197
Query: 261 ---ILSASST----------KKYSIPAS---QEP--DANQPFRIITVSNHASPIRIPGLS 302
ILS S T + +P S Q P D QP R+I S
Sbjct: 198 SGGILSTSKTVIDDNASLNVRWEDLPKSVQTQYPQEDVRQPPRVI----------FDRQS 247
Query: 303 EESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-----DYCYSHGFCSVLVDL 357
+ S + TDGE + G E Q++L A L +Y +H + L
Sbjct: 248 QLSDDLKLFNTDGERIIVSQGGDMAPELDENGQIDLAATLRNVASEYHINHLWVEAGATL 307
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
+ I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 308 ASSL----------IKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|18309548|ref|NP_561482.1| riboflavin biosynthesis protein RibD [Clostridium perfringens str.
13]
gi|18144225|dbj|BAB80272.1| riboflavin biosynthesis protein [Clostridium perfringens str. 13]
Length = 366
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 175/299 (58%), Gaps = 15/299 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVKDG+I+G+G+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGNHAEINAINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K K+VVVG LDPNP+V+ KG++ LR++GI+V
Sbjct: 62 TEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKGIKILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + + + +S +
Sbjct: 122 KVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKEFKSKWITNRKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L +S S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQSES 241
Query: 308 KVIVFTDG--EITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT + + KGIE + ++ ++N+ VL+ SVL++ GN
Sbjct: 242 KTLIFTTNKKDKIKNEKLKDKGIEVIEVNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|416051830|ref|ZP_11577853.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992642|gb|EGY34027.1| riboflavin biosynthesis protein RibD [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 374
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 143/234 (61%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +T+PNP VGCV+VKDG IVG+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DAAFMQLALDLAKQGEFTTTPNPSVGCVLVKDGNIVGKGFHFKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + L++A V KV+ M DPNP V KGL+ L DAGI
Sbjct: 69 AHGATAYVTLEPCSHFGRTPPCAKGLVEAGVSKVIAAMCDPNPQVAGKGLQILADAGIQS 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN+ F+ R+ TGKPF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLAEKAEVLNKGFLKRMRTGKPFVQLKLAMSIDGKTAMASGESKWITGAQARMDVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA-----SQEPDAN----------QPFRIITVSNH 292
Y A +LS S T P+ ++ P+ QP R+I S H
Sbjct: 189 YRAKASAMLSTSQTVLADNPSLNVRWAELPNETQARYAQEHLRQPVRVILDSAH 242
>gi|417825504|ref|ZP_12472092.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE48]
gi|423823010|ref|ZP_17717020.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55C2]
gi|423856975|ref|ZP_17720827.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59A1]
gi|423957576|ref|ZP_17735319.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-40]
gi|424017430|ref|ZP_17757259.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55B2]
gi|424020355|ref|ZP_17760138.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59B1]
gi|424641246|ref|ZP_18079129.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A1]
gi|424649314|ref|ZP_18086977.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A1]
gi|340046989|gb|EGR07919.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE48]
gi|408022731|gb|EKG59926.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-56A1]
gi|408032030|gb|EKG68629.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-57A1]
gi|408634986|gb|EKL07221.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55C2]
gi|408640322|gb|EKL12118.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59A1]
gi|408656514|gb|EKL27608.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-40]
gi|408859612|gb|EKL99269.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55B2]
gi|408866932|gb|EKM06303.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-59B1]
Length = 365
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 171/335 (51%), Gaps = 33/335 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 6 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 66 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVSKVICAMQDPNPQVAGKGVQMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 126 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 186 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 245
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + G + + H V V+
Sbjct: 246 ALYQTPSPVLRVASENAELCISAENGKL---------DLRELLALLAQQHNVNQVWVEAG 296
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 297 SQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 325
>gi|417821601|ref|ZP_12468215.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE39]
gi|419830719|ref|ZP_14354204.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-1A2]
gi|419834402|ref|ZP_14357857.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A2]
gi|422918108|ref|ZP_16952426.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02A1]
gi|423883603|ref|ZP_17724414.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-60A1]
gi|423985556|ref|ZP_17738870.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-46]
gi|423998533|ref|ZP_17741785.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02C1]
gi|424625729|ref|ZP_18064190.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A1]
gi|424630217|ref|ZP_18068501.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-51A1]
gi|424634261|ref|ZP_18072361.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-52A1]
gi|424637338|ref|ZP_18075346.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55A1]
gi|443528231|ref|ZP_21094275.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-78A1]
gi|340039232|gb|EGR00207.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE39]
gi|341636990|gb|EGS61684.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02A1]
gi|408011670|gb|EKG49477.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-50A1]
gi|408017624|gb|EKG55115.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-52A1]
gi|408023126|gb|EKG60306.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-55A1]
gi|408054185|gb|EKG89171.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-51A1]
gi|408620492|gb|EKK93504.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-1A2]
gi|408640669|gb|EKL12457.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-60A1]
gi|408649224|gb|EKL20541.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-61A2]
gi|408663673|gb|EKL34535.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HE-46]
gi|408852432|gb|EKL92260.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-02C1]
gi|443453489|gb|ELT17312.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HC-78A1]
Length = 367
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 171/335 (51%), Gaps = 33/335 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVSKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + G + + H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAENGKL---------DLRELLALLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + IEQ L+ +I++ + P GSDG
Sbjct: 299 SQ------LAQSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|226355049|ref|YP_002784789.1| riboflavin biosynthesis protein [Deinococcus deserti VCD115]
gi|226317039|gb|ACO45035.1| putative Riboflavin biosynthesis protein ribD [Deinococcus deserti
VCD115]
Length = 368
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 121/170 (71%), Gaps = 2/170 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR + A + +G TSPNP VGCVIV+DG++VG GFHP+AG+PHAEVFALR+AGE
Sbjct: 8 DTEYMRLALNEAARGMGRTSPNPPVGCVIVRDGQVVGRGFHPRAGEPHAEVFALREAGEY 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV+ LDPNP V +G RLR+AGI+V
Sbjct: 68 ARGATAYVTLEPCSHFGRTPPCADALVAAGVSQVVIAALDPNPRVGGQGASRLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV--LDQLGEGVA 244
VGV +E R F ++ +P+ +Y ++++G V LD G G A
Sbjct: 128 IVGVAEEEALRQQAGFRSLVMRARPWVIYKYAMTLDGKVAALDASGRGEA 177
>gi|385872836|gb|AFI91356.1| Riboflavin biosynthesis protein RibD [Pectobacterium sp. SCC3193]
Length = 388
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 142/239 (59%), Gaps = 28/239 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 23 DAFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAGER 82
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ +GI V
Sbjct: 83 ARGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLHRLQQSGITV 142
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ GV +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 143 SHGVMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 202
Query: 257 Y---DAIILSASST--------------------KKYSIPASQEPDANQPFRIITVSNH 292
+ A ILS+S+T K+YS E D QP R+I S
Sbjct: 203 FRAESAAILSSSATVLADDPSLTVRWLELDADVQKRYS-----EADLRQPVRVIVDSQQ 256
>gi|85712650|ref|ZP_01043696.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145]
gi|85693500|gb|EAQ31452.1| Riboflavin-specific deaminase/reductase [Idiomarina baltica OS145]
Length = 373
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/232 (45%), Positives = 143/232 (61%), Gaps = 19/232 (8%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
DK D YM R +ELA K +T PNP VGCVIVKD IVGEG+H KAG+PHAEVFALR
Sbjct: 6 QDKHDHLYMHRALELARKGRFTTGPNPAVGCVIVKDASIVGEGWHQKAGEPHAEVFALRQ 65
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AG A+ ATAYV+LEPC+H GRTPPC +ALI A+V +VV+ M DPNP+V+ +G+ +L DA
Sbjct: 66 AGTQAKHATAYVTLEPCSHQGRTPPCVDALINAEVARVVIAMQDPNPVVSGRGIHKLHDA 125
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYY 250
I+V VG+ + + LN FIHR+ T P+ ++ S++G L GV++ +G
Sbjct: 126 DIEVRVGLFETAARALNPGFIHRMQTQLPYVRVKLASSLDGRT--ALSNGVSQWITGAAA 183
Query: 251 SQLLQEY----DAIILSASST----KKYSIPASQEPDA-------NQPFRII 287
+Q + DAI+ A + + ++ Q P+ QP R+I
Sbjct: 184 RADVQVWRAQADAILTGADTVLVDNPRLNVRPEQWPNGIEKPLFFKQPVRVI 235
>gi|104779848|ref|YP_606346.1| riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48]
gi|95108835|emb|CAK13531.1| Riboflavin biosynthesis protein RibD [Pseudomonas entomophila L48]
Length = 375
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 164/301 (54%), Gaps = 26/301 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R VELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 8 DAHYMARAVELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V GL RLR+AGI+V
Sbjct: 68 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGNGLRRLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF + +S++G GE +G +Q
Sbjct: 128 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAAVQR 187
Query: 257 YDA----IILSASSTKKYSIPASQEPD-------------ANQPFRIITVSNHASPIRIP 299
A ++ SA S + + + + + P R++ P+ P
Sbjct: 188 LRARSSVVLTSAQSVLQDNARMTVRGEELGLDSALTTLALSRPPLRVLVDGRLRLPLDAP 247
Query: 300 GLSEESSSKVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLV 355
++ ++V G+ +P G E +NL Q++L A+L G +L+
Sbjct: 248 FF--QAGPALVVTAAGD---DPRYAAAGHELLNLPGDDDQVDLPALLRCLAERGVNEILL 302
Query: 356 D 356
+
Sbjct: 303 E 303
>gi|403673095|ref|ZP_10935408.1| ribD [Acinetobacter sp. NCTC 10304]
gi|421649757|ref|ZP_16090140.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC0162]
gi|425749715|ref|ZP_18867686.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-348]
gi|408512498|gb|EKK14139.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC0162]
gi|425488056|gb|EKU54397.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
WC-348]
Length = 361
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 135/186 (72%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+A
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPKAGQPHAEVFALREAD 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L +AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILENAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|269965078|ref|ZP_06179243.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B]
gi|269830381|gb|EEZ84606.1| riboflavin-specific deaminase [Vibrio alginolyticus 40B]
Length = 375
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 187/347 (53%), Gaps = 38/347 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+D +IVGEG+H +AG+PHAEV A+R AGE
Sbjct: 14 DFAMMSRAIKLAKRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMAGEK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC E LIKAKV +VV M+DPNP V +G++ LRDAGI+V
Sbjct: 74 AVGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ ++ LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QIGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALNNGQSQWITSPAARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRII-TVSNHASPIR 297
Y A+ ILS S T + +P S + + QP R+I NH +
Sbjct: 194 YRAMSGGILSTSKTVIDDNASLNVRWDDLPTSVQAQYLREELRQPVRVILDRQNHLTGAL 253
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDL 357
L +VI+ +DG+ D + + L +++ + +++ + +
Sbjct: 254 --KLFHTDGERVIIRSDGDCIPLLDSADQIDLSTTLKRISDEHHINHLWVEAGAT----- 306
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 307 ---------LASAMIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|421074218|ref|ZP_15535258.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans JBW45]
gi|392527724|gb|EIW50810.1| riboflavin biosynthesis protein RibD [Pelosinus fermentans JBW45]
Length = 376
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 149/245 (60%), Gaps = 8/245 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM + + LA A G TSPNPMVG VIV+DG++VGEG+H KAG PHAE+ AL+ AG+L
Sbjct: 2 DEKYMGQALALAQYAKGRTSPNPMVGAVIVRDGRVVGEGWHRKAGTPHAEINALQQAGDL 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A A+ YV+LEPC+H+GRT PC EALI A +KKV++ M DPNP+V +G+ +LR+AGI+V
Sbjct: 62 AYNASIYVTLEPCSHHGRTGPCVEALIAAGIKKVIIAMTDPNPLVAGQGISKLREAGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE-----GVAESGGYYS 251
GV + +LNE FI I T KPF L+ +S++G + G GV ES Y
Sbjct: 122 IEGVLAKEAAKLNETFIKWISTKKPFVLLKSAMSLDGKIASYTGHSKWITGV-ESRIYVH 180
Query: 252 QLLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
QL YDAI++ + ++ P R++ S +PI +++ + +
Sbjct: 181 QLRDTYDAILVGIGTVLADNPTLTTRLAYQGKNPIRVVVDSMARTPIHSNVVTDGLARTM 240
Query: 310 IVFTD 314
I TD
Sbjct: 241 IAVTD 245
>gi|421083023|ref|ZP_15543902.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pectobacterium wasabiae CFBP 3304]
gi|401702249|gb|EJS92493.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pectobacterium wasabiae CFBP 3304]
Length = 388
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 142/239 (59%), Gaps = 28/239 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 23 DEFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAGEH 82
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 83 ARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGITV 142
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ GV +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 143 SHGVMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 202
Query: 257 Y---DAIILSASST--------------------KKYSIPASQEPDANQPFRIITVSNH 292
+ A ILS+S+T K+YS E D QP R+I S
Sbjct: 203 FRAESAAILSSSATVLADDPSLTVRWLELDADVQKRYS-----EADLRQPVRVIVDSQR 256
>gi|262395034|ref|YP_003286888.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. Ex25]
gi|262338628|gb|ACY52423.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio sp. Ex25]
Length = 375
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 186/347 (53%), Gaps = 38/347 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+D +IVGEG+H +AG+PHAEV A+R AGE
Sbjct: 14 DFAMMSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMAGEK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC E LIKAKV +VV M+DPNP V +G++ LRDAGI+V
Sbjct: 74 AVGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ ++ LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QIGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQWITSPVARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRII-TVSNHASPIR 297
Y A+ ILS S T + +P S + + QP R+I NH +
Sbjct: 194 YRAMSGGILSTSKTVIDDNASLNVRWDDLPTSVQAQYLREELRQPVRVILDRQNHLTDAL 253
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDL 357
L +VIV DG+ D + + L +++ + +++ + +
Sbjct: 254 --KLFHTDGERVIVSPDGDCIPLLDSADQIDLSTTLKRISDEHHINHLWVEAGAT----- 306
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 307 ---------LASAMIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|296503905|ref|YP_003665605.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
thuringiensis BMB171]
gi|296324957|gb|ADH07885.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
thuringiensis BMB171]
Length = 365
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 182/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P RII S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT + + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAKKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 299 ----ASFIENKLMDKLILYVAP 316
>gi|410657202|ref|YP_006909573.1| riboflavin biosynthesis protein RibD [Dehalobacter sp. DCA]
gi|410660237|ref|YP_006912608.1| riboflavin biosynthesis protein RibD [Dehalobacter sp. CF]
gi|409019557|gb|AFV01588.1| riboflavin biosynthesis protein RibD [Dehalobacter sp. DCA]
gi|409022593|gb|AFV04623.1| riboflavin biosynthesis protein RibD [Dehalobacter sp. CF]
Length = 381
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YM R + LA A G TSPNP+VGCVIV+DG+IVGEG H KAG PHAEV AL AG
Sbjct: 8 EDKNYMERALNLALLAAGRTSPNPLVGCVIVRDGQIVGEGCHRKAGTPHAEVHALNAAGS 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
AEGA YV+LEPC+HYGRTPPCT+ALI A VKKV+V M DPNP+V+ +G+++L+DAGI
Sbjct: 68 SAEGADVYVTLEPCSHYGRTPPCTDALIAAGVKKVIVAMTDPNPLVSGQGVKKLQDAGIL 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V G+ E +++NE F+ I+T PF + ++++G + G+ +E ++
Sbjct: 128 VETGLLAEKARKINEPFLKAIITKMPFVLYKAAMTLDGRTAVESGDSKWITSEEARHFVH 187
Query: 253 LLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L+ +I+ S T P + P R+I + + P+ L ES+S+
Sbjct: 188 GLRNTFDVIMVGSQTVLQDNPLLTCRNIENGRDPVRLIVDGSLSVPLNAQILRNESASRC 247
Query: 310 IVFT 313
I+ T
Sbjct: 248 IIAT 251
>gi|410461189|ref|ZP_11314841.1| riboflavin biosynthesis protein RibD [Bacillus azotoformans LMG
9581]
gi|409925974|gb|EKN63172.1| riboflavin biosynthesis protein RibD [Bacillus azotoformans LMG
9581]
Length = 364
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 168/302 (55%), Gaps = 35/302 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR +ELA G TSPNP+VG V+VK+ +IVG G H KAG+PHAEV A+ AG+
Sbjct: 3 DQDYMRLAIELAANTNGQTSPNPLVGAVVVKENQIVGMGAHLKAGEPHAEVHAINMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+H+GRTPPC + LIK++VK+VV+ DPNP+V KG+E+LR AGI+V
Sbjct: 63 AKGATIYVTLEPCSHHGRTPPCADLLIKSEVKRVVIASTDPNPLVAGKGIEKLRKAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQ 252
VG+ E ++LNE F H I TG P+ TL+ S++G + GE ES +
Sbjct: 123 DVGILREEAEQLNEVFFHYISTGMPYVTLKSATSLDGKIATVSGESKWITSEESRLDVHK 182
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPD--------ANQPFRIITVSNHASPIRIPGLSEE 304
++D I++ ++ K +P+ P RII +N +P PG
Sbjct: 183 YRHQHDGILVGVNTIIK------DDPELTTRLPLGGKNPIRIILDTNLRTP---PGAKIV 233
Query: 305 SSSKVIVFTDGEITVEPDMGTKGIETVNLHQ----------LNLKAVLDYCYSHGFCSVL 354
+ +K + I V + + I+T+N Q LN+ VL G S+
Sbjct: 234 NDNKAPTW----IIVGKNAAAEKIQTMNEKQAQVIEMSFDTLNIHNVLKLLAEKGITSLF 289
Query: 355 VD 356
V+
Sbjct: 290 VE 291
>gi|423649248|ref|ZP_17624818.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD169]
gi|401283821|gb|EJR89698.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD169]
Length = 365
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 184/326 (56%), Gaps = 33/326 (10%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPG 300
E AI++ A++ +K + P+ ++ P+ P RII V++ +P I
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFT 244
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
S ++ K I + + V T G + +NLH++ LD G S+L++ G
Sbjct: 245 TSNHAAKKKIALENAGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLIEGGGE 296
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 297 VN------ASFIENKLMDKLILYVAP 316
>gi|444425611|ref|ZP_21221047.1| pyrimidine deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444241084|gb|ELU52613.1| pyrimidine deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 374
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 188/349 (53%), Gaps = 42/349 (12%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+
Sbjct: 14 DFEMMSRALMLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+GATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G + LRDAG++V
Sbjct: 74 TQGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN+ FI + TG P+ L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPAS---QEP--DANQPFRII--TVSNHASPI 296
Y A+ ILS S T + +P S Q P D QP R+I S + +
Sbjct: 194 YRALSGGILSTSKTVIDDNASLNVRWEDLPKSVQTQYPQEDVRQPPRVIFDRQSQLSDDL 253
Query: 297 RIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYS-HGFCSVLV 355
+ L ++IV G++ P++G G Q++L A L S H + V
Sbjct: 254 K---LFNTDGERIIVSQGGDMV--PELGENG-------QIDLAATLRNVASGHHINHLWV 301
Query: 356 DLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
+ L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 302 EAGAT------LASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|445461810|ref|ZP_21448984.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC047]
gi|444770892|gb|ELW95029.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
OIFC047]
Length = 361
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 135/186 (72%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG + L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAKLNQGFLKAMSTGMSYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|429764753|ref|ZP_19297062.1| riboflavin biosynthesis protein RibD [Clostridium celatum DSM 1785]
gi|429187521|gb|EKY28433.1| riboflavin biosynthesis protein RibD [Clostridium celatum DSM 1785]
Length = 379
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 195/385 (50%), Gaps = 47/385 (12%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D FYM ++LA K G +PNP+VG +IV+DG I+G G+H + G+ HAEV A DA
Sbjct: 5 KLDKFYMNIALQLAKKGKGKVNPNPLVGAIIVRDGVILGRGYHKEYGKAHAEVNAFLDAK 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E GAT YV LEPC+HYG+TPPC E +I+ K+ +VV+GM+DPNP+V KG+E+L+ +GI
Sbjct: 65 EDITGATMYVILEPCSHYGKTPPCVERIIENKISRVVIGMIDPNPLVAGKGIEKLKKSGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYY 250
VTVGV +E C++LNE FI I +PF L+ +S++G + GE +G
Sbjct: 125 TVTVGVLEEECRKLNEVFIKYITKNEPFVVLKTAMSLDGKIATSRGESKWITGEKARNEV 184
Query: 251 SQLLQEYDAIILSASSTKKYSIPASQE-----PDANQPFRIITVSNHASPIRIPGLSEES 305
L E +AI++ + I + E + P RII S P+ L +
Sbjct: 185 HNLRNELEAIMVGVDTV----IIDNPELTCRLENGRNPIRIIVDSTLKIPLNSKVLKNQD 240
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+K IV T E E K +E + + L + D Y + ++R +L
Sbjct: 241 EAKTIVATKKEAIEEK---VKKLEALGVTVLKISD--DKEYENN------NIRNKKVNLN 289
Query: 366 MLLKE--------------------GIEQNLLQKIVVEVLPVWNG---SDGGNPHTLLNS 402
L+KE +++ ++ KI V + P G S G T ++
Sbjct: 290 NLMKELGKLNIDGVLLEGGATLNYSALQEGIVDKIQVYIAPKIIGGLNSKGPVGGTGIDF 349
Query: 403 LGKRLILKNLQPKMSSQSIVLEGYL 427
L + +L K + I++EGY+
Sbjct: 350 LKDAFKINDLTSKFIGEDILIEGYI 374
>gi|260775295|ref|ZP_05884192.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio coralliilyticus ATCC BAA-450]
gi|260608476|gb|EEX34641.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio coralliilyticus ATCC BAA-450]
Length = 368
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 172/331 (51%), Gaps = 33/331 (9%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA + +T+PNP VGCVI D IVGEGFH +AG+PHAEV ALR AG+ + GA
Sbjct: 12 MSRAIELAKGGIYTTAPNPNVGCVITLDDDIVGEGFHYRAGEPHAEVHALRMAGDKSVGA 71
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC E LIKAKV KV+ M DPNP V +G++ L DAGI+V VG+
Sbjct: 72 TAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMEDPNPQVAGRGIKMLCDAGIEVQVGL 131
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA- 259
+ LN AFI R+ TG PF L+ S +G G+ + Q +Q Y A
Sbjct: 132 LESDAMALNSAFIKRMKTGMPFVQLKMAASFDGQTALSNGQSQWITSPQARQDVQNYRAQ 191
Query: 260 --IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRIPGLS 302
ILS S T + Y +P S E + QP R++
Sbjct: 192 AGAILSTSKTVIEDNASLNVRWYELPESVQAKLPESEVRQPVRVVLDRQQ---------- 241
Query: 303 EESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
+ SS TDGE V G + Q++LK+ SH + L +
Sbjct: 242 QLSSELKFYSTDGERIVVSAQGDVAPLLNDSEQIDLKSTFANLVSHHNINHLW-VEAGAT 300
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L+KEG L+ ++++ + P GSDG
Sbjct: 301 LASSLIKEG----LVDELILYLAPKIMGSDG 327
>gi|374295532|ref|YP_005045723.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Clostridium clariflavum DSM 19732]
gi|359825026|gb|AEV67799.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase,
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Clostridium clariflavum DSM 19732]
Length = 357
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 194/363 (53%), Gaps = 22/363 (6%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA G T+PNP+VG VIVKD +++ EGFH G HAEV A ++A E G+
Sbjct: 1 MERAIELAKNGWGRTNPNPLVGAVIVKDDRVIAEGFHEAIGCDHAEVSAFKNAVEDVAGS 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+HYGRTPPC +A+++ K+KKVV+ M+DPNP V+ KG++ L+DAGI+V VG+
Sbjct: 61 TLYVNLEPCSHYGRTPPCAKAIVEKKIKKVVIAMIDPNPKVSGKGVQMLKDAGIEVEVGI 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
++ ++LNE FI+ + +PF L+ ++++G + G+ +E Y +L++
Sbjct: 121 LEDEARKLNEIFINYVTKKRPFVILKTAMTLDGKIASSTGDSKWITSEESRAYVHILRDR 180
Query: 258 DAIILSASSTKKYSIPA----SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
+ I+ +T P ++ + P RII S P+ L +S + VI+ T
Sbjct: 181 VSAIMVGINTVIKDNPMLTTRLEQKVGSDPVRIIVDSKGIIPMDSKVLCNDSKAGVILAT 240
Query: 314 DGEITVEPD--MGTKGIETVNLHQLN----LKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
I E + + G+ + N LK ++ Y SVL++ G L
Sbjct: 241 TSRIHEEKEKQLIDNGVTVIKAEGENGCVDLKKLMQELYKLEIDSVLLEGGGT------L 294
Query: 368 LKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIVLE 424
E ++ K + + P + G D P + S+ + L LKN+ + I++E
Sbjct: 295 NAAAFESGIVDKAMFFIAPKILGGKDAITPVEGKGIQSMSEALKLKNVSFSKFGEDILVE 354
Query: 425 GYL 427
GYL
Sbjct: 355 GYL 357
>gi|261822528|ref|YP_003260634.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium wasabiae WPP163]
gi|261606541|gb|ACX89027.1| riboflavin biosynthesis protein RibD [Pectobacterium wasabiae
WPP163]
Length = 369
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 142/239 (59%), Gaps = 28/239 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DAFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ +GI V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLHRLQQSGITV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ GV +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 SHGVMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 Y---DAIILSASST--------------------KKYSIPASQEPDANQPFRIITVSNH 292
+ A ILS+S+T K+YS E D QP R+I S
Sbjct: 184 FRAESAAILSSSATVLADDPSLTVRWLELDADVQKRYS-----EADLRQPVRVIVDSQQ 237
>gi|451970644|ref|ZP_21923869.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio
alginolyticus E0666]
gi|451933372|gb|EMD81041.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Vibrio
alginolyticus E0666]
Length = 375
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 186/347 (53%), Gaps = 38/347 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+D +IVGEG+H +AG+PHAEV A+R AGE
Sbjct: 14 DFAMMSRAIKLARRGIYTTAPNPNVGCVIVRDEEIVGEGYHHRAGEPHAEVHAMRMAGEK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC E LIKAKV +VV M+DPNP V +G++ LRDAGI+V
Sbjct: 74 AVGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAGRGIQMLRDAGIEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ ++ LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QIGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALSNGQSQWITSPEARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRII-TVSNHASPIR 297
Y A+ ILS S T + +P S + + QP R+I NH +
Sbjct: 194 YRAMSGGILSTSKTVIDDNASLNVRWDDLPTSVQAQYLREELRQPVRVILDRQNHLTDAL 253
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDL 357
L +VIV DG+ D + + L +++ + +++ + +
Sbjct: 254 --KLFHTDGERVIVSPDGDCIPLLDSADQIDLSTTLKRISDEHHINHLWVEAGAT----- 306
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 307 ---------LASAMIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|229524273|ref|ZP_04413678.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae bv. albensis VL426]
gi|229337854|gb|EEO02871.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio cholerae bv. albensis VL426]
Length = 367
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 170/335 (50%), Gaps = 33/335 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R A EL
Sbjct: 8 DHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAAEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V KG++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + + +P+S E D QP R+I H +
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQHQLHPEL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + + E+ + + G + + H V V+
Sbjct: 248 ALYQTPSPVLRVASENAELCISAENGKL---------DLRELLALLAQQHNVNQVWVEAG 298
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K IEQ L+ +I++ + P GSDG
Sbjct: 299 SQ------LAKSLIEQKLVDEIILYLAPKLMGSDG 327
>gi|196248758|ref|ZP_03147458.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16]
gi|196211634|gb|EDY06393.1| riboflavin biosynthesis protein RibD [Geobacillus sp. G11MC16]
Length = 366
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YMR +++A VG TSPNP VG V+V DG IVG G H KAG+PHAEV A+R AGE
Sbjct: 3 NDEHYMRLALDVAKAGVGQTSPNPAVGAVVVNDGTIVGIGAHLKAGEPHAEVHAIRMAGE 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GAT YV+LEPC+HYG+TPPC + LI+A V++VVV DPNP+V KG+ +LR AGID
Sbjct: 63 KARGATVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDPNPLVAGKGINKLRRAGID 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGY--YS 251
V VG+ E LN F H I T PF T++Y S++G + GE + S
Sbjct: 123 VEVGILKEEADELNRMFFHYIATKTPFVTIKYACSLDGKIATATGESKWITSSAAREDVH 182
Query: 252 QLLQEYDAIILSASSTK----KYSIPASQEPDANQPFRIITVSNHASPI 296
+L ++DAI++ ++ K ++ Q+ P R+I +N +P+
Sbjct: 183 RLRAQHDAILVGVNTVMADNPKLTVRIGQQ--RKNPLRVILDTNLHTPL 229
>gi|423685431|ref|ZP_17660239.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Vibrio fischeri SR5]
gi|371495343|gb|EHN70939.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Vibrio fischeri SR5]
Length = 372
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 187/361 (51%), Gaps = 58/361 (16%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M++ + LA + + +T+PNP VGCV+VK+GKIVGEG H KAG+PHAEV ALR AG+
Sbjct: 7 DHLMMQKAILLAKQGIYTTAPNPNVGCVLVKNGKIVGEGAHLKAGEPHAEVHALRQAGKE 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA VKKV+ M+DPNP V +GL L +AGI+
Sbjct: 67 AQGATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLNEAGIET 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLL 254
G+ + + LN F+ R+ TGKPF L+ S++G L GV++ + Q +
Sbjct: 127 ASGLLEADARALNPHFLTRMETGKPFVQLKMAASLDGKT--ALKNGVSQWITSKEARQDV 184
Query: 255 QEYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPI 296
Q Y A ILS + T + +P+S + QP R I HA
Sbjct: 185 QRYRAQSGAILSTAKTVIDDDASLNVRWSDLPSSIQESYHQAAIRQPMRFILDRQHAL-- 242
Query: 297 RIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLH--------QLNLKAVL-----D 343
+S + GE+ T I T H QL+LK V+ D
Sbjct: 243 --------TSDLKLFQASGEVVTISSQNTHPIVTSENHMQCCVDDDQLDLKEVVNKISRD 294
Query: 344 YCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSL 403
+ +H + L + I NL+ ++++ + P G+DG +++N +
Sbjct: 295 FNVNHIWVEAGATLAASM----------INDNLVDELIIYLAPKLMGADG---RSIINLI 341
Query: 404 G 404
G
Sbjct: 342 G 342
>gi|421656089|ref|ZP_16096400.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-72]
gi|408506395|gb|EKK08106.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
Naval-72]
Length = 361
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 136/186 (73%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 VHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|423641604|ref|ZP_17617222.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD166]
gi|401277554|gb|EJR83493.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD166]
Length = 365
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 184/326 (56%), Gaps = 33/326 (10%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKVNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPG 300
E AI++ A++ +K + P+ ++ P+ P RII V++ +P I
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFT 244
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
S ++ K I + + V T G + +NLH++ LD G S+L++ G
Sbjct: 245 TSNHAAKKKIALENAGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLIEGGGE 296
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 297 VN------ASFIENKLMDKLILYVAP 316
>gi|59711307|ref|YP_204083.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Vibrio fischeri ES114]
gi|59479408|gb|AAW85195.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Vibrio fischeri ES114]
Length = 372
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 189/361 (52%), Gaps = 58/361 (16%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M++ + LA + + +T+PNP VGCV+VK+GKI+GEG H KAG+PHAEV ALR AG+
Sbjct: 7 DHLMMQKAILLAKQGIYTTAPNPNVGCVLVKNGKIIGEGAHLKAGEPHAEVHALRQAGKE 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA VKKV+ M+DPNP V +GL L +AGI+
Sbjct: 67 AQGATAYVTLEPCSHYGRTPPCAEGLIKAGVKKVICAMVDPNPQVAGRGLAMLDEAGIET 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLL 254
G+ + + LN F+ R+ TGKPF L+ S++G L GV++ + Q +
Sbjct: 127 ASGLLEADARALNPHFLTRMETGKPFVQLKMAASLDGKT--ALKNGVSQWITSKEARQDV 184
Query: 255 QEYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPI 296
Q Y A ILS + T + +P S Q+ QP R I H
Sbjct: 185 QRYRAQSGAILSTAKTVIDDDASLNVRWSDLPPSIQESYQQASIRQPMRFILDRQH---- 240
Query: 297 RIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLH--------QLNLKAVL-----D 343
S S K+ +D +T+ T I T H QL+LK V+ D
Sbjct: 241 -----SLTSDLKLFQASDEVVTIS-SQNTHPIGTSENHMQCRVDDGQLDLKEVVNKISRD 294
Query: 344 YCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSL 403
+ +H + L + I NL+ ++++ + P G+DG +++N +
Sbjct: 295 FNVNHIWVEAGATLAASM----------INDNLVDELIIYLAPKLMGADG---RSIINLI 341
Query: 404 G 404
G
Sbjct: 342 G 342
>gi|421464545|ref|ZP_15913235.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
WC-A-157]
gi|400205298|gb|EJO36279.1| riboflavin biosynthesis protein RibD [Acinetobacter radioresistens
WC-A-157]
Length = 351
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 122/180 (67%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
MRR +ELA ST PNP VGCVIVKDG+I+GEG+HP+AGQPHAEVFALR AGE A+ A
Sbjct: 1 MRRAIELARLGQYSTKPNPNVGCVIVKDGQIIGEGYHPRAGQPHAEVFALRQAGEQAQDA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC HYGRTPPC EAL+K ++KKVV+ DPNP+V KG+ L+ AGI+V G+
Sbjct: 61 TAYVTLEPCAHYGRTPPCAEALVKHQLKKVVIACPDPNPLVAGKGIAILKQAGIEVESGI 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAI 260
+ RLN F+ + G P+ L+ S++G GE +G Q +Q + AI
Sbjct: 121 CENEAVRLNCGFLKAMAVGMPYVRLKVASSLDGRTAMASGESKWITGKAARQDVQHWRAI 180
>gi|312110361|ref|YP_003988677.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
gi|336234823|ref|YP_004587439.1| riboflavin biosynthesis protein RibD [Geobacillus
thermoglucosidasius C56-YS93]
gi|423719379|ref|ZP_17693561.1| riboflavin biosynthesis protein ribD [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215462|gb|ADP74066.1| riboflavin biosynthesis protein RibD [Geobacillus sp. Y4.1MC1]
gi|335361678|gb|AEH47358.1| riboflavin biosynthesis protein RibD [Geobacillus
thermoglucosidasius C56-YS93]
gi|383367684|gb|EID44960.1| riboflavin biosynthesis protein ribD [Geobacillus thermoglucosidans
TNO-09.020]
Length = 361
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 118/167 (70%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
++D YMR +E+A +G TSPNP+VG V+V G+IVG G H KAG+PHAEV A+R AG
Sbjct: 2 RNDEQYMRLAIEMAKAGIGQTSPNPIVGAVVVNSGEIVGFGAHLKAGEPHAEVHAIRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC + LI A V++VV+ DPNP+V KG+E+LR+AGI
Sbjct: 62 EKAKGATVYVTLEPCSHYGKTPPCADLLIDAGVRRVVIATTDPNPLVAGKGIEKLRNAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
DV +GV E LN F H I T PF TL+Y S++G + GE
Sbjct: 122 DVKLGVLKEEADELNRVFFHYIATKTPFVTLKYASSLDGKIATATGE 168
>gi|423425451|ref|ZP_17402482.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG3X2-2]
gi|423436850|ref|ZP_17413831.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG4X12-1]
gi|423503948|ref|ZP_17480540.1| riboflavin biosynthesis protein RibD [Bacillus cereus HD73]
gi|449090304|ref|YP_007422745.1| riboflavin biosynthesis protein RibD [Bacillus thuringiensis
serovar kurstaki str. HD73]
gi|401111942|gb|EJQ19823.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG3X2-2]
gi|401122586|gb|EJQ30373.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG4X12-1]
gi|402458061|gb|EJV89814.1| riboflavin biosynthesis protein RibD [Bacillus cereus HD73]
gi|449024061|gb|AGE79224.1| riboflavin biosynthesis protein RibD [Bacillus thuringiensis
serovar kurstaki str. HD73]
Length = 367
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 181/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAEEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ KI++ P
Sbjct: 299 ----ASFIENKLMDKIILYFAP 316
>gi|365159928|ref|ZP_09356103.1| riboflavin biosynthesis protein RibD [Bacillus sp. 7_6_55CFAA_CT2]
gi|363624459|gb|EHL75531.1| riboflavin biosynthesis protein RibD [Bacillus sp. 7_6_55CFAA_CT2]
Length = 367
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 181/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAEEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ KI++ P
Sbjct: 299 ----ASFIENKLMDKIILYFAP 316
>gi|416149299|ref|ZP_11602819.1| pyrimidine deaminase [Acinetobacter baumannii AB210]
gi|333364551|gb|EGK46565.1| pyrimidine deaminase [Acinetobacter baumannii AB210]
Length = 361
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 135/186 (72%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFALRQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L++AGI
Sbjct: 65 EQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG + L+ S++G GE +G Q +
Sbjct: 125 EVEIGICEDLAAQLNQGFLKAMSTGMQYVRLKVASSLDGRTAMASGESKWITGSAARQDV 184
Query: 255 QEYDAI 260
Q + AI
Sbjct: 185 QHWRAI 190
>gi|290968502|ref|ZP_06560041.1| riboflavin biosynthesis protein RibD [Megasphaera genomosp. type_1
str. 28L]
gi|290781498|gb|EFD94087.1| riboflavin biosynthesis protein RibD [Megasphaera genomosp. type_1
str. 28L]
Length = 378
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 178/310 (57%), Gaps = 20/310 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM++ + LA A+G TSPNP+VGCVIVKDG+IVG G+H +AG PHAEV AL++AG+ A G
Sbjct: 6 YMKKALALAKIALGYTSPNPVVGCVIVKDGEIVGTGYHHQAGAPHAEVLALQEAGDRATG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC HYGRTPPC L++ K+KKVV+ MLDPNP+V KG LR AGI V VG
Sbjct: 66 ATVYVTLEPCAHYGRTPPCARTLVQHKIKKVVIAMLDPNPLVAGKGAAILRQAGIVVEVG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY---YSQLLQE 256
+ +LNE FI +++ PF ++ S++G + + G + + Y Q L+
Sbjct: 126 LLSAEAVKLNEVFIKNMLSNIPFIAIKLAQSLDGCIATRTGHSQWITNAWSRQYGQYLRS 185
Query: 257 -YDAIILSASSTKK----YSIPASQEPDA--NQPFRIITVSNHASPIRIPGLSEESSSKV 309
YD I++ ++ + + +E A +QP RI+ + +P+ ++++++ +
Sbjct: 186 IYDGILVGINTILEDNPLLTCRVRREGQAVPHQPIRIVLDTYGRTPLSSQVVNDKTARTI 245
Query: 310 IVFT------DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD----LRG 359
I+ T E + + T N ++L A L G S+LV+ + G
Sbjct: 246 IMTTAQCPQEKKEALLAAGVTVLTAPTANTGCVDLHAALQLLRQEGIGSILVEGGSTIHG 305
Query: 360 NYGDLEMLLK 369
++ D +++ K
Sbjct: 306 SFFDAKLVDK 315
>gi|228973365|ref|ZP_04133953.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228786345|gb|EEM34336.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 358
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 181/320 (56%), Gaps = 25/320 (7%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A GA
Sbjct: 1 MKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+HYGRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV
Sbjct: 61 TIYVTLEPCSHYGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQE 256
+E K++NE F I+T +PF T++ ++++G + D E+ Q+ E
Sbjct: 121 CEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIV 311
AI++ A++ +K + P+ ++ P+ P RII S +RIP + + + +
Sbjct: 181 NAAILVGANTVQKDN-PSLTTRIPNGRNPIRIIL----DSTLRIPMEANVVTDGEAPTWI 235
Query: 312 FTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
FT + + G K T +NL +LD G S+L++ G
Sbjct: 236 FTTSNHAAKKKKALENAGVKVFVTSGEKHINLHEILDVLGQKGVSSLLIEGGGEVN---- 291
Query: 367 LLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 292 --ASFIENKLMNKLILYVAP 309
>gi|445412737|ref|ZP_21433294.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. WC-743]
gi|444766787|gb|ELW91046.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. WC-743]
Length = 370
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 123/184 (66%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M++ +ELA ST PNP VGCVIVKDG ++GEGFHP+AGQPHAEVFA+R AG
Sbjct: 17 DQVWMQKAIELAKLGQYSTRPNPNVGCVIVKDGVLIGEGFHPQAGQPHAEVFAMRQAGAS 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC HYGRTPPC + L++A V KV+V DPNP+V KG+E LR AGI V
Sbjct: 77 AKGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVIVACADPNPLVAGKGVEILRQAGIVV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV ++ +LN F+ + TG P+ L+ S++G GE +G Q +Q
Sbjct: 137 ETGVCEQQATQLNLGFLKAMATGLPYVRLKVASSLDGRTAMASGESKWITGAESRQDVQH 196
Query: 257 YDAI 260
+ AI
Sbjct: 197 WRAI 200
>gi|416892866|ref|ZP_11924190.1| RibD protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347814564|gb|EGY31213.1| RibD protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 374
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + + +PNP VGCV+VK+G+I+G+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DAEFMQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC HYGRTPPC + L+ A V+ V+ M DPNP+V KGL L DAGI+
Sbjct: 69 ARGATAYVTLEPCAHYGRTPPCAKGLVDAGVRNVIAAMCDPNPLVAGKGLGILADAGIES 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN+ F+ R+ TG+PF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLKENAEELNKGFLKRMRTGRPFVQLKLAMSIDGKTAMANGESKWITGAQARADVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA--------SQEPDA-------NQPFRIITVSNH 292
Y A ILS S T P+ QE A QP R+I S H
Sbjct: 189 YRAKASAILSTSQTVLADNPSLNVRWAELPQEVQACYAEQHLRQPVRVILDSAH 242
>gi|452750413|ref|ZP_21950162.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri NF13]
gi|452005670|gb|EMD97953.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri NF13]
Length = 367
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC EALIKA V +VV M DPNP V +GLE LR AGI++
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCAEALIKAGVGRVVAAMQDPNPQVTGRGLELLRSAGIEI 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G PF + +S++G GE +G Q
Sbjct: 124 ASGVLEAEARELNNGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 183
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 184 LRARSSVVLTGADT 197
>gi|403050685|ref|ZP_10905169.1| ribD [Acinetobacter bereziniae LMG 1003]
Length = 370
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/184 (51%), Positives = 123/184 (66%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M++ +ELA ST PNP VGCVIVKDG ++GEGFHP+AGQPHAEVFA+R AG
Sbjct: 17 DQVWMQKAIELAKLGQYSTRPNPNVGCVIVKDGVLIGEGFHPQAGQPHAEVFAMRQAGAS 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC HYGRTPPC + L++A V KV+V DPNP+V KG+E LR AGI V
Sbjct: 77 AKGATAYVTLEPCAHYGRTPPCAKGLVEAGVAKVIVACADPNPLVAGKGVEILRQAGIVV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV ++ +LN F+ + TG P+ L+ S++G GE +G Q +Q
Sbjct: 137 ETGVCEQQATQLNLGFLKAMATGLPYVRLKVASSLDGRTAMASGESKWITGAESRQDVQH 196
Query: 257 YDAI 260
+ AI
Sbjct: 197 WRAI 200
>gi|427414234|ref|ZP_18904424.1| riboflavin biosynthesis protein RibD [Veillonella ratti
ACS-216-V-Col6b]
gi|425714610|gb|EKU77613.1| riboflavin biosynthesis protein RibD [Veillonella ratti
ACS-216-V-Col6b]
Length = 415
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 177/321 (55%), Gaps = 44/321 (13%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R + LA +A G T PNPMVG V+VK+G+I+GEG+H KAG+ HAEV AL+ AGE
Sbjct: 18 DKQYMMRALTLAKRATGFTHPNPMVGAVVVKNGEIIGEGYHQKAGEAHAEVHALKAAGEN 77
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC HYG+TPPC + +I+A +K+VVVG++DPN +V KG++ +R+AGI+V
Sbjct: 78 AKGATLYVTLEPCAHYGKTPPCAKHVIEAGIKRVVVGLIDPNLLVAGKGIQMIREAGIEV 137
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG------VAESGGYY 250
T G+ + C +L E F+ I TGKPF TL+ +S++G + + G A G+
Sbjct: 138 TTGILESECAKLVEGFLTFIKTGKPFVTLKSAMSLDGKIATRTGHSQWITNETARMDGHK 197
Query: 251 SQLLQEYDAIILSASSTK--------KYSIPASQEPDANQPFRIITVSNHASPIRIPGLS 302
+ L +DAI+ + ++ + E +QP I+ S +P +
Sbjct: 198 LRAL--HDAILTGIGTVLSDNPSLNCRWQADDTNEHVVHQPDVIVLDSMGRTPTN-ANIF 254
Query: 303 EESSSKVIVFTD-----GEITVEPDMG------------TKGIETVNLH----------Q 335
++++ KV VF I D+G T IET + Q
Sbjct: 255 KQANRKVYVFVSSACETSRIKALEDVGAQVVILSDTTDTTDNIETADALATKQSGSAKVQ 314
Query: 336 LNLKAVLDYCYSHGFCSVLVD 356
L + A+L GF SVLV+
Sbjct: 315 LPIDAILTKLAELGFTSVLVE 335
>gi|67078030|ref|YP_245650.1| riboflavin biosynthesis protein
(diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Bacillus cereus E33L]
gi|66970336|gb|AAY60312.1| riboflavin biosynthesis protein
(diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Bacillus cereus E33L]
Length = 367
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 181/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEKSKKMNEVFNKYIMTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDVEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAEKRKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ P
Sbjct: 299 ----ASFIENKLMDKLILYFAP 316
>gi|406667030|ref|ZP_11074792.1| Riboflavin biosynthesis protein RibD [Bacillus isronensis B3W22]
gi|405385078|gb|EKB44515.1| Riboflavin biosynthesis protein RibD [Bacillus isronensis B3W22]
Length = 371
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 170/300 (56%), Gaps = 15/300 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D YM+ +ELA A G+T+PNP+VG VIVKDG IVG G H KAG+PHAEV A+ AG
Sbjct: 2 KTDQDYMQLALELAASARGNTNPNPLVGAVIVKDGVIVGTGLHRKAGEPHAEVHAVNMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E + AT YV+LEPC+HYG+TPPC + L ++ K+VVV DPNP V +G+ LRDAGI
Sbjct: 62 EHTKDATIYVTLEPCSHYGKTPPCAKLLKESGFKRVVVATEDPNPEVAGRGIRLLRDAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V VGV E ++LNE FIH ++T +PF ++ ++++G + G E+ G
Sbjct: 122 EVEVGVLQEEAQKLNERFIHNMLTERPFVVAKFAMTLDGKIATYNGHSQWITGEEARGDV 181
Query: 251 SQLLQEYDAIILSASST----KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+L E D I++ + K + + P R++ S +P+ +++ +
Sbjct: 182 HELRHEVDGILVGVQTVLNDNPKLTTRLKDDRQGRNPIRVVLDSTLKTPVD-AHIADTTE 240
Query: 307 SKVIVFT--DGEITVEPDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGN 360
++ I+ T D + + G+E + + + L++K +L + G +LV+ GN
Sbjct: 241 ARTIIVTSLDSDEEKAQQLERNGVEIIRVEKEKTGLHIKDMLKALFKKGITHLLVEGGGN 300
>gi|424045133|ref|ZP_17782699.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-03]
gi|408886787|gb|EKM25441.1| riboflavin biosynthesis protein RibD [Vibrio cholerae HENC-03]
Length = 374
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 183/342 (53%), Gaps = 36/342 (10%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+ AEGA
Sbjct: 18 MSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDKAEGA 77
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G + LRDAG++V VG+
Sbjct: 78 TAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEVQVGL 137
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAI 260
+ LN+ FI + TG P+ L+ S++G G+ + Q +Q Y A+
Sbjct: 138 LENEAIELNKGFIKFMQTGMPYVQLKMAASLDGQSALSNGQSQWITSPKARQDVQRYRAL 197
Query: 261 ---ILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRIPGLS 302
ILS S T + +P S + + QP R+I + L
Sbjct: 198 SGGILSTSKTVIDDNASLNVRWDDLPNSVKARYPQDEVRQPPRVILDRQFQLSDDLK-LF 256
Query: 303 EESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
++IV G+I P++ G Q++L A L S + L G
Sbjct: 257 NTDGERIIVSQGGDIA--PELDKNG-------QVDLAATLKAVASGTHINHLWVEAG--- 304
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 305 --ATLASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|398845171|ref|ZP_10602214.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM84]
gi|398253825|gb|EJN38939.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM84]
Length = 376
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 162/301 (53%), Gaps = 26/301 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K V +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 9 DAHYMARALELARKGVYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGER 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL DAGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLADAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF + +S++G GE +G +Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 257 YDA----IILSASS---------TKKYSIPASQEPDA----NQPFRIITVSNHASPIRIP 299
A ++ SA+S + + +E A P R++ + P+ P
Sbjct: 189 LRARSSVVLTSAASVLADNARMTVRGAELGLDEETTALALSRTPLRVLIDGHLRLPLDAP 248
Query: 300 GLSEESSSKVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLV 355
+ V D +P G E +NL ++L+A++ + G +L+
Sbjct: 249 FFQAGPALVVTAMGD-----DPRYAEAGHELLNLPGSNGHVDLQALMQVLAARGVNEILL 303
Query: 356 D 356
+
Sbjct: 304 E 304
>gi|423586219|ref|ZP_17562306.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD045]
gi|401230962|gb|EJR37467.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD045]
Length = 365
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/326 (36%), Positives = 184/326 (56%), Gaps = 33/326 (10%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPG 300
E AI++ A++ +K + P+ ++ P+ P RII V++ +P I
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTCIFT 244
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
S ++ K I + + V T G + +NLH++ LD G S+L++ G
Sbjct: 245 TSNHAAKKKIALENAGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLIEGGGE 296
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 297 VN------ASFIENKLMDKLILYVAP 316
>gi|169342987|ref|ZP_02864015.1| riboflavin biosynthesis protein RibD [Clostridium perfringens C
str. JGS1495]
gi|169298896|gb|EDS80970.1| riboflavin biosynthesis protein RibD [Clostridium perfringens C
str. JGS1495]
Length = 365
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 175/299 (58%), Gaps = 15/299 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVKDG+I+G+G+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGNHAEINAINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K K+VVVG LDPNP+V+ K ++ LR++GI+V
Sbjct: 62 TEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKSIKILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL--DQLGEGVA--ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + D + + +S +
Sbjct: 122 KVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKDFKSKWITNKKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L +S S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQSES 241
Query: 308 KVIVFTDG--EITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT + + KGIE + ++ ++N+ VL+ SVL++ GN
Sbjct: 242 KTLIFTTNKKDKIKNEKLKDKGIEVIEVNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|251792829|ref|YP_003007555.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus
NJ8700]
gi|247534222|gb|ACS97468.1| riboflavin biosynthesis protein RibD [Aggregatibacter aphrophilus
NJ8700]
Length = 374
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + + +PNP VGCV+VK+G+I+G+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DAEFMQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC HYGRTPPC + L+ A V+ V+ M DPNP+V KGL L DAGI+
Sbjct: 69 ARGATAYVTLEPCAHYGRTPPCAKGLVDAGVRIVIAAMCDPNPLVAGKGLGILADAGIES 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN+ F+ R+ TG+PF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLKENAEELNKGFLKRMRTGRPFVQLKLAMSIDGKTAMANGESKWITGAQARADVQQ 188
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
Y A ILS S T + +P E QP R+I S H
Sbjct: 189 YRAKASAILSTSQTVLADNPSLNVRWAELPQEVQSRYAEQHLRQPVRVILDSAH 242
>gi|433656955|ref|YP_007274334.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
parahaemolyticus BB22OP]
gi|432507643|gb|AGB09160.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
parahaemolyticus BB22OP]
Length = 374
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 186/346 (53%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG I+GEG+H +AG+PHAEV A+R AG+
Sbjct: 14 DFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G++ LR+AG++V
Sbjct: 74 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQC 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRIITVSNHASPIRI 298
Y A ILS S T + +P S + + QP R+I +
Sbjct: 194 YRAQSGGILSTSKTVMDDNASLNVRWDDLPQSVQAHYELTEVRQPARVILDRQQQLSDDL 253
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S E ++IV ++G++ + D K ++L LKAV H + V+
Sbjct: 254 KLFSTE-GERIIVSSEGDVCPQLDQSGK----IDL-AATLKAV---ATQHNINHLWVEAG 304
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 305 AT------LASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|386742760|ref|YP_006215939.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia stuartii MRSN 2154]
gi|384479453|gb|AFH93248.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia stuartii MRSN 2154]
Length = 371
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 129/196 (65%), Gaps = 3/196 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R +ELA K +TSPNP VGCVIV+DG+IVGEG+H KAG+PHAEV ALR AG
Sbjct: 3 EQDRIYMARALELAQKGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+H+GRTPPC EALI A V++VV M DPNP V +GL L AGI
Sbjct: 63 EKAKGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDPNPQVAGRGLYMLSQAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ GV E + LN F+ R+ T P+ L+ S++G + GE + +
Sbjct: 123 ETASGVLMEEAESLNRGFLKRMRTAFPYVQLKLAASLDGKTALESGESKWITSAAARQDV 182
Query: 252 QLLQEYDAIILSASST 267
Q+L+ + ILS SST
Sbjct: 183 QVLRAQASAILSTSST 198
>gi|417320588|ref|ZP_12107131.1| riboflavin-specific deaminase [Vibrio parahaemolyticus 10329]
gi|328472537|gb|EGF43400.1| riboflavin-specific deaminase [Vibrio parahaemolyticus 10329]
Length = 374
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 186/346 (53%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG I+GEG+H +AG+PHAEV A+R AG+
Sbjct: 14 DFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIIGEGYHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G++ LR+AG++V
Sbjct: 74 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQC 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRIITVSNHASPIRI 298
Y A ILS S T + +P S + + QP R+I +
Sbjct: 194 YRAQSGGILSTSKTVMDDNASLNVRWDDLPQSVQAHYELTEVRQPARVILDRQQKLSDDL 253
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S E ++IV ++G++ + D K ++L LKAV H + V+
Sbjct: 254 KLFSTE-GERIIVSSEGDVCPQLDQSGK----IDL-AATLKAV---ATQHNINHLWVEAG 304
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 305 AT------LASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|163789730|ref|ZP_02184167.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
pirimidine reductase) [Carnobacterium sp. AT7]
gi|159874952|gb|EDP69019.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
pirimidine reductase) [Carnobacterium sp. AT7]
Length = 351
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 192/368 (52%), Gaps = 46/368 (12%)
Query: 87 LATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSL 146
+A K G T+PNP+VG +IVK G+++G+G+H K GQPHAEV A+ A E GAT YV+L
Sbjct: 1 MARKGKGWTTPNPLVGAIIVKGGRVIGQGYHQKYGQPHAEVNAIASAKEDVTGATLYVTL 60
Query: 147 EPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCK 206
EPC+H+G+TPPC++ LI +K+VVVG LDPNP+V KG+ERLR GI+V GV +E +
Sbjct: 61 EPCSHFGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNGIEVVTGVLEEESQ 120
Query: 207 RLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ----LLQEYDAIIL 262
+LNE FI IVT +PF ++ +S++G + GE SG + L E I++
Sbjct: 121 KLNEIFIKYIVTKEPFVVMKNAMSLDGKIATVTGESQWISGESSRKQVHSLRHELAGIMV 180
Query: 263 SASSTKKYSIP-ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT-------- 313
+ K S+ ++ P RI+ S PI L+++ +K IV T
Sbjct: 181 GIETIIKDDPQLTSRTLNSRNPIRIVVDSQLRIPIASKVLTQQDKAKTIVATTRRANKEK 240
Query: 314 -------DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
D E+ V + G + ++LK ++ + G S+L++ N
Sbjct: 241 LDTLKQMDIEVLVTKEKGGR---------VDLKELMKLLGAKGIDSILLEGGAN------ 285
Query: 367 LLKEGIEQNLLQKIVVEVLPVWNGS-------DGGNPHTLLNSLGKRLILKNLQPKMSSQ 419
L +E+ ++ KI + P G +G H+L N+ + + P M +
Sbjct: 286 LNFSALEEGIVDKIQSYIAPKIIGGKEAKTAVEGAGVHSLKNAFQ----IDRMTPVMVGE 341
Query: 420 SIVLEGYL 427
+ +EGY+
Sbjct: 342 DLFVEGYI 349
>gi|422646401|ref|ZP_16709534.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330959948|gb|EGH60208.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 381
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 12 DVHYMARALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGEPHAEVHALRQAGEL 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 72 ARGATAYVTLEPCSHQGRTPPCADALVDAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 132 QCGVLESEARALNKGFLKRMETGRPYVRVKLAMSLDGRTAMASGESQWITGPEARSAVQR 191
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 192 LRAQSSVVLTGADT 205
>gi|332982092|ref|YP_004463533.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Mahella
australiensis 50-1 BON]
gi|332699770|gb|AEE96711.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Mahella australiensis 50-1 BON]
Length = 363
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 190/366 (51%), Gaps = 26/366 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
+M+R +ELA G+T+PNPMVG VIVK G+I+GEG+H KAG+PHAE+ ALR+AGE A
Sbjct: 5 IFMQRALELARMGWGTTNPNPMVGAVIVKGGRIIGEGYHKKAGEPHAEINALREAGEGAR 64
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G+T YV+LEPC+H+GRTPPC +AL+KA VK+VV+ M DPNP V +G+ LR AGI V
Sbjct: 65 GSTVYVTLEPCSHFGRTPPCADALVKAGVKEVVIAMEDPNPRVAGRGINALRQAGIKVIT 124
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQ 255
G+ ++ +RLNE FI I + PF + ++++G + G+ E Y +
Sbjct: 125 GIMEQEARRLNEVFIKYITSDMPFVIWKCAMTLDGKIATANGDSKWITNELSRQYVHWWR 184
Query: 256 EYDAIILSASSTKKYSIP--ASQEPDAN---QPFRIITVSNHASPIRIPGLSEESSSKVI 310
+ +L+ T P + P N QP RII S +P+ L+ E + ++
Sbjct: 185 YRVSAVLTGIGTVLADDPMLTVRLPHINIEKQPVRIIADSLAKTPLDSNVLNIEQAPTIM 244
Query: 311 VFT----DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
+ +I G I T +++L ++ + SVL++
Sbjct: 245 ATSWSADPSKIETFKSKGADVIITDGKDKVDLVQLMRELHKREIDSVLIE------GGPT 298
Query: 367 LLKEGIEQNLLQKIVVEVLPVWNGSDG-----GNPHTLLNSLGKRLILKNLQPKMSSQSI 421
L IE+ L+ K +V + P G G GN + + L + K +
Sbjct: 299 LAASAIEEGLVDKAMVFIAPKLIGGKGLSALSGNG---IARMADAWQLSGVSVKRFEDDV 355
Query: 422 VLEGYL 427
++EGYL
Sbjct: 356 LIEGYL 361
>gi|423550904|ref|ZP_17527231.1| riboflavin biosynthesis protein RibD [Bacillus cereus ISP3191]
gi|401188237|gb|EJQ95305.1| riboflavin biosynthesis protein RibD [Bacillus cereus ISP3191]
Length = 366
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 181/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFITIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAEKKKALENAGVKIFVTSGEKHINLYEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ P
Sbjct: 299 ----ASFIENELMDKLILYFAP 316
>gi|285019600|ref|YP_003377311.1| riboflavin biosynthesis protein RibD [Xanthomonas albilineans GPE
PC73]
gi|283474818|emb|CBA17317.1| probable riboflavin biosynthesis ribd oxidoreductase protein
[Xanthomonas albilineans GPE PC73]
Length = 369
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 174/336 (51%), Gaps = 32/336 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M + + LA + +T PNPMVGCVIV+D + VGEGFH +AG PHAEVFALR AGE
Sbjct: 8 DHRWMAQALRLAERGAYTTRPNPMVGCVIVRDDEQVGEGFHQRAGGPHAEVFALRAAGEY 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC HYGRTPPC ALI+A V +VVV M DP P VN G LR+AGI V
Sbjct: 68 ARGATAYVTLEPCAHYGRTPPCALALIEAGVARVVVAMADPFPQVNGGGFALLREAGIAV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ +E + LN F+ R+ G+P+ ++ S++G GE +G Q +Q
Sbjct: 128 QSGLMEEQARALNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGAAARQDVQR 187
Query: 257 YDA---IILSASSTKKYSIPA-----SQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
+ A ILS + T P + + P R++ + L + SK
Sbjct: 188 WRARAGAILSGAGTVLADDPVLTVRLGEATEVLPPLRVVLDAQ---------LRTLARSK 238
Query: 309 V------IVFTDGEITVEPDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLRGN 360
V ++ +V P + V LH+ L+L AVL + G V V+
Sbjct: 239 VRDGAAPTLYLHAPASVPPTLPNAEFAAVALHEGRLDLDAVLRLLAARGINEVQVEAGAT 298
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNP 396
G LL+ G ++ +++V + PV G D P
Sbjct: 299 LGG--ALLRAG----MVDEVLVYLAPVLLG-DAARP 327
>gi|153834818|ref|ZP_01987485.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
gi|148868746|gb|EDL67820.1| riboflavin biosynthesis protein RibD [Vibrio harveyi HY01]
Length = 374
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 183/351 (52%), Gaps = 46/351 (13%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+
Sbjct: 14 DFEMMSRALMLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+GATAYV+LEPC+HYGRTPPC E LI+AKV +VV M DPNP V +G + LRDAG++V
Sbjct: 74 TQGATAYVTLEPCSHYGRTPPCAEGLIEAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN+ FI + TG P+ L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPAS---QEP--DANQPFRIITVSNHASPIRI 298
Y A+ ILS S T + +P S Q P D QP R+I
Sbjct: 194 YRALSGGILSTSKTVIDDNASLNVRWEDLPKSVQTQYPQEDVRQPPRVI----------F 243
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-----DYCYSHGFCSV 353
S+ S + TDGE + G E Q++L A L +Y +H +
Sbjct: 244 DRQSQLSDDLKLFNTDGERIIVSQGGDMAPELDENGQIDLAATLRNVASEYHINHLWVEA 303
Query: 354 LVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L + I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 304 GATLASSL----------IKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|30021491|ref|NP_833122.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
cereus ATCC 14579]
gi|29897046|gb|AAP10323.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus
cereus ATCC 14579]
Length = 302
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 173/296 (58%), Gaps = 27/296 (9%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPG 300
E AI++ A++ +K + P+ ++ P+ P RII V++ +P I
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFT 244
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
S ++ K I + + V T G + +NLH++ LD G S+LV+
Sbjct: 245 TSNHAAKKKIALENAGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLVE 292
>gi|163803478|ref|ZP_02197350.1| hypothetical protein 1103602000439_AND4_19771 [Vibrio sp. AND4]
gi|159172738|gb|EDP57587.1| hypothetical protein AND4_19771 [Vibrio sp. AND4]
Length = 375
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 185/348 (53%), Gaps = 40/348 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+
Sbjct: 15 DFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDK 74
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+GATAYV+LEPC+HYGRTPPC E LIKAKV +VV DPNP V +G + LRDAG+DV
Sbjct: 75 TQGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCATEDPNPKVAGRGFQMLRDAGVDV 134
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ LN+ FI + TG P+ L+ S++G G+ + Q +Q
Sbjct: 135 QVGLLQSEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQR 194
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRII--TVSNHASPI 296
Y A+ ILS+S T + +P S + D QP R+I S + +
Sbjct: 195 YRALSGGILSSSKTVLADNASLNVRWDDLPKSVQTQYLKQDVRQPSRVIFDRQSQLSDDL 254
Query: 297 RIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
+ L ++IV G+I P++ G Q++L A L S + L
Sbjct: 255 K---LFNTDGERIIVRQGGDIC--PELDENG-------QIDLAATLKVVASECHINHLWV 302
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
G L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 303 EAG-----ATLASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 342
>gi|336315123|ref|ZP_08570035.1| riboflavin biosynthesis protein RibD [Rheinheimera sp. A13L]
gi|335880534|gb|EGM78421.1| riboflavin biosynthesis protein RibD [Rheinheimera sp. A13L]
Length = 374
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/226 (45%), Positives = 143/226 (63%), Gaps = 15/226 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA+K +T+PNP VG VIV+DG+IVGEG+H +AG PHAEVFALR + L
Sbjct: 7 DQHYMARAIELASKGRFTTAPNPNVGSVIVRDGEIVGEGYHRQAGGPHAEVFALRQSEHL 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+HYGRT PC AL+ A VKKV+V MLDPNP+V KG++ L+DAGI+V
Sbjct: 67 ASGATCYVTLEPCSHYGRTGPCALALVNAGVKKVIVAMLDPNPLVAGKGIQILKDAGIEV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GVAESGGYYSQ 252
VG+ +E + LN F+ R+ KP+ L+ S++G + G+ AES
Sbjct: 127 QVGLLEEKARALNPGFLSRMERQKPYIRLKLATSLDGRIALSNGKSQWISSAESRSDVQM 186
Query: 253 LLQEYDAIILSASS-----------TKKYSIPASQEPDANQPFRII 287
+ + A++ +A++ ++ +IP+ + QP RII
Sbjct: 187 MRAQSHAVLSTATTVLADNARLTVRSEGLAIPSLDDGSVRQPVRII 232
>gi|183601038|ref|ZP_02962531.1| hypothetical protein PROSTU_04659 [Providencia stuartii ATCC 25827]
gi|188019376|gb|EDU57416.1| riboflavin biosynthesis protein RibD [Providencia stuartii ATCC
25827]
Length = 371
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 129/196 (65%), Gaps = 3/196 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R +ELA K +TSPNP VGCVIV+DG+IVGEG+H KAG+PHAEV ALR AG
Sbjct: 3 EQDRIYMARALELAQKGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+H+GRTPPC EALI A V++VV M DPNP V +GL L AGI
Sbjct: 63 EKAKGATAYVTLEPCSHHGRTPPCAEALINAGVRRVVAAMQDPNPQVAGRGLYMLSQAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ GV E + LN F+ R+ T P+ L+ S++G + GE + +
Sbjct: 123 ETASGVLMEEAESLNRGFLKRMRTAFPYVQLKLAASLDGKTALESGESKWITSAAARQDV 182
Query: 252 QLLQEYDAIILSASST 267
Q+L+ + ILS SST
Sbjct: 183 QVLRAQASAILSTSST 198
>gi|156973476|ref|YP_001444383.1| pyrimidine deaminase [Vibrio harveyi ATCC BAA-1116]
gi|156525070|gb|ABU70156.1| hypothetical protein VIBHAR_01166 [Vibrio harveyi ATCC BAA-1116]
Length = 374
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 189/356 (53%), Gaps = 56/356 (15%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+
Sbjct: 14 DFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+GATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G + LRDAG++V
Sbjct: 74 TQGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGFQMLRDAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN+ FI + TG P+ L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLESEAIELNKGFIKFMQTGMPYIQLKMAASLDGQSALSNGQSQWITSPKARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPAS---QEP--DANQPFRIITVSNHASPIRI 298
Y A+ ILS S T + +P S Q P D QP R+I R
Sbjct: 194 YRALSCGILSTSKTVIDDNASLNVRWEDLPKSVQTQYPQEDVRQPPRVIF-------DRQ 246
Query: 299 PGLSEE-----SSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLD-----YCYSH 348
LS++ + + I+ + G V P++G G Q++L A L Y +H
Sbjct: 247 SQLSDDLKLFNTDGERIIVSQGSDMV-PELGENG-------QIDLAATLRNVASGYHINH 298
Query: 349 GFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
+ L + I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 299 LWVEAGATLASSL----------IKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|164687268|ref|ZP_02211296.1| hypothetical protein CLOBAR_00909 [Clostridium bartlettii DSM
16795]
gi|164603692|gb|EDQ97157.1| riboflavin biosynthesis protein RibD [Clostridium bartlettii DSM
16795]
Length = 370
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 153/246 (62%), Gaps = 8/246 (3%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
++D +YM++ +ELA +G+ +PNP+VGC+IVKDGK++GEG+H K G+PHAEV A+ A
Sbjct: 8 QEDNYYMKKALELAKLGIGAVNPNPLVGCIIVKDGKVIGEGYHMKFGEPHAEVNAINSAK 67
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E EGAT YV+LEPC+H+G+TPPC + L++ KVK+VV+ DPNP+V G+++L++AGI
Sbjct: 68 EDIEGATVYVTLEPCSHFGKTPPCADNLVRHKVKRVVICNNDPNPLVAGNGIKKLQNAGI 127
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+VT G+ +E +LNE F H I KP + +S++G + + E S ++
Sbjct: 128 EVTTGILEEEGLKLNEVFFHYIKNNKPLVISKTAISMDGKIATKHMESQWISNESCREMT 187
Query: 255 QEYD----AIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
EY AI++ ++ K + + + P RI+ +N P+ L ++ S
Sbjct: 188 HEYRNKYMAIMVGINTVLKDNPSLTSRIKNKKTRNPIRIVIDTNLKIPMN-SNLVNDNKS 246
Query: 308 KVIVFT 313
K I+FT
Sbjct: 247 KTIIFT 252
>gi|262373927|ref|ZP_06067204.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205]
gi|262310938|gb|EEY92025.1| riboflavin biosynthesis protein RibD [Acinetobacter junii SH205]
Length = 366
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 136/191 (71%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
+Q++ ++ ++M++ ++LA + ST PNP VGCVIVKDGKI+GEGFHPKAGQPHAEVFA
Sbjct: 5 IQDHLSENQYWMQQAIDLARRGQYSTKPNPNVGCVIVKDGKIIGEGFHPKAGQPHAEVFA 64
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
LR AGE A+ ATAYV+LEPC H+GRTPPC EAL+KA+VKKVVV DPNP+V KG++ L
Sbjct: 65 LRQAGENAKDATAYVTLEPCAHFGRTPPCAEALVKAQVKKVVVACSDPNPLVAGKGVKIL 124
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
+DAGI+V G+ DE K LN F+ + TG P+ L+ S++G GE +G
Sbjct: 125 QDAGIEVETGICDEEAKTLNFGFLKAMSTGLPYVRLKIASSLDGRTAMASGESKWITGTA 184
Query: 250 YSQLLQEYDAI 260
Q +Q + AI
Sbjct: 185 ARQDVQHWRAI 195
>gi|335049773|ref|ZP_08542759.1| riboflavin biosynthesis protein RibD [Megasphaera sp. UPII 199-6]
gi|333762268|gb|EGL39772.1| riboflavin biosynthesis protein RibD [Megasphaera sp. UPII 199-6]
Length = 378
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 174/310 (56%), Gaps = 20/310 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM++ + LA A+G TSPNP+VGCVIVKDG+IVG G+H +AG PHAEV AL++AG+ A G
Sbjct: 6 YMKKALALAKIALGYTSPNPVVGCVIVKDGEIVGTGYHHQAGAPHAEVLALQEAGDRATG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC HYGRTPPC L++ K+KKVV+ MLDPNP+V KG LR AGI V VG
Sbjct: 66 ATVYVTLEPCAHYGRTPPCARTLVQHKIKKVVIAMLDPNPLVAGKGAAILRQAGIVVEVG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY---YSQLLQE 256
+ +LNE FI +++ PF ++ S++G + + G + + Y Q L+
Sbjct: 126 LLSAEAVKLNEVFIKNMLSNIPFIAIKLAQSLDGCIATRTGHSQWITNAWSRQYGQYLRS 185
Query: 257 -YDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
YD I IL + + + +QP RI+ + +P+ ++++++ +
Sbjct: 186 IYDGILVGINTILEDNPLLTCRVRREGQVVPHQPIRIVLDTYGRTPLSSQVVNDKTARTI 245
Query: 310 IVFT------DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD----LRG 359
I+ T E + + T N ++L A L G S+LV+ + G
Sbjct: 246 IMTTAQCPQEKKEALLAAGVTVLTAPTANTGCVDLHAALQLLRQEGIGSILVEGGSTIHG 305
Query: 360 NYGDLEMLLK 369
++ D +++ K
Sbjct: 306 SFFDAKLVDK 315
>gi|284047735|ref|YP_003398074.1| riboflavin biosynthesis protein RibD [Acidaminococcus fermentans
DSM 20731]
gi|283951956|gb|ADB46759.1| riboflavin biosynthesis protein RibD [Acidaminococcus fermentans
DSM 20731]
Length = 371
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 148/246 (60%), Gaps = 17/246 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM+ ++LA KA G TSPNP+VGCVIV +G+IVG+G+H KAGQPHAE+ A+ DAG
Sbjct: 9 DEEYMQMALDLAEKARGCTSPNPLVGCVIVNPEGQIVGKGYHHKAGQPHAEIMAMADAGN 68
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
EG TAYV+LEPC+HYGRT PC EALI+A +KKVV DPNP V +G RL++AG++
Sbjct: 69 QVEGCTAYVTLEPCSHYGRTGPCCEALIRAGIKKVVAAADDPNPKVAGRGFARLQEAGVE 128
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYS 251
V GV + R NE F+H + TG+PF L+Y ++++G + G+ +S Y
Sbjct: 129 VVRGVLADKANRQNEVFMHWMKTGRPFVALKYAMTLDGKIATASGDSKWISNEQSRTYAH 188
Query: 252 QLLQEYDAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
+L YD I++ ++ + + + P RI+ S+ P+
Sbjct: 189 KLRSIYDCILVGKNTVLNDDPSLTCRLVEGKNPLRIVLDSHCQLPMDRK----------- 237
Query: 311 VFTDGE 316
VFTDGE
Sbjct: 238 VFTDGE 243
>gi|423656253|ref|ZP_17631552.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD200]
gi|401291372|gb|EJR97048.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD200]
Length = 365
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 181/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GATIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P RII S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRIIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT + + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAKKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 299 ----ASFIENKLMDKLILYVAP 316
>gi|422336378|ref|ZP_16417351.1| riboflavin biosynthesis protein ribD [Aggregatibacter aphrophilus
F0387]
gi|353346564|gb|EHB90849.1| riboflavin biosynthesis protein ribD [Aggregatibacter aphrophilus
F0387]
Length = 374
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + + +PNP VGCV+VK+G+I+G+GFH KAG+PHAEV ALR+AGE
Sbjct: 9 DAEFMQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGEPHAEVMALREAGEN 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC HYG+TPPC + L+ A V+ V+ M DPNP+V KGL L DAGI+
Sbjct: 69 ARGATAYVTLEPCAHYGQTPPCAKGLVDAGVRNVIAAMCDPNPLVAGKGLGILADAGIES 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN+ F+ R+ TG+PF L+ +S++G GE +G +Q+
Sbjct: 129 AVGLLKENAEELNKGFLKRMRTGRPFVQLKLAMSIDGKTAMANGESKWITGAQARADVQQ 188
Query: 257 YDA---IILSASSTKKYSIPA--------SQEPDA-------NQPFRIITVSNH 292
Y A ILS S T P+ QE A QP R+I S H
Sbjct: 189 YRAKASAILSTSQTVLADNPSLNVRWAELPQEVQARYAEQHLRQPVRVILDSAH 242
>gi|218710376|ref|YP_002417997.1| riboflavin biosynthesis protein RibD [Vibrio splendidus LGP32]
gi|218323395|emb|CAV19572.1| Riboflavin biosynthesis protein ribD [Vibrio splendidus LGP32]
Length = 374
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 186/347 (53%), Gaps = 37/347 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D M R ++LA + + +T+PNP VGCVIV+ DG+IVGEGFH KAG+ HAEV A+R AG+
Sbjct: 8 DFQMMSRAIKLAKRGIYTTAPNPNVGCVIVQTDGQIVGEGFHAKAGEAHAEVHAMRMAGD 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GA AYV+LEPC+HYGRTPPC E LIKA+V KV+ M DPNP V +G++ LRDA I+
Sbjct: 68 KAKGAIAYVTLEPCSHYGRTPPCAEGLIKAQVAKVICAMQDPNPKVAGRGIKMLRDACIE 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V +G+ ++ LN AFI R+ TG PF L+ S++G + G+ + + +Q
Sbjct: 128 VEIGLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSPEARRDVQ 187
Query: 256 EYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIR 297
Y A +LS S T + +P+S E + QP R+I +
Sbjct: 188 NYRAKSGAVLSTSQTVIEDNASLNVRWTELPSSIKEHYAEDELRQPIRVILDRQNQLYPE 247
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDL 357
+ +S + T +I V ET + QL+L ++ ++ + V+
Sbjct: 248 LKLFQTPTSVLRVAETSADIEV---------ETTDAGQLDLHDLMRQLPANHIDHIWVEA 298
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L K IE L+ ++++ + P GSDG L+ +LG
Sbjct: 299 GAT------LAKSLIEAQLVDELILYLAPKLMGSDG---RGLMGALG 336
>gi|398967295|ref|ZP_10681821.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM30]
gi|398144851|gb|EJM33663.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM30]
Length = 377
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+DG+IVGEGFH +AG+PHAEV ALR AGEL
Sbjct: 11 DAHFMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGFHERAGEPHAEVHALRAAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL DAGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMRDPNPQVAGRGLQRLADAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G Q
Sbjct: 131 ESGVLEAEARQLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 254 LQEYDAIILSASST 267
L+ A +L+ + T
Sbjct: 191 LRAQAAAVLTGADT 204
>gi|219849511|ref|YP_002463944.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM
9485]
gi|219543770|gb|ACL25508.1| riboflavin biosynthesis protein RibD [Chloroflexus aggregans DSM
9485]
Length = 409
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 184/353 (52%), Gaps = 29/353 (8%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YMRR + LA +A G TSPNPMVG VIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 6 DPETYMRRALVLAQQAAGRTSPNPMVGAVIVKDGRIVGEGYHRRAGEPHAEVEALRVAGE 65
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GAT YV+LEPC H GRTPPCT+A+I A + +V + DPNP+V+ KG +L AGI
Sbjct: 66 AARGATMYVTLEPCAHVGRTPPCTDAIIAAGITEVYYAIADPNPLVSGKGHAQLAAAGIR 125
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYS 251
V GV + LN F I TG+PF T ++ +S++G + +G+ A +
Sbjct: 126 VQCGVCEAEAFELNRPFFKHITTGRPFVTAKFAMSLDGKIATVIGQSRWISNAAARRRVH 185
Query: 252 QLLQEYDAIILSASS------TKKYSIPASQEPDANQPFRIITVSNHASPIR-------I 298
L DA+++ A + + +P P RI+ S P+ +
Sbjct: 186 HLRNRTDAVLVGAGTVIADDPSLTTRLPDLSPDSIRHPLRIVADSRGRVPLSAKVFDPDL 245
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
PG + +++++I VE + + + ++ L A+ D G SVLV+
Sbjct: 246 PGQTVVATTELIPADHRRALVERGVDVWLLPASDDGRVRLSALFDELGRRGMLSVLVE-- 303
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD------GGNPHTLLNSLGK 405
G E LL + L+ ++ V + P+ G GG+ + LL+ +
Sbjct: 304 ---GGSE-LLGACFCERLIDRVWVFMAPLIIGGQHAPGPVGGSGYALLSQAAR 352
>gi|423412878|ref|ZP_17389998.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG3O-2]
gi|423431337|ref|ZP_17408341.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG4O-1]
gi|401102438|gb|EJQ10424.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG3O-2]
gi|401118362|gb|EJQ26194.1| riboflavin biosynthesis protein RibD [Bacillus cereus BAG4O-1]
Length = 367
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 180/322 (55%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSGSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAEEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ KI++ P
Sbjct: 299 ----ASFIENKLMDKIILYFAP 316
>gi|328956808|ref|YP_004374194.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Carnobacterium sp. 17-4]
gi|328673132|gb|AEB29178.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Carnobacterium sp. 17-4]
Length = 355
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 194/360 (53%), Gaps = 24/360 (6%)
Query: 84 CVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAY 143
++LA K G T+PNP+VG VIVK G+++G+G+H K GQPHAEV A+ A + GAT Y
Sbjct: 2 ALDLARKGKGWTTPNPLVGAVIVKGGRVIGQGYHQKYGQPHAEVNAIVSAKKDVTGATLY 61
Query: 144 VSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDE 203
V+LEPC+H+G+TPPC++ LI +K+VVVG LDPNP+V KG+ERLR GI+V GV +E
Sbjct: 62 VTLEPCSHFGKTPPCSDLLIDKNIKRVVVGTLDPNPLVAGKGIERLRSNGIEVVTGVLEE 121
Query: 204 LCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ----LLQEYDA 259
++LNE FI IVT +PF ++ +S++G + GE SG + L E
Sbjct: 122 ESQKLNEIFIKYIVTKEPFVVMKNAMSLDGKIATVTGESQWISGESSRKQVHSLRHELAG 181
Query: 260 IILSASSTKKYSIP-ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDGEIT 318
I++ + K S+ ++ P RI+ S PI L+++ +K IV T
Sbjct: 182 IMVGIETIIKDDPQLTSRTLNSRNPIRIVVDSQLRIPIASKVLTQQDKAKTIVATTKRAN 241
Query: 319 VEP--DMGTKGIETV----NLHQLNLKAVLDYCYSHGFCSVLVDLRG--NYGDLEMLLKE 370
E + GIE + +++L+ ++ + G S+L++ N+ LE E
Sbjct: 242 NEKLETLKQMGIEVIVTKEKYGRVDLQELMKVVGAKGIDSILLEGGATLNFSALE----E 297
Query: 371 GIEQNLLQKIVVEVL---PVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
GI + I +++ +G H+L ++ + + P M + + +EGY+
Sbjct: 298 GIVDKIQSYIAPKIIGGKEAKTAVEGAGVHSLKSAFQ----IDRMTPVMVGEDLFVEGYI 353
>gi|262274779|ref|ZP_06052590.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Grimontia hollisae CIP 101886]
gi|262221342|gb|EEY72656.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Grimontia hollisae CIP 101886]
Length = 373
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/334 (36%), Positives = 175/334 (52%), Gaps = 25/334 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + + +T+PNP VGCVI + IVGEGFH +AG+PHAEV+ALR AGE
Sbjct: 6 DSQMMLRAIELAKRGIYTTAPNPNVGCVITQGDDIVGEGFHFRAGEPHAEVYALRAAGEK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M+DPNP V +G++R+RDAGI V
Sbjct: 66 ACGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVCAMVDPNPKVAGRGIQRMRDAGIQV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ +G +Q
Sbjct: 126 DVGLMQAQAEALNPGFIKVMKTGLPFVQLKLASSIDGRTALANGQSQWITGAEARADVQV 185
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + +P + Q+ D QP R+I ++
Sbjct: 186 FRAQAGAILSTSQTVLDDNPSLNVRWAQLPETVKSVYQQDDVRQPVRVILDTHRKVSDSA 245
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S + ++ D + +V + +E + H LNL + L + G + V+
Sbjct: 246 TLFSLDGDIIIVTAKDDKPSVNESVTVLTVEQQDGH-LNLNSTLRALAAKGIHHIWVEAG 304
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD 392
LL G L+ +++V P GSD
Sbjct: 305 ATLAG--SLLNAG----LVDEVIVYQAPKLMGSD 332
>gi|374622527|ref|ZP_09695051.1| riboflavin biosynthesis protein RibD [Ectothiorhodospira sp. PHS-1]
gi|373941652|gb|EHQ52197.1| riboflavin biosynthesis protein RibD [Ectothiorhodospira sp. PHS-1]
Length = 369
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 160/285 (56%), Gaps = 17/285 (5%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + + +T PNP VGCV+V+DG ++GEGFH +AG+PHAEV AL AGE A GA
Sbjct: 1 MGRALQLARRGLYTTDPNPRVGCVVVRDGHVLGEGFHVRAGEPHAEVLALAHAGEAARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +AL++A V +VVV M DPNP+V +GLERLR+AG+ V VG+
Sbjct: 61 TAYVTLEPCSHHGRTPPCVDALLRAGVGRVVVAMTDPNPLVAGRGLERLREAGVAVAVGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
+ + LN F+ R+ G+P+ ++ S++G GE E+ Q L+
Sbjct: 121 MESEARALNPGFVSRMERGRPWVRVKLAASLDGRTAMASGESRWITGEAARRDVQFLRAR 180
Query: 258 DAIILSASSTKKYSIP------ASQEPDANQPFR--IITVSNHASPIRIPGLSEESSSKV 309
+ IL+ T + P +++ D + P R + V + + ++ V
Sbjct: 181 ASAILTGMGTVRADDPRLDVRLSAEALDVDGPVRQPLRVVLDREGRLTAAARLFQTEGPV 240
Query: 310 IVFTDGEITVEPDMGTKGIE------TVNLHQLNLKAVLDYCYSH 348
+V TD E + TV+ L+L AV++ H
Sbjct: 241 LVLTDPEALARQTRDLADVNARVEAVTVSRGHLDLPAVMNLLARH 285
>gi|422633294|ref|ZP_16698440.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. pisi str. 1704B]
gi|330943560|gb|EGH45897.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 245
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|350530421|ref|ZP_08909362.1| pyrimidine deaminase [Vibrio rotiferianus DAT722]
Length = 374
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 182/346 (52%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG+IVGEG H +AG+PHAEV A+R AG+
Sbjct: 14 DFEMMSRALKLAKRGIYTTAPNPNVGCVIVRDGEIVGEGHHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+H+GRTPPC E LIKAKV +V+ M DPNP V +G + LRDAG++V
Sbjct: 74 AEGATAYVTLEPCSHFGRTPPCAEGLIKAKVARVICAMEDPNPKVAGRGFQMLRDAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN+ FI + TG P+ L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLESEAIDLNKGFIKFMQTGMPYVQLKMAASLDGQSALNNGQSQWITSPKARQDVQR 193
Query: 257 YDAI---ILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
Y A+ ILS S T + +P S + + QP R+I +
Sbjct: 194 YRALSGGILSTSKTVIDDNASLNVRWDELPCSVQTQYSQDEVRQPPRVI----------L 243
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
S+ + + TDGE + G E Q++L L S + L
Sbjct: 244 DRQSQLNDDLKLFNTDGERIIVSQGGDMAPELDENGQIDLATTLKAVASEYHINHLWVEA 303
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
G L I+ NL+ +++V + P GSDG L+ +LG
Sbjct: 304 G-----ATLASSLIKANLVDELIVYLAPKLMGSDG---RGLIGALG 341
>gi|325577912|ref|ZP_08148145.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
ATCC 33392]
gi|325160342|gb|EGC72469.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
ATCC 33392]
Length = 376
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 142/235 (60%), Gaps = 18/235 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M+ +ELA K +T+PNP VGCV+VK+G+IVG+GFH KAGQPHAE AL DAGE
Sbjct: 8 DDVKFMQLALELAAKGQYTTTPNPSVGCVLVKNGEIVGKGFHFKAGQPHAERMALADAGE 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GATAYV+LEPC+HYGRTPPC LI+A V +VV M DPNP V KGL+ L DAGI
Sbjct: 68 KAKGATAYVTLEPCSHYGRTPPCALGLIEAGVSRVVAAMADPNPQVAGKGLKMLADAGIP 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V + +E + LN+ F+ R+ TGKP+ L+ +S++G GE E+ Q
Sbjct: 128 TAVNLLNEQAEALNKGFLKRMRTGKPYVQLKLAMSLDGRTAMASGESKWITGEAARADVQ 187
Query: 253 LLQEYDAIILSASSTKKYSIPA-----SQEPD----------ANQPFRIITVSNH 292
++ +LS S+T P+ +Q PD QP R+I S +
Sbjct: 188 KMRAKSTALLSTSATVLADDPSLNVRWNQFPDDLKTEYAEETVRQPIRVILDSKN 242
>gi|422640736|ref|ZP_16704162.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae Cit 7]
gi|440742672|ref|ZP_20921995.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP39023]
gi|330953126|gb|EGH53386.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae Cit 7]
gi|440376976|gb|ELQ13633.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP39023]
Length = 378
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A V +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGVTRVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|398977344|ref|ZP_10687061.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM25]
gi|398138088|gb|EJM27118.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM25]
Length = 377
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 11 DAHFMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGEPHAEVHALRAAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL DAGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVGRVVAAMRDPNPQVAGRGLQRLADAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEAEARKLNQGFLKRMEHGSPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|228959585|ref|ZP_04121266.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228800077|gb|EEM47013.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 358
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 184/324 (56%), Gaps = 33/324 (10%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G
Sbjct: 1 MKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQARGG 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV
Sbjct: 61 TIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--QLLQE 256
+E K++NE F I+T +PF T++ ++++G + + + +G Q+ E
Sbjct: 121 CEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTGARQEVHQIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPGLS 302
AI++ A++ +K + P+ ++ P+ P RII V++ +P I S
Sbjct: 181 NAAILVGANTVQKDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFTTS 239
Query: 303 EESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
++ K I + + V T G + +NLH++ LD G S+LV+ G
Sbjct: 240 NHAAKKKIALENAGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLVEGGGEVN 291
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 292 ------ASFIENKLMDKLILYVAP 309
>gi|229103925|ref|ZP_04234603.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28]
gi|228679493|gb|EEL33692.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-28]
Length = 360
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 180/316 (56%), Gaps = 17/316 (5%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G
Sbjct: 1 MKLALENANAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQARGG 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV
Sbjct: 61 TIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKVLQDAGIEVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQE 256
+E K++NE F I+T +PF T++ ++++G + L + E+ Q+ E
Sbjct: 121 CEEESKKMNEVFNKYIMTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
AI++ A++ +K + P+ ++ P+ P R+I S P++ +++E + I T
Sbjct: 181 NAAILVGANTVQKDN-PSLTTRIPNGRNPIRVILDSTLRIPMKANVVTDEEAPTWIFTTS 239
Query: 315 GEITVEP----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
+ + G K T +NL +LD G S+L++ G
Sbjct: 240 NHAEEKKKALENAGVKVFVTSGEKHINLYEMLDVLGQKGVSSLLIEGGGEVN------AS 293
Query: 371 GIEQNLLQKIVVEVLP 386
IE L+ K+++ P
Sbjct: 294 FIENELMDKLILYFAP 309
>gi|228986473|ref|ZP_04146609.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228773294|gb|EEM21724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 358
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 180/320 (56%), Gaps = 25/320 (7%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G
Sbjct: 1 MKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQARGG 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+++A +K+VVV LDPNP+V+ +G++ L+DAGIDV VGV
Sbjct: 61 TIYVTLEPCSHHGRTGPCAEAIVQAGIKRVVVATLDPNPLVSGRGIQILQDAGIDVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQE 256
+E K++NE F I+T +PF T++ ++++G + L + E+ Q+ E
Sbjct: 121 CEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIV 311
AI++ ++ +K + P+ ++ P+ P R+I S +RIP + + + +
Sbjct: 181 NAAILVGVNTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDGEAPTWI 235
Query: 312 FTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
FT E + G K T +NL +LD G S+L++ G
Sbjct: 236 FTTNNHAAEKKKALENAGVKVFVTSGEKHINLYEMLDVLGQKGISSLLIEGGGEVN---- 291
Query: 367 LLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 292 --ASFIENKLMDKLILYVAP 309
>gi|282850242|ref|ZP_06259621.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC
17745]
gi|282579735|gb|EFB85139.1| riboflavin biosynthesis protein RibD [Veillonella parvula ATCC
17745]
Length = 403
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 118/166 (71%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM+R +ELA A G TSPNP+VG V+VKD I+GEG+H KAG HAEV AL AG+
Sbjct: 2 DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAGD 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYG+TPPC +I+A + KV+VG DPNP+V+ KG+E LR+AGI+
Sbjct: 62 NAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGMELLREAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V V + C LNE F I TGKPF TL+ +S++G + G+
Sbjct: 122 VVCPVCSDECAELNEHFFTYIQTGKPFVTLKSAMSLDGKIATSTGQ 167
>gi|398852092|ref|ZP_10608761.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM80]
gi|398244968|gb|EJN30500.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM80]
Length = 377
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 11 DAHFMARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHERAGEPHAEVHALRAAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL DAGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMRDPNPQVAGRGLQRLADAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G Q
Sbjct: 131 ESGVLEAEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMENGESQWITGPAARSAVQR 190
Query: 254 LQEYDAIILSASST 267
L+ A++L+ + T
Sbjct: 191 LRAQAAVVLTGADT 204
>gi|302189350|ref|ZP_07266023.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
syringae 642]
Length = 378
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARAIELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESESRALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|52142146|ref|YP_084683.1| riboflavin biosynthesis protein;
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bacillus cereus E33L]
gi|51975615|gb|AAU17165.1| riboflavin biosynthesis protein;
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Bacillus cereus E33L]
Length = 367
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 182/322 (56%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQAC 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFITIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAEKKKALENAGVKIFVTSGEKHINLYEMLDVLGGKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ + P
Sbjct: 299 ----ASFIENKLIDKLILYIAP 316
>gi|444377320|ref|ZP_21176552.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Enterovibrio
sp. AK16]
gi|443678610|gb|ELT85278.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Enterovibrio
sp. AK16]
Length = 372
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 176/334 (52%), Gaps = 26/334 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + + +T+PNP VGCV+ + IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 6 DSQMMLRAIELAKRGIYTTAPNPSVGCVVTQGDDIVGEGFHFRAGEPHAEVHALRAAGEN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC +ALI A V +VV M+DPNP V +G++R+RD GI V
Sbjct: 66 AKGATAYVTLEPCSHYGRTPPCADALIAAGVSRVVCAMVDPNPKVAGRGIQRMRDEGIQV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ +G +Q
Sbjct: 126 DVGLMQAQAEALNPGFIKVMKTGLPFVQLKLASSLDGRTALANGQSKWITGDEARADVQV 185
Query: 257 YDA---IILSASST-----KKYSIPASQEPDANQPFRIITVSNHASPIR-IPGLSEESSS 307
+ A ILS S T ++ Q PDA + N P+R I +
Sbjct: 186 FRAQAGAILSTSQTVLDDNPSLNVRWEQLPDAVKAQ--YAQDNLRQPVRVILDTQRKVKD 243
Query: 308 KVIVFT-DGE-ITVEPDMGTKGIETVNL-------HQLNLKAVLDYCYSHGFCSVLVDLR 358
+F+ DGE I V G +TV L QL+L + L SHG + V+
Sbjct: 244 DAHLFSLDGEVIIVTASHADSGNDTVKLLTVAKEAGQLDLNSALRALASHGINHIWVEAG 303
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD 392
LLK G L+ ++++ P GSD
Sbjct: 304 ATLAG--SLLKAG----LVDELIIYQAPKLMGSD 331
>gi|422346938|ref|ZP_16427851.1| riboflavin biosynthesis protein RibD [Clostridium perfringens
WAL-14572]
gi|373225555|gb|EHP47888.1| riboflavin biosynthesis protein RibD [Clostridium perfringens
WAL-14572]
Length = 366
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 173/299 (57%), Gaps = 15/299 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVK G+I+G+G+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGNHAEINAINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K K+VVVG LDPNP+V+ KG+ LR++GI+V
Sbjct: 62 IEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKGIRILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + + + +S +
Sbjct: 122 NVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKEFKSKWITNRKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L +S S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQSES 241
Query: 308 KVIVFTDG--EITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT + + KGIE + ++ ++N+ VL+ SVL++ GN
Sbjct: 242 KTLIFTTNKKDKIKNEKLKDKGIEVIEVNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|294791895|ref|ZP_06757043.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27]
gi|294457125|gb|EFG25487.1| riboflavin biosynthesis protein RibD [Veillonella sp. 6_1_27]
Length = 404
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 118/166 (71%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM+R +ELA A G TSPNP+VG V+VKD I+GEG+H KAG HAEV AL AG+
Sbjct: 3 DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAGD 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYG+TPPC +I+A + KV+VG DPNP+V+ KG+E LR+AGI+
Sbjct: 63 NAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGMELLREAGIE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V V + C LNE F I TGKPF TL+ +S++G + G+
Sbjct: 123 VVCPVCSDECAELNEHFFTYIQTGKPFVTLKSAMSLDGKIATSTGQ 168
>gi|110802102|ref|YP_697858.1| riboflavin biosynthesis protein RibD [Clostridium perfringens
SM101]
gi|110682603|gb|ABG85973.1| riboflavin biosynthesis protein RibD [Clostridium perfringens
SM101]
Length = 365
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 173/299 (57%), Gaps = 15/299 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVK G+I+GEG+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGEGYHEFFGGDHAEINAINSSVKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K K VVVG LDPNP+V+ G++ LR+AGI+V
Sbjct: 62 TEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKTVVVGTLDPNPLVSGNGIKILREAGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL--DQLGEGVA--ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + D + + +S +
Sbjct: 122 KVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKDFKSKWITNKKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L +S S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLKIPLDSEILKNQSES 241
Query: 308 KVIVFTDG--EITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT + + KGIE + ++ ++N+ VL+ SVL++ GN
Sbjct: 242 KTLIFTTNKKDKIKNEKLKDKGIEVIEVNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|398983667|ref|ZP_10690131.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM24]
gi|399012350|ref|ZP_10714674.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM16]
gi|398115912|gb|EJM05685.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM16]
gi|398156839|gb|EJM45251.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM24]
Length = 377
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 11 DAHFMARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHERAGEPHAEVHALRAAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL DAGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVGRVVAAMRDPNPQVAGRGLQRLTDAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G Q
Sbjct: 131 ESGVLEAEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 254 LQEYDAIILSASST 267
L+ A++L+ + T
Sbjct: 191 LRAQAAVVLTGADT 204
>gi|220931842|ref|YP_002508750.1| riboflavin biosynthesis protein RibD [Halothermothrix orenii H 168]
gi|219993152|gb|ACL69755.1| riboflavin biosynthesis protein RibD [Halothermothrix orenii H 168]
Length = 366
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 184/334 (55%), Gaps = 24/334 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM + + LA K VG TSPNPMVG V+V+D KIVGEG H G PHAEV+AL +AGE
Sbjct: 4 DIYYMEKALTLARKGVGYTSPNPMVGAVVVRDDKIVGEGHHRYYGGPHAEVYALEEAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A G+T YV+LEPC+HYG+TPPC +I++ VK+VV+ M+DPNP V+ KG+E L+ AGI+V
Sbjct: 64 AFGSTLYVNLEPCSHYGKTPPCVFKIIESGVKRVVISMVDPNPRVSGKGIEMLKKAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
TVGV +E + LNE FI I PF L+ +++G++ G+ +G Y +
Sbjct: 124 TVGVLEEKARNLNEVFIKNITNRMPFVYLKMAQTLDGYLATSSGDSRWVTGKKARQYVHR 183
Query: 253 LLQEYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L DAI++ + K + + +I+ S P+ L++E+ + V
Sbjct: 184 LRHRVDAILVGIGTVLKDDPRLTTRLSDGKGKDSIKIVLDSKLKIPLTANILNQENDAPV 243
Query: 310 IVFTDGEI---TVEPDMGTKGIETVNLH-----QLNLKAVLDYCYSHGFCSVLVDLRG-- 359
I+ + + K +E ++L Q+ +K +L G S+LV+ G
Sbjct: 244 IIVCGHRVDSHKKKSLKQLKSVEVLSLDLNEYGQIPIKELLINLNKKGISSLLVEGGGRV 303
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
NY LKEG +L I ++L GSDG
Sbjct: 304 NYS----FLKEGFVDKMLFFIAPKLL---GGSDG 330
>gi|440719582|ref|ZP_20900008.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP34876]
gi|440727121|ref|ZP_20907362.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase,
C-terminal [Pseudomonas syringae BRIP34881]
gi|440364695|gb|ELQ01818.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase,
C-terminal [Pseudomonas syringae BRIP34881]
gi|440367718|gb|ELQ04775.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae
BRIP34876]
Length = 378
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|229047052|ref|ZP_04192675.1| Riboflavin biosynthesis protein [Bacillus cereus AH676]
gi|228724291|gb|EEL75625.1| Riboflavin biosynthesis protein [Bacillus cereus AH676]
Length = 358
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 183/324 (56%), Gaps = 33/324 (10%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE GA
Sbjct: 1 MKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVRGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV
Sbjct: 61 TIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQE 256
+E K++NE F I+T +PF T++ ++++G + D E+ Q+ E
Sbjct: 121 CEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPGLS 302
AI++ A++ +K + P+ ++ P+ P RII V++ +P I S
Sbjct: 181 NAAILVGANTVQKDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFTTS 239
Query: 303 EESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
++ K I + + V T G + +NLH++ LD G S+L++ G
Sbjct: 240 NHAAKKKIALENAGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLIEGGGEVN 291
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ V P
Sbjct: 292 ------ASFIENKLMDKLILYVAP 309
>gi|386019403|ref|YP_005937427.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
4166]
gi|327479375|gb|AEA82685.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
4166]
Length = 366
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC EAL+KA V +VV M DPNP V GLERLR AGI+V
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRSAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F R+ +G P+ + +S++G GE +G Q
Sbjct: 124 ASGVLEGEARELNAGFTKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 183
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 184 LRARSSVVLTGADT 197
>gi|375130161|ref|YP_004992261.1| riboflavin biosynthesis protein RibD [Vibrio furnissii NCTC 11218]
gi|315179335|gb|ADT86249.1| riboflavin biosynthesis protein RibD [Vibrio furnissii NCTC 11218]
Length = 369
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 175/336 (52%), Gaps = 34/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI + IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 8 DYQMMSRAIKLAQRGRFTTAPNPNVGCVITQGESIVGEGFHFRAGEPHAEVHALRMAGEQ 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+HYGRTPPC E LIKA V +V+ M DPNP V +G++ LR+AGI+V
Sbjct: 68 SVGATAYVTLEPCSHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGIDMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN AFI R+ TG P+ L+ S++G G + Q +Q
Sbjct: 128 QVGLLEADALALNPAFIKRMKTGMPWVQLKMAASLDGQTALANGRSQWITSPQARQDVQA 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
Y A +LS S T + +PA E QP R I H +
Sbjct: 188 YRAQAGAVLSTSQTVLADNASLTVRWQDLPAHVQATYAEQHLRQPVRAILDRQHQLHREL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
+ +S+ + D ++ V D +G QLNL+ VL H + V+
Sbjct: 248 TLYATDSAVLRVANQDADVCVALD--EQG-------QLNLREVLGALAKHHNINHIWVEA 298
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K +EQ+L+ ++VV + P GSDG
Sbjct: 299 GAT------LAKSLLEQDLVDELVVYLAPKIMGSDG 328
>gi|403057497|ref|YP_006645714.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402804823|gb|AFR02461.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 378
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 141/239 (58%), Gaps = 28/239 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 13 DELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAGER 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 73 ARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAV 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 133 SHGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 192
Query: 257 Y---DAIILSASST--------------------KKYSIPASQEPDANQPFRIITVSNH 292
+ A ILS+S+T K+YS E D QP R+I S
Sbjct: 193 FRAESAAILSSSATVLADDPSLTVRWSELGADVQKRYS-----EADLRQPVRVIVDSQQ 246
>gi|227113442|ref|ZP_03827098.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 378
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 141/239 (58%), Gaps = 28/239 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 13 DELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAGER 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 73 ARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAV 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 133 SHGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 192
Query: 257 Y---DAIILSASST--------------------KKYSIPASQEPDANQPFRIITVSNH 292
+ A ILS+S+T K+YS E D QP R+I S
Sbjct: 193 FRAESAAILSSSATVLADDPSLTVRWSELGADIQKRYS-----EADLRQPVRVIVDSQQ 246
>gi|51246637|ref|YP_066521.1| riboflavin biosynthesis protein (RibD) [Desulfotalea psychrophila
LSv54]
gi|50877674|emb|CAG37514.1| probable riboflavin biosynthesis protein (RibD) [Desulfotalea
psychrophila LSv54]
Length = 401
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 149/259 (57%), Gaps = 30/259 (11%)
Query: 68 GQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEV 127
GQ++ + K YM + A + G TSPNP VG +IV DG +VG G+H KAG PHAEV
Sbjct: 34 GQIELDQK----YMLLALAEARRGQGRTSPNPCVGAIIVGDGSVVGRGYHKKAGTPHAEV 89
Query: 128 FALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLE 187
ALRDAGE A GATAYV+LEPC+H GRTPPC AL KA V +VVVGM DPNP+VN +G++
Sbjct: 90 HALRDAGEKAAGATAYVTLEPCSHTGRTPPCCVALAKAGVLRVVVGMTDPNPLVNGRGVQ 149
Query: 188 RLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GV 243
LRD GI+V+ G+ + C+ +N FI +I TG P+ ++ +S++G + + GE
Sbjct: 150 YLRDHGIEVSTGICEADCREINRPFIKKITTGTPWMIMKAGISLDGRMNYKEGEPGWITG 209
Query: 244 AESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
ESG QL DAI++ + + + + N + R+PG
Sbjct: 210 PESGALVHQLRDSVDAIMVGSGT--------------------VMIDNPSLTTRLPGGG- 248
Query: 304 ESSSKVIVFTDGEITVEPD 322
V V D ++ +PD
Sbjct: 249 -GRDPVAVILDSQLKTDPD 266
>gi|26987252|ref|NP_742677.1| riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440]
gi|24981894|gb|AAN66141.1|AE016242_9 riboflavin biosynthesis protein RibD [Pseudomonas putida KT2440]
Length = 378
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 11 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 71 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 131 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 190
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 191 LRARSSVVLTSAAS 204
>gi|296133286|ref|YP_003640533.1| riboflavin biosynthesis protein RibD [Thermincola potens JR]
gi|296031864|gb|ADG82632.1| riboflavin biosynthesis protein RibD [Thermincola potens JR]
Length = 385
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 161/253 (63%), Gaps = 7/253 (2%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D YMR +ELA KA G+TSPNPMVG VIVKDG+++G+G+H KAG PHAEV ALR+AG
Sbjct: 3 KTDVKYMRMALELAAKARGNTSPNPMVGAVIVKDGRVIGKGYHMKAGTPHAEVHALREAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
EL+ GAT YV+LEPC+HYGRTPPC++A+I A V +VVV M DPNP+V+ +G++++R+AGI
Sbjct: 63 ELSRGATMYVTLEPCSHYGRTPPCSKAVIAAGVARVVVAMEDPNPLVSGQGIQQMREAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
V VG+ ++ + LNE FI I T +PF ++ ++++G + G +G +L+
Sbjct: 123 QVEVGLMEKEARELNEVFIKYIKTRRPFVVMKSAMTLDGKIATATGHSRWITGEEARRLV 182
Query: 255 Q----EYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
YDAI++ + + + ++ A P RII S P+ + L +
Sbjct: 183 HLWRSWYDAILVGIGTVLTDNPLLTCRLEDRQAQNPVRIILDSLGRLPVDVNVLKTIEQA 242
Query: 308 KVIVFTDGEITVE 320
VIV + +I E
Sbjct: 243 PVIVVSTEKIPRE 255
>gi|425063433|ref|ZP_18466558.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pasteurella
multocida subsp. gallicida X73]
gi|404382996|gb|EJZ79453.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pasteurella
multocida subsp. gallicida X73]
Length = 375
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 136/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 7 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + LI A V KVV M DPNP V +GL L DAGI+
Sbjct: 67 ARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLRMLSDAGIES 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 127 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 186
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 187 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 240
>gi|404400700|ref|ZP_10992284.1| riboflavin biosynthesis protein RibD [Pseudomonas fuscovaginae
UPB0736]
Length = 379
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K ST PNP VGCVIV+DG +VGEG+H +AG+PHAEV ALR+AGE
Sbjct: 11 DAHYMARALELARKGRYSTHPNPRVGCVIVRDGVVVGEGWHVRAGEPHAEVHALREAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL+RL DAGI V
Sbjct: 71 ARGATAYVTLEPCSHFGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGRGLKRLSDAGIAV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + +N F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 131 HSGVLEGEARAINRGFLKRMEHGLPFVRIKLAMSLDGRTAMASGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAESSVVLTGADT 204
>gi|386010175|ref|YP_005928452.1| protein RibD [Pseudomonas putida BIRD-1]
gi|313496881|gb|ADR58247.1| RibD [Pseudomonas putida BIRD-1]
Length = 376
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSAAS 202
>gi|429331890|ref|ZP_19212630.1| riboflavin biosynthesis protein RibD [Pseudomonas putida CSV86]
gi|428763401|gb|EKX85576.1| riboflavin biosynthesis protein RibD [Pseudomonas putida CSV86]
Length = 376
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR+AGEL
Sbjct: 9 DAHYMARALELARKGLYSTHPNPRVGCVIVRDGRIVGEGWHVRAGEPHAEVHALREAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+ A V +VV M DPNP V GL+RL DAGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVNAGVSRVVAAMQDPNPQVAGNGLKRLADAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ PF ++ +S++G GE +G Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHRLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSAAS 202
>gi|424074097|ref|ZP_17811508.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407995044|gb|EKG35592.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 378
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPDVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|417850670|ref|ZP_12496526.1| hypothetical protein GEW_04762 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338220474|gb|EGP05979.1| hypothetical protein GEW_04762 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 376
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 136/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 8 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + LI A V KVV M DPNP V +GL L DAGI+
Sbjct: 68 ARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLSMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 128 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 187
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 188 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 241
>gi|393200940|ref|YP_006462782.1| pyrimidine deaminase [Solibacillus silvestris StLB046]
gi|327440271|dbj|BAK16636.1| pyrimidine deaminase [Solibacillus silvestris StLB046]
Length = 371
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 170/300 (56%), Gaps = 15/300 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D YM+ +ELA A G+T+PNP+VG VIVKDG IVG G H KAG+PHAEV A+ AG
Sbjct: 2 KTDQDYMQLALELAASARGNTNPNPLVGAVIVKDGVIVGTGLHRKAGEPHAEVHAVNMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E + AT YV+LEPC+HYG+TPPC + L ++ K+VVV DPNP V +G+ LRDAGI
Sbjct: 62 EHTKDATIYVTLEPCSHYGKTPPCAKLLKESGFKRVVVATEDPNPEVAGRGIRLLRDAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V VGV E ++LNE FIH ++T +PF ++ ++++G + G E+
Sbjct: 122 EVEVGVLQEEAQKLNERFIHNMLTERPFVVAKFAMTLDGKIATYNGHSQWITGEEARADV 181
Query: 251 SQLLQEYDAIILSASST----KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+L E D I++ + K + + + P R++ S +P+ +++ +
Sbjct: 182 HELRHEVDGILVGVQTVLNDNPKLTTRLNDDRQGRNPIRVVLDSTLKTPVD-AHIADTTD 240
Query: 307 SKVIVFT--DGEITVEPDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGN 360
++ I+ T D + + G+E + + + L+++ +L Y G +LV+ GN
Sbjct: 241 ARTIIVTSLDSDEEKAQQLERNGVEIIRVDKEKTGLHIEDMLKALYKKGITHLLVEGGGN 300
>gi|422672002|ref|ZP_16731367.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aceris str. M302273]
gi|424069602|ref|ZP_17807048.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|330969741|gb|EGH69807.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aceris str. M302273]
gi|407994358|gb|EKG34940.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 378
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|15602614|ref|NP_245686.1| hypothetical protein PM0749 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721046|gb|AAK02833.1| RibD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 376
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 136/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 8 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + LI A V KVV M DPNP V +GL L DAGI+
Sbjct: 68 ARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLSMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 128 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 187
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 188 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 241
>gi|383310423|ref|YP_005363233.1| riboflavin biosynthesis protein RibD [Pasteurella multocida subsp.
multocida str. HN06]
gi|380871695|gb|AFF24062.1| riboflavin biosynthesis protein RibD [Pasteurella multocida subsp.
multocida str. HN06]
Length = 375
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 136/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 7 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + LI A V KVV M DPNP V +GL L DAGI+
Sbjct: 67 ARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLSMLSDAGIES 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 127 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 186
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 187 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 240
>gi|260767835|ref|ZP_05876770.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio furnissii CIP 102972]
gi|260617344|gb|EEX42528.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio furnissii CIP 102972]
Length = 369
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 173/336 (51%), Gaps = 34/336 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI + IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 8 DYQMMSRAIKLAQRGRFTTAPNPNVGCVITQGESIVGEGFHFRAGEPHAEVHALRMAGEQ 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+HYGRTPPC E LIKA V +V+ M DPNP V +G++ LR+AGI+V
Sbjct: 68 SVGATAYVTLEPCSHYGRTPPCAEGLIKAGVARVICAMQDPNPQVAGRGIDMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN AFI R+ TG P+ L+ S++G G + Q +Q
Sbjct: 128 QVGLLEADALALNPAFIKRMKTGMPWVQLKMAASLDGQTALANGRSQWITSPQARQDVQA 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
Y A +LS S T + +PA E QP R I H +
Sbjct: 188 YRAQAGAVLSTSQTVLADNASLTVRWQDLPAHVQATYAEQHLRQPVRAILDRQHQLHREL 247
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVL-DYCYSHGFCSVLVDL 357
+ +S+ + D ++ V D QLNL+ VL H + V+
Sbjct: 248 ALYATDSAVLRVANQDADVCVALD---------EHGQLNLREVLGALAKHHNINHIWVEA 298
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L K +EQ+L+ ++VV + P GSDG
Sbjct: 299 GAT------LAKSLLEQDLVDELVVYLAPKIMGSDG 328
>gi|397696264|ref|YP_006534147.1| riboflavin biosynthesis protein RibD [Pseudomonas putida DOT-T1E]
gi|397332994|gb|AFO49353.1| riboflavin biosynthesis protein RibD [Pseudomonas putida DOT-T1E]
Length = 376
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSAAS 202
>gi|417616802|ref|ZP_12267236.1| riboflavin biosynthesis protein RibD [Escherichia coli G58-1]
gi|345381174|gb|EGX13059.1| riboflavin biosynthesis protein RibD [Escherichia coli G58-1]
Length = 355
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 146/239 (61%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 241
>gi|295696432|ref|YP_003589670.1| riboflavin biosynthesis protein RibD [Kyrpidia tusciae DSM 2912]
gi|295412034|gb|ADG06526.1| riboflavin biosynthesis protein RibD [Kyrpidia tusciae DSM 2912]
Length = 371
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 162/300 (54%), Gaps = 15/300 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MR ++LA A G TSPNPMVG VIVKDG++VG+G H KAG PHAEV ALR AGE
Sbjct: 3 DEDWMRWALQLAASARGQTSPNPMVGAVIVKDGELVGQGAHLKAGGPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRTPPC+ ALI+ V +VVV M+DPNP+V G+ RLR AG+ V
Sbjct: 63 ARGATVYVTLEPCDHHGRTPPCSRALIEHGVARVVVAMVDPNPLVAGGGIRRLRQAGVKV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ ++ + LN FI R+ G+P+ + ++++ + + GE +G + + E
Sbjct: 123 EVGLLEKDARALNRGFIQRMTRGRPWVIAKIAMTLDAQIATRTGESRWITGEKAREKVHE 182
Query: 257 Y----DAIILSASSTKKYSIPASQEPDA----NQPFRIITVSNHASPIRIPGLSEESSSK 308
DA++ + + P QP R++ S P LS S+
Sbjct: 183 LRSRVDAVVTGVGTVIADDPRLTARPPGGGLPRQPLRVVLDSRLRIPADAQILSTVSAPT 242
Query: 309 VIVFTDGEITVE--PDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLVDLRGNY 361
V+ G E ++ +G++ + L+L+ V G + LV+ G
Sbjct: 243 VVCAGRGLAPAERVAELAARGVDVWLIDPDSQGGLDLRQVFGRLGEAGVNTALVEAGGRL 302
>gi|421524832|ref|ZP_15971453.1| riboflavin biosynthesis protein RibD [Pseudomonas putida LS46]
gi|402751295|gb|EJX11808.1| riboflavin biosynthesis protein RibD [Pseudomonas putida LS46]
Length = 376
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSAAS 202
>gi|339492799|ref|YP_004713092.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338800171|gb|AEJ04003.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 366
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC EAL+KA V +VV M DPNP V GLERLR AGI+V
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRSAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F R+ +G P+ + +S++G GE +G Q
Sbjct: 124 ASGVLEGEARELNAGFTKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 183
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 184 LRARSSVVLTGADT 197
>gi|148545799|ref|YP_001265901.1| riboflavin biosynthesis protein RibD [Pseudomonas putida F1]
gi|148509857|gb|ABQ76717.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas putida F1]
Length = 376
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSAAS 202
>gi|417855851|ref|ZP_12500912.1| hypothetical protein AAUPMG_04557 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338215281|gb|EGP01578.1| hypothetical protein AAUPMG_04557 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 375
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 136/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 7 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + LI A V KVV M DPNP V +GL L DAGI+
Sbjct: 67 ARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLSMLSDAGIES 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 127 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 186
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 187 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 240
>gi|196037929|ref|ZP_03105239.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
gi|196031199|gb|EDX69796.1| riboflavin biosynthesis protein RibD [Bacillus cereus NVH0597-99]
Length = 367
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 180/322 (55%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ ++
Sbjct: 126 GVCEEKSKKMNEVFNKYIMTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHKIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAEKRKVLESAGVKVFVTSGEKHINLYEMLDVLGRKGISSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ P
Sbjct: 299 ----ASFIENELMDKLILYFAP 316
>gi|395446901|ref|YP_006387154.1| riboflavin biosynthesis protein RibD [Pseudomonas putida ND6]
gi|388560898|gb|AFK70039.1| riboflavin biosynthesis protein RibD [Pseudomonas putida ND6]
Length = 378
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 11 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 71 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVTRVVAAMQDPNPQVAGQGLRRLAEAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 131 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 190
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 191 LRARSSVVLTSAAS 204
>gi|52425429|ref|YP_088566.1| RibD protein [Mannheimia succiniciproducens MBEL55E]
gi|52307481|gb|AAU37981.1| RibD protein [Mannheimia succiniciproducens MBEL55E]
Length = 373
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 131/196 (66%), Gaps = 3/196 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +M+ +ELA K +T+PNP VGCV+VK G+IVG+GFH KAG+PHAEV A+R+AG
Sbjct: 6 EQDRAFMQLAIELAEKGQFTTTPNPSVGCVLVKQGEIVGKGFHFKAGEPHAEVMAMREAG 65
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A+GATAYV+LEPC+H+GRTPPC + LI+A V KV+ M DPNP V +GL+ L+ AGI
Sbjct: 66 KNAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVVKVIAAMEDPNPSVAGQGLKMLQQAGI 125
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ VG+ E +RLN F+ R+ TG P+ L+ ++++G GE ES
Sbjct: 126 ETAVGLLQEQAERLNRGFLKRMRTGLPYVQLKMAMTIDGRTATSTGESQWITGESARIDV 185
Query: 252 QLLQEYDAIILSASST 267
Q + + ILSAS T
Sbjct: 186 QQERAKASAILSASGT 201
>gi|337754121|ref|YP_004646632.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Francisella sp. TX077308]
gi|336445726|gb|AEI35032.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Francisella sp. TX077308]
Length = 356
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 186/324 (57%), Gaps = 20/324 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
+ +YM++ + LA + S SPNPMVGC+IVK+G I+ EG+H G+ HAE+ AL+ AG+
Sbjct: 5 ENYYMQQSLTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAIGEAHAEIHALKKAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+G+TPPCT+ALIKA ++KVVV LDPNP+V KG+++L+DAGI+V
Sbjct: 65 AKGATAYVTLEPCCHHGKTPPCTDALIKAGIQKVVVATLDPNPLVAGKGIQKLKDAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQ 252
VGV ++ + N+ F H T +PF ++ +S++G + D E+ Q
Sbjct: 125 KVGVLEKQAQDQNKIFFHYQKTQRPFVYAKWAMSLDGKIAVNGNDSKKISSKEAFVDTHQ 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPI--RIPGLSEESSS 307
L DAI++ + + + N+ P R I +SN+ S I R L++ +
Sbjct: 185 LRNICDAILIGNQTLIEDNPSLDVRIQLNKKKHPTRFI-ISNNLSEIDKRWKVLNQNHAK 243
Query: 308 KVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
+ V + V ++ + GIE L +Q+ L ++L+ G S+LV+ G
Sbjct: 244 TIFVCSKISAQVASELDSLGIEYWLLPTFQNQVCLDSLLNKMGQTGITSLLVE--GGKKT 301
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPV 387
LE I Q L+ ++V + PV
Sbjct: 302 LENF----INQKLINELVTYLSPV 321
>gi|206969393|ref|ZP_03230348.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
gi|206736434|gb|EDZ53592.1| riboflavin biosynthesis protein RibD [Bacillus cereus AH1134]
Length = 367
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 180/322 (55%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC A+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAGAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAEEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ KI++ P
Sbjct: 299 ----ASFIENKLMDKIILYFAP 316
>gi|218232159|ref|YP_002368101.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
gi|218160116|gb|ACK60108.1| riboflavin biosynthesis protein RibD [Bacillus cereus B4264]
Length = 367
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 180/322 (55%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+ HAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGESHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAEEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ KI++ P
Sbjct: 299 ----ASFIENKLMDKIILYFAP 316
>gi|386834105|ref|YP_006239420.1| riboflavin biosynthesis protein RibD [Pasteurella multocida subsp.
multocida str. 3480]
gi|385200806|gb|AFI45661.1| riboflavin biosynthesis protein RibD [Pasteurella multocida subsp.
multocida str. 3480]
Length = 375
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 136/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 7 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + LI A V KVV M DPNP V +GL L DAGI+
Sbjct: 67 ARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLRMLSDAGIES 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 127 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 186
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 187 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 240
>gi|422873144|ref|ZP_16919629.1| riboflavin biosynthesis protein RibD [Clostridium perfringens F262]
gi|380306022|gb|EIA18298.1| riboflavin biosynthesis protein RibD [Clostridium perfringens F262]
Length = 365
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 175/299 (58%), Gaps = 15/299 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVKDG+I+G+G+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGNHAEINAINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K K+VVVG LDPNP+V+ K ++ LR++GI+V
Sbjct: 62 TEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKSIKILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL--DQLGEGVA--ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + D + + +S +
Sbjct: 122 KVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKDFKSKWITNKKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L ++ S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQNES 241
Query: 308 KVIVFTDG--EITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
+ ++FT + + KGIE + ++ ++N+ VL+ SVL++ GN
Sbjct: 242 RTLIFTTNKKDKIKNEKLKDKGIEVIEVNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|269798015|ref|YP_003311915.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008]
gi|269094644|gb|ACZ24635.1| riboflavin biosynthesis protein RibD [Veillonella parvula DSM 2008]
Length = 404
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 118/166 (71%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM+R +ELA A G TSPNP+VG V+VKD I+GEG+H KAG HAEV AL AG+
Sbjct: 3 DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAGD 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYG+TPPC +I+A + KV+VG DPNP+V+ KG+E LR+AGI+
Sbjct: 63 NAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGMELLREAGIE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V V + C LNE F I TGKPF T++ +S++G + G+
Sbjct: 123 VVCPVCSDECAELNEHFFTYIQTGKPFVTIKSAMSLDGKIATSTGQ 168
>gi|89093485|ref|ZP_01166433.1| riboflavin biosynthesis protein RibD [Neptuniibacter caesariensis]
gi|89082175|gb|EAR61399.1| riboflavin biosynthesis protein RibD [Oceanospirillum sp. MED92]
Length = 379
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 166/298 (55%), Gaps = 20/298 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R + LA + + +T+PNP VGCV+VKD IVGEGFH +AG+ HAEV A+ AG+L
Sbjct: 9 DHRYMARAIVLAKQGLYTTNPNPRVGCVLVKDEVIVGEGFHFRAGEGHAEVNAMAQAGDL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA V +VV M+DPNP V +G++ L AGI
Sbjct: 69 AKGATAYVTLEPCSHYGRTPPCAEGLIKAGVNRVVCAMVDPNPQVAGRGIQMLESAGISA 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY------ 250
G+ + + LN FI R+ TG PF +L+ S++G GE +G
Sbjct: 129 ESGLLEAEARALNPGFIKRMETGLPFVSLKIATSLDGRTAMASGESKWITGAAARSDVQK 188
Query: 251 -----SQLLQEYDAIILSASS----TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGL 301
S +L ++I+ S+ ++ + ++E QP R++ SN +PI L
Sbjct: 189 LRARSSAILTGVESILTDNSALTVRAEQLGLAQAEEIVKQQPLRVVLDSNLRTPIDASIL 248
Query: 302 SEESSSKVIVFTDGEITVEPDMGTKGIETV----NLHQLNLKAVLDYCYSHGFCSVLV 355
S+ + + + + +E + G E + N +++L A+L + C+ L+
Sbjct: 249 SQPGRTLIATISKDAVVIE-KLQAAGAEVIQMPANQGRVDLVALLKHLAGEEQCNELL 305
>gi|146281221|ref|YP_001171374.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501]
gi|145569426|gb|ABP78532.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri A1501]
Length = 359
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA K + ST PNP VGCVIV DG++VGEG+H +AG+PHAEV ALR AGE A GA
Sbjct: 1 MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGERARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC EAL+KA V +VV M DPNP V GLERLR AGI+V GV
Sbjct: 61 TAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLERLRSAGIEVASGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QLLQEY 257
+ + LN FI R+ +G P+ + +S++G GE +G Q L+
Sbjct: 121 LEGEARELNAGFIKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQRLRAR 180
Query: 258 DAIILSASST 267
+++L+ + T
Sbjct: 181 SSVVLTGADT 190
>gi|229080603|ref|ZP_04213123.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2]
gi|228702704|gb|EEL55170.1| Riboflavin biosynthesis protein [Bacillus cereus Rock4-2]
Length = 360
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 180/320 (56%), Gaps = 25/320 (7%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G
Sbjct: 1 MKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQARGG 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV
Sbjct: 61 TIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQE 256
+E K++NE F I+T +PF T++ ++++G + L + E+ Q+ E
Sbjct: 121 CEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIV 311
AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + + +
Sbjct: 181 NAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPTWI 235
Query: 312 FTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
FT E + G K T +NL +LD G S+L++ G
Sbjct: 236 FTTSNHAEEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN---- 291
Query: 367 LLKEGIEQNLLQKIVVEVLP 386
IE L+ KI++ P
Sbjct: 292 --ASFIENKLMDKIILYFAP 309
>gi|449143621|ref|ZP_21774444.1| riboflavin biosynthesis protein RibD [Vibrio mimicus CAIM 602]
gi|449080619|gb|EMB51530.1| riboflavin biosynthesis protein RibD [Vibrio mimicus CAIM 602]
Length = 367
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 138/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +TSPNP VGCVI + +IVGEGFH +AG+PHAEV A+R AGEL
Sbjct: 8 DHQMMSRAIKLAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 TRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGRGVQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ R+ TG P+ L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPAARKDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
+ A ILS S T + + +P S E D QP R+I H
Sbjct: 188 FRAQASAILSTSQTVLADNASLAVRWHDLPQSVQAQYAETDLRQPLRVILDRQH 241
>gi|406939501|gb|EKD72510.1| hypothetical protein ACD_45C00658G0009 [uncultured bacterium]
Length = 360
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 181/342 (52%), Gaps = 22/342 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM + LA + + SPNPMVGC+IVK+ IVG+GFH +AG+PHAE+FALR+A E A+G
Sbjct: 8 YMSLALRLAEQGRLTVSPNPMVGCIIVKNNHIVGQGFHQRAGEPHAEIFALREAREQAKG 67
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A+AY++LEPC H G+TPPCT ALI A +K V V +DPNP+V+ KG+ LR AGI V VG
Sbjct: 68 ASAYITLEPCCHQGKTPPCTSALIAAGIKNVYVSCMDPNPLVSGKGITLLRSAGIAVEVG 127
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG----HVLDQLGEGVAESGGYYSQLLQ 255
+LNE F H I +PF ++ +S++G + D ES + Q+ Q
Sbjct: 128 FMSAEATQLNEIFFHYIKNKRPFVIAKWAMSLDGKKKVNPHDDKQISCRESQYHTHQVRQ 187
Query: 256 EYDAIILSASSTKK------YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK- 308
+ DAI++ A++ + +S + + QP RII P+ + ++++ +
Sbjct: 188 QVDAILVGANTIHQDNPQLTVRFASSDKAHSKQPIRIILSGQKKLPLNLNIFNDKTPGRT 247
Query: 309 VIVFTDGEITVEPDMGTKGIETVNL-----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
+IV T I + + + +E L ++ L +LD S+LV+ G
Sbjct: 248 IIVATKKTIDLVKHIKSNHVELCILPENKEKKICLPTLLDKLGQKEITSLLVE--GGATV 305
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGK 405
E KE NL+ K+ + + GS H + K
Sbjct: 306 HESFFKE----NLVNKVHIYLSSTIIGSLDKKKHLSIKDFSK 343
>gi|443642093|ref|ZP_21125943.1| Riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
syringae B64]
gi|443282110|gb|ELS41115.1| Riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
syringae B64]
Length = 378
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL++A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALVEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|422666281|ref|ZP_16726150.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330976721|gb|EGH76762.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 378
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +E+A K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALEMARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|392308003|ref|ZP_10270537.1| riboflavin biosynthesis protein [Pseudoalteromonas citrea NCIMB
1889]
Length = 370
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 176/343 (51%), Gaps = 43/343 (12%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA + +T+PNP VGCV+VKDG +VGEGFH +AG+PHAEV AL+ AG
Sbjct: 7 DKHFMARAIELARQGRYTTTPNPNVGCVVVKDGYVVGEGFHQRAGEPHAEVHALKAAGSR 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC E LIKA V +VV M+DPNP V +GL L++AGI+
Sbjct: 67 ASGATAYVTLEPCSHYGRTPPCAEGLIKAGVARVVAAMVDPNPQVAGRGLAMLKEAGIET 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + + LN+ F+ R+ TG PF T + SV+G GE + Q +Q
Sbjct: 127 ASGLLEAQARALNDGFLKRMETGLPFVTCKLAASVDGKTALNNGESKWITSSQARQDVQG 186
Query: 257 YDA---IILSASST------------KKYSIPASQEPDANQPFRIITVSNH--------- 292
+ A IL+ + T + I + QP R+I S +
Sbjct: 187 FRAQSCAILTGADTVLADDAKLNVRETECDITLPEGTSLRQPIRVIFDSQNRLTPALALF 246
Query: 293 --ASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGF 350
+SPI I S +++ + F E V P G K ++ ++VL G
Sbjct: 247 QFSSPIIILRTSLDNTQQWPHFV--EQVVVPKQGEK---------IDCQSVLALLAKRGV 295
Query: 351 CSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
V ++ + +QNL+ + VV + P G DG
Sbjct: 296 NRVWLEAGATLAGVFH------QQNLIDEFVVYLAPKIIGHDG 332
>gi|399047207|ref|ZP_10739303.1| riboflavin biosynthesis protein RibD [Brevibacillus sp. CF112]
gi|433543583|ref|ZP_20499987.1| riboflavin biosynthesis protein RibD [Brevibacillus agri BAB-2500]
gi|398054814|gb|EJL46920.1| riboflavin biosynthesis protein RibD [Brevibacillus sp. CF112]
gi|432185140|gb|ELK42637.1| riboflavin biosynthesis protein RibD [Brevibacillus agri BAB-2500]
Length = 366
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 168/293 (57%), Gaps = 12/293 (4%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +M +ELA A G TSPNP+VG V+V +G + G G H +AG+PHAEV ALR AG
Sbjct: 2 EQDKRFMALALELARSAHGQTSPNPLVGAVLVSNGAVAGMGAHLRAGEPHAEVHALRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A GAT YV+LEPC+H+G+TPPC +A++ A +++ V+ LDPNP+V KG+E+LR AG+
Sbjct: 62 EKAAGATLYVTLEPCSHFGKTPPCADAVVAAGIRRAVIATLDPNPLVAGKGVEKLRAAGV 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYY 250
+V VGV + KRLNE F H I T +PF T++ +++G + G +G
Sbjct: 122 EVLVGVGEAEAKRLNEVFFHYITTKRPFVTVKTASTLDGKIASVTGHSRWITGERARAEV 181
Query: 251 SQLLQEYDAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+L +++DAI++ + + ++ QP RI+ S +P+ + E +
Sbjct: 182 HELRRQHDAILVGVGTVLADDPLLTARQGEQLYGRQPVRIVLDSELRTPL-AARVIENAD 240
Query: 307 SKVIVFTDGEITVE--PDMGTKGIET-VNLHQLNLKAVLDYCYSHGFCSVLVD 356
+ +FT E + KG+ V Q++++ VLD G S+LV+
Sbjct: 241 APTWIFTTEAAPPEKRAALAAKGVRLFVASGQISVENVLDTLGECGITSLLVE 293
>gi|421456670|ref|ZP_15906008.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-123]
gi|400210374|gb|EJO41343.1| riboflavin biosynthesis protein RibD [Acinetobacter baumannii
IS-123]
Length = 359
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M++ +ELA + + ST PNP VGCVIVKD +++GEGFHPKAGQPHAEVFALR+AG
Sbjct: 5 KQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQLIGEGFHPKAGQPHAEVFALREAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP KG++ L++AGI
Sbjct: 65 EHAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNP--AGKGVQILKNAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V +G+ ++L +LN+ F+ + TG P+ L+ S++G GE +G Q +
Sbjct: 123 EVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDV 182
Query: 255 QEYDAI 260
Q + AI
Sbjct: 183 QHWRAI 188
>gi|170021214|ref|YP_001726168.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli ATCC 8739]
gi|188492525|ref|ZP_02999795.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638]
gi|194438906|ref|ZP_03070991.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1]
gi|251783919|ref|YP_002998223.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Escherichia coli BL21(DE3)]
gi|253774601|ref|YP_003037432.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254160480|ref|YP_003043588.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli B str. REL606]
gi|254287284|ref|YP_003053032.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Escherichia coli BL21(DE3)]
gi|300930291|ref|ZP_07145704.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1]
gi|312970509|ref|ZP_07784690.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70]
gi|422785020|ref|ZP_16837759.1| riboflavin biosynthesis protein RibD [Escherichia coli H489]
gi|422791218|ref|ZP_16843921.1| riboflavin biosynthesis protein RibD [Escherichia coli TA007]
gi|432879906|ref|ZP_20096726.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE154]
gi|442596474|ref|ZP_21014285.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|169756142|gb|ACA78841.1| riboflavin biosynthesis protein RibD [Escherichia coli ATCC 8739]
gi|188487724|gb|EDU62827.1| riboflavin biosynthesis protein RibD [Escherichia coli 53638]
gi|194422200|gb|EDX38202.1| riboflavin biosynthesis protein RibD [Escherichia coli 101-1]
gi|242376192|emb|CAQ30883.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Escherichia coli BL21(DE3)]
gi|253325645|gb|ACT30247.1| riboflavin biosynthesis protein RibD [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972381|gb|ACT38052.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli B str. REL606]
gi|253976591|gb|ACT42261.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli BL21(DE3)]
gi|300461863|gb|EFK25356.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 187-1]
gi|310337158|gb|EFQ02296.1| riboflavin biosynthesis protein RibD [Escherichia coli 1827-70]
gi|323963400|gb|EGB58962.1| riboflavin biosynthesis protein RibD [Escherichia coli H489]
gi|323972264|gb|EGB67474.1| riboflavin biosynthesis protein RibD [Escherichia coli TA007]
gi|431413530|gb|ELG96295.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE154]
gi|441655135|emb|CCQ00198.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
Length = 367
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 146/239 (61%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 241
>gi|228940450|ref|ZP_04103019.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228979928|ref|ZP_04140248.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407]
gi|228779807|gb|EEM28054.1| Riboflavin biosynthesis protein [Bacillus thuringiensis Bt407]
gi|228819215|gb|EEM65271.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 348
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 176/308 (57%), Gaps = 25/308 (8%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A GAT YV+LEPC+HY
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQARGATIYVTLEPCSHY 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + D E+ Q+ E AI++ A++ +
Sbjct: 123 NKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIVFTDGEITVEP-- 321
K + P+ ++ P+ P RII S +RIP + + + +FT +
Sbjct: 183 KDN-PSLTTRIPNGRNPIRIIL----DSTLRIPMEANVVTDGEAPTWIFTTSNHAAKKKK 237
Query: 322 ---DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQ 378
+ G K T +NL +LD G S+L++ G IE L+
Sbjct: 238 ALENAGVKVFVTSGEKHINLHEILDVLGQKGVSSLLIEGGGEVN------ASFIENKLMN 291
Query: 379 KIVVEVLP 386
K+++ V P
Sbjct: 292 KLILYVAP 299
>gi|415777166|ref|ZP_11488418.1| riboflavin biosynthesis protein RibD [Escherichia coli 3431]
gi|315616646|gb|EFU97263.1| riboflavin biosynthesis protein RibD [Escherichia coli 3431]
Length = 367
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 146/239 (61%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIDAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 241
>gi|289675578|ref|ZP_06496468.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. syringae FF5]
Length = 194
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 119/165 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGISV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
GV + + LN+ F+ R+ TG P+ ++ +S++G GE
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGE 173
>gi|187932958|ref|YP_001885493.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str.
Eklund 17B]
gi|187721111|gb|ACD22332.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B str.
Eklund 17B]
Length = 378
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 203/373 (54%), Gaps = 43/373 (11%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM +ELA K +G +PNP+VG VIVKD +I+G G+H G HAEV A+ + + EG
Sbjct: 20 YMDLALELAKKGIGKVNPNPLVGAVIVKDNEIIGTGYHEYYGGAHAEVDAINNTTKSLEG 79
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+T Y++LEPC HYG+TPPC +I+ K+KKVV+GMLDPNP+V+ K +++L++ I+V VG
Sbjct: 80 STIYITLEPCAHYGKTPPCVNLIIEKKIKKVVIGMLDPNPMVSGKSVKKLKENDIEVIVG 139
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
VE+E CK+LNE+FI I + PF L+ +S++G + +GE ++ LL+
Sbjct: 140 VEEEKCKKLNESFIKYITSNLPFVILKSAISLDGKIATSIGESKWITSKEARIDGHLLRN 199
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
+ I+ +T P + + P RI+ S +RIP SSKVI D
Sbjct: 200 KLSAIMVGVNTIIKDNPELTCRIENGRNPIRIVV----DSTLRIP-----LSSKVIKNYD 250
Query: 315 G-----------EITVEPDMG--TKGIETVNLH-QLNLKAVLDYCYSHGFCSVLVDLRGN 360
G ++ E +G IE ++ + +++LK ++ Y + S+L++ G
Sbjct: 251 GLTIIATTKYADKLKKEKLVGRNVNVIEIIDKNKKVDLKELMRYLGTLKIDSILIEGGGT 310
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLPVWNG------SDGGNPHTLLNSLGKRLILKNLQP 414
L +E+N++ K+ + P G S GG + L+ K LK+L
Sbjct: 311 ------LNFSALEENIVDKVRFYIAPKILGGETSKSSIGGQGFSKLSDAVK---LKDLTY 361
Query: 415 KMSSQSIVLEGYL 427
+ S+ IV+EGY+
Sbjct: 362 EKLSEEIVIEGYI 374
>gi|16128399|ref|NP_414948.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. MG1655]
gi|170080000|ref|YP_001729320.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli str. K-12 substr. DH10B]
gi|238899702|ref|YP_002925498.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli BW2952]
gi|300947935|ref|ZP_07162083.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1]
gi|300957979|ref|ZP_07170144.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1]
gi|301025699|ref|ZP_07189215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1]
gi|301647336|ref|ZP_07247148.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1]
gi|331640931|ref|ZP_08342066.1| riboflavin biosynthesis protein RibD [Escherichia coli H736]
gi|386279440|ref|ZP_10057121.1| riboflavin biosynthesis protein RibD [Escherichia sp. 4_1_40B]
gi|386596710|ref|YP_006093110.1| riboflavin biosynthesis protein RibD [Escherichia coli DH1]
gi|387610940|ref|YP_006114056.1| riboflavin biosynthesis protein [Escherichia coli ETEC H10407]
gi|387620173|ref|YP_006127800.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
/ 5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli DH1]
gi|388476520|ref|YP_488706.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. W3110]
gi|404373736|ref|ZP_10978971.1| riboflavin biosynthesis protein RibD [Escherichia sp. 1_1_43]
gi|417260818|ref|ZP_12048316.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.3916]
gi|417270506|ref|ZP_12057859.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.4168]
gi|417275300|ref|ZP_12062637.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.2303]
gi|417292923|ref|ZP_12080203.1| riboflavin biosynthesis protein RibD [Escherichia coli B41]
gi|417632898|ref|ZP_12283119.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_S1191]
gi|417945768|ref|ZP_12588997.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH140A]
gi|417976614|ref|ZP_12617406.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH001]
gi|418301264|ref|ZP_12913058.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNF18]
gi|418959293|ref|ZP_13511192.1| riboflavin biosynthesis protein RibD [Escherichia coli J53]
gi|419140944|ref|ZP_13685701.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6A]
gi|419146592|ref|ZP_13691288.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6B]
gi|419152245|ref|ZP_13696833.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6C]
gi|419173843|ref|ZP_13717699.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7B]
gi|419811843|ref|ZP_14336715.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O32:H37 str. P4]
gi|421776019|ref|ZP_16212625.1| riboflavin biosynthesis protein RibD [Escherichia coli AD30]
gi|422764944|ref|ZP_16818671.1| riboflavin biosynthesis protein RibD [Escherichia coli E1520]
gi|422769642|ref|ZP_16823333.1| riboflavin biosynthesis protein RibD [Escherichia coli E482]
gi|422816428|ref|ZP_16864643.1| riboflavin biosynthesis protein RibD [Escherichia coli M919]
gi|423701195|ref|ZP_17675654.1| riboflavin biosynthesis protein RibD [Escherichia coli H730]
gi|425118507|ref|ZP_18520242.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0569]
gi|425271109|ref|ZP_18662623.1| riboflavin biosynthesis protein RibD [Escherichia coli TW15901]
gi|425281781|ref|ZP_18672902.1| riboflavin biosynthesis protein RibD [Escherichia coli TW00353]
gi|432415366|ref|ZP_19657997.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE44]
gi|432562324|ref|ZP_19798951.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE51]
gi|432579091|ref|ZP_19815525.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE56]
gi|432625998|ref|ZP_19861983.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE77]
gi|432635728|ref|ZP_19871614.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE81]
gi|432659656|ref|ZP_19895317.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE111]
gi|432684247|ref|ZP_19919566.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE156]
gi|432690304|ref|ZP_19925550.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE161]
gi|432702986|ref|ZP_19938112.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE171]
gi|432735940|ref|ZP_19970716.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE42]
gi|432953547|ref|ZP_20145846.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE197]
gi|433046485|ref|ZP_20233917.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE120]
gi|442590092|ref|ZP_21008876.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|450239517|ref|ZP_21899055.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli S17]
gi|140252|sp|P25539.1|RIBD_ECOLI RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
gi|581147|emb|CAA45735.1| unnamed protein product [Escherichia coli K-12]
gi|1773098|gb|AAB40170.1| riboflavin biosynthesis protein RibG [Escherichia coli]
gi|1786616|gb|AAC73517.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. MG1655]
gi|73853031|emb|CAJ28593.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Escherichia coli]
gi|85674554|dbj|BAE76194.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K12 substr. W3110]
gi|169887835|gb|ACB01542.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. DH10B]
gi|238861183|gb|ACR63181.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli BW2952]
gi|260450399|gb|ACX40821.1| riboflavin biosynthesis protein RibD [Escherichia coli DH1]
gi|299880011|gb|EFI88222.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 196-1]
gi|300315315|gb|EFJ65099.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 175-1]
gi|300452535|gb|EFK16155.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 116-1]
gi|301074481|gb|EFK89287.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 146-1]
gi|309700676|emb|CBI99972.1| riboflavin biosynthesis protein [Escherichia coli ETEC H10407]
gi|315135096|dbj|BAJ42255.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
/ 5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli DH1]
gi|323938599|gb|EGB34848.1| riboflavin biosynthesis protein RibD [Escherichia coli E1520]
gi|323943220|gb|EGB39376.1| riboflavin biosynthesis protein RibD [Escherichia coli E482]
gi|331037729|gb|EGI09949.1| riboflavin biosynthesis protein RibD [Escherichia coli H736]
gi|339413362|gb|AEJ55034.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNF18]
gi|342362500|gb|EGU26618.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH140A]
gi|344193781|gb|EGV47859.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli XH001]
gi|345391208|gb|EGX21002.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_S1191]
gi|359331174|dbj|BAL37621.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli str. K-12 substr. MDS42]
gi|378000277|gb|EHV63351.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6A]
gi|378001520|gb|EHV64579.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6B]
gi|378003829|gb|EHV66869.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6C]
gi|378037796|gb|EHW00319.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7B]
gi|384377995|gb|EIE35887.1| riboflavin biosynthesis protein RibD [Escherichia coli J53]
gi|385155326|gb|EIF17330.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O32:H37 str. P4]
gi|385539901|gb|EIF86728.1| riboflavin biosynthesis protein RibD [Escherichia coli M919]
gi|385712885|gb|EIG49824.1| riboflavin biosynthesis protein RibD [Escherichia coli H730]
gi|386123439|gb|EIG72035.1| riboflavin biosynthesis protein RibD [Escherichia sp. 4_1_40B]
gi|386225976|gb|EII48301.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.3916]
gi|386236849|gb|EII68821.1| riboflavin biosynthesis protein RibD [Escherichia coli 2.4168]
gi|386241953|gb|EII78866.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.2303]
gi|386252495|gb|EIJ02186.1| riboflavin biosynthesis protein RibD [Escherichia coli B41]
gi|404292775|gb|EJZ49566.1| riboflavin biosynthesis protein RibD [Escherichia sp. 1_1_43]
gi|408198885|gb|EKI24096.1| riboflavin biosynthesis protein RibD [Escherichia coli TW15901]
gi|408206201|gb|EKI31013.1| riboflavin biosynthesis protein RibD [Escherichia coli TW00353]
gi|408458758|gb|EKJ82543.1| riboflavin biosynthesis protein RibD [Escherichia coli AD30]
gi|408573645|gb|EKK49475.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0569]
gi|430943742|gb|ELC63848.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE44]
gi|431099557|gb|ELE04577.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE51]
gi|431108793|gb|ELE12764.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE56]
gi|431165133|gb|ELE65491.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE77]
gi|431174010|gb|ELE74071.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE81]
gi|431203773|gb|ELF02363.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE111]
gi|431225218|gb|ELF22423.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE156]
gi|431230792|gb|ELF26562.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE161]
gi|431247117|gb|ELF41359.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE171]
gi|431286828|gb|ELF77648.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE42]
gi|431470677|gb|ELH50574.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE197]
gi|431572874|gb|ELI45698.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE120]
gi|441609750|emb|CCP94789.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|449325079|gb|EMD14996.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli S17]
Length = 367
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 146/239 (61%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 241
>gi|392422575|ref|YP_006459179.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri CCUG
29243]
gi|390984763|gb|AFM34756.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri CCUG
29243]
Length = 366
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA + + ST PNP VGCVIV DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DHAWMARALQLACRGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC EAL+KA V +VV M DPNP V GLE LR AGI+V
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLELLRSAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G PF + +S++G GE +G Q
Sbjct: 124 ASGVLEGEARELNAGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 183
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 184 LRARSSVVLTGADT 197
>gi|376261623|ref|YP_005148343.1| riboflavin biosynthesis protein RibD [Clostridium sp. BNL1100]
gi|373945617|gb|AEY66538.1| riboflavin biosynthesis protein RibD [Clostridium sp. BNL1100]
Length = 367
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 201/367 (54%), Gaps = 26/367 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
FYM+R +E+A G T+PNP+VG VIVKDG+I+ EGFH G HAEV A ++A
Sbjct: 6 FYMKRALEIAKGGWGRTNPNPLVGAVIVKDGEIISEGFHEALGCAHAEVCAFQNATTDIS 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+HYGRTPPC +A++++ +K+VVV M+DPNP V KG++ L+DA I+V V
Sbjct: 66 GATIYVNLEPCSHYGRTPPCAKAIVESGIKEVVVAMVDPNPKVAGKGIQILKDANINVIV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLL 254
GV +E KRLNE FIH I PF ++ ++++G + G+ SG Y ++
Sbjct: 126 GVLEEEAKRLNEIFIHYITKRLPFVIMKTAMTLDGKIASVTGDSKWISGEPSREYVHKIR 185
Query: 255 QEYDAIILSASSTKKYSIPASQEP---DANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
+I++ ++ + + P D P RI+ S P+ + +S + +I+
Sbjct: 186 NRVSSIMVGVNTIINDNPSLTARPSSGDGIDPVRIVVDSCGRIPMDSKVIYCDSKAGLIL 245
Query: 312 FTDGEIT--VEPDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRG--NYGD 363
T +I E + ++G+ + + +NL+ ++ Y SVL++ G N+
Sbjct: 246 ATTDKINKDKETQLLSRGVRIIKTAEKNGKVNLRELMKELYKLEIDSVLLEGGGTLNFSA 305
Query: 364 LEMLLKEGIEQNLLQKIV---VEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQS 420
LE + + + KI+ V PV GGN ++ + + L +++ + +
Sbjct: 306 LEAGIVNKVMSFISPKIIGGSSAVTPV-----GGNG---IDKMKDAIALSDIRVEKFDRD 357
Query: 421 IVLEGYL 427
+++EGY+
Sbjct: 358 VLIEGYI 364
>gi|297567806|ref|YP_003686777.1| hypothetical protein Mesil_3462 [Meiothermus silvanus DSM 9946]
gi|296852255|gb|ADH65269.1| hypothetical protein Mesil_3462 [Meiothermus silvanus DSM 9946]
Length = 383
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 160/280 (57%), Gaps = 19/280 (6%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
D D +MR+ +ELA + +G TSPNP VGCV+V+ ++VG GFHP+AG+PHAEV ALR
Sbjct: 2 RDGPDVAFMRQALELAAQGIGRTSPNPPVGCVLVRGAEVVGRGFHPRAGEPHAEVLALRQ 61
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AGE A+GATAY++LEPC HYGRTPPC +ALI+A V +VVV DPNP V+ +GLE+L A
Sbjct: 62 AGERAQGATAYITLEPCAHYGRTPPCAQALIEAGVARVVVATTDPNPQVSGRGLEQLARA 121
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ 252
G+ VT G+ + +R E F H I +PF + LS++G G+ SG +
Sbjct: 122 GVAVTTGLLRDEAERQQEVFRHWIAHREPFVVFKTALSLDGKTATVAGDARWVSGEAARE 181
Query: 253 LLQ----EYDAIILSASS--------TKKYSIPASQEPDANQPFRIITVSNHASPIR--- 297
+Q E DA+++ + T + PA P +++ ++ +P R
Sbjct: 182 RVQLLRDELDAVVVGVGTVLTDDPWLTCRLREPAVPHRVPRDPVKVVFDTHARTPPRARL 241
Query: 298 -IPGLSEESSSKVIVFTDGE--ITVEPDMGTKGIETVNLH 334
PG E++ +++ +G VE ++ G E V L
Sbjct: 242 FAPGPRGEAARVLLLIAEGADPARVE-ELRQAGAEVVRLE 280
>gi|357058875|ref|ZP_09119721.1| riboflavin biosynthesis protein RibD [Selenomonas infelix ATCC
43532]
gi|355373221|gb|EHG20542.1| riboflavin biosynthesis protein RibD [Selenomonas infelix ATCC
43532]
Length = 367
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 179/311 (57%), Gaps = 22/311 (7%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
ND D+ YMR + +A A G T+PNP+VG VIV+DG I+ G+H AG+PHAE+ ALR
Sbjct: 2 NDIDES-YMREALRIAEHARGRTAPNPLVGAVIVRDGTIIASGWHRAAGEPHAEIHALRM 60
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AGELA GAT YV+LEPC H+GRT PC EA+I A + +VV+ + DPNP+V +GL L++A
Sbjct: 61 AGELARGATLYVTLEPCAHHGRTGPCAEAVIAAGIARVVIALCDPNPLVAGRGLALLKEA 120
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ 252
GI+V GV + +R NE F+ + +PF TL+ ++++G + G +G +
Sbjct: 121 GIEVVTGVCEAEARRQNEVFLKWVTQKRPFVTLKTAMTIDGKIASHTGASQWITGEAARR 180
Query: 253 LLQE----YDAIILSASSTKKYSIPA--SQEPD--ANQPFRIITVSNHASPIRIPGLSEE 304
+ E YDAI++ + P+ ++ PD + P RI+ S +P+ +++
Sbjct: 181 RVHEYRNAYDAILVGIGTVLADD-PSLTTRLPDRTGHNPLRIVLDSEARTPLDAKLVTDC 239
Query: 305 SSSKVIVFTD-GEITVEPDMGTKGIETVNL--HQLNLKAVLDYCYSHGFCSVLVD----- 356
++ +IV ++ + + G+ET+ L ++++ A+LDY + S+ V+
Sbjct: 240 AAPTLIVVSERADQRRVRLLHACGVETLTLGAERVDIAALLDYLGAREITSLFVEGGGTV 299
Query: 357 ----LRGNYGD 363
L G+Y D
Sbjct: 300 NWSFLAGDYVD 310
>gi|50120065|ref|YP_049232.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium atrosepticum SCRI1043]
gi|49610591|emb|CAG74036.1| riboflavin biosynthesis protein [Pectobacterium atrosepticum
SCRI1043]
Length = 369
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 139/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DELYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGITV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 SHGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 Y---DAIILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
+ A ILS+S+T P+ E D QP R+I S
Sbjct: 184 FRAESAAILSSSTTVLADDPSLTVRWSELDADVQKHYSEADLRQPVRVIVDSQQ 237
>gi|422619295|ref|ZP_16687986.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
japonica str. M301072]
gi|330899666|gb|EGH31085.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
japonica str. M301072]
Length = 301
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI+A + VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALIEAGLTGVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 189 LRAQSSVVLSGADT 202
>gi|419802262|ref|ZP_14327458.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
HK262]
gi|419845044|ref|ZP_14368331.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
HK2019]
gi|385191024|gb|EIF38451.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
HK262]
gi|386416970|gb|EIJ31462.1| riboflavin biosynthesis protein RibD [Haemophilus parainfluenzae
HK2019]
Length = 376
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 143/235 (60%), Gaps = 18/235 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M+ +ELA K +T+PNP VGCV+VK+G+IVG+GFH KAGQPHAE AL DAGE
Sbjct: 8 DDVKFMQLALELAAKGQYTTTPNPSVGCVLVKNGEIVGKGFHLKAGQPHAERMALADAGE 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GATAYV+LEPC+HYGRTPPC LI+A V +V+ M DPNP V KGL+ L DAGI
Sbjct: 68 KAKGATAYVTLEPCSHYGRTPPCALGLIEAGVSRVIAAMADPNPQVAGKGLKMLADAGIP 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V + +E + LN+ F+ R+ TGKP+ L+ +S++G GE +G +Q
Sbjct: 128 SAVNLLNEQAEALNKGFLKRMRTGKPYVQLKLAMSLDGRTAMASGESKWITGDAARADVQ 187
Query: 256 EYDA---IILSASSTKKYSIPA-----SQEPD----------ANQPFRIITVSNH 292
+ A +LS S+T P+ +Q PD QP R+I S +
Sbjct: 188 KMRAKASALLSTSATVLADDPSLNVRWNQFPDDLKAEYAEETVRQPIRVILDSKN 242
>gi|441504652|ref|ZP_20986645.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Photobacterium sp. AK15]
gi|441427751|gb|ELR65220.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Photobacterium sp. AK15]
Length = 375
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 141/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI IVGEG+H +AGQPHAEVFALR AGE
Sbjct: 6 DHAMMLRAIKLAKRGRFTTAPNPNVGCVIAHGEDIVGEGYHYQAGQPHAEVFALRAAGEK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC EAL+KA+V +VV M+DPNP V +G++ LRDAGI+V
Sbjct: 66 AHGATAYVTLEPCSHYGRTPPCAEALVKAQVSRVVCAMVDPNPRVAGRGIKMLRDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ + +LN FI R+ TG PF L+ S++G GE +G +Q
Sbjct: 126 QIGLLEAESHQLNVGFIKRMKTGMPFVQLKLAASLDGRTALANGESKWITGPDARADVQR 185
Query: 257 YDA---IILSASSTKKYSIPASQ---------------EPDANQPFRIITVS-NHASP 295
+ A ILS S+T P+ E QP+R++ S N +P
Sbjct: 186 FRAQAGAILSTSATVLADDPSLNVRWSELGETVQNSYPESSLRQPYRVVVDSQNRVTP 243
>gi|359428136|ref|ZP_09219175.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. NBRC
100985]
gi|358236457|dbj|GAB00714.1| riboflavin biosynthesis protein RibD [Acinetobacter sp. NBRC
100985]
Length = 366
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 133/190 (70%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
Q++ D ++M+R ++LA ST PNP VGCVIVKDG+++GEGFHP+AGQPHAEVFAL
Sbjct: 6 QDSLSQDQYWMQRAIQLARLGQYSTKPNPNVGCVIVKDGQLIGEGFHPQAGQPHAEVFAL 65
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R AGE A+ ATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L+
Sbjct: 66 RQAGENAKDATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACADPNPLVAGKGVKILQ 125
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
DAGI V G+ +++ K LN F+ + TG P+ L+ S++G GE +G
Sbjct: 126 DAGIAVETGICEDIAKTLNFGFLKAMATGLPYVRLKIASSLDGRTAMASGESKWITGTAA 185
Query: 251 SQLLQEYDAI 260
Q +Q + AI
Sbjct: 186 RQDVQHWRAI 195
>gi|126650091|ref|ZP_01722324.1| riboflavin specific deaminase [Bacillus sp. B14905]
gi|126593263|gb|EAZ87225.1| riboflavin specific deaminase [Bacillus sp. B14905]
Length = 375
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 168/307 (54%), Gaps = 26/307 (8%)
Query: 69 QVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVF 128
+V D YM+ ++LA A G+T+PNP+VG VIVK+ IVG G H KAG+PHAEV
Sbjct: 2 EVATMTNKDEKYMQLALDLAASAKGNTNPNPLVGAVIVKNDIIVGTGLHRKAGEPHAEVH 61
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
A R AGE A+ AT YV+LEPC+H+G+TPPC + ++ V +VVV M DPNP V +G++
Sbjct: 62 AFRMAGEHAKNATLYVTLEPCSHFGKTPPCANLVKESGVSRVVVAMQDPNPTVAGRGIQL 121
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG 248
LRDAGI V VGV ++ +RLNE FIH ++T +PF ++ ++V+G + G +G
Sbjct: 122 LRDAGIAVEVGVLEQQARRLNERFIHNMLTKRPFVISKFAMTVDGKIATHTGHSKWVTGD 181
Query: 249 YYSQ----LLQEYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPI----- 296
+ + E D I++ + + + E P RII S SP+
Sbjct: 182 AAREDVHHIRHEVDGILVGVGTVIADNPSLTTRLSEGYGKNPTRIIMDSLLRSPLDANVF 241
Query: 297 ---RIPGL----SEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHG 349
P + +E S KV FTD +TV P IE L LN+ +L Y HG
Sbjct: 242 NTEEAPTILVCSNEVSQEKVDSFTDKGLTVLP------IEKNEL-GLNIDEMLARLYEHG 294
Query: 350 FCSVLVD 356
+L++
Sbjct: 295 ITDILLE 301
>gi|307546181|ref|YP_003898660.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581]
gi|307218205|emb|CBV43475.1| riboflavin biosynthesis protein RibD [Halomonas elongata DSM 2581]
Length = 384
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 164/289 (56%), Gaps = 20/289 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
+M R + LA + +T+PNP VGCV+VK+G+++GEG+H +AG+PHAE+ ALR+AGE A G
Sbjct: 10 WMARALRLARHGLYTTAPNPRVGCVLVKEGRVIGEGWHERAGEPHAEIHALRNAGEAARG 69
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC+H GRT PC AL++A V +VVV M DPNP V +G+ERLR AGI+V G
Sbjct: 70 ATAYVTLEPCSHQGRTGPCAVALVEAGVARVVVAMRDPNPQVAGRGIERLRQAGIEVEEG 129
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG---GYYSQLLQE 256
V + LN FI R+ G+PF ++ +S++G + GE +G Q L+
Sbjct: 130 VLEAEAHALNSGFIARMARGRPFVRMKMAMSLDGRTAMRSGESQWITGPCARREVQRLRA 189
Query: 257 YDAIILSASST-----KKYSIPASQ-EPD------ANQPFRIITVSNHASPIRIPGLSEE 304
+++++ + + ++ A Q E D + QP R++ S P+ L E
Sbjct: 190 RSSVVMTGVESVIFDNSRLTVRAEQLELDNAEAIASRQPMRVVVDSRLRLPLAAACLREP 249
Query: 305 SSSKVIVFTDGEITVEPDMGTKGIETVNL-----HQLNLKAVLDYCYSH 348
+ V + + G E V L +++L+A+L Y SH
Sbjct: 250 GRTLVATVDGHDDEHREKLEQAGAEVVVLPAEEGGRVDLEALLSYLASH 298
>gi|423616393|ref|ZP_17592227.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD115]
gi|401258209|gb|EJR64395.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD115]
Length = 367
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 179/322 (55%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC H+GRT PC EA+++A +K+VVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCFHHGRTGPCAEAIVQAGIKRVVVATLDPNPLVSGRGIKMLQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+ +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILIKRPFVTIKSGITLDGKIATSLSDSKWITSTEARREVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ P R+I S +RIP + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDGEVPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAEKRKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ + P
Sbjct: 299 ----ASFIENKLIDKLILYIAP 316
>gi|380510433|ref|ZP_09853840.1| riboflavin biosynthesis protein RibD [Xanthomonas sacchari NCPPB
4393]
Length = 369
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 161/319 (50%), Gaps = 15/319 (4%)
Query: 69 QVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVF 128
Q + DD +M + + LA + +T PNPMVGCVIV+DG +VGEGFH +AG PHAEVF
Sbjct: 5 QARGFSADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGAVVGEGFHQRAGGPHAEVF 64
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
ALR AGE A GATAYV+LEPC HYGRTPPC ALI+A+V +VV M DP P VN G
Sbjct: 65 ALRAAGERARGATAYVTLEPCAHYGRTPPCALALIEAEVARVVAAMADPFPQVNGGGFAL 124
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG 248
LR+AGI V G+ + LN F+ R+ G+P+ ++ S++G GE +G
Sbjct: 125 LREAGIAVQSGLMQAQARALNRGFLSRVERGRPWLRIKLGASLDGRTALASGESKWITGA 184
Query: 249 YYSQLLQEYDA---IILSASSTKKYSIPA-----SQEPDANQPFRIITVSNHASPIRIPG 300
Q +Q + A IL+ + T PA +A P R++ + S +
Sbjct: 185 AARQDVQHWRARAGAILTGAGTVLADDPALTVRLDAATEAMPPLRVVLDAQLRS---LAQ 241
Query: 301 LSEESSSKVIVFTDGEITVEPDMGTKGIETVNLH--QLNLKAVLDYCYSHGFCSVLVDLR 358
S ++ V P + V LH + +L A L G V V+
Sbjct: 242 AKVRDGSAPTLYLHAPDCVPPTLDHATFAAVPLHDGRCDLHAALRLLGERGINEVQVEAG 301
Query: 359 GNYGDLEMLLKEGIEQNLL 377
LL+ G+ LL
Sbjct: 302 ATLSG--ALLRAGLVDELL 318
>gi|227327505|ref|ZP_03831529.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 378
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/239 (44%), Positives = 140/239 (58%), Gaps = 28/239 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 13 DELYMARALELARRGCFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAGER 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 73 ARGATAYVTLEPCSHHGRTPPCADALITAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAV 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 133 SHGLMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 192
Query: 257 Y---DAIILSASST--------------------KKYSIPASQEPDANQPFRIITVSNH 292
+ A ILS S+T K+YS E D QP R++ S
Sbjct: 193 FRAESAAILSTSATVLADDPSLTVRWSELGADVQKRYS-----ESDLRQPVRVVVDSQQ 246
>gi|417839538|ref|ZP_12485714.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M19107]
gi|341952285|gb|EGT78816.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M19107]
Length = 372
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 142/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LATK +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DRKFMQRALDLATKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGSDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATILADNPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|378768290|ref|YP_005196761.1| riboflavin biosynthesis protein RibD [Pantoea ananatis LMG 5342]
gi|386014894|ref|YP_005933171.1| riboflavin biosynthesis protein ribD [Pantoea ananatis AJ13355]
gi|386080423|ref|YP_005993948.1| riboflavin biosynthesis protein ribD [Pantoea ananatis PA13]
gi|327392953|dbj|BAK10375.1| riboflavin biosynthesis protein ribD [Pantoea ananatis AJ13355]
gi|354989604|gb|AER33728.1| riboflavin biosynthesis protein ribD [Pantoea ananatis PA13]
gi|365187774|emb|CCF10724.1| riboflavin biosynthesis protein RibD [Pantoea ananatis LMG 5342]
Length = 367
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 166/299 (55%), Gaps = 23/299 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 3 DERYMARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGEPHAEVHALRMAGDR 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLHRLHQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 123 SHGLMMQEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSPAARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA----SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L+ + ILS+S+T P+ E D ++ R++ + P+R
Sbjct: 183 LRAQSSAILSSSATVLADNPSLTVRWSELD-SESQRLVDEAELRQPVR------------ 229
Query: 310 IVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V D + V PD K IE + L + V D + + V LR + DL L+
Sbjct: 230 -VIVDSQNRVTPDH--KLIEQLGETWLMRQQVDDRHWPETVTQIPVPLRDSQLDLVALM 285
>gi|407705762|ref|YP_006829347.1| periplasmic binding protein [Bacillus thuringiensis MC28]
gi|407383447|gb|AFU13948.1| riboflavin biosynthesis protein RibD [Bacillus thuringiensis MC28]
Length = 367
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 179/322 (55%), Gaps = 25/322 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +K+V+V LDPNPIV+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKRVIVATLDPNPIVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + D E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYIMTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKV 309
E AI++ A++ +K + P+ ++ P+ RII S +RIP + + +
Sbjct: 186 NENAAILVGANTVQKDN-PSLTTRIPNGRNSIRIIL----DSTLRIPMEANVVTDGEAPT 240
Query: 310 IVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+FT E + G K T +NL +LD G S+L++ G
Sbjct: 241 WIFTTSNHAAEKKKALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
IE L+ KI++ P
Sbjct: 299 ----ASFIENKLMDKIILYFAP 316
>gi|335039510|ref|ZP_08532670.1| riboflavin biosynthesis protein RibD [Caldalkalibacillus thermarum
TA2.A1]
gi|334180578|gb|EGL83183.1| riboflavin biosynthesis protein RibD [Caldalkalibacillus thermarum
TA2.A1]
Length = 365
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 202/370 (54%), Gaps = 30/370 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM+ ++LA G TSPNP+VG VIVKD +IVG G H KAG+ HAEV AL A E
Sbjct: 6 DSYYMKLALQLAEATSGQTSPNPVVGAVIVKDFEIVGLGAHLKAGEAHAEVHALAMAKEK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+HYGRTPPC +A+I+A +K+VV+ DPNP+V +G+E+L+ AG++V
Sbjct: 66 AQGATMYVTLEPCSHYGRTPPCADAVIEAGIKRVVIAACDPNPLVRGRGVEKLKAAGLEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VG+ + +RLNE F + IV +PF TL+ +++G + GE E+
Sbjct: 126 EVGLFKKEAERLNEIFNYYIVHRRPFVTLKTATTLDGKIATVTGESQWITGEEARADVHL 185
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ----PFRIITVSNHASPIRIP---GLSEES 305
L +DAI++ ++ + + P A Q P R+I S +RIP ++
Sbjct: 186 LRHRHDAILVGINTVLRDN-PRLTTRIAGQSGRHPVRVIL----DSKLRIPLDAQVTHTE 240
Query: 306 SSKVIVFTDGEITVE--PDMGTKGIETVNLH---QLNLKAVLDYCYSHGFCSVLVDLRGN 360
+ +FT + E + KG++ V + +++++ VL Y G SVLV+
Sbjct: 241 QAPTWIFTTDQAPAERVKALTEKGVKVVKISSETRVDVEQVLAYLGEQGIASVLVE---G 297
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD---GGNPHTLLNSLGKRLILKNLQPKMS 417
G++ +G + K+V + P G + G + SL + L LK++ +
Sbjct: 298 GGEVNASFLQG---GFVNKVVAYLAPKLIGGNEAPGAFRGQGVLSLAQSLHLKDVSVETL 354
Query: 418 SQSIVLEGYL 427
Q + + GYL
Sbjct: 355 GQDLKVVGYL 364
>gi|291616522|ref|YP_003519264.1| RibD [Pantoea ananatis LMG 20103]
gi|291151552|gb|ADD76136.1| RibD [Pantoea ananatis LMG 20103]
Length = 367
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 166/299 (55%), Gaps = 23/299 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 3 DERYMARALELARRGRFTTTPNPNVGCVIVRDGQIVGEGWHQRAGEPHAEVHALRMAGDR 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLHRLHQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 123 SHGLMMQEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSPAARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA----SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L+ + ILS+S+T P+ E D ++ R++ + P+R
Sbjct: 183 LRAQSSAILSSSATVLADNPSLTVRWSELD-SESQRLVDEAELRQPVR------------ 229
Query: 310 IVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V D + V PD K IE + L + V D + + V LR + DL L+
Sbjct: 230 -VIVDSQNRVTPDH--KLIEQLGETWLMRQQVDDRHWPETVTQIPVPLRDSQLDLVALM 285
>gi|237797512|ref|ZP_04585973.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020362|gb|EGI00419.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 381
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 131/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA K + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 12 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGEGWHARAGEPHAEVHALRQAGEL 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL++A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 72 ARGATAYVTLEPCSHQGRTPPCADALVEAGLSRVVAAMQDPNPEVSGRGLLRLMNAGIGV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 132 QCGVLENEARALNKGFLKRMETGRPYIRVKLAMSLDGRTAMASGESQWITGPEARSAVQR 191
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 192 LRAQSSVVLTGADT 205
>gi|452994503|emb|CCQ93907.1| fused diaminohydroxyphosphoribosylaminopyrimidine
deaminase;5-amino-6-(5-phosphoribosylamino) uracil
reductase [Clostridium ultunense Esp]
Length = 364
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 196/368 (53%), Gaps = 25/368 (6%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D FYM LA G T PNPMVG VIVK+ +IVG G H KAG PHAEV AL+ AGE
Sbjct: 2 NDEFYMNLAFALAASTEGRTWPNPMVGAVIVKERRIVGFGAHLKAGTPHAEVHALKMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
AEG T YV+LEPC+HYGRTPPC + +I A +K+VVV LDPNP+V+ KG+E++R AGI
Sbjct: 62 EAEGGTLYVTLEPCSHYGRTPPCADQIIAAGLKRVVVATLDPNPLVSGKGVEKMRKAGIH 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYS 251
V VG+ +E KRLNE F H I +PF ++ ++++G + G+ SG Y
Sbjct: 122 VEVGLGEEKGKRLNEVFFHYITKRRPFTVVKMAMTLDGKIAAYTGDSRWVSGAAAREYVH 181
Query: 252 QLLQEYDAIILSASST-KKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKV 309
+L + DA+++ + + ++ P+ + P RI+ + P+ L ++ +
Sbjct: 182 RLRNQADAVMVGIGTVLADDPLLTTRLPEGGRNPLRIVVDTRLRIPLTARVLDTSAAPTL 241
Query: 310 IVFTDGEITVE-PDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
I +G + + KG E + L + ++LK +L +LV+ G
Sbjct: 242 IACGEGADAAKMAQLREKGAEVLPLPEREGRVDLKELLRLLGLREIAFLLVE-----GGA 296
Query: 365 EM---LLKEGIEQNLLQKIVVEVLPVWNGSDGGNPH--TLLNSLGKRLILKNLQPKMSSQ 419
EM LL EG L+ K+++ + P G G P + + L L +Q + +
Sbjct: 297 EMNGSLLMEG----LVDKVLLFLSPKLIGGKGPTPFGGKGFPRMDEALPLTEVQVEKVGE 352
Query: 420 SIVLEGYL 427
++GYL
Sbjct: 353 DWFIQGYL 360
>gi|168214536|ref|ZP_02640161.1| riboflavin biosynthesis protein RibD [Clostridium perfringens CPE
str. F4969]
gi|170714018|gb|EDT26200.1| riboflavin biosynthesis protein RibD [Clostridium perfringens CPE
str. F4969]
Length = 366
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 170/299 (56%), Gaps = 15/299 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVK G+I+G+G+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGNHAEINAINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K K+VVVG LDPNP+V+ KG+ LR++GI+V
Sbjct: 62 IEGATIYVTLEPCCHYGKTPPCVEAIIKNKFKRVVVGTLDPNPLVSGKGIRILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV----LDQLGEGVAESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + +S +
Sbjct: 122 NVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKDFKSKWTTNKKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L +S S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQSES 241
Query: 308 KVIVFTDG--EITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT + + KGIE + ++ ++N+ VL SVL++ GN
Sbjct: 242 KTLIFTTNKKDKMKNEKLKDKGIEVIEVNLDEGKININQVLACLKEKNIDSVLIEGGGN 300
>gi|416999159|ref|ZP_11939828.1| riboflavin biosynthesis protein RibD [Veillonella parvula
ACS-068-V-Sch12]
gi|333977312|gb|EGL78171.1| riboflavin biosynthesis protein RibD [Veillonella parvula
ACS-068-V-Sch12]
Length = 404
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 117/166 (70%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM+R +ELA A G TSPNP+VG V+VKD I+GEG+H KAG HAEV AL AG+
Sbjct: 3 DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAGD 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYG+TPPC +I+A + KV+VG DPNP+V+ KG+E LR+AGI
Sbjct: 63 NAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGMELLREAGIK 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V V + C LNE F I TGKPF T++ +S++G + G+
Sbjct: 123 VVCPVCSDECAELNEHFFTYIQTGKPFVTIKSAMSLDGKIATSTGQ 168
>gi|294793755|ref|ZP_06758892.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44]
gi|294455325|gb|EFG23697.1| riboflavin biosynthesis protein RibD [Veillonella sp. 3_1_44]
Length = 403
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 117/166 (70%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM+R +ELA A G TSPNP+VG V+VKD I+GEG+H KAG HAEV AL AG+
Sbjct: 2 DDVVYMKRAIELAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAGD 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYG+TPPC +I+A + KV+VG DPNP+V+ KG+E LR+AGI
Sbjct: 62 NAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVIVGSTDPNPLVSGKGMELLREAGIK 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V V + C LNE F I TGKPF T++ +S++G + G+
Sbjct: 122 VVCPVCSDECAELNEHFFTYIQTGKPFVTIKSAMSLDGKIATSTGQ 167
>gi|239827589|ref|YP_002950213.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
gi|239807882|gb|ACS24947.1| riboflavin biosynthesis protein RibD [Geobacillus sp. WCH70]
Length = 361
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 158/271 (58%), Gaps = 10/271 (3%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
++D YMR +E+A +G TSPNP+VG V+VKDG+IVG G H KAG+ HAEV A+R AG
Sbjct: 2 RNDEQYMRLAIEIAKAGIGQTSPNPVVGAVVVKDGEIVGFGAHLKAGELHAEVHAIRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+G+T YV+LEPC+HYG+TPPC + L++ V++VV+ DPNP+V KG+E+LR AGI
Sbjct: 62 EKAKGSTVYVTLEPCSHYGKTPPCADLLVETGVQRVVIATTDPNPLVAGKGIEKLRSAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
DV +GV E LN F H I PF TL+Y S++G + GE + + +
Sbjct: 122 DVKLGVLKEEADELNRVFFHYIAAKTPFVTLKYASSLDGKIATTTGESKWITSEAAREDV 181
Query: 255 QEY----DAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
Y DAI++ ++ S+ P RI+ ++ +P+ L++ +
Sbjct: 182 HRYRAVHDAILVGVNTVIADNPSLTVRLPEGGKNPIRIVLDTHLRTPLDANILNDGQAET 241
Query: 309 VIVFTDGEITVEPDMGTKGIETVNLHQLNLK 339
IV EI+VE K E N+ +++K
Sbjct: 242 WIV-VGSEISVEK---RKRYEKENVQIISMK 268
>gi|317128514|ref|YP_004094796.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM
2522]
gi|315473462|gb|ADU30065.1| riboflavin biosynthesis protein RibD [Bacillus cellulosilyticus DSM
2522]
Length = 362
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 186/327 (56%), Gaps = 19/327 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA G T+PNP+VG VIV + +IVG G H KAG+ HAE A+ A +
Sbjct: 2 DNKYMKMAIELAKVTEGHTTPNPVVGAVIVNNNQIVGFGAHLKAGEHHAEKHAIEMAKDK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC+HYGRTPPC +A+I+A +KKV++G +DPNP V+ +G+++L DAGI+V
Sbjct: 62 TEGATIYVTLEPCSHYGRTPPCADAVIEAGIKKVIIGSVDPNPKVSGRGIKKLEDAGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQ 252
VG E +LN+ F H + T KPF TL+ S++G + + GE ES Q
Sbjct: 122 EVGCMKEETDKLNDVFFHFVNTKKPFVTLKSATSLDGKIATRTGESQWITSEESRKDVHQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA--SQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKV 309
L + DAI++ ++ K PA ++ PD + P R+I P+ +++ +S
Sbjct: 182 LRHKNDAILVGINTVIKDD-PALTTRLPDGGKNPIRVILDRELRIPMTAKLINDHASLTW 240
Query: 310 IVFT----DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
++ T +I + D GTK + ++ ++ + ++L H S+LV+ G D
Sbjct: 241 VITTRLANKEKIDLLRDKGTK-VLILDDDKIEISSLLYLLGEHNITSLLVEGGGTVND-- 297
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSD 392
LK G Q+++V + P+ G +
Sbjct: 298 SFLKSG----EFQQVIVYIAPLLIGGE 320
>gi|253681051|ref|ZP_04861854.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str.
1873]
gi|253562900|gb|EES92346.1| riboflavin biosynthesis protein RibD [Clostridium botulinum D str.
1873]
Length = 372
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 201/372 (54%), Gaps = 32/372 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+R +EL+ +G T PNP+VG +IVKD KI+GEG+H + G+ HAE+ AL++A E
Sbjct: 2 DLSYMKRAIELSKLGIGYTYPNPLVGAIIVKDNKIIGEGYHKRFGENHAEINALKNAKED 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GAT YV+LEPC+HYG+TPPC A+IK+ +KKV++GM DPNP+V +G L+D GI+V
Sbjct: 62 VSGATMYVTLEPCSHYGKTPPCVNAIIKSGIKKVIIGMSDPNPLVAGRGTRILKDNGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ E K++NE FI I T PF L+ ++++G + + G+ S Q + E
Sbjct: 122 VEGILKEEVKKVNEIFIKYITTKLPFCILKTAMTLDGKIATRDGDSKWISNEVSRQYVHE 181
Query: 257 YD---AIILSASSTKKYSIPASQEPDANQP----FRIITVSNHASPIRIPGLSEESSSKV 309
A I+ T P+ N+ RII S PI L+ ES +K
Sbjct: 182 IRHKVAGIMVGIGTIIKDNPSLTTRIINKKGRDSTRIIVDSKGRIPIEAKVLNLESQAKT 241
Query: 310 IVFTD-----GEITVEPDMGTKGIET-VNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
I+ T +I V D G + I T + ++++LK +++ S+L++ G
Sbjct: 242 IIVTTELANREKIEVIRDKGAEVIITPLCDNRVDLKYLMEELGKRNIDSILLE-----GG 296
Query: 364 LEM---LLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPK 415
E+ +L +GI + K++ + P G G T + LGK I L+N++
Sbjct: 297 AELNYSVLNKGI----VDKVISFISPKIIG--GKEAKTPVEGLGKSTISEGINLENIKVS 350
Query: 416 MSSQSIVLEGYL 427
+ IV+EGY+
Sbjct: 351 RFQEDIVIEGYI 362
>gi|220929424|ref|YP_002506333.1| riboflavin biosynthesis protein RibD [Clostridium cellulolyticum
H10]
gi|219999752|gb|ACL76353.1| riboflavin biosynthesis protein RibD [Clostridium cellulolyticum
H10]
Length = 367
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 201/365 (55%), Gaps = 22/365 (6%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
FYM+R +E+A + G T+PNP+VG VI K+GKI+ EGFH G HAEV A +A
Sbjct: 6 FYMKRTLEIAKEGWGRTNPNPLVGAVIAKNGKIISEGFHEALGCAHAEVCAFSNAPTDIS 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+HYGRTPPC +A+I + +K+VVV M+DPNP V+ KG++ L+DA I+V V
Sbjct: 66 GATLYVNLEPCSHYGRTPPCVKAIIDSGIKEVVVAMVDPNPKVSGKGIQMLKDANINVIV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY---YSQLLQ 255
GV +E K+LNE FIH I PF ++ ++++G + G+ SG Y Y ++
Sbjct: 126 GVLEEEAKKLNEIFIHYITKRLPFVIMKTAMTLDGKIASVTGDSKWISGEYSREYVHAIR 185
Query: 256 EYDAIILSASSTKKYSIPA-SQEPDANQ---PFRIITVSNHASPIRIPGLSEESSSKVIV 311
+ I+ +T P+ + P + + P RI+ S+ PI + +S + +I+
Sbjct: 186 NRVSSIMVGVNTVINDNPSLTARPISGKGIDPVRIVVDSSGRIPIESRVIQSDSEAGLIL 245
Query: 312 FTDGEI--TVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
T +I E + ++G+ + ++NL+ +++ Y SVL++ G
Sbjct: 246 ATTEKIHKDKETQLLSRGVRIIKTAPKNGKVNLRELMEELYKLEIDSVLLEGGGT----- 300
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIV 422
L +E ++ K++ + P + GS P + + + L +++ + + ++
Sbjct: 301 -LNFSALEAGIVNKVMTFISPKIIGGSSAVTPVGGKGIEKMKDAIALSDIRVERFDRDVL 359
Query: 423 LEGYL 427
+EGY+
Sbjct: 360 IEGYV 364
>gi|138895866|ref|YP_001126319.1| riboflavin biosynthesis protein RibD [Geobacillus
thermodenitrificans NG80-2]
gi|134267379|gb|ABO67574.1| Riboflavin biosynthesis protein RibD [Geobacillus
thermodenitrificans NG80-2]
Length = 359
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 138/224 (61%), Gaps = 10/224 (4%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
MR +++A VG TSPNP VG V+V DG IVG G H KAG+PHAEV A+R AGE A GA
Sbjct: 1 MRLALDVAKAGVGQTSPNPAVGAVVVNDGTIVGIGAHLKAGEPHAEVHAIRMAGEKARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+HYG+TPPC + LI+A V++VVV DPNP+V KG+ +LR AGIDV VG+
Sbjct: 61 TVYVTLEPCSHYGKTPPCADLLIEAGVRRVVVATTDPNPLVAGKGINKLRRAGIDVEVGI 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGY--YSQLLQE 256
E LN F H I T PF T++Y S++G + GE + S +L +
Sbjct: 121 LKEEADELNRMFFHYIATKTPFVTIKYACSLDGKIATATGESKWITSSAAREDVHRLRAQ 180
Query: 257 YDAIILSASSTK----KYSIPASQEPDANQPFRIITVSNHASPI 296
+DAI++ ++ K ++ Q+ P R+I +N +P+
Sbjct: 181 HDAILVGVNTVMADNPKLTVRIGQQ--RKNPLRVILDTNLHTPL 222
>gi|182626736|ref|ZP_02954476.1| riboflavin biosynthesis protein RibD [Clostridium perfringens D
str. JGS1721]
gi|177907904|gb|EDT70496.1| riboflavin biosynthesis protein RibD [Clostridium perfringens D
str. JGS1721]
Length = 366
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 178/300 (59%), Gaps = 17/300 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVKDG+I+G+G+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKDGEIIGQGYHEFFGGNHAEINAINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK + K+VVVG LDPNP+V+ K ++ LR++GI+V
Sbjct: 62 TEGATIYVTLEPCCHYGKTPPCVEAIIKNRFKRVVVGNLDPNPLVSGKSIKILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL--DQLGEGVA--ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + D + + +S +
Sbjct: 122 KVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKDFKSKWITNKKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L ++ S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQNES 241
Query: 308 KVIVFTDG---EITVE--PDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT +I E D+G + IE VNL + +N+ VL+ SVL++ GN
Sbjct: 242 KTLIFTTNKKDKIKNEKLKDIGIEVIE-VNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|398865864|ref|ZP_10621373.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM78]
gi|398242313|gb|EJN27932.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM78]
Length = 377
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGEPHAEVHALRAAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|90579822|ref|ZP_01235630.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
angustum S14]
gi|90438707|gb|EAS63890.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
angustum S14]
Length = 374
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 146/238 (61%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI +I+GEGFH +AG+PHAEVFAL+ AG
Sbjct: 6 DTRLMLRAIQLAKRGCFTTAPNPNVGCVIANGDEILGEGFHYRAGEPHAEVFALKQAGVR 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC EALIK+ V +V+ M+DPNP+V +G+E L+ AG+DV
Sbjct: 66 AKGATAYVTLEPCSHYGRTPPCAEALIKSGVSRVICAMVDPNPLVAGRGVEMLQKAGVDV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + +N+AFI ++ T P+ L+ S++G GE +G Y +Q
Sbjct: 126 QVGLLKEEAQAINKAFIKQMTTKMPYVELKLASSLDGKTALANGESKWITGPYARADVQR 185
Query: 257 YDA---IILSASST---------KKYSIPASQ------EPDANQPFRIITVS-NHASP 295
+ A ILS S+T ++S +Q + D QP R+I S N +P
Sbjct: 186 HRAQAGAILSTSATVMADDPSLNVRWSELGTQIQDEYPQADVRQPIRVIIDSQNRLTP 243
>gi|322420507|ref|YP_004199730.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18]
gi|320126894|gb|ADW14454.1| riboflavin biosynthesis protein RibD [Geobacter sp. M18]
Length = 374
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/239 (41%), Positives = 144/239 (60%), Gaps = 5/239 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
MR + A K VG T+PNP VGCVIV+DG++VG+G+H KAG PHAEV ALR AGELA G
Sbjct: 8 MMRLALSEARKGVGKTAPNPAVGCVIVRDGEVVGKGWHKKAGTPHAEVHALRAAGELAAG 67
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A AYV+LEPC+H+G+TPPC ALI+A+V +V V M+DPNP+V+ +G++ L+DAGI+V VG
Sbjct: 68 ADAYVTLEPCSHFGKTPPCARALIEARVGRVFVAMVDPNPLVSGRGIKMLQDAGIEVEVG 127
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQ 255
+ + +N F+ I+T +P+ L+ L+++G G+ S +L
Sbjct: 128 LLEAESLEINRPFVKWILTKRPYVVLKSALTLDGKSATATGDSKWVTCDRSRREVHRLRG 187
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
DAI++ + K + + P P R+I S P S S +K ++ T
Sbjct: 188 RLDAIMVGVGTVIKDDPLLTCRVPGGKDPLRVIVDSTLRIPRHAALFSLRSEAKTVIAT 246
>gi|440229709|ref|YP_007343502.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Serratia
marcescens FGI94]
gi|440051414|gb|AGB81317.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Serratia
marcescens FGI94]
Length = 370
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YM R ELA +T+PNP VGCVIV+DGKIVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 NDQLYMARAFELARLGRFTTAPNPNVGCVIVRDGKIVGEGYHLRAGEPHAEVHALRMAGE 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 63 LARGATAYVTLEPCSHHGRTPPCADALINAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + +N F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 VSHGLMLAEAEAVNRGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 182
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
L+ A ILS+S+T P+ E DA+ QP RII S N +P
Sbjct: 183 RLRAESAAILSSSATVLADDPSLTVRWDELDADTQRFYPREHLRQPLRIILDSQNRVTP 241
>gi|378774453|ref|YP_005176696.1| riboflavin biosynthesis protein RibD [Pasteurella multocida 36950]
gi|356597001|gb|AET15727.1| riboflavin biosynthesis protein RibD [Pasteurella multocida 36950]
Length = 376
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 135/234 (57%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 8 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC + LI A V KVV M DPNP V +GL L DAGI+
Sbjct: 68 ARGATAYVTLEPCSHVGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLRMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 128 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 187
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 188 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 241
>gi|269138330|ref|YP_003295030.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202]
gi|387867049|ref|YP_005698518.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Edwardsiella tarda FL6-60]
gi|267983990|gb|ACY83819.1| riboflavin biosynthesis protein RibD [Edwardsiella tarda EIB202]
gi|304558362|gb|ADM41026.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Edwardsiella tarda FL6-60]
Length = 373
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA + +T+PNP VGCV+V+D +IVGEGFH +AG+PHAEV ALR AGEL
Sbjct: 9 DEFYMARAFELARRGRFTTTPNPNVGCVLVRDDRIVGEGFHLRAGEPHAEVHALRMAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 69 ARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGLYRLQQAGISV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + +N+ F+ R+ TG P+ L+ S++G GE + +Q
Sbjct: 129 RHGVMLAEAEAINKGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSAAARADVQR 188
Query: 257 YDA---IILSASSTKKYSIPA 274
Y A ILS+S+T PA
Sbjct: 189 YRAQSSAILSSSATVLADDPA 209
>gi|206578559|ref|YP_002240118.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae 342]
gi|206567617|gb|ACI09393.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae 342]
Length = 367
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 145/238 (60%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LAT+ +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARALKLATRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|260886861|ref|ZP_05898124.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
35185]
gi|330839340|ref|YP_004413920.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
35185]
gi|260863460|gb|EEX77960.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
35185]
gi|329747104|gb|AEC00461.1| riboflavin biosynthesis protein RibD [Selenomonas sputigena ATCC
35185]
Length = 367
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/373 (33%), Positives = 189/373 (50%), Gaps = 32/373 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +MR + LA A G T+PNP+VG VIV++G+IVG G+H KAG PHAEV AL AG
Sbjct: 2 QQDEDFMREALLLAANARGRTAPNPLVGAVIVREGRIVGAGWHRKAGTPHAEVHALAMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+LA GAT YV+LEPC+H+GRT PC EAL+KA VK+VV MLDPNP+V KG L AG+
Sbjct: 62 DLAHGATVYVTLEPCSHHGRTGPCAEALVKAGVKRVVTAMLDPNPLVAGKGKAMLEAAGV 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+VTVGV E +RLNEA++ + PF TL+ ++++G + G+ +G + +
Sbjct: 122 EVTVGVLAEEARRLNEAYLKWVTEKLPFVTLKTAMTLDGKIATAAGKSQWITGEAARRRV 181
Query: 255 QEY----DAIILSASSTKKYSIPASQ---EPDANQPFRIITVSNHASPIRIPGLSEESSS 307
E DAI++ + + + P R+I S +P+ + + ++
Sbjct: 182 HEMRDVADAIVVGIGTVLADDPSLTTRLVDGTGRNPVRVIVDSRARTPLAATVVQDGAAK 241
Query: 308 KVIVFTDGEITVEPD-----MGTKGIETVNL---HQLNLKAVLDYCYSHGFCSVLVDLRG 359
++ T P+ + G+E V +++L ++ + SV V+ G
Sbjct: 242 TLVAVT----CAAPEERCAALEAAGVEVVRAGEGERVDLATLMRLLAARDMTSVFVEGGG 297
Query: 360 --NYGDLEMLLKEGIEQNLLQKIV---VEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQP 414
N+ L L + I + KIV + PV L +L L
Sbjct: 298 TLNFSLLAAGLVDKIHAFIAPKIVGGKAALTPVEGAG--------FAELADAAVLTRLTA 349
Query: 415 KMSSQSIVLEGYL 427
+ I+L GY+
Sbjct: 350 EQVGADILLTGYV 362
>gi|300818262|ref|ZP_07098473.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1]
gi|415873807|ref|ZP_11540980.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 79-10]
gi|432804492|ref|ZP_20038438.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE91]
gi|432932748|ref|ZP_20132602.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE184]
gi|433192341|ref|ZP_20376363.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE90]
gi|300529153|gb|EFK50215.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 107-1]
gi|342930611|gb|EGU99333.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 79-10]
gi|431357825|gb|ELG44491.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE91]
gi|431456781|gb|ELH37124.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE184]
gi|431721817|gb|ELJ85809.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE90]
Length = 367
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|443468797|ref|ZP_21059004.1| Riboflavin-specific deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes KF707]
gi|442898016|gb|ELS24833.1| Riboflavin-specific deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes KF707]
Length = 368
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K + ST PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR A E
Sbjct: 5 DQAFMARALELARKGLYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRQAAER 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL DAGI V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRGLKRLEDAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ GV + K LN FI R+ G PF ++ +S++G GE +G +Q
Sbjct: 125 SSGVLEAEAKALNAGFIKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 184
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 185 LRARASVVLTGADT 198
>gi|423581589|ref|ZP_17557700.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD014]
gi|423635898|ref|ZP_17611551.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD156]
gi|401215079|gb|EJR21799.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD014]
gi|401276448|gb|EJR82400.1| riboflavin biosynthesis protein RibD [Bacillus cereus VD156]
Length = 367
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 180/319 (56%), Gaps = 19/319 (5%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
YM+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R A E A
Sbjct: 6 LYMKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAEEQAR 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V V
Sbjct: 66 GGTIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E K++NE F I+T +PF T++ ++++G + L + E+ Q+
Sbjct: 126 GVCEEESKKMNEVFNKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIR 185
Query: 255 QEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVF 312
E AI++ A++ ++ + P+ ++ P+ P R+I S P+ ++ + + +F
Sbjct: 186 NENAAILVGANTVQEDN-PSLTTRIPNGRNPIRVILDSTLRIPMEAKVIT-DGEAPTWIF 243
Query: 313 TDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T E + G K T +NL +LD G S+L++ G
Sbjct: 244 TTSNHAAEKKKALENAGVKVFVTSGEKHINLYEMLDVLGEKGVSSLLIEGGGEVN----- 298
Query: 368 LKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ + P
Sbjct: 299 -ASFIENKLIDKLILYIAP 316
>gi|422683152|ref|ZP_16741414.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|331012488|gb|EGH92544.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 249
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|301381786|ref|ZP_07230204.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato Max13]
gi|302061014|ref|ZP_07252555.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato K40]
gi|302130534|ref|ZP_07256524.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 378
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA K + ST PNP VGCVIV+DG+IVG+G+H +AG+PHAEV ALR+AGEL
Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI A + +VV M DPNP V GL RL AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ FI R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|313895132|ref|ZP_07828689.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
137 str. F0430]
gi|312976027|gb|EFR41485.1| riboflavin biosynthesis protein RibD [Selenomonas sp. oral taxon
137 str. F0430]
Length = 386
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 163/293 (55%), Gaps = 16/293 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M + LA A G TSPNP+VG VIV+DG +VG G+H AG+PHAE+ ALR AGEL
Sbjct: 25 DEHFMWEALHLAEFARGRTSPNPLVGAVIVRDGIVVGSGWHRAAGEPHAEIHALRMAGEL 84
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRT PC EA+I A + +VV + DPNP+V G+ERLR AGI+V
Sbjct: 85 ARGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGIERLRAAGIEV 144
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
T GV E +R NE F+ +VT +PF TL+ ++++G + G +G + E
Sbjct: 145 TTGVLSEEARRQNEVFLKWVVTKRPFVTLKTAMTLDGKTASRTGASQWITGAEARMRVHE 204
Query: 257 Y----DAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+ DAI +L+ + + +P P R++ S +P L++ ++
Sbjct: 205 WRDAHDAILVGIGTVLADNPSLTVRLP---HRTGKNPVRVVLDSTARTPHDAKLLTDGAA 261
Query: 307 SKVIVFTDGEITVEPDMGTK-GIETVNL--HQLNLKAVLDYCYSHGFCSVLVD 356
+I ++ + G E V ++++ A++D+ SV V+
Sbjct: 262 RTIIAVSERAAPKRTALLQACGAEVVTFGRERVDIPALMDFLGREELTSVFVE 314
>gi|339485448|ref|YP_004699976.1| riboflavin biosynthesis protein RibD [Pseudomonas putida S16]
gi|338836291|gb|AEJ11096.1| riboflavin biosynthesis protein RibD [Pseudomonas putida S16]
Length = 378
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGER 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 71 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 131 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 190
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 191 LRARSSVVLTSATS 204
>gi|422597937|ref|ZP_16672204.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330988221|gb|EGH86324.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 378
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|289647764|ref|ZP_06479107.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 378
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|323141090|ref|ZP_08075995.1| riboflavin biosynthesis protein RibD [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414466|gb|EFY05280.1| riboflavin biosynthesis protein RibD [Phascolarctobacterium
succinatutens YIT 12067]
Length = 388
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 133/191 (69%), Gaps = 5/191 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM+R +ELA +A G+TSPNPMVGCVIV +G IVGEG+H KAG+PHAEV AL +A +
Sbjct: 17 DEAYMQRALELALQAEGNTSPNPMVGCVIVDAEGNIVGEGYHHKAGEPHAEVNALAEAKQ 76
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
+A+GATAYV+LEPC HYGRT PC AL +A + KVVV LDPNP V +GLE LR GI+
Sbjct: 77 MAQGATAYVTLEPCAHYGRTGPCCVALARAGIGKVVVACLDPNPKVAGQGLEYLRLQGIE 136
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYS 251
V GV ++ KRLNE F I +PF TL+Y ++++G + G+ E+ +
Sbjct: 137 VVTGVCEKEAKRLNERFFTWITKQRPFITLKYAMTLDGKIATATGDSKWITGEEARTFAH 196
Query: 252 QLLQEYDAIIL 262
+L +++DA+++
Sbjct: 197 RLRKQHDAVLV 207
>gi|308185884|ref|YP_003930015.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Pantoea vagans C9-1]
gi|308056394|gb|ADO08566.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Pantoea vagans C9-1]
Length = 366
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 142/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 2 DERYMARALELARRGRFTTMPNPNVGCVIVRDGEVVGEGWHQRAGEPHAEVHALRMAGEK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL AGIDV
Sbjct: 62 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVIRVVAAMQDPNPQVAGRGLHRLHQAGIDV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE +E+ Q
Sbjct: 122 SHGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSEAARRDVQR 181
Query: 254 LQEYDAIILSASSTKKYSIPA-----------SQ----EPDANQPFRIITVS-NHASP 295
L+ A ILS+S+T P+ SQ E QP R+I S N +P
Sbjct: 182 LRAQSAAILSSSATVLADDPSLTVRWSELNTDSQALVDEQQLRQPVRVIIDSQNRVTP 239
>gi|168210245|ref|ZP_02635870.1| riboflavin biosynthesis protein RibD [Clostridium perfringens B
str. ATCC 3626]
gi|170711633|gb|EDT23815.1| riboflavin biosynthesis protein RibD [Clostridium perfringens B
str. ATCC 3626]
Length = 365
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 174/299 (58%), Gaps = 15/299 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVK G+I+G+G+H G HAE+ ++ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGNHAEINSINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K+K+VVVG LDPNP+V+ K ++ LR++GI+V
Sbjct: 62 TEGATIYVTLEPCCHYGKTPPCVEAIIKNKLKRVVVGTLDPNPLVSGKSIKILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + + + +S +
Sbjct: 122 KVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKEFKSKWITNRKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L +S S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQSES 241
Query: 308 KVIVFTDG--EITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT + + KGIE + ++ ++N+ VL+ SVL++ GN
Sbjct: 242 KTLIFTTNKKDKIKNEKLKDKGIEVIEVNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|424925146|ref|ZP_18348507.1| RibD [Pseudomonas fluorescens R124]
gi|404306306|gb|EJZ60268.1| RibD [Pseudomonas fluorescens R124]
Length = 377
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K +T PNP VGCVIV+DG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 11 DAHFMARALQLARKGHYTTHPNPRVGCVIVRDGQIVGEGFHERAGEPHAEVHALRAAGER 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL DAGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVTAGVARVVAAMRDPNPQVAGRGLQRLTDAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + ++LN+ F+ R+ G PF ++ +S++G GE +G Q
Sbjct: 131 ESGVLEAEARQLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMDSGESQWITGPAARSAVQR 190
Query: 254 LQEYDAIILSASST 267
L+ A++L+ + T
Sbjct: 191 LRAQAAVVLTGADT 204
>gi|419756849|ref|ZP_14283194.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PADK2_CF510]
gi|384396604|gb|EIE43022.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PADK2_CF510]
Length = 373
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + + LN FI R+ G PF ++ +S++G GE S Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LSA+ T
Sbjct: 185 LRARSSVVLSAADT 198
>gi|333898884|ref|YP_004472757.1| riboflavin biosynthesis protein RibD [Pseudomonas fulva 12-X]
gi|333114149|gb|AEF20663.1| riboflavin biosynthesis protein RibD [Pseudomonas fulva 12-X]
Length = 372
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV+DGKIVGEG+H KAG+PHAEV ALR AG+
Sbjct: 5 DHAYMARALELARKGLYSTHPNPRVGCVIVRDGKIVGEGWHAKAGEPHAEVHALRQAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A + +VV M DPNP V +GL RL +AGI V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCADALIAAGITRVVAAMQDPNPEVAGRGLLRLMNAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + LN FI R+ TG P ++ +S++G GE +G Q
Sbjct: 125 QGGVLGAEARALNAGFIKRMETGLPLVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|242240315|ref|YP_002988496.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech703]
gi|242132372|gb|ACS86674.1| riboflavin biosynthesis protein RibD [Dickeya dadantii Ech703]
Length = 370
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 143/233 (61%), Gaps = 18/233 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R +ELA + + +TSPNP VGCVIV+DG++VGEGFH KAG+PHAEV ALR AG+
Sbjct: 6 DEFYMARALELARRGIFTTSPNPNVGCVIVRDGEVVGEGFHQKAGEPHAEVHALRMAGDK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL AGI+V
Sbjct: 66 AQGATVYVTLEPCSHHGRTPPCADALIAAGVARVVAAMQDPNPQVAGRGLHRLHQAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + +N F+ R+ TG P+ L+ SV+G GE + Q +Q
Sbjct: 126 CHGVMADAAENINRGFLKRMRTGFPYVQLKMGASVDGRTAMASGESQWITSPQARQDVQR 185
Query: 257 YDA---IILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVSN 291
+ A ILS+S+T P+ QE DA+ QP RII S
Sbjct: 186 FRARSSAILSSSATVLADDPSLAVRWQELDADTQRIYPQESLRQPVRIIVDSQ 238
>gi|419157753|ref|ZP_13702279.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6D]
gi|419162686|ref|ZP_13707166.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6E]
gi|378014227|gb|EHV77133.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6D]
gi|378017152|gb|EHV80027.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC6E]
Length = 367
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 146/239 (61%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
++GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 SKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 241
>gi|71735090|ref|YP_276623.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|416018829|ref|ZP_11565757.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. B076]
gi|416024440|ref|ZP_11568501.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422403477|ref|ZP_16480535.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
gi|71555643|gb|AAZ34854.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322801|gb|EFW78894.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330413|gb|EFW86392.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330874037|gb|EGH08186.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 378
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|153940820|ref|YP_001392147.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
Langeland]
gi|384463135|ref|YP_005675730.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
230613]
gi|152936716|gb|ABS42214.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
Langeland]
gi|295320152|gb|ADG00530.1| riboflavin biosynthesis protein RibD [Clostridium botulinum F str.
230613]
Length = 365
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 199/376 (52%), Gaps = 36/376 (9%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++VK+ KI+GEG+H G PHAEV+ALR+AG
Sbjct: 2 EDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E+++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+V G+ ++ K+LNE FI I KPF L+ +++G + + GE E Y
Sbjct: 122 EVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATRTGESKWITGEEARYKV 181
Query: 252 QLLQEYDAIILSASST--KKYSIPASQEPDANQPFRIITVSNHASPIRIP---GLSEESS 306
Q ++ + I+ T K + ++ P II SN +RIP + E +
Sbjct: 182 QQIRNDLSGIMVGIDTVIKDNPLLTTRIEGGRSPKAIIVDSN----LRIPLESKILETFN 237
Query: 307 SKVIVFTDGEITVEP-------DMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDL 357
+ I + P ++G K +E + + L ++ Y S G S+L L
Sbjct: 238 KRAIYIAATKKHKNPSKKNALENLGAKVLEFEENEEGKVPLNELMQYLVSEGVDSIL--L 295
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKN 411
G LKEGI + K++ + P + G D GGN + SL L+N
Sbjct: 296 EGGSTLNFSALKEGI----VDKVMCFIAPKIMGGQDSKNMIGGNG---VESLKDIFKLEN 348
Query: 412 LQPKMSSQSIVLEGYL 427
L+ + Q I++EGY+
Sbjct: 349 LKFEKIGQDILIEGYV 364
>gi|406937684|gb|EKD71067.1| Pyrimidine reductase/pyrimidine deaminase [uncultured bacterium]
Length = 359
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 182/326 (55%), Gaps = 22/326 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
Y+ +ELA + + SPNPMVGCVIVK+ IVG+G+H +AG HAE+ ALR+AG AE
Sbjct: 9 YISLALELAERGRLTVSPNPMVGCVIVKNNTIVGQGYHQRAGDAHAEINALRNAGSKAEN 68
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC H G+TPPC A+I+A++KKVVV LDPNP+++ K + L++AGI+V +G
Sbjct: 69 ATMYVTLEPCCHVGKTPPCVNAIIQAQIKKVVVACLDPNPLMSGKSISILQNAGIEVDIG 128
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQ 255
+ ++ K LNE F H I T +PF ++ +S++G + D AES L +
Sbjct: 129 ICEQEAKTLNEIFFHYITTKRPFVIAKWAMSIDGQTITHPEDNRQISCAESHKQTHHLRE 188
Query: 256 EYDAIILSASSTKK----YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
+ DAI++ A++ + ++ + P + P RII S P + S +K I+
Sbjct: 189 QVDAILIGANTARVDNPLLTVRLGESPR-HHPIRIILSSTGQLPENLNLFSHSLPAKTII 247
Query: 312 FTDGEITVE--PDMGTKGIETV----NLH-QLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+I + IE + N H Q+++K +L+ S+LV+ G +
Sbjct: 248 VATEKICSQLINQYQKNNIELLIIKSNQHGQVDIKNLLEELGKRHITSLLVE-----GGM 302
Query: 365 EMLLKEGIEQNLLQKIVVEVLPVWNG 390
+ + + L+ KI V + PV+ G
Sbjct: 303 -TIHQHFFAEKLVNKIHVYIAPVFIG 327
>gi|422590466|ref|ZP_16665121.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330877574|gb|EGH11723.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 378
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA K + ST PNP VGCVIV+DG+IVG+G+H +AG+PHAEV ALR+AGEL
Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI A + +VV M DPNP V GL RL AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLLRLMTAGISV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ FI R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|374334970|ref|YP_005091657.1| riboflavin biosynthesis protein RibD [Oceanimonas sp. GK1]
gi|372984657|gb|AEY00907.1| riboflavin biosynthesis protein RibD [Oceanimonas sp. GK1]
Length = 371
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 143/231 (61%), Gaps = 18/231 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
KDD +M R +ELA + +TSPNP VGCV+VKDG +VGEGFH +AG PHAEVFALR+AG
Sbjct: 4 KDDARWMARALELARRGRFTTSPNPAVGCVVVKDGNLVGEGFHQRAGGPHAEVFALREAG 63
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
A+GATAYV+LEPC+H+GRTPPC + LI A V +VV M+DPNP V +GL LR+AGI
Sbjct: 64 AAAQGATAYVTLEPCSHHGRTPPCAQGLIDAGVTRVVAAMVDPNPRVAGRGLAMLREAGI 123
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
G+ E + +N F+HR+ TG+PF TL+ S++G GE +G + +
Sbjct: 124 QAEAGLMSEAAEAVNVGFLHRMRTGRPFVTLKLAASLDGRTALANGESQWITGPAARRDV 183
Query: 255 QEYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRII 287
Q + A +LS + T + +PAS E + QP RI+
Sbjct: 184 QRHRAQSCALLSGADTVLMDNAALNVRWAELPASLRHAYAEQELRQPLRIV 234
>gi|392374484|ref|YP_003206317.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino) uracil reductase
[Candidatus Methylomirabilis oxyfera]
gi|258592177|emb|CBE68486.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase [Candidatus Methylomirabilis oxyfera]
Length = 372
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 200/372 (53%), Gaps = 33/372 (8%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +MR + LA K G TSPNPMVG V+V+ G+IVGEG+H +AG+PHAEV AL AG
Sbjct: 5 DDERFMRHALVLAEKGRGRTSPNPMVGAVVVQHGRIVGEGYHAQAGKPHAEVVALEYAGG 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A A YV+LEPC HYGRTPPCT+ +I+A +++VVV +DPNP+V+ +G++ LRDAG+
Sbjct: 65 AARNADLYVTLEPCGHYGRTPPCTDRIIQAGIRRVVVPTIDPNPLVSGRGVQSLRDAGVI 124
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYS 251
V +G+ LNEAFI + PF L+ +S++G + + G+ SG +
Sbjct: 125 VDLGLRSADATALNEAFIKFMKHRTPFVVLKAAVSLDGKIATRTGDSRWVSGERSREHIH 184
Query: 252 QLLQEYDAIILSASSTKKYSIP-ASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKV 309
L + DA+I+ + ++ + ++ P+ + P R++ P L E++S+
Sbjct: 185 TLRDQIDAVIVGIGTVRRDNPRLTTRLPEGGRDPIRVVVDGLGPFPDDAQILQAEAASRT 244
Query: 310 IVFTDGEITVEPDMGTKGIETVNLH---------QLNLKAVLDYCYSHGFCSVLVDLRGN 360
V + P + +E L +++L+ +L SV+++ G
Sbjct: 245 WVAVAAD---APAKRIRALERRGLTVLEAGGFRGRVSLEHLLKRLGEREVTSVMIE--GG 299
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD------GGNPHTLLNSLGKRLILKNLQP 414
G + IE+ ++ K ++ V P+ G GG T ++++G+ L L L+
Sbjct: 300 EG----IFTSAIEEGIVDKFLLFVAPILLGGKTAPSLFGG---TGIDNIGQALRLARLRI 352
Query: 415 KMSSQSIVLEGY 426
+ + +++EGY
Sbjct: 353 EQLGEDVLIEGY 364
>gi|424736467|ref|ZP_18164926.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
ZB2]
gi|422949463|gb|EKU43837.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
ZB2]
Length = 371
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 169/292 (57%), Gaps = 12/292 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ ++LA A G+T+PNP+VG VIVK+G IVG G H KAG+PHAEV A R AGE
Sbjct: 6 DEKYMQLALDLAASAKGNTNPNPLVGAVIVKNGVIVGTGLHRKAGEPHAEVHAFRMAGEH 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+HYG+TPPC + ++ V +VVV M DPNP V +G++ L+DAGI V
Sbjct: 66 AMGATLYVTLEPCSHYGKTPPCANLVKESGVSRVVVAMQDPNPAVAGRGIQLLQDAGIVV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ---- 252
VGV ++ +RLNE FIH ++T +PF ++ ++++G + G +G +
Sbjct: 126 EVGVLEQQARRLNERFIHNMLTHRPFVISKFAMTLDGKIATHTGHSKWVTGEAAREDVHN 185
Query: 253 LLQEYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
+ E D I++ + + + ++ P RII S+ +P L+ E + +
Sbjct: 186 IRHEIDGILVGVGTVIADNPSLTTRLKQGYGKNPTRIIMDSSLRTPDNANVLNTEDAPTI 245
Query: 310 IVFTDGEITVEPDMGT-KGIETV----NLHQLNLKAVLDYCYSHGFCSVLVD 356
+V +D + + T KG+ + N + L + +L+ Y HG +L++
Sbjct: 246 LVCSDDVSQEKIHLFTEKGVTVLPVQKNEYGLQIDEMLEKLYMHGITDILLE 297
>gi|435853632|ref|YP_007314951.1| 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine
1'-reductase [Halobacteroides halobius DSM 5150]
gi|433670043|gb|AGB40858.1| 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine
1'-reductase [Halobacteroides halobius DSM 5150]
Length = 363
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 152/253 (60%), Gaps = 10/253 (3%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YM++ + LA +A G TSPNP+VG +IVK+G+I+G+G+H AG HAEV AL DA E
Sbjct: 2 NDQQYMKQALRLAKQAQGRTSPNPLVGAIIVKEGEIIGQGYHHYAGGAHAEVNALEDAKE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
G+T YV+LEPC HYG+TPPCTE +I+A +K+VV+ M DPNP V +G+ERLR AG++
Sbjct: 62 EVVGSTMYVTLEPCTHYGKTPPCTETIIEAGIKRVVIAMKDPNPKVAGQGVERLRRAGVE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYS 251
V VG+ K LNE FI I T +PF L+ ++++G + + G+ +G +
Sbjct: 122 VDVGLLAVEAKELNEIFIKYITTKRPFVILKNAVTLDGKIATKTGDSKWITGTKSREFVH 181
Query: 252 QLLQEYDAIILSA----SSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
+L + DAI++ S + + SQ P RII S + +ES +
Sbjct: 182 KLRDQVDAILVGIGTVLSDNPRLTTRLSQ--GGQDPIRIILDSKLRISSEAKVIKQESKA 239
Query: 308 KVIVFTDGEITVE 320
K IV T + ++E
Sbjct: 240 KTIVATTDQASLE 252
>gi|431800568|ref|YP_007227471.1| riboflavin biosynthesis protein RibD [Pseudomonas putida HB3267]
gi|430791333|gb|AGA71528.1| riboflavin biosynthesis protein RibD [Pseudomonas putida HB3267]
Length = 376
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGER 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSATS 202
>gi|299538422|ref|ZP_07051705.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
ZC1]
gi|298726009|gb|EFI66601.1| riboflavin biosynthesis protein ribD [Lysinibacillus fusiformis
ZC1]
Length = 370
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 169/292 (57%), Gaps = 12/292 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ ++LA A G+T+PNP+VG VIVK+G IVG G H KAG+PHAEV A R AGE
Sbjct: 5 DEKYMQLALDLAASAKGNTNPNPLVGAVIVKNGVIVGTGLHRKAGEPHAEVHAFRMAGEH 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+HYG+TPPC + ++ V +VVV M DPNP V +G++ L+DAGI V
Sbjct: 65 AMGATLYVTLEPCSHYGKTPPCANLVKESGVSRVVVAMQDPNPAVAGRGIQLLQDAGIVV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ---- 252
VGV ++ +RLNE FIH ++T +PF ++ ++++G + G +G +
Sbjct: 125 EVGVLEQQARRLNERFIHNMLTHRPFVISKFAMTLDGKIATHTGHSKWVTGEAAREDVHN 184
Query: 253 LLQEYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
+ E D I++ + + + ++ P RII S+ +P L+ E + +
Sbjct: 185 IRHEIDGILVGVGTVIADNPSLTTRLKQGYGKNPTRIIMDSSLRTPDNANVLNTEDAPTI 244
Query: 310 IVFTDGEITVEPDMGT-KGIETV----NLHQLNLKAVLDYCYSHGFCSVLVD 356
+V +D + + T KG+ + N + L + +L+ Y HG +L++
Sbjct: 245 LVCSDDVSQEKIHLFTEKGVTVLPVQKNEYGLQIDEMLEKLYMHGITDILLE 296
>gi|345430516|ref|YP_004823637.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Haemophilus parainfluenzae T3T1]
gi|301156580|emb|CBW16051.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Haemophilus parainfluenzae T3T1]
Length = 376
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 141/235 (60%), Gaps = 18/235 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M+ +ELA K +T+PNP VGCV+VK+G+IVG+GFH K GQPHAE AL DAGE
Sbjct: 8 DDVKFMQLALELAAKGQYTTTPNPSVGCVLVKNGEIVGKGFHFKTGQPHAERVALADAGE 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GATAYV+LEPC+HYGRTPPC LI+A V +VV M DPNP V KGL+ L DAGI
Sbjct: 68 KAKGATAYVTLEPCSHYGRTPPCALGLIEAGVSRVVAAMADPNPQVAGKGLKMLADAGIP 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V + +E + LN+ F+ R+ TGKP+ L+ +S++G GE E+ Q
Sbjct: 128 SAVNLLNEQAEALNKGFLKRMRTGKPYVQLKLAMSLDGRTAMASGESKWITGEAARADVQ 187
Query: 253 LLQEYDAIILSASSTKKYSIPA-----SQEPD----------ANQPFRIITVSNH 292
++ +LS S+T P+ +Q PD QP RII S +
Sbjct: 188 KMRAKATALLSTSATVLADDPSLNVRWNQFPDDLKAEYAEDTVRQPIRIILDSKN 242
>gi|255658129|ref|ZP_05403538.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM
20544]
gi|260849436|gb|EEX69443.1| riboflavin biosynthesis protein RibD [Mitsuokella multacida DSM
20544]
Length = 363
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 167/292 (57%), Gaps = 13/292 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MR +ELA A G TSPNPMVG VIV+ G+IV G+H KAG PHAE+ ALR AGEL
Sbjct: 3 DEEFMREALELARNAEGRTSPNPMVGAVIVQGGRIVAAGWHRKAGTPHAEIHALRMAGEL 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+HYGRT PC +A+++A +K+ V+ M DPNP+V +G++ L DAG++
Sbjct: 63 AKGATLYVTLEPCSHYGRTGPCAKAVVEAGIKRCVIAMKDPNPLVAGRGIKILEDAGVET 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV +E +RLNE F+ + PF L+ ++++G + + GE + + + E
Sbjct: 123 VCGVLEEEARRLNEVFLKWVPEKIPFVALKTAMTLDGKIATRTGESQWITNETSRRRVHE 182
Query: 257 ----YDAIILSASSTKKYSIPA--SQEPDAN--QPFRIITVSNHASPIRIPGLSEESSSK 308
YD I + T + P+ ++ PD P RII S +P+ + + +
Sbjct: 183 YRDRYDGIFVGI-GTVLHDDPSLTTRLPDGTGKNPVRIIVDSQARTPLTAKVVCDGQAKT 241
Query: 309 VIVFTDGEITVEPD-MGTKGIETVNLHQ---LNLKAVLDYCYSHGFCSVLVD 356
++ T+ + + G+E V + ++L+A++ CSV V+
Sbjct: 242 IVAVTEQAPAERCEALEAAGVEVVRAGKGAHVDLRALMQMLGQREICSVFVE 293
>gi|197283994|ref|YP_002149866.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Proteus mirabilis HI4320]
gi|194681481|emb|CAR40325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Proteus mirabilis HI4320]
Length = 385
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 143/243 (58%), Gaps = 19/243 (7%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N +D YMRR +ELA +TSPNP VGCVIVK+GKI+GEG+H AG PHAEV AL
Sbjct: 13 NEPANDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALN 72
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGE A+GAT YV+LEPC+H+G+TPPC +ALI A VK+VV M DPNP V +GL +L
Sbjct: 73 MAGENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVA 132
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
AGIDV+ GV + ++LN F R+ TG P+ L+ S++G GE +
Sbjct: 133 AGIDVSHGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASR 192
Query: 252 QLLQEYDA---IILSASSTKKYSIPA--------SQEPDA-------NQPFRIITVS-NH 292
Q +Q + A IL+ S+T PA S E A QP RIIT S N
Sbjct: 193 QDVQNFRAQASAILTTSATVLADDPAMNVRWEALSDEIKAIYPLESLRQPIRIITDSQNR 252
Query: 293 ASP 295
+P
Sbjct: 253 VTP 255
>gi|302875673|ref|YP_003844306.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans
743B]
gi|307688111|ref|ZP_07630557.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans
743B]
gi|302578530|gb|ADL52542.1| riboflavin biosynthesis protein RibD [Clostridium cellulovorans
743B]
Length = 364
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 200/366 (54%), Gaps = 26/366 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL---RDAGEL 136
YMRR +ELA G SPNPMVG VIVK+G+I+GEG+H + G PHAEV A+ D GEL
Sbjct: 5 YMRRALELAKLGAGRVSPNPMVGAVIVKNGEIIGEGYHKQYGGPHAEVNAIASVSDNGEL 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EG+T YV+LEPC HYG+TPPCT+A+I K+K VV+G LDPNP+V KG+E LR GI+V
Sbjct: 65 -EGSTIYVTLEPCCHYGKTPPCTKAIIDNKIKTVVIGTLDPNPLVAGKGVEILRAEGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
VGV +E C ++NE+F+ I T PF ++ ++++G + G+ ES +
Sbjct: 124 IVGVLEEECLKINESFMKYIKTKTPFVIMKAAMTLDGKIATSTGDSKWITNEESRINVHK 183
Query: 253 LLQEYDAIILSASSTKKY--SIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L + I++ ++ K + E A+ P RII S P+ L+ + +VI
Sbjct: 184 LRNKVSGIMVGINTVLKDDPELTCRLEGGAS-PKRIIVDSGLKIPLNAKVLNAKDKVEVI 242
Query: 311 VFT-----DGEITVEPDMGTKGIETVNLHQ-LNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
V T + ++ V G K I Q +NLK +++ + SVL++ G
Sbjct: 243 VATTRKADESKVEVLERQGVKVIIVPEKEQKVNLKKLMEELGNLKVDSVLLEGGGT---- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSI 421
L +E+ ++ K+ + P + G + P +N + + +K+L+ I
Sbjct: 299 --LCFSALEEGIIDKVQFYIAPKIIGGENSKTPVEGVGINKIKDAINVKDLRVSTFGGDI 356
Query: 422 VLEGYL 427
++EGY+
Sbjct: 357 LIEGYI 362
>gi|330505155|ref|YP_004382024.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
mendocina NK-01]
gi|328919441|gb|AEB60272.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
mendocina NK-01]
Length = 371
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R + LA K + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 5 DQLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V GL RL +AGI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGNGLLRLMNAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ TG PF ++ +S++G GE +G Q
Sbjct: 125 RSGVLESEARALNAGFIKRMETGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRAQSSVVLSGADT 198
>gi|381405465|ref|ZP_09930149.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea sp. Sc1]
gi|380738664|gb|EIB99727.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea sp. Sc1]
Length = 366
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 2 DERYMARALELARRGRFTTMPNPNVGCVIVRDGEVVGEGWHQRAGEPHAEVHALRMAGEK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A VK+VV M DPNP V +GL RL+ AGI+V
Sbjct: 62 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVKRVVAAMQDPNPQVAGRGLHRLQQAGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 122 SHGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQR 181
Query: 254 LQEYDAIILSASST 267
L+ A ILS+S+T
Sbjct: 182 LRAQSAAILSSSAT 195
>gi|145630038|ref|ZP_01785820.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021]
gi|144984319|gb|EDJ91742.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021]
Length = 372
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DHVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERIALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+G TAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGTTAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G + GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMESGESKWITGSDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATIIADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|229128665|ref|ZP_04257643.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4]
gi|228654858|gb|EEL10718.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-Cer4]
Length = 348
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 178/312 (57%), Gaps = 33/312 (10%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE GAT YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVRGATIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + D E+ Q+ E AI++ A++ +
Sbjct: 123 NKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPGLSEESSSKVIVFTD 314
K + P+ ++ P+ P RII V++ +P I S ++ K I +
Sbjct: 183 KDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFTTSNHAAKKKIALEN 241
Query: 315 GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQ 374
+ V T G + +NLH++ LD G S+LV+ G IE
Sbjct: 242 AGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLVEGGGEVN------ASFIEN 287
Query: 375 NLLQKIVVEVLP 386
L+ K+++ V P
Sbjct: 288 KLMDKLILYVAP 299
>gi|326201832|ref|ZP_08191702.1| riboflavin biosynthesis protein RibD [Clostridium papyrosolvens DSM
2782]
gi|325987627|gb|EGD48453.1| riboflavin biosynthesis protein RibD [Clostridium papyrosolvens DSM
2782]
Length = 367
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 199/365 (54%), Gaps = 22/365 (6%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
FYM+R E++ G T+PNP+VG VIVKDG+I+ EGFH G HAEV A ++A
Sbjct: 6 FYMKRAFEISKGGWGRTNPNPLVGAVIVKDGEIISEGFHEALGGAHAEVCAFQNATSDIS 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GAT YV+LEPC+HYGRTPPC +A+ ++ +K+VVV M+DPNP V+ KG++ L+DA I+V V
Sbjct: 66 GATIYVNLEPCSHYGRTPPCAKAIAESGIKEVVVAMVDPNPKVSGKGIQILKDANINVIV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GVAESGGYYSQLL 254
GV +E +RLNE FIH I PF ++ ++++G + G+ S Y ++
Sbjct: 126 GVLEEEARRLNEIFIHYITKQLPFVIMKTAMTLDGKIASVTGDSRWISSEPSREYVHKIR 185
Query: 255 QEYDAIILSASSTKKYSIPASQEP---DANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
+I++ ++ K + + P D P RI+ S P+ ++ +S++ +I+
Sbjct: 186 NRVSSIMVGVNTIIKDNPSLTARPSSGDGIDPVRIVVDSRGRIPMDSRVINGDSNAGLIL 245
Query: 312 FTDGEITVEPDM-----GTKGIETVNLH-QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
T I + + G + I+T+ ++NL ++ Y SVL++ GN
Sbjct: 246 ATTDRINKDKETQLLSRGVRIIKTIEKSGKVNLGELMRELYKLEIDSVLLEGGGN----- 300
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQSIV 422
L +E ++ K++ V P + GS P + + + L +++ + + ++
Sbjct: 301 -LNFSALEAGIVNKVMTFVSPKIIGGSSAVTPVGGEGIEEMKDAIALSDIRVEGFDRDVL 359
Query: 423 LEGYL 427
+EGY+
Sbjct: 360 IEGYI 364
>gi|422016452|ref|ZP_16363035.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia burhodogranariea DSM 19968]
gi|414092651|gb|EKT54324.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia burhodogranariea DSM 19968]
Length = 371
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 140/236 (59%), Gaps = 19/236 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R +ELA +TSPNP VGCVIV+DG+IVGEG+H KAG+PHAEV ALR AG
Sbjct: 3 EQDRIYMSRALELAQIGCFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL L AGI
Sbjct: 63 EKATGATAYVTLEPCSHHGRTPPCAEALINAGVSRVVAAMQDPNPEVAGRGLYMLSKAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ GV + + LN F+ R+ T P+ L+ S++G + GE + +
Sbjct: 123 ETETGVLMDQAEALNRGFLKRMRTAFPYIQLKLAASLDGKTALESGESKWITSAAARRDV 182
Query: 252 QLLQEYDAIILSASSTKKYSIPA-----SQEPD----------ANQPFRIITVSNH 292
Q+L+ + ILS SST P+ S+ PD QP RI+ + NH
Sbjct: 183 QVLRAQASAILSTSSTVLVDNPSLTVRWSELPDDVQAIYPEETLRQPIRIV-LDNH 237
>gi|422659609|ref|ZP_16722033.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331018226|gb|EGH98282.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 378
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA K + ST PNP VGCVIV+DG+IVG+G+H +AG+PHAEV ALR+AGEL
Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI A + +VV M DPNP V GL RL AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ FI R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLEGEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|425066887|ref|ZP_18470003.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW6]
gi|404601558|gb|EKB01950.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW6]
Length = 385
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 143/243 (58%), Gaps = 19/243 (7%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N +D YMRR +ELA +TSPNP VGCVIVK+GKI+GEG+H AG PHAEV AL
Sbjct: 13 NEPANDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALN 72
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGE A+GAT YV+LEPC+H+G+TPPC +ALI A VK+VV M DPNP V +GL +L
Sbjct: 73 MAGENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVA 132
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
AGIDV+ GV + ++LN F R+ TG P+ L+ S++G GE +
Sbjct: 133 AGIDVSHGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASR 192
Query: 252 QLLQEYDA---IILSASSTKKYSIPA--------SQEPDA-------NQPFRIITVS-NH 292
Q +Q + A IL+ S+T PA S E A QP RIIT S N
Sbjct: 193 QDVQNFRAQASAILTTSATVLADDPAMNVRWEALSDEIKAIYPLESLRQPIRIITDSQNR 252
Query: 293 ASP 295
+P
Sbjct: 253 VTP 255
>gi|145634121|ref|ZP_01789832.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
PittAA]
gi|145268565|gb|EDK08558.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
PittAA]
Length = 372
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LATK +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DHVFMQRALDLATKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+G TAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGTTAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + + +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLSDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGSDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATIIADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|218781151|ref|YP_002432469.1| riboflavin biosynthesis protein RibD [Desulfatibacillum
alkenivorans AK-01]
gi|218762535|gb|ACL05001.1| riboflavin biosynthesis protein RibD [Desulfatibacillum
alkenivorans AK-01]
Length = 372
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/245 (40%), Positives = 151/245 (61%), Gaps = 8/245 (3%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D YMR+ + LA K G+TSPNPMVG VIVKDGK++G+G+H KAG PHAE+FAL +AG
Sbjct: 3 KQDTQYMRQALALAEKGTGNTSPNPMVGAVIVKDGKVIGQGWHKKAGGPHAEIFALEEAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
A+GAT YV+LEPCNH+G+TPPC+ A++KA + KV+ + DPNP GL+ L++ G+
Sbjct: 63 ADAKGATMYVTLEPCNHHGKTPPCSHAVLKAGIAKVIAAIKDPNPKAQG-GLKYLQENGV 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+ GV + ++ NE FI + TG+PF + +++G + ++G+ ES Y
Sbjct: 122 ETQWGVCEAEARKQNEFFIKHVTTGRPFVVCKCAATLDGRIATRIGDSKWITGEESRAYV 181
Query: 251 SQLLQEYDAIILSASSTK--KYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
++ DAI++ ++ + S+ A ++ N P R+I S + L ++S S
Sbjct: 182 HKMRHAMDAILVGINTVRMDDPSLTARLEDGQGNDPLRVILDSRLSMDPSAKMLRQDSDS 241
Query: 308 KVIVF 312
++F
Sbjct: 242 GTLIF 246
>gi|89073130|ref|ZP_01159669.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
sp. SKA34]
gi|89051083|gb|EAR56540.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
sp. SKA34]
Length = 374
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 143/238 (60%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI +I+GEGFH +AG+PHAEVFAL+ AG
Sbjct: 6 DTRLMLRAIQLAKRGCFTTAPNPNVGCVIAIGDEILGEGFHYRAGEPHAEVFALKQAGTR 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC EALIK+ + +V+ M+DPNP+V +G+E L+ AG+DV
Sbjct: 66 AKGATAYVTLEPCSHYGRTPPCAEALIKSGISRVICAMVDPNPLVAGRGVEMLQKAGVDV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + +N+AFI ++ T P+ L+ S++G GE +G Y +Q
Sbjct: 126 QVGLLKEEAQAINKAFIKQMTTKMPYVELKLASSLDGKTALANGESKWITGPYARADVQR 185
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVS-NHASP 295
+ A ILS S+T P+ + D QP R+I S N +P
Sbjct: 186 HRAQAGAILSTSATVIADDPSLNVRWSELGTLIQDEYAQADVRQPIRVIIDSQNRLTP 243
>gi|28867918|ref|NP_790537.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato str. DC3000]
gi|28851154|gb|AAO54232.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 381
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA K + ST PNP VGCVIV+DG+IVG+G+H +AG+PHAEV ALR+AGEL
Sbjct: 12 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREAGEL 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI A + +VV M DPNP V GL RL AGI V
Sbjct: 72 ARGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ FI R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 132 QCGVLEGEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 191
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 192 LRAQSSVVLTGADT 205
>gi|253687420|ref|YP_003016610.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753998|gb|ACT12074.1| riboflavin biosynthesis protein RibD [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 378
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 154/284 (54%), Gaps = 33/284 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 13 DELYMARALELARRGRFTTAPNPNVGCVIVRDGDIVGEGYHFRAGEPHAEVHALRMAGER 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 73 ARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGRGLHRLQQAGIAV 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 133 SHGFMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 192
Query: 257 Y---DAIILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNHASPIRI 298
+ A ILS+S+T P+ E D QP R+I S R+
Sbjct: 193 FRAESAAILSSSATVLADDPSLTVRWSELGADVQTRYSEADLRQPVRVIVDSQR----RV 248
Query: 299 PGLSEESSSKVIVFTDGE-----ITVEPDMGTKGIETVNLHQLN 337
+ IV GE + + +G+E V L Q N
Sbjct: 249 ------TPQHRIVSQPGETWLARVQADEQAWPQGVEQVTLPQHN 286
>gi|354598786|ref|ZP_09016803.1| riboflavin biosynthesis protein RibD [Brenneria sp. EniD312]
gi|353676721|gb|EHD22754.1| riboflavin biosynthesis protein RibD [Brenneria sp. EniD312]
Length = 383
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 140/229 (61%), Gaps = 18/229 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 13 DETYMARALELARRGRFTTAPNPNVGCVIVRDGEVVGEGYHFRAGEPHAEVHALRMAGER 72
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL A V +VVV M DPNP V +GL RL+ AGI V
Sbjct: 73 ARGATAYVTLEPCSHHGRTPPCADALAAAGVSRVVVAMQDPNPQVAGRGLHRLQQAGIAV 132
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 133 SHGLMTAEAEKLNRGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSAQARQDVQR 192
Query: 257 Y---DAIILSASSTKKYSIPA----SQEPDAN-----------QPFRII 287
+ A ILS+ +T P+ +E DA+ QP R+I
Sbjct: 193 FRAQSAAILSSGATVLADDPSLTVRWRELDADTQRNYAAADVRQPVRVI 241
>gi|409398019|ref|ZP_11248871.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. Chol1]
gi|409117525|gb|EKM93953.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. Chol1]
Length = 367
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGER 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL+ LR AGI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGRGLQLLRSAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G PF + +S++G GE +G Q
Sbjct: 125 ASGVLEAEARELNCGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 185 LRAGSSVVLTGADT 198
>gi|422804485|ref|ZP_16852917.1| riboflavin biosynthesis protein RibD [Escherichia fergusonii B253]
gi|324114633|gb|EGC08601.1| riboflavin biosynthesis protein RibD [Escherichia fergusonii B253]
Length = 367
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV+ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVYALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|227358137|ref|ZP_03842478.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Proteus mirabilis ATCC 29906]
gi|227161473|gb|EEI46510.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Proteus mirabilis ATCC 29906]
Length = 385
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 143/243 (58%), Gaps = 19/243 (7%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N +D YMRR +ELA +TSPNP VGCVIVK+GKI+GEG+H AG PHAEV AL
Sbjct: 13 NEPANDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALN 72
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGE A+GAT YV+LEPC+H+G+TPPC +ALI A VK+VV M DPNP V +GL +L
Sbjct: 73 MAGENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVA 132
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
AGIDV+ GV + ++LN F R+ TG P+ L+ S++G GE +
Sbjct: 133 AGIDVSHGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASR 192
Query: 252 QLLQEYDA---IILSASSTKKYSIPA--------SQEPDA-------NQPFRIITVS-NH 292
Q +Q + A IL+ S+T PA S E A QP RIIT S N
Sbjct: 193 QDVQNFRAQASAILTTSATVLADDPAMNVRWEVLSDEIKAIYPLESLRQPIRIITDSQNR 252
Query: 293 ASP 295
+P
Sbjct: 253 VTP 255
>gi|209694491|ref|YP_002262419.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis
protein RibD) [Aliivibrio salmonicida LFI1238]
gi|208008442|emb|CAQ78607.1| pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis
protein RibD) [Aliivibrio salmonicida LFI1238]
Length = 373
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 142/236 (60%), Gaps = 22/236 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M+R ++LA + + +T+PNP VGCV+VK+G IVGEG H KAG+PHAEV ALR A E
Sbjct: 7 DHLMMQRAIQLAKRGIYTTAPNPNVGCVLVKNGLIVGEGAHLKAGEPHAEVHALRQASEN 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M+DPNP V +GL L AGI+
Sbjct: 67 AKGATAYVTLEPCSHYGRTPPCAEGLIKAGVVKVICAMVDPNPQVAGRGLAMLEAAGIET 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLL 254
G+ + + LN +F+ R+ TGKPF L+ S++G L GV++ + Q +
Sbjct: 127 ASGLLETESRALNPSFLTRMETGKPFVQLKMAASLDGKT--ALKNGVSQWITSKEARQDV 184
Query: 255 QEYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
Q Y A +ILS + T + +P S E + QP R+I H
Sbjct: 185 QRYRAQAGVILSTAKTVIEDNASLNVRWSDLPNSIQESYLEAEVRQPLRVILDRQH 240
>gi|418292847|ref|ZP_12904777.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379064260|gb|EHY77003.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 366
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC EAL+KA V +VV M DPNP V GL+ LR AGI+V
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGNGLKLLRSAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G P+ + +S++G GE +G Q
Sbjct: 124 ASGVLEGEARELNAGFIKRMESGLPYVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 183
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 184 LRARSSVVLTGADT 197
>gi|330445267|ref|ZP_08308919.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489458|dbj|GAA03416.1| riboflavin biosynthesis protein RibD [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 374
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 143/239 (59%), Gaps = 21/239 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + +T+PNP VGCVI + +IVGEGFH +AG+PHAEVFAL+ AG L
Sbjct: 6 DTRLMLRAIQLAKRGRFTTAPNPNVGCVIARGEEIVGEGFHYRAGEPHAEVFALKQAGTL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC EALIK+ + KV+ M+DPNP+V +G+E L+ AGIDV
Sbjct: 66 AKGATAYVTLEPCSHYGRTPPCAEALIKSGISKVICAMVDPNPMVAGRGVEMLQKAGIDV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +E + LN FI + PF L+ S++G GE +G +Q
Sbjct: 126 QVGLLEEEAQALNLGFIKSMTKKMPFVELKLASSLDGKTALANGESKWITGPCARADVQR 185
Query: 257 YDA---IILSASSTKKYSIPA----------------SQEPDANQPFRIITVS-NHASP 295
+ A ILS S+T P+ +QE D QP R+I S N +P
Sbjct: 186 HRARAGAILSTSATVIADDPSLNVRWSELGEQVQAQYAQE-DVRQPIRVIIDSQNRLTP 243
>gi|421503874|ref|ZP_15950819.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas mendocina DLHK]
gi|400345378|gb|EJO93743.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas mendocina DLHK]
Length = 371
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R + LA K + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DHLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQAGER 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL +AGI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRGLLRLANAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G PF ++ +S++G GE +G Q
Sbjct: 125 LSGVLEAEARALNVGFIKRMESGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRAQSSVVLSGADT 198
>gi|170719753|ref|YP_001747441.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619]
gi|169757756|gb|ACA71072.1| riboflavin biosynthesis protein RibD [Pseudomonas putida W619]
Length = 376
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 9 DAHYMARALELARKGIYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGER 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL++A V +VV M DPNP V +GL RL +AGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVQAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF + +S++G GE +G +Q
Sbjct: 129 ASGVLEAQARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 257 YDA---IILSASST 267
A ++L+++++
Sbjct: 189 LRASASVVLTSAAS 202
>gi|425073680|ref|ZP_18476786.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW4]
gi|404594951|gb|EKA95506.1| riboflavin biosynthesis protein RibD [Proteus mirabilis WGLW4]
Length = 385
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 143/243 (58%), Gaps = 19/243 (7%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N +D YMRR +ELA +TSPNP VGCVIVK+GKI+GEG+H AG PHAEV AL
Sbjct: 13 NEPANDETYMRRAIELAALGRFTTSPNPNVGCVIVKEGKIIGEGYHHHAGGPHAEVNALN 72
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGE A+GAT YV+LEPC+H+G+TPPC +ALI A VK+VV M DPNP V +GL +L
Sbjct: 73 MAGENAKGATVYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLVA 132
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
AGIDV+ GV + ++LN F R+ TG P+ L+ S++G GE +
Sbjct: 133 AGIDVSHGVLMQEAEKLNIGFFKRMRTGFPYIQLKLAASLDGKTALASGESQWITSNASR 192
Query: 252 QLLQEYDA---IILSASSTKKYSIPA--------SQEPDA-------NQPFRIITVS-NH 292
Q +Q + A IL+ S+T PA S E A QP RIIT S N
Sbjct: 193 QDVQNFRAQASAILTTSATVLADDPAMNVRWEALSDEIKAIYPLESLRQPIRIITDSQNR 252
Query: 293 ASP 295
+P
Sbjct: 253 VTP 255
>gi|330812014|ref|YP_004356476.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327380122|gb|AEA71472.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase; riboflavin
biosynthesis protein RibD [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 377
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHYMARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LNE F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNEGFLKRMEQGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|146308871|ref|YP_001189336.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas mendocina ymp]
gi|145577072|gb|ABP86604.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
mendocina ymp]
Length = 371
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R + LA K + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DHLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQAGER 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL +AGI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCADALVAAGVGRVVAAMQDPNPQVAGRGLLRLANAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G PF ++ +S++G GE +G Q
Sbjct: 125 LSGVLEAEARALNVGFIKRMESGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRAQSSVVLSGADT 198
>gi|417958586|ref|ZP_12601500.1| riboflavin biosynthesis protein RibD [Neisseria weaveri ATCC 51223]
gi|343966800|gb|EGV35053.1| riboflavin biosynthesis protein RibD [Neisseria weaveri ATCC 51223]
Length = 369
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 174/346 (50%), Gaps = 24/346 (6%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D++D M + LA + STSPNP VGCVI + +IVG+GFH +AG PHAEV ALR A
Sbjct: 3 DRNDILMMENALSLARQGRFSTSPNPRVGCVIARGSQIVGQGFHIQAGGPHAEVHALRQA 62
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
G LAEGATAYV+LEPC+HYGRTPPC EAL+ + VK+VV M DPNP+V+ KGL L AG
Sbjct: 63 GGLAEGATAYVTLEPCSHYGRTPPCAEALVHSGVKRVVAAMTDPNPLVSGKGLAMLEAAG 122
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL--DQLGEGV-AESGGYY 250
I G+ ++ + LN F+ RI +PF L+ S++G D L + + E
Sbjct: 123 IQTESGLLEQQARELNRGFLSRIERNRPFVRLKCAASMDGKTALSDGLSQWITGEEARLD 182
Query: 251 SQLLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
Q L+ +++ T P P QP RII S +P + + +S
Sbjct: 183 VQTLRAESCAVITGIGTVLADNPKLNVRAFPTLRQPARIIVDSRLRTPEHCHLIQDNTSP 242
Query: 308 KVIVFT---DGEITVEPDMGTKGIETVNLH--QLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
+I +G + I N H Q++L +L GF V+V+
Sbjct: 243 TIIATANPEEGRLKKFARYNHVDIIQTNAHNGQVDLSDLLRLLAERGFGEVMVEAGAG-- 300
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG-------GNPHTLLN 401
L + Q+L +IV+ P G++ NP TLL
Sbjct: 301 ----LAGAFLYQDLADEIVLYQAPKILGNNARGLFALPENPQTLLQ 342
>gi|167031576|ref|YP_001666807.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1]
gi|166858064|gb|ABY96471.1| riboflavin biosynthesis protein RibD [Pseudomonas putida GB-1]
Length = 376
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGER 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL+RL +AGI+V
Sbjct: 69 AIGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLQRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G PF + +S++G GE +G Q
Sbjct: 129 ASGVLETEARALNPGFLKRMEHGLPFVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSAAS 202
>gi|429219982|ref|YP_007181626.1| riboflavin biosynthesis protein RibD [Deinococcus peraridilitoris
DSM 19664]
gi|429130845|gb|AFZ67860.1| riboflavin biosynthesis protein RibD [Deinococcus peraridilitoris
DSM 19664]
Length = 358
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
MR + A + +G TSPNP VGCV+V++G+IVG GFHPKAG+PHAEVFALR+A E A GA
Sbjct: 1 MRAALGQAARGLGRTSPNPSVGCVVVREGEIVGRGFHPKAGEPHAEVFALREAAERARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V++VVV LDPNP V +G+ +LR+A I+V+VGV
Sbjct: 61 TAYVTLEPCSHFGRTPPCADALIAAGVRRVVVAALDPNPRVAGRGVRKLREADIEVSVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ----E 256
+ R F I +P+ L+Y ++++G + + G+ S L+ E
Sbjct: 121 LQDEAARQQAGFRSLITRARPWTVLKYAMTLDGTIATRSGDSRWVSSEEARTLVHRWRDE 180
Query: 257 YDAIILSASS 266
DA+ + A +
Sbjct: 181 LDAVAVGAQT 190
>gi|293408560|ref|ZP_06652399.1| riboflavin biosynthesis protein RibD [Escherichia coli B354]
gi|432541789|ref|ZP_19778650.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE236]
gi|432547133|ref|ZP_19783930.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE237]
gi|432620516|ref|ZP_19856562.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE76]
gi|432791662|ref|ZP_20025756.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE78]
gi|432797629|ref|ZP_20031657.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE79]
gi|432813909|ref|ZP_20047720.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE115]
gi|291471738|gb|EFF14221.1| riboflavin biosynthesis protein RibD [Escherichia coli B354]
gi|431078306|gb|ELD85364.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE236]
gi|431085306|gb|ELD91419.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE237]
gi|431162875|gb|ELE63315.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE76]
gi|431342458|gb|ELG29437.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE78]
gi|431345849|gb|ELG32763.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE79]
gi|431368928|gb|ELG55159.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE115]
Length = 367
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G + GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMESGESQWITSPQARLDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|386828978|ref|ZP_10116085.1| riboflavin biosynthesis protein RibD [Beggiatoa alba B18LD]
gi|386429862|gb|EIJ43690.1| riboflavin biosynthesis protein RibD [Beggiatoa alba B18LD]
Length = 373
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 187/343 (54%), Gaps = 42/343 (12%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R + LA + + ST PNP VGCVIV+DG+IVGEG+H AG+PHAE++AL+ A E
Sbjct: 5 DQYYMARALHLAERGLWSTDPNPRVGCVIVRDGEIVGEGWHEVAGEPHAEIYALQMAKEK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC H+GRTPPCT+ALIKA + +VV DPNPIV SKG+E+L AGI V
Sbjct: 65 AQGATCYVTLEPCCHHGRTPPCTDALIKAGITRVVAASTDPNPIVASKGIEQLNKAGIVV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
VGV ++LN F R+ +P+ + +S++G GE ++ Q
Sbjct: 125 NVGVLGAQAEQLNAGFFMRMRRNRPYIRCKLAMSLDGRTAMASGESQWITSQDARRDVQG 184
Query: 254 LQEYDAIILSASST-----KKYSIPASQEPD-------ANQPFRIITVSNHASPIRIPGL 301
L+ + +++ + T + S+ S+ P QP R I V H S + P
Sbjct: 185 LRARSSAVMTGAGTILADNPRLSVRESELPQHLYKPKIIRQPIRAI-VDAHLSCMP-PAH 242
Query: 302 SEESSSKVIVFTDGE-ITVEPDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLV 355
+ SS+ IVFT T++ + G ++L + ++L+ + CY
Sbjct: 243 IFDKSSQTIVFTASRNETIKAMLTEAGAHVLSLPRGTTGDIDLQ---EMCYR-------- 291
Query: 356 DLRGNYGDLEMLLKEG-------IEQNLLQKIVVEVLPVWNGS 391
L +Y E+LL+ G ++ L+ +IV+ + PV G+
Sbjct: 292 -LATDYHVNELLLETGATLSGSMLKAGLIDEIVIYMAPVLMGN 333
>gi|398999026|ref|ZP_10701779.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM18]
gi|398132645|gb|EJM21907.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM18]
Length = 377
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHVRAGEPHAEVHALRAAGDK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+KA V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVKAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LNE F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGTAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|423699577|ref|ZP_17674067.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q8r1-96]
gi|387997007|gb|EIK58337.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q8r1-96]
Length = 377
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHYMARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LNE F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNEGFLKRMEQGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|417844565|ref|ZP_12490606.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M21639]
gi|341956524|gb|EGT82945.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M21639]
Length = 372
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+GK+VGEGFH KAGQPHAE AL AGE
Sbjct: 8 DRKFMQRALDLAAKGQYTTTPNPSVGCVLVKNGKMVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVIKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDRAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVLADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|331661791|ref|ZP_08362714.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143]
gi|432769214|ref|ZP_20003587.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE50]
gi|432959797|ref|ZP_20150083.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE202]
gi|433061630|ref|ZP_20248596.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE125]
gi|331060213|gb|EGI32177.1| riboflavin biosynthesis protein RibD [Escherichia coli TA143]
gi|431319254|gb|ELG06938.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE50]
gi|431478692|gb|ELH58437.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE202]
gi|431588334|gb|ELI59619.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE125]
Length = 367
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G + GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMESGESQWITSPQARLDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|432453259|ref|ZP_19695499.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE193]
gi|433031849|ref|ZP_20219664.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE112]
gi|430974601|gb|ELC91524.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE193]
gi|431560156|gb|ELI33677.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE112]
Length = 367
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 145/239 (60%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 241
>gi|349575170|ref|ZP_08887091.1| riboflavin biosynthesis protein RibD [Neisseria shayeganii 871]
gi|348013178|gb|EGY52101.1| riboflavin biosynthesis protein RibD [Neisseria shayeganii 871]
Length = 370
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 155/293 (52%), Gaps = 8/293 (2%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N D +MR + LA + STSPNP VGCVI G+I+G+GFH +AG+PHAEV ALR
Sbjct: 5 NFSPQDHAHMRHALALAEQGRFSTSPNPRVGCVIALGGQIIGQGFHLRAGEPHAEVHALR 64
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AG A GATAYV+LEPC H+GRTPPC ALI+A V +VV M DPNP+V KGL LR+
Sbjct: 65 QAGSAARGATAYVTLEPCAHHGRTPPCAAALIQAGVARVVAAMRDPNPLVAGKGLAMLRE 124
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
AGI V G+ + + LN F+ RI G+PF L+ S++G G +G
Sbjct: 125 AGIQVACGLYEAEARELNRGFLSRIERGRPFVKLKTAASLDGKTALADGRSQWITGPAAR 184
Query: 252 QLLQEYDA---IILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
Q +Q A +L+ T P P QP RI+ S +P+ + +
Sbjct: 185 QNVQTLRAESCAVLTGVGTVLADNPRLNVRSFPTLRQPLRIVLDSRLRTPVHSHLIQDGQ 244
Query: 306 SSKVIVFT--DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
++ ++ DG P + + T + +L A+L Y G ++++
Sbjct: 245 ATLILTAAEDDGRFAAFPAVRLHRLPTDADVRPSLPALLAYLAEQGIGELMLE 297
>gi|220931696|ref|YP_002508604.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5- phosphoribosylamino)uracil
reductase [Halothermothrix orenii H 168]
gi|219993006|gb|ACL69609.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase;5-amino-6-(5-phosphoribosylamino)uracil
reductase [Halothermothrix orenii H 168]
Length = 371
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 200/368 (54%), Gaps = 28/368 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM++ +ELA K G T+PNP+VG +IV++G+IVG+GFH G PHAE+ AL +AGE A G
Sbjct: 12 YMQKVLELARKGEGYTAPNPLVGAIIVREGEIVGQGFHQYYGGPHAEILALEEAGERARG 71
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC HYG+TPPCT+ +I + VK+V+ M DPNP+V KG++ L++ GI+V VG
Sbjct: 72 ATLYVNLEPCCHYGKTPPCTKKIIDSGVKRVLAAMFDPNPLVAGKGVKELQENGIEVEVG 131
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA---ESGGYYSQLLQ- 255
+ + +RLNE +I I + +PF L+ L+++G + G+ E ++ L+
Sbjct: 132 LLRKEAERLNEVYIRYISSDRPFVYLKSALTLDGFIATVTGDSRWISNEKARLFAHTLRH 191
Query: 256 EYDAIILSASST-KKYSIPASQEPD--ANQPFRIITVSNHASPIRIPGLSEESSSKVIVF 312
+ DA+++ + K S ++ PD RII + P ++++S + I+
Sbjct: 192 KVDAVLVGIGTILKDDSALTTRLPDGRGEDSIRIILDPELSIPPDARVINQKSRKRTILV 251
Query: 313 TDGEITVEPDMGTKGIETVNLH--QLN------LKAVLDYCYSHGFCSVLVDLRG--NYG 362
+ + G E + + QLN LKA+L + G S+LV+ G NY
Sbjct: 252 CGEDYDNKKYQGLLRKENLEILSVQLNEEGKIPLKALLRILHKQGISSILVEGGGRVNYS 311
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGG---NPHTLLNSLGKRLILKNLQPKMSSQ 419
LKEG L+ K+ + P+ G D G + + K L+++Q
Sbjct: 312 ----FLKEG----LVDKVYFFIAPIILGGDDGIRVFSGEGVADIEKAWKLRDVQYNFFDD 363
Query: 420 SIVLEGYL 427
+I++ YL
Sbjct: 364 NILISAYL 371
>gi|77461240|ref|YP_350747.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
fluorescens Pf0-1]
gi|77385243|gb|ABA76756.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
fluorescens Pf0-1]
Length = 376
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 10 DAHFMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHERAGEPHAEVHALRAAGER 69
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A + +VV M DPNP V +GL+RL DAGI
Sbjct: 70 ARGATAYVTLEPCSHHGRTPPCADALVNAGIGRVVAAMRDPNPQVAGRGLQRLTDAGIAT 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 130 ESGVLEAEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 189
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 190 LRAQASVVLTGADT 203
>gi|422651849|ref|ZP_16714640.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964923|gb|EGH65183.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 378
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA K + ST PNP VGCVIV+DG+IVG+G+H +AG+PHAEV ALR+AGEL
Sbjct: 9 DVHYMAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI A + +VV M DPNP V GL RL AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALISAGLGRVVAAMQDPNPQVAGSGLLRLMTAGISV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ FI R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLEGEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|317969093|ref|ZP_07970483.1| riboflavin biosynthesis protein ribD
(diaminohydroxyphosphoribosylaminopyrimidine deaminase /
[Synechococcus sp. CB0205]
Length = 371
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 166/285 (58%), Gaps = 9/285 (3%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
+M+R ++LA G TSPNP+VGCV++ + G +VGEGFH +AG PHAEV AL AGE A+
Sbjct: 20 WMQRALQLAALGAGRTSPNPLVGCVVLDRQGALVGEGFHRRAGTPHAEVHALSQAGERAQ 79
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G TA VSLEPC H+GRTPPC+EALI A V++VVV M DP+P V G+ +L+ AGI+V
Sbjct: 80 GGTAIVSLEPCCHHGRTPPCSEALIAAGVRRVVVAMRDPDPRVAGGGIAQLQAAGIEVIS 139
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLL 254
GV + + LN +FI R+ TG+P+ L++ +S++G G SG + QL
Sbjct: 140 GVCEAEAQALNRSFIQRVQTGRPWGILKWAMSLDGRTALPNGASQWISGPPARAWVHQLR 199
Query: 255 QEYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
+ DA+++ + + + + S+ + +P R++ + P + L ++S ++ +V
Sbjct: 200 AQCDAVLVGGGTVRADNPLLTSRGQRSPEPLRVVLSRSLDLP-QDTQLWDQSLAQTLVLH 258
Query: 314 DGEITVE--PDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
+ E + G+E + L + +A L+ G VL +
Sbjct: 259 GSKAPAERQQQLDRLGVEHLALPECQPRAALELLAQRGCNQVLWE 303
>gi|254507822|ref|ZP_05119952.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16]
gi|219549195|gb|EED26190.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus 16]
Length = 368
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 137/229 (59%), Gaps = 18/229 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + +T+PNP VGCVI ++G IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 8 DFNMMSRAIWLAKGGIYTTAPNPNVGCVITQNGDIVGEGFHYRAGEPHAEVHALRMAGDK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+HYGRTPPC E LIKAKV KV+ M DPNP V +G++ LRDAGI+V
Sbjct: 68 SVGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVAGRGIQMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ ++ LN +FI R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 EVGLLEQDAIALNPSFIKRMQTGLPFVQLKMAASLDGQTALANGKSQWITSEAARRDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRII 287
Y A ILS S T + +P S E QP R+I
Sbjct: 188 YRAQSGAILSTSKTVIEDNASLSVRWSDLPESVKAQYSESQLRQPVRVI 236
>gi|334144130|ref|YP_004537286.1| riboflavin biosynthesis protein RibD [Thioalkalimicrobium cyclicum
ALM1]
gi|333965041|gb|AEG31807.1| riboflavin biosynthesis protein RibD [Thioalkalimicrobium cyclicum
ALM1]
Length = 386
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 174/307 (56%), Gaps = 37/307 (12%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA+ ST PNP VGCV++K+G+++GEG+H +AG+PHAEV ALR AG+
Sbjct: 11 DSIWMNRALDLASLGRLSTRPNPAVGCVLIKEGQLIGEGWHQRAGEPHAEVLALRMAGDR 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+G+TPPC ALI A +K+VV+ M+DPNP V+ +G+ L+++GI+V
Sbjct: 71 ARGATAYVTLEPCSHFGKTPPCCNALITAGIKRVVIAMIDPNPRVSGRGIAALQESGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE------GVAESGGYY 250
T GV + ++LN+ F+ R+ G+P +L+ SV+ V G+ +A + G+
Sbjct: 131 TQGVAMKRAQQLNKGFVSRMQRGRPNVSLKLATSVDAKVALANGQSQWITNALARAQGHL 190
Query: 251 SQLLQEYDAIILSASST-------------KKYSIPASQEPDANQPFRIITVSNHASPIR 297
L + AII +S + +P +++ S +R
Sbjct: 191 --LRAQQCAIITGIASVITDDPRLTVRLDDSAFYAQGWSSAGRVEPMKVVVDSR----LR 244
Query: 298 IP---GLSEESSSKVIVFTDGEITVEPD----MGTKGIETVNL-----HQLNLKAVLDYC 345
IP L +++ + +I T + + D + KGI+ + H++NL +VL +
Sbjct: 245 IPLNAKLCQQADALIIYTTRATLCAQADKVAQLAAKGIKVHGVDCDPQHRVNLVSVLAHL 304
Query: 346 YSHGFCS 352
SH C+
Sbjct: 305 ASHYQCN 311
>gi|228934673|ref|ZP_04097506.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824925|gb|EEM70724.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 360
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 179/320 (55%), Gaps = 25/320 (7%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G
Sbjct: 1 MKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQARGG 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV
Sbjct: 61 TIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQE 256
+E K++NE F I+T +PF T++ ++++G + L + E+ ++ E
Sbjct: 121 CEEKSKKMNEVFNKYIMTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHKIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIV 311
AI++ A++ +K + P+ ++ P+ P R+I S +RIP + + + +
Sbjct: 181 NAAILVGANTVQKDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDGEAPTWI 235
Query: 312 FTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
FT E G K T +NL +LD G S+L++ G
Sbjct: 236 FTTSNHAAEKRKVLESAGVKVFVTSGEKHINLYEMLDVLGQKGVSSLLIEGGGEVN---- 291
Query: 367 LLKEGIEQNLLQKIVVEVLP 386
IE L+ K+++ P
Sbjct: 292 --ASFIENELMDKLILYFAP 309
>gi|403071155|ref|ZP_10912487.1| Riboflavin biosynthesis protein [Oceanobacillus sp. Ndiop]
Length = 364
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 179/342 (52%), Gaps = 25/342 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD FYM ++ A G T PNP+VG VIV D +IVG G H KAG+PHAE+ ALR AGE
Sbjct: 3 DDTFYMDLALKNAQAMKGQTDPNPLVGAVIVNDNRIVGVGAHLKAGEPHAEIHALRMAGE 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+H+GRT PC AL++A + KVV+ LDPNPIV G+ L+DAGI+
Sbjct: 63 QAKGATIYVTLEPCSHHGRTGPCAVALVEAGISKVVIATLDPNPIVAGNGVNILKDAGIE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V GV ++ ++NE F I+ KPF TL+ ++++G V +E Y
Sbjct: 123 VISGVLEQESIQMNEVFNKFIMKKKPFITLKSGITLDGKVASHTFHSKWITSEEARYDVH 182
Query: 253 LLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSE---ESSS 307
L+ IL+ +T PA ++ P+ P RI+ S +RIP ++ ++ +
Sbjct: 183 QLRSEHMAILTGINTVIKDNPALTARIPNGRNPIRIVM----DSSLRIPFDAQVITDNKA 238
Query: 308 KVIVFTDGEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
+ I+FT + +ET N V DY G S+L++ GN
Sbjct: 239 ETIIFTSQNYDKTKRKSLEKLHINVVETSGQQYTNPIEVADYLGERGISSLLIEGGGNIN 298
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
IE L+ KIV+ + P G G + T L +G
Sbjct: 299 ------ASFIENKLVDKIVLYIAPRLIG--GKDAPTFLEGIG 332
>gi|320529850|ref|ZP_08030927.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399]
gi|320137868|gb|EFW29773.1| riboflavin biosynthesis protein RibD [Selenomonas artemidis F0399]
Length = 369
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 162/293 (55%), Gaps = 16/293 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M + LA A G TSPNP+VG VIV+DG +VG G+H AG+PHAE+ ALR AGEL
Sbjct: 8 DEHFMWEALHLAEFARGRTSPNPLVGAVIVRDGIVVGSGWHRVAGEPHAEIHALRMAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRT PC EA+I A + +VV + DPNP+V G+ERLR AGI+V
Sbjct: 68 ARGATLYVTLEPCSHHGRTGPCAEAVIAAGIARVVTALSDPNPVVAGHGIERLRAAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
T GV E +R NE F+ +VT +PF TL+ ++++G + G +G + E
Sbjct: 128 TTGVLSEEARRQNEVFLKWVVTKRPFVTLKTAMTLDGKTASRTGASQWITGAEARTRVHE 187
Query: 257 Y----DAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+ DAI +L+ + +P P R++ S +P L++ ++
Sbjct: 188 WRDAHDAILVGIGTVLADDPSLTVRLP---HRTGKNPVRVVLDSTARTPHDAKLLTDGAA 244
Query: 307 SKVIVFTDGEITVEPDMGTK-GIETVNL--HQLNLKAVLDYCYSHGFCSVLVD 356
+I ++ + G E V ++++ A++D+ SV V+
Sbjct: 245 RTIIAVSERAAPKRTALLQACGAEVVTFGRERVDIPALMDFLGREELTSVFVE 297
>gi|334128895|ref|ZP_08502773.1| riboflavin biosynthesis protein RibD [Centipeda periodontii DSM
2778]
gi|333386137|gb|EGK57357.1| riboflavin biosynthesis protein RibD [Centipeda periodontii DSM
2778]
Length = 394
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 166/290 (57%), Gaps = 10/290 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR + +A A G TSPNP+VG VIV+DG IV G+H AG+PHAE+ ALR AGEL
Sbjct: 33 DESYMREALRIAEYARGRTSPNPLVGAVIVRDGAIVASGWHRAAGEPHAEIHALRMAGEL 92
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H+GRT PC EA+I A + +VV+ + DPNP+V +G+ L AGI+V
Sbjct: 93 ARGATLYVTLEPCAHHGRTGPCAEAVIAAGLARVVIALSDPNPLVAGRGIHLLTAAGIEV 152
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
T G+ ++ +R NE F+ + T +PF TL+ ++++G + G +G +
Sbjct: 153 TTGICEDEARRQNEIFLKWVTTKRPFVTLKTAMTLDGKIASHTGASQWITGAAARARVHA 212
Query: 256 ---EYDAIILSASS--TKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKV 309
EYDAI++ + S+ E + P RI+ S +P+ +++ ++ +
Sbjct: 213 YRNEYDAILVGIGTVLADDPSLTTRLEHGTGKNPLRIVLDSEARTPLDAKLVADGAAPTI 272
Query: 310 IVFTDGEITVEPDMGTK-GIETVNL--HQLNLKAVLDYCYSHGFCSVLVD 356
IV ++ ++ G E V L ++++ A+LDY + S+ V+
Sbjct: 273 IVVSERADHRRVNLLRACGAEVVTLGAQRVDIAALLDYLGAREITSLFVE 322
>gi|422782797|ref|ZP_16835582.1| riboflavin biosynthesis protein RibD [Escherichia coli TW10509]
gi|323976105|gb|EGB71198.1| riboflavin biosynthesis protein RibD [Escherichia coli TW10509]
Length = 367
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVMADDPA 203
>gi|416895837|ref|ZP_11925721.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_7v]
gi|417114451|ref|ZP_11965722.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2741]
gi|422802290|ref|ZP_16850784.1| riboflavin biosynthesis protein RibD [Escherichia coli M863]
gi|323965096|gb|EGB60555.1| riboflavin biosynthesis protein RibD [Escherichia coli M863]
gi|327254735|gb|EGE66351.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_7v]
gi|386141526|gb|EIG82676.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2741]
Length = 367
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVMADDPA 203
>gi|15599251|ref|NP_252745.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO1]
gi|418584559|ref|ZP_13148620.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418593656|ref|ZP_13157492.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P2]
gi|421518605|ref|ZP_15965279.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO579]
gi|9950253|gb|AAG07443.1|AE004822_3 riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO1]
gi|375045781|gb|EHS38356.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375046811|gb|EHS39366.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
MPAO1/P2]
gi|404348087|gb|EJZ74436.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAO579]
Length = 373
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + + LN FI R+ G PF ++ +S++G GE S Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|66047689|ref|YP_237530.1| riboflavin biosynthesis protein RibD:riboflavin-specific deaminase,
C-terminal, partial [Pseudomonas syringae pv. syringae
B728a]
gi|63258396|gb|AAY39492.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas syringae pv. syringae B728a]
Length = 366
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 129/190 (67%), Gaps = 3/190 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA K + ST PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGELA GA
Sbjct: 1 MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGELARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H GRTPPC +ALI+A + +VV M DPNP V+ +GL RL +AGI V GV
Sbjct: 61 TAYVTLEPCSHQGRTPPCADALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQCGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QLLQEY 257
+ + LN+ F+ R+ TG P+ ++ +S++G GE +G Q L+
Sbjct: 121 LESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRLRAQ 180
Query: 258 DAIILSASST 267
+++LS + T
Sbjct: 181 SSVVLSGADT 190
>gi|229145969|ref|ZP_04274348.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24]
gi|228637577|gb|EEK94028.1| Riboflavin biosynthesis protein [Bacillus cereus BDRD-ST24]
Length = 348
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 176/308 (57%), Gaps = 25/308 (8%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A GAT YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQARGATIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + D E+ Q+ E AI++ A++ +
Sbjct: 123 NKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIVFTDGEITVEP-- 321
K + P+ ++ P+ P RII S +RIP + + + +FT +
Sbjct: 183 KDN-PSLTTRIPNGRNPIRIIL----DSTLRIPMEANVVTDGEAPTWIFTTSNHAAKKKK 237
Query: 322 ---DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQ 378
+ G K T +NL +LD G S+L++ G IE L+
Sbjct: 238 ALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN------ASFIENKLMD 291
Query: 379 KIVVEVLP 386
K+++ V P
Sbjct: 292 KLILYVAP 299
>gi|94677040|ref|YP_589028.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94220190|gb|ABF14349.1| riboflavin biosynthesis protein RibD [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 378
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 145/240 (60%), Gaps = 19/240 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D FY+ +LA + +T+PNP VGCVI++D ++VGEG+H +AG+PHAE+ ALR AG
Sbjct: 2 KSDEFYLALAFKLARRGKLTTAPNPNVGCVIIRDHRVVGEGYHVRAGEPHAEIHALRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+A GATAY++LEPCNHYG TPPCTEALI A + +VV MLDPNP VN +GL RL+ A I
Sbjct: 62 AMAYGATAYITLEPCNHYGHTPPCTEALIAAGISRVVAAMLDPNPKVNGRGLYRLQQANI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V + + + +N+ F+ R+ TG P+ ++ S++G GE + Q +
Sbjct: 122 EVRHSIMLQDAEMINKGFLKRMRTGLPWIRVKLATSLDGRTAMASGESSWITSNQARQDV 181
Query: 255 QEYDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVS-NHASP 295
Q + A ILS S+T + S+PA +E + QP ++I S N +P
Sbjct: 182 QRFRAESDAILSTSATVLADNPTLNVRWLSLPADIQCLCKEENIRQPIKVIIDSANRVNP 241
>gi|386309522|ref|YP_006005578.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418243764|ref|ZP_12870219.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433550599|ref|ZP_20506643.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Yersinia
enterocolitica IP 10393]
gi|318604604|emb|CBY26102.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia enterocolitica subsp. palearctica Y11]
gi|351776734|gb|EHB19030.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431789734|emb|CCO69683.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Yersinia
enterocolitica IP 10393]
Length = 369
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 142/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA +TSPNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A VK+VV M DPNP V +GL +L+ AG++V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 DHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 YDA---IILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
+ A ILS S+T PA QE DA QP RII S N +P
Sbjct: 184 FRAQSSAILSTSATVLADDPALTVRWQELDAQTQALYPQDALRQPVRIIVDSHNRVTP 241
>gi|374703969|ref|ZP_09710839.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. S9]
Length = 378
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K + ST PNP VGCVIV+DG+IVGEG+H ++G+PHAEV ALR AG
Sbjct: 4 DNAFMARALELARKGLYSTHPNPRVGCVIVQDGRIVGEGWHARSGEPHAEVHALRQAGAR 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V+ GL RL AGI V
Sbjct: 64 AKGATAYVTLEPCSHHGRTPPCADALIDAGVARVVAAMQDPNPQVSGSGLLRLMQAGIAV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ G PF ++ +S++G GE +G Q
Sbjct: 124 QSGVLEAQARELNAGFIKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 183
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 184 LRARSSVVLSGADT 197
>gi|288936867|ref|YP_003440926.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22]
gi|290510077|ref|ZP_06549447.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55]
gi|288891576|gb|ADC59894.1| riboflavin biosynthesis protein RibD [Klebsiella variicola At-22]
gi|289776793|gb|EFD84791.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 1_1_55]
Length = 367
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 144/238 (60%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|332160725|ref|YP_004297302.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664955|gb|ADZ41599.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 369
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 142/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA +TSPNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A VK+VV M DPNP V +GL +L+ AG++V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 DHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 YDA---IILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
+ A ILS S+T PA QE DA QP RII S N +P
Sbjct: 184 FRAQSSAILSTSATVLADDPALTVRWQELDAQTQALYPQDALRQPVRIIVDSHNRVTP 241
>gi|387890191|ref|YP_006320489.1| riboflavin biosynthesis protein RibD [Escherichia blattae DSM 4481]
gi|414595545|ref|ZP_11445164.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia blattae NBRC 105725]
gi|386925024|gb|AFJ47978.1| riboflavin biosynthesis protein RibD [Escherichia blattae DSM 4481]
gi|403193508|dbj|GAB82816.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia blattae NBRC 105725]
Length = 367
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA + +T+PNP VGCVIV+DG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEFYMARALQLAGRGCFTTAPNPNVGCVIVRDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI+A V +VV M DPNP V +GL RL+ AG++V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIEAGVSRVVAAMQDPNPQVAGRGLHRLKQAGVEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F R+ TG P+ ++ S++G GE + Q
Sbjct: 123 SHGLMRHEAEALNRGFFKRMRTGFPWVQVKLGASLDGRTAMASGESQWITSPQSRRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ A IL++S+T
Sbjct: 183 LRARSAAILTSSAT 196
>gi|229110810|ref|ZP_04240373.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15]
gi|228672689|gb|EEL27970.1| Riboflavin biosynthesis protein [Bacillus cereus Rock1-15]
Length = 348
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 178/312 (57%), Gaps = 33/312 (10%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE GAT YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQVRGATIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGVCEEESKKVNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVL----DQLGEGVAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + D E+ Q+ E AI++ A++ +
Sbjct: 123 NKYILTKRPFVTIKSGVTLDGKIATSSSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRII------------TVSNHASPIRIPGLSEESSSKVIVFTD 314
K + P+ ++ P+ P RII V++ +P I S ++ K I +
Sbjct: 183 KDN-PSLTTRIPNGRNPIRIILDSTLRIPMEANVVTDGEAPTWIFTTSNHAAKKKIALEN 241
Query: 315 GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQ 374
+ V T G + +NLH++ LD G S+L++ G IE
Sbjct: 242 AGVKV---FVTSGEKHINLHEM-----LDVLGQKGVSSLLIEGGGEVN------ASFIEN 287
Query: 375 NLLQKIVVEVLP 386
L+ K+++ V P
Sbjct: 288 KLMDKLILYVAP 299
>gi|123443368|ref|YP_001007342.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|420257480|ref|ZP_14760238.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|122090329|emb|CAL13195.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|404515129|gb|EKA28906.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 369
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 142/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA +TSPNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A VK+VV M DPNP V +GL +L+ AG++V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 DHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 YDA---IILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
+ A ILS S+T PA QE DA QP RII S N +P
Sbjct: 184 FRAQSSAILSTSATVLADDPALTVRWQELDAQTQALYPQDALRQPVRIIVDSHNRVTP 241
>gi|325276595|ref|ZP_08142337.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51]
gi|324098274|gb|EGB96378.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. TJI-51]
Length = 376
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 9 DAHYMARALELARKGLFTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGER 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GA AYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP V +GL RL +AGI+V
Sbjct: 69 ARGACAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGRGLRRLAEAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN F+ R+ G P+ + +S++G GE +G Q
Sbjct: 129 ASGVLEAEARALNPGFLKRMEHGVPYVRAKLAMSLDGRTAMASGESQWITGPAARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+++++
Sbjct: 189 LRARSSVVLTSAAS 202
>gi|169827319|ref|YP_001697477.1| riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus
C3-41]
gi|168991807|gb|ACA39347.1| Riboflavin biosynthesis protein ribD [Lysinibacillus sphaericus
C3-41]
Length = 375
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 166/292 (56%), Gaps = 12/292 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ ++LA A G+T+PNP+VG VIVK+ IVG G H KAG+PHAEV A R AGE
Sbjct: 10 DEKYMQLALDLAASAKGNTNPNPLVGAVIVKNDIIVGTGLHRKAGEPHAEVHAFRMAGEH 69
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+ AT YV+LEPC+H+G+TPPC + + V +VVV M DPNP V +G++ LRDAGI V
Sbjct: 70 AQNATLYVTLEPCSHFGKTPPCANLVKDSGVSRVVVAMQDPNPTVAGRGIQLLRDAGITV 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ---- 252
VGV ++ +RLNE FIH ++T +PF ++ ++V+G + G +G +
Sbjct: 130 EVGVLEQQARRLNERFIHNMLTKRPFIISKFAMTVDGKIATHTGHSKWVTGKAAREDVHR 189
Query: 253 LLQEYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
+ E D I++ + + + E P RII S +P+ L+ E + +
Sbjct: 190 IRHEVDGILVGVGTVIADNPSLTTRLSEGYGKNPTRIIMDSLLRTPLDANVLNTEEAPTI 249
Query: 310 IVFTDGEITVEPD-MGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVD 356
+V ++ + D + KG+ + + + LN+ +L Y HG +L++
Sbjct: 250 LVCSNDVSQEKIDLLINKGLTVLPIEKDERGLNIDEMLARLYEHGITDILLE 301
>gi|145638234|ref|ZP_01793844.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII]
gi|145272563|gb|EDK12470.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittII]
gi|309751389|gb|ADO81373.1| Riboflavin biosynthesis protein RibD [Haemophilus influenzae R2866]
Length = 372
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AANLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGSDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVLTDDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|238019274|ref|ZP_04599700.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748]
gi|237863973|gb|EEP65263.1| hypothetical protein VEIDISOL_01138 [Veillonella dispar ATCC 17748]
Length = 404
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 117/166 (70%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM+R + LA A G TSPNP+VG V+VKD I+GEG+H KAG HAEV AL AG+
Sbjct: 3 DDVAYMKRAIALAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAGD 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYG+TPPC +I+A + KVVVG DPNP+V+ KG++ LR+AGI+
Sbjct: 63 NAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVVVGSTDPNPLVSGKGMDLLREAGIE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V V E C LNE F I TGKPF T++ +S++G + G+
Sbjct: 123 VVCPVCSEECAELNEHFFTYIQTGKPFVTIKSAMSLDGKIATFTGQ 168
>gi|228953669|ref|ZP_04115709.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229070840|ref|ZP_04204068.1| Riboflavin biosynthesis protein [Bacillus cereus F65185]
gi|229179672|ref|ZP_04307022.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W]
gi|228603778|gb|EEK61249.1| Riboflavin biosynthesis protein [Bacillus cereus 172560W]
gi|228712230|gb|EEL64177.1| Riboflavin biosynthesis protein [Bacillus cereus F65185]
gi|228805903|gb|EEM52482.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 350
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 175/308 (56%), Gaps = 25/308 (8%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G T YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQARGGTIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + L + E+ Q+ E AI++ A++ +
Sbjct: 123 NKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIVFTDGEITVEP-- 321
K + P+ ++ P+ P R+I S +RIP + + + +FT E
Sbjct: 183 KDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPTWIFTTSNHAEEKKK 237
Query: 322 ---DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQ 378
+ G K T +NL +LD G S+L++ G IE L+
Sbjct: 238 ALENAGVKVFVTSGEKHINLHEMLDVLGQKGVSSLLIEGGGEVN------ASFIENKLMD 291
Query: 379 KIVVEVLP 386
KI++ P
Sbjct: 292 KIILYFAP 299
>gi|342903772|ref|ZP_08725578.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M21621]
gi|341954599|gb|EGT81075.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M21621]
Length = 372
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AG+
Sbjct: 8 DHKFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGKN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ +E D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVIADDPSLNVRWDEFPENLKTEYKEEDLRQPVRVILDSQH 241
>gi|229191491|ref|ZP_04318474.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876]
gi|228591971|gb|EEK49807.1| Riboflavin biosynthesis protein [Bacillus cereus ATCC 10876]
Length = 350
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 175/308 (56%), Gaps = 25/308 (8%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G T YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAGEQARGGTIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + L + E+ Q+ E AI++ A++ +
Sbjct: 123 NKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIVFTDGEITVEP-- 321
K + P+ ++ P+ P R+I S +RIP + + + +FT E
Sbjct: 183 KDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVTDREAPTWIFTTSNHAEEKKK 237
Query: 322 ---DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQ 378
+ G K T +NL +LD G S+L++ G IE L+
Sbjct: 238 ALENAGVKVFVTSGEKHINLHEMLDVLGEKGVSSLLIEGGGEVN------ASFIENKLMD 291
Query: 379 KIVVEVLP 386
KI++ P
Sbjct: 292 KIILYFAP 299
>gi|313200621|ref|YP_004039279.1| riboflavin biosynthesis protein ribd [Methylovorus sp. MP688]
gi|312439937|gb|ADQ84043.1| riboflavin biosynthesis protein RibD [Methylovorus sp. MP688]
Length = 368
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 167/295 (56%), Gaps = 19/295 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCVIVKDG+IVGEG H KAG+PHAEV ALR AG+L
Sbjct: 6 DHQMMARALRLAEQGLYTTTPNPRVGCVIVKDGQIVGEGAHLKAGEPHAEVHALRQAGDL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA AYV+LEPC+H+GRTPPC +ALIKA VK+VV M DPNP V GL+RL+ GI V
Sbjct: 66 AQGADAYVTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGLQRLQAQGIAV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + + LN FI R+ +PF + S++G Q G +G + +Q
Sbjct: 126 QSGLLEAQARSLNAGFISRMTRRRPFVRSKIAASLDGATALQNGISQWITGPEARKDVQH 185
Query: 257 YDA---IILSASSTKKYSIPA------SQEPDANQPFRIITVSN-HASP-IRIPGLSEES 305
+ A ++L+ T P + E QP R+I S+ SP RI +
Sbjct: 186 WRAQSCVMLTGIGTVLADDPQLSVRDEAGELQGRQPLRVIVDSHLQISPQARI----LQG 241
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNL--HQ--LNLKAVLDYCYSHGFCSVLVD 356
+ +IV+ + G+E ++L HQ ++L ++L+ S G V+V+
Sbjct: 242 GNALIVYGSASADRIAALCQHGVELMHLPDHQSRVSLDSLLELLASRGINEVMVE 296
>gi|254242738|ref|ZP_04936060.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
2192]
gi|126196116|gb|EAZ60179.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
2192]
Length = 373
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + + LN FI R+ G PF ++ +S++G GE S Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|107103570|ref|ZP_01367488.1| hypothetical protein PaerPA_01004640 [Pseudomonas aeruginosa PACS2]
gi|218889663|ref|YP_002438527.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
LESB58]
gi|386056951|ref|YP_005973473.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
M18]
gi|392982217|ref|YP_006480804.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
DK2]
gi|416867151|ref|ZP_11916027.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
138244]
gi|420137628|ref|ZP_14645593.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CIG1]
gi|421151999|ref|ZP_15611591.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 14886]
gi|421158064|ref|ZP_15617362.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 25324]
gi|424939065|ref|ZP_18354828.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCMG1179]
gi|451982967|ref|ZP_21931264.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas aeruginosa 18A]
gi|218769886|emb|CAW25647.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
LESB58]
gi|334833753|gb|EGM12796.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
138244]
gi|346055511|dbj|GAA15394.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCMG1179]
gi|347303257|gb|AEO73371.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
M18]
gi|392317722|gb|AFM63102.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
DK2]
gi|403249604|gb|EJY63095.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CIG1]
gi|404526131|gb|EKA36363.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 14886]
gi|404550000|gb|EKA58808.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
ATCC 25324]
gi|451759335|emb|CCQ83787.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas aeruginosa 18A]
gi|453043270|gb|EME91002.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PA21_ST175]
Length = 373
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + + LN FI R+ G PF ++ +S++G GE S Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|419411014|ref|ZP_13951688.1| riboflavin biosynthesis protein RibD, partial [Escherichia coli
DEC15E]
gi|378261505|gb|EHY21299.1| riboflavin biosynthesis protein RibD, partial [Escherichia coli
DEC15E]
Length = 220
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 119/165 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGE 167
>gi|397688289|ref|YP_006525608.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
10701]
gi|395809845|gb|AFN79250.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri DSM
10701]
Length = 375
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 116/165 (70%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV+DG+ VGEG+H +AG+PHAEV ALR AG+
Sbjct: 5 DHVWMARALQLARKGLYSTHPNPRVGCVIVRDGERVGEGWHVRAGEPHAEVHALRQAGDR 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EAL+KA V +VV M DPNP+V +GLERLR GI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCAEALVKAGVARVVAAMRDPNPLVAGRGLERLRSVGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
GV + + LN F+ R+ G P+ + +S++G GE
Sbjct: 125 ASGVLEGEARELNIGFVKRMEHGLPYLRAKLAMSLDGRTAMASGE 169
>gi|421178771|ref|ZP_15636374.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa E2]
gi|404547869|gb|EKA56849.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa E2]
Length = 373
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + + LN FI R+ G PF ++ +S++G GE S Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|421263491|ref|ZP_15714535.1| hypothetical protein KCU_03994 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425065610|ref|ZP_18468730.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pasteurella
multocida subsp. gallicida P1059]
gi|401689521|gb|EJS84943.1| hypothetical protein KCU_03994 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|404383986|gb|EJZ80431.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pasteurella
multocida subsp. gallicida P1059]
Length = 375
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 135/234 (57%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +ELA K +T+PNP VGCV+VKDG IVG GFH KAG+ HAEV ALR+AGE
Sbjct: 7 DVVYMQMALELAEKGQFTTTPNPSVGCVLVKDGIIVGRGFHVKAGEAHAEVMALREAGEN 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC + LI A V KVV M DPNP V +GL L AGI+
Sbjct: 67 ARGATAYVTLEPCSHFGRTPPCAQGLIDAGVVKVVSAMCDPNPQVAGRGLRMLSYAGIES 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ TG+P+ L+ +S++G GE +G +Q
Sbjct: 127 AVGLLAEKAEWLNRGFLKRMRTGRPYVQLKMAMSLDGRTAMANGESKWITGELARADVQA 186
Query: 257 YDA---IILSASSTKKYSIP-----ASQEPDA----------NQPFRIITVSNH 292
A ILS S+T P Q PD QP R+I S H
Sbjct: 187 ERAKASAILSTSATVLADDPLLNVRWQQLPDKVKADYTQAQLRQPVRVILDSQH 240
>gi|422296705|ref|ZP_16384370.1| riboflavin biosynthesis protein RibD [Pseudomonas avellanae BPIC
631]
gi|407992071|gb|EKG33775.1| riboflavin biosynthesis protein RibD [Pseudomonas avellanae BPIC
631]
Length = 378
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM VELA K + ST PNP VGCVIV+DG+IVG+G+H +AG+ HAEV ALR+AGEL
Sbjct: 9 DVHYMAHAVELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGESHAEVHALREAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +ALI A + +VV M DPNP V GL RL AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ FI R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|352106423|ref|ZP_08961409.1| riboflavin biosynthesis protein RibD [Halomonas sp. HAL1]
gi|350597763|gb|EHA13890.1| riboflavin biosynthesis protein RibD [Halomonas sp. HAL1]
Length = 388
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 150/255 (58%), Gaps = 15/255 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+DD +M + ++LA K + +T PNP VGCVIV+D +IVGEGFH +AG+PHAE+ AL AG
Sbjct: 7 QDDYRFMAQALKLARKGLYTTDPNPRVGCVIVRDEQIVGEGFHRRAGEPHAEIHALNAAG 66
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+H GRT PC AL KAKV +VV+ M DPNP V+ +G+ L +AGI
Sbjct: 67 ERAQGATAYVTLEPCSHTGRTGPCAVALQKAKVARVVIAMQDPNPQVSGRGIRLLEEAGI 126
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG------- 247
+V V + + + LN FI R+ T +PF L+ +S++G GE +G
Sbjct: 127 EVAVSLLESEARALNPGFIARMTTQRPFVRLKMAMSLDGRTAMGSGESQWITGPEARTQV 186
Query: 248 ----GYYSQLLQEYDAIILSAS----STKKYSIPASQEPDANQPFRIITVSNHASPIRIP 299
S +L ++II+ S ++ S+ + E QP R++ ++ P+
Sbjct: 187 QRLRARSSAILSGVESIIMDDSRLTLRAEQLSLANADEVVQRQPLRVVLDTHLRLPLAAA 246
Query: 300 GLSEESSSKVIVFTD 314
LSE + V+ D
Sbjct: 247 CLSEPGRTLVVTTPD 261
>gi|116052093|ref|YP_789063.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|421172675|ref|ZP_15630440.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CI27]
gi|115587314|gb|ABJ13329.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404537365|gb|EKA46968.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
CI27]
Length = 373
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + + LN FI R+ G PF ++ +S++G GE S Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|333368843|ref|ZP_08460998.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. 1501(2011)]
gi|332976011|gb|EGK12882.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. 1501(2011)]
Length = 374
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 128/195 (65%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D +YM +E A K + +T PNP VGCV+VKDG I+G GFHPKAGQPHAEVFALR+A +
Sbjct: 35 EDYYYMNLAIEAAKKGLYTTRPNPAVGCVLVKDGLIIGTGFHPKAGQPHAEVFALRNATQ 94
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
ATAYV+LEPC+H G+TPPC EALIKA+V +VV+ LDPNP V +G+ L DAGI
Sbjct: 95 SVAAATAYVTLEPCSHTGKTPPCAEALIKAQVSRVVIAGLDPNPKVAGRGVRLLLDAGIK 154
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V+VGV E ++LN F+ + T P+ L+ S++G GE +G + +Q
Sbjct: 155 VSVGVCTEQAEQLNLGFLKSMRTQMPYVRLKIASSLDGRTAMASGESKWITGSAAREDVQ 214
Query: 256 EYDAI---ILSASST 267
+ A+ I++ S T
Sbjct: 215 QLRALSGAIITGSQT 229
>gi|82542902|ref|YP_406849.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Shigella boydii Sb227]
gi|416296109|ref|ZP_11651315.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella flexneri CDC 796-83]
gi|417680553|ref|ZP_12329938.1| riboflavin biosynthesis protein RibD [Shigella boydii 3594-74]
gi|420324019|ref|ZP_14825805.1| riboflavin biosynthesis protein RibD [Shigella flexneri CCH060]
gi|420351182|ref|ZP_14852381.1| riboflavin biosynthesis protein RibD [Shigella boydii 4444-74]
gi|81244313|gb|ABB65021.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Shigella boydii Sb227]
gi|320186043|gb|EFW60788.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella flexneri CDC 796-83]
gi|332098511|gb|EGJ03477.1| riboflavin biosynthesis protein RibD [Shigella boydii 3594-74]
gi|391256909|gb|EIQ16031.1| riboflavin biosynthesis protein RibD [Shigella flexneri CCH060]
gi|391289037|gb|EIQ47533.1| riboflavin biosynthesis protein RibD [Shigella boydii 4444-74]
Length = 367
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|254876058|ref|ZP_05248768.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254842079|gb|EET20493.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 356
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 119/159 (74%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
+ +YM++ + LA + S SPNPMVGC+IVK+G I+ EG+H G+ HAE++AL+ AG+
Sbjct: 5 ENYYMQQALTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAVGEAHAEIYALKKAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPCT+ALI+A ++KVVV LDPNP+V KG+++L+DAGI+V
Sbjct: 65 AKGATAYVTLEPCCHHGRTPPCTDALIRAGIQKVVVATLDPNPLVAGKGIQKLKDAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV 235
VG+ + + N+ F H T KPF ++ +S++G +
Sbjct: 125 KVGILQKQAQEQNKIFFHYQKTQKPFVYAKWAMSLDGKI 163
>gi|399522403|ref|ZP_10763067.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109837|emb|CCH39628.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas pseudoalcaligenes CECT 5344]
Length = 371
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R + LA K + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 5 DHLFMARALRLARKGLYSTHPNPRVGCVIVRDGEIVGEGWHARAGEPHAEVHALRQAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V GL RL AGI+V
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGSGLLRLAQAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G PF ++ +S++G GE +G Q
Sbjct: 125 ASGVLESEARALNAGFIKRMESGLPFVRVKSAMSLDGRTAMASGESQWITGPAARAEVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRAQSSVVLSGADT 198
>gi|338813394|ref|ZP_08625523.1| riboflavin biosynthesis protein RibD [Acetonema longum DSM 6540]
gi|337274753|gb|EGO63261.1| riboflavin biosynthesis protein RibD [Acetonema longum DSM 6540]
Length = 394
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 201/365 (55%), Gaps = 20/365 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA + +G TSPNPMVG V+ +DGK VG+G+H +AG PHAEV AL+ AG+
Sbjct: 8 DQQFMQMALDLAKQGLGRTSPNPMVGAVVAQDGKAVGQGWHQRAGTPHAEVHALQAAGDQ 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H+G+TPPCT+A+IKA +++VVV M DPNP V G+ RL+ AG++V
Sbjct: 68 ANGATLYVTLEPCCHHGKTPPCTDAVIKAGIRRVVVAMTDPNPCVGGGGIARLKAAGVEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ---L 253
G+ + RLNE FI I TG PFA L+ ++++G + G +G Q +
Sbjct: 128 VSGILAQEAARLNEVFIKWISTGLPFAILKTAMTLDGKIATVSGRSKWITGDAARQRVHM 187
Query: 254 LQEYDAIILSASSTKKYSIPA--SQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVI 310
L++ IL+ T P+ ++ P + P RII S P+ +++ + +I
Sbjct: 188 LRDRCDAILAGIGTVLADDPSLTTRLPQGGKNPIRIILDSQARIPLDANVITDVLAPTII 247
Query: 311 VFTDGEITVE-PDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
V + + +KG+E + + L+L+ + S SVLV+ G
Sbjct: 248 VVGPHAPAEKLTALRSKGVEILAVRCRDGGLDLRELFQTLGSRNITSVLVE--GGAAVNA 305
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNG---SDGGNPHTLLNSLGKRLILKNLQPKMSSQSIV 422
L++E NL+ K+ + P + G + G + ++ + + L+++ + Q ++
Sbjct: 306 GLIRE----NLIDKVYWFIAPKFFGGISAPGPVGGEGIAAVDQAVALEDIAVEAIDQDLM 361
Query: 423 LEGYL 427
+ GY+
Sbjct: 362 ITGYV 366
>gi|300924134|ref|ZP_07140126.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1]
gi|301330725|ref|ZP_07223327.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1]
gi|422960298|ref|ZP_16971746.1| riboflavin biosynthesis protein RibD [Escherichia coli H494]
gi|450211032|ref|ZP_21894171.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O08]
gi|300419587|gb|EFK02898.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 182-1]
gi|300843386|gb|EFK71146.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 78-1]
gi|371594096|gb|EHN82968.1| riboflavin biosynthesis protein RibD [Escherichia coli H494]
gi|449322647|gb|EMD12630.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O08]
Length = 367
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA AYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|419384553|ref|ZP_13925457.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14D]
gi|378237131|gb|EHX97158.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14D]
Length = 355
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 119/165 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGE 167
>gi|49088842|gb|AAT51612.1| PA4056, partial [synthetic construct]
Length = 374
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN FI R+ G PF ++ +S++G GE +G +Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 257 YDA---IILSASST 267
A ++LS + T
Sbjct: 185 LSARSSVVLSGADT 198
>gi|333892348|ref|YP_004466223.1| riboflavin biosynthesis protein RibD [Alteromonas sp. SN2]
gi|332992366|gb|AEF02421.1| riboflavin biosynthesis protein RibD [Alteromonas sp. SN2]
Length = 404
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 141/230 (61%), Gaps = 16/230 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGK-IVGEGFHPKAGQPHAEVFALRDAGE 135
D ++M + + LA K +TSPNP VGCVIV + +G+GFH +AG PHAE+ ALR+AG+
Sbjct: 38 DYYWMAKAIRLAQKGQFTTSPNPRVGCVIVNNNNDSIGQGFHVQAGTPHAEIHALREAGK 97
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GATAYV+LEPC+HYGRTPPC EALIKA+V +VV+ M DPNP V+ G+ L+DAGI+
Sbjct: 98 KAKGATAYVTLEPCSHYGRTPPCAEALIKAQVSRVVIAMTDPNPNVSGNGIRMLQDAGIE 157
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V+ + LN FI R++TGKP+ ++ +SV+G + Q G +G + +Q
Sbjct: 158 VSSDIMSAESAALNPGFIKRMLTGKPYVRVKLGISVDGKIALQNGNSQWITGPEARRDVQ 217
Query: 256 EYDA---IILSASSTKKYSIPA-SQEPDA-----------NQPFRIITVS 290
Y A +L+ S T K P+ PD QP RII S
Sbjct: 218 HYRAQSCAVLTGSGTVKADNPSLLVRPDEAKFAHYPLEAIRQPVRIIVNS 267
>gi|401564568|ref|ZP_10805451.1| riboflavin biosynthesis protein RibD [Selenomonas sp. FOBRC6]
gi|400188721|gb|EJO22867.1| riboflavin biosynthesis protein RibD [Selenomonas sp. FOBRC6]
Length = 367
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 144/245 (58%), Gaps = 7/245 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR + +A A G TSPNP+VG VIV+DG I+ G+H AG+PHAE+ ALR AGEL
Sbjct: 5 DESYMREALRMAAYARGRTSPNPLVGAVIVRDGTIIASGWHRAAGEPHAEIHALRMAGEL 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H+GRT PC EA+I A + +VVV + DPNP+V +GL LR AGI+
Sbjct: 65 ARGATLYVTLEPCTHHGRTGPCAEAVIAAGIARVVVALSDPNPLVAGRGLAMLRAAGIET 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + +R NE F+ + T +PF TL+ ++++G + G E+ +
Sbjct: 125 ETGVCEHEARRQNEVFLKWVTTKRPFVTLKTAMTLDGKIASHTGASQWITGEAARARVHI 184
Query: 254 LQEYDAIILSASSTKKYSIPA--SQEPD--ANQPFRIITVSNHASPIRIPGLSEESSSKV 309
++ IL T P+ ++ PD + P RI+ S +PI L++ ++S V
Sbjct: 185 YRDVHDAILVGIGTVLADDPSLTTRLPDRTGHNPLRIVLDSEARTPIDAKLLTDGAASTV 244
Query: 310 IVFTD 314
I ++
Sbjct: 245 IAVSE 249
>gi|167626935|ref|YP_001677435.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|167596936|gb|ABZ86934.1| pyrimidine reductase/pyrimidine deaminase [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 356
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 119/159 (74%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
+ +YM++ + LA + S SPNPMVGC+IVK+G I+ EG+H G+ HAE++AL+ AG+
Sbjct: 5 ENYYMQQALTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAVGEAHAEIYALKKAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPCT+ALI+A ++KVVV LDPNP+V KG+++L+DAGI+V
Sbjct: 65 AKGATAYVTLEPCCHHGRTPPCTDALIRAGIQKVVVATLDPNPLVAGKGIQKLKDAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV 235
VG+ + + N+ F H T KPF ++ +S++G +
Sbjct: 125 KVGILQKQAQEQNKIFFHYQKTQKPFVYAKWAMSLDGKI 163
>gi|187734040|ref|YP_001879123.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Shigella boydii CDC 3083-94]
gi|421681114|ref|ZP_16120944.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1485-80]
gi|187431032|gb|ACD10306.1| riboflavin biosynthesis protein RibD [Shigella boydii CDC 3083-94]
gi|404341862|gb|EJZ68264.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1485-80]
Length = 367
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|332281560|ref|ZP_08393973.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shigella sp. D9]
gi|332103912|gb|EGJ07258.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shigella sp. D9]
Length = 367
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA AYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|378953127|ref|YP_005210615.1| protein RibD [Pseudomonas fluorescens F113]
gi|359763141|gb|AEV65220.1| RibD [Pseudomonas fluorescens F113]
Length = 377
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHYMARALELARRGHYTTHPNPRVGCVIVREGQIVGEGWHIRAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LNE F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGAAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|148828121|ref|YP_001292874.1| hypothetical protein CGSHiGG_08285 [Haemophilus influenzae PittGG]
gi|148719363|gb|ABR00491.1| hypothetical protein CGSHiGG_08285 [Haemophilus influenzae PittGG]
Length = 372
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPETLKTEYKKEDLRQPVRVILDSQH 241
>gi|254236945|ref|ZP_04930268.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
C3719]
gi|126168876|gb|EAZ54387.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
C3719]
Length = 373
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV + + LN FI R+ G PF ++ +S++G GE S Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSRADT 198
>gi|313109499|ref|ZP_07795455.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
39016]
gi|386068158|ref|YP_005983462.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCGM2.S1]
gi|310881957|gb|EFQ40551.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
39016]
gi|348036717|dbj|BAK92077.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 373
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVGGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ G PF ++ +S++G GE +G Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|70732823|ref|YP_262590.1| riboflavin biosynthesis protein RibD [Pseudomonas protegens Pf-5]
gi|68347122|gb|AAY94728.1| riboflavin biosynthesis protein RibD [Pseudomonas protegens Pf-5]
Length = 377
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K ST PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGEL
Sbjct: 11 DAHYMARALELARKGRYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRAAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGID
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIDT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + +N+ F+ R+ G P+ ++ +S++G GE +G +Q
Sbjct: 131 HGGVLEGEARAINKGFLKRMEHGLPYVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAESSVVLTGADT 204
>gi|387605923|ref|YP_006094779.1| riboflavin biosynthesis protein [Escherichia coli 042]
gi|284920223|emb|CBG33282.1| riboflavin biosynthesis protein [Escherichia coli 042]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|417120964|ref|ZP_11970418.1| riboflavin biosynthesis protein RibD [Escherichia coli 97.0246]
gi|386148694|gb|EIG95129.1| riboflavin biosynthesis protein RibD [Escherichia coli 97.0246]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA AYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGAIAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + QL
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQL 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|260581778|ref|ZP_05849575.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae NT127]
gi|260095371|gb|EEW79262.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae NT127]
Length = 372
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
++GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 SKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + + +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLSDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGSDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVLADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|410091956|ref|ZP_11288500.1| riboflavin biosynthesis protein RibD [Pseudomonas viridiflava
UASWS0038]
gi|409760699|gb|EKN45823.1| riboflavin biosynthesis protein RibD [Pseudomonas viridiflava
UASWS0038]
Length = 378
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + ST PNP VGCVIV++G+IVGEG+H AG+PHAEV ALR AGE
Sbjct: 9 DVHYMARALELARKGLYSTHPNPRVGCVIVREGQIVGEGWHALAGEPHAEVHALRQAGEQ 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 69 ARGATAYVTLEPCSHHGRTPPCADALVNAGVTRVVASMQDPNPEVAGRGLLRLMTAGIAV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ FI R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLEAEARALNKGFIKRMETGQPYVRVKLAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|365838367|ref|ZP_09379712.1| riboflavin biosynthesis protein RibD [Hafnia alvei ATCC 51873]
gi|364559916|gb|EHM37877.1| riboflavin biosynthesis protein RibD [Hafnia alvei ATCC 51873]
Length = 373
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 130/201 (64%), Gaps = 3/201 (1%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
+ N + D FYM R ELA + +T+PNP VGCVIV + +IVGEG+H +AG+PHAEV A
Sbjct: 1 MHNQPRGDEFYMARAFELARRGRFTTTPNPNVGCVIVLNDEIVGEGYHLRAGEPHAEVHA 60
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
LR AG+ A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL +L
Sbjct: 61 LRMAGDKARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPNVAGRGLFKL 120
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
+ AGIDV+ G+ + +N F+ R+ TG PF L+ S++G GE +
Sbjct: 121 QQAGIDVSHGLMMNEAEAVNRGFLKRMRTGFPFVQLKMAASLDGRTAMASGESQWITSAA 180
Query: 250 YSQLLQEYDA---IILSASST 267
Q +Q Y A ILS+S+T
Sbjct: 181 ARQDVQRYRAQSSAILSSSAT 201
>gi|422604396|ref|ZP_16676413.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. mori str. 301020]
gi|330888055|gb|EGH20716.1| riboflavin biosynthesis protein RibD [Pseudomonas syringae pv. mori
str. 301020]
Length = 276
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR A EL
Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQASEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q
Sbjct: 129 QCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQR 188
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 189 LRAQSSVVLTGADT 202
>gi|320157206|ref|YP_004189585.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Vibrio vulnificus MO6-24/O]
gi|319932518|gb|ADV87382.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Vibrio vulnificus MO6-24/O]
Length = 368
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 115/158 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCV+++DG+IVGEGFH +AG+PHAEV A+R AG+
Sbjct: 8 DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGEPHAEVHAMRMAGDK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA V +VV M DPNP V +G LR+AGI+V
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFAMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGH 234
+VG+ + LN AFI R+ TG PF L+ S++G
Sbjct: 128 SVGLLQTEAEALNPAFIKRMKTGMPFVQLKMAASLDGQ 165
>gi|392556143|ref|ZP_10303280.1| riboflavin biosynthesis protein [Pseudoalteromonas undina NCIMB
2128]
Length = 375
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 149/254 (58%), Gaps = 17/254 (6%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+DD YM R +ELA K +T+PNP VGCV+VK+ K++GEGFH AGQ HAEV AL AG
Sbjct: 9 EDDKRYMARAIELAKKGRFTTTPNPNVGCVLVKNNKVIGEGFHQLAGQGHAEVNALTMAG 68
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+HYGRTPPC E L A VKKVV M+D NP V KGL+ L DAGI
Sbjct: 69 ENAKGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVVAAMVDSNPQVAGKGLKILADAGI 128
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V G+ +E + LN F R+ G PF T + S++G + G+ +G Q +
Sbjct: 129 EVAYGLLEEQARALNLGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDV 188
Query: 255 QEYDA---IILSASST-----KKYSIPASQEPDA-------NQPFRIITVSNHASPIRIP 299
Q Y A IL+ + T K ++ + P + QP R+I S + +
Sbjct: 189 QLYRAQSCAILTGADTVLMDDAKLNVRPEELPHSLPTNLPLRQPVRVIIDSQNRLTPELA 248
Query: 300 GLSEESSSKVIVFT 313
S + S+VI+FT
Sbjct: 249 LFSIQ--SEVIIFT 260
>gi|117919545|ref|YP_868737.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. ANA-3]
gi|117611877|gb|ABK47331.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. ANA-3]
Length = 381
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 116/162 (71%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N + D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR
Sbjct: 2 NWSELDNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALR 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGELA GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRD
Sbjct: 62 MAGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRD 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
AGI+V VG+ + LN F+ R+ +G P+ T++ S++G
Sbjct: 122 AGIEVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDG 163
>gi|425303916|ref|ZP_18693705.1| riboflavin biosynthesis protein RibD [Escherichia coli N1]
gi|408232168|gb|EKI55419.1| riboflavin biosynthesis protein RibD [Escherichia coli N1]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|375086303|ref|ZP_09732719.1| riboflavin biosynthesis protein RibD [Megamonas funiformis YIT
11815]
gi|374565708|gb|EHR36971.1| riboflavin biosynthesis protein RibD [Megamonas funiformis YIT
11815]
Length = 375
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 202/371 (54%), Gaps = 36/371 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR ++LA A+G TSPNP+VG VIVKD ++VG G+H KAG PHAEV AL AGEL
Sbjct: 12 DEKYMRLAMQLAGNAIGRTSPNPLVGAVIVKDNRVVGCGWHRKAGTPHAEVHALNQAGEL 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA YV+LEPC HYG+TPPC +AL++AKVK V G+LD NP V KG + L DAGI V
Sbjct: 72 AQGADVYVTLEPCAHYGKTPPCAKALVEAKVKNVYGGLLDVNPKVAGKGFKILEDAGIHV 131
Query: 197 TVG-VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYS 251
G ++DEL K+ NE F I KPF L+ ++++G + G+ S Y
Sbjct: 132 EYGFLQDELRKQ-NEVFFKWIEHKKPFVVLKAAMTLDGKIATATGQSKWITNETSRAYGY 190
Query: 252 QLLQEYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVI 310
+L YD I++ ++ + + + D + P RI+ S+ I + ++S+ ++
Sbjct: 191 KLRDIYDGIMVGINTVIEDNPMLTARVDGGKNPIRIVVDSSLKIDINANVVQDKSAKTIV 250
Query: 311 VFTDGEITVEPD----MGTKGIETVNL-----HQLNLKAVLDYCYSHGFCSVLVD----L 357
TD + D + + ++ + + +++++ +L+ CS+LV+ L
Sbjct: 251 ATTD---KADKDKILKLQAQNVDVIVVDKDENDKVDIEKLLNILGQQNICSILVEGGATL 307
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQP 414
G++ + + L+ K+ + P + G + P T + +L + L LK++Q
Sbjct: 308 SGSF----------VAKKLVDKVYFFIAPKIVGGKEAKTPVAGTGILNLQEALALKDIQI 357
Query: 415 KMSSQSIVLEG 425
+ + I++ G
Sbjct: 358 EKLEEDILIIG 368
>gi|416273502|ref|ZP_11643417.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella dysenteriae CDC 74-1112]
gi|320173768|gb|EFW48951.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Shigella dysenteriae CDC 74-1112]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|71906245|ref|YP_283832.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Dechloromonas
aromatica RCB]
gi|71845866|gb|AAZ45362.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dechloromonas aromatica RCB]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 140/228 (61%), Gaps = 10/228 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +TSPNP VGCV+V+DG+IVGEG+H KAG+PHAEV ALR AGE
Sbjct: 7 DHGMMARALQLAERGLWTTSPNPRVGCVLVRDGEIVGEGWHEKAGEPHAEVHALRSAGER 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+G TAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP+V+ KGL LR AGI+
Sbjct: 67 AKGTTAYVTLEPCSHHGRTPPCAEALIAAGVSRVVAAMTDPNPLVSGKGLALLRAAGIET 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLL 254
G+ + + LN F+ R+ G+P+ L+ S++G L GV++ +G +
Sbjct: 127 ASGLLENEARELNIGFVSRMTRGRPWLRLKVAASLDGKT--ALNNGVSQWITGPDARRDG 184
Query: 255 QEYDA---IILSASSTKKYSIPASQEPD---ANQPFRIITVSNHASPI 296
+ A IL+ T + P D QP R++ S +P+
Sbjct: 185 HAWRARACAILTGIGTVRDDDPQLSVRDVATTRQPLRVVVDSKLETPV 232
>gi|419954681|ref|ZP_14470817.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri TS44]
gi|387968545|gb|EIK52834.1| riboflavin biosynthesis protein RibD [Pseudomonas stutzeri TS44]
Length = 368
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV G++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DHAWMARALQLAHKGLYSTHPNPRVGCVIVAAGELVGEGWHVRAGEPHAEVHALRQAGER 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EAL++A V +VV M DPNP V +GL+ LR AGIDV
Sbjct: 65 ARGATAYVTLEPCSHHGRTPPCAEALVRAGVGRVVAAMQDPNPQVAGRGLQLLRSAGIDV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ +G PF + +S++G GE +G Q
Sbjct: 125 ASGVLEAEARELNGGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 185 LRARSSVVLTGADT 198
>gi|429083915|ref|ZP_19146941.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter condimenti 1330]
gi|426547269|emb|CCJ72982.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter condimenti 1330]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 138/229 (60%), Gaps = 18/229 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R + LA++ +T PNP VGCVIVKDG IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEFYMARALTLASQGRFTTHPNPRVGCVIVKDGTIVGEGFHYRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ + LN+ F+ R+ TG PF L+ S++G GE + Q +Q
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMANGESQWITSPQARQDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA-------------SQEPDAN--QPFRII 287
A IL+ S+T P+ +Q P N QP RI+
Sbjct: 183 LRAESHAILTTSATVLADDPSMTVRWDELDETTQAQYPHENLRQPLRIV 231
>gi|423127724|ref|ZP_17115403.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5250]
gi|376394763|gb|EHT07413.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5250]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDGKIVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARALKLAARGRFTTHPNPNVGCVIVKDGKIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ G+DV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGVDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPYIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|148826406|ref|YP_001291159.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE]
gi|229846003|ref|ZP_04466115.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1]
gi|386266318|ref|YP_005829810.1| Riboflavin biosynthesis protein RibD [Haemophilus influenzae R2846]
gi|148716566|gb|ABQ98776.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae PittEE]
gi|229811007|gb|EEP46724.1| formamidopyrimidine-DNA glycosylase [Haemophilus influenzae 7P49H1]
gi|309973554|gb|ADO96755.1| Riboflavin biosynthesis protein RibD [Haemophilus influenzae R2846]
Length = 372
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
++GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 SKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|355639264|ref|ZP_09051066.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. 2_1_26]
gi|354832119|gb|EHF16120.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. 2_1_26]
Length = 373
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ G PF ++ +S++G GE +G Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|386612608|ref|YP_006132274.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNK88]
gi|332341777|gb|AEE55111.1| riboflavin biosynthesis protein RibD [Escherichia coli UMNK88]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|424817283|ref|ZP_18242434.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia fergusonii ECD227]
gi|325498303|gb|EGC96162.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia fergusonii ECD227]
Length = 367
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|153845346|ref|ZP_01993762.1| riboflavin biosynthesis protein RibD, partial [Vibrio
parahaemolyticus AQ3810]
gi|149745121|gb|EDM56372.1| riboflavin biosynthesis protein RibD [Vibrio parahaemolyticus
AQ3810]
Length = 280
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 154/268 (57%), Gaps = 19/268 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA + + +T+PNP VGCVIV+DG IVGEG+H +AG+PHAEV A+R AG+
Sbjct: 14 DFSMMSRALKLARRGIYTTAPNPNVGCVIVRDGVIVGEGYHHRAGEPHAEVHAMRMAGDK 73
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYGRTPPC E LIKAKV +VV M DPNP V +G++ LR+AG++V
Sbjct: 74 AEGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMEDPNPKVAGRGIQMLREAGVEV 133
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + LN FI + TG PF L+ S++G G+ + Q +Q
Sbjct: 134 QVGLLENDAIELNRGFIKFMQTGMPFIQLKMAASLDGQSALSNGKSQWITSPQARQDVQC 193
Query: 257 YDAI---ILSASST----------KKYSIPASQEP-----DANQPFRIITVSNHASPIRI 298
Y A ILS S T + +P S + + QP R+I +
Sbjct: 194 YRAQSGGILSTSKTVLDDNASLNVRWDDLPQSVQAHYELTEVRQPARVILDRQQKLSDDL 253
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTK 326
S E ++IV ++G++ + D K
Sbjct: 254 KLFSTE-GERIIVSSEGDVCPQLDQSGK 280
>gi|323497966|ref|ZP_08102975.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
[Vibrio sinaloensis DSM 21326]
gi|323317011|gb|EGA70013.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
[Vibrio sinaloensis DSM 21326]
Length = 368
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 178/348 (51%), Gaps = 40/348 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA V +T+PNP VGCVI ++ ++VGEGFH +AG+PHAEV ALR AGE
Sbjct: 8 DFQMMSRAIDLAKGGVYTTAPNPNVGCVITRNEEVVGEGFHYRAGEPHAEVHALRMAGEQ 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+HYGRTPPC E LIKAKV KV+ DPNP V +G++ LRDAGI+V
Sbjct: 68 SVGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICASQDPNPQVAGRGIKMLRDAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ ++ LN FI R+ TG P+ L+ S++G G+ + Q +Q+
Sbjct: 128 EVGLLEQEALALNPGFIKRMKTGLPYVQLKMAASLDGQTALANGQSQWITSPQARQDVQQ 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRII-TVSNHASPIR 297
+ A ILS S T + +P S + D QP R+I N +P
Sbjct: 188 WRARSGAILSTSKTVIEDNASLNVRWSELPESIQQRYSQTDLRQPTRVILDRQNKLTP-- 245
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLD-YCYSHGFCSVLVD 356
+ + GE V + G + Q++L+A L H V V+
Sbjct: 246 ---------DLKLFHSPGERLVVSEHGEVAMSLNEQQQIDLEATLACLAQQHNINHVWVE 296
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L I + L+ ++++ P GSD LL +LG
Sbjct: 297 AGAT------LASSLIREQLVDELILYFAPKLMGSDS---RGLLGALG 335
>gi|297538271|ref|YP_003674040.1| riboflavin biosynthesis protein RibD [Methylotenera versatilis 301]
gi|297257618|gb|ADI29463.1| riboflavin biosynthesis protein RibD [Methylotenera versatilis 301]
Length = 370
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/243 (44%), Positives = 146/243 (60%), Gaps = 8/243 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM + LA + + +T PNP VGCVIVK+ +IVG+G H KAG+PHAEVFALR+AG
Sbjct: 6 DHTYMTLALRLAERGLYTTQPNPRVGCVIVKNNQIVGQGAHLKAGEPHAEVFALREAGAN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGA AYV+LEPCNH+GRTPPC +ALI A+VK+VVV M DPNP+V G++RL+ GI+V
Sbjct: 66 AEGADAYVTLEPCNHHGRTPPCVDALINARVKRVVVAMQDPNPLVAGNGIKRLQAHGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + K LN FI R+ + P+ + S++G G+ + +G +Q
Sbjct: 126 EVGLMEAESKSLNLGFISRMTSALPYVRCKVAASLDGRTALNNGKSLWITGEPARLDVQH 185
Query: 257 YD----AIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEE--SSSK 308
+ AI+ + T S+ E QP R+I SN +P L+ E S S
Sbjct: 186 WRAQSCAIVTGIGTVLTDNPSMNVRLENTGRQPLRVIVDSNLQTPTDCKMLNPELLSLSP 245
Query: 309 VIV 311
V+V
Sbjct: 246 VLV 248
>gi|253998546|ref|YP_003050609.1| riboflavin biosynthesis protein RibD [Methylovorus glucosetrophus
SIP3-4]
gi|253985225|gb|ACT50082.1| riboflavin biosynthesis protein RibD [Methylovorus glucosetrophus
SIP3-4]
Length = 368
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 166/295 (56%), Gaps = 19/295 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCVIVKDG+IVGEG H KAG+PHAEV ALR AG L
Sbjct: 6 DHQMMARALRLAEQGLYTTTPNPRVGCVIVKDGQIVGEGAHLKAGEPHAEVHALRQAGNL 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA AYV+LEPC+H+GRTPPC +ALIKA VK+VV M DPNP V GL+RL+ GI V
Sbjct: 66 AQGADAYVTLEPCSHHGRTPPCADALIKAGVKRVVAAMQDPNPQVAGSGLQRLQAQGIAV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + + LN FI R+ +PF + S++G Q G +G + +Q
Sbjct: 126 QSGLLEAQARSLNAGFISRMTRRRPFVRSKIAASLDGATALQNGISQWITGPEARKDVQH 185
Query: 257 YDA---IILSASSTKKYSIPA------SQEPDANQPFRIITVSN-HASP-IRIPGLSEES 305
+ A ++L+ T P + E QP R+I S+ SP RI +
Sbjct: 186 WRAQSCVMLTGIGTVLADDPQLSVRDEAGELQGRQPLRVIVDSHLQISPQARI----LQG 241
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNL--HQ--LNLKAVLDYCYSHGFCSVLVD 356
+ +IV+ + G+E ++L HQ ++L ++L+ S G V+V+
Sbjct: 242 GNALIVYGSASADRIAALCQHGVELMHLPDHQSRVSLDSLLELLASRGINEVMVE 296
>gi|415836258|ref|ZP_11518670.1| riboflavin biosynthesis protein RibD [Escherichia coli RN587/1]
gi|417284187|ref|ZP_12071482.1| riboflavin biosynthesis protein RibD [Escherichia coli 3003]
gi|323191332|gb|EFZ76595.1| riboflavin biosynthesis protein RibD [Escherichia coli RN587/1]
gi|386242396|gb|EII84131.1| riboflavin biosynthesis protein RibD [Escherichia coli 3003]
Length = 367
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMTSGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|431928637|ref|YP_007241671.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pseudomonas
stutzeri RCH2]
gi|431826924|gb|AGA88041.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
stutzeri RCH2]
Length = 366
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA K + ST PNP VGCVIV G++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DHAWMARALQLARKGLYSTHPNPRVGCVIVAAGELVGEGWHVRAGEPHAEVHALRQAGER 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC EAL+KA V +VV M DPNP V +GL+ LR AGI+V
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGRGLQLLRSAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + +N FI R+ +G PF + +S++G GE +G Q
Sbjct: 124 VSGVLEAEAREINCGFIKRMESGLPFVRAKLAMSLDGRTAMASGESQWITGPAARAEVQR 183
Query: 254 LQEYDAIILSASST 267
L+ +++L+ + T
Sbjct: 184 LRARSSVVLTGADT 197
>gi|229843994|ref|ZP_04464135.1| hypothetical protein CGSHi6P18H1_06131 [Haemophilus influenzae
6P18H1]
gi|229812988|gb|EEP48676.1| hypothetical protein CGSHi6P18H1_06131 [Haemophilus influenzae
6P18H1]
Length = 372
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA AYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGAIAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGSDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATIIADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|191166718|ref|ZP_03028545.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A]
gi|309794861|ref|ZP_07689282.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7]
gi|416341355|ref|ZP_11675978.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Escherichia coli EC4100B]
gi|417223910|ref|ZP_12027201.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.154]
gi|417600691|ref|ZP_12251276.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_94C]
gi|425421023|ref|ZP_18802254.1| riboflavin biosynthesis protein RibD [Escherichia coli 0.1288]
gi|432812523|ref|ZP_20046372.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE101]
gi|190903229|gb|EDV62951.1| riboflavin biosynthesis protein RibD [Escherichia coli B7A]
gi|308121514|gb|EFO58776.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 145-7]
gi|320201655|gb|EFW76231.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-5-phosphoribosylaminouracil
reductase [Escherichia coli EC4100B]
gi|345354036|gb|EGW86263.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_94C]
gi|386198958|gb|EIH97949.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.154]
gi|408347885|gb|EKJ62028.1| riboflavin biosynthesis protein RibD [Escherichia coli 0.1288]
gi|431357415|gb|ELG44082.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE101]
Length = 367
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|432459384|ref|ZP_19701548.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE204]
gi|433066621|ref|ZP_20253465.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE128]
gi|430992468|gb|ELD08839.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE204]
gi|431591156|gb|ELI62156.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE128]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|331676081|ref|ZP_08376793.1| riboflavin biosynthesis protein RibD [Escherichia coli H591]
gi|331076139|gb|EGI47421.1| riboflavin biosynthesis protein RibD [Escherichia coli H591]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|417230354|ref|ZP_12031940.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0959]
gi|386206844|gb|EII11350.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0959]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|419373879|ref|ZP_13914935.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14B]
gi|378226293|gb|EHX86480.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14B]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 119/165 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGE 167
>gi|157159935|ref|YP_001457253.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli HS]
gi|419353393|ref|ZP_13894679.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13C]
gi|419358737|ref|ZP_13899968.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13D]
gi|419363651|ref|ZP_13904833.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13E]
gi|157065615|gb|ABV04870.1| riboflavin biosynthesis protein RibD [Escherichia coli HS]
gi|378208302|gb|EHX68686.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13D]
gi|378209310|gb|EHX69684.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13C]
gi|378219671|gb|EHX79938.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13E]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|296387387|ref|ZP_06876886.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PAb1]
Length = 373
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+VKDG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGEN 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ G PF ++ +S++G GE +G Q
Sbjct: 125 QSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|193068693|ref|ZP_03049654.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019]
gi|209917627|ref|YP_002291711.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli SE11]
gi|218552977|ref|YP_002385890.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli IAI1]
gi|260853634|ref|YP_003227525.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. 11368]
gi|260866572|ref|YP_003232974.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O111:H- str. 11128]
gi|293418481|ref|ZP_06660916.1| riboflavin biosynthesis protein RibD [Escherichia coli B088]
gi|300820347|ref|ZP_07100499.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7]
gi|300903321|ref|ZP_07121249.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1]
gi|301301562|ref|ZP_07207697.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1]
gi|331666763|ref|ZP_08367637.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271]
gi|415793719|ref|ZP_11496263.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa14]
gi|415828345|ref|ZP_11514942.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1357]
gi|415862689|ref|ZP_11536129.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 85-1]
gi|417135393|ref|ZP_11980178.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0588]
gi|417190625|ref|ZP_12013221.1| riboflavin biosynthesis protein RibD [Escherichia coli 4.0522]
gi|417218265|ref|ZP_12023867.1| riboflavin biosynthesis protein RibD [Escherichia coli JB1-95]
gi|417268198|ref|ZP_12055559.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.3884]
gi|417299421|ref|ZP_12086651.1| riboflavin biosynthesis protein RibD [Escherichia coli 900105
(10e)]
gi|417590091|ref|ZP_12240811.1| riboflavin biosynthesis protein RibD [Escherichia coli 2534-86]
gi|417595333|ref|ZP_12246003.1| riboflavin biosynthesis protein RibD [Escherichia coli 3030-1]
gi|417606401|ref|ZP_12256930.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_DG131-3]
gi|418941163|ref|ZP_13494500.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O157:H43 str. T22]
gi|419168408|ref|ZP_13712806.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7A]
gi|419179402|ref|ZP_13723027.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7C]
gi|419184959|ref|ZP_13728481.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7D]
gi|419190207|ref|ZP_13733675.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7E]
gi|419195506|ref|ZP_13738914.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8A]
gi|419201533|ref|ZP_13744761.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8B]
gi|419207409|ref|ZP_13750537.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8C]
gi|419213849|ref|ZP_13756881.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8D]
gi|419219674|ref|ZP_13762631.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8E]
gi|419225134|ref|ZP_13768024.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9A]
gi|419230923|ref|ZP_13773715.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9B]
gi|419236256|ref|ZP_13779007.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9C]
gi|419241849|ref|ZP_13784499.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9D]
gi|419247255|ref|ZP_13789871.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9E]
gi|419253035|ref|ZP_13795585.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10A]
gi|419259044|ref|ZP_13801504.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10B]
gi|419265044|ref|ZP_13807431.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10C]
gi|419270732|ref|ZP_13813065.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10D]
gi|419276531|ref|ZP_13818801.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10E]
gi|419282132|ref|ZP_13824354.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10F]
gi|419368696|ref|ZP_13909825.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14A]
gi|419389827|ref|ZP_13930666.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15A]
gi|419394999|ref|ZP_13935784.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15B]
gi|419400350|ref|ZP_13941084.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15C]
gi|419405521|ref|ZP_13946225.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15D]
gi|419876942|ref|ZP_14398601.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9534]
gi|419882631|ref|ZP_14403841.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9545]
gi|419888469|ref|ZP_14408976.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9570]
gi|419893064|ref|ZP_14413070.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9574]
gi|419900620|ref|ZP_14420046.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9942]
gi|419908313|ref|ZP_14427047.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O26:H11 str. CVM10026]
gi|420088229|ref|ZP_14600133.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9602]
gi|420092961|ref|ZP_14604651.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9634]
gi|420103091|ref|ZP_14614005.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9455]
gi|420109720|ref|ZP_14619820.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9553]
gi|420113401|ref|ZP_14623144.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10021]
gi|420119613|ref|ZP_14628878.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10030]
gi|420125690|ref|ZP_14634481.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10224]
gi|420130801|ref|ZP_14639281.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9952]
gi|420384051|ref|ZP_14883439.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa12]
gi|422355359|ref|ZP_16436075.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 117-3]
gi|422777107|ref|ZP_16830760.1| riboflavin biosynthesis protein RibD [Escherichia coli H120]
gi|423710182|ref|ZP_17684532.1| riboflavin biosynthesis protein RibD [Escherichia coli B799]
gi|424747956|ref|ZP_18176108.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424766711|ref|ZP_18194056.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424768129|ref|ZP_18195421.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CFSAN001632]
gi|425377229|ref|ZP_18761631.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1865]
gi|427803480|ref|ZP_18970547.1| bifunctional pyrimidine deaminase/reductase [Escherichia coli
chi7122]
gi|427808098|ref|ZP_18975163.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Escherichia coli]
gi|432375494|ref|ZP_19618508.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE12]
gi|432479775|ref|ZP_19721740.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE210]
gi|432678003|ref|ZP_19913430.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE142]
gi|432763702|ref|ZP_19998154.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE48]
gi|432830399|ref|ZP_20064008.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE135]
gi|432833467|ref|ZP_20067015.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE136]
gi|432966521|ref|ZP_20155441.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE203]
gi|433090735|ref|ZP_20277043.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE138]
gi|433128742|ref|ZP_20314222.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE163]
gi|433133562|ref|ZP_20318945.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE166]
gi|443616439|ref|YP_007380295.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli APEC O78]
gi|192958056|gb|EDV88498.1| riboflavin biosynthesis protein RibD [Escherichia coli E110019]
gi|209910886|dbj|BAG75960.1| pyrimidine deaminase/reductase [Escherichia coli SE11]
gi|218359745|emb|CAQ97286.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli IAI1]
gi|257752283|dbj|BAI23785.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O26:H11 str. 11368]
gi|257762928|dbj|BAI34423.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O111:H- str. 11128]
gi|291325009|gb|EFE64424.1| riboflavin biosynthesis protein RibD [Escherichia coli B088]
gi|300404616|gb|EFJ88154.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 84-1]
gi|300527132|gb|EFK48201.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 119-7]
gi|300843059|gb|EFK70819.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 124-1]
gi|315256239|gb|EFU36207.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 85-1]
gi|323152118|gb|EFZ38411.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa14]
gi|323184760|gb|EFZ70131.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1357]
gi|323945315|gb|EGB41371.1| riboflavin biosynthesis protein RibD [Escherichia coli H120]
gi|324016680|gb|EGB85899.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 117-3]
gi|331065987|gb|EGI37871.1| riboflavin biosynthesis protein RibD [Escherichia coli TA271]
gi|345345264|gb|EGW77610.1| riboflavin biosynthesis protein RibD [Escherichia coli 2534-86]
gi|345361701|gb|EGW93859.1| riboflavin biosynthesis protein RibD [Escherichia coli 3030-1]
gi|345365615|gb|EGW97722.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_DG131-3]
gi|375323522|gb|EHS69230.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O157:H43 str. T22]
gi|378018814|gb|EHV81660.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7A]
gi|378027863|gb|EHV90488.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7C]
gi|378032377|gb|EHV94958.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7D]
gi|378042310|gb|EHW04759.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC7E]
gi|378052727|gb|EHW15029.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8A]
gi|378057127|gb|EHW19362.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8B]
gi|378063065|gb|EHW25235.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8C]
gi|378069160|gb|EHW31255.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8D]
gi|378072728|gb|EHW34785.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC8E]
gi|378081836|gb|EHW43784.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9A]
gi|378082751|gb|EHW44694.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9B]
gi|378090478|gb|EHW52315.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9C]
gi|378095172|gb|EHW56962.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9D]
gi|378102736|gb|EHW64409.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC9E]
gi|378107871|gb|EHW69489.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10A]
gi|378116893|gb|EHW78411.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10B]
gi|378119279|gb|EHW80774.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10C]
gi|378121677|gb|EHW83128.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10D]
gi|378134720|gb|EHW96041.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10E]
gi|378139955|gb|EHX01185.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC10F]
gi|378221902|gb|EHX82144.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14A]
gi|378244629|gb|EHY04571.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15A]
gi|378251851|gb|EHY11747.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15B]
gi|378252181|gb|EHY12075.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15C]
gi|378257910|gb|EHY17746.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC15D]
gi|385704830|gb|EIG41902.1| riboflavin biosynthesis protein RibD [Escherichia coli B799]
gi|386153247|gb|EIH04536.1| riboflavin biosynthesis protein RibD [Escherichia coli 5.0588]
gi|386191597|gb|EIH80338.1| riboflavin biosynthesis protein RibD [Escherichia coli 4.0522]
gi|386193148|gb|EIH87447.1| riboflavin biosynthesis protein RibD [Escherichia coli JB1-95]
gi|386230556|gb|EII57911.1| riboflavin biosynthesis protein RibD [Escherichia coli 3.3884]
gi|386257213|gb|EIJ12704.1| riboflavin biosynthesis protein RibD [Escherichia coli 900105
(10e)]
gi|388341925|gb|EIL08002.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9534]
gi|388360339|gb|EIL24560.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9570]
gi|388361261|gb|EIL25395.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9545]
gi|388368648|gb|EIL32273.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9574]
gi|388375267|gb|EIL38293.1| fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli O26:H11 str. CVM10026]
gi|388377661|gb|EIL40456.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9942]
gi|391309560|gb|EIQ67228.1| riboflavin biosynthesis protein RibD [Escherichia coli EPECa12]
gi|394390740|gb|EJE67700.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9602]
gi|394394587|gb|EJE71150.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10224]
gi|394399966|gb|EJE75927.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CVM9634]
gi|394405910|gb|EJE81007.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9553]
gi|394409081|gb|EJE83668.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CVM9455]
gi|394412020|gb|EJE86200.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10021]
gi|394431075|gb|EJF03318.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM10030]
gi|394433338|gb|EJF05370.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CVM9952]
gi|408310063|gb|EKJ27147.1| riboflavin biosynthesis protein RibD [Escherichia coli EC1865]
gi|412961662|emb|CCK45569.1| bifunctional pyrimidine deaminase/reductase [Escherichia coli
chi7122]
gi|412968277|emb|CCJ42894.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Escherichia coli]
gi|421934177|gb|EKT91954.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H11 str. CFSAN001630]
gi|421945345|gb|EKU02562.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421946767|gb|EKU03881.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O111:H8 str. CFSAN001632]
gi|430901398|gb|ELC23366.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE12]
gi|431010792|gb|ELD25136.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE210]
gi|431207639|gb|ELF05893.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE142]
gi|431313354|gb|ELG01327.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE48]
gi|431380161|gb|ELG65061.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE135]
gi|431388629|gb|ELG72352.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE136]
gi|431475882|gb|ELH55686.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE203]
gi|431615187|gb|ELI84317.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE138]
gi|431651612|gb|ELJ18851.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE163]
gi|431663377|gb|ELJ30139.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE166]
gi|443420947|gb|AGC85851.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli APEC O78]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|432748867|ref|ZP_19983490.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE29]
gi|431300605|gb|ELF90156.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE29]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|228916001|ref|ZP_04079574.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228843596|gb|EEM88672.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 350
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 175/308 (56%), Gaps = 25/308 (8%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G T YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQARGGTIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIQILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + L + E+ Q+ E AI++ A++ +
Sbjct: 123 NKYILTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIVFTDGEITVEP-- 321
K + P+ ++ P+ P RII S +RIP + + + +FT E
Sbjct: 183 KDN-PSLTTRIPNGRNPIRIIL----DSTLRIPMEANIVTDGEAPTWIFTTSNHAGEKKK 237
Query: 322 ---DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQ 378
+ G K T +NL +LD G S+L++ G IE L+
Sbjct: 238 ALENAGVKVFVTSGEKHINLYEMLDVLGEKGVSSLLIEGGGEVN------ASFIENELMD 291
Query: 379 KIVVEVLP 386
K+++ P
Sbjct: 292 KLILYFAP 299
>gi|145640611|ref|ZP_01796194.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae R3021]
gi|145274537|gb|EDK14400.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
22.4-21]
Length = 250
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
++GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 SKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|257483265|ref|ZP_05637306.1| riboflavin biosynthesis protein RibD, partial [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 167
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 116/157 (73%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGEL
Sbjct: 9 DVHYMARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQAGEL 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V
Sbjct: 69 ARGATAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPEVSGRGLLRLMNAGIGV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
GV + + LN+ F+ R+ TG+P+ ++ +S++G
Sbjct: 129 QCGVLESEARALNKGFLKRMETGQPYIRVKMAMSLDG 165
>gi|331681807|ref|ZP_08382440.1| riboflavin biosynthesis protein RibD [Escherichia coli H299]
gi|450185624|ref|ZP_21889186.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli SEPT362]
gi|331081009|gb|EGI52174.1| riboflavin biosynthesis protein RibD [Escherichia coli H299]
gi|449325068|gb|EMD14986.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli SEPT362]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARLDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|170756114|ref|YP_001782503.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str.
Okra]
gi|429246391|ref|ZP_19209714.1| riboflavin biosynthesis protein RibD [Clostridium botulinum
CFSAN001628]
gi|169121326|gb|ACA45162.1| riboflavin biosynthesis protein RibD [Clostridium botulinum B1 str.
Okra]
gi|428756582|gb|EKX79131.1| riboflavin biosynthesis protein RibD [Clostridium botulinum
CFSAN001628]
Length = 365
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 199/376 (52%), Gaps = 36/376 (9%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D F+M + ++LA + G +PNP VG ++VK+ KI+GEG+H G PHAEV+ALR+AG
Sbjct: 2 EDYNFHMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E+++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+V G+ ++ K+LNE FI I KPF L+ +++G + + GE E Y
Sbjct: 122 EVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATRTGESKWITGEEARYKV 181
Query: 252 QLLQEYDAIILSASST--KKYSIPASQEPDANQPFRIITVSNHASPIRIP---GLSEESS 306
Q ++ + I+ T K + ++ P II SN +RIP + E +
Sbjct: 182 QQIRNDLSGIMVGIDTVIKDNPLLTTRIEGGRSPKAIIVDSN----LRIPLESKILETFN 237
Query: 307 SKVIVFTDGEITVEP-------DMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDL 357
+ I + P ++G K +E + + L ++ Y S G S+L L
Sbjct: 238 KRAIYIAATKKHKNPSKKNALENLGAKVLEFEENEEGKVPLNELMQYLVSEGVDSIL--L 295
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKN 411
G LKEGI + K++ + P + G D GGN + SL L+N
Sbjct: 296 EGGSTLNFSALKEGI----VDKVMCFIAPKIMGGQDSKNMIGGNG---VESLKDIFKLEN 348
Query: 412 LQPKMSSQSIVLEGYL 427
L+ + Q I++EGY+
Sbjct: 349 LKFEKIGQDILIEGYV 364
>gi|419805599|ref|ZP_14330731.1| riboflavin biosynthesis protein RibD [Escherichia coli AI27]
gi|384471421|gb|EIE55500.1| riboflavin biosynthesis protein RibD [Escherichia coli AI27]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|238765182|ref|ZP_04626114.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
kristensenii ATCC 33638]
gi|238696616|gb|EEP89401.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia
kristensenii ATCC 33638]
Length = 369
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 143/238 (60%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA +TSPNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DEFYMARAFELARLGRFTTSPNPNVGCVVVRDGEIVGEGYHLRAGEPHAEVHALRMAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A VK+VV M DPNP V +GL +L+ AG++V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALLTAGVKRVVAAMQDPNPQVAGRGLYKLKQAGVEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 DHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 YDA---IILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
+ A ILS S+T P+ QE DA+ QP R+I S N +P
Sbjct: 184 FRAQSSAILSTSATVLADDPSLTVRWQELDADTQARYPQDTLRQPVRVIVDSHNRVTP 241
>gi|218703696|ref|YP_002411215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli UMN026]
gi|293403533|ref|ZP_06647624.1| ribD [Escherichia coli FVEC1412]
gi|298379145|ref|ZP_06989026.1| ribD [Escherichia coli FVEC1302]
gi|300900480|ref|ZP_07118647.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1]
gi|417585207|ref|ZP_12235987.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_C165-02]
gi|432352076|ref|ZP_19595385.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE2]
gi|432400524|ref|ZP_19643284.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE26]
gi|432474433|ref|ZP_19716446.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE208]
gi|432492709|ref|ZP_19734548.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE213]
gi|432521050|ref|ZP_19758215.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE228]
gi|432541267|ref|ZP_19778142.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE235]
gi|432629983|ref|ZP_19865933.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE80]
gi|432664601|ref|ZP_19900197.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE116]
gi|432773593|ref|ZP_20007883.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE54]
gi|432837962|ref|ZP_20071455.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE140]
gi|432884379|ref|ZP_20099335.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE158]
gi|432910099|ref|ZP_20117226.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE190]
gi|433017369|ref|ZP_20205640.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE105]
gi|433051712|ref|ZP_20238950.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE122]
gi|433157356|ref|ZP_20342232.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE177]
gi|433201834|ref|ZP_20385646.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE95]
gi|218430793|emb|CAR11667.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli UMN026]
gi|291429386|gb|EFF02406.1| ribD [Escherichia coli FVEC1412]
gi|298280258|gb|EFI21762.1| ribD [Escherichia coli FVEC1302]
gi|300355961|gb|EFJ71831.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 198-1]
gi|345341432|gb|EGW73837.1| riboflavin biosynthesis protein RibD [Escherichia coli
STEC_C165-02]
gi|430880709|gb|ELC03984.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE2]
gi|430929244|gb|ELC49755.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE26]
gi|431010373|gb|ELD24721.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE208]
gi|431013115|gb|ELD26849.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE213]
gi|431045604|gb|ELD55834.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE228]
gi|431064521|gb|ELD73388.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE235]
gi|431174502|gb|ELE74547.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE80]
gi|431204669|gb|ELF03227.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE116]
gi|431320714|gb|ELG08344.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE54]
gi|431391865|gb|ELG75469.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE140]
gi|431419967|gb|ELH02301.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE158]
gi|431447174|gb|ELH27916.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE190]
gi|431537539|gb|ELI13656.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE105]
gi|431575847|gb|ELI48570.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE122]
gi|431682042|gb|ELJ47811.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE177]
gi|431726350|gb|ELJ90160.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE95]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|307312211|ref|ZP_07591847.1| riboflavin biosynthesis protein RibD [Escherichia coli W]
gi|378714182|ref|YP_005279075.1| riboflavin biosynthesis protein RibD [Escherichia coli KO11FL]
gi|386607774|ref|YP_006123260.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Escherichia coli W]
gi|422763205|ref|ZP_16816960.1| riboflavin biosynthesis protein RibD [Escherichia coli E1167]
gi|306907713|gb|EFN38215.1| riboflavin biosynthesis protein RibD [Escherichia coli W]
gi|315059691|gb|ADT74018.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli W]
gi|323379743|gb|ADX52011.1| riboflavin biosynthesis protein RibD [Escherichia coli KO11FL]
gi|324116898|gb|EGC10811.1| riboflavin biosynthesis protein RibD [Escherichia coli E1167]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|218693874|ref|YP_002401541.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 55989]
gi|407467860|ref|YP_006785698.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407483409|ref|YP_006780558.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483963|ref|YP_006771509.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417153085|ref|ZP_11991876.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0497]
gi|417579634|ref|ZP_12230456.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_B2F1]
gi|417665496|ref|ZP_12315063.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_O31]
gi|417803766|ref|ZP_12450801.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. LB226692]
gi|417831518|ref|ZP_12478040.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 01-09591]
gi|417867715|ref|ZP_12512750.1| hypothetical protein C22711_4641 [Escherichia coli O104:H4 str.
C227-11]
gi|422991127|ref|ZP_16981898.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C227-11]
gi|422993066|ref|ZP_16983830.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C236-11]
gi|422998277|ref|ZP_16989033.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
09-7901]
gi|423006738|ref|ZP_16997481.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
04-8351]
gi|423008381|ref|ZP_16999119.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-3677]
gi|423022568|ref|ZP_17013271.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4404]
gi|423027722|ref|ZP_17018415.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4522]
gi|423033559|ref|ZP_17024243.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4623]
gi|423036425|ref|ZP_17027099.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423041545|ref|ZP_17032212.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423048231|ref|ZP_17038888.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423051815|ref|ZP_17040623.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423058780|ref|ZP_17047576.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|429722607|ref|ZP_19257505.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429774704|ref|ZP_19306707.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02030]
gi|429779967|ref|ZP_19311920.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429784019|ref|ZP_19315932.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02092]
gi|429789357|ref|ZP_19321232.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02093]
gi|429795587|ref|ZP_19327413.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02281]
gi|429801513|ref|ZP_19333291.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02318]
gi|429805145|ref|ZP_19336892.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02913]
gi|429809956|ref|ZP_19341658.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03439]
gi|429815716|ref|ZP_19347375.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-04080]
gi|429821304|ref|ZP_19352917.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03943]
gi|429906978|ref|ZP_19372947.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429911176|ref|ZP_19377132.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917012|ref|ZP_19382952.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922050|ref|ZP_19387971.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927868|ref|ZP_19393774.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429931800|ref|ZP_19397695.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429933402|ref|ZP_19399292.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939056|ref|ZP_19404930.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429946699|ref|ZP_19412554.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429949331|ref|ZP_19415179.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429957615|ref|ZP_19423444.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|218350606|emb|CAU96298.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia coli 55989]
gi|340735670|gb|EGR64726.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 01-09591]
gi|340741475|gb|EGR75621.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. LB226692]
gi|341921004|gb|EGT70608.1| hypothetical protein C22711_4641 [Escherichia coli O104:H4 str.
C227-11]
gi|345344054|gb|EGW76430.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_B2F1]
gi|354858237|gb|EHF18688.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
04-8351]
gi|354860113|gb|EHF20560.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C227-11]
gi|354866809|gb|EHF27232.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
C236-11]
gi|354877145|gb|EHF37505.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
09-7901]
gi|354879452|gb|EHF39790.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4404]
gi|354884039|gb|EHF44353.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-3677]
gi|354885840|gb|EHF46132.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4522]
gi|354888907|gb|EHF49161.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4623]
gi|354901508|gb|EHF61635.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354905739|gb|EHF65822.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354908246|gb|EHF68302.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354918718|gb|EHF78674.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354922406|gb|EHF82321.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-4632 C4]
gi|386169809|gb|EIH36317.1| riboflavin biosynthesis protein RibD [Escherichia coli 96.0497]
gi|397786893|gb|EJK97724.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_O31]
gi|406779125|gb|AFS58549.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407055706|gb|AFS75757.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063895|gb|AFS84942.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429351520|gb|EKY88240.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02030]
gi|429352223|gb|EKY88939.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02033-1]
gi|429352981|gb|EKY89690.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02092]
gi|429366894|gb|EKZ03495.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02093]
gi|429367805|gb|EKZ04397.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02281]
gi|429370300|gb|EKZ06866.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02318]
gi|429382687|gb|EKZ19151.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-02913]
gi|429384920|gb|EKZ21374.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03943]
gi|429385443|gb|EKZ21896.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-03439]
gi|429397136|gb|EKZ33483.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
11-04080]
gi|429399364|gb|EKZ35685.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429399672|gb|EKZ35992.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429410426|gb|EKZ46648.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429412326|gb|EKZ48523.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429419311|gb|EKZ55449.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429427870|gb|EKZ63950.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429434714|gb|EKZ70738.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429435538|gb|EKZ71556.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429440079|gb|EKZ76058.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429444679|gb|EKZ80624.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429450984|gb|EKZ86876.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429456476|gb|EKZ92321.1| riboflavin biosynthesis protein RibD [Escherichia coli O104:H4 str.
Ec11-9941]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|229174066|ref|ZP_04301602.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
gi|228609398|gb|EEK66684.1| Riboflavin biosynthesis protein [Bacillus cereus MM3]
Length = 350
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 174/308 (56%), Gaps = 25/308 (8%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G T YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQARGGTIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGSGIKILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + L + E+ Q+ E AI++ A++ +
Sbjct: 123 NKYIMTKRPFVTIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRIITVSNHASPIRIP---GLSEESSSKVIVFTDGEITVEP-- 321
K + P+ ++ P+ P R+I S +RIP + + + +FT E
Sbjct: 183 KDN-PSLTTRIPNGRNPIRVIL----DSTLRIPMEANVVADREAPTWIFTTSNYAAEKRK 237
Query: 322 ---DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQ 378
+ G K T +NL +LD G S+L++ G IE L+
Sbjct: 238 ALENAGVKVFVTSGEKHINLYEMLDVLGRKGVSSLLIEGGGEVN------ASFIENKLMD 291
Query: 379 KIVVEVLP 386
K+++ P
Sbjct: 292 KLILYFAP 299
>gi|157156281|ref|YP_001461596.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli E24377A]
gi|157078311|gb|ABV18019.1| riboflavin biosynthesis protein RibD [Escherichia coli E24377A]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 119/165 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGE 167
>gi|417168693|ref|ZP_12001144.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.0741]
gi|386170741|gb|EIH42794.1| riboflavin biosynthesis protein RibD [Escherichia coli 99.0741]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|294667125|ref|ZP_06732350.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292603135|gb|EFF46561.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 369
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 111/166 (66%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V +VV M DP P VN G LR+AGID
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGFALLREAGID 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V GV + LN F+ R+ G+P+ ++ S++G GE
Sbjct: 131 VLSGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGE 176
>gi|114046668|ref|YP_737218.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. MR-7]
gi|113888110|gb|ABI42161.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella sp. MR-7]
Length = 381
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 120/174 (68%), Gaps = 2/174 (1%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N + D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR
Sbjct: 2 NWSELDNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALR 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGELA GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRD
Sbjct: 62 MAGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRD 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE 245
AGI V VG+ + LN F+ R+ +G P+ T++ S++G L GV++
Sbjct: 122 AGIQVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKT--ALSNGVSK 173
>gi|313675594|ref|YP_004053590.1| riboflavin biosynthesis protein ribd [Marivirga tractuosa DSM 4126]
gi|312942292|gb|ADR21482.1| riboflavin biosynthesis protein RibD [Marivirga tractuosa DSM 4126]
Length = 359
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 169/291 (58%), Gaps = 16/291 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D +M+R ++LA + SPNPMVGCVIV DGK++GEG+H KAG+PHAEV A+R
Sbjct: 12 KQDELFMQRALQLAGYGKATASPNPMVGCVIVLDGKVIGEGWHKKAGEPHAEVMAIRSVE 71
Query: 135 --ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
EL + +TAYV+LEPC HYG+TPPC E L++ ++KKVV+G +DPNP+V KG++ L+ A
Sbjct: 72 NPELLKSSTAYVTLEPCAHYGKTPPCAELLVEKQLKKVVIGAVDPNPLVAGKGIQILKKA 131
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ 252
GI+V V ++ C +N+AF + +P+ L++ + +G + + + S Q
Sbjct: 132 GIEVESAVLEQECLEVNKAFFTYMQKKRPYIILKWAQTSDGFIARENFDSKWISNPLSRQ 191
Query: 253 LLQEY----DAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
++ ++ DAI++ +T KY P +++ P R++ +H + +
Sbjct: 192 IVHKWRTETDAILI-GKNTAKYDDPQLTARDWSGKNPIRLVI--DHDLTLGNDLKIFDGE 248
Query: 307 SKVIVFTDGEITVEPDMGTKGIETVNLHQLN-LKAVLDYCYSHGFCSVLVD 356
K I F + +E KGI + L + + L+ +L+Y + SVL++
Sbjct: 249 QKTIFFHSQDQKIE----RKGIAAIKLSKEDFLRDMLNYLHQEKIQSVLIE 295
>gi|385787545|ref|YP_005818654.1| Riboflavin biosynthesis protein RibD [Erwinia sp. Ejp617]
gi|310766817|gb|ADP11767.1| Riboflavin biosynthesis protein RibD [Erwinia sp. Ejp617]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 131/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+H+GRTPPC EALI A +K+VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 SLGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ + ILS S+T PA
Sbjct: 183 LRAQSSAILSTSATVLADNPA 203
>gi|451967049|ref|ZP_21920296.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Edwardsiella tarda NBRC 105688]
gi|451314202|dbj|GAC65658.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Edwardsiella tarda NBRC 105688]
Length = 371
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FY+ R ELA + +T+PNP VGCV+V+DG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 7 DEFYLARAFELARRGRFTTTPNPNVGCVLVRDGQIVGEGFHLRAGEPHAEVHALRMAGER 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 67 ARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGLYRLQQAGIEV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N+ F+ R+ TG P+ L+ S++G GE + +Q
Sbjct: 127 RHGLMLAEAEAVNKGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSAAARADVQR 186
Query: 257 YDA---IILSASST 267
Y A ILS+S+T
Sbjct: 187 YRAQSSAILSSSAT 200
>gi|398879882|ref|ZP_10634963.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM67]
gi|398195200|gb|EJM82251.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM67]
Length = 377
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCVIVKDG+IVGEG+H + G+PHAEV ALR AGE
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVIVKDGQIVGEGWHERTGEPHAEVHALRAAGEK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A + +VV M DPNP V +G++RL AGI +
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGLARVVAAMQDPNPSVAGRGMQRLAQAGIAI 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|126030525|pdb|2G6V|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli
gi|126030526|pdb|2G6V|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli
gi|134105114|pdb|2OBC|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With A Substrate Analogue, Ribose 5-Phosphate
(Beta Form), Bound To The Active Site Of The Reductase
Domain
gi|134105115|pdb|2OBC|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With A Substrate Analogue, Ribose 5-Phosphate
(Beta Form), Bound To The Active Site Of The Reductase
Domain
Length = 402
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +Y R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 30 DEYYXARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRXAGEK 89
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV DPNP V +GL RL+ AGIDV
Sbjct: 90 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGLYRLQQAGIDV 149
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R TG P+ L+ S++G GE + QL
Sbjct: 150 SHGLXXSEAEQLNKGFLKRXRTGFPYIQLKLGASLDGRTAXASGESQWITSPQARRDVQL 209
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 210 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 268
>gi|417144568|ref|ZP_11986374.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2264]
gi|386164451|gb|EIH26237.1| riboflavin biosynthesis protein RibD [Escherichia coli 1.2264]
Length = 367
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 119/165 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGE 167
>gi|113969440|ref|YP_733233.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella sp. MR-4]
gi|113884124|gb|ABI38176.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella sp. MR-4]
Length = 381
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 120/174 (68%), Gaps = 2/174 (1%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
N + D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR
Sbjct: 2 NWSELDNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALR 61
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AGELA GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRD
Sbjct: 62 MAGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRD 121
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE 245
AGI V VG+ + LN F+ R+ +G P+ T++ S++G L GV++
Sbjct: 122 AGIQVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKT--ALSNGVSK 173
>gi|238918989|ref|YP_002932503.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella
ictaluri 93-146]
gi|238868557|gb|ACR68268.1| riboflavin biosynthesis protein RibD, putative [Edwardsiella
ictaluri 93-146]
Length = 373
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 140/238 (58%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA + +T+PNP VGCV+V+D +IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 9 DEFYMARAFELARRGRFTTTPNPNVGCVLVRDDRIVGEGFHLRAGEPHAEVLALRMAGEQ 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 69 ARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPHVAGRGLYRLQQAGIAV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N+ F+ R+ TG P+ L+ S++G GE + +Q
Sbjct: 129 QHGLMLAEAEAINKGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSAAARADVQR 188
Query: 257 YDA---IILSASSTKKYSIPA------SQEPDAN---------QPFRIITVS-NHASP 295
Y A ILS+S+T PA S + D QP R+I S N +P
Sbjct: 189 YRAQSSAILSSSATVLADDPALTVRWDSLDEDTQRLYPREHLRQPLRVIVDSHNRVTP 246
>gi|226324277|ref|ZP_03799795.1| hypothetical protein COPCOM_02056 [Coprococcus comes ATCC 27758]
gi|225206725|gb|EEG89079.1| riboflavin biosynthesis protein RibD [Coprococcus comes ATCC 27758]
Length = 370
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 132/226 (58%), Gaps = 15/226 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYMRR +ELA K G T+PNPMVG VIVKDG I+GEG+H K G+ HAE A+ E
Sbjct: 3 DEFYMRRAIELAKKGRGWTNPNPMVGAVIVKDGSIIGEGYHEKCGELHAERNAIASLTES 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC HYG+TPPCTEA+++ K+ +VV+G DPNP V+ KG + LR+AG+ V
Sbjct: 63 AEGATLYVTLEPCCHYGKTPPCTEAILEQKIARVVIGSRDPNPKVSGKGAKILREAGVRV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
E C LN F H I TG P+ ++Y ++ +G + + G SG L+ E
Sbjct: 123 EEDFLREECDALNPVFFHYITTGLPYVVMKYAMTADGKIATKTGASKWISGEEARSLVHE 182
Query: 257 ----YDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRI 298
Y AI+ + A+ P + + SP+RI
Sbjct: 183 MRHDYMAIMAGIGTVL-----------ADDPMLNVRLEGKKSPVRI 217
>gi|418515299|ref|ZP_13081480.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|410708018|gb|EKQ66467.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 369
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 113/166 (68%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V++VV M DP P VN G LR+AGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V GV + LN+ F+ R+ G+P+ ++ S++G GE
Sbjct: 131 VLSGVMQAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGE 176
>gi|372276409|ref|ZP_09512445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea sp. SL1_M5]
gi|390435693|ref|ZP_10224231.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Pantoea agglomerans IG1]
Length = 366
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 141/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 2 DELYMARALELARRGRFTTMPNPNVGCVIVRDGEVVGEGWHQRAGEPHAEVHALRMAGEK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL AGI+V
Sbjct: 62 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLHRLHQAGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 122 SHGLMMPEAEVLNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSPAARRDVQR 181
Query: 254 LQEYDAIILSASSTKKYSIPA-----------SQ----EPDANQPFRIITVS-NHASP 295
L+ A ILS+S+T P+ SQ E QP R+I S N +P
Sbjct: 182 LRAQSAAILSSSATVLADDPSLTVRWSELNAESQALLDEQQLRQPVRVIIDSQNRVTP 239
>gi|134105070|pdb|2O7P|A Chain A, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With The Oxidised Nadp+ Cofactor In The Active
Site Of The Reductase Domain
gi|134105071|pdb|2O7P|B Chain B, The Crystal Structure Of Ribd From Escherichia Coli In
Complex With The Oxidised Nadp+ Cofactor In The Active
Site Of The Reductase Domain
Length = 380
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/239 (44%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +Y R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 8 DEYYXARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRXAGEK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV DPNP V +GL RL+ AGIDV
Sbjct: 68 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASXQDPNPQVAGRGLYRLQQAGIDV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R TG P+ L+ S++G GE + QL
Sbjct: 128 SHGLXXSEAEQLNKGFLKRXRTGFPYIQLKLGASLDGRTAXASGESQWITSPQARRDVQL 187
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
L+ IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 188 LRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 246
>gi|255528573|ref|ZP_05395347.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
P7]
gi|296188130|ref|ZP_06856522.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
P7]
gi|255507738|gb|EET84204.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
P7]
gi|296047256|gb|EFG86698.1| riboflavin biosynthesis protein RibD [Clostridium carboxidivorans
P7]
Length = 370
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 199/374 (53%), Gaps = 22/374 (5%)
Query: 70 VQNNDKD-DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVF 128
+ +N K+ D +YM+ + LA K G+ +PNP+VG VIV +G IVG+G+H G PHAEV+
Sbjct: 1 MNDNKKNLDEYYMKMALNLALKGQGNVNPNPLVGAVIVNNGNIVGQGYHKFYGGPHAEVY 60
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
AL++AGE A+G YVSLEPC+HYG+TPPC EA++KA +KKVV+ M DPN +V G++
Sbjct: 61 ALKEAGESAKGGELYVSLEPCSHYGKTPPCAEAVLKAGIKKVVIAMKDPNSLVAGNGIKL 120
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAE 245
L G++V VGV +E K++NE FI I PF L+ ++++G + + GE E
Sbjct: 121 LEKNGVEVIVGVLEEEAKKVNEIFIKYITEKTPFVILKTAMTLDGKIATKTGESQWITGE 180
Query: 246 SGGYYSQLLQEYDAIILSASSTKKYSIPASQE---PDANQPFRIITVSNHASPIRIPGLS 302
Y ++ I++ T K P D P II S + P+ +
Sbjct: 181 ESRKYVHTIRNRVMGIMAGIGTIKKDNPLLTTRFIEDGKSPTAIIVDSKLSIPVESKIFT 240
Query: 303 EESSSKVIVFTDGEITVEP--DMGTKGIETV----NLHQLNLKAVLDYCYSHGFCSVLVD 356
+ K+I+ E + ++ KGI+ + + ++++LK ++ G S+L++
Sbjct: 241 TLNERKIIIACTEEFDAKKKEELEQKGIKIIITPKDNNRVDLKYLMKELGKEGIDSILLE 300
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQ 413
G+L ++ ++ KI+ + P + G+ P + + L +++ +
Sbjct: 301 ---GGGELNF---SALDSKIVDKILCFIAPKILGGASAKTPVEGSGIEILKNAVLINKMN 354
Query: 414 PKMSSQSIVLEGYL 427
K + +++EGY
Sbjct: 355 CKNVGEDLLIEGYF 368
>gi|432717422|ref|ZP_19952424.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE9]
gi|431267026|gb|ELF58559.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE9]
Length = 367
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|381196744|ref|ZP_09904085.1| pyrimidine deaminase [Acinetobacter lwoffii WJ10621]
Length = 367
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 123/184 (66%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M++ + LA + ST PNP VGCVIVKDG ++G G+HPKAGQPHAEVFA+R+AGE
Sbjct: 12 DQAWMKQAIALALQGQYSTKPNPNVGCVIVKDGLLLGTGYHPKAGQPHAEVFAMREAGEQ 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+GATAYV+LEPC HYGRTPPC + L++A V +VV+ DPNP+V KG++ L++AGI+V
Sbjct: 72 TQGATAYVTLEPCAHYGRTPPCAKGLVEAGVARVVIACPDPNPLVAGKGVQILKEAGIEV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +LN F+ + TG P+ L+ S++G GE +G +Q
Sbjct: 132 DVGICQAEAHQLNAGFLKAMATGMPYVRLKVASSLDGRTAMASGESKWITGSDARLDVQH 191
Query: 257 YDAI 260
+ AI
Sbjct: 192 FRAI 195
>gi|225181336|ref|ZP_03734780.1| riboflavin biosynthesis protein RibD [Dethiobacter alkaliphilus AHT
1]
gi|225167917|gb|EEG76724.1| riboflavin biosynthesis protein RibD [Dethiobacter alkaliphilus AHT
1]
Length = 367
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 6/244 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM ++LA + G+TSPNPMVG V+VKDG+ VG G+H KAG PHAE+ AL +AGE
Sbjct: 4 DERYMWLALDLAAQGQGTTSPNPMVGAVLVKDGETVGTGYHQKAGGPHAEIIALEEAGEA 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H G+TPPC + +I A V+KVVV M DPN +VN GL++L++AGI V
Sbjct: 64 ARGATLYVTLEPCSHTGKTPPCVDRIIAAGVRKVVVAMQDPNELVNGLGLKKLQEAGIKV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
GV +E RLNE F+ I + +PF T++ ++++G + + SG + +
Sbjct: 124 KSGVLEEKALRLNEVFVKYITSRRPFVTMKAAMTMDGKIATRTKASRWISGERSREFGHR 183
Query: 253 LLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L DAI++ + S+ P RI+ S +P+ ++E +I
Sbjct: 184 LRHHTDAIMVGIGTLLADNPSLTTRLPEGGKNPLRIVVDSKANTPLDSKVVAENPEKTLI 243
Query: 311 VFTD 314
TD
Sbjct: 244 FVTD 247
>gi|406037781|ref|ZP_11045145.1| bifunctional protein ribD [Acinetobacter parvus DSM 16617 = CIP
108168]
Length = 366
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 131/190 (68%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
QN+ D ++M+R +ELA ST PNP VGCV+VK+ +++GEGFHPKAGQPHAEVFAL
Sbjct: 6 QNHLSQDQYWMQRAIELARLGQYSTKPNPNVGCVLVKNDQLIGEGFHPKAGQPHAEVFAL 65
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R AGE A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L+
Sbjct: 66 RQAGEHAKGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACSDPNPLVAGKGVQILQ 125
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
AGI+V G+ E K LN F+ + TG P+ L+ S++G GE +G
Sbjct: 126 AAGIEVETGICVETAKTLNLGFLKAMSTGLPYVRLKIASSLDGRTAMASGESKWITGPAA 185
Query: 251 SQLLQEYDAI 260
Q +Q + A+
Sbjct: 186 RQDVQHWRAV 195
>gi|193215778|ref|YP_001996977.1| riboflavin biosynthesis protein RibD [Chloroherpeton thalassium
ATCC 35110]
gi|193089255|gb|ACF14530.1| riboflavin biosynthesis protein RibD [Chloroherpeton thalassium
ATCC 35110]
Length = 368
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 194/375 (51%), Gaps = 26/375 (6%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
+Q N +D FY+ RC++LA K G SPNP+VG VIV +GKI+GEGFH G PHAEV A
Sbjct: 1 MQKNFSEDEFYIDRCLKLAKKGAGFVSPNPLVGSVIVHNGKIIGEGFHEVYGGPHAEVNA 60
Query: 130 LRDAGE--LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLE 187
+ + L + +T YV+LEPC H+G+TPPC + +I+ K+ +VV+G LDP V+ KG E
Sbjct: 61 IGSVAQPILLQESTLYVNLEPCAHFGKTPPCADLIIRHKIPRVVIGCLDPFEHVSGKGAE 120
Query: 188 RLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VA 244
+LR AG++V VGV + RLNEAFIH + +PF L++ +++G + G+
Sbjct: 121 KLRHAGVEVKVGVLESEALRLNEAFIHFHIQKRPFVALKFAQTLDGKIATTSGDSKWITN 180
Query: 245 ESGGYYSQLLQEYDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLS 302
++ L+ + + IL ++T P + + P R++ + P+ +
Sbjct: 181 KASRTLGHQLRSWHSAILIGTNTALADDPELTVRHVEGKNPVRVLLDRRLSVPLTAKIFN 240
Query: 303 EESSSKVIVFTDGEITVEPDMGT---KGIE----TVNLHQLNLKAVLDYCYSHGFCSVLV 355
+++ +VFT + T P +G K +E T N L+ + Y SV V
Sbjct: 241 --AAANTLVFTSSQNTNHPKVGKLNEKNVEVFFVTENEAGLSFSEIFQVLYEKKLLSVYV 298
Query: 356 DLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG---GNPHTLLNSLGKRLILKNL 412
+ G G L++EG +K + P G DG P + N + + + L+
Sbjct: 299 E--GGSGVYSRLIQEG----YCEKFYGFIAPKIVGGDGLATFRPLEITN-MAEAVSLRFH 351
Query: 413 QPKMSSQSIVLEGYL 427
Q +M I +EGY
Sbjct: 352 QVQMLDGDIFIEGYF 366
>gi|261346387|ref|ZP_05974031.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM
4541]
gi|282565705|gb|EFB71240.1| riboflavin biosynthesis protein RibD [Providencia rustigianii DSM
4541]
Length = 371
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 3/203 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R ELA K +TSPNP VGCVIV+DG++VGEG+H KAG+PHAEV ALR AG
Sbjct: 3 EQDRIYMARAFELARKGRFTTSPNPNVGCVIVRDGEVVGEGYHQKAGEPHAEVHALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A GATAYV+LEPC+H+GRTPPC EALIKA V +VV M DPNP V +GL L AGI
Sbjct: 63 DKARGATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVASMQDPNPQVAGRGLYMLSQAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ + + E + LN F+ R+ T P+ L+ S++G + GE + +
Sbjct: 123 ETSSNILLEQAEALNRGFLKRMRTAFPYIQLKLAASLDGKTALESGESKWITSPAARKDV 182
Query: 252 QLLQEYDAIILSASSTKKYSIPA 274
Q+L+ + ILS S+T PA
Sbjct: 183 QVLRAQASAILSTSNTVIADDPA 205
>gi|395228122|ref|ZP_10406446.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
A1]
gi|421843747|ref|ZP_16276907.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424730619|ref|ZP_18159214.1| riboflavin biosynthesis protein [Citrobacter sp. L17]
gi|394718244|gb|EJF23881.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
A1]
gi|411775468|gb|EKS58914.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422894812|gb|EKU34619.1| riboflavin biosynthesis protein [Citrobacter sp. L17]
gi|455641827|gb|EMF20998.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Citrobacter freundii GTC 09479]
Length = 367
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEVEQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ IL++S+T
Sbjct: 183 LRAQSHAILTSSAT 196
>gi|226950300|ref|YP_002805391.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str.
Kyoto]
gi|226842626|gb|ACO85292.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A2 str.
Kyoto]
Length = 365
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 195/372 (52%), Gaps = 28/372 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++VK+ KI+GEG+H G HAEV+ALR+AG
Sbjct: 2 EDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGSHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E+++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+V G+ ++ K+LNE FI I KPF L+ +++G + + GE E Y
Sbjct: 122 EVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATRTGESKWITGEDARYKV 181
Query: 252 QLLQEYDAIILSASST--KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
Q ++ + I+ T K + ++ P II SN P+ L + +
Sbjct: 182 QQIRNDLSGIMVGIGTIIKDNPLLTTRIEGGRSPRAIIVDSNLRIPLESKILETLNKRAI 241
Query: 310 IVFTD------GEITVEPDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ T + ++G K +E + + L ++ Y S G S+L L G
Sbjct: 242 YIATTKKHNNFSKKNALENLGAKVLEFEENEEGKVPLNELMQYLGSEGVDSIL--LEGGS 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKNLQPK 415
LKEGI + K++ + P + G D GGN + SL L+NL+ +
Sbjct: 300 TLNFSALKEGI----VDKVMCFIAPKIMGGQDSKNMIGGNG---VESLKDIFNLQNLKFE 352
Query: 416 MSSQSIVLEGYL 427
Q I++EGY+
Sbjct: 353 KIGQDILIEGYV 364
>gi|387819142|ref|YP_005679489.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Clostridium
botulinum H04402 065]
gi|322807186|emb|CBZ04760.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Clostridium
botulinum H04402 065]
Length = 365
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 193/389 (49%), Gaps = 62/389 (15%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++VK+ KI+GEG+H G PHAEV+ALR+AG
Sbjct: 2 EDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E+++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 ERAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY-Y 250
+V G+ ++ K+LNE FI I KPF L+ +++G + + GE E Y
Sbjct: 122 EVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATKTGESKWITGEEARYKV 181
Query: 251 SQLLQEYDAIILSASSTKK------YSIPASQEPDA--------------------NQPF 284
Q+ + I++ + K I + P A +
Sbjct: 182 HQIRNDLSGIMVGIGTIIKDNPLLNTRIERGRSPKAIIVDSSLRIPLESKILETLNERTI 241
Query: 285 RIITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDY 344
I T H +P + L E +KV+ F + E P L ++ Y
Sbjct: 242 YIATTKKHKNPSKKNAL-ENLGAKVLEFEENEEGKVP----------------LNELMQY 284
Query: 345 CYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHT 398
S G S+L L G LKEGI + K++ + P + G D GGN
Sbjct: 285 LGSEGVDSIL--LEGGSTLNFSALKEGI----VDKVMCFIAPKIMGGQDSKNMIGGNG-- 336
Query: 399 LLNSLGKRLILKNLQPKMSSQSIVLEGYL 427
+ SL L+NL+ + Q I++EGY+
Sbjct: 337 -VESLKDIFNLQNLKFEKIGQDILIEGYV 364
>gi|317122797|ref|YP_004102800.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Thermaerobacter marianensis DSM 12885]
gi|315592777|gb|ADU52073.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Thermaerobacter marianensis DSM 12885]
Length = 427
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 162/276 (58%), Gaps = 13/276 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MRR + LA++A G T PNPMVG VIV+DG++VGEGFH +AG+PHAE+ ALR AGE
Sbjct: 35 DRAFMRRALRLASRARGRTHPNPMVGAVIVRDGEVVGEGFHRRAGEPHAEIEALRMAGER 94
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC HYGRTPPCT A+I A +++VVV M+DP+P V +G+ L AGI+V
Sbjct: 95 ARGATLYVTLEPCCHYGRTPPCTGAIISAGLRRVVVAMVDPDPRVAGRGIAALAAAGIEV 154
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
VG+E+E +RLNEA+I G+P T +Y ++++G + G+ +G + +
Sbjct: 155 AVGLEEEAARRLNEAYIVHRRLGRPMVTAKYAMTLDGRIATARGDSRWVTGIRARRWAHR 214
Query: 253 LLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASP--IRIPGLSEESSSK 308
L DAI++ + + P P RI+ S+ +P R+ ++ +S +
Sbjct: 215 LRDRVDAILVGVGTVLADDPLLTVRLHPGGRDPLRIVLDSHARTPPTARVVQVARQSPAP 274
Query: 309 V-IVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLD 343
+ T G P +G+E + L A D
Sbjct: 275 TWVAVTPG----APAARVRGLEEAGARVVTLPAGPD 306
>gi|168179301|ref|ZP_02613965.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC
2916]
gi|182669874|gb|EDT81850.1| riboflavin biosynthesis protein RibD [Clostridium botulinum NCTC
2916]
Length = 365
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 203/375 (54%), Gaps = 34/375 (9%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++VK+ KI+GEG+H G PHAEV+ALR+AG
Sbjct: 2 EDYNFYMEKALKLAKRGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E+++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY-Y 250
+V G+ ++ K+LNE FI I KPF L+ +++G + + GE E Y
Sbjct: 122 EVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATKTGESKWITGEEARYKV 181
Query: 251 SQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE--ESSSK 308
Q+ + I++ + K + + + + + I V S +RIP S+ E+ ++
Sbjct: 182 HQIRNDLSGIMVGIGTIIKDNPLLTTRIERGRSPKAIIVD---SSLRIPLESKILETLNE 238
Query: 309 VIVF--------TDGEITVEPDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLR 358
++ + + V ++G K +E + + L ++ Y S G S+L L
Sbjct: 239 RTIYIAATKKHKSPSKKNVLENLGAKVLEFEENEEGKVPLNELMQYLGSEGVDSIL--LE 296
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKNL 412
G LKEGI + K++ + P + G D GGN + SL L+NL
Sbjct: 297 GGSTLNFSALKEGI----VDKVMCFIAPKIMGGQDSKNMIGGNG---VESLKDIFNLQNL 349
Query: 413 QPKMSSQSIVLEGYL 427
+ + Q I++EGY+
Sbjct: 350 KFEKIGQDILIEGYV 364
>gi|149187995|ref|ZP_01866290.1| pyrimidine reductase [Vibrio shilonii AK1]
gi|148837983|gb|EDL54925.1| pyrimidine reductase [Vibrio shilonii AK1]
Length = 369
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 186/354 (52%), Gaps = 51/354 (14%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +T+PNP VGCVI + ++VGEG+H KAG+PHAEV ALR A E
Sbjct: 8 DYQMMSRALELAKRGRFTTAPNPNVGCVITLNNEVVGEGYHKKAGEPHAEVHALRMAAER 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA V KV+ M DPNP V +G LR+AGI+V
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCAEGLIKAGVSKVICAMSDPNPQVAGRGFNMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLL 254
+VG+ ++ + LN F+ ++ TG PF L+ S++G L G+++ +G + +
Sbjct: 128 SVGLLEQDARALNPGFLKKMETGMPFVQLKMAASLDGQT--ALANGISQWITGPEARRDV 185
Query: 255 QEYDA---IILSASST----------KKYSIPASQ----EPDA-NQPFRIITVSNHASPI 296
Q Y A ILS S T + +P+ +PD QP R+I +A
Sbjct: 186 QAYRAQSGAILSTSQTVVEDNASLNVRWDELPSHVTDVIKPDELRQPTRVILDRQNALSR 245
Query: 297 RIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVN-LHQLNLKAVL-----DYCYSHGF 350
+ E + G++ V T+N +QL+L L D +H +
Sbjct: 246 ELKLFQSEGDIIRVAQAGGDLNV----------TMNSANQLDLAETLQGLAKDQQINHVW 295
Query: 351 CSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
L G+ I+Q L+ +++V + P G+DG L+ +LG
Sbjct: 296 IEAGATLAGSM----------IQQQLVDELIVYLAPKLMGADG---RGLIGALG 336
>gi|350571008|ref|ZP_08939348.1| riboflavin biosynthesis protein RibD [Neisseria wadsworthii 9715]
gi|349793788|gb|EGZ47616.1| riboflavin biosynthesis protein RibD [Neisseria wadsworthii 9715]
Length = 368
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/244 (43%), Positives = 143/244 (58%), Gaps = 7/244 (2%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
ND D M+ + LA + STSPNP VGCVI +IVG+GFH +AG PHAEV+AL+
Sbjct: 3 NDTDIRL-MQTALTLAWEGRFSTSPNPRVGCVIAHGDQIVGQGFHIRAGSPHAEVYALQQ 61
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AG+LA+GATAYV+LEPC+H+GRTPPC EALIKAKVK+VV M DPNP+V+ KGL L +
Sbjct: 62 AGKLAQGATAYVTLEPCSHHGRTPPCAEALIKAKVKRVVAAMTDPNPLVSGKGLTLLTQS 121
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY 249
GI G+ ++ + LN F+ RI G+PF L+ S++G G+ E+
Sbjct: 122 GIQTESGLLEQKARLLNRGFLSRIERGRPFIRLKCAASLDGKTALSNGQSQWITGEAARS 181
Query: 250 YSQLLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
Q+L+ +L+ T P P QP RII S +P+ + + +S
Sbjct: 182 DVQILRAESCAVLTGIGTVLADNPKLNVRTFPTLRQPIRIILDSRLQTPLDSFVIQDSNS 241
Query: 307 SKVI 310
+I
Sbjct: 242 LSII 245
>gi|237730390|ref|ZP_04560871.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
30_2]
gi|226905929|gb|EEH91847.1| riboflavin bifunctional biosynthesis protein ribD [Citrobacter sp.
30_2]
Length = 367
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEVEQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ IL++S+T
Sbjct: 183 LRAQSHAILTSSAT 196
>gi|315125800|ref|YP_004067803.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
gi|315014314|gb|ADT67652.1| riboflavin biosynthesis protein [Pseudoalteromonas sp. SM9913]
Length = 375
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 185/345 (53%), Gaps = 30/345 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+DD YM R +ELA K +T+PNP VGCV+VK+ KI+GEGFH AGQ HAEV AL AG
Sbjct: 9 EDDKRYMARAIELAKKGRFTTTPNPNVGCVLVKNNKIIGEGFHRLAGQGHAEVNALTMAG 68
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+HYGRTPPC E L A VKKV+ M+D NP V KGL+ L DAGI
Sbjct: 69 ENAKGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAGKGLKILADAGI 128
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V G+ + + LN F R+ G PF T + S++G + G+ +G Q +
Sbjct: 129 EVAYGLLEAQARALNFGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDV 188
Query: 255 QEYDA---IILSASST----------KKYSIPASQEPD--ANQPFRIITVSNHASPIRIP 299
Q Y A IL+ + T + +P S D QP R++ S + P
Sbjct: 189 QLYRAQSCAILTGADTVLMDDAKLNVRPEELPYSLPTDLPLRQPVRVVIDSQNR---LTP 245
Query: 300 GLSEES-SSKVIVFTDG-EITVEPDMGTKGIET-VNLHQLNLKAVLDYCYSHGFCSVLVD 356
L+ S S+VI+FT + + + K IE N ++++L AVL F +V ++
Sbjct: 246 DLALFSIQSEVIIFTTKVDKSHQWPHFVKQIEVPENNNKVDLLAVLHTLAQLQFNNVWLE 305
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN 401
L + E +L+ + V + P GSD +LLN
Sbjct: 306 AGAT------LAGKMTELDLIDEFVFYIAPKLMGSDA---KSLLN 341
>gi|442322166|ref|YP_007362187.1| riboflavin biosynthesis protein RibD [Myxococcus stipitatus DSM
14675]
gi|441489808|gb|AGC46503.1| riboflavin biosynthesis protein RibD [Myxococcus stipitatus DSM
14675]
Length = 387
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 191/372 (51%), Gaps = 37/372 (9%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
F+MR +E A K +G TSPNP+VG V+VK G+I+ G+H KAG HAEV AL AG A
Sbjct: 30 FFMRIALEEAAKGLGRTSPNPVVGAVLVKGGRIIARGYHKKAGTAHAEVVALEAAGSKAR 89
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GA Y +LEPC+HYGRTPPC+ A+I+A V++V G DPNP V+ KG+ R+R AG+ V
Sbjct: 90 GADLYSTLEPCDHYGRTPPCSLAIIEAGVRRVFCGSADPNPKVSGKGVARMRRAGVKVVT 149
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLL 254
GV +LN F I TG P+ TL+ +++G + G+ +G + +L
Sbjct: 150 GVLQAEADKLNRPFFKAINTGLPWVTLKAAATLDGKLATATGDSRWVTGEKAREWVHRLR 209
Query: 255 QEYDAIILSASSTKK------YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
D I++ A++ ++ +P + DA R++ S+ R S++SS++
Sbjct: 210 DSVDVILVGANTVRQDDPKLTTRLPGGKGKDA---LRVVVDSHLRLSPRYSVFSQKSSAR 266
Query: 309 VIVFT--DGEITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGNYG 362
I+ T D E +G+E L +++LKA+L G VLV+ G
Sbjct: 267 TIIATLEDPEGRKAKRFLAQGVEVWQLRAKADRVDLKALLRKLARSGLNHVLVE-----G 321
Query: 363 DLEM---LLKEGIEQNLLQKIVVEVLP----VWNGSDGGNPHTLLNSLGKRLILKNLQPK 415
EM L+E + L + ++L W G G + + + L +K+L +
Sbjct: 322 GAEMYGSFLREHLADELALFLAPKLLGREGLSWAGDLG------VKEMAQALSVKDLTFE 375
Query: 416 MSSQSIVLEGYL 427
Q I+L+ L
Sbjct: 376 QHGQDILLQALL 387
>gi|213969282|ref|ZP_03397420.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|213925960|gb|EEB59517.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 366
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 126/190 (66%), Gaps = 3/190 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M +ELA K + ST PNP VGCVIV+DG+IVG+G+H +AG+PHAEV ALR+AGELA GA
Sbjct: 1 MAHALELARKGLYSTHPNPRVGCVIVRDGQIVGQGWHARAGEPHAEVHALREAGELARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H GRTPPC +ALI A + +VV M DPNP V GL RL AGI V GV
Sbjct: 61 TAYVTLEPCSHQGRTPPCADALISAGLARVVAAMQDPNPQVAGSGLLRLMTAGISVQCGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QLLQEY 257
+ + LN+ FI R+ TG+P+ ++ +S++G GE +G Q L+
Sbjct: 121 LESEARALNKGFIKRMETGRPYVRVKMAMSLDGRTAMASGESQWITGPEARSAVQRLRAQ 180
Query: 258 DAIILSASST 267
+++L+ + T
Sbjct: 181 SSVVLTGADT 190
>gi|295096804|emb|CBK85894.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 367
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 142/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVVGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + +N+ F+ R+ TG PF L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAENINKGFLKRMRTGFPFIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
L+ IL++S T PA +E +A+ QP RII S N +P
Sbjct: 183 LRAQSHAILTSSETVLADDPAMTVRWEELNADTQALYPQENLRQPLRIIVDSQNRVTP 240
>gi|452881560|ref|ZP_21958290.1| riboflavin-specific deaminase/reductase, partial [Pseudomonas
aeruginosa VRFPA01]
gi|452182250|gb|EME09268.1| riboflavin-specific deaminase/reductase, partial [Pseudomonas
aeruginosa VRFPA01]
Length = 237
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+V+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVRDGQVVGEGWHVRAGEPHAEVHALRQAGEK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ G PF ++ +S++G GE +G Q
Sbjct: 125 HSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|420370079|ref|ZP_14870695.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1235-66]
gi|391320508|gb|EIQ77340.1| riboflavin biosynthesis protein RibD [Shigella flexneri 1235-66]
Length = 367
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 118/165 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE
Sbjct: 123 SHGLMMSEVEQLNKGFLKRMRTGFPYVQLKLGASLDGRTAMASGE 167
>gi|16272881|ref|NP_439104.1| riboflavin biosynthesis protein [Haemophilus influenzae Rd KW20]
gi|260580033|ref|ZP_05847863.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae RdAW]
gi|1172932|sp|P44326.1|RIBD_HAEIN RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
gi|1573964|gb|AAC22598.1| riboflavin biosynthesis protein (ribD) [Haemophilus influenzae Rd
KW20]
gi|260093317|gb|EEW77250.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae RdAW]
Length = 372
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
TV + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 TVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA-----SQEPD----------ANQPFRIITVSNH 292
A +LS S+T P+ + P+ QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTEYKKEWLRQPVRVILDSQH 241
>gi|432429562|ref|ZP_19672022.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE181]
gi|432639532|ref|ZP_19875377.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE83]
gi|433176859|ref|ZP_20361326.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE82]
gi|430947397|gb|ELC67095.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE181]
gi|431185107|gb|ELE84837.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE83]
gi|431710564|gb|ELJ74938.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE82]
Length = 367
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMVSGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|404493065|ref|YP_006717171.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Pelobacter carbinolicus DSM 2380]
gi|77545129|gb|ABA88691.1| 2,5-diamino-6-(5'-phosphoribosylamino)-4-(3H)-pyrimidinone
deaminase and 5-amino-6-(5'-phosphoribosylamino)uracil
reductase [Pelobacter carbinolicus DSM 2380]
Length = 371
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 174/330 (52%), Gaps = 21/330 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
+MR+ ++LA + G T PNP VG +IVKDG+IVG GFHPKAGQPHAE++ALR+AG+ A G
Sbjct: 8 FMRQAIDLARRGEGRTRPNPAVGALIVKDGEIVGRGFHPKAGQPHAEIYALREAGDRARG 67
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A YV+LEPC+H+GRT PC +A+I+A + +V VG LDPNP V G+ +L+ AGI+V G
Sbjct: 68 ADMYVTLEPCSHHGRTGPCADAIIEAGLARVYVGTLDPNPQVAGGGIRKLQGAGIEVHCG 127
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQ 255
V + LC+R+ F I+T KPF L+ ++++G G A S +L
Sbjct: 128 VLENLCRRIIAPFAKHILTAKPFVVLKSAMTLDGKTATASGHSQWVTSAASRHEVHKLRD 187
Query: 256 EYDAIILSASSTKKYSIP-ASQEPD--ANQPFRIITVSNHASPIRIPGLSEESSSKVIVF 312
D I++ + + ++ PD P RI+ S+ P L+ +SS+ ++
Sbjct: 188 RMDGIMVGIGTVLQDDPQLTTRLPDEGGRDPERIVLDSSLRIPEDAAILNLQSSAATLIA 247
Query: 313 TDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGI 372
T + + I L L H + L G G +LL+ G
Sbjct: 248 TTARAS---KAKIEAIRAAGAEVLVLPESGGRVDLHALMTAL----GARGLQSILLEGGA 300
Query: 373 EQN-------LLQKIVVEVLPVWNGSDGGN 395
E N L+ ++++ + P G DGG
Sbjct: 301 ELNGAFWRAGLVDRVMMFIAPKIVGGDGGK 330
>gi|58583479|ref|YP_202495.1| bifunctional riboflavin-specific deaminase/5-amino-6-uracil
reductase [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84625292|ref|YP_452664.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575264|ref|YP_001912193.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58428073|gb|AAW77110.1| riboflavin-specific deaminase; 5-amino-6-uracil reductase
[Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84369232|dbj|BAE70390.1| riboflavin-specific deaminase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519716|gb|ACD57661.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 369
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 123/195 (63%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V +VV M DP P VN G LRDAGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLRDAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + LN+ F+ R+ G+P+ ++ S++G G+ +G +Q
Sbjct: 131 VLSGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGQSKWITGADARADVQ 190
Query: 256 EYDA---IILSASST 267
+ A IL+ + T
Sbjct: 191 RWRARAGAILTGAGT 205
>gi|298156564|gb|EFH97660.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 366
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA + ST PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGELA GA
Sbjct: 1 MARALELARNGLYSTHPNPRVGCVIVRDGQIVGEGWHVRAGEPHAEVHALRQAGELARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H GRTPPC +AL+ A + +VV M DPNP V+ +GL RL +AGI V GV
Sbjct: 61 TAYVTLEPCSHQGRTPPCADALVNAGLARVVAAMQDPNPDVSGRGLLRLMNAGIGVQCGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QLLQEY 257
+ + LN+ F+ R+ TG+P+ ++ +S++G GE +G Q L+
Sbjct: 121 LESEARALNKGFLKRMETGQPYIRVKMAMSLDGRTAMASGESQWITGPEARSAVQRLRAQ 180
Query: 258 DAIILSASST 267
+++L+ + T
Sbjct: 181 SSVVLTGADT 190
>gi|152986432|ref|YP_001346431.1| riboflavin-specific deaminase/reductase [Pseudomonas aeruginosa
PA7]
gi|150961590|gb|ABR83615.1| riboflavin biosynthesis protein RibD [Pseudomonas aeruginosa PA7]
Length = 373
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + ST PNP VGCV+V+DG++VGEG+H +AG+PHAEV ALR AGE
Sbjct: 5 DPLYMARALELARQGLYSTHPNPRVGCVLVRDGQVVGEGWHVRAGEPHAEVHALRQAGEK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL AGI V
Sbjct: 65 ARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
GV + + LN FI R+ G PF ++ +S++G GE +G Q
Sbjct: 125 HSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARSAVQR 184
Query: 254 LQEYDAIILSASST 267
L+ +++LS + T
Sbjct: 185 LRARSSVVLSGADT 198
>gi|398792083|ref|ZP_10552781.1| riboflavin biosynthesis protein RibD [Pantoea sp. YR343]
gi|398214215|gb|EJN00798.1| riboflavin biosynthesis protein RibD [Pantoea sp. YR343]
Length = 367
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DERYMARALELARRGRFTTTPNPNVGCVIVREGEIVGEGWHQRAGEPHAEVHALRMAGER 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AAGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 123 SHGLMMNEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ + ILS S+T
Sbjct: 183 LRAQSSAILSTSAT 196
>gi|301022597|ref|ZP_07186469.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1]
gi|300397478|gb|EFJ81016.1| riboflavin biosynthesis protein RibD [Escherichia coli MS 69-1]
Length = 367
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|384417824|ref|YP_005627184.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353460738|gb|AEQ95017.1| riboflavin biosynthesis protein RibD [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 369
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 123/195 (63%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V +VV M DP P VN G LRDAGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGGFALLRDAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + LN+ F+ R+ G+P+ ++ S++G G+ +G +Q
Sbjct: 131 VLSGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGQSKWITGADARADVQ 190
Query: 256 EYDA---IILSASST 267
+ A IL+ + T
Sbjct: 191 RWRARAGAILTGAGT 205
>gi|294627697|ref|ZP_06706279.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292598049|gb|EFF42204.1| 5-amino-6-uracil reductase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 369
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 111/166 (66%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V +VV M DP P VN G LR+AGID
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVMRVVAAMADPFPQVNGGGFALLREAGID 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V GV + LN F+ R+ G+P+ ++ S++G GE
Sbjct: 131 VLSGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGE 176
>gi|421725263|ref|ZP_16164459.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca M5al]
gi|410373924|gb|EKP28609.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca M5al]
Length = 367
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ G+DV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGVDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|424934828|ref|ZP_18353200.1| Bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|407809015|gb|EKF80266.1| Bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 367
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|378977265|ref|YP_005225406.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419973346|ref|ZP_14488771.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419978529|ref|ZP_14493825.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419983916|ref|ZP_14499065.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419989967|ref|ZP_14504941.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419995847|ref|ZP_14510652.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420000758|ref|ZP_14515416.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420007616|ref|ZP_14522109.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013319|ref|ZP_14527630.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420018403|ref|ZP_14532600.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024495|ref|ZP_14538508.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420030253|ref|ZP_14544080.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420035356|ref|ZP_14549020.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420041690|ref|ZP_14555186.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420047752|ref|ZP_14561068.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053453|ref|ZP_14566631.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058296|ref|ZP_14571309.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420064584|ref|ZP_14577393.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070329|ref|ZP_14582981.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420076140|ref|ZP_14588613.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420081887|ref|ZP_14594191.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421908638|ref|ZP_16338473.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421915630|ref|ZP_16345228.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|428939264|ref|ZP_19012377.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae VA360]
gi|364516676|gb|AEW59804.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397348818|gb|EJJ41916.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397351600|gb|EJJ44683.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397354967|gb|EJJ47993.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397366831|gb|EJJ59446.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397368488|gb|EJJ61094.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397372973|gb|EJJ65445.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397380268|gb|EJJ72453.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397384317|gb|EJJ76437.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397390360|gb|EJJ82270.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397399110|gb|EJJ90767.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397402074|gb|EJJ93686.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397408092|gb|EJJ99468.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397416592|gb|EJK07765.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397418227|gb|EJK09386.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397424238|gb|EJK15145.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397433290|gb|EJK23940.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397437337|gb|EJK27906.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397441711|gb|EJK32077.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397447651|gb|EJK37841.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397452820|gb|EJK42886.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|410117429|emb|CCM81098.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410122139|emb|CCM87853.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426304335|gb|EKV66482.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae VA360]
Length = 367
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|283834269|ref|ZP_06354010.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC
29220]
gi|291069791|gb|EFE07900.1| riboflavin biosynthesis protein RibD [Citrobacter youngae ATCC
29220]
Length = 367
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEVEQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ IL++S+T
Sbjct: 183 LRAQSHAILTSSAT 196
>gi|330006909|ref|ZP_08305781.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3]
gi|328535663|gb|EGF62112.1| riboflavin biosynthesis protein RibD [Klebsiella sp. MS 92-3]
Length = 367
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|226942824|ref|YP_002797897.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ]
gi|226717751|gb|ACO76922.1| riboflavin biosynthesis protein RibD [Azotobacter vinelandii DJ]
Length = 361
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA + + ST PNP VGCVIV G+IVGEG+H +AG+PHAEV ALR AGE A GA
Sbjct: 1 MARALELARQGLYSTHPNPRVGCVIVAAGRIVGEGWHVRAGEPHAEVHALRQAGETARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC EAL+ A V +VV M DPNP V+ +GL RLR AGI+V VGV
Sbjct: 61 TAYVTLEPCSHHGRTPPCAEALVAAGVGRVVAAMQDPNPQVSGRGLARLRQAGIEVEVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG---YYSQLLQEY 257
+ + LN F+ R+ G P ++ +S++G GE +G Q L+
Sbjct: 121 LEAEARALNAGFVKRMEHGLPLVRVKLAMSLDGRTAMASGESQWITGAPARAAVQRLRAR 180
Query: 258 DAIILSASST 267
+++L+ + T
Sbjct: 181 SSVVLTGADT 190
>gi|365138428|ref|ZP_09345113.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 4_1_44FAA]
gi|363655091|gb|EHL93961.1| riboflavin biosynthesis protein RibD [Klebsiella sp. 4_1_44FAA]
Length = 367
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|381173584|ref|ZP_09882668.1| riboflavin biosynthesis protein RibD [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390989535|ref|ZP_10259832.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555804|emb|CCF66807.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|380685964|emb|CCG39155.1| riboflavin biosynthesis protein RibD [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 369
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 112/166 (67%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V++VV M DP P VN G LR+AGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V GV + LN F+ R+ G+P+ ++ S++G GE
Sbjct: 131 VLSGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGE 176
>gi|418521007|ref|ZP_13087053.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410702983|gb|EKQ61480.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 369
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 112/166 (67%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V++VV M DP P VN G LR+AGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V GV + LN F+ R+ G+P+ ++ S++G GE
Sbjct: 131 VLSGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGE 176
>gi|395232631|ref|ZP_10410881.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter sp. Ag1]
gi|394733033|gb|EJF32672.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter sp. Ag1]
Length = 372
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 136/229 (59%), Gaps = 18/229 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA + +T+PNP VGCVIVKDG IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 4 DEQFMARALELAKRGRFTTAPNPNVGCVIVKDGNIVGEGFHFRAGEPHAEVHALRMAGEQ 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG PF L+ S++G GE + Q
Sbjct: 124 SHGLMMNEAEALNRGFLKRMRTGFPFIQLKLGASLDGRTAMASGESKWITSPQARRDVQR 183
Query: 254 LQEYDAIILSASSTKKYSIP-----------ASQ----EPDANQPFRII 287
+ A ILS+ +T P ASQ + D QP RI+
Sbjct: 184 QRAQSAAILSSDATVLADNPSLTVRWDELDSASQAIYSQQDLRQPIRIV 232
>gi|21241517|ref|NP_641099.1| 5-amino-6-uracil reductase [Xanthomonas axonopodis pv. citri str.
306]
gi|21106864|gb|AAM35635.1| riboflavin-specific deaminase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 369
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 112/166 (67%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI+A V++VV M DP P VN G LR+AGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGGFALLREAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V GV + LN F+ R+ G+P+ ++ S++G GE
Sbjct: 131 VLSGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGE 176
>gi|407475037|ref|YP_006789437.1| riboflavin biosynthesis protein RibD [Clostridium acidurici 9a]
gi|407051545|gb|AFS79590.1| riboflavin biosynthesis protein RibD [Clostridium acidurici 9a]
Length = 365
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 202/376 (53%), Gaps = 40/376 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
+ YM+R +ELA K G SPNP+VG VIVK+ I+GEG+H G HAE+ AL+++ E
Sbjct: 2 ESVYMKRAIELAKKGEGHVSPNPLVGAVIVKNESIIGEGYHGFYGGDHAEINALKNSTES 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EG+T YV+LEPC+H+G+TPPC A+++ +KKVV+G+ DPN +V+ +G++ L+ GI+V
Sbjct: 62 VEGSTMYVTLEPCSHFGKTPPCVNAIVENNIKKVVIGLKDPNLLVSGRGIQILKSNGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQ 252
V ++ CK+LNE F+ I T PF L+Y ++++G + +G+ S + +
Sbjct: 122 VTSVLEDECKKLNEIFLKYITTKTPFVILKYAMTLDGKIATHIGDSKWISNSLSRKHVHE 181
Query: 253 LLQEYDAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
+ + +I++ + K + + ++ + P RII + P+ ++ +SSS+
Sbjct: 182 IRHKLSSIMVGIGTVLKDNPSLNTRLEDKEGLDPIRIIVDTKGRIPLDSKVINLKSSSRT 241
Query: 310 IVFT---------------DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVL 354
IV T D EI + P V ++L +L S G S+L
Sbjct: 242 IVATTELAPKDKLKALEDKDVEIIITP---------VKDSYVDLIYLLKSLGSKGIDSIL 292
Query: 355 VDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKN 411
++ G E+ +++N++ K+V + P + GS P T + + + L N
Sbjct: 293 LE-----GGSELSF-SALQENIVDKVVAFISPKIIGGSSAKTPIGGTGIEFMKDAINLNN 346
Query: 412 LQPKMSSQSIVLEGYL 427
+ K ++ I++EGY+
Sbjct: 347 ISLKTFNEDIMIEGYI 362
>gi|145632331|ref|ZP_01788066.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 3655]
gi|144987238|gb|EDJ93768.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae 3655]
Length = 372
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
++GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 SKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSLH 241
>gi|54307992|ref|YP_129012.1| pyrimidine deaminase/pyrimidine reductase [Photobacterium profundum
SS9]
gi|46912418|emb|CAG19210.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
profundum SS9]
Length = 371
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +T+PNP VGC+I + IVGEGFH +AGQPHAEVFALR AGE
Sbjct: 6 DHSMMLRAIELAKRGRFTTAPNPNVGCIIAQGATIVGEGFHYQAGQPHAEVFALRAAGEQ 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M+DPNP V +G+E L+ AGI+V
Sbjct: 66 AKGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIEMLKIAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + LN FI R+ TG P+ L+ S++G GE +G +Q
Sbjct: 126 QTGLLAADAQALNFGFIKRMKTGLPYVQLKLAASLDGRTALSNGESKWITGPEARADVQR 185
Query: 257 YDA---IILSASST 267
+ A ILS SST
Sbjct: 186 FRARAGAILSTSST 199
>gi|423106944|ref|ZP_17094639.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5243]
gi|376389070|gb|EHT01762.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5243]
Length = 367
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 141/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ G+DV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGVDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA + P N QP RI+ S N +P
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWDELNAETQALYPQENLRQPLRIVIDSHNRVTP 240
>gi|152968939|ref|YP_001334048.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150953788|gb|ABR75818.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 367
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|417842563|ref|ZP_12488645.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M21127]
gi|341951401|gb|EGT77973.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M21127]
Length = 372
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AG+
Sbjct: 8 DHKFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGDN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI A + KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIDAGIVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVVADDPSLNVRWNEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|432848191|ref|ZP_20080063.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE144]
gi|431402540|gb|ELG85852.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE144]
Length = 367
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARLDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|238893351|ref|YP_002918085.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|262042437|ref|ZP_06015597.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|402782150|ref|YP_006637696.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|425078121|ref|ZP_18481224.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425080125|ref|ZP_18483222.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425088754|ref|ZP_18491847.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090247|ref|ZP_18493332.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428933373|ref|ZP_19006927.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae JHCK1]
gi|238545667|dbj|BAH62018.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259040212|gb|EEW41323.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|402543012|gb|AFQ67161.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405591100|gb|EKB64613.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601846|gb|EKB74999.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405607050|gb|EKB80020.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405613931|gb|EKB86652.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|426305394|gb|EKV67517.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae JHCK1]
Length = 367
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|398948095|ref|ZP_10672575.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM33]
gi|398161103|gb|EJM49346.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM33]
Length = 377
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHFMARALELARKGHYTTHPNPRVGCVIVQDGQIVGEGWHERAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGESRKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|373858065|ref|ZP_09600804.1| riboflavin biosynthesis protein RibD [Bacillus sp. 1NLA3E]
gi|372452287|gb|EHP25759.1| riboflavin biosynthesis protein RibD [Bacillus sp. 1NLA3E]
Length = 363
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 166/294 (56%), Gaps = 13/294 (4%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D ++M +ELA A G T+PNP+VG +IVKDG +VG G H KAG+PHAEV A R AG
Sbjct: 2 KTDQYFMNLALELAATAKGKTNPNPLVGAIIVKDGMVVGSGLHRKAGEPHAEVHAFRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+ AT YV+LEPC++YG+TPPC E + + V++VV+ M DPNP+V +G++ L++AGI
Sbjct: 62 EHAKDATLYVTLEPCSYYGKTPPCAELVKNSGVRRVVIAMKDPNPLVAGRGIKILKEAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
++ VG+ ++ + LNE FIH ++T PF + ++++G + G +E+
Sbjct: 122 EIEVGIMEQEARLLNERFIHNMMTSTPFIISKVAMTLDGKLAAYNGHSKWVTGSEARESV 181
Query: 251 SQLLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
QL E DAI++ + + P RII SN P+ L++ S ++
Sbjct: 182 HQLRDETDAIMVGIGTVLADNPQLTTRLPEGGKNPIRIILDSNLRMPVD-ANLTDTSEAQ 240
Query: 309 VIVFTDGEITVE--PDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVD 356
+ T E + KG++ + ++ L+L VL + G +L++
Sbjct: 241 TWIVTREEADQNKLALLKEKGVQFIFTNKDDTGLDLHLVLQRLFERGVTDILLE 294
>gi|444917686|ref|ZP_21237778.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Cystobacter
fuscus DSM 2262]
gi|444710737|gb|ELW51704.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Cystobacter
fuscus DSM 2262]
Length = 391
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 180/338 (53%), Gaps = 31/338 (9%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
F+MR +E A K +G TSPNP+VG V+VK G+I+ G+H +AG HAEV AL AG A
Sbjct: 30 FFMRLALEEAAKGLGRTSPNPVVGAVLVKGGRIIARGYHRRAGTAHAEVVALEAAGAKAR 89
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GA Y +LEPC+HYGRTPPC++ALI A V++V+ DPNP VN KG+ RLR AG++V
Sbjct: 90 GADLYTTLEPCDHYGRTPPCSQALIDAGVRRVITASSDPNPKVNGKGVARLRRAGVEVLT 149
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLL 254
GV + +LN F + TG PF TL+ ++++G + G+ +G + +L
Sbjct: 150 GVLKDEADQLNRPFFKAMRTGLPFVTLKAAVTLDGKLATATGDSRWVTGEQARAWVHRLR 209
Query: 255 QEYDAIILSASSTKK------YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
+ D I++ A++ ++ +P D P R++ S+ P + ++ S ++
Sbjct: 210 DQVDVILVGATTARRDNPQLTTRLPGGGGKD---PVRVVVDSHLRLPSTLQVFTQRSPAR 266
Query: 309 VIVFTDGEITVE--PDMGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGNYG 362
+V T E + + G + L + ++L+A++ G VLV+ G
Sbjct: 267 TVVATLEEPSARKAKRLLATGTDVWQLPEKQGRVDLEALMRRLAREGLNHVLVE-----G 321
Query: 363 DLEM---LLKEGIEQNLLQKIVVEVLP----VWNGSDG 393
EM L+E + LL + +++ W+GS G
Sbjct: 322 GAEMYGSFLREELADELLLFVAPKLIGGEGLSWSGSLG 359
>gi|398891069|ref|ZP_10644509.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM55]
gi|398187304|gb|EJM74648.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM55]
Length = 377
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHFMARALELARKGHYTTHPNPRVGCVIVQDGQIVGEGWHVRAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGTAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|389572237|ref|ZP_10162323.1| riboflavin biosynthesis protein RibD [Bacillus sp. M 2-6]
gi|388428081|gb|EIL85880.1| riboflavin biosynthesis protein RibD [Bacillus sp. M 2-6]
Length = 360
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 189/357 (52%), Gaps = 17/357 (4%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
KDD FYM+ + A G TSPNP+VG VIV+ G+IVG G H KAG+PHAE+ ALR AG
Sbjct: 2 KDDVFYMKLAIANAKAMKGQTSPNPLVGAVIVQSGEIVGIGAHMKAGEPHAEIHALRMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GA YV+LEPC H+G+T PCTEA+I + VKKV++ DPNP+V KG+ L+ AGI
Sbjct: 62 EKAKGADMYVTLEPCTHHGKTGPCTEAIISSGVKKVLIATQDPNPVVAGKGIAFLKKAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV--LDQLGEGVA--ESGGYY 250
+V G+ + RLN F H + T P+ L+ +S++G + DQ + + E+
Sbjct: 122 EVEQGICKQEADRLNAPFFHLMQTNLPYVILKSAISIDGKIATADQESKWITGIEARTEV 181
Query: 251 SQLLQEYDAIILSASSTKKYSIPASQEPDAN-QPFRIITVSNHASPIRIPGLSEESSSKV 309
+L QE DA++ + + + N QP R+I S P+ L++ + +
Sbjct: 182 QRLRQEADAVLTGVETIIQDDAGLIVKDSFNHQPIRVILDSTLRIPLHAKCLTDHRAETI 241
Query: 310 IVFT-DGEITVEPDMGTKGIE---TVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
I + D + + KG + T H+ +L+ VL SVLV+ G+
Sbjct: 242 ICTSQDYDHQKYQQLIQKGHQVFVTSGEHRTDLQDVLHMLKKRSVMSVLVEAGGSVS--- 298
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIV 422
+E +L+ + V+ + P+ G G + T G + + K ++P S+V
Sbjct: 299 ---ASFLEASLVNEAVIYMAPLLIG--GKDAPTFFEGEGVKKLKKAIRPADIEYSMV 350
>gi|359446256|ref|ZP_09235952.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20439]
gi|358039939|dbj|GAA72201.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20439]
Length = 375
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 185/345 (53%), Gaps = 30/345 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+DD YM R +ELA K +T+PNP VGCV+VK+ K++GEGFH AGQ HAEV AL AG
Sbjct: 9 EDDKRYMARAIELAKKGRFTTTPNPNVGCVLVKNNKVIGEGFHQLAGQGHAEVNALAMAG 68
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+HYGRTPPC E L A VKKV+ M+D NP V KGL+ L DAGI
Sbjct: 69 ENAKGATAYVTLEPCSHYGRTPPCAEGLKAAGVKKVIAAMVDSNPQVAGKGLKILADAGI 128
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V G+ + + LN F R+ G PF T + S++G + G+ +G Q +
Sbjct: 129 EVAYGLLEAQARALNLGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDV 188
Query: 255 QEYDA---IILSASST----------KKYSIPASQEPD--ANQPFRIITVSNHASPIRIP 299
Q Y A IL+ + T + +P S D QP R++ S + P
Sbjct: 189 QLYRAQSCAILTGADTVLMDDAKLNVRPEELPYSLPTDLPLRQPVRVVIDSQNR---LTP 245
Query: 300 GLSEES-SSKVIVFTDG-EITVEPDMGTKGIET-VNLHQLNLKAVLDYCYSHGFCSVLVD 356
L+ S S+VI+FT + + + K IE N ++++L AVL F +V ++
Sbjct: 246 DLALFSIQSEVIIFTTKVDKSHQWPHFVKQIEVPENNNKVDLLAVLHTLAQLQFNNVWLE 305
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN 401
L + E +L+ + V + P GSD +LLN
Sbjct: 306 AGAT------LAGKMTELDLIDEFVFYIAPKLMGSDA---KSLLN 341
>gi|68249531|ref|YP_248643.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
86-028NP]
gi|68057730|gb|AAX87983.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae
86-028NP]
Length = 372
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 141/234 (60%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA-----SQEPD----------ANQPFRIITVSNH 292
A +LS S+T P+ + P+ QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVLADDPSLNVRWDEFPENLKTEYKKEWLRQPVRVILDSQH 241
>gi|308070849|ref|YP_003872454.1| riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681]
gi|305860128|gb|ADM71916.1| Riboflavin biosynthesis protein ribD [Paenibacillus polymyxa E681]
Length = 366
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 181/318 (56%), Gaps = 17/318 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMR +E A A G T PNP+VG VIV +G+IVG G H K G+PHAE+ ALR AGE A+G
Sbjct: 7 YMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMAGEHAQG 66
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+H+GRT PC EA++KA +++VV+ LDPNP+V+ +G++ L+DAGI+V VG
Sbjct: 67 ATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQILKDAGIEVIVG 126
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
V ++ R+NE F IV+ +PF T++ ++++G + + E +E+ L+
Sbjct: 127 VCEQESIRMNEVFNQYIVSKRPFITIKSAVTLDGKIATRTSESKWITSEAAREDVHRLRN 186
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI---- 310
IL T + P ++ P+ P RII S P+ +++ + I
Sbjct: 187 EHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSKLRIPLDARVITDGEAPTWIFTGR 246
Query: 311 VFTDGEITVEPDMGTKGIETV--NLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
V+ +G+ + +G K T N ++NL +LD + SV V+ G E +
Sbjct: 247 VYDEGKRSQLEQLGVKVYTTQDENSERVNLPQMLDILGAAEVSSVFVE-----GGAE-VN 300
Query: 369 KEGIEQNLLQKIVVEVLP 386
++Q L ++V+ + P
Sbjct: 301 ASFVQQGLADRLVLYIAP 318
>gi|432390341|ref|ZP_19633205.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE21]
gi|430922698|gb|ELC43445.1| riboflavin biosynthesis protein RibD [Escherichia coli KTE21]
Length = 367
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|37679045|ref|NP_933654.1| pyrimidine reductase [Vibrio vulnificus YJ016]
gi|37197787|dbj|BAC93625.1| pyrimidine reductase [Vibrio vulnificus YJ016]
Length = 368
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 180/346 (52%), Gaps = 36/346 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCV+++DG+IVGEGFH +AG+PHAEV A+R A +
Sbjct: 8 DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGEPHAEVHAMRMAADK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA V +VV M DPNP V +G LR+AGI+V
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFAMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+VG+ + LN AFI R+ TG PF L+ S++G G+ + + +Q
Sbjct: 128 SVGLLQAEAEALNPAFIKRMKTGMPFVQLKMAASLDGQTALANGKSQWITSPQARRDVQR 187
Query: 257 YDA---IILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNHASPIRI 298
+ A ILS S T + +P+S + QP R++ + A
Sbjct: 188 FRAQSGAILSTSKTVLADNASLNVRWSELPSSVQRALPQEQLRQPTRVV-LDRQAELSPE 246
Query: 299 PGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
L + ++IV G++ D + +NL QL + +H + L
Sbjct: 247 LKLYQTEGERLIVGPKGDLPAPLDEHGQ----INLPQLFTQLSQTQSINHLWVEAGATLA 302
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG 404
I+ L+ +++V + P GSDG L+ +LG
Sbjct: 303 AGL----------IKHQLVDELIVYLAPKLMGSDG---RGLMGALG 335
>gi|419839651|ref|ZP_14363057.1| riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
HK386]
gi|386909229|gb|EIJ73905.1| riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
HK386]
Length = 372
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+ +IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DRKFMQRALDLAAKGQYTTTPNPSVGCVLVKNDEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVLADDPSLNVRWDEFPENLQTEYKKEDLRQPVRVILDSQH 241
>gi|386815128|ref|ZP_10102346.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiothrix
nivea DSM 5205]
gi|386419704|gb|EIJ33539.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Thiothrix
nivea DSM 5205]
Length = 371
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 177/338 (52%), Gaps = 36/338 (10%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD M R ++LA + + +T PNP VGCVIV++ +IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 9 DDHRCMARALQLARRGLYTTHPNPRVGCVIVRNVQIVGEGWHERAGEPHAEVHALRRAGE 68
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC AL++A VK+VV M+DPNP+V GL+ L+ AGI+
Sbjct: 69 AAHGATAYVTLEPCSHHGRTPPCANALVQAGVKRVVTAMVDPNPLVAGNGLKLLQVAGIE 128
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---Q 252
G+ + + LN FI R+ +P+ L+ +S++G + GE V +G Q
Sbjct: 129 TASGLLESEARALNPGFISRMERNRPYIRLKMAMSLDGRTAMESGESVWVTGDAARRDVQ 188
Query: 253 LLQEYDAIILSASSTKKYSIPASQ----------EPDANQPFRIITVSNHASP-----IR 297
L+ IL+ T P+ + + QP R++ S P +
Sbjct: 189 FLRAQAGAILTGIGTVLADDPSLNVRLTAEALGIQGEVRQPIRVVLDSELRFPPDARLLN 248
Query: 298 IPGLSEESSSKVIVFT----DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSV 353
IPG + +++T D +I +G K + + +L+L V+ G V
Sbjct: 249 IPG-------ETLIYTCSANDDKIAQLEQVGAK-VRRFDAKKLHLSEVMTALVEDGITEV 300
Query: 354 LVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGS 391
V+ L +EQ ++V+ + P GS
Sbjct: 301 HVEAGAT------LAGALVEQGFADELVIYMAPHLMGS 332
>gi|387823681|ref|YP_005823152.1| Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Francisella cf. novicida 3523]
gi|328675280|gb|AEB27955.1| Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Francisella cf. novicida 3523]
Length = 355
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 181/326 (55%), Gaps = 24/326 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL G+
Sbjct: 5 DKYYMQQALSLANRGRLTVSPNPMVGCIIVKNGTIISEGWHETVGKAHAEVHALTKVGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC H+GRTPPCT+ LIKA +KKVV+ LDPNP V KG+++L+DAGI V
Sbjct: 65 AKGATVYVTLEPCCHHGRTPPCTDTLIKAGIKKVVIATLDPNPKVAGKGVKKLKDAGITV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL--DQLGEGVAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G V + + ++ + + Q
Sbjct: 125 EVGLLEKQAQELNKIFFHYQKTKKPFVYAKWAMSLDGKVAVNNDDSKKISSHQAFINTHQ 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPIRIPGLSEESSSKV 309
L DAI++ + + + N+ P R I +SNH + I + S
Sbjct: 185 LRNICDAILIGKQTLTDDNPSLDVRININKIKHPTRFI-LSNHLTTINHNWQVLDQSHAK 243
Query: 310 IVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFC-SVLVDLRGNYGDLEMLL 368
+F +I+ + + TK L+QL ++ L + C + L++ GN G +L+
Sbjct: 244 TIFICSKISAQ--IATK------LNQLGIEYWLLPQSQNQVCLNTLLEKMGNIGITSLLV 295
Query: 369 KEG-------IEQNLLQKIVVEVLPV 387
+ G I Q L+ + + PV
Sbjct: 296 EGGSKTLNSFINQKLVNEFYTYLAPV 321
>gi|261876153|ref|YP_695000.2| riboflavin biosynthesis protein RibD [Clostridium perfringens ATCC
13124]
gi|255529887|gb|ABG83871.2| riboflavin biosynthesis protein RibD [Clostridium perfringens ATCC
13124]
Length = 371
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 178/307 (57%), Gaps = 17/307 (5%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
++ D D F+M++ +ELA K G +PNP+VG VIVK G+I+G+G+H G HAE+ A
Sbjct: 1 MEGEDNLDEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGNHAEINA 60
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
+ + + EGAT YV+LEPC HYG+TPPC EA+IK K K+VVVG LD NP+V+ K ++ L
Sbjct: 61 INSSIKSTEGATIYVTLEPCCHYGKTPPCIEAIIKNKFKRVVVGTLDQNPLVSGKSIKIL 120
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----E 245
R++GI+V VGV ++ C RLNE F I +PF L++ ++++G + + + +
Sbjct: 121 RESGIEVKVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKEFKSKWITNRK 180
Query: 246 SGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPG 300
S + L +Y +I++ ++ K + + N+ FRI+ S P+
Sbjct: 181 SREFVHSLRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEI 240
Query: 301 LSEESSSKVIVFTDG---EITVE--PDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSV 353
L ++ SK ++FT +I E D+G + IE VNL + +N+ VL+ SV
Sbjct: 241 LKNQNESKTLIFTTNKKDKIKNEKLKDIGIEVIE-VNLDEGKININQVLECLKEKNIDSV 299
Query: 354 LVDLRGN 360
L++ GN
Sbjct: 300 LIEGGGN 306
>gi|27363797|ref|NP_759325.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6]
gi|27359914|gb|AAO08852.1| riboflavin biosynthesis protein RibD [Vibrio vulnificus CMCP6]
Length = 368
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 114/158 (72%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA + + +T+PNP VGCV+++DG+IVGEGFH +AG+PHAEV A+R AG+
Sbjct: 8 DRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGEPHAEVHAMRMAGDK 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA V +VV M DPNP V +G LR+AGI+V
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFAMLREAGIEV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGH 234
+VG+ + LN AFI R+ G PF L+ S++G
Sbjct: 128 SVGLLQAEAEALNPAFIKRMKMGMPFVQLKMAASLDGQ 165
>gi|218549926|ref|YP_002383717.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia fergusonii ATCC 35469]
gi|218357467|emb|CAQ90106.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Escherichia fergusonii ATCC 35469]
Length = 367
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 131/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIATGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|334123200|ref|ZP_08497229.1| riboflavin biosynthesis protein RibD [Enterobacter hormaechei ATCC
49162]
gi|333391074|gb|EGK62197.1| riboflavin biosynthesis protein RibD [Enterobacter hormaechei ATCC
49162]
Length = 367
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 138/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + +N+ F+ R+ TG PF L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAEAINKGFLKRMRTGFPFIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVSNH 292
L+ IL++S T PA + P N QP RII S +
Sbjct: 183 LRAQSHAILTSSETVLADDPAMTVRWDELNADTQALYPQENLRQPLRIIIDSQN 236
>gi|88801234|ref|ZP_01116773.1| riboflavin biosynthesis protein [Reinekea blandensis MED297]
gi|88776020|gb|EAR07256.1| riboflavin biosynthesis protein [Reinekea sp. MED297]
Length = 366
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 166/320 (51%), Gaps = 20/320 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
+M + ++LA + +T+PNP VGCVIV+DG++VG G+H KAG PHAEV AL +AG A G
Sbjct: 11 WMAQALKLAARGRRTTTPNPNVGCVIVRDGELVGSGYHRKAGTPHAEVHALAEAGSKARG 70
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC+HYG+TPPC +ALIKA V VV M DPNP V +GLE+LR+AGI+V G
Sbjct: 71 ATAYVTLEPCSHYGKTPPCADALIKAGVANVVCAMTDPNPQVAGQGLEKLRNAGIEVISG 130
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA 259
V + +RLN F+ R+ TG+P+ + S++G G+ +G Q +Q A
Sbjct: 131 VLNAEAERLNRGFLKRMRTGRPWLVAKMAASLDGGTALANGDSQWITGPEARQDVQSGRA 190
Query: 260 IILSASSTKKYSIPASQEPDAN--------QPFRIITVSNHASPIRIPGLSEESSSKVIV 311
S + + P N QP RII + +P+ ++ + +I
Sbjct: 191 D--SCAVVTGVETVVADNPSLNVRLDGADRQPVRIILDTQARTPVPSTIVTLPGRTVIIH 248
Query: 312 FTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
+ G E V + ++L A L +C F V ++ L
Sbjct: 249 GAQANPLSLERLQAAGFELVEMATANDHIDLPAFLSWCGQQAFNRVWLEAGAT------L 302
Query: 368 LKEGIEQNLLQKIVVEVLPV 387
EQ LL ++ + P+
Sbjct: 303 TGAFAEQGLLDELWLYQAPI 322
>gi|398886460|ref|ZP_10641337.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM60]
gi|398189775|gb|EJM77041.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM60]
Length = 377
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCVIVKDG+IVGEG+H + G+PHAEV ALR AG+
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVIVKDGQIVGEGWHERTGEPHAEVHALRAAGDK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A + +VV M DPNP V +G++RL AGI +
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGLARVVAAMQDPNPSVAGRGMQRLAQAGIAI 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|229592849|ref|YP_002874968.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
SBW25]
gi|229364715|emb|CAY52681.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase]
[Pseudomonas fluorescens SBW25]
Length = 369
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG++VGEG+H + G+PHAEV ALR AG+
Sbjct: 3 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHAEVHALRAAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYG TPPC +AL+ A + +VV M DPNP V +G++RL AGIDV
Sbjct: 63 ARGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQRLAQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 123 RSGVLESEARALNRGFLKRMEQGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 182
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 183 LRAEASVVLTGADT 196
>gi|254372095|ref|ZP_04987588.1| hypothetical protein FTCG_01236 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569826|gb|EDN35480.1| hypothetical protein FTCG_01236 [Francisella novicida GA99-3549]
Length = 355
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 181/326 (55%), Gaps = 24/326 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL G+
Sbjct: 5 DKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGEAHAEVHALIKVGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPCT+ +IKA +KKV++ LDPNP V KG+ERL++AGI V
Sbjct: 65 AKGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G + G+ ++ + + +
Sbjct: 125 EVGLLEKQAQELNKIFFHYQTTKKPFVYAKWAMSLDGKIAVNDGDSKKISSHQAFVNTHE 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPI----RIPGLSEES 305
L DAI++ + + + N+ P R I ++NH + I R+ L +
Sbjct: 185 LRNICDAILIGKQTLIDDNPSLDVRININKIKHPTRFI-LANHMTTIDHNWRV--LDQRH 241
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ + V + V + GIE L HQ+ L +L+ + G S+LV+ GN
Sbjct: 242 AKTIFVCSKISAQVATKLNQLGIEYWLLPQSQHQVCLDTLLEKMGNIGITSLLVE-GGN- 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLPV 387
L I Q L+ + + PV
Sbjct: 300 ----KTLNSFINQKLVNEFYTYLAPV 321
>gi|325928452|ref|ZP_08189643.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
perforans 91-118]
gi|325541169|gb|EGD12720.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Xanthomonas
perforans 91-118]
Length = 369
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/362 (34%), Positives = 180/362 (49%), Gaps = 23/362 (6%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI A V +VV M DP P VN G LR+AGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGFALLREAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + LN+ F+ R+ G+P+ ++ S++G GE +G Q
Sbjct: 131 VLSGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGESKWITGSRARADGQ 190
Query: 256 EYDA---IILSASSTKKYSIPA-----SQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
+ A IL+ + T P+ ++ P R++ + + + + S
Sbjct: 191 RWRARAGAILTGAGTVMADDPSMTVRLGEDMPVVPPLRVVLDAGLRT---LACRNIRQGS 247
Query: 308 KVIVFTDGEITVEPDMGTKGIETVNLH--QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
++ GE P + V L + +L AVL G V V+
Sbjct: 248 APTLYLHGENVAAPSLDDAQFLAVPLQAGRFDLPAVLALLAERGINEVHVEAGA------ 301
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL---LNSLGKRLILKNLQPKMSSQSIV 422
ML ++ L+ +++V + PV G D P + ++ +R L+ L + Q +
Sbjct: 302 MLSGALLQAGLVDELLVYMAPVLLG-DTARPLVAGLGIETMAQRHALQLLDVRQLGQDLR 360
Query: 423 LE 424
L
Sbjct: 361 LR 362
>gi|21230168|ref|NP_636085.1| bifunctional riboflavin-specific deaminase/5-amino-6-uracil
reductase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769842|ref|YP_244604.1| bifunctional riboflavin-specific deaminase/5-amino-6-uracil
reductase [Xanthomonas campestris pv. campestris str.
8004]
gi|188993059|ref|YP_001905069.1| Riboflavin biosynthesis protein RibD
(Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase) [Xanthomonas campestris pv. campestris str.
B100]
gi|21111703|gb|AAM40009.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66575174|gb|AAY50584.1| riboflavin-specific deaminase/5-amino-6-uracil reductase
[Xanthomonas campestris pv. campestris str. 8004]
gi|167734819|emb|CAP53029.1| Riboflavin biosynthesis protein RibD
(Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase) [Xanthomonas campestris pv. campestris]
Length = 364
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D+ +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 6 DNHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGACVGEGFHQRAGGPHAEVFALRAAGE 65
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC HYGRTPPC ALI A V +VV M DP P VN G LRDAGI
Sbjct: 66 QARGATAYVTLEPCAHYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGFTLLRDAGIQ 125
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + + LN+ F+ R+ G+P+ ++ S++G GE +G +Q
Sbjct: 126 VHSGVMEAQARALNQGFLSRVERGRPWVRVKLGASLDGRTAMASGESKWITGADARADVQ 185
Query: 256 EYDA---IILSASST 267
+ A +IL+ + T
Sbjct: 186 RWRARAGVILTGAGT 200
>gi|365104924|ref|ZP_09334316.1| riboflavin biosynthesis protein RibD [Citrobacter freundii
4_7_47CFAA]
gi|363643865|gb|EHL83169.1| riboflavin biosynthesis protein RibD [Citrobacter freundii
4_7_47CFAA]
Length = 367
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA AYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AQGAIAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEVEQLNKGFLKRMRTGFPYLQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ IL++SST
Sbjct: 183 LRAQSHAILTSSST 196
>gi|153811505|ref|ZP_01964173.1| hypothetical protein RUMOBE_01897 [Ruminococcus obeum ATCC 29174]
gi|317501334|ref|ZP_07959537.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
8_1_57FAA]
gi|149832246|gb|EDM87331.1| riboflavin biosynthesis protein RibD [Ruminococcus obeum ATCC
29174]
gi|316897298|gb|EFV19366.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
8_1_57FAA]
Length = 395
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 172/325 (52%), Gaps = 40/325 (12%)
Query: 68 GQVQNNDKDDGF------YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAG 121
Q +N +K +G YM R ++LA K G T+PNPMVG VIVKDGKI+GEG+H K G
Sbjct: 8 AQAKNRNKKEGIEMTDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYG 67
Query: 122 QPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIV 181
+ HAE A+ E AEGA YV+LEPC H+G+TPPCTEA+I+ K++KVV+G DPNP V
Sbjct: 68 ELHAERNAIASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKV 127
Query: 182 NSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
KG++ LR+AG+ V E C +LN F H I T P+ ++Y ++++G + + G
Sbjct: 128 AGKGVQMLREAGVTVVEDFMREECDQLNPVFFHYITTKTPYVVMKYAMTLDGKIATKTGA 187
Query: 242 GVAESGGYYSQLLQ----EYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIR 297
+G + +Q +Y I+ + A+ P + V SP+R
Sbjct: 188 SKWITGESARKEVQHMRHQYMGIMAGIGTVL-----------ADDPMLNVRVEGWKSPVR 236
Query: 298 I---------PG----LSEESSSKVIVFTDGEITVE--PDMGTKGIETV----NLHQLNL 338
I PG S E ++ + + + E + T G+ET+ +Q++L
Sbjct: 237 IVCDSKLRIPPGSQIVKSAEKYRTIVAYAEQKNAKEKIKILHTMGVETIYCPDEKNQIDL 296
Query: 339 KAVLDYCYSHGFCSVLVDLRGNYGD 363
K ++ + G S+L++ G D
Sbjct: 297 KKLMADLGNRGIDSILLEGGGTLND 321
>gi|78046354|ref|YP_362529.1| riboflavin biosynthesis diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase RibD [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78034784|emb|CAJ22429.1| riboflavin biosynthesis protein RibD
(Diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-[5-phosphoribosylamino]uracil
reductase) [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 369
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI A V +VV M DP P VN G LR+AGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGFALLREAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + LN+ F+ R+ G+P+ ++ S++G GE +G + Q
Sbjct: 131 VLSGVMHAQARTLNQGFLSRVERGRPWLRVKLGTSLDGRTALASGESKWITGSHARADGQ 190
Query: 256 EYDA---IILSASSTKKYSIPA 274
+ A IL+ + T P+
Sbjct: 191 RWRARAGAILTGAGTVMADDPS 212
>gi|300721779|ref|YP_003711057.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Xenorhabdus nematophila ATCC 19061]
gi|297628274|emb|CBJ88835.1| bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase
(N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil
reductase [Xenorhabdus nematophila ATCC 19061]
Length = 369
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 144/238 (60%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +TSPNP VGCVIVKD +IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 5 DEIYMSRALELAYQGRFTTSPNPNVGCVIVKDEEIVGEGFHLRAGEPHAEVHALRMAGEK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+G+TPPC +ALI A + +VVV M DPNP V +GL +L+ AGI V
Sbjct: 65 AKGATAYVTLEPCSHHGKTPPCADALIAAGLSRVVVAMQDPNPQVAGRGLYKLQQAGIAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + + LN+ F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 125 EHGLMMDQAESLNKGFLKRMRTGFPYLQLKLGSSLDGRTALSSGESQWITSPQARQDVQT 184
Query: 257 YDA---IILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
A ILS+S+T P+ E DA QP RIIT S N +P
Sbjct: 185 LRAQCSAILSSSATVLADDPSMTVRWNELDAETQSVYPEERLRQPIRIITDSQNRVTP 242
>gi|268592074|ref|ZP_06126295.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM
1131]
gi|291312469|gb|EFE52922.1| riboflavin biosynthesis protein RibD [Providencia rettgeri DSM
1131]
Length = 371
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 137/236 (58%), Gaps = 19/236 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R ELA K +TSPNP VGCVIV+DG IVGEG+H KAG+PHAEV ALR AG
Sbjct: 3 EQDNMYMARAFELARKGRFTTSPNPNVGCVIVRDGTIVGEGYHQKAGEPHAEVHALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A+GATAYV+LEPC+H+GRTPPC EALIKA V +VV M DPNP V +GL L AGI
Sbjct: 63 DKAQGATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVAAMQDPNPQVAGRGLYMLSQAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ V + N F+ R+ TG P+ L+ S++G + GE + +
Sbjct: 123 ETRSNVLLNDAEAANRGFLKRMRTGFPYIQLKLAASLDGKTALESGESKWITSSAARKDV 182
Query: 252 QLLQEYDAIILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
Q L+ + ILS SST + +P+ E QP RI+ + NH
Sbjct: 183 QALRAEASAILSTSSTVVADDPSLTVRWNELPSDIQQVYPENQVRQPIRIV-LDNH 237
>gi|343519298|ref|ZP_08756283.1| riboflavin biosynthesis protein RibD [Haemophilus pittmaniae HK 85]
gi|343393064|gb|EGV05624.1| riboflavin biosynthesis protein RibD [Haemophilus pittmaniae HK 85]
Length = 375
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 135/234 (57%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M++ + LA + + +PNP VGCV+VKDG IVG GFH K G PHAE AL DAG
Sbjct: 10 DHNFMQQAIALAKQGQYTATPNPAVGCVLVKDGAIVGRGFHAKPGLPHAERMALADAGVA 69
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC HYGRTPPC LI+A V++VV MLDPNP+V KG++ L++AGI+
Sbjct: 70 AQGATAYVTLEPCAHYGRTPPCALGLIEAGVRRVVAAMLDPNPLVAGKGIQMLQEAGIEC 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ E + LN F+ R+ +PF L+ +S++G GE +G +Q
Sbjct: 130 QVGLLGEQAEALNRGFLSRMRYARPFVQLKLAMSLDGRTAMANGESKWITGTAARADVQH 189
Query: 257 YDAI---ILSASSTKKYSIPASQ---------------EPDANQPFRIITVSNH 292
+ A+ ILS S+T PA E QP R+I S H
Sbjct: 190 HRAMVSAILSTSATVLADDPALNVRWADFPPELRECYPESQVRQPVRVILDSQH 243
>gi|423118930|ref|ZP_17106614.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5246]
gi|376399576|gb|EHT12190.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5246]
Length = 367
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 142/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMGEAEALNKGFLKRMRTGFPYIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP 295
L+ IL++S+T PA +E DA+ QP RI+ S N +P
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWEELDADIRACYPQENLRQPLRIVIDSHNRVTP 240
>gi|300715569|ref|YP_003740372.1| riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661]
gi|299061405|emb|CAX58515.1| Riboflavin biosynthesis protein RibD [Erwinia billingiae Eb661]
Length = 368
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/238 (43%), Positives = 141/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA + +T+PNP VGCVIV+DG +VGEG+H +AG+PHAEV ALR AG+
Sbjct: 3 DEIWMARALELARRGRFTTTPNPNVGCVIVRDGVMVGEGYHFRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +V+ M DPNP V +GL RL+ AGI+V
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVIAAMQDPNPEVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMANGESQWITSAEARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIP---------------ASQEPDANQPFRIITVS-NHASP 295
L+ + ILS S+T P A E D QP R++ S N +P
Sbjct: 183 LRAQSSAILSTSATVLADNPSLTVRWQDLAADTQAAYAEADLRQPVRVVIDSQNQVTP 240
>gi|359436818|ref|ZP_09226900.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20311]
gi|358028514|dbj|GAA63149.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20311]
Length = 375
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 185/345 (53%), Gaps = 30/345 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+DD YM R +ELA K +T+PNP VGCV+VK+ K++GEGFH AGQ HAEV AL AG
Sbjct: 9 EDDKRYMARAIELAKKGRFTTTPNPNVGCVLVKNNKVIGEGFHQLAGQGHAEVNALAMAG 68
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+HYGRTPPC E L A +KKV+ M+D NP V KGL+ L DAGI
Sbjct: 69 ENAKGATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDSNPQVAGKGLKILADAGI 128
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+V G+ + + LN F R+ G PF T + S++G + G+ +G Q +
Sbjct: 129 EVAYGLLEAQARALNLGFFKRMEQGLPFVTCKMAASIDGKTALKNGQSKWITGPAARQDV 188
Query: 255 QEYDA---IILSASST----------KKYSIPASQEPD--ANQPFRIITVSNHASPIRIP 299
Q Y A IL+ + T + +P S D QP R++ S + P
Sbjct: 189 QLYRAQNCAILTGADTVLMDDAKLNVRPEELPYSLPTDLPLRQPVRVVIDSQNR---LTP 245
Query: 300 GLSEES-SSKVIVFTDG-EITVEPDMGTKGIET-VNLHQLNLKAVLDYCYSHGFCSVLVD 356
L+ S S+VI+FT + + + K IE N ++++L AVL F +V ++
Sbjct: 246 DLALFSIQSEVIIFTTKVDKSHQWPHFVKQIEVPENNNKVDLLAVLHTLAQLQFNNVWLE 305
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLN 401
L + E +L+ + V + P GSD +LLN
Sbjct: 306 AGAT------LAGKMTELDLIDEFVFYIAPKLMGSDA---KSLLN 341
>gi|430750124|ref|YP_007213032.1| riboflavin biosynthesis protein RibD [Thermobacillus composti KWC4]
gi|430734089|gb|AGA58034.1| riboflavin biosynthesis protein RibD [Thermobacillus composti KWC4]
Length = 372
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 176/337 (52%), Gaps = 33/337 (9%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +YMR +ELA KA G T NP+VGCVIVKDG+IVG G H + G+ HAE+ AL+ AGE
Sbjct: 6 DDEYYMRLALELAAKARGQTGVNPVVGCVIVKDGRIVGLGSHLRRGEAHAEIHALKMAGE 65
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GAT YV+LEPC+HYGRTPPC + LI+A V +VV DPNP V+ GL +LR AGI+
Sbjct: 66 EARGATVYVTLEPCSHYGRTPPCADRLIEAGVGRVVAAATDPNPKVSGTGLAKLRAAGIE 125
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYS 251
GV + ++LNEAF I TG PF TL+ +++G + G+ ES
Sbjct: 126 TVSGVLEAESRKLNEAFEKYIRTGLPFVTLKAGATLDGRLAAGSGDSRWVTGEESRAAVH 185
Query: 252 QLLQEYDAIILSASSTKKY--SIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L +DAI++ A + K S+ P RI+ S P+ +
Sbjct: 186 TLRHWHDAIMIGAGTALKDDPSLTTRTPVPGLHPVRIVVDSQLRLPLHLK---------- 235
Query: 310 IVFTDGEITVEPDMGTKGIETVNLHQLNLKAV---LDYCYSHGFCSVLVDLRGNYGDLEM 366
+FTDG+ P + ++ + + L+A + C + G L D G+ E+
Sbjct: 236 -LFTDGQ---APTIVLAAVDADSGRRRALEAAGAEVISCAAQGGRVDLRDAMRKLGEREI 291
Query: 367 --LLKEG--------IEQNLLQKIVVEVLPVWNGSDG 393
+L EG ++ L+ KI V P GS G
Sbjct: 292 GSVLLEGGGRLNGAMLQAGLVDKIAVFFAPKIVGSGG 328
>gi|153814754|ref|ZP_01967422.1| hypothetical protein RUMTOR_00969 [Ruminococcus torques ATCC 27756]
gi|145847785|gb|EDK24703.1| riboflavin biosynthesis protein RibD [Ruminococcus torques ATCC
27756]
Length = 395
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 172/325 (52%), Gaps = 40/325 (12%)
Query: 68 GQVQNNDKDDGF------YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAG 121
Q +N +K +G YM R ++LA K G T+PNPMVG VIVKDGKI+GEG+H K G
Sbjct: 8 AQAKNRNKKEGIEMTDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYG 67
Query: 122 QPHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIV 181
+ HAE A+ E AEGA YV+LEPC H+G+TPPCTEA+I+ K++KVV+G DPNP V
Sbjct: 68 ELHAERNAIASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKV 127
Query: 182 NSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
KG++ LR+AG+ V E C +LN F H I T P+ ++Y ++++G + + G
Sbjct: 128 AGKGVQMLREAGVTVVEDFMREECDQLNPVFFHYITTKTPYVVMKYAMTLDGKIATKTGA 187
Query: 242 GVAESGGYYSQLLQ----EYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIR 297
+G + +Q +Y I+ + A+ P + V SP+R
Sbjct: 188 SKWITGESARKEVQHMRHQYMGIMAGIGTVL-----------ADDPMLNVRVEGWKSPVR 236
Query: 298 I---------PG----LSEESSSKVIVFTDGEITVE--PDMGTKGIETV----NLHQLNL 338
I PG S E ++ + + + E + T G+ET+ +Q++L
Sbjct: 237 IVCDSKLRIPPGSQIVKSAEKYRTIVAYAEQKNAKEKIKILHTMGVETIYCPDEKNQIDL 296
Query: 339 KAVLDYCYSHGFCSVLVDLRGNYGD 363
K ++ + G S+L++ G D
Sbjct: 297 KKLMADLGNRGIDSILLEGGGTLND 321
>gi|24374975|ref|NP_719018.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase RibD [Shewanella oneidensis MR-1]
gi|24349701|gb|AAN56462.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase RibD [Shewanella oneidensis MR-1]
Length = 381
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA K +T PNP VGCVIV D +IVGEG+H KAG+PHAEV ALR AGEL
Sbjct: 7 DNQMMSRAIQLARKGFYTTRPNPSVGCVIVNDNQIVGEGYHQKAGEPHAEVHALRMAGEL 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI V
Sbjct: 67 ARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIQV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
VG+ + LN F+ R+ +G P+ T++ S++G
Sbjct: 127 DVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDG 163
>gi|402302067|ref|ZP_10821187.1| riboflavin biosynthesis protein RibD [Selenomonas sp. FOBRC9]
gi|400381054|gb|EJP33858.1| riboflavin biosynthesis protein RibD [Selenomonas sp. FOBRC9]
Length = 358
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 159/289 (55%), Gaps = 16/289 (5%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M + LA A G TSPNP+VG VIV+DG +VG G+H AG+PHAE+ ALR AGELA GA
Sbjct: 1 MWEALHLAEFARGRTSPNPLVGAVIVRDGIVVGSGWHRAAGEPHAEIHALRMAGELARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+I A + VV + DPNP+V G+ERLR AGI+VT GV
Sbjct: 61 TLYVTLEPCSHHGRTGPCAEAVIAAGIAHVVTALSDPNPVVAGHGIERLRAAGIEVTTGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEY--- 257
E +R NE F+ +VT +PF TL+ ++++G + G +G + E+
Sbjct: 121 LSEEARRQNEVFLKWVVTKRPFVTLKTAMTLDGKTASRTGASQWITGAEARTRVHEWRDA 180
Query: 258 -DAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
DAI +L+ + +P P R++ S +P L++ ++ +I
Sbjct: 181 HDAILVGIGTVLADDPSLTVRLP---HRTGKNPVRVVLDSTARTPHDAKLLTDGAARTII 237
Query: 311 VFTDGEITVEPDMGTK-GIETVNL--HQLNLKAVLDYCYSHGFCSVLVD 356
++ + G E V ++++ A++D+ SV V+
Sbjct: 238 AVSERAAPKRTALLQACGAEVVTFGRERVDIPALMDFLGREELTSVFVE 286
>gi|388547633|ref|ZP_10150895.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. M47T1]
gi|388274233|gb|EIK93833.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. M47T1]
Length = 379
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 126/195 (64%), Gaps = 4/195 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + + +T PNP VGCVIV+DG++VGEG+H +AG+ HAEV ALR AGEL
Sbjct: 11 DARYMARAIELARRGLYTTHPNPRVGCVIVRDGQVVGEGWHVRAGEGHAEVHALRQAGEL 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A + +VV M DPNP V +GL+RL D GI+V
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGLARVVAAMQDPNPEVAGRGLKRLADVGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 131 LSGVLEGEARGLNPGFLKRMEQGVPFVRVKLAMSLDGRTAMASGESKWITGPAARSAVQR 190
Query: 257 Y----DAIILSASST 267
A++ SA S
Sbjct: 191 LRARSSAVLTSADSV 205
>gi|313894496|ref|ZP_07828060.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
158 str. F0412]
gi|313440892|gb|EFR59320.1| riboflavin biosynthesis protein RibD [Veillonella sp. oral taxon
158 str. F0412]
Length = 404
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 116/166 (69%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM+R + LA A G TSPNP+VG V+VKD I+GEG+H KAG HAEV AL AG+
Sbjct: 3 DDVAYMKRAIALAKLATGHTSPNPLVGAVVVKDNTIIGEGYHHKAGTAHAEVHALNQAGD 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPC+HYG+TPPC +I+A + KVVVG DPNP+V+ KG++ LR+A I+
Sbjct: 63 NAKGATLYVTLEPCSHYGKTPPCALRIIEAGIAKVVVGSTDPNPLVSGKGMDLLREASIE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V V E C LNE F I TGKPF T++ +S++G + G+
Sbjct: 123 VVCPVCSEECVELNEHFFTYIQTGKPFVTIKSAMSLDGKIATFTGQ 168
>gi|297517703|ref|ZP_06936089.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli OP50]
Length = 361
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 143/235 (60%), Gaps = 19/235 (8%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
++LN+ F+ R+ TG P+ L+ S++G GE + QLL+
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQ 180
Query: 258 DAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 181 SHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 235
>gi|397656292|ref|YP_006496994.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
oxytoca E718]
gi|394344901|gb|AFN31022.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Klebsiella
oxytoca E718]
Length = 367
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALKLAARGRFTTHPNPNVGCVIVKDGQIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ G+DV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGVDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|398942433|ref|ZP_10670275.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM41(2012)]
gi|398160613|gb|EJM48878.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM41(2012)]
Length = 377
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCVIV+DG+IVGEG+H + G+PHAEV ALR AG+
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHAEVHALRAAGDK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +G++RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVHAGVARVVAAMQDPNPSVAGRGMQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LNE F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|319775121|ref|YP_004137609.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3047]
gi|329122965|ref|ZP_08251536.1| riboflavin biosynthesis protein RibD [Haemophilus aegyptius ATCC
11116]
gi|317449712|emb|CBY85919.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3047]
gi|327471896|gb|EGF17336.1| riboflavin biosynthesis protein RibD [Haemophilus aegyptius ATCC
11116]
Length = 372
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNIRWDEFPENLKTEYKKEGLRQPVRVILDSQH 241
>gi|375259310|ref|YP_005018480.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca KCTC 1686]
gi|365908788|gb|AEX04241.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella oxytoca KCTC 1686]
Length = 367
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALKLAARGRFTTHPNPNVGCVIVKDGQIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ G+DV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQKEGVDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|422010071|ref|ZP_16357053.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia rettgeri Dmel1]
gi|414092244|gb|EKT53923.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia rettgeri Dmel1]
Length = 371
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 137/236 (58%), Gaps = 19/236 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R ELA K +TSPNP VGCVIV+DG IVGEG+H KAG+PHAEV ALR AG
Sbjct: 3 EQDNMYMARAFELARKGRFTTSPNPNVGCVIVRDGAIVGEGYHQKAGEPHAEVHALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL L AGI
Sbjct: 63 EKAQGATAYVTLEPCSHHGRTPPCAEALINAGVSRVVAAMQDPNPQVAGRGLYMLSQAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ V + + N F+ R+ TG P+ L+ S++G + GE + +
Sbjct: 123 ETRSNVLLDDAEAANRGFLKRMRTGFPYIQLKLAASLDGKTALESGESKWITSPAARKDV 182
Query: 252 QLLQEYDAIILSASST----------KKYSIPAS-----QEPDANQPFRIITVSNH 292
Q L+ + ILS SST + +P+ E QP RI+ + NH
Sbjct: 183 QALRAEASAILSTSSTVVADDPSLTVRWNELPSDIQQVYPESQVRQPIRIV-LDNH 237
>gi|315646375|ref|ZP_07899493.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453]
gi|315278018|gb|EFU41338.1| riboflavin biosynthesis protein RibD [Paenibacillus vortex V453]
Length = 366
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 192/365 (52%), Gaps = 23/365 (6%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D FYM ++LA +A G T NP+VGCVIVK+G + G G H + G PHAE+ AL AG
Sbjct: 5 NDEFYMSLALDLAERAQGQTGINPVVGCVIVKNGALAGVGTHLERGTPHAEIHALNMAGT 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A G+T YV+LEPC+HYG TPPC+E LI VK+VVV DPNP+V KG++ LR AGI+
Sbjct: 65 KAAGSTVYVTLEPCSHYGATPPCSERLIAEGVKRVVVACEDPNPLVAGKGIQMLRAAGIE 124
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GVAESGGYYS 251
V G+ E RLNEAFI I TG+PF TL+ +++G + + G+ ES
Sbjct: 125 VVTGILRERALRLNEAFIKFITTGQPFVTLKTASTLDGKIASKTGDSKWISSEESRELVH 184
Query: 252 QLLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L + I++ S+ S+ P RII S+ P+ +S+ ++
Sbjct: 185 TLRHRHQGIMVGVSTVIADNPSLTTRLSVGGLHPVRIIVDSSLRMPLDSHVVSDGTAPTW 244
Query: 310 IVFT----DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
I+ T +G+ T+ + G + I +++LKA + G S+L++ G
Sbjct: 245 ILTTEQADEGKRTLLEERGIQVIPCGEGPRVDLKAAIAKLGQMGISSILLEGGGT----- 299
Query: 366 MLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNPHTLLNS----LGKRLILKNLQPKMSSQS 420
L +EQ L+ +++ + P + G D P + S + + ++L L+ K +
Sbjct: 300 -LNGAMLEQKLVDRLIQFIAPKIIGGYDA--PGNFMFSGYEQMNQAIVLTGLESKRLGDN 356
Query: 421 IVLEG 425
I + G
Sbjct: 357 IYITG 361
>gi|312883784|ref|ZP_07743503.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368533|gb|EFP96066.1| riboflavin-specific deaminase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 365
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 129/195 (66%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D +M R ++LA +T+PNP VGCVIVKDG +VGEGFH +AG+PHAEV AL+ A E
Sbjct: 5 EDHTHMSRALKLAELGKYTTAPNPRVGCVIVKDGLVVGEGFHYRAGEPHAEVHALQAAKE 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GAT YV+LEPC+HYGRTPPC EALIKAKV +VV M DPN +V+ +G++ LR AGI+
Sbjct: 65 RAIGATVYVTLEPCSHYGRTPPCAEALIKAKVGRVVCAMQDPNTLVSGRGIQMLRSAGIE 124
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V VG+ ++ LN AFI + +G PF L+ S++G + G+ + Q +Q
Sbjct: 125 VDVGLLEQDALDLNRAFIKTMRSGLPFVQLKLAGSLDGQTALKNGQSQWITSSQARQDVQ 184
Query: 256 EYDA---IILSASST 267
+ A ILS S T
Sbjct: 185 AFRAQSGAILSTSKT 199
>gi|228922109|ref|ZP_04085419.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837525|gb|EEM82856.1| Riboflavin biosynthesis protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 360
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 178/317 (56%), Gaps = 19/317 (5%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ +E A G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R A E A G
Sbjct: 1 MKLALENAKAMKGQTTPNPLVGSVIVNDNRIVGVGAHMKAGEPHAEIHAIRMAEEQARGG 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV
Sbjct: 61 TIYVTLEPCSHHGRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQE 256
+E K++NE F I+T +PF ++ ++++G + L + E+ Q+ E
Sbjct: 121 CEEESKKMNEVFNKYILTKRPFVAIKSGVTLDGKIATSLSDSKWITSTEARQEVHQIRNE 180
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
AI++ A++ ++ + P+ ++ P+ P R+I S P+ ++ + + +FT
Sbjct: 181 NAAILVGANTVQEDN-PSLTTRIPNGRNPIRVILDSTLRIPMEAKVIT-DGEAPTWIFTT 238
Query: 315 GEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
E + G K T +NL +LD G S+L++ G
Sbjct: 239 SNHAAEKKKALENAGVKVFVTSGEKHINLYEMLDVLGEKGVSSLLIEGGGEVN------A 292
Query: 370 EGIEQNLLQKIVVEVLP 386
IE L+ K+++ + P
Sbjct: 293 SFIENKLIDKLILYIAP 309
>gi|386703631|ref|YP_006167478.1| Riboflavin biosynthesis protein ribD [Escherichia coli P12b]
gi|417611446|ref|ZP_12261920.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_EH250]
gi|419941416|ref|ZP_14458104.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 75]
gi|425113741|ref|ZP_18515579.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0566]
gi|345365931|gb|EGW98029.1| riboflavin biosynthesis protein RibD [Escherichia coli STEC_EH250]
gi|383101799|gb|AFG39308.1| Riboflavin biosynthesis protein ribD [Escherichia coli P12b]
gi|388400852|gb|EIL61544.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 75]
gi|408573132|gb|EKK48991.1| riboflavin biosynthesis protein RibD [Escherichia coli 8.0566]
Length = 361
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 143/235 (60%), Gaps = 19/235 (8%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
++LN+ F+ R+ TG P+ L+ S++G GE + QLL+
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQ 180
Query: 258 DAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASPI 296
IL++S+T PA + P N QP RI+ S N +P+
Sbjct: 181 SHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPV 235
>gi|392977853|ref|YP_006476441.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323786|gb|AFM58739.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 367
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 140/238 (58%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + +N+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAEAINKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASP 295
L+ IL++S T PA + P N QP RII S N +P
Sbjct: 183 LRAQSHAILTSSETVLADDPAMTVRWNELNADTQALYPQENLRQPLRIIVDSHNRVTP 240
>gi|167630209|ref|YP_001680708.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum
Ice1]
gi|167592949|gb|ABZ84697.1| riboflavin biosynthesis protein ribd [Heliobacterium modesticaldum
Ice1]
Length = 374
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 146/243 (60%), Gaps = 7/243 (2%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D +M R +ELA A+G TSPNP+VG V+VKDG+++GEG+H KAG PHAEV ALR AGE
Sbjct: 4 EDFSFMDRALELAALALGRTSPNPVVGAVVVKDGRVIGEGYHRKAGTPHAEVHALRQAGE 63
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A G T YV+LEPCNH+GRTPPCTEA+I AK+ +VV + DPNP V +G RLR+AGI+
Sbjct: 64 AACGGTLYVTLEPCNHHGRTPPCTEAIIAAKISRVVAAVADPNPQVAGQGFARLREAGIE 123
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V VGV + +N+ F + +P+ L++ ++ +G + G+ S + +
Sbjct: 124 VDVGVMADAAITINQPFFTWVTRKRPWVLLKWAMTADGKIATASGDSRWVSSPASRRKVH 183
Query: 256 EY----DAIILSASSTKKYSIPAS---QEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
++ DAI++ + + E D P RII S +P+ LS E+ +
Sbjct: 184 QWRNRLDAILVGIGTVLADDPQLTVRLAEKDCRNPIRIIVDSKARTPLTAKVLSAEAKTI 243
Query: 309 VIV 311
+ V
Sbjct: 244 IAV 246
>gi|317492964|ref|ZP_07951388.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919086|gb|EFV40421.1| riboflavin biosynthesis protein RibD [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 373
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
+ N + D FYM R ELA + +T+PNP VGCVIV + +IVGEG+H +AG+PHAEV A
Sbjct: 1 MHNQPRGDEFYMARAFELARRGRFTTTPNPNVGCVIVLNDEIVGEGYHLRAGEPHAEVHA 60
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
L AG+ A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL +L
Sbjct: 61 LHMAGDKARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPNVAGRGLFKL 120
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
+ AGIDV+ G+ + +N F+ R+ TG PF L+ S++G GE +
Sbjct: 121 QQAGIDVSHGLMMNEAEAVNRGFLKRMRTGFPFVQLKMAASLDGRTAMASGESQWITSAA 180
Query: 250 YSQLLQEYDA---IILSASST 267
Q +Q Y A ILS+S+T
Sbjct: 181 SRQDVQRYRAQSSAILSSSAT 201
>gi|342218720|ref|ZP_08711326.1| riboflavin biosynthesis protein RibD [Megasphaera sp. UPII 135-E]
gi|341589096|gb|EGS32462.1| riboflavin biosynthesis protein RibD [Megasphaera sp. UPII 135-E]
Length = 378
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 176/316 (55%), Gaps = 24/316 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YM++ ++LA A G T+PNP+VGCVIVKDGKIVG G+H KAG PHAEV+AL +AG+
Sbjct: 2 EDVEYMKKALQLAALARGYTTPNPVVGCVIVKDGKIVGTGYHQKAGTPHAEVWALEEAGD 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GAT YV+LEPC HYGRTPPC L+K KV KVV+ MLDPNP+V KG LR AGI
Sbjct: 62 AAAGATVYVTLEPCAHYGRTPPCARTLVKHKVSKVVIAMLDPNPLVAGKGAAILRQAGIA 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQ--- 252
V VG+ + LNE FI ++T PF ++ S++G + + G + + Q
Sbjct: 122 VEVGLLSQEAAYLNEVFIKNMLTQMPFIAIKLAQSLDGCIATKTGHSQWITNTWSRQQGH 181
Query: 253 -LLQEYDAIILSASS--------TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
L YD I++ ++ T + + P +QP RII S +P +++
Sbjct: 182 YLRSIYDGIVVGINTVLADNPLLTCRIKREGGKAP--HQPVRIILDSQGRTPCTSLVVTD 239
Query: 304 ESSSKVIVFTDGEITVEPDMGTK-GIETV-----NLHQLNLKAVLDYCYSHGFCSVLVD- 356
+++ +IV T + K G+ + + +++L L Y G S+LV+
Sbjct: 240 KTAQTIIVTTQRCAQERREALEKAGVRVLVAPMQDGKRVDLAKALTLLYQEGIRSLLVEG 299
Query: 357 ---LRGNYGDLEMLLK 369
+ G++ D ++ K
Sbjct: 300 GSTIHGSFFDAQLFDK 315
>gi|398798201|ref|ZP_10557502.1| riboflavin biosynthesis protein RibD [Pantoea sp. GM01]
gi|398100918|gb|EJL91146.1| riboflavin biosynthesis protein RibD [Pantoea sp. GM01]
Length = 367
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV++G+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DERYMARALELARRGRFTTTPNPNVGCVIVREGEIVGEGWHQRAGEPHAEVHALRMAGER 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 123 SHGLMMSEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMANGESQWITSAAARRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ + ILS S+T
Sbjct: 183 LRAQSSAILSTSAT 196
>gi|168216370|ref|ZP_02641995.1| riboflavin biosynthesis protein RibD [Clostridium perfringens NCTC
8239]
gi|182381291|gb|EDT78770.1| riboflavin biosynthesis protein RibD [Clostridium perfringens NCTC
8239]
Length = 365
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 175/300 (58%), Gaps = 17/300 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D F+M++ +ELA K G +PNP+VG VIVK G+I+G+G+H G HAE+ A+ + +
Sbjct: 2 DEFFMKKALELARKGEGYVNPNPLVGAVIVKGGEIIGQGYHEFFGGNHAEINAINSSIKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EGAT YV+LEPC HYG+TPPC EA+IK K K+VVVG LD NP+V+ K ++ LR++GI+V
Sbjct: 62 TEGATIYVTLEPCCHYGKTPPCIEAIIKNKFKRVVVGTLDQNPLVSGKSIKILRESGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVA----ESGGYYSQ 252
VGV ++ C RLNE F I +PF L++ ++++G + + + +S +
Sbjct: 122 KVGVLEKECIRLNEIFNFYIKENRPFIALKWAMTLDGKIATKEFKSKWITNRKSREFVHS 181
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQP-----FRIITVSNHASPIRIPGLSEESSS 307
L +Y +I++ ++ K + + N+ FRI+ S P+ L ++ S
Sbjct: 182 LRNKYSSIMVGINTVLKDNPDLRCRLNKNKELERKHFRIVLDSKLRIPLDSEILKNQNES 241
Query: 308 KVIVFTDG---EITVE--PDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLRGN 360
K ++FT +I E D+G + IE VNL + +N+ VL+ SVL++ GN
Sbjct: 242 KTLIFTTNKKDKIKNEKLKDIGIEVIE-VNLDEGKININQVLECLKEKNIDSVLIEGGGN 300
>gi|386033419|ref|YP_005953332.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae KCTC 2242]
gi|424829224|ref|ZP_18253952.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339760547|gb|AEJ96767.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae KCTC 2242]
gi|414706643|emb|CCN28347.1| riboflavin biosynthesis protein RibD [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 367
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 143/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ +GI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQSGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|118496729|ref|YP_897779.1| pyrimidine reductase/pyrimidine deaminase [Francisella novicida
U112]
gi|194324036|ref|ZP_03057811.1| riboflavin biosynthesis protein RibD [Francisella novicida FTE]
gi|208780000|ref|ZP_03247343.1| riboflavin biosynthesis protein RibD [Francisella novicida FTG]
gi|118422635|gb|ABK89025.1| pyrimidine reductase/pyrimidine deaminase [Francisella novicida
U112]
gi|194321933|gb|EDX19416.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
novicida FTE]
gi|208744004|gb|EDZ90305.1| riboflavin biosynthesis protein RibD [Francisella novicida FTG]
Length = 355
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 178/324 (54%), Gaps = 20/324 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL G+
Sbjct: 5 DKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGEAHAEVHALIKVGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPCT+ +IKA +KKV++ LDPNP V KG+ERL++AGI V
Sbjct: 65 AKGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G + G+ ++ + + +
Sbjct: 125 EVGLLEKQAQELNKIFFHYQTTKKPFVYAKWAMSLDGKIAVNDGDSKKISSHQAFVNTHE 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPI--RIPGLSEESSS 307
L DAI++ + + + N+ P R I ++NH + I L + +
Sbjct: 185 LRNICDAILIGKQTLIDDNPSLDVRININKIKHPTRFI-LANHLTTINHNWRVLDQRHAK 243
Query: 308 KVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
+ V + V + GIE L HQ+ L +L+ G S+LV+ GN
Sbjct: 244 TIFVCSKISAQVATKLNQLGIEYWLLPQSQHQVCLDTLLEKMGKIGITSLLVE-GGN--- 299
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPV 387
L I Q L+ + + PV
Sbjct: 300 --KTLNSFINQKLVNEFYTYLAPV 321
>gi|304395476|ref|ZP_07377359.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB]
gi|304356770|gb|EFM21134.1| riboflavin biosynthesis protein RibD [Pantoea sp. aB]
Length = 366
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 141/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG++ GEG+H +AG+PHAEV ALR AGE
Sbjct: 2 DELYMARALELARRGRFTTMPNPNVGCVIVRDGEVAGEGWHQRAGEPHAEVHALRMAGEK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL +GI V
Sbjct: 62 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLHRLHQSGIAV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 122 SHGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQR 181
Query: 254 LQEYDAIILSASS---------TKKYS--IPASQ----EPDANQPFRIITVS-NHASP 295
L+ A ILS+S+ T ++S P SQ E QP R+I S N +P
Sbjct: 182 LRAQSAAILSSSATVLADDPSLTVRWSELDPESQSLLDEQQLRQPVRVIVDSQNRVTP 239
>gi|311280696|ref|YP_003942927.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1]
gi|308749891|gb|ADO49643.1| riboflavin biosynthesis protein RibD [Enterobacter cloacae SCF1]
Length = 368
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 181/340 (53%), Gaps = 35/340 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIV+DG IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEVYMARALKLAQRGRFTTHPNPRVGCVIVRDGDIVGEGFHLRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AG++V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGVEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPWLQLKLGASLDGGTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASPIR 297
L+ IL++S+T PA +E DA+ QP RI+ S N +P
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWEELDADTQASYPQENLRQPVRIVIDSRNRVTPEH 242
Query: 298 IPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSV 353
+ + TD + PD G+ T+N+ QL+L ++ SV
Sbjct: 243 --RIVHQPGETWFARTDEDSRQWPD----GVSTLNIPAHNGQLDLVLLMMQLGRRQINSV 296
Query: 354 LVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
V+ LL+ G+ + +++V V P GSD
Sbjct: 297 WVEAGPRLAG--ALLQAGV----VDELIVYVAPKLLGSDA 330
>gi|261341007|ref|ZP_05968865.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus
ATCC 35316]
gi|288316872|gb|EFC55810.1| riboflavin biosynthesis protein RibD [Enterobacter cancerogenus
ATCC 35316]
Length = 367
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAEALNKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S T PA
Sbjct: 183 LRAQSHAILTSSETVLADDPA 203
>gi|237809265|ref|YP_002893705.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187]
gi|237501526|gb|ACQ94119.1| riboflavin biosynthesis protein RibD [Tolumonas auensis DSM 9187]
Length = 370
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YM R ++LA + +TSPNP VGCVIV DG+IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 5 EDHLYMSRALQLAEQGRFTTSPNPNVGCVIVADGRIVGEGFHLRAGEPHAEVHALRMAGD 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V+ +G+ RL DAG+
Sbjct: 65 KARGATAYVTLEPCSHFGRTPPCADALVNAGVARVVAAMEDPNPQVSGRGMRRLADAGVT 124
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
+ G+ + LN FI R+ G P+ L+ S++G
Sbjct: 125 IQTGLLQAQAEALNPGFIKRMRHGLPYVRLKLAASLDG 162
>gi|114566748|ref|YP_753902.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114337683|gb|ABI68531.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 367
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 195/380 (51%), Gaps = 41/380 (10%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
+ DD +M+R +ELA +A G TSPNP+VG V+VKDG+I+GEG+H +AG PHAE+ AL A
Sbjct: 3 NNDDQRFMQRALELAARARGRTSPNPLVGAVLVKDGQILGEGYHQRAGTPHAEINALNTA 62
Query: 134 G-ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
G E A+GA+ YV+LEPC+HYGRT PC AL++A V +VV+ LDPNP V+ +G++ L++A
Sbjct: 63 GRERAKGASIYVNLEPCSHYGRTAPCALALVEAGVAEVVIATLDPNPQVSGRGVQILQEA 122
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG---- 248
GI VGV + LNE F I G+PF +L+ ++++G + G+ +G
Sbjct: 123 GIKTRVGVLTAEARELNEFFFKYIQGGRPFVSLKVAMTLDGKIASSNGDSRWITGTASRE 182
Query: 249 YYSQLLQEYDAIILSASSTKKYSIPASQEPDAN---------QPFRIITVSNHASPIRIP 299
Y QL YD I++ + K +P N P RII P+
Sbjct: 183 YVHQLRNIYDGIMVGIGTVLK------DDPRLNTRLELEGKRDPVRIIIDGRLDMPLDSN 236
Query: 300 GLSEESSSKVIVFTDGEITVEPDMGTK--GIETVNL----HQLNLKAVLDYCYSHGFCSV 353
+ +VFT E + G+E + L +LN++ LD S+
Sbjct: 237 IARTGHEQRTLVFTAENADQEKANSLRECGLEIIKLGGNPDRLNIEEALDILGKMEIMSL 296
Query: 354 LVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD------GGNPHTLLNSLGKRL 407
L++ G E + IE+ L+ K+ + P G GG ++N K
Sbjct: 297 LLE-----GGAE-INSYMIEKQLVDKLYWFIAPKIIGGRSSPSPLGGEGIKIMNQAIK-- 348
Query: 408 ILKNLQPKMSSQSIVLEGYL 427
LK++ + I++ GY+
Sbjct: 349 -LKSVTTRHFDDDILISGYI 367
>gi|259909281|ref|YP_002649637.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96]
gi|387872242|ref|YP_005803623.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia pyrifoliae DSM 12163]
gi|224964903|emb|CAX56426.1| Riboflavin biosynthesis protein RibD [Erwinia pyrifoliae Ep1/96]
gi|283479336|emb|CAY75252.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia pyrifoliae DSM 12163]
Length = 367
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 130/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCV+V+DG+IVGEG+H AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALELARRGRFTTTPNPNVGCVLVRDGQIVGEGYHMLAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+H+GRTPPC EALI A +K+VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 SLGATAYVTLEPCSHHGRTPPCCEALIAAGIKRVVTAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ + ILS S+T PA
Sbjct: 183 LRAQSSAILSTSATVLADNPA 203
>gi|440759481|ref|ZP_20938618.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea
agglomerans 299R]
gi|436426799|gb|ELP24499.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pantoea
agglomerans 299R]
Length = 366
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 141/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG++ GEG+H +AG+PHAEV ALR AGE
Sbjct: 2 DELYMARALELARRGRFTTMPNPNVGCVIVRDGEVAGEGWHQRAGEPHAEVHALRMAGEK 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL +GI V
Sbjct: 62 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLHRLHQSGIAV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + + Q
Sbjct: 122 SHGLMMPEAEALNRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQR 181
Query: 254 LQEYDAIILSASS---------TKKYS--IPASQ----EPDANQPFRIITVS-NHASP 295
L+ A ILS+S+ T ++S P SQ E QP R+I S N +P
Sbjct: 182 LRAQSAAILSSSATVLADDPSLTVRWSELDPESQSLLDEQQLRQPVRVIVDSQNRVTP 239
>gi|168181552|ref|ZP_02616216.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf]
gi|237796324|ref|YP_002863876.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4
str. 657]
gi|182674971|gb|EDT86932.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Bf]
gi|229264059|gb|ACQ55092.1| riboflavin biosynthesis protein RibD [Clostridium botulinum Ba4
str. 657]
Length = 365
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 195/372 (52%), Gaps = 28/372 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++VK+ KI+GEG+H G PHAEV+ALR+AG
Sbjct: 2 EDYNFYMEKTLKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E ++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V + ++ K+LNE FI I KPF L+ +++G + + GE E+
Sbjct: 122 EVVTEIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATRTGESKWITGEEARHKV 181
Query: 251 SQLLQEYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
Q+ + I++ + K + ++ P II SN P+ L S +
Sbjct: 182 QQIRNDLSGIMVGIDTVIKDDPLLTTRIEGGRSPKAIIVDSNLRIPLESKILETLSKRAI 241
Query: 310 IVFTD------GEITVEPDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ T + ++G K +E + + L +++Y + G S+L L G
Sbjct: 242 YIATTKKHKNPSKKNALENLGAKVLEFEENQEGKVPLNKLMEYLGTEGVDSIL--LEGGS 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKNLQPK 415
LKEGI + KI+ + P + G D GG T + SL L+NL+ +
Sbjct: 300 TLNFSALKEGI----VDKIMCFIAPKIMGGQDSKTMIGG---TGIESLKDIFNLQNLKFE 352
Query: 416 MSSQSIVLEGYL 427
Q I++EGY+
Sbjct: 353 KIGQDILIEGYV 364
>gi|427407049|ref|ZP_18897254.1| riboflavin biosynthesis protein RibD [Selenomonas sp. F0473]
gi|425707524|gb|EKU70568.1| riboflavin biosynthesis protein RibD [Selenomonas sp. F0473]
Length = 370
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 158/293 (53%), Gaps = 16/293 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR + LA A G TSPNP+VG VIV+DG IVG G+H AG+PHAE+ ALR AG+L
Sbjct: 8 DESYMREALRLAEYARGRTSPNPLVGAVIVRDGIIVGSGWHRAAGEPHAEIHALRMAGDL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC HYGRT PC EA+I A + +VV + DPNP V G+ERLR AGI V
Sbjct: 68 ARGATLYVTLEPCCHYGRTGPCAEAVIAAGIARVVTALGDPNPAVAGHGIERLRAAGIAV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ E +R NE F+ +VT +PF TL+ ++++G + G +G + E
Sbjct: 128 ATGICAEKARRQNEVFLKWVVTKRPFVTLKTAMTLDGKTASRTGASHWITGEAARTRVHE 187
Query: 257 ----YDAI------ILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
YD I +L+ + +P P R++ S +P L++ ++
Sbjct: 188 WRDAYDVILVGIGTVLADDPSLTVRLPHRT---GKNPVRVVLDSMARTPHDAKLLTDGAA 244
Query: 307 SKVIVF---TDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
++V D + T + T + ++ A+LD+ + SV V+
Sbjct: 245 RTIVVAGERADPKRTALLQACGAEVVTFGRERPDIAALLDFLGAQELTSVFVE 297
>gi|187778552|ref|ZP_02995025.1| hypothetical protein CLOSPO_02147 [Clostridium sporogenes ATCC
15579]
gi|187772177|gb|EDU35979.1| riboflavin biosynthesis protein RibD [Clostridium sporogenes ATCC
15579]
Length = 364
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 198/372 (53%), Gaps = 28/372 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA K G +PNP VG +++KD KI+GEG+H G PHAEV+ALR+AG
Sbjct: 2 EDYNFYMEKALKLAKKGEGKVNPNPKVGAIVIKDNKIIGEGYHKYFGGPHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC +A++KA + K V+ M DPN +V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAKAIVKAGIAKAVIAMKDPNSLVQGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V + ++ K LNE FI I +PF L+ +++G + + GE ES
Sbjct: 122 EVVTDIMEKESKELNEVFIKYITKKEPFVVLKTASTLDGKIATKKGESKWITGEESRYRV 181
Query: 251 SQLLQEYDAIILSASS-TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
Q+ + I++ + K + ++ + P II SN P+ L ++ +
Sbjct: 182 HQIRNDLSGIMVGIGTIIKDNPLLTTRIEEGRSPKAIIVDSNLRIPLESKILETINARSI 241
Query: 310 IVFTD---GEITVEPDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ T +++ + D+ G++ + + + LK ++ Y S+L L G
Sbjct: 242 YIATTKKHKDLSKKNDLENLGVKILEFEENEEGKVPLKKLMQYLGEEEIDSIL--LEGGS 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKNLQPK 415
LKEGI + K++ + P + G D GG T +++L L+NL +
Sbjct: 300 TLNFSALKEGI----VDKVMCFIAPKIIGGQDSKTMIGG---TGVDNLKDMFKLQNLNFE 352
Query: 416 MSSQSIVLEGYL 427
+ I++EGY+
Sbjct: 353 KIGEDILIEGYI 364
>gi|108757223|ref|YP_632926.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622]
gi|108461103|gb|ABF86288.1| riboflavin biosynthesis protein RibD [Myxococcus xanthus DK 1622]
Length = 387
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 196/373 (52%), Gaps = 39/373 (10%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
F+MR +E A K +G TSPNP+VG V+VK G+I+ G+H KAG HAEV AL AG A+
Sbjct: 30 FFMRIALEEAAKGLGRTSPNPVVGAVLVKGGRIIARGYHKKAGSAHAEVVALEAAGARAK 89
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GA Y +LEPC+HYGRTPPC+ A+I+A V++V+ DPNP V+ KG+ R+R AG+ V
Sbjct: 90 GADLYTTLEPCDHYGRTPPCSMAIIEAGVRRVICASADPNPKVSGKGVSRMRRAGLKVLT 149
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLL 254
GV E RLN F I TG P+ TL+ ++++G + G+ +G + +L
Sbjct: 150 GVLAEDADRLNRPFFKMIRTGLPWVTLKAAVTLDGKLATATGDSRWVTGAPARAWVHRLR 209
Query: 255 QEYDAIILSASSTKK------YSIPASQEPDANQPFRIITVSNHASPIRI-PG---LSEE 304
D I++ A++ +K +P D P R++ V +H +R+ PG ++
Sbjct: 210 DSVDVILVGANTVRKDDPKLTTRLPGGGGKD---PLRVV-VDSH---LRLSPGYTIFTQR 262
Query: 305 SSSKVIVFT--DGEITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLV--- 355
S+++ +V T D E +G++ L Q++LKA+L G V+V
Sbjct: 263 SAARTVVATLEDPEGRKARRFLAQGVDVWQLREKAGQVDLKALLRRLAKGGHNHVMVEGG 322
Query: 356 -DLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQP 414
++ G++ L L + + L K++ W G G + + + L +K+L
Sbjct: 323 AEMYGSF--LRGRLADSLALFLAPKLIGSPGLSWAGDLG------VKEMAQALAVKDLAF 374
Query: 415 KMSSQSIVLEGYL 427
+ I+L+ L
Sbjct: 375 ERHGDDILLQALL 387
>gi|229092353|ref|ZP_04223525.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
gi|228691055|gb|EEL44822.1| Riboflavin biosynthesis protein [Bacillus cereus Rock3-42]
Length = 350
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 173/305 (56%), Gaps = 19/305 (6%)
Query: 93 GSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGATAYVSLEPCNHY 152
G T+PNP+VG VIV D +IVG G H KAG+PHAE+ A+R AGE A G T YV+LEPC+H+
Sbjct: 3 GQTTPNPLVGSVIVNDNRIVGIGAHMKAGEPHAEIHAIRMAGEQARGGTIYVTLEPCSHH 62
Query: 153 GRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAF 212
GRT PC EA+++A +KKVVV LDPNP+V+ +G++ L+DAGI+V VGV +E K++NE F
Sbjct: 63 GRTGPCAEAIVQAGIKKVVVATLDPNPLVSGRGIKILQDAGIEVLVGVCEEESKKMNEVF 122
Query: 213 IHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLLQEYDAIILSASSTK 268
I+T +PF T++ ++++G + L + E+ Q+ E AI++ A++ +
Sbjct: 123 NKYIMTKRPFVTIKSGVTLDGKIATFLSDSKWITSTEARQEVHQIRNENAAILVGANTVQ 182
Query: 269 KYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTDGEITVEP----- 321
K + P+ ++ P+ P R+I S P+ +++E + I FT E
Sbjct: 183 KDN-PSLTTRIPNGRNPIRVILDSTLRIPMEANVVTDEEAPTWI-FTTSNHAAEKRKALE 240
Query: 322 DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIV 381
G K +NL +LD G S+L++ G IE L+ K++
Sbjct: 241 SAGVKVFVISGEKHINLYEMLDVLGQKGVSSLLIEGGGEVN------ASFIENELMDKLI 294
Query: 382 VEVLP 386
+ P
Sbjct: 295 LYFAP 299
>gi|419862437|ref|ZP_14385042.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O103:H25 str. CVM9340]
gi|388345194|gb|EIL10980.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli O103:H25 str. CVM9340]
Length = 367
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+ ATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 AKDATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ ++LN+ F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 257 YDA---IILSASSTKKYSIPA 274
A IL++S+T PA
Sbjct: 183 QRAQSHAILTSSATVLADDPA 203
>gi|26522745|dbj|BAC44849.1| pyrimidine deaminase/pyrimidine reductase [Photobacterium
phosphoreum]
Length = 388
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 176/343 (51%), Gaps = 41/343 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA +T+PNP VGCVIV DG IVGEG+H +AGQPHAEVFALR A +
Sbjct: 5 DQQMMSRAIALAKHGCYTTAPNPNVGCVIVNDGDIVGEGYHYQAGQPHAEVFALRQAQQR 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+HYGRTPPC EALI AKV +VV M+DPNP V +G+ LR AGI+V
Sbjct: 65 AQGATVYVTLEPCSHYGRTPPCAEALINAKVARVVCAMVDPNPAVAGRGIALLRAAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE--SGGYYSQLL 254
VGV + LN FI ++ P+ L+ S++G L GV++ +G +
Sbjct: 125 DVGVLASQAQALNPGFIKQMSHQMPYVELKLAASLDGRT--ALANGVSKWITGPKARADV 182
Query: 255 QEYDA---IILSASSTKKYSIP---------------ASQEPDANQPFRIITVS-NHASP 295
Q + A ILS S+T P A + QP R+I S N +P
Sbjct: 183 QHFRAQAGAILSTSATVIADDPSLNVRWSELEESVQQAYPQSALRQPIRVIIDSQNRLTP 242
Query: 296 ----IRIPGLSEESSSKVIVFTDGEITVEPD-MGTKGIET-VNLHQLNLKAVLDYCYSHG 349
+PG ++ T+ PD + I T + HQL+L ++ ++G
Sbjct: 243 EYQLFHLPG------ETILARTEIGTEAWPDSVQQWQIPTQTDSHQLDLVVLMSRLANYG 296
Query: 350 FCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSD 392
+ V+ L ++Q L+ +++ P GSD
Sbjct: 297 INHIWVEAGAR------LAGALLQQQLVDSLILYQAPKLMGSD 333
>gi|378697150|ref|YP_005179108.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Haemophilus influenzae 10810]
gi|301169668|emb|CBW29269.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Haemophilus influenzae 10810]
Length = 372
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/234 (44%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC HYGRTPPC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCAHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA-----SQEPD----------ANQPFRIITVSNH 292
A +LS S+T P+ + P+ QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTGYKKEWLRQPVRVILDSQH 241
>gi|46199007|ref|YP_004674.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Thermus thermophilus HB27]
gi|46196631|gb|AAS81047.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Thermus thermophilus HB27]
Length = 377
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 143/232 (61%), Gaps = 11/232 (4%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
D D+ F +RR ++LA +A G TSPNP+VG V+V++G+IVGEGFHP+AG+PHAEVFALR+
Sbjct: 2 RDLDERF-LRRALQLAERARGHTSPNPLVGAVLVREGRIVGEGFHPRAGEPHAEVFALRE 60
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AGELA GATAYV+LEPC+H+GRTPPC+ AL++A V +VVV + NP+ GLERLR
Sbjct: 61 AGELARGATAYVTLEPCDHFGRTPPCSLALLQAGVSRVVVAAREENPVAKG-GLERLRVG 119
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY 249
G+ V G+ + + NE F G PF L+ L+++G V G+ +E+
Sbjct: 120 GVQVEAGLLEAEARAQNEVFFAVQKKGLPFVLLKAALTLDGKVAAPSGDARWISSEASRR 179
Query: 250 YSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP 299
+ +++ ++ T PA +EPD FR + P+R P
Sbjct: 180 VAHAYRQWLPAVMVGVGTVLKDDPALTVREPD----FRPFPLMVEPPPLRDP 227
>gi|289671055|ref|ZP_06492130.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 369
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI A V +VV M DP P VN G LRDAGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGFALLRDAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + LN F+ R+ G P+ ++ S++G G+ +G +Q
Sbjct: 131 VLSGVMHAQARTLNRGFLSRVERGWPWVRIKLGASLDGRTALASGQSKWITGADARADVQ 190
Query: 256 EYDA---IILSASST 267
+ A IL+ + T
Sbjct: 191 RWRARACAILTGAGT 205
>gi|403746120|ref|ZP_10954777.1| riboflavin biosynthesis protein RibD [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121004|gb|EJY55342.1| riboflavin biosynthesis protein RibD [Alicyclobacillus hesperidum
URH17-3-68]
Length = 383
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 166/308 (53%), Gaps = 39/308 (12%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MR + +A+ TSPNP VG V+V+DG+IVG+G H K G PHAE++ALR AGE
Sbjct: 17 DEHFMRYALAVASLGGAQTSPNPRVGAVVVRDGEIVGQGAHLKPGDPHAEIYALRMAGEK 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPCNH+GRTPPC+EA++ + +K+VVV +LD +P G+ RLRD GIDV
Sbjct: 77 AQGATIYVTLEPCNHHGRTPPCSEAILASGIKRVVVAVLDTDPRTAGGGVARLRDHGIDV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
TVGV ++ + LN AF HR+ +G+P + L+++GHV G +G +
Sbjct: 137 TVGVLEDEARALNRAFFHRLQSGRPLVVYKAALTLSGHVAANTGHSQYVTGPLARADVQR 196
Query: 253 LLQEYDAIILSASST----KKYSIPASQEPDAN--QPFRIITVSNHASPIRIPG---LSE 303
L E+ I + + + ++ S A QP R+I S +R+P +
Sbjct: 197 LRMEHPGIAVGIGTVLADDPRLTVRNSDTEQAGDWQPLRVIFDSG----LRLPASARMLA 252
Query: 304 ESSSKVIVFT---------------DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSH 348
E VIV T G++ P G KG + +L A L +
Sbjct: 253 EPGQTVIVTTPSALADERRVQEIEAAGQVVWLPVAGDKG-------RTSLTAALPKLAAL 305
Query: 349 GFCSVLVD 356
G S+L++
Sbjct: 306 GLNSILLE 313
>gi|289663675|ref|ZP_06485256.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 369
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 120/195 (61%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI A V +VV M DP P VN G LRDAGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIDAGVTRVVAAMADPFPQVNGGGFALLRDAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + LN F+ R+ G P+ ++ S++G G+ +G +Q
Sbjct: 131 VLSGVMHAQARTLNRGFLSRVERGWPWVRIKLGASLDGRTALASGQSKWITGADARADVQ 190
Query: 256 EYDA---IILSASST 267
+ A IL+ + T
Sbjct: 191 RWRARACAILTGAGT 205
>gi|15893879|ref|NP_347228.1| riboflavin biosynthesis protein RIBD (pirimidine deaminase and
pirimidine reductase) [Clostridium acetobutylicum ATCC
824]
gi|337735807|ref|YP_004635254.1| riboflavin biosynthesis pirimidine deaminase/pirimidine reductase
RibD [Clostridium acetobutylicum DSM 1731]
gi|15023459|gb|AAK78568.1|AE007574_6 Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
pirimidine reductase) [Clostridium acetobutylicum ATCC
824]
gi|336292253|gb|AEI33387.1| riboflavin biosynthesis protein RIBD (pirimidine deaminase and
pirimidine reductase) [Clostridium acetobutylicum DSM
1731]
Length = 383
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 192/367 (52%), Gaps = 28/367 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
+M+R +E+A K G +PNPMVG VIVKD KIVGEG+H K G HAEV AL AG+ AEG
Sbjct: 23 FMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHEKFGGNHAEVNALNMAGKDAEG 82
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+ YV+LEPC+HYG+TPPC A++KA +K+V++ M DPNP+V++KG++ L++ GI+V G
Sbjct: 83 SELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIKILKENGIEVITG 142
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
V + ++LNE FI I T +PF T++ +++G + GE SG Y L
Sbjct: 143 VMKKESEKLNEVFIKYITTKRPFITMKMASTLDGKICTVSGESRWISGQTSRKYVHHLRS 202
Query: 256 EYDAIIL---SASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVF 312
+Y +I++ +A + + + P II S P + + K+I+
Sbjct: 203 KYMSIMVGVGTAINDNPLLTTRIEGENVRSPIAIIVDSKLRVPKDLRIFNTLQERKIIIA 262
Query: 313 TD--GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
T + E ++ G+ + N + LDY L+D G G +LL+
Sbjct: 263 TTEYADKNKENELINMGVSIIKTPNKNGRVNLDY---------LLDELGKIGIDSVLLEG 313
Query: 371 GIEQNL-------LQKIVVEVLPVWNGSD---GGNPHTLLNSLGKRLILKNLQPKMSSQS 420
G E N + KI+ + P+ G + G + L + + ++ + +
Sbjct: 314 GSELNFSFIKEENIDKIMCFIAPMIVGGEKAKGAVGGKGIEKLKDSIKIYDMDSEKIGED 373
Query: 421 IVLEGYL 427
I++ GYL
Sbjct: 374 ILVSGYL 380
>gi|422023850|ref|ZP_16370352.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia sneebia DSM 19967]
gi|414091865|gb|EKT53546.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia sneebia DSM 19967]
Length = 375
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/234 (44%), Positives = 135/234 (57%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA +TSPNP VGCVIV+D +IVGEG+H KAG+PHAEV AL AG+
Sbjct: 5 DSIYMARALELAQIGRFTTSPNPNVGCVIVRDDEIVGEGYHQKAGEPHAEVHALHMAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALIKA V +VV M DPNP V+ +GL L AGI+
Sbjct: 65 AQGATAYVTLEPCSHHGRTPPCAEALIKAGVSRVVAAMQDPNPQVSGRGLYMLSKAGIET 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV E + +N F+ R+ T P+ L+ S++G GE + + Q+
Sbjct: 125 QSGVLMEQAEFINRGFLKRMRTAFPYVQLKLAASLDGKTALASGESKWITSAAARRDVQV 184
Query: 254 LQEYDAIILSASSTKKYSIPASQ---------------EPDANQPFRIITVSNH 292
L+ + ILS SST P+ E QP RII +H
Sbjct: 185 LRAEASAILSTSSTVLADDPSLTVRWNELPLEIQAIYPEETVRQPIRIILDEHH 238
>gi|159903849|ref|YP_001551193.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Prochlorococcus marinus str. MIT 9211]
gi|159889025|gb|ABX09239.1| putative Diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Prochlorococcus marinus str. MIT 9211]
Length = 365
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 193/364 (53%), Gaps = 27/364 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGELA 137
++M+R +LA A G T+PNP+VG V++ D ++GEGFH KAG PHAEV ALR AG+ A
Sbjct: 13 YWMQRAFQLAQLADGETNPNPLVGAVVLDPDKLLIGEGFHSKAGSPHAEVEALRQAGDAA 72
Query: 138 EGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVT 197
+G T V+LEPC HYG TPPCT+ +I++ V +VVVG+ DP+P V+ G+ L++AGI+V
Sbjct: 73 KGGTLLVTLEPCCHYGLTPPCTKTIIESGVSRVVVGLQDPDPRVSGNGIRLLKEAGIEVI 132
Query: 198 VGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEY 257
G+ E N AFI RI TG+P+ L+ +S +G G +S SQ +E
Sbjct: 133 TGILKEEISFQNRAFIFRIKTGRPWGILKLAMSFDGRT----GLSNGKSKWITSQEAREK 188
Query: 258 --------DAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
DA+I+ + + + S+ +P R++ + + PI ES+
Sbjct: 189 VHALRAKCDAVIIGGGTLRADDPLLTSRGLRNPEPLRVVFSQSLSLPIGAQIWRTESAKT 248
Query: 309 VIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
++ F++ + +E + LH+ N + +L+ G +L + + L
Sbjct: 249 LVAFSNENALPLIQELPENVEKLKLHESNPRELLEELAKKGCNRILWECGPS------LA 302
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLL-----NSLGKRLILKNLQPKMSSQSIVL 423
I+QN +Q+IV+ + P G G TLL +SL + LILK + S + VL
Sbjct: 303 TSAIKQNCVQEIVIFMAPKLLG--GLPAMTLLGNFGFDSLDQALILKEVSLAKSGKDFVL 360
Query: 424 EGYL 427
+L
Sbjct: 361 NTFL 364
>gi|261365730|ref|ZP_05978613.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996]
gi|288565756|gb|EFC87316.1| riboflavin biosynthesis protein RibD [Neisseria mucosa ATCC 25996]
Length = 365
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 167/327 (51%), Gaps = 22/327 (6%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M+ + LA STSPNP VGCVI G+IVG+GFH KAG+PHAEV ALR A
Sbjct: 3 DCIDTQMMQNALALARLGRFSTSPNPRVGCVIAHGGQIVGQGFHVKAGEPHAEVHALRQA 62
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE+A GATAYV+LEPC+HYGRTPPC EALI + V +VV M DPNP+V KGL L AG
Sbjct: 63 GEMARGATAYVTLEPCSHYGRTPPCAEALISSGVSRVVAAMTDPNPLVAGKGLAMLEAAG 122
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-----VAESGG 248
I G+ + + LN F+ RI G+PF ++ S++G L +G E+
Sbjct: 123 IRTESGLLEAEARELNRGFLSRIERGRPFVRIKCAASLDGKT--ALADGRSYWITGEAAR 180
Query: 249 YYSQLLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
Q L+ +L+ T P P QP RI+ S +P+ +S++
Sbjct: 181 ADVQTLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQPARIVLDSKLQTPLGSHMVSDDL 240
Query: 306 SSKVIV-FTDGEITVEPDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLVDLRG 359
S VIV D E ++P I + + ++L A+L G+ ++V+
Sbjct: 241 SPTVIVTAVDDEERLKPYRAFHHIRILRSSENAAGRIDLAALLPQLAELGYGEIMVEAGA 300
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP 386
L IE L +IV+ P
Sbjct: 301 T------LTSAFIEAGLADEIVLYQAP 321
>gi|109897636|ref|YP_660891.1| riboflavin biosynthesis protein RibD [Pseudoalteromonas atlantica
T6c]
gi|109699917|gb|ABG39837.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas atlantica T6c]
Length = 372
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 162/301 (53%), Gaps = 25/301 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D M + LA K +TSPNP VGCVI G IVG+G+H KAG PHAE+ A+ AGE
Sbjct: 8 DAKMMALAIRLAEKGQYTTSPNPNVGCVITDAQGNIVGQGWHQKAGTPHAEIHAIAQAGE 67
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
+GATAYV+LEPCNH+GRT PC+EAL+ A VK+VV M+DPNP+V GL++L DAG+
Sbjct: 68 RTKGATAYVTLEPCNHHGRTGPCSEALLDAGVKRVVAAMVDPNPLVAGSGLQKLSDAGVQ 127
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V+ G+ + K LN FI R+ TGKP+ T++ S++G GE +G + +Q
Sbjct: 128 VSSGLLESEAKALNRGFIKRMQTGKPWVTVKLASSLDGKTALNNGESQWITGPLAREDVQ 187
Query: 256 EYDA---IILSASSTKKYSIP--------------ASQEPDANQPFRIITVS-NHASP-I 296
+ A ILS S T P A E + QP R++ N P +
Sbjct: 188 RHRAQSCAILSGSGTVLADNPSLNVRYSELGFARNALAEVNLRQPVRVLLDGRNQMRPDL 247
Query: 297 RIPGLSEESSSKVIVFTDGEITVE-PDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLV 355
+ L SS +++ T E PD + N QL+L+ V+ + GF + V
Sbjct: 248 HLFAL----SSPIVIINSQPNTAEFPDHVEQYQAQSNGAQLDLQDVMKHLGQRGFNHIWV 303
Query: 356 D 356
+
Sbjct: 304 E 304
>gi|373466611|ref|ZP_09557925.1| riboflavin biosynthesis protein RibD [Haemophilus sp. oral taxon
851 str. F0397]
gi|371760393|gb|EHO49082.1| riboflavin biosynthesis protein RibD [Haemophilus sp. oral taxon
851 str. F0397]
Length = 372
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LATK +T PNP VGCV+VK+ +IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DHKFMQRALDLATKGQYTTMPNPSVGCVLVKNDEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A V KV+ M DPNP V KGL+ L +AGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSEAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGPDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVLSDDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|423112827|ref|ZP_17100518.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5245]
gi|376390321|gb|EHT03007.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5245]
Length = 367
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 141/238 (59%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIV+DG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALKLAARGRFTTHPNPNVGCVIVEDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ G+DV
Sbjct: 63 AQGATAYVTLEPCSHHGRTPPCCEALIAAGVTRVVAAMQDPNPQVAGRGLYRLQQEGVDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA + P N QP RI+ S N +P
Sbjct: 183 LRAQSHAILTSSATVLADDPALTVRWDELNAETQALYPQENLRQPLRIVIDSHNRVTP 240
>gi|295112158|emb|CBL28908.1| riboflavin biosynthesis protein RibD [Synergistetes bacterium SGP1]
Length = 371
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/235 (40%), Positives = 144/235 (61%), Gaps = 8/235 (3%)
Query: 69 QVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVF 128
++ N + D +YMRR + LA + +G TSPNPMVGCV+V+DG+I+GEG+H + G+ HAEV
Sbjct: 3 EIVVNRRVDEYYMRRALSLALRGMGRTSPNPMVGCVLVRDGRILGEGWHRRCGEDHAEVA 62
Query: 129 ALRDA---GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKG 185
AL+DA GE A GA YV+LEPC H+GRTPPC + L++ V +VV G DPNP VNS G
Sbjct: 63 ALKDAERRGETARGAEVYVTLEPCCHFGRTPPCAQRLVREGVSRVVAGTADPNPRVNSGG 122
Query: 186 LERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAE 245
L LR+AG++V+ +E +R+N+ FI G+P+ TL+ ++G + G+
Sbjct: 123 LAVLREAGVEVSAPCLEEEARRVNKGFIRVQTLGRPWVTLKAASGLDGRMALTDGDSRWI 182
Query: 246 SGGYYSQ----LLQEYDAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASP 295
+G Q + +DAI++ S+ K + + + P R+I S+ +P
Sbjct: 183 TGPEARQWAHGMRASHDAILVGVSTVLKDDPELTVRHTEGKSPLRVILDSHLRTP 237
>gi|346723675|ref|YP_004850344.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346648422|gb|AEO41046.1| riboflavin biosynthesis protein RibD [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 369
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 111/166 (66%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + LA + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 11 DDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 70
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
LA GATAYV+LEPC HYGRTPPC ALI A V +VV M DP P VN G LR+AGI+
Sbjct: 71 LARGATAYVTLEPCAHYGRTPPCALALIDAGVARVVAAMADPFPQVNGGGFALLREAGIE 130
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
V GV + LN+ F+ R+ G+P+ ++ S++G GE
Sbjct: 131 VLSGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGE 176
>gi|417841484|ref|ZP_12487588.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M19501]
gi|341949522|gb|EGT76126.1| Riboflavin biosynthesis protein RibD [Haemophilus haemolyticus
M19501]
Length = 372
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 139/234 (59%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+ ++LA K +T+PNP VGCV+VK G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DHKFMQLALDLAAKGQYTTTPNPSVGCVLVKHGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC LI+A + KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCSHYGRTPPCALGLIEAGIVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V + ++ +++N+ F+ R+ G PF L+ +S++G GE +G +Q+
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITGSDARSDVQK 187
Query: 257 YDA---IILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
A +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSATVLADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|383816728|ref|ZP_09972120.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Serratia sp. M24T3]
gi|383294440|gb|EIC82782.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Serratia sp. M24T3]
Length = 380
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 120/181 (66%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM R ELA K +T+PNP VGCVIV+DG+IVGEG+H KAG PHAEV ALR AGE
Sbjct: 4 DDYYMARAFELARKGRFTTTPNPNVGCVIVRDGEIVGEGYHIKAGGPHAEVHALRMAGEQ 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A + +VV M DPNP V +GL RLR AG++V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALLNAGIIRVVAAMQDPNPEVAGRGLYRLRQAGVEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 SNGLMLSQAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSAAARQDVQR 183
Query: 257 Y 257
+
Sbjct: 184 F 184
>gi|152979034|ref|YP_001344663.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes
130Z]
gi|150840757|gb|ABR74728.1| riboflavin biosynthesis protein RibD [Actinobacillus succinogenes
130Z]
Length = 375
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 139/236 (58%), Gaps = 18/236 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM+ ++LA + +T+PNP VGCV+VK KIVG GFH +AG+PHAEV A+RDAG
Sbjct: 6 EQDQAYMQLALDLARRGRFTTTPNPNVGCVLVKHNKIVGTGFHFRAGEPHAEVMAIRDAG 65
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ +GATAYV+LEPC+HYGRTPPC + LI A V KV++ DPNP V +GL+ L+DAGI
Sbjct: 66 DNTQGATAYVTLEPCSHYGRTPPCAQGLINAGVTKVIIATQDPNPQVAGRGLKMLQDAGI 125
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+ VG+ E + +N F+ R+ TG PF L+ +S++G GE +G +
Sbjct: 126 ESAVGLLAEKAEAVNLGFLKRMRTGMPFVQLKLAMSLDGRTAMASGESKWITGEAARADV 185
Query: 255 QEYDA---IILSASST-----KKYSIPASQEP----------DANQPFRIITVSNH 292
QE A ILS + T + ++ Q P D QP R+I H
Sbjct: 186 QEGRAQASAILSTAETVLADDPQLNVRWEQLPQAVQIEYSLTDLRQPIRVILDRRH 241
>gi|381401829|ref|ZP_09926721.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Kingella
kingae PYKK081]
gi|380833228|gb|EIC13104.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Kingella
kingae PYKK081]
Length = 360
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 143/259 (55%), Gaps = 21/259 (8%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
+ D +M+R +ELA + STSPNP VGCVI +I+G+GFH +AG PHAEV A+R A
Sbjct: 5 NPQDTQHMQRALELAWQGRFSTSPNPRVGCVIAHGSQIIGQGFHVQAGSPHAEVHAIRQA 64
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GELA GATAYV+LEPC+HYGRTPPC E LI A V +VV M DPNP+V KGL L+ AG
Sbjct: 65 GELARGATAYVTLEPCSHYGRTPPCAEGLIAAGVSRVVAAMTDPNPLVAGKGLAMLQAAG 124
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS-- 251
I V G+ + ++LN F+ RI +PF +L+ S++G G+ +G
Sbjct: 125 IVVEQGLLEHEARQLNRGFLSRIERNRPFVSLKIAASLDGKTALSNGQSQWITGAAARAD 184
Query: 252 -QLLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
Q+ + +L+ T P P QP R++ S +P ESS
Sbjct: 185 VQIQRAQSCAVLTGIGTVLADNPRLNVRDFPTVRQPLRVVLDSQLRTP--------ESSH 236
Query: 308 KVIVFTDGE----ITVEPD 322
+ DG+ IT PD
Sbjct: 237 ---IIQDGQRTLIITTSPD 252
>gi|423101575|ref|ZP_17089277.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5242]
gi|376391363|gb|EHT04042.1| riboflavin biosynthesis protein RibD [Klebsiella oxytoca 10-5242]
Length = 367
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALKLAARGRFTTHPNPNVGCVIVKDGQIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ G+DV
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGVDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 GHGLMMNEAEALNKGFLKRMRTGFPWIQLKMGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S+T PA
Sbjct: 183 LRAQSHAILTSSATVLADDPA 203
>gi|387885831|ref|YP_006316130.1| pyrimidine reductase/pyrimidine deaminase [Francisella noatunensis
subsp. orientalis str. Toba 04]
gi|386870647|gb|AFJ42654.1| pyrimidine reductase/pyrimidine deaminase [Francisella noatunensis
subsp. orientalis str. Toba 04]
Length = 356
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 117/159 (73%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
+ +YM++ + LA + S SPNPMVGC+IVK+G I+ EG+H G+ HAE+ AL+ AG+
Sbjct: 5 ENYYMKQALTLANRGRLSVSPNPMVGCIIVKNGAIISEGWHEAVGEAHAEIHALKKAGDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPCT+ALIKA ++KVVV LDPNP+ KG+++L+DAGI+V
Sbjct: 65 AKGATAYVTLEPCCHHGRTPPCTDALIKADIQKVVVATLDPNPLFAGKGIQKLKDAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV 235
+GV ++ N+ F H T +PF ++ +S++G +
Sbjct: 125 KIGVLEKQALEQNKIFFHYQKTQRPFVYAKWAMSLDGKI 163
>gi|319645199|ref|ZP_07999432.1| RibD protein [Bacillus sp. BT1B_CT2]
gi|423682809|ref|ZP_17657648.1| riboflavin-specific deaminase [Bacillus licheniformis WX-02]
gi|317393008|gb|EFV73802.1| RibD protein [Bacillus sp. BT1B_CT2]
gi|383439583|gb|EID47358.1| riboflavin-specific deaminase [Bacillus licheniformis WX-02]
Length = 362
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 171/310 (55%), Gaps = 11/310 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA + G T NP+VG V+VKDG++VG G H K G+ HAEV A++ AG
Sbjct: 3 DAHYMNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGEAHAEVHAIQMAGRH 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGA YV+LEPC+HYG+TPPC E +I++ +K+VVV DPNP+V+ +G+E LR AGI+V
Sbjct: 63 AEGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIEMLRSAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV E + LNE F+H + TG P+ TL+ S++G G+ +E +
Sbjct: 123 ETGVLKEQAEELNEKFMHFMRTGLPYVTLKAAASLDGKTATATGDSKWITSEEARMDAHQ 182
Query: 254 LQEYDAIILSASSTKKYSIPA--SQEPDA-NQPFRIITVSNHASPIRIPGLSEESSSKVI 310
++ IL S T K P+ + P A NQP R++ + + P++ + ++ + I
Sbjct: 183 YRKNHQCILVGSGTIKADDPSLTCRLPGAVNQPVRVVLDTTLSIPLQSKVIQDKEAPTWI 242
Query: 311 VFT---DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T D E + + ++ +L ++ VL + G SV V+ G
Sbjct: 243 YTTSKADPEKVRNVEKEGVQVTVLDADELQVRDVLLHLADRGIASVFVE--GGATVHASF 300
Query: 368 LKEGIEQNLL 377
+KEG+ Q ++
Sbjct: 301 VKEGLYQQII 310
>gi|52080843|ref|YP_079634.1| riboflavin-specific deaminase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404489726|ref|YP_006713832.1| riboflavin biosynthesis protein RibD [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52004054|gb|AAU23996.1| riboflavin-specific deaminase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348716|gb|AAU41350.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase RibD [Bacillus licheniformis DSM 13 = ATCC
14580]
Length = 362
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 171/310 (55%), Gaps = 11/310 (3%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA + G T NP+VG V+VKDG++VG G H K G+ HAEV A++ AG
Sbjct: 3 DAHYMNLALELARQGEGQTGANPLVGAVVVKDGEVVGMGAHLKYGEAHAEVHAIQMAGRH 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGA YV+LEPC+HYG+TPPC E +I++ +K+VVV DPNP+V+ +G+E LR AGI+V
Sbjct: 63 AEGAVIYVTLEPCSHYGKTPPCAELIIRSGLKRVVVAAEDPNPLVSGRGIEMLRSAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
GV E + LNE F+H + TG P+ TL+ S++G G+ +E +
Sbjct: 123 ETGVLKEQAEELNEKFMHFMRTGLPYVTLKAAASLDGKTATATGDSKWITSEEARMDAHQ 182
Query: 254 LQEYDAIILSASSTKKYSIPA--SQEPDA-NQPFRIITVSNHASPIRIPGLSEESSSKVI 310
++ IL S T K P+ + P A NQP R++ + + P++ + ++ + I
Sbjct: 183 YRKNHQCILVGSGTIKADDPSLTCRLPGAVNQPVRVVLDTTLSIPLQSKVIQDKEAPTWI 242
Query: 311 VFT---DGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEML 367
T D E + + ++ +L ++ VL + G SV V+ G
Sbjct: 243 YTTSKADPEKVRNVEKEGVQVTVLDADELQVRDVLLHLADRGIASVFVE--GGATVHASF 300
Query: 368 LKEGIEQNLL 377
+KEG+ Q ++
Sbjct: 301 VKEGLYQQII 310
>gi|296101536|ref|YP_003611682.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295055995|gb|ADF60733.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 367
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + +N+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAEAINKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQH 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S T PA
Sbjct: 183 LRAQSHAILTSSETVLADDPA 203
>gi|419923214|ref|ZP_14441176.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-15]
gi|388394266|gb|EIL55569.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-15]
Length = 361
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
++LN+ F+ R+ TG P+ L+ S++G GE + QLL+
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQ 180
Query: 258 DAIILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|269792620|ref|YP_003317524.1| riboflavin biosynthesis protein RibD [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100255|gb|ACZ19242.1| riboflavin biosynthesis protein RibD [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 377
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 169/298 (56%), Gaps = 16/298 (5%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
+ ++ G++MR + LA + + SPNP VGCVIVKDG++VG G+H + G PHAEV AL
Sbjct: 12 RGEERAHGYFMRMALSLAIRGGTAVSPNPKVGCVIVKDGQVVGWGYHKRYGGPHAEVEAL 71
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
AG+ A+GATAYV+LEPC+H+G+TPPC L++A +++VV GM+DPNP VN +GLE L
Sbjct: 72 TMAGDRAQGATAYVTLEPCSHHGKTPPCAPRLVEAGIRRVVYGMMDPNPKVNGRGLEILA 131
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
G++V V ++ C+ N FI R+ G+P+ TL+ LSV+G + G+ +G
Sbjct: 132 SGGVEVVGPVMEDRCRWENRGFIRRMTLGRPWVTLKGALSVDGTTCLENGKSKWITGPLA 191
Query: 251 SQ----LLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEE 304
Q L E+DAI++ ++ PA + D + P ++I P+ L +
Sbjct: 192 RQKAHLLRAEHDAILVGINTVINDD-PALNVRSVDGDSPKKVILDGGLRVPLDAKALKD- 249
Query: 305 SSSKVIVFTDGE-----ITVEPDMGTKGIETVNLHQ-LNLKAVLDYCYSHGFCSVLVD 356
+ IVFT + + DMG + + L+L +VL G S+LV+
Sbjct: 250 --GERIVFTSTDAPKDRVEALRDMGVQVCPVPSQGGLLDLASVLSALGGMGVNSLLVE 305
>gi|386715967|ref|YP_006182291.1| riboflavin biosynthesis protein RibD [Halobacillus halophilus DSM
2266]
gi|384075524|emb|CCG47019.1| riboflavin biosynthesis protein RibD [Halobacillus halophilus DSM
2266]
Length = 371
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 24/304 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ +++A + VG TSPNP VG +++KD ++VG G H KAG+ HAEV AL+ AGE
Sbjct: 4 DEQYMKTAIQMAGETVGQTSPNPSVGAIVIKDNELVGLGVHVKAGEAHAEVHALQMAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GA YV+LEPC+HYG+TPPC +A+I A +K+VV+ DPNP V+ KG+ +R+AGI+V
Sbjct: 64 AKGAEIYVTLEPCSHYGKTPPCAKAIIDAGIKRVVIASHDPNPEVSGKGINMMREAGIEV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-------VAESGGY 249
V E RLN+ F H I TG+P+ L+ +S++G + GE E G
Sbjct: 124 ETNVLTEEADRLNKDFFHFIQTGEPYVRLKAAMSLDGKIATSTGESQWITGKEAREDGHT 183
Query: 250 YSQLLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIP---GLSEE 304
Y + DAI++ + + ++ E N P R++ SN +RIP L +
Sbjct: 184 YRHI---SDAILVGIQTVLSDDPTLTTRIEGKGNNPIRVVFDSN----LRIPLSSKLIQN 236
Query: 305 SSSKVIVFTDGEITVEPDMGTKGIETV-----NLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
+ +FT + + ++ + ++ Q+++ L Y S+LV+ G
Sbjct: 237 QEAPTWIFTGKHASKNMVQKLQDVDHIRVIQQDVDQIDIHQALQYLGEQKVTSLLVEGGG 296
Query: 360 NYGD 363
D
Sbjct: 297 TIAD 300
>gi|289765470|ref|ZP_06524848.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Fusobacterium sp. D11]
gi|289717025|gb|EFD81037.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Fusobacterium sp. D11]
Length = 370
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 175/312 (56%), Gaps = 19/312 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + GS +PNP+VG V+VKDGKI+GEG+H K G PHAEV+AL +AGE
Sbjct: 6 DEKYMARAIELAKRGTGSVNPNPLVGAVVVKDGKIIGEGWHKKYGGPHAEVWALNEAGEN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+H G+TPPC + +I+A +KK VV +DPNP+V KG++ + DAGI+V
Sbjct: 66 AKGATIYVTLEPCSHQGKTPPCAKRIIEAGIKKCVVACIDPNPLVAGKGIKIIEDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
+G+ ++ K +N+ F+ I P+ L+ ++++G + + G+ + + +Q
Sbjct: 126 KLGILEKEAKDVNKIFLKYIENKIPYLFLKCGITLDGKIATRSGKSKWITNEIAREKVQF 185
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQ-------PFRIITVSNHASPIRIPGLSEES 305
++ AI++ ++ K + D + PFR++ N SPI L+
Sbjct: 186 LRTKFMAIMVGINTVLKDNPSLDSRLDEKKFGIEKRNPFRVVIDPNLESPIEAKFLNFND 245
Query: 306 SSKVIVFTDGEITVE-----PDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
+IV ++ +E ++GT+ I + +K +L G SVL L G
Sbjct: 246 GKAIIVTSNDNRELEKIKEYKNLGTRFI-FLEGKIFKMKDILKELGKLGIDSVL--LEGG 302
Query: 361 YGDLEMLLKEGI 372
G + KE I
Sbjct: 303 SGLISTAFKENI 314
>gi|365540557|ref|ZP_09365732.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Vibrio
ordalii ATCC 33509]
Length = 365
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 123/190 (64%), Gaps = 3/190 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R +ELA V +T PNP VGCVI + +IVGEGFH +AG+PHAEV ALR A E A+GA
Sbjct: 10 MSRAIELAKGGVFTTQPNPNVGCVITQGEQIVGEGFHARAGEPHAEVHALRMAKEQAQGA 69
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC E LI AKV KV+ M DPNP V +G++ LRDAGI+V VG+
Sbjct: 70 TAYVTLEPCSHHGRTPPCAEGLINAKVAKVICAMQDPNPQVAGRGIQMLRDAGIEVEVGL 129
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDAI 260
+ LN FI R+ +G PF L+ S++G G+ + + +Q++ A
Sbjct: 130 LEADAIALNPGFIKRMTSGMPFVQLKMAASLDGQTALNNGQSQWITSAAARRDVQKFRAK 189
Query: 261 ---ILSASST 267
ILS S T
Sbjct: 190 AGGILSTSKT 199
>gi|384426535|ref|YP_005635892.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
raphani 756C]
gi|341935635|gb|AEL05774.1| riboflavin biosynthesis protein RibD [Xanthomonas campestris pv.
raphani 756C]
Length = 364
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 122/195 (62%), Gaps = 3/195 (1%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M + + +A + +T PNPMVGCVIV+DG VGEGFH +AG PHAEVFALR AGE
Sbjct: 6 DDHRWMAQALRVAERGGYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHAEVFALRAAGE 65
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC HYGRTPPC ALI A V +VV M DP P VN G LRDAGI
Sbjct: 66 QARGATAYVTLEPCAHYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGFTLLRDAGIQ 125
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
V GV + + LN+ F+ R+ G+P+ ++ S++G GE +G +Q
Sbjct: 126 VHSGVMEAQARALNQGFLSRVERGRPWVRVKLGASLDGRTAMASGESKWITGADARADVQ 185
Query: 256 EYDA---IILSASST 267
+ A +IL+ + T
Sbjct: 186 RWRARAGVILTGAGT 200
>gi|384457317|ref|YP_005669737.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
pirimidine reductase) [Clostridium acetobutylicum EA
2018]
gi|325508006|gb|ADZ19642.1| Riboflavin biosynthesis protein RIBD (pirimidine deaminase and
pirimidine reductase) [Clostridium acetobutylicum EA
2018]
Length = 365
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 192/367 (52%), Gaps = 28/367 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
+M+R +E+A K G +PNPMVG VIVKD KIVGEG+H K G HAEV AL AG+ AEG
Sbjct: 5 FMKRALEIAEKGSGYVNPNPMVGAVIVKDNKIVGEGYHEKFGGNHAEVNALNMAGKDAEG 64
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+ YV+LEPC+HYG+TPPC A++KA +K+V++ M DPNP+V++KG++ L++ GI+V G
Sbjct: 65 SELYVTLEPCSHYGKTPPCALAVVKAGIKRVIIAMEDPNPLVSTKGIKILKENGIEVITG 124
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
V + ++LNE FI I T +PF T++ +++G + GE SG Y L
Sbjct: 125 VMKKESEKLNEVFIKYITTKRPFITMKMASTLDGKICTVSGESRWISGQTSRKYVHHLRS 184
Query: 256 EYDAIIL---SASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVF 312
+Y +I++ +A + + + P II S P + + K+I+
Sbjct: 185 KYMSIMVGVGTAINDNPLLTTRIEGENVRSPIAIIVDSKLRVPKDLRIFNTLQERKIIIA 244
Query: 313 TD--GEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKE 370
T + E ++ G+ + N + LDY L+D G G +LL+
Sbjct: 245 TTEYADKNKENELINMGVSIIKTPNKNGRVNLDY---------LLDELGKIGIDSVLLEG 295
Query: 371 GIEQNL-------LQKIVVEVLPVWNGSD---GGNPHTLLNSLGKRLILKNLQPKMSSQS 420
G E N + KI+ + P+ G + G + L + + ++ + +
Sbjct: 296 GSELNFSFIKEENIDKIMCFIAPMIVGGEKAKGAVGGKGIEKLKDSIKIYDMDSEKIGED 355
Query: 421 IVLEGYL 427
I++ GYL
Sbjct: 356 ILVSGYL 362
>gi|317047149|ref|YP_004114797.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b]
gi|316948766|gb|ADU68241.1| riboflavin biosynthesis protein RibD [Pantoea sp. At-9b]
Length = 370
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DERYMARALELARRGCFTTTPNPNVGCVIVRDGEIVGEGWHHRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIAV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ + +N F+ R+ TG P+ L+ S++G GE + + +Q
Sbjct: 123 SHGLMMNAAEAINRGFLKRMRTGFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQR 182
Query: 257 YDA---IILSASST 267
+ A IL+ S+T
Sbjct: 183 FRAQSSAILTTSAT 196
>gi|254375242|ref|ZP_04990722.1| hypothetical protein FTDG_01434 [Francisella novicida GA99-3548]
gi|151572960|gb|EDN38614.1| hypothetical protein FTDG_01434 [Francisella novicida GA99-3548]
Length = 355
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 180/326 (55%), Gaps = 24/326 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL A +
Sbjct: 5 DKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGEAHAEVHALTKAVDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPCT+ +IKA +KKV++ LDPNP V KG+ERL++AGI V
Sbjct: 65 AKGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G + G+ ++ + + +
Sbjct: 125 EVGLLEKQAQELNKIFFHYQTTKKPFVYAKWAMSLDGKIAVNDGDSKKISSHQAFVNTHE 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPIRIPGLSEESSSKV 309
L DAI++ + + + N+ P R I ++NH + I +
Sbjct: 185 LRNICDAILIGKQTLIDDNPSLDVRININKIKHPTRFI-LANHMTTIDHNWRVLDQRHAK 243
Query: 310 IVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFC-SVLVDLRGNYGDLEMLL 368
+F +I+ + + TK L+QL ++ L H C L++ GN G +L+
Sbjct: 244 TIFVCSKISAQ--VATK------LNQLGIEYWLFPQSQHQVCLDTLLEKMGNIGITSLLV 295
Query: 369 KEG-------IEQNLLQKIVVEVLPV 387
+ G I Q L+ + + PV
Sbjct: 296 EGGNKTLNSFINQKLVNEFYTYLAPV 321
>gi|153855732|ref|ZP_01996746.1| hypothetical protein DORLON_02764 [Dorea longicatena DSM 13814]
gi|149751955|gb|EDM61886.1| riboflavin biosynthesis protein RibD [Dorea longicatena DSM 13814]
Length = 378
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 166/308 (53%), Gaps = 27/308 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA K G T+PNPMVG VIVKDG+I+GEG+H K G+ HAE A+ E
Sbjct: 3 DQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKCGELHAERNAIASLTES 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC HYG+TPPCTEA+I+ K+KKVV+G DPNP V KG + LR++GI V
Sbjct: 63 AEGATIYVTLEPCCHYGKTPPCTEAIIEQKIKKVVIGSRDPNPKVAGKGAQILRESGITV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
E C LN F H I T P+ ++Y ++++G + + G +G Q +Q
Sbjct: 123 VQDFMREECDCLNPVFFHYITTKTPYVVMKYAMTLDGKIATKTGASKWITGEPARQEVQH 182
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDAN-------QPFRIITVSNHASPIRIPGLSEES 305
Y I+ + + +P N P RI+ S+ P+ +
Sbjct: 183 MRHRYMGIMAGIGTV------LADDPMLNVRVEGWKSPVRIVCDSSLRIPLDSQIVRSAK 236
Query: 306 SSKVIVFTDG-----EITVEPD-MGTKGIETV----NLHQLNLKAVLDYCYSHGFCSVLV 355
+ IV G EIT + + + KG++TV Q++LK ++ Y + G S+L+
Sbjct: 237 EYRTIVAYAGREENEEITEKIERLHAKGVDTVCCPDEKGQIDLKKLMTYLGNEGIDSILL 296
Query: 356 DLRGNYGD 363
+ G D
Sbjct: 297 EGGGTLND 304
>gi|256846007|ref|ZP_05551465.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_36A2]
gi|256719566|gb|EEU33121.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_36A2]
Length = 369
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 170/301 (56%), Gaps = 23/301 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +G +PNP+VG VIVKDGKI+GEG+H K G PHAEV+AL +AGE
Sbjct: 6 DEKYMARAIELAKRGIGGVNPNPLVGAVIVKDGKIIGEGWHKKFGGPHAEVWALNEAGEN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC+H G+TPPC + +++ +K+ VV +DPNP+V KG++ + DAGI+V
Sbjct: 66 AEGATIYVTLEPCSHQGKTPPCAKRIVEVGIKRCVVACIDPNPLVAGKGIKIMEDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
+GV ++ K +N+ F+ I P+ L+ ++++G + + G+ + + +Q
Sbjct: 126 ELGVLEKEAKDVNKIFLKYIENKIPYLFLKCGITLDGKIATRSGKSKWITNEIAREKVQF 185
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQ-------PFRIITVSNHASPIRIPGLSEES 305
++ AI++ ++ K + D + PFR++ N SPI
Sbjct: 186 LRTKFMAIMVGINTVLKDNPSLDSRLDEEKSGIEKRNPFRVVIDPNLESPIE-------- 237
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+K + F DG+ + KG+E + ++ NL + + G + D+ G LE
Sbjct: 238 -AKFLNFNDGKAIIITSNDNKGLEKIEKYK-NLGT--RFIFLEGKIFKMEDILKELGKLE 293
Query: 366 M 366
+
Sbjct: 294 I 294
>gi|254303903|ref|ZP_04971261.1| diaminohydroxyphosphoribosylaminopyrimidine/5-amino-6-(5-
phosphoribosylamino)uracil reductase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
gi|148324095|gb|EDK89345.1| diaminohydroxyphosphoribosylaminopyrimidine/5-amino-6-(5-
phosphoribosylamino)uracil reductase [Fusobacterium
nucleatum subsp. polymorphum ATCC 10953]
Length = 369
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 168/301 (55%), Gaps = 23/301 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +G +PNP+VG V+VKDGKI+GEG+H K G PHAEV+AL +AGE
Sbjct: 6 DEKYMARAIELAQKGIGGVNPNPLVGAVVVKDGKIIGEGWHKKFGGPHAEVWALNEAGEN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC+H G+TPPC +++A +K+ VV +DPNP+V KG++ + +AGID+
Sbjct: 66 AEGATIYVTLEPCSHQGKTPPCARRIVEAGIKRCVVACIDPNPLVAGKGMKIIEEAGIDI 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+GV ++ K +N+ F+ I P+ L+ ++++G + + G+ E Q
Sbjct: 126 KLGVLEKEAKDVNKIFLKYIENKVPYLFLKCGITLDGKIATRSGKSKWITNEIAREKVQF 185
Query: 254 LQ-EYDAIILSASSTKKYSIPASQEPDANQ-------PFRIITVSNHASPIRIPGLSEES 305
L+ ++ AI++ ++ K + D + PFR++ N SPI
Sbjct: 186 LRTKFMAIMVGINTVLKDNPSLDSRLDEEKFGIEKRNPFRVVIDPNLESPIE-------- 237
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+K + F D + + K +E + +++ K + + G + D+ G LE
Sbjct: 238 -AKFLNFNDNKAIIVTSSDNKNLEKIKVYE---KLGTKFIFLEGKTFKMEDILKELGKLE 293
Query: 366 M 366
+
Sbjct: 294 I 294
>gi|359411457|ref|ZP_09203922.1| riboflavin biosynthesis protein RibD [Clostridium sp. DL-VIII]
gi|357170341|gb|EHI98515.1| riboflavin biosynthesis protein RibD [Clostridium sp. DL-VIII]
Length = 362
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 195/361 (54%), Gaps = 19/361 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM R ++LA +G +PNP+VG VIVKD K++GEG+H G+ HAE A+++A E EG
Sbjct: 5 YMERALKLAKMGIGRVNPNPLVGAVIVKDNKLIGEGYHECYGEAHAERNAVKNATEDVEG 64
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+T YV+LEPC H+G+TPPC + LI+ K KKVV+GMLDPN +V K +E+L+ GI+V VG
Sbjct: 65 STIYVTLEPCAHHGKTPPCVDLLIEKKFKKVVIGMLDPNELVAGKSIEKLKQHGIEVIVG 124
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
V++E CK++NE FI I T PF L+ +S++G + GE ++ SQ ++
Sbjct: 125 VKEEECKKMNEIFIKYITTKIPFVILKSGMSLDGKIATYSGESKWITSKESRADSQNIRN 184
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT- 313
+ I+ +T P + + RII +N P+ + E + ++ +
Sbjct: 185 RVSSIMVGVNTVIADDPELTCRINSEKKLIRIIVDTNLRIPLDSKVVKNEDKNTIVATSI 244
Query: 314 ---DGEITVEPDMGTKGIETVNL-HQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
+ + + +G K IE + ++++LK +L G SVL++ G L
Sbjct: 245 DSDENKKQLLRGLGVKVIEVASKNNRVDLKELLKKLGEEGIDSVLIEGGGT------LNF 298
Query: 370 EGIEQNLLQKIVVEVLPVWNGSDGGNPHTL---LNSLGKRLILKNLQPKMSSQSIVLEGY 426
+++N++ K++ + P G + + L + + L N+ + +++EGY
Sbjct: 299 SALKENIVDKVIFYIAPKILGGEQSKSSIAGQGFSKLSEAVKLMNISYGNIGEDLIIEGY 358
Query: 427 L 427
+
Sbjct: 359 I 359
>gi|319786233|ref|YP_004145708.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis
11-1]
gi|317464745|gb|ADV26477.1| riboflavin biosynthesis protein RibD [Pseudoxanthomonas suwonensis
11-1]
Length = 365
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 126/204 (61%), Gaps = 3/204 (1%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M R ++LA + + + PNP+VGCV+ KDG +VGEG+HP+AG+PHAEVFALR+A
Sbjct: 6 DAFDHACMARALQLAARGLYTARPNPVVGCVVAKDGAVVGEGWHPRAGEPHAEVFALREA 65
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE A GATAYV+LEPC H+GRTPPC EAL++A V +VV M DP P V+ G RL+ AG
Sbjct: 66 GERARGATAYVTLEPCAHHGRTPPCAEALVQAGVARVVAAMRDPFPRVDGAGFARLQAAG 125
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQL 253
I V G+ + + LN F+ R G+P+ ++ S++G GE +G
Sbjct: 126 IAVAAGLMEGQARDLNRGFLSRFTRGRPWLRVKLAASLDGRTAMASGESKWITGEAARAD 185
Query: 254 LQEYDA---IILSASSTKKYSIPA 274
+Q + A IL+ + T PA
Sbjct: 186 VQRWRARSGAILTGADTVLADDPA 209
>gi|333376545|ref|ZP_08468319.1| riboflavin biosynthesis protein RibD [Kingella kingae ATCC 23330]
gi|332967791|gb|EGK06895.1| riboflavin biosynthesis protein RibD [Kingella kingae ATCC 23330]
Length = 360
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/256 (41%), Positives = 142/256 (55%), Gaps = 21/256 (8%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R +ELA + STSPNP VGCVI +I+G+GFH +AG PHAEV A+R AGEL
Sbjct: 8 DTQHMQRALELAWQGRFSTSPNPRVGCVIAHGSQIIGQGFHVQAGSPHAEVHAIRQAGEL 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC E LI A V +VV M DPNP+V KGL L+ AGI V
Sbjct: 68 ARGATAYVTLEPCSHYGRTPPCAEGLIAAGVSRVVAAMTDPNPLVAGKGLAMLQAAGIMV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QL 253
G+ + ++LN F+ RI +PF +L+ S++G G+ +G Q+
Sbjct: 128 EQGLLEHEARQLNRGFLSRIERNRPFVSLKIAASLDGKTALSNGQSQWITGAAARADVQI 187
Query: 254 LQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
+ +L+ T P P QP R++ S +P SS +I
Sbjct: 188 QRAQSCAVLTGIGTVLADNPRLNVRDFPTVRQPLRVVLDSQLRTP---------KSSHII 238
Query: 311 VFTDGE----ITVEPD 322
DG+ IT PD
Sbjct: 239 --QDGQRTLIITTSPD 252
>gi|150388845|ref|YP_001318894.1| riboflavin biosynthesis protein RibD [Alkaliphilus metalliredigens
QYMF]
gi|149948707|gb|ABR47235.1| riboflavin biosynthesis protein RibD [Alkaliphilus metalliredigens
QYMF]
Length = 366
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 195/370 (52%), Gaps = 34/370 (9%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMR+ +ELA K G T+PNP+VG VIVK+ K++GEG+H G PHAEV A +A E +G
Sbjct: 5 YMRKAIELAKKGTGHTNPNPLVGAVIVKNNKVIGEGYHHYYGGPHAEVDAFNNATEDVKG 64
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+HYG+TPPC +A+++ + +VV+ M DPNP+V G+ LR++GI+V
Sbjct: 65 ATMYVTLEPCSHYGKTPPCAKAIVEKGIAQVVIAMRDPNPLVAGNGIGILRESGIEVISE 124
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQLLQ 255
V + K LNE F+ I T PF L+ ++++G + G+ ES Y ++
Sbjct: 125 VLESEAKNLNEIFVKYITTEMPFCILKTAMTLDGKIATATGDSKWITNEESRQYVHEIRH 184
Query: 256 EYDAIILSASST---KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVF 312
+ +I++ + + + P R+I + +P+ L S + I+
Sbjct: 185 QVSSIMVGIGTVLVDDPQLTTRLHNQEGSDPIRVIVDTEAKTPLWAQVLQLSSKVRTIIA 244
Query: 313 TDGEITVEPD----MGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
T + +P+ + KG E + + +Q++LK ++ + G SVL++ D
Sbjct: 245 TTEK--ADPNKIKALEEKGAEVIIIPLKNNQVDLKCLIQQLGAKGIDSVLIEGGATLND- 301
Query: 365 EMLLKEGIEQNLLQKIVVEVL-------PVWNGSDGGNPHTLLNSLGKRLILKNLQPKMS 417
L+EGI ++ I +++ PV G DG + + + L ++Q +
Sbjct: 302 -SALQEGIVDKVVSFIAPKIVGGAKAKTPV--GGDG------IKYMKDAIQLTDIQVRKF 352
Query: 418 SQSIVLEGYL 427
Q I++EGYL
Sbjct: 353 GQDIMIEGYL 362
>gi|423097585|ref|ZP_17085381.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q2-87]
gi|397886429|gb|EJL02912.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
Q2-87]
Length = 377
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG++VGEG+H +AG+PHAEV ALR AG
Sbjct: 11 DAHYMARALELARRGHYTTHPNPRVGCVIVRDGEVVGEGWHIRAGEPHAEVHALRAAGVK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LNE F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|346308910|ref|ZP_08851014.1| riboflavin biosynthesis protein RibD [Dorea formicigenerans
4_6_53AFAA]
gi|345901459|gb|EGX71258.1| riboflavin biosynthesis protein RibD [Dorea formicigenerans
4_6_53AFAA]
Length = 375
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 173/323 (53%), Gaps = 36/323 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+R +ELA K G T+PNPMVG VIVKDG+I+GEG+H + G+ HAE A+ E
Sbjct: 3 DQDYMKRAIELAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHARCGELHAERNAIASLTES 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC HYG+TPPCTEA+++ K+KKVV+G DPNP V KG + LRDAG+ V
Sbjct: 63 AEGATLYVTLEPCCHYGKTPPCTEAILEQKIKKVVIGSRDPNPKVAGKGAKILRDAGVAV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ C LN F H I T P+ ++Y ++++G + + G E+ Q
Sbjct: 123 VEDFMRDKCDELNPIFFHYITTKTPYVVMKYAMTLDGKIATKTGASKWITQEAARREVQY 182
Query: 254 LQ-EYDAIILSASSTKKYSIPASQEPDAN-------QPFRIITVSNHASPIRIPGLSEES 305
++ Y I++ + + +P N P RII S +RIP S+
Sbjct: 183 MRHRYMGIMVGIGTV------LADDPMLNVRVEGLKSPVRIIC----DSKLRIPLDSQIV 232
Query: 306 SSK-----VIVFTDGEITVEPD---MGTKGIETVNL----HQLNLKAVLDYCYSHGFCSV 353
S ++ + D E VE + T G+ETV +NLK +++Y S+
Sbjct: 233 KSAREYRTIVAYADLE-NVEKKKEILQTMGVETVFCPDMKKHVNLKHLMEYLGKENIDSI 291
Query: 354 LVDLRGNYGDLEMLLKEGIEQNL 376
L++ G D L+ G+ Q +
Sbjct: 292 LLEGGGTLND--SALRAGVVQEV 312
>gi|319897565|ref|YP_004135762.1| riboflavin biosynthesis protein ribd [Haemophilus influenzae F3031]
gi|317433071|emb|CBY81445.1| riboflavin biosynthesis protein RibD [Haemophilus influenzae F3031]
Length = 372
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 138/234 (58%), Gaps = 18/234 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M+R ++LA K +T+PNP VGCV+VK+G+IVGEGFH KAGQPHAE AL AGE
Sbjct: 8 DCVFMQRALDLAAKGQYTTTPNPSVGCVLVKNGEIVGEGFHFKAGQPHAERVALAQAGEN 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC HYGRT PC LI+A V KV+ M DPNP V KGL+ L DAGI+
Sbjct: 68 AKGATAYVTLEPCAHYGRTSPCALGLIEAGVVKVIAAMQDPNPQVAGKGLKMLSDAGIES 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
V + ++ +++N+ F+ R+ G PF L+ +S++G GE + Q
Sbjct: 128 AVNLLNDQAEKINKGFLKRMRQGMPFVQLKLAMSLDGRTAMASGESKWITSPDARSDVQK 187
Query: 254 LQEYDAIILSASSTKKYSIPA---------------SQEPDANQPFRIITVSNH 292
++ + +LS S+T P+ ++ D QP R+I S H
Sbjct: 188 MRAKSSALLSTSTTVIADDPSLNVRWDEFPENLKTEYKKEDLRQPVRVILDSQH 241
>gi|312171548|emb|CBX79806.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora ATCC BAA-2158]
Length = 367
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCV+V+D +IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEAYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+H+GRTPPC EALI A VK+VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 SRGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGMMMPEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ + ILS S+T PA
Sbjct: 183 LRAQSSAILSTSATVLADNPA 203
>gi|401678844|ref|ZP_10810798.1| riboflavin biosynthesis protein RibD [Enterobacter sp. SST3]
gi|400213940|gb|EJO44872.1| riboflavin biosynthesis protein RibD [Enterobacter sp. SST3]
Length = 367
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAEALNKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S T PA
Sbjct: 183 LRAQSHAILTSSETVLADDPA 203
>gi|398918102|ref|ZP_10658339.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM49]
gi|398171894|gb|EJM59784.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM49]
Length = 377
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+ G+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHFMARALELARKGHYTTHPNPRVGCVIVQGGQIVGEGWHVRAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLESEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|291295639|ref|YP_003507037.1| riboflavin biosynthesis protein RibD [Meiothermus ruber DSM 1279]
gi|290470598|gb|ADD28017.1| riboflavin biosynthesis protein RibD [Meiothermus ruber DSM 1279]
Length = 384
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D Y+RR ++LA + G T PNP+VG V+VK+G+IVGEG+HP+AG+PHAEVFAL AGE
Sbjct: 11 DERYLRRALQLAERGRGHTHPNPLVGAVLVKNGRIVGEGYHPRAGEPHAEVFALHQAGEE 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YVSLEPC+H+GRTPPC+ AL++A V +VVV DPNP GLERLR AG+ V
Sbjct: 71 AQGATLYVSLEPCDHHGRTPPCSLALLEAGVGRVVVAARDPNPKAQG-GLERLRSAGVAV 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+G+ + + NE F H + +PF + LS++G V + G S ++ Q
Sbjct: 130 ELGLLEAEARAQNEVFFHALRRRRPFVLWKAALSLDGQVATRSGHAAWVSNALSRRVAQG 189
Query: 257 Y 257
Y
Sbjct: 190 Y 190
>gi|398842987|ref|ZP_10600152.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM102]
gi|398104655|gb|EJL94786.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM102]
Length = 377
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCV+V+DG+IVGEG+H + G+PHAEV ALR AG+
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHVRTGEPHAEVHALRGAGDK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAEASVVLTGADT 204
>gi|429109218|ref|ZP_19170988.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter malonaticus 507]
gi|426310375|emb|CCJ97101.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter malonaticus 507]
Length = 209
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 116/165 (70%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA + +T PNP VGCVIVKDG IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEFYMARALKLAGQGRFTTHPNPRVGCVIVKDGVIVGEGFHLRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|385792038|ref|YP_005825014.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676184|gb|AEB27054.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Francisella cf. novicida Fx1]
Length = 355
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 182/326 (55%), Gaps = 24/326 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL A +
Sbjct: 5 DKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGEAHAEVHALTKAVDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPCT+ +IKA +KKV++ LDPNP V KG+ERL++AGI V
Sbjct: 65 AKGATAYVTLEPCCHHGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G + G+ ++ + + +
Sbjct: 125 EVGLLEKQAQELNKIFFHYQTTKKPFVYGKWAMSLDGKIAVNDGDSKKISSHQAFVNTHE 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPI----RIPGLSEES 305
L DAI++ + + + + N+ P R I ++NH + I R+ L +
Sbjct: 185 LRNICDAILIGKQTLIDDNPSLNVRININKIKHPTRFI-LANHLTTINHNWRV--LDQRH 241
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ + V + V + GIE L HQ+ L +L+ + G S+LV+ GN
Sbjct: 242 AKTIFVCSKISAQVATKLNQLGIEYWLLPQSQHQVCLDTLLEKMGNIGITSLLVE-GGN- 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLPV 387
L I Q L+ + + PV
Sbjct: 300 ----KTLNSFINQKLVNEFYTYLAPV 321
>gi|73748880|ref|YP_308119.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1]
gi|147669641|ref|YP_001214459.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. BAV1]
gi|452203863|ref|YP_007483996.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
DCMB5]
gi|452205360|ref|YP_007485489.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
BTF08]
gi|73660596|emb|CAI83203.1| riboflavin biosynthesis protein RibD [Dehalococcoides sp. CBDB1]
gi|146270589|gb|ABQ17581.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. BAV1]
gi|452110922|gb|AGG06654.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
DCMB5]
gi|452112416|gb|AGG08147.1| Riboflavin biosynthesis protein RibD [Dehalococcoides mccartyi
BTF08]
Length = 365
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 198/370 (53%), Gaps = 32/370 (8%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM + + LA A+G SPNP VG VIVK+G++VG+GF G HAE+ AL+ A E A+G
Sbjct: 3 YMSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEKAKG 62
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC H GRTPPCT ++I + +K+V + LD NP+V+ KG + L DAGI V +G
Sbjct: 63 ATLYVTLEPCCHQGRTPPCTGSVIASGIKEVYIATLDDNPLVSGKGKKELEDAGIKVHLG 122
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
+ + +++NEA+ + TG PF T +Y +S++G + G+ E +++ ++
Sbjct: 123 MMEREARQMNEAYFKHVTTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYIRH 182
Query: 257 YDAIILSASSTKKYSIP--------ASQEPDANQPFRIITVSNHASPI-----RIPGLSE 303
+I++ +T P +QP R+I N +P+ +PG +
Sbjct: 183 ISDVIMAGLNTILKDDPHLTARVNCGRGGTSHSQPTRVIIDDNGRAPLSSNVFHVPGNTI 242
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQL-NLKAVLDYCYSHGFCSVLVDLRGNYG 362
+ +K + T E ++G K +E + L +LKA+L Y +G SVLV+ G
Sbjct: 243 VAVAKGL--TPEEKQAYDEVGAKVVELPDERGLVDLKALLRYLGQNGVTSVLVEGGG--- 297
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMS 417
++L + L+ K++V V P+ G G + + +G LI K++ +
Sbjct: 298 ---IVLGSLFDLKLVDKVLVFVAPIIIG--GKDAKIPVAGVGAELITDSAKFKDITTTIF 352
Query: 418 SQSIVLEGYL 427
Q +++ GY+
Sbjct: 353 GQDVLISGYV 362
>gi|292487445|ref|YP_003530317.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Erwinia amylovora CFBP1430]
gi|292898687|ref|YP_003538056.1| riboflavin biosynthesis protein RibD [Erwinia amylovora ATCC 49946]
gi|428784379|ref|ZP_19001870.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora ACW56400]
gi|291198535|emb|CBJ45643.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase]
[Erwinia amylovora ATCC 49946]
gi|291552864|emb|CBA19909.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora CFBP1430]
gi|426275941|gb|EKV53668.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Erwinia amylovora ACW56400]
Length = 367
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 129/201 (64%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCV+V+D +IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEAYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHMRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GATAYV+LEPC+H+GRTPPC EALI A VK+VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 SRGATAYVTLEPCSHHGRTPPCCEALIAAGVKRVVTAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMPEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ + ILS S+T PA
Sbjct: 183 LRAQSSAILSTSATVLADNPA 203
>gi|398860823|ref|ZP_10616467.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM79]
gi|398234263|gb|EJN20146.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM79]
Length = 377
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCV+V+DG+IVGEG+H + G+PHAEV ALR AG+
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVVVRDGQIVGEGWHVRTGEPHAEVHALRAAGDK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAEASVVLTGADT 204
>gi|398874787|ref|ZP_10629987.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM74]
gi|398194010|gb|EJM81095.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM74]
Length = 377
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+ G+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHFMARALELARKGQYTTHPNPRVGCVIVQGGQIVGEGWHERAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|429092484|ref|ZP_19155112.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter dublinensis 1210]
gi|426742683|emb|CCJ81225.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter dublinensis 1210]
Length = 367
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 114/165 (69%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R + LA + +T PNP VGCVIVKDG IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEFYMARALTLAGQGRFTTHPNPRVGCVIVKDGAIVGEGFHLRAGEPHAEVHALRMAGDR 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV
Sbjct: 63 RRGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|225023912|ref|ZP_03713104.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC
23834]
gi|224943386|gb|EEG24595.1| hypothetical protein EIKCOROL_00778 [Eikenella corrodens ATCC
23834]
Length = 364
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 170/322 (52%), Gaps = 25/322 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M++ + LA + STSPNP VGCVI + G+IVG+GFH KAG+PHAEV ALR AG
Sbjct: 8 DHALMQQAIALAWQGRFSTSPNPRVGCVIAQGGQIVGQGFHLKAGEPHAEVHALRQAGSA 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H+GRTPPC EALI+A V++VV M DPNP+V KGL L AGI V
Sbjct: 68 AQGATAYVTLEPCAHHGRTPPCAEALIRAGVRRVVAAMQDPNPLVVGKGLAILEAAGIQV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
G+ + ++LN F+ RI G+PF L+ S++G G+ E+ + Q+
Sbjct: 128 ACGLMEREARQLNRGFLSRIERGRPFVKLKTAASLDGKTALANGQSQWITGEAARHDVQI 187
Query: 254 LQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSE--ESSSK 308
+ +L+ T P P P R++ S +R+P S + S+
Sbjct: 188 QRAESCAVLTGIGTVLADNPRLTVRDFPTLRPPLRVLLDSR----LRLPAGSHLLDGSAP 243
Query: 309 VIVFTDGEITVEPDMGTKG----IETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDL 364
+++T ++ P +E +L+L AVL + G ++++ G
Sbjct: 244 TLIYT---LSDRPAPAGAAEICRLEADAQGRLSLNAVLADLAARGIGELMLEAGATLG-- 298
Query: 365 EMLLKEGIEQNLLQKIVVEVLP 386
+ Q+L+ +IV P
Sbjct: 299 ----SAFLAQDLVDEIVCYQAP 316
>gi|37527755|ref|NP_931100.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36787191|emb|CAE16271.1| riboflavin biosynthesis protein [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase);
5-amino-6-(5-phosphoribosylamino)uracil reductase (HTP
reductase)] [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 369
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 26/261 (9%)
Query: 72 NNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALR 131
NNDK YM R +ELA + +TSPNP VGCVIV DG+IVGEGFH ++G+PHAEV+AL+
Sbjct: 2 NNDKK---YMARALELARQGRFTTSPNPNVGCVIVHDGQIVGEGFHLRSGEPHAEVYALQ 58
Query: 132 DAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRD 191
AG+ A+GAT YV+LEPC+H+G+TPPC +ALI A V +VV M DPNP V +GL +L+
Sbjct: 59 IAGDKAKGATVYVTLEPCSHHGKTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLYKLQQ 118
Query: 192 AGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS 251
AGI V G+ E + LN F+ R+ TG P+ L+ S++G GE +
Sbjct: 119 AGIAVEHGLMMEEAESLNRGFLKRMRTGFPYIQLKMATSLDGRTALASGESKWITSPQAR 178
Query: 252 QLLQEYDA---IILSASSTKKYSIP-------------ASQEPDAN--QPFRIITVS-NH 292
+Q++ A ILS+SST P + P+ N QP R+I S N
Sbjct: 179 CDVQKFRAQCSAILSSSSTVLADDPHLTVRWSELDAEIQAVYPEENLCQPVRVIVDSQNR 238
Query: 293 ASP----IRIPGLSEESSSKV 309
SP I+ PG + +KV
Sbjct: 239 VSPQHQVIQQPGYCWLARTKV 259
>gi|426411726|ref|YP_007031825.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. UW4]
gi|426269943|gb|AFY22020.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. UW4]
Length = 377
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R +ELA K +T PNP VGCVIV+ G+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 11 DAHFMARALELARKGHYTTDPNPRVGCVIVQGGQIVGEGWHERAGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|118580019|ref|YP_901269.1| riboflavin biosynthesis protein RibD [Pelobacter propionicus DSM
2379]
gi|118502729|gb|ABK99211.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Pelobacter
propionicus DSM 2379]
Length = 367
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 174/340 (51%), Gaps = 26/340 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD M+R + LA + +G TSPNP VGCVIVKDG IVG G+H KAG HAE+ AL AGE
Sbjct: 3 DDIRQMKRALALARRGIGKTSPNPAVGCVIVKDGVIVGTGWHRKAGTSHAEIHALEMAGE 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GA +V+LEPC H G+TPPC++ALI+A V++VV GM DPNP V+ GL L AGI
Sbjct: 63 SARGADVFVTLEPCCHTGKTPPCSQALIRAGVRRVVAGMSDPNPRVSGGGLAELETAGIQ 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE----GVAESGGYYS 251
V GV ++ C+ LN FI ++ TG P T + ++++G + G ES
Sbjct: 123 VVCGVLEKECRDLNRPFIKQVTTGMPHVTYKCAMTLDGKIATVSGASRWISCQESRTLVH 182
Query: 252 QLLQEYDAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
++ DAI++ + + + P R++ + +P + L + ++ +
Sbjct: 183 RMRARMDAIMVGVDTIIADDPQLTVRHVRGRNPLRVVVDTRLRTPESVRVLGDGNAVNTL 242
Query: 311 VFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLR---GNYGDLEML 367
+ T + V+L N A + C + DL G G +L
Sbjct: 243 IAT-----------AETNPRVHLRYQNQGATILVCDQENGRVSMKDLMFKLGKRGVQSIL 291
Query: 368 LKEG-------IEQNLLQKIVVEVLPVWNGSDGGNPHTLL 400
L+ G +EQ L+ + V + P GSDG +P +L+
Sbjct: 292 LEGGGRLAGSMLEQGLIDEFVFFLAPKILGSDGFSPFSLV 331
>gi|125972628|ref|YP_001036538.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Clostridium thermocellum ATCC 27405]
gi|125712853|gb|ABN51345.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum ATCC
27405]
Length = 365
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 198/367 (53%), Gaps = 26/367 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
F+M R ++LA G T+PNP+VG V+VKDGKI+ EG+H + G PHAEV A +A E
Sbjct: 6 FFMSRAIKLAKLGWGKTNPNPLVGAVVVKDGKIIAEGYHKQLGGPHAEVEAFNNAKEDVA 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+HYGRTPPC + +I +KKVV + DPNP V+ +G E L++AGI+V V
Sbjct: 66 GGTLYVNLEPCSHYGRTPPCAQKIIDVGIKKVVAAIKDPNPKVSGRGFEMLKNAGIEVEV 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQ 255
GV +E RLNE FI IV KPF L+ ++++G + G+ E + +++
Sbjct: 126 GVLEEEAIRLNEIFITYIVKKKPFVILKTAMTLDGKIATASGDSKWVTGEKARNHVHVIR 185
Query: 256 EYDAIILSASSTKKYSIP--ASQEPD--ANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
+ A ++ +T P ++ PD + P RI+ S + P+ ++ S + VI+
Sbjct: 186 DRVAAVMVGINTVLKDNPYLTTRLPDKEGSDPVRIVVDSKGSIPLDSNVINSNSKAGVIL 245
Query: 312 FTDGEITVEPD--MGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
T I E + + KG++ + +++LK ++D Y SVL++ G
Sbjct: 246 ATTSRIDKEKEKMLIDKGVKIIKADGSDGRVDLKLLMDELYKLEIDSVLLEGGGT----- 300
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG-----KRLILKNLQPKMSSQS 420
L I ++ K++ + P G G N T + +G + + +KN+ +
Sbjct: 301 -LNSSAISAGIVDKVMCFISPKIVG--GENAPTSVEGIGALRMCEAIGVKNISVVKFGED 357
Query: 421 IVLEGYL 427
I+LEGY+
Sbjct: 358 ILLEGYI 364
>gi|359396874|ref|ZP_09189924.1| Riboflavin biosynthesis protein ribD [Halomonas boliviensis LC1]
gi|357968668|gb|EHJ91117.1| Riboflavin biosynthesis protein ribD [Halomonas boliviensis LC1]
Length = 394
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 147/253 (58%), Gaps = 15/253 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA K + +T PNP VGCVIV+D +IVGEGFH +AG+PHAE+ AL DAGE
Sbjct: 9 DHRYMARALQLALKGLYTTDPNPRVGCVIVRDEQIVGEGFHLRAGEPHAEIHALNDAGER 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H GRT PC AL A V +VV+ M+DPNP V+ +G+ L++ G++V
Sbjct: 69 AQGATAYVTLEPCSHTGRTGPCAVALKDASVSRVVIAMVDPNPQVSGRGIRMLKEGGVEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG--------- 247
VG+ + + LN FI R+ +PF L+ +S++G GE +G
Sbjct: 129 AVGLLESEARSLNPGFIARMSHQRPFVRLKMAMSLDGRTAMGSGESQWITGPEARTQVQR 188
Query: 248 --GYYSQLLQEYDAIILSAS--STKKYSIPASQEPDA--NQPFRIITVSNHASPIRIPGL 301
S +L +++I+ S + +K + D QP R+I ++ P+ L
Sbjct: 189 LRARSSAILSGVESLIMDDSRLTLRKEQLHLDNVDDVVRRQPLRVILDTHLRLPLAAACL 248
Query: 302 SEESSSKVIVFTD 314
SE + VI D
Sbjct: 249 SEPGRTLVITTPD 261
>gi|194016088|ref|ZP_03054703.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
gi|194012443|gb|EDW22010.1| riboflavin biosynthesis protein RibD [Bacillus pumilus ATCC 7061]
Length = 361
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/357 (34%), Positives = 185/357 (51%), Gaps = 17/357 (4%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
KDD FYM+ + A G TSPNP+VG VIV+ G+IVG G H KAG+PHAE+ AL AG
Sbjct: 2 KDDVFYMKLAIANAKAMKGQTSPNPLVGAVIVQQGEIVGMGAHMKAGEPHAEIHALHMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E AEGA YV+LEPC+H+G+T PCTEA+IK+ VK+VV+ DPNP+V KG+ L+ AGI
Sbjct: 62 EKAEGAHLYVTLEPCSHHGKTGPCTEAIIKSGVKRVVIATQDPNPLVAGKGITVLKQAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V G+ + RLN F H I + P+ L+ +S++G + E E+
Sbjct: 122 EVDEGICKQEADRLNVPFFHFIQSDLPYVILKSAISLDGKIATAQLESKWITGTEARQEV 181
Query: 251 SQLLQEYDAIILSASS-TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
QL QE DA+I + + + ++ A+QP R+I S P+ L++ + +
Sbjct: 182 QQLRQEADAVITGVETIIQDDAGLIVKDSIASQPIRVILDSTLRIPLHAKCLTDRRAETI 241
Query: 310 I----VFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
I ++ + + G T + ++ VL SVLV+ GN
Sbjct: 242 ICTSHMYDQKKYEQLIEKGHHVYVTSGEQRTDIHDVLRMLKERSVMSVLVEAGGNVS--- 298
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQSIV 422
+E +L+ + V+ + P+ G G T G + + + ++P S+V
Sbjct: 299 ---ASFLEASLVNEAVIYMAPLLIG--GKQAPTFFEGAGVKKLKEAIRPADVEYSMV 350
>gi|405374645|ref|ZP_11029024.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Chondromyces
apiculatus DSM 436]
gi|397086810|gb|EJJ17899.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Myxococcus
sp. (contaminant ex DSM 436)]
Length = 387
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 36/314 (11%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
F+MR +E A K +G TSPNP+VG V+VK G+I+ G+H KAG HAEV AL AG A+
Sbjct: 30 FFMRIALEEAAKGLGRTSPNPVVGAVLVKGGRIIARGYHKKAGTAHAEVVALEAAGARAK 89
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GA Y +LEPC+HYGRTPPC+ A+I+A V++V+ DPNP V+ KG+ R+R AG+ V
Sbjct: 90 GADLYTTLEPCDHYGRTPPCSMAIIEAGVRRVICASADPNPKVSGKGVARMRRAGLKVLT 149
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLL 254
GV E RLN F I TG P+ +L+ ++++G + G+ +G + +L
Sbjct: 150 GVLTEEADRLNRPFFKMIRTGLPWVSLKAAVTLDGKLATATGDSRWVTGPPARAWVHRLR 209
Query: 255 QEYDAIILSASSTKK------YSIPASQEPDANQPFRIITVSNHASPIRI-PG---LSEE 304
D I++ A++ +K +P D P R++ V +H +R+ PG ++
Sbjct: 210 DSVDVILVGANTVRKDDPKLTTRLPGGGGKD---PLRVV-VDSH---LRLSPGYTVFTQR 262
Query: 305 SSSKVIVFT--DGEITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVD-- 356
S+++ +V T D E +G++ + Q++LKA+L G V+V+
Sbjct: 263 SAARTVVATLEDPEGRKARRFLAQGVDVWQMRQKSGQVDLKALLRRLAKEGLNHVMVEGG 322
Query: 357 -------LRGNYGD 363
LRG+ D
Sbjct: 323 AEMYASFLRGHLAD 336
>gi|449052980|ref|ZP_21732399.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae hvKP1]
gi|448875765|gb|EMB10772.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Klebsiella pneumoniae hvKP1]
Length = 367
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 142/239 (59%), Gaps = 19/239 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
D YM R ++LA + +T PNP VGCVIVKDG+IVGEG H +AG+PHAEV ALR AGE
Sbjct: 2 QDEMYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGVHYRAGEPHAEVHALRMAGE 61
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+
Sbjct: 62 KARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIE 121
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQ 252
V+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 122 VSHGLMMNEAEALNKGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPQARRDVQ 181
Query: 253 LLQEYDAIILSASSTKKYSIPA----SQE---------PDAN--QPFRIITVS-NHASP 295
L+ IL++S+T PA QE P+ N QP R++ S N +P
Sbjct: 182 RLRAQSHAILTSSATVLADDPALTVRWQELSADTQALYPEENLRQPLRVVIDSQNRVTP 240
>gi|325266968|ref|ZP_08133639.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC
33394]
gi|324981709|gb|EGC17350.1| riboflavin biosynthesis protein RibD [Kingella denitrificans ATCC
33394]
Length = 369
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 132/225 (58%), Gaps = 6/225 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MRR +ELA STSPNP VGCVI G+IVG+GFH +AG PHAEV ALR AG+L
Sbjct: 12 DAAHMRRAIELAWLGRFSTSPNPRVGCVIAHGGQIVGQGFHVQAGFPHAEVHALRQAGDL 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC E LI A V +VV+ M DPNP+V KG+ L+ AGI V
Sbjct: 72 ARGATAYVTLEPCSHHGRTPPCAEGLIAAGVARVVIAMGDPNPLVAGKGIALLQAAGISV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + + LN F+ RI +PF +L+ S++G G +G +Q
Sbjct: 132 QCGLLADEARALNRGFLSRIERRRPFVSLKIAASLDGKTGLSDGRSQWITGEEARADVQR 191
Query: 257 YDA---IILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASP 295
A +L+ T + P Q P QP R+I S +P
Sbjct: 192 QRAQSCAVLTGVGTVLHDNPRLNVRQFPIVRQPLRVILDSRLRTP 236
>gi|256004715|ref|ZP_05429691.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM
2360]
gi|281416820|ref|ZP_06247840.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum
JW20]
gi|385779454|ref|YP_005688619.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM
1313]
gi|419721852|ref|ZP_14249006.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum AD2]
gi|419725596|ref|ZP_14252636.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum YS]
gi|255991308|gb|EEU01414.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM
2360]
gi|281408222|gb|EFB38480.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum
JW20]
gi|316941134|gb|ADU75168.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum DSM
1313]
gi|380770982|gb|EIC04862.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum YS]
gi|380782111|gb|EIC11755.1| riboflavin biosynthesis protein RibD [Clostridium thermocellum AD2]
Length = 368
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 198/367 (53%), Gaps = 26/367 (7%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
F+M R ++LA G T+PNP+VG V+VKDGKI+ EG+H + G PHAEV A +A E
Sbjct: 9 FFMSRAIKLAKLGWGKTNPNPLVGAVVVKDGKIIAEGYHKQLGGPHAEVEAFNNAKEDVA 68
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
G T YV+LEPC+HYGRTPPC + +I +KKVV + DPNP V+ +G E L++AGI+V V
Sbjct: 69 GGTLYVNLEPCSHYGRTPPCAQKIIDVGIKKVVAAIKDPNPKVSGRGFEMLKNAGIEVEV 128
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQ 255
GV +E RLNE FI IV KPF L+ ++++G + G+ E + +++
Sbjct: 129 GVLEEEAIRLNEIFITYIVKKKPFVILKTAMTLDGKIATASGDSKWVTGEKARNHVHVIR 188
Query: 256 EYDAIILSASSTKKYSIP--ASQEPD--ANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
+ A ++ +T P ++ PD + P RI+ S + P+ ++ S + VI+
Sbjct: 189 DRVAAVMVGINTVLKDNPYLTTRLPDKEGSDPVRIVVDSKGSIPLDSNVINSNSKAGVIL 248
Query: 312 FTDGEITVEPD--MGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
T I E + + KG++ + +++LK ++D Y SVL++ G
Sbjct: 249 ATTSRIDKEKEKMLIDKGVKIIKADGSDGRVDLKLLMDELYKLEIDSVLLEGGGT----- 303
Query: 366 MLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLG-----KRLILKNLQPKMSSQS 420
L I ++ K++ + P G G N T + +G + + +KN+ +
Sbjct: 304 -LNSSAISAGIVDKVMCFISPKIVG--GENAPTSVEGIGALRMCEAIGVKNISVVKFGED 360
Query: 421 IVLEGYL 427
I+LEGY+
Sbjct: 361 ILLEGYI 367
>gi|90410896|ref|ZP_01218910.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
profundum 3TCK]
gi|90328109|gb|EAS44420.1| Putative pyrimidine deaminase/pyrimidine reductase [Photobacterium
profundum 3TCK]
Length = 371
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R +ELA + +T+PNP VGCVI + IVGEGFH +AGQPHAEVFALR AGE
Sbjct: 6 DHSMMLRAIELAKRGRFTTAPNPNVGCVIAQGSTIVGEGFHYQAGQPHAEVFALRAAGEQ 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M+DPNP V +G+E L+ AGI+V
Sbjct: 66 TKGATAYVTLEPCSHFGRTPPCAQALINANVSRVVCAMVDPNPKVGGRGIEMLQIAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + LN FI R+ TG P+ L+ S++G G+ +G +Q
Sbjct: 126 QTGLLAADAQALNPGFIKRMKTGLPYVQLKLAASLDGRTALSNGDSKWITGPEARADVQR 185
Query: 257 YDA---IILSASST 267
+ A ILS SST
Sbjct: 186 FRARAGAILSTSST 199
>gi|422019672|ref|ZP_16366215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia alcalifaciens Dmel2]
gi|414102778|gb|EKT64368.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Providencia alcalifaciens Dmel2]
Length = 371
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R ELA + +TSPNP VGCVIV+DG+IVGEG+H KAG+PHAEV+ALR AG
Sbjct: 3 EQDRIYMARAFELAKEGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVYALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A+GATAYV+LEPC+H+GRTPPC EALI A + +VV M DPNP V +GL L AGI
Sbjct: 63 DKAKGATAYVTLEPCSHHGRTPPCAEALINAGISRVVAAMQDPNPQVAGRGLYMLNQAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ + E + LN F+ R+ T P+ L+ S++G GE + +
Sbjct: 123 ETASNILLEEAEALNRGFLKRMRTAFPYIQLKLAASLDGKTALANGESKWITSPAARKDV 182
Query: 252 QLLQEYDAIILSASSTKKYSIPA 274
Q+L+ + ILS S+T PA
Sbjct: 183 QVLRAQASAILSTSNTVIADDPA 205
>gi|354582600|ref|ZP_09001501.1| riboflavin biosynthesis protein RibD [Paenibacillus lactis 154]
gi|353198892|gb|EHB64358.1| riboflavin biosynthesis protein RibD [Paenibacillus lactis 154]
Length = 367
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 175/318 (55%), Gaps = 12/318 (3%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D FYM +++A +A G T NP+VGCV+VKDG + G G H + G PHAEV AL AG
Sbjct: 5 NDEFYMSLALDMAERAQGQTGINPVVGCVVVKDGALAGVGAHLERGTPHAEVHALNMAGS 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A G+T YV+LEPC+HYG TPPC+E LI VK+VVV DPNP+V +GL+ LR AGI+
Sbjct: 65 KAAGSTVYVTLEPCSHYGATPPCSERLIAEGVKRVVVACQDPNPLVAGRGLQMLRAAGIE 124
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQL-- 253
VT GV +E RLNEAF I TG PF TL+ +++G + + G+ S +L
Sbjct: 125 VTTGVLEERAVRLNEAFNKFITTGLPFVTLKTASTLDGKIASKTGDSKWISNEVSRELVH 184
Query: 254 -LQEYDAIILSASST---KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
L+ I++ +T S+ + QP RII S P+ +S+ ++ V
Sbjct: 185 TLRHRHQGIMAGVATVIADDPSLTTRLRVEGLQPVRIIVDSQLRIPLNCRVVSDGAAKTV 244
Query: 310 IVFTD-GEITVEPDMGTKGIETVNLH---QLNLKAVLDYCYSHGFCSVLVDLRGNYGD-- 363
++ T+ + + +G++ + +++L+A L G S+LV+ G
Sbjct: 245 VLATELADKAKRTALEERGVQILVCGPGPRVDLQAALMELGRMGIASILVEGGGTLSGSL 304
Query: 364 LEMLLKEGIEQNLLQKIV 381
LE L + I Q + KI+
Sbjct: 305 LENKLVDRIIQFIAPKII 322
>gi|323144123|ref|ZP_08078762.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
12066]
gi|322416100|gb|EFY06795.1| riboflavin biosynthesis protein RibD [Succinatimonas hippei YIT
12066]
Length = 366
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 165/302 (54%), Gaps = 40/302 (13%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+R ++LA + +TSPNP VGCVIV++G I+GEG+H KAG+PHAE+ A+R AG GA
Sbjct: 1 MKRALKLAARGKFTTSPNPAVGCVIVRNGMIIGEGYHHKAGEPHAEIMAMRSAGSSVAGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+HYGRTPPC +AL+KA VK+VV+ DPNP V +G++ L+DAGI+V VG+
Sbjct: 61 TCYVTLEPCSHYGRTPPCAKALVKAGVKRVVIACGDPNPQVAGRGVKILKDAGIEVDVGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEY--- 257
+ +LN AF IV P+ T++ +S++ + G + Q +Q+
Sbjct: 121 YENKALKLNRAFFKSIVKNIPYVTVKIGMSLDAKIALSDGRSKWITSEKSRQTVQKMRAA 180
Query: 258 -DAII-------------------LSASSTKKYSIPASQEPDANQPFRIITVSNHASPIR 297
DAII LSA +KY I + QP R++ S R
Sbjct: 181 SDAIITGSGTVIADNPLLNVRYDELSAKVFEKYDINKEK-----QPLRVVLDSRQ----R 231
Query: 298 IPGLSEESSSKVIVFTDGEI-TVEPDMGTKGI-ETVNLHQLNLKAVLDYCYSHGFCSVLV 355
I + ++F+ G++ V P + +K I E +N H A D+ +VL
Sbjct: 232 I------NPDDYVMFSQGKVLLVRPSLDSKNISEQINEHLEIFYAPCDFAGRICISAVLS 285
Query: 356 DL 357
+L
Sbjct: 286 EL 287
>gi|398994114|ref|ZP_10697036.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM21]
gi|398133173|gb|EJM22401.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM21]
Length = 377
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCVIV+DG++VGEG+H + G+PHAEV ALR AGE
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVIVRDGQVVGEGWHVRTGEPHAEVHALRAAGEQ 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+G TPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGHTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|220934731|ref|YP_002513630.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219996041|gb|ACL72643.1| riboflavin biosynthesis protein RibD [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 369
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/226 (42%), Positives = 131/226 (57%), Gaps = 13/226 (5%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +M R ++LA + + +T PNP VGCV+V+DG+++GEGFH +AG+PHAE+ ALR AG
Sbjct: 4 ETDTRHMARALQLARRGLYTTDPNPRVGCVMVRDGQVLGEGFHVRAGEPHAEILALRQAG 63
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A GAT YV+LEPC H+GRTPPC +ALI A V +VV M+DPNP V +GL RL AGI
Sbjct: 64 EAARGATVYVTLEPCAHFGRTPPCADALIHAGVARVVAAMVDPNPRVAGQGLARLTAAGI 123
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
GV + + LN FI R+ G+P+ ++ +S++G GE E+
Sbjct: 124 TTASGVLEAEARALNPGFISRMEQGRPYVRVKLAMSLDGRTAMASGESRWITGEAARRDV 183
Query: 252 QLLQEYDAIILSASSTKKYSIPASQ----------EPDANQPFRII 287
Q L+ IL+ S T P E QP R++
Sbjct: 184 QRLRARAGAILTGSGTVLADNPGLDVRLSAQELGIEGPVRQPLRVV 229
>gi|88809077|ref|ZP_01124586.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 7805]
gi|88787019|gb|EAR18177.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 7805]
Length = 372
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 141/224 (62%), Gaps = 6/224 (2%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVK-DGKIVGEGFHPKAGQPHAEVF 128
V + D+ +MRR +ELA A G TSPNP+VG V++ G +VGEGFH +AG+PHAEV
Sbjct: 4 VADADQRWIPWMRRALELAALADGYTSPNPLVGAVVLDPSGTLVGEGFHARAGEPHAEVG 63
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
AL AG+ A G T V+LEPC H+GRTPPCT+ALIKA + +VVV + DP+P V GL+R
Sbjct: 64 ALAQAGDAARGGTIIVTLEPCCHHGRTPPCTDALIKAGIARVVVALTDPDPRVAGGGLQR 123
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG 248
LRDAG++V GV + + N AF+HR+ TG+P+ L++ +S++G G SG
Sbjct: 124 LRDAGVEVISGVLEAEAAQQNYAFVHRVRTGRPWGLLKWAMSLDGRTALPNGASQWISGS 183
Query: 249 ----YYSQLLQEYDAIILSASSTKKYS-IPASQEPDANQPFRII 287
+ +L + DA+I+ + + + S+ + +P R++
Sbjct: 184 TARTWVHRLRAQCDAVIVGGGTVRADDPLLTSRGLRSPEPLRVV 227
>gi|442608547|ref|ZP_21023294.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441749943|emb|CCQ09356.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 371
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 135/226 (59%), Gaps = 14/226 (6%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +M+ +ELA + +T+PNP VGCV+VKDGKIVG+GFH +AG PHAEV ALR AG
Sbjct: 6 QQDEQFMQMAIELAKQGQFTTTPNPNVGCVLVKDGKIVGQGFHIQAGGPHAEVHALRQAG 65
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A+GATAYV+LEPC+H+GRTPPC + LI+A V KV+ M+DPNP V+ KGL L AGI
Sbjct: 66 DAAKGATAYVTLEPCSHFGRTPPCAKGLIEAGVAKVIAAMVDPNPKVSGKGLAMLEQAGI 125
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
++ G+ + +LNE F R+ G PF + S++G GE + +
Sbjct: 126 EIAFGLLESQAYQLNEGFFKRMKVGLPFVQCKLAASLDGKTALASGESKWITSPAARDDV 185
Query: 255 QEYDA---IILSASST----------KKYSIPASQEPDANQPFRII 287
Q + A I+S + T + + P QE QP R+I
Sbjct: 186 QRFRAKSCAIISGADTVLTDNAQLTVRAHFYPEQQE-QIRQPVRVI 230
>gi|340361225|ref|ZP_08683658.1| riboflavin biosynthesis protein RibD [Neisseria macacae ATCC 33926]
gi|339888853|gb|EGQ78278.1| riboflavin biosynthesis protein RibD [Neisseria macacae ATCC 33926]
Length = 365
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 166/327 (50%), Gaps = 22/327 (6%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M+ + LA STSPNP VGCVI +IVG+GFH KAG+PHAEV ALR A
Sbjct: 3 DCIDAQMMQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA 62
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE+A GATAYV+LEPC+HYGRTPPC EALI + V +VV M DPNP+V KGL L AG
Sbjct: 63 GEMARGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEAAG 122
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-----VAESGG 248
I G+ + + LN F+ RI G+PF ++ S++G L +G E+
Sbjct: 123 IRTESGLLETEVRELNRGFLSRIERGRPFVRIKCAASLDGKT--ALADGRSYWITGEAAR 180
Query: 249 YYSQLLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
Q L+ +L+ T P P QP RI+ S +P+ +S++
Sbjct: 181 ADVQTLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQPARIVLDSKLQTPLNSHMVSDDL 240
Query: 306 SSKVIVF-TDGEITVEPDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLVDLRG 359
S VIV D E ++P I + + ++L A+L G+ ++V+
Sbjct: 241 SPTVIVTDVDDEERLKPYRAFSHIRILRSSENAAGRIDLAALLPQLAELGYGEIMVEAGA 300
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP 386
L IE L +IV+ P
Sbjct: 301 T------LTSAFIESGLADEIVLYQAP 321
>gi|388466787|ref|ZP_10140997.1| riboflavin biosynthesis protein RibD [Pseudomonas synxantha BG33R]
gi|388010367|gb|EIK71554.1| riboflavin biosynthesis protein RibD [Pseudomonas synxantha BG33R]
Length = 375
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG+IVGEG+H + G+PHAE ALR AGE
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGEK 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRTPPC +AL+ A V +VV GM DPNP V +G++RL AGI+V
Sbjct: 69 ARGATVYVTLEPCSHHGRTPPCADALVSAGVVRVVAGMQDPNPEVAGRGMQRLAQAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 129 RSGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 188
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 189 LRAEASVVLTGADT 202
>gi|226329108|ref|ZP_03804626.1| hypothetical protein PROPEN_03011 [Proteus penneri ATCC 35198]
gi|225202294|gb|EEG84648.1| riboflavin biosynthesis protein RibD [Proteus penneri ATCC 35198]
Length = 384
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMRR +ELA +TSPNP VGCVIVK+G+IVGEG+H AG PHAEV AL+ AG+
Sbjct: 17 DEHYMRRAIELAALGRFTTSPNPNVGCVIVKEGEIVGEGYHHHAGGPHAEVNALKMAGDK 76
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+G+TPPC +ALI A VK+VV M DPNP V +GL +L AGIDV
Sbjct: 77 AKGATAYVTLEPCSHFGKTPPCADALINAGVKRVVAAMQDPNPQVAGRGLHKLLSAGIDV 136
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ + ++LN F R+ TG P+ L+ S++G GE + + +Q
Sbjct: 137 SHGILMQEAEKLNVGFFKRMRTGFPYIQLKLGASLDGKTALASGESQWITSKASRRDVQN 196
Query: 257 YDA---IILSASST 267
+ A IL+ S+T
Sbjct: 197 FRAQASAILTTSAT 210
>gi|170760325|ref|YP_001788192.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str.
Loch Maree]
gi|169407314|gb|ACA55725.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A3 str.
Loch Maree]
Length = 365
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 193/372 (51%), Gaps = 28/372 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++VK+ KI+GEG+H G PHAEV+ALR+A
Sbjct: 2 EDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAS 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT Y++LEPC+HYG+TPPC E ++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATMYITLEPCSHYGKTPPCAEYIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
+V + ++ K+LNE FI I KPF L+ +++G + + GE E+
Sbjct: 122 EVVTEIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATRTGESKWITGEEARHKV 181
Query: 251 SQLLQEYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
Q+ + I++ + K + ++ P II SN P+ L S +
Sbjct: 182 QQIRNDLSGIMVGIDTVIKDDPLLTTRIEGGRSPKAIIVDSNLRIPLESKILETLSKRAI 241
Query: 310 IVFTD------GEITVEPDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ T + ++G K +E + + L ++ Y S G S+L L G
Sbjct: 242 YIATTKKHKNPSKKNALENLGAKVLEFEENQEGKVPLNKLMQYLGSEGVDSIL--LEGGS 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKNLQPK 415
LKEGI + KI+ + P + G D GG T + SL L+NL+ +
Sbjct: 300 TLNFSALKEGI----VDKIMCFIAPKIMGGQDSKTMIGG---TGIESLKDIFNLQNLKFE 352
Query: 416 MSSQSIVLEGYL 427
Q I++EGY+
Sbjct: 353 KIGQDILIEGYV 364
>gi|345298090|ref|YP_004827448.1| riboflavin biosynthesis protein RibD [Enterobacter asburiae LF7a]
gi|345092027|gb|AEN63663.1| riboflavin biosynthesis protein RibD [Enterobacter asburiae LF7a]
Length = 367
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + +N+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMHDAEVINKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S T PA
Sbjct: 183 LRAQSHAILTSSETVLADDPA 203
>gi|238755138|ref|ZP_04616485.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
ATCC 29473]
gi|238706698|gb|EEP99068.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Yersinia ruckeri
ATCC 29473]
Length = 369
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 144/247 (58%), Gaps = 23/247 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ELA +TSPNP VGCVIV+DGKIVGEG+H +AG+PHAEV ALR AG+
Sbjct: 4 DEIYMARAFELARLGRFTTSPNPNVGCVIVRDGKIVGEGYHLRAGEPHAEVHALRMAGDA 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A +++VV M DPNP V +GL +L+ AGI V
Sbjct: 64 ARGATAYVTLEPCSHHGRTPPCADALVAAGIRRVVTAMQDPNPQVAGRGLYQLKQAGITV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 EHGLMLAEAEAVNLGFLKRMRTGFPYLQLKMATSLDGRTAMASGESKWITSPQARQDVQR 183
Query: 257 YDA---IILSASSTKKYSIPA----SQEPDAN-----------QPFRIITVS-NHASP-- 295
+ A ILS S+T P+ E DA+ QP RII S N +P
Sbjct: 184 FRAQSSAILSTSATVLADDPSLIVRWTELDADTQRIYPELALRQPTRIILDSQNRVTPAH 243
Query: 296 --IRIPG 300
IR PG
Sbjct: 244 QVIRQPG 250
>gi|312963303|ref|ZP_07777786.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6]
gi|311282383|gb|EFQ60981.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens WH6]
Length = 378
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG+IVGEG+H + GQPHAEV ALR AG+
Sbjct: 12 DAHYMARALELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGQPHAEVHALRAAGDK 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYG TPPC +AL+ A + +VV M DPNP V +G++RL AGI+V
Sbjct: 72 ARGATAYVTLEPCSHYGHTPPCADALVSAGLARVVAAMQDPNPEVAGRGMQRLAQAGIEV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 132 RSGVLEGEARALNRGFLKRMEHGLPFVRVKMAMSLDGRTAMASGESQWITGPAARAAVQR 191
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 192 LRAEASVVLTGADT 205
>gi|284006397|emb|CBA71633.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Arsenophonus nasoniae]
Length = 369
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 132/201 (65%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R + LA + +TSPNP VGCVIV+DG++VGEGFH K G+ HAE++AL+ AGE
Sbjct: 5 DKQFMSRALSLAKQGRFTTSPNPNVGCVIVRDGEVVGEGFHCKTGEAHAEIYALQMAGEK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYG+TPPC +ALI A +++VVV M DPNP V +GL +L+ AGI+V
Sbjct: 65 ANGATAYVTLEPCSHYGKTPPCADALISAGIQRVVVAMQDPNPQVAGRGLLKLQQAGIEV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + ++LN+ F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 125 IHGLLIDEAEQLNQGFLKRMRTGFPYVQLKLAASLDGRTALASGESKWITSPAARQDVQS 184
Query: 257 YDA---IILSASSTKKYSIPA 274
+ A IL+ S+T PA
Sbjct: 185 FRAQASAILTTSATVLADNPA 205
>gi|407688366|ref|YP_006803539.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407291746|gb|AFT96058.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 379
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 177/326 (54%), Gaps = 24/326 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDA 133
K+D F+M + ++LA + +TSPNP VGCVIV ++ +++G+G+H +AG PHAEV ALR A
Sbjct: 7 KNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNQLLGQGYHIQAGTPHAEVHALRHA 66
Query: 134 GEL----AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
A+GATAYV+LEPC+H+GRTPPC AL++AKV +VV+ M DPNP V G+ L
Sbjct: 67 SNARPQGAKGATAYVTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGNGISIL 126
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
+DAGI+V V LN FI R++TGKPF ++ S++G + Q G +G
Sbjct: 127 QDAGIEVVSDVMAAEAAALNPGFIKRMLTGKPFVRVKLGTSLDGKIALQNGVSQWITGAE 186
Query: 250 YSQLLQEYDA---IILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+ +Q+Y A ++L+ S T + P+ + F + + P R+ S+
Sbjct: 187 ARRDVQQYRAQSCVVLTGSGTVQADNPSLLVREKEAQFENYPLDHIRQPARVVVDSKSKL 246
Query: 307 SK-VIVFTDGEIT------VEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
S+ +F DG IT PD T+ H L L H S L D +
Sbjct: 247 SRDYTLFNDGNITFTATSQAHPDTATQ-------HYLQLDEKDGKLNLHSLMSALGDKQ- 298
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVL 385
Y ++ + G+ LLQ+ +V+ L
Sbjct: 299 -YNEVWVEAGPGLAGALLQERLVDEL 323
>gi|291533443|emb|CBL06556.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Megamonas hypermegale ART12/1]
Length = 360
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 200/365 (54%), Gaps = 32/365 (8%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
MR ++LA A+G TSPNP+VG VIVKD ++VG G+H +AG PHAEV AL AGELA+GA
Sbjct: 1 MRLAMQLAGNAIGRTSPNPLVGAVIVKDNRVVGCGWHREAGTPHAEVHALNQAGELAQGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG- 199
YV+LEPC HYG+TPPC++AL++AKVK V G+LD NP V KG + L DAGI V G
Sbjct: 61 DVYVTLEPCAHYGKTPPCSKALVEAKVKNVYGGLLDVNPKVAGKGFKILEDAGIHVEYGF 120
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQLLQ 255
++DEL K+ NE F I KPF L+ ++++G + G+ S Y +L
Sbjct: 121 LQDELRKQ-NEVFFKWIEHKKPFIVLKAAMTLDGKIATATGQSKWITNETSRAYGYKLRD 179
Query: 256 EYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
YD I++ ++ + + + D + P RI+ S+ I ++++ S+K IV T
Sbjct: 180 IYDGIMVGINTVIEDNPMLTARVDGGKNPIRIVVDSSLKIDIN-ANVAQDKSAKTIVATT 238
Query: 315 GEITVEPDMGTKG-------IETVNLHQLNLKAVLDYCYSHGFCSVLVD----LRGNYGD 363
+ + + + ++ +++++ +LD CS+LV+ L G++
Sbjct: 239 DKADKDKILKLQAQDVDVIVVDKDENDKVDIEKLLDILGQQNICSILVEGGATLSGSF-- 296
Query: 364 LEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKMSSQS 420
+ + L+ K+ + P + G + P T + +L + L LK++Q + +
Sbjct: 297 --------VAKKLVDKVYFFIAPKIVGGKEAKTPVAGTGILNLQEALSLKDIQIEKLEED 348
Query: 421 IVLEG 425
I++ G
Sbjct: 349 ILIIG 353
>gi|310644100|ref|YP_003948858.1| riboflavin biosynthesis protein
(diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Paenibacillus polymyxa SC2]
gi|309249050|gb|ADO58617.1| Riboflavin biosynthesis protein
(Diaminohydroxyphosphoribosylaminopyrimidine deaminase
(Riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Paenibacillus polymyxa SC2]
gi|392304807|emb|CCI71170.1| riboflavin biosynthesis protein RibD [Paenibacillus polymyxa M1]
Length = 366
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 179/318 (56%), Gaps = 17/318 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMR +E A A G T PNP+VG VIV +G+IVG G H K G+PHAE+ ALR AGE A+G
Sbjct: 7 YMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMAGEHAQG 66
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+H+GRT PC EA++KA +++VV+ LDPNP+V+ +G++ L+DAGI+V VG
Sbjct: 67 ATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQILKDAGIEVIVG 126
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
V ++ R+NE F IV +PF T++ ++++G + + E +E+ L+
Sbjct: 127 VCEQESIRMNEVFNQYIVNKRPFITIKSAVTLDGKIATRTSESKWITSEAAREDVHRLRH 186
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI---- 310
IL T + P ++ P+ P RII S P+ +++ + I
Sbjct: 187 EHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSKLRIPLDARVITDGEAPTWIFTGR 246
Query: 311 VFTDGEITVEPDMGTKGIETVNLH--QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
+ G+ + +G K T + + ++NL +LD + SV V+ G E +
Sbjct: 247 TYDKGKRSQLEQLGVKVYPTQDEYSERVNLPQMLDILGAAEVSSVFVE-----GGAE-VN 300
Query: 369 KEGIEQNLLQKIVVEVLP 386
++Q L K+V+ + P
Sbjct: 301 ASFVQQGLADKLVLYIAP 318
>gi|55981033|ref|YP_144330.1| diaminohydroxyphosphoriboxylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase RibD [Thermus thermophilus HB8]
gi|55772446|dbj|BAD70887.1| diaminohydroxyphosphoriboxylaminopyrimidine deaminase +
5-amino-6-(5-phosphoribosylamino)uracil reductase (RibD)
[Thermus thermophilus HB8]
Length = 377
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 142/232 (61%), Gaps = 11/232 (4%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
D D+ F +RR ++LA +A G TSPNP+VG V+V++G+IVGEGFHP+AG+PHAEVFAL+
Sbjct: 2 RDLDERF-LRRALQLAERARGHTSPNPLVGAVLVREGRIVGEGFHPRAGEPHAEVFALQQ 60
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AGELA GATAYV+LEPC+H+GRTPPC+ AL++A V +VVV + NP+ GLERLR
Sbjct: 61 AGELARGATAYVTLEPCDHFGRTPPCSLALLQAGVSRVVVAAREENPVAKG-GLERLRAG 119
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY 249
G+ V G+ + + NE F G PF L+ L+++G V G+ +E+
Sbjct: 120 GVQVEAGLLEAEARAQNEVFFAVQKKGLPFVLLKAALTLDGKVAAPSGDARWISSEASRR 179
Query: 250 YSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP 299
+ +++ ++ T PA +EPD FR + P+R P
Sbjct: 180 VAHAYRQWLPAVMVGVGTVLKDDPALTVREPD----FRPFPLMVEPPPLRDP 227
>gi|401762510|ref|YP_006577517.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400174044|gb|AFP68893.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 367
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARAMKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + +N+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAEAINKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL++S T PA
Sbjct: 183 LRAQSHAILTSSETVLADDPA 203
>gi|260596783|ref|YP_003209354.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter turicensis z3032]
gi|260215960|emb|CBA28583.1| Riboflavin biosynthesis protein ribD [Cronobacter turicensis z3032]
Length = 367
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 116/165 (70%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA++ +T PNP VGCVIV DG IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEFYMARALKLASQGRFTTHPNPRVGCVIVNDGVIVGEGFHLRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AG++V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGVEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|449019530|dbj|BAM82932.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cyanidioschyzon merolae strain 10D]
Length = 524
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 199/421 (47%), Gaps = 81/421 (19%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVK--DGKIVGEGFHPKAGQPHAEVFAL---- 130
D YM RC++LA A SPNP VGCV+V G+IVGEGFHP+AG PHAE +AL
Sbjct: 101 DETYMDRCIQLALMA--RPSPNPPVGCVVVDPDTGRIVGEGFHPRAGYPHAEQYALQATF 158
Query: 131 ---RDAGE-------------------LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVK 168
R+A A G YV+LEPCNHYGRTPPCTE+LI+A+V
Sbjct: 159 TTLRNASSHQNQHLAATVSEPVAALPGSARGMHVYVTLEPCNHYGRTPPCTESLIQAQVS 218
Query: 169 KVVVGMLDPNPIVNSKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYT 228
+VV+G DP+P G ERLR AGI+V G C +L E F HRI P L+Y
Sbjct: 219 RVVIGTRDPDPRTAGSGAERLRRAGIEVQFGPRAAECLKLYEGFQHRIHHQTPLGILKYA 278
Query: 229 LSVNGHVLDQLGEG----VAESGGYYSQLLQEYDAIILSASSTKK----YSIPASQEPDA 280
+S++G + + G+ A S Y +L DA+++ A + ++ ++ + D
Sbjct: 279 MSLDGKIATETGDARWVSSATSRRYVHELRARCDAVVVGAGTVRRDDPALTVRLEESIDV 338
Query: 281 -----NQPFRIITVSNHASPIR------------------IPGLSEESSSKVIVFTDGEI 317
QP R++ ++ A R + E SSSK + + E
Sbjct: 339 PELGYGQPLRVVMCTSAARLWRDRPDAKLWDTSVAPTVLAVSSAGEVSSSKELDAAEREA 398
Query: 318 TVEPDMGTKGIETVNLHQL----NLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGIE 373
+ + ++G++ L L +A++ + Y +G +VL + G L +
Sbjct: 399 ILA--LRSRGVQIAYLDALLPLPPTRALMQWLYDYGCTTVLWECGGT------LATSAVR 450
Query: 374 QNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKR-------LILKNLQPKMSSQSIVLEGY 426
++ + KI+V V P G +P + LG R L L ++ S Q +++E Y
Sbjct: 451 ESAVHKILVFVAPKLVGGR-SSPTPIAADLGVRNMEEALALRLGRMEVIGSGQDVLIEAY 509
Query: 427 L 427
L
Sbjct: 510 L 510
>gi|375111196|ref|ZP_09757407.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella jeotgali KCTC 22429]
gi|374568738|gb|EHR39910.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella jeotgali KCTC 22429]
Length = 382
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 137/235 (58%), Gaps = 22/235 (9%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +MRR + LA + +T PNP VG ++VKDG+++GEGFH +AG PHAEVFAL+ AG
Sbjct: 5 QADHAFMRRALALAAQGRFTTDPNPNVGALVVKDGQVLGEGFHQQAGGPHAEVFALQQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
A GAT YV+LEPC HYGRTPPC EAL+KA V +VV+ MLDPNP+V KG+ L+ AGI
Sbjct: 65 SAARGATCYVTLEPCAHYGRTPPCAEALVKAGVARVVIAMLDPNPLVAGKGVAILQQAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
V G+ E + LN F+ R+ +P+ L+ S++G G+ +++
Sbjct: 125 SVAHGLLTEEARALNPGFLSRMERQRPYLYLKLAASLDGRTALANGQSQWLTSDAARADV 184
Query: 252 QLLQEYDAIILSASS---------TKKYSIPASQEPDA----------NQPFRII 287
QL + + ILS +S T + S A EP A QP R+I
Sbjct: 185 QLWRAQVSAILSTASTVLADAARLTVRQSSDAGAEPAALIRPLADGSLRQPLRVI 239
>gi|386360436|ref|YP_006058681.1| riboflavin biosynthesis protein RibD [Thermus thermophilus JL-18]
gi|383509463|gb|AFH38895.1| riboflavin biosynthesis protein RibD [Thermus thermophilus JL-18]
Length = 377
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 142/232 (61%), Gaps = 11/232 (4%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
D D+ F +RR ++LA +A G TSPNP+VG V+V++G+IVGEGFHP+AG+PHAEV ALR+
Sbjct: 2 RDLDERF-LRRALQLAERARGHTSPNPLVGAVLVREGRIVGEGFHPRAGEPHAEVLALRE 60
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AGELA GATAYV+LEPC+H+GRTPPC+ AL++A V +VVV + NP+ GLERLR
Sbjct: 61 AGELARGATAYVTLEPCDHFGRTPPCSLALLEAGVSRVVVAAREENPVAKG-GLERLRAG 119
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY 249
G+ V G+ + + NE F G PF L+ L+++G V G+ +E+
Sbjct: 120 GVQVEAGLLEAEARAQNEVFFAVQKKGLPFVLLKAALTLDGKVAAPSGDARWISSEASRR 179
Query: 250 YSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIP 299
+ +++ ++ T PA +EPD FR + P+R P
Sbjct: 180 VAHAYRQWLPAVMVGVGTVLKDDPALTVREPD----FRPFPLMVEPPPLRDP 227
>gi|337285949|ref|YP_004625422.1| riboflavin biosynthesis protein RibD [Thermodesulfatator indicus
DSM 15286]
gi|335358777|gb|AEH44458.1| riboflavin biosynthesis protein RibD [Thermodesulfatator indicus
DSM 15286]
Length = 369
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 193/371 (52%), Gaps = 34/371 (9%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D ++MR ++ K +G TSPNP VG V+VKDG+IVG+G+H AG PHAEV ALR+AGE
Sbjct: 4 DIYFMRIALKEGRKGLGRTSPNPPVGAVVVKDGQIVGKGYHRLAGTPHAEVHALREAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNHYG+TPPCT+A++KA +K+VV+G DPNP G + LR G++V
Sbjct: 64 ARGATIYVTLEPCNHYGKTPPCTQAILKAGIKRVVIGARDPNPKAQG-GADFLRVNGLEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
T G+ E C L F+ + +P+ + +S++G + + G+ E +
Sbjct: 123 TTGILAEECAELCRFFLKTVKERRPWIIAKAAMSLDGRIATRTGDSKWITGEKARRFGHR 182
Query: 254 LQEY-DAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI-RIPGLSEESSSKVI 310
L+ DAI++ ++ K + + P RII S + P+ R L++E+ + V
Sbjct: 183 LRHICDAILVGKNTVLKDDPLLTCRLKGGKNPVRIILDSKLSLPLDRQVFLNKEAQTVVA 242
Query: 311 VFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLV----DLRGNYG 362
+ E ++ G+ L Q++LKA+L ++ S+LV ++ G++
Sbjct: 243 CNNEAPRNKEKELKKLGVIVWRLPVENSQVDLKALLKRAFNQDILSILVEGGAEVHGSFF 302
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSD------GGNPHTLLNSLGKRLILKNLQPKM 416
D Q L+ +I PV G GG+ LL + L K
Sbjct: 303 D----------QGLVDEIAFFYGPVIIGGKSSPCAIGGDGPALLAQASR---LSKFSFKR 349
Query: 417 SSQSIVLEGYL 427
S+++ GYL
Sbjct: 350 LGDSLLVRGYL 360
>gi|22124907|ref|NP_668330.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis KIM10+]
gi|45440597|ref|NP_992136.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis biovar Microtus str. 91001]
gi|51595284|ref|YP_069475.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis IP 32953]
gi|108808668|ref|YP_652584.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Antiqua]
gi|108811070|ref|YP_646837.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Nepal516]
gi|145600077|ref|YP_001164153.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Pestoides F]
gi|149364971|ref|ZP_01887006.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis CA88-4125]
gi|162418167|ref|YP_001607523.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis Angola]
gi|165926574|ref|ZP_02222406.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165935961|ref|ZP_02224531.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011096|ref|ZP_02231994.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213091|ref|ZP_02239126.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167398606|ref|ZP_02304130.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421644|ref|ZP_02313397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167423702|ref|ZP_02315455.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167470057|ref|ZP_02334761.1| riboflavin biosynthesis protein RibD [Yersinia pestis FV-1]
gi|170025475|ref|YP_001721980.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis YPIII]
gi|186894301|ref|YP_001871413.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis PB1/+]
gi|218930213|ref|YP_002348088.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis CO92]
gi|229838788|ref|ZP_04458947.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896058|ref|ZP_04511228.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Pestoides A]
gi|229899356|ref|ZP_04514499.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. India
195]
gi|229901297|ref|ZP_04516419.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Nepal516]
gi|270489486|ref|ZP_06206560.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27]
gi|294504911|ref|YP_003568973.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [Yersinia pestis Z176003]
gi|384123381|ref|YP_005506001.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [Yersinia pestis D106004]
gi|384127233|ref|YP_005509847.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase oxidoreductase [Yersinia pestis D182038]
gi|384138974|ref|YP_005521676.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis A1122]
gi|420564585|ref|ZP_15060554.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-04]
gi|420569636|ref|ZP_15065139.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-05]
gi|420575290|ref|ZP_15070257.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-06]
gi|420580606|ref|ZP_15075089.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-07]
gi|420585960|ref|ZP_15079939.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-08]
gi|420591072|ref|ZP_15084536.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-09]
gi|420596456|ref|ZP_15089379.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-10]
gi|420602130|ref|ZP_15094427.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-11]
gi|420607554|ref|ZP_15099329.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-12]
gi|420612938|ref|ZP_15104160.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-13]
gi|420618323|ref|ZP_15108855.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-14]
gi|420623622|ref|ZP_15113628.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-15]
gi|420628695|ref|ZP_15118230.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-16]
gi|420633831|ref|ZP_15122831.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-19]
gi|420639027|ref|ZP_15127514.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-25]
gi|420644499|ref|ZP_15132502.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-29]
gi|420655424|ref|ZP_15142349.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-34]
gi|420660931|ref|ZP_15147279.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-36]
gi|420666218|ref|ZP_15152035.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-42]
gi|420671085|ref|ZP_15156471.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-45]
gi|420676432|ref|ZP_15161331.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-46]
gi|420682053|ref|ZP_15166410.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-47]
gi|420687388|ref|ZP_15171149.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-48]
gi|420698367|ref|ZP_15180801.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-53]
gi|420704194|ref|ZP_15185437.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-54]
gi|420709562|ref|ZP_15190197.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-55]
gi|420715020|ref|ZP_15195050.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-56]
gi|420720533|ref|ZP_15199779.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-58]
gi|420726007|ref|ZP_15204594.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-59]
gi|420731589|ref|ZP_15209611.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-60]
gi|420736611|ref|ZP_15214147.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-61]
gi|420742086|ref|ZP_15219067.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-63]
gi|420747806|ref|ZP_15223904.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-64]
gi|420753242|ref|ZP_15228756.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-65]
gi|420759025|ref|ZP_15233414.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-66]
gi|420764295|ref|ZP_15238036.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-71]
gi|420769520|ref|ZP_15242724.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-72]
gi|420774500|ref|ZP_15247234.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-76]
gi|420780117|ref|ZP_15252177.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-88]
gi|420785716|ref|ZP_15257071.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-89]
gi|420790859|ref|ZP_15261691.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-90]
gi|420796382|ref|ZP_15266656.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-91]
gi|420806795|ref|ZP_15276051.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-93]
gi|420817666|ref|ZP_15285844.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-95]
gi|420822981|ref|ZP_15290612.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-96]
gi|420828062|ref|ZP_15295179.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-98]
gi|420833749|ref|ZP_15300318.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-99]
gi|420838616|ref|ZP_15304714.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-100]
gi|420843807|ref|ZP_15309425.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-101]
gi|420849464|ref|ZP_15314507.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-102]
gi|420855134|ref|ZP_15319309.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-103]
gi|420860324|ref|ZP_15323879.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-113]
gi|421764686|ref|ZP_16201474.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis INS]
gi|21957743|gb|AAM84581.1|AE013703_11 bifunctional pyrimidine deaminase/reductase [Yersinia pestis
KIM10+]
gi|45435454|gb|AAS61013.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis biovar Microtus str. 91001]
gi|51588566|emb|CAH20174.1| bifunctional pyrimidine deaminase/reductase in pathway of
riboflavin synthesis [Yersinia pseudotuberculosis IP
32953]
gi|108774718|gb|ABG17237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Yersinia pestis Nepal516]
gi|108780581|gb|ABG14639.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis Antiqua]
gi|115348824|emb|CAL21778.1| riboflavin biosynthesis protein RibD [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis CO92]
gi|145211773|gb|ABP41180.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Yersinia pestis Pestoides F]
gi|149291384|gb|EDM41458.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis CA88-4125]
gi|162350982|gb|ABX84930.1| riboflavin biosynthesis protein RibD [Yersinia pestis Angola]
gi|165916106|gb|EDR34713.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921502|gb|EDR38699.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990096|gb|EDR42397.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205878|gb|EDR50358.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166960563|gb|EDR56584.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051110|gb|EDR62518.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057872|gb|EDR67618.1| riboflavin biosynthesis protein RibD [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169752009|gb|ACA69527.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
YPIII]
gi|186697327|gb|ACC87956.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
PB1/+]
gi|229681226|gb|EEO77320.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Nepal516]
gi|229687758|gb|EEO79831.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. India
195]
gi|229695154|gb|EEO85201.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700981|gb|EEO89010.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Yersinia pestis Pestoides A]
gi|262362977|gb|ACY59698.1| riboflavin biosynthesis protein RibD (includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Yersinia pestis D106004]
gi|262366897|gb|ACY63454.1| riboflavin biosynthesis protein RibD (includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Yersinia pestis D182038]
gi|270337990|gb|EFA48767.1| riboflavin biosynthesis protein RibD [Yersinia pestis KIM D27]
gi|294355370|gb|ADE65711.1| riboflavin biosynthesis protein RibD (includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Yersinia pestis Z176003]
gi|342854103|gb|AEL72656.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis A1122]
gi|391438360|gb|EIQ99115.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-04]
gi|391439489|gb|EIR00139.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-05]
gi|391443287|gb|EIR03615.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-06]
gi|391455296|gb|EIR14425.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-07]
gi|391456163|gb|EIR15215.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-08]
gi|391458084|gb|EIR16973.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-09]
gi|391471088|gb|EIR28679.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-10]
gi|391472496|gb|EIR29952.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-11]
gi|391473456|gb|EIR30834.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-12]
gi|391487239|gb|EIR43196.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-13]
gi|391488714|gb|EIR44529.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-15]
gi|391489061|gb|EIR44843.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-14]
gi|391503123|gb|EIR57343.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-16]
gi|391503345|gb|EIR57549.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-19]
gi|391508558|gb|EIR62281.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-25]
gi|391519125|gb|EIR71782.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-29]
gi|391520792|gb|EIR73316.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-34]
gi|391533687|gb|EIR84941.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-36]
gi|391536685|gb|EIR87646.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-42]
gi|391539098|gb|EIR89844.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-45]
gi|391552078|gb|EIS01532.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-46]
gi|391552358|gb|EIS01789.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-47]
gi|391552801|gb|EIS02192.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-48]
gi|391568125|gb|EIS15893.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-53]
gi|391572798|gb|EIS19978.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-54]
gi|391581399|gb|EIS27289.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-55]
gi|391583628|gb|EIS29266.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-56]
gi|391594079|gb|EIS38282.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-58]
gi|391597041|gb|EIS40899.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-60]
gi|391598238|gb|EIS41982.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-59]
gi|391611494|gb|EIS53665.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-61]
gi|391612033|gb|EIS54149.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-63]
gi|391614974|gb|EIS56789.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-64]
gi|391624624|gb|EIS65234.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-65]
gi|391629344|gb|EIS69290.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-66]
gi|391635350|gb|EIS74523.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-71]
gi|391637381|gb|EIS76308.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-72]
gi|391647340|gb|EIS84977.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-76]
gi|391650939|gb|EIS88172.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-88]
gi|391655462|gb|EIS92203.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-89]
gi|391660249|gb|EIS96428.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-90]
gi|391667840|gb|EIT03125.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-91]
gi|391677328|gb|EIT11641.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-93]
gi|391691276|gb|EIT24216.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-95]
gi|391694241|gb|EIT26920.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-96]
gi|391695928|gb|EIT28462.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-98]
gi|391708077|gb|EIT39363.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-99]
gi|391711525|gb|EIT42482.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-100]
gi|391712396|gb|EIT43281.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-101]
gi|391724239|gb|EIT53835.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-102]
gi|391724981|gb|EIT54494.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-103]
gi|391727589|gb|EIT56783.1| riboflavin biosynthesis protein RibD [Yersinia pestis PY-113]
gi|411174237|gb|EKS44270.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pestis INS]
Length = 369
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA +TSPNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC +AL+ A V +VV M DPNP V +GL +L+ AGI V
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 DHGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 YDA---IILSASST 267
+ A ILS S+T
Sbjct: 184 FRAESSAILSTSAT 197
>gi|153947163|ref|YP_001402077.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Yersinia pseudotuberculosis IP 31758]
gi|152958658|gb|ABS46119.1| riboflavin biosynthesis protein RibD [Yersinia pseudotuberculosis
IP 31758]
Length = 369
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ELA +TSPNP VGCV+V+DG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 4 DEFYMARAFELARLGRFTTSPNPNVGCVLVRDGEIVGEGYHLRAGEPHAEVHALRMAGEK 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC +AL+ A V +VV M DPNP V +GL +L+ AGI V
Sbjct: 64 ARGATAYVTLEPCSHYGRTPPCADALVAAGVIRVVAAMQDPNPEVAGRGLYKLKQAGIAV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + +N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 124 DHGLMLAEAEAVNLGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQR 183
Query: 257 YDA---IILSASST 267
+ A ILS S+T
Sbjct: 184 FRAESSAILSTSAT 197
>gi|429089327|ref|ZP_19152059.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter universalis NCTC 9529]
gi|426509130|emb|CCK17171.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter universalis NCTC 9529]
Length = 367
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 116/165 (70%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA + +T PNP VGCVIVK+G IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|387895873|ref|YP_006326170.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens A506]
gi|387164145|gb|AFJ59344.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens A506]
Length = 375
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG+IVGEG+H + G+PHAE ALR AG+
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGDK 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRTPPC +AL+ A V +VV GM DPNP V +G++RL AGI+V
Sbjct: 69 ARGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 129 RSGVLETEARALNPGFLKRMERGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 188
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 189 LRAEASVVLTGADT 202
>gi|187930956|ref|YP_001890940.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187711865|gb|ACD30162.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 355
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 177/324 (54%), Gaps = 20/324 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL A +
Sbjct: 5 DKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGEAHAEVHALTKAVDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H GRTPPCT+ +IKA +KKV++ LDPNP V KG+ERL++AGI V
Sbjct: 65 AKGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G + G+ ++ + + +
Sbjct: 125 EVGLLEKQAQELNKIFFHYQTTKKPFVYAKWAMSLDGKIAVNDGDSKKISSHQAFVNTHE 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPI--RIPGLSEESSS 307
L DAI++ + + + N+ P R I ++NH + I L + +
Sbjct: 185 LRNICDAILIGKQTLIDDNPSLDVRININKIKHPTRFI-LANHLTTINHNWQVLDQRHAK 243
Query: 308 KVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
+ V + V + GIE L HQ+ L +L+ G S+LV+ GN
Sbjct: 244 TIFVCSKISARVATKLNQLGIEYWLLPQSQHQVCLDTLLEKMGKIGITSLLVE-GGN--- 299
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPV 387
L I Q L+ + + PV
Sbjct: 300 --KTLNSFINQKLVNEFYTYLAPV 321
>gi|270308361|ref|YP_003330419.1| riboflavin biosynthesis protein,
5-amino-6-(5-phosphoribosylamino)uracil reductase,
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. VS]
gi|270154253|gb|ACZ62091.1| riboflavin biosynthesis protein,
5-amino-6-(5-phosphoribosylamino)uracil reductase,
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Dehalococcoides sp. VS]
Length = 365
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 198/370 (53%), Gaps = 32/370 (8%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM + + LA A+G SPNP VG VIVK+G++VG+GF G HAE+ AL+ A E A+G
Sbjct: 3 YMSQALSLAKLAIGQVSPNPSVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEKAKG 62
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A YV+LEPC H GRTPPCT ++I++ +K+V + LD NP+V+ KG + L +AGI V +G
Sbjct: 63 AALYVTLEPCCHQGRTPPCTGSIIESGIKEVYIATLDDNPLVSGKGKKELENAGIKVHLG 122
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
+ + +++NEA+ I TG PF T +Y +S++G + G+ E +++ ++
Sbjct: 123 MMEREARQMNEAYFKHITTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYIRH 182
Query: 257 YDAIILSASSTKKYSIP--------ASQEPDANQPFRIITVSNHASPI-----RIPGLSE 303
+I++ +T P +QP R+I N +P+ +PG +
Sbjct: 183 ISDVIMAGLNTILKDDPHLTARVNCGRGGTSHSQPTRVIIDDNGRAPLSSNVFHVPGNTI 242
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQL-NLKAVLDYCYSHGFCSVLVDLRGNYG 362
+ +K + + + E +G K +E + L +LKA+L Y +G SVLV+ G
Sbjct: 243 VAVAKGLTLEEKQAYDE--VGAKVVELPDERGLVDLKALLRYLGQNGVTSVLVEGGG--- 297
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMS 417
++L + L+ K++V V P+ G G + + LG LI L+++
Sbjct: 298 ---IVLGSLFDLKLVDKVLVFVAPIIIG--GKDAKIPVAGLGAELITDSAKLRDITTTAF 352
Query: 418 SQSIVLEGYL 427
Q +++ GY+
Sbjct: 353 GQDVLISGYV 362
>gi|57234067|ref|YP_181903.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
195]
gi|57224515|gb|AAW39572.1| riboflavin biosynthesis protein RibD [Dehalococcoides ethenogenes
195]
Length = 365
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 197/370 (53%), Gaps = 32/370 (8%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM + + LA A+G SPNP VG VIVK+G++VG+GF G HAE+ AL+ A E A+G
Sbjct: 3 YMSQALSLAKLAIGQVSPNPAVGAVIVKNGEVVGQGFTQPPGGDHAEIVALKQAAEKAKG 62
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A YV+LEPC H GRTPPCT A+I++ +K+V + LD NP+V+ KG + L DAGI V +G
Sbjct: 63 AALYVTLEPCCHQGRTPPCTVAIIESGIKEVYIATLDDNPLVSGKGKKELEDAGIKVHLG 122
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
+ + +++NEA+ I TG PF T +Y +S++G + G+ E +++ ++
Sbjct: 123 MMEREARQMNEAYFKYITTGMPFVTAKYAMSLDGKTGTRTGDSKWISNEESRHFAHYIRH 182
Query: 257 YDAIILSASSTKKYSIP--------ASQEPDANQPFRIITVSNHASPI-----RIPGLSE 303
+I++ +T P QP R+I N +P+ +PG +
Sbjct: 183 ISDVIMAGLNTILKDDPHLTARVNCGRGGTSHCQPTRVIIDDNGRAPLSSNVFHVPGNTI 242
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQL-NLKAVLDYCYSHGFCSVLVDLRGNYG 362
+ +K + T E ++G K +E + L +LK++L Y +G SVLV+ G
Sbjct: 243 VAVAKGL--TPEEKQAYDEVGAKVVEMPDERGLVDLKSLLRYLGQNGVTSVLVEGGG--- 297
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLI-----LKNLQPKMS 417
++L + L+ K++V V P+ G G + + LG LI L+++
Sbjct: 298 ---IVLGSLFDLKLVDKVLVFVAPIIIG--GKDAKIPVAGLGAELITDSAKLRDITTTAF 352
Query: 418 SQSIVLEGYL 427
Q +++ GY+
Sbjct: 353 GQDVLISGYV 362
>gi|331088370|ref|ZP_08337289.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
3_1_46FAA]
gi|330408614|gb|EGG88080.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
3_1_46FAA]
Length = 375
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 166/310 (53%), Gaps = 34/310 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA K G T+PNPMVG VIVKDGKI+GEG+H K G+ HAE A+ E
Sbjct: 3 DQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGELHAERNAIASLTES 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGA YV+LEPC H+G+TPPCTEA+I+ K++KVV+G DPNP V KG++ LR+AG+ V
Sbjct: 63 AEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGVQMLREAGVTV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
E C +LN F H I T P+ ++Y ++++G + + G +G + +Q
Sbjct: 123 VEDFMREECDQLNPVFFHYITTKTPYVVMKYAMTLDGKIATKTGASKWITGESARKEVQH 182
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRI---------PG--- 300
+Y I+ + A+ P + V SP+RI PG
Sbjct: 183 MRHQYMGIMAGIGTVL-----------ADDPMLNVRVEGWKSPVRIVCDSKLRIPPGSQI 231
Query: 301 -LSEESSSKVIVFTDGEITVE--PDMGTKGIETV----NLHQLNLKAVLDYCYSHGFCSV 353
S E ++ + + + E + T G+ET+ +Q++LK ++ + G S+
Sbjct: 232 VKSAEKYRTIVAYAEQKNAKEKIKILHTMGVETIYCPDEKNQIDLKKLMADLGNRGIDSI 291
Query: 354 LVDLRGNYGD 363
L++ G D
Sbjct: 292 LLEGGGTLND 301
>gi|407978100|ref|ZP_11158934.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Bacillus sp. HYC-10]
gi|407415362|gb|EKF36963.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Bacillus sp. HYC-10]
Length = 363
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 176/317 (55%), Gaps = 17/317 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM+ +E A G TSPNP+VG VIV++ +IVG G H KAG+PHAE+ AL AGE A+G
Sbjct: 7 YMKLALENARAMKGQTSPNPLVGAVIVRENEIVGVGAHMKAGEPHAEIHALNMAGEKAKG 66
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+H+GRT PC EAL+KA V+KVVV LDPNP+V +G+ L+DAGI V G
Sbjct: 67 ATIYVTLEPCSHHGRTGPCAEALVKAGVEKVVVAALDPNPLVAGRGIAILQDAGIQVITG 126
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
V ++ +NE F H I PF TL+ ++++G + + +E+ Y + ++
Sbjct: 127 VLEQESILMNEVFNHFITKKTPFVTLKAGITLDGKIASATSDSKWITSETSRYDAHHIRS 186
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
+ IL + T + P+ ++ P+ + P RI+ S ++P+ ++++ + I FT
Sbjct: 187 INDAILVGAQTVIHDDPSLTARIPNGHHPIRIVLDSKLSTPLTAKVVTDQMAPTWI-FTT 245
Query: 315 GEITVEP-----DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLK 369
+ E G I T ++ L+ VL S++++ G
Sbjct: 246 KQADKEKRAALEAAGVNVIMTDGGTRVPLQEVLQVLGERQVSSLMIEGGGQVN------A 299
Query: 370 EGIEQNLLQKIVVEVLP 386
+EQ L+ K+V+ + P
Sbjct: 300 SFLEQQLVDKLVIYMAP 316
>gi|392553134|ref|ZP_10300271.1| riboflavin biosynthesis protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 373
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 138/234 (58%), Gaps = 15/234 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCV+VKD +I+GEGFH +AG PHAEV AL+ AG+
Sbjct: 10 DHKYMARAIELAKRGRFTTTPNPNVGCVLVKDNQIIGEGFHIQAGGPHAEVHALKMAGDN 69
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E LIKA V +VV M+DPNP V +GL+ L DAGI+
Sbjct: 70 AKGATAYVTLEPCSHYGRTPPCAEGLIKAGVSRVVAAMVDPNPEVAGRGLKMLEDAGIET 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQ 252
G+ ++ + LN F+ R+ T PF + S++G + GE +ES
Sbjct: 130 DFGLLNDEAEALNLGFLKRMRTNLPFVRCKLAASLDGKTALENGESKWITSSESRRAVQD 189
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPD----------ANQPFRIITVS-NHASP 295
L E A++ A + + + PD QP R+I S N +P
Sbjct: 190 LRAESCAVLSGADTVIVDNAKLNVRPDELTDTDAKHSTRQPIRVIIDSQNRLTP 243
>gi|392940042|ref|ZP_10305686.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
siderophilus SR4]
gi|392291792|gb|EIW00236.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter
siderophilus SR4]
Length = 360
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 181/314 (57%), Gaps = 24/314 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM+R ++LA K G T+PNP+VG VIVK+GKI+GEG+H G PHAEV AL++A E +G
Sbjct: 4 YMKRALKLAEKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVEDVKG 63
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+T +V+LEPC+HYG+TPPC E +IK+ +K+V + M DPNP V+ G++RL++AGI+V VG
Sbjct: 64 STMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVQVG 123
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQLLQ 255
+ ++ ++LNE F+ I T PF L+ +S++G + G +S + ++
Sbjct: 124 MMEKEARKLNEIFVKYITTKIPFVILKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRG 183
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
AI++ ++ K + ++ P RII S +P+ + ++++ +I T+
Sbjct: 184 RVSAIMVGVNTVIKDNPMLTTRLEGYKSPVRIIVDSRGRTPLASNVIRDKAAKTIIATTE 243
Query: 315 GEITVEPDMGTKGIETVNLH---------QLNLKAVLDYCYSHGFCSVLVDLRG--NYGD 363
+ P+ K +E +++ ++ LK ++ G SVL++ G N+
Sbjct: 244 ----LMPNSVRKKLEDMDIEVIILKNDNGKVPLKELMIKLGERGIDSVLIEGGGTLNWS- 298
Query: 364 LEMLLKEGIEQNLL 377
LKEGI ++
Sbjct: 299 ---ALKEGIVDKVM 309
>gi|336440555|ref|ZP_08620141.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
1_1_57FAA]
gi|295108673|emb|CBL22626.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ruminococcus obeum A2-162]
gi|336012785|gb|EGN42680.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
1_1_57FAA]
Length = 375
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 166/310 (53%), Gaps = 34/310 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA K G T+PNPMVG VIVKDGKI+GEG+H K G+ HAE A+ E
Sbjct: 3 DQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGELHAERNAIASLTES 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGA YV+LEPC H+G+TPPCTEA+I+ K++KVV+G DPNP V KG++ LR+AG+ V
Sbjct: 63 AEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGVQMLREAGVTV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
E C +LN F H I T P+ ++Y ++++G + + G +G + +Q
Sbjct: 123 VEDFMREECDQLNPVFFHYITTKTPYVVMKYAMTLDGKIATKTGASKWITGESARKEVQH 182
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRI---------PG--- 300
+Y I+ + A+ P + V SP+RI PG
Sbjct: 183 MRHQYMGIMAGIGTVL-----------ADDPMLNVRVEGWKSPVRIVCDSKLRIPPGSQI 231
Query: 301 -LSEESSSKVIVFTDGEITVE--PDMGTKGIETV----NLHQLNLKAVLDYCYSHGFCSV 353
S E ++ + + + E + T G+ET+ +Q++LK ++ + G S+
Sbjct: 232 VKSAEKYRTIVAYAEQKNAKEKIKILHTMGVETIYCPDEKNQIDLKKLMADLGNRGIDSI 291
Query: 354 LVDLRGNYGD 363
L++ G D
Sbjct: 292 LLEGGGTLND 301
>gi|294101991|ref|YP_003553849.1| riboflavin biosynthesis protein RibD [Aminobacterium colombiense
DSM 12261]
gi|293616971|gb|ADE57125.1| riboflavin biosynthesis protein RibD [Aminobacterium colombiense
DSM 12261]
Length = 369
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 128/197 (64%), Gaps = 4/197 (2%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+DD +YMRR + LA + G TSPNP+VGCVIVK+ IV EG+H G PHAEV AL+ AG
Sbjct: 7 RDDEYYMRRAISLARRGTGQTSPNPLVGCVIVKEDTIVAEGYHRSYGMPHAEVEALQRAG 66
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A+GAT YV+LEPC H+G+TPPC L ++KV +VV+GM+DPN +VN KG+E LR +
Sbjct: 67 DGAKGATVYVNLEPCAHFGKTPPCAPQLARSKVSRVVIGMVDPNAVVNGKGVEILRSNQL 126
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
GV ++ CK +N FI R+ +P+ TL+ +++G + GE +E +
Sbjct: 127 ITETGVLEDECKWVNRGFIRRVRDQRPWFTLKSASTIDGQIALPNGESQWITSEESRNKA 186
Query: 252 QLLQ-EYDAIILSASST 267
LL+ E+D I++ +
Sbjct: 187 HLLRAEHDGIMVGVGTV 203
>gi|407368392|ref|ZP_11114924.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase [Pseudomonas
mandelii JR-1]
Length = 377
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 126/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCVIV+DG+IVGEG+H + G+PHAEV ALR AG+
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHAEVHALRAAGDK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+G TPPC +AL+ A + +VV M DPNP V +GL+RL AGI +
Sbjct: 71 ARGATAYVTLEPCSHHGHTPPCADALVNAGLARVVAAMQDPNPSVAGRGLQRLAQAGIAI 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAQASVVLTGADT 204
>gi|429122514|ref|ZP_19183091.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter sakazakii 680]
gi|426322982|emb|CCK13828.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Cronobacter sakazakii 680]
Length = 367
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 116/165 (70%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA + +T PNP VGCVIVK+G IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|78186602|ref|YP_374645.1| riboflavin biosynthesis protein RibD [Chlorobium luteolum DSM 273]
gi|78166504|gb|ABB23602.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Chlorobium
luteolum DSM 273]
Length = 366
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 188/367 (51%), Gaps = 24/367 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE- 135
D +M RC+ELA + GS SPNPMVG +IV DG ++GEG+H + G PHAEV A+ +
Sbjct: 6 DACHMARCIELALQGAGSVSPNPMVGSLIVCDGSVIGEGYHMQCGGPHAEVNAIAAVSDP 65
Query: 136 -LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
L +T YV+LEPC+H+GRTPPC++ +I+ + +VVVG DPNP V +G+ RLRD+G+
Sbjct: 66 SLLSRSTLYVNLEPCSHFGRTPPCSDLIIEKMIPRVVVGCRDPNPKVAGRGIMRLRDSGV 125
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYY 250
DV GV + C RLNEAFI G+PF L+ +++G + G +E+
Sbjct: 126 DVYEGVLEAECLRLNEAFITSHTKGRPFVALKIAETLDGRIATADGASKWITGSEARREV 185
Query: 251 SQLLQEYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
+L YDA++ A++ + ++ + P R++ S P P S S +
Sbjct: 186 HRLRSTYDAVLAGAATVLLDRAQLTVRDVEGRNPLRVVLDSGLRVPFDAPVFS--SDAPT 243
Query: 310 IVFTDGEI--TVEPDMG-TKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRGNYG 362
+VF G + T E KGIE V + + L+L VL + S+LV+
Sbjct: 244 LVFAAGRMQGTTEASAAEKKGIEVVFVREVPGGLDLSQVLRELHRRDVLSLLVESGSR-- 301
Query: 363 DLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQS 420
L + L K+++ + P G+D L + + L+ Q K +
Sbjct: 302 ----LSAAFVRAGLADKLLMFIAPKLFGADALPSFAPLAVEAPSGAVQLEFGQSKAFGRD 357
Query: 421 IVLEGYL 427
I+LE Y
Sbjct: 358 ILLEAYF 364
>gi|386389505|ref|ZP_10074319.1| riboflavin biosynthesis protein RibD [Haemophilus
paraphrohaemolyticus HK411]
gi|385695275|gb|EIG25837.1| riboflavin biosynthesis protein RibD [Haemophilus
paraphrohaemolyticus HK411]
Length = 361
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+R + LA + G TSPNP+VGCVIVK+GKIV EG+H K G HAE A+ ++
Sbjct: 3 DIKYMQRAINLAERGRGWTSPNPLVGCVIVKNGKIVAEGYHEKIGGWHAERNAILNSNAD 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC H+GRTPPC+ LI+ +KKV +G DPNP+V+ KG+++LR AG++V
Sbjct: 63 ITGATAYVTLEPCCHHGRTPPCSNLLIERGIKKVFIGSRDPNPLVSGKGVKQLRTAGVEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
E C +LN F H I T +P+ L+Y ++ +G + GE +G +QE
Sbjct: 123 VEDFMREECDKLNPIFFHYIQTKRPYVLLKYAMTADGKIATSTGESKWITGETARAKVQE 182
Query: 257 ----YDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
Y AI++ + + S+ P+A QP R++ S +P+ + + + ++
Sbjct: 183 TRHQYSAIMVGVETVLADNPMLNSRIPNARQPVRVVCDSQLRTPLDCQLVQTANEYRTVI 242
Query: 312 FT 313
T
Sbjct: 243 AT 244
>gi|291562115|emb|CBL40931.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
/5-amino-6-(5-phosphoribosylamino)uracil reductase
[butyrate-producing bacterium SS3/4]
Length = 369
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 163/309 (52%), Gaps = 21/309 (6%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
D+D YM R +ELA +G TSPNP+VG VIVKDG+I+GEG+H + G+ HAE A+
Sbjct: 2 TDRD---YMLRAIELAKGGLGWTSPNPLVGAVIVKDGRIIGEGYHERCGELHAERNAIAS 58
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
E AEGAT YV+LEPC HYG+TPPCTEA+++ K+ +VV+G DPNP+V KG LR A
Sbjct: 59 LTESAEGATLYVTLEPCCHYGKTPPCTEAILEQKIARVVIGSRDPNPLVAGKGAAILRAA 118
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY 249
G+ V E C LN F H I P+ ++Y ++ +G + + G+ ES
Sbjct: 119 GVRVEEDFMREECDALNPVFFHYITKKTPYVVMKYAMTADGKIAARTGDSKWITGESARK 178
Query: 250 YSQLLQEYDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSS 307
Q L+ I++ T P + P P RII S P+ +
Sbjct: 179 KVQELRHQYMGIMAGIGTVLADDPMLNVRIPGLKSPVRIICDSGLRIPMDSQIVKTAKEY 238
Query: 308 KVIVFTDGEIT---------VEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVL 354
+ IV GE + E + T G+ETV++ +++L+ +++Y G SVL
Sbjct: 239 RTIVAYAGEHSGEGCKEAEEKEEQLHTAGVETVSVPDADGRVDLRKLMEYLGKQGIDSVL 298
Query: 355 VDLRGNYGD 363
++ G D
Sbjct: 299 LEGGGTLND 307
>gi|56708681|ref|YP_170577.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110671153|ref|YP_667710.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
tularensis FSC198]
gi|134302741|ref|YP_001122709.1| riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis WY96-3418]
gi|254371312|ref|ZP_04987314.1| hypothetical protein FTBG_01094 [Francisella tularensis subsp.
tularensis FSC033]
gi|254875556|ref|ZP_05248266.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
tularensis MA00-2987]
gi|379717907|ref|YP_005306243.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Francisella
tularensis subsp. tularensis TIGB03]
gi|379726510|ref|YP_005318696.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Francisella
tularensis subsp. tularensis TI0902]
gi|385795397|ref|YP_005831803.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis NE061598]
gi|421752660|ref|ZP_16189679.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis AS_713]
gi|421754524|ref|ZP_16191495.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 831]
gi|421756346|ref|ZP_16193263.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 80700075]
gi|421758253|ref|ZP_16195108.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 80700103]
gi|421760078|ref|ZP_16196901.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 70102010]
gi|424675403|ref|ZP_18112309.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 70001275]
gi|56605173|emb|CAG46304.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110321486|emb|CAL09687.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
tularensis FSC198]
gi|134050518|gb|ABO47589.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151569552|gb|EDN35206.1| hypothetical protein FTBG_01094 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841555|gb|EET19991.1| riboflavin biosynthesis protein ribD [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159932|gb|ADA79323.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis NE061598]
gi|377827959|gb|AFB81207.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Francisella
tularensis subsp. tularensis TI0902]
gi|377829584|gb|AFB79663.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase [Francisella
tularensis subsp. tularensis TIGB03]
gi|409084548|gb|EKM84721.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 831]
gi|409084574|gb|EKM84746.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis AS_713]
gi|409084808|gb|EKM84970.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 80700075]
gi|409089669|gb|EKM89704.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 70102010]
gi|409090023|gb|EKM90049.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 80700103]
gi|417433936|gb|EKT88919.1| Riboflavin biosynthesis protein RibD [Francisella tularensis subsp.
tularensis 70001275]
Length = 355
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 179/326 (54%), Gaps = 24/326 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL A +
Sbjct: 5 DKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGEAHAEVHALTKAVDK 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H GRTPPCT+ +IKA +KKV++ LDPNP V KG+ERL++AGI V
Sbjct: 65 AKGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G + G+ ++ + + +
Sbjct: 125 EVGLLEKQAQELNKIFFHYQTTKKPFVYAKWAMSLDGKIAVNDGDSKKISSHQAFVNTHE 184
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPI----RIPGLSEES 305
L DAI++ + + + N+ P R I ++NH + I R+ L +
Sbjct: 185 LRNICDAILIGKQTLIDDNPSLDVRININKIKHPTRFI-LANHLTTINHNWRV--LDQRH 241
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ + V + V + GIE L HQ+ L +L+ G S+LV+ GN
Sbjct: 242 AKTIFVCSKISARVATKLNQLGIEYWLLPQSQHQVCLDTLLEKMGKIGITSLLVE-GGN- 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLPV 387
L I Q L+ + + PV
Sbjct: 300 ----KTLNSFINQKLVNEFYTYLAPV 321
>gi|402756965|ref|ZP_10859221.1| ribD [Acinetobacter sp. NCTC 7422]
Length = 366
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 130/190 (68%)
Query: 71 QNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFAL 130
Q + + +M++ + LA + ST PNP VGCVIVK+G+++GEG+HPKAGQPHAEVFAL
Sbjct: 6 QEHLSEHQHWMQQAIALARRGQYSTKPNPNVGCVIVKEGQLIGEGYHPKAGQPHAEVFAL 65
Query: 131 RDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
R AGE A+GATAYV+LEPC HYGRTPPC EAL+KA+VKKVVV DPNP+V KG++ L+
Sbjct: 66 RQAGENAKGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACSDPNPLVAGKGVQILQ 125
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYY 250
AGI+V GV + K LN F+ + TG P+ L+ S++G GE +G
Sbjct: 126 AAGIEVETGVCADTAKTLNSGFLKAMSTGLPYVRLKIASSLDGRTAMASGESKWITGTAA 185
Query: 251 SQLLQEYDAI 260
Q +Q + AI
Sbjct: 186 RQDVQHWRAI 195
>gi|347533641|ref|YP_004840404.1| riboflavin biosynthesis protein RibD [Roseburia hominis A2-183]
gi|345503789|gb|AEN98472.1| riboflavin biosynthesis protein RibD [Roseburia hominis A2-183]
Length = 375
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 166/310 (53%), Gaps = 34/310 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA K G T+PNPMVG VIVKDGKI+GEG+H K G+ HAE A+ E
Sbjct: 3 DQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGKIIGEGYHKKYGELHAERNAIASLTES 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGA YV+LEPC H+G+TPPCTEA+I+ K++KVV+G DPNP V KG++ LR+AG+ V
Sbjct: 63 AEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIRKVVIGSRDPNPKVAGKGVQMLREAGVTV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
E C +LN F H I T P+ ++Y ++++G + + G +G + +Q
Sbjct: 123 VEDFMREECDQLNPVFFHYITTKTPYVVMKYAMTLDGKIATKTGASKWITGESARKEVQH 182
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRI---------PG--- 300
+Y I+ + A+ P + V SP+RI PG
Sbjct: 183 MRHQYMGIMAGIGTVL-----------ADDPMLNVRVEGWKSPVRIVCDSKLRIPPGSQI 231
Query: 301 -LSEESSSKVIVFTDGEITVE--PDMGTKGIETV----NLHQLNLKAVLDYCYSHGFCSV 353
S E ++ + + + E + T G+ET+ +Q++LK ++ + G S+
Sbjct: 232 VKSAEKYRTIVAYAEQKNAEEKIKILHTMGVETIYCPDEKNQIDLKKLMADLGNRGIDSI 291
Query: 354 LVDLRGNYGD 363
L++ G D
Sbjct: 292 LLEGGGTLND 301
>gi|146310543|ref|YP_001175617.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter sp. 638]
gi|145317419|gb|ABP59566.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Enterobacter sp.
638]
Length = 367
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/238 (45%), Positives = 139/238 (58%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEIYMARALKLAQRGRFTTHPNPNVGCVIVKDGVIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIDAGVARVVAAMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMADTEALNKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWVTSPQSRRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA--------SQEPDA-------NQPFRIITVS-NHASP 295
L+ IL++S T PA +Q+ A QP RI+ S N +P
Sbjct: 183 LRAQSHAILTSSETVLADDPAMTVRWDELNQDTQALYPQENLRQPLRIVIDSQNRVTP 240
>gi|423693809|ref|ZP_17668329.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
SS101]
gi|388002113|gb|EIK63442.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
SS101]
Length = 375
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG+IVGEG+H + G+PHAE ALR AG+
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGDK 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRTPPC +AL+ A V +VV GM DPNP V +G++RL AGI+V
Sbjct: 69 ARGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 129 RSGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 188
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 189 LRAEASVVLTGADT 202
>gi|374320530|ref|YP_005073659.1| riboflavin biosynthesis protein
(diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Paenibacillus terrae HPL-003]
gi|357199539|gb|AET57436.1| riboflavin biosynthesis protein
(diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Paenibacillus terrae HPL-003]
Length = 369
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 195/363 (53%), Gaps = 22/363 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMR +E A A G T PNP+VG VIV +G+IVG G H K G+PHAE+ ALR AGE A+G
Sbjct: 10 YMRLALENAKSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMAGEHAQG 69
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+H+GRT PC EA+++A +++VV+ LDPNP+V+ +G++ L+DAGI+V VG
Sbjct: 70 ATIYVTLEPCSHHGRTGPCAEAIVQAGIRRVVIAALDPNPLVSGRGVQILKDAGIEVIVG 129
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
V ++ R+NE F IV+ +P+ T++ ++++G + + E +E L+
Sbjct: 130 VCEQESVRMNEVFNQYIVSKRPYITIKSAVTLDGKIATRTSESKWITSEVAREDVHRLRH 189
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI---- 310
IL T + P ++ P+ P RII S P+ +++ + I
Sbjct: 190 EHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSTLRIPLDARVITDGEAPTWIFTGR 249
Query: 311 VFTDGEITVEPDMGTKGIETV--NLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
+ +G+ +G K T N ++NL +LD + SV V+ G E +
Sbjct: 250 AYDEGKRNQLEQLGVKVYPTQDENSDRVNLPQMLDILGAAEVSSVFVE-----GGAE-VN 303
Query: 369 KEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL----LNSLGKRLILKNLQPKMSSQSIVLE 424
++Q L K+V+ + P G G P L ++++ + L++L +E
Sbjct: 304 ASFVQQGLADKLVLYIAPKLVGGRGA-PGFLGGEGVSAMSDAVALQDLSITQVGVDWKIE 362
Query: 425 GYL 427
GY
Sbjct: 363 GYF 365
>gi|294784869|ref|ZP_06750157.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_27]
gi|294486583|gb|EFG33945.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 3_1_27]
Length = 369
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 170/301 (56%), Gaps = 23/301 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + G +PNP+VG VIVKDGKI+GEG+H K G PHAEV+AL +AGE
Sbjct: 6 DEKYMARAIELAKRGTGGVNPNPLVGAVIVKDGKIIGEGWHKKFGGPHAEVWALNEAGEN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+H G+TPPC + +I+A +K+ VV +DPNP+V KG++ + +AGI+V
Sbjct: 66 AKGATVYVTLEPCSHQGKTPPCAKRIIEAGIKRCVVACIDPNPLVAGKGMKIIENAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
+GV ++ K +N+ F+ I P+ L+ ++++G + + G+ + + +Q
Sbjct: 126 ELGVLEKEAKDVNKIFLKYIENKIPYLFLKCGITLDGKIATRSGKSKWITNEIAREKVQF 185
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQ-------PFRIITVSNHASPIRIPGLSEES 305
++ AI++ ++ K + D + PFR++ N SPI
Sbjct: 186 LRTKFMAIMVGINTVLKDNPSLDSRLDEEKSGIEKRNPFRVVIDPNLESPIE-------- 237
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+K + F DG+ + KG+E + ++ NL + + G + D+ G LE
Sbjct: 238 -AKFLNFNDGKAIIITSNDNKGLEKIEKYK-NLGT--RFIFLEGKIFKMEDILKELGKLE 293
Query: 366 M 366
+
Sbjct: 294 I 294
>gi|148380824|ref|YP_001255365.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
ATCC 3502]
gi|153933315|ref|YP_001385131.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
ATCC 19397]
gi|153935215|ref|YP_001388600.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
Hall]
gi|148290308|emb|CAL84432.1| riboflavin biosynthesis protein ribd [includes:
diaminohydroxyphosphoribosylaminopyrimidine deaminase
and 5-amino-6-(5-phosphoribosylamino)uracil reductase
[Clostridium botulinum A str. ATCC 3502]
gi|152929359|gb|ABS34859.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
ATCC 19397]
gi|152931129|gb|ABS36628.1| riboflavin biosynthesis protein RibD [Clostridium botulinum A str.
Hall]
Length = 365
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 195/372 (52%), Gaps = 28/372 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++V + KI+GEG+H G PHAEV+AL++AG
Sbjct: 2 EDYNFYMEKALKLAERGEGKVNPNPKVGAIVVNNNKIIGEGYHKYFGGPHAEVYALKEAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E+++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGY-Y 250
+V G+ ++ K+LNE FI I KPF L+ +++G + + GE E Y
Sbjct: 122 EVITGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATKTGESKWITGEEARYKV 181
Query: 251 SQLLQEYDAIILSASS-TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
Q+ + I++ + K + ++ P II S+ P+ L + +
Sbjct: 182 HQIRNDLSGIMVGIGTIIKDNPLLNTRIERGRSPKAIIVDSSLRIPLESKILETLNERTI 241
Query: 310 IVFTD------GEITVEPDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVDLRGNY 361
+ T + ++G K +E + + L ++ Y S G S+L L G
Sbjct: 242 YIATTKKHNNFSKKNALENLGAKVLEFEENEEGKVPLNELMQYLGSEGVDSIL--LEGGS 299
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSD-----GGNPHTLLNSLGKRLILKNLQPK 415
LKEGI + K++ + P + G D GGN + SL L+NL+ +
Sbjct: 300 TLNFSALKEGI----VDKVMCFIAPKIMGGQDSKNMIGGNG---VESLKDIFNLQNLKFE 352
Query: 416 MSSQSIVLEGYL 427
Q I++EGY+
Sbjct: 353 KIGQDILIEGYV 364
>gi|389841971|ref|YP_006344055.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii ES15]
gi|387852447|gb|AFK00545.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii ES15]
Length = 367
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 116/165 (70%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA + +T PNP VGCVIVK+G IVGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|113954800|ref|YP_730035.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9311]
gi|113882151|gb|ABI47109.1| riboflavin biosynthesis protein RibD [Synechococcus sp. CC9311]
Length = 365
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 6/215 (2%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDAGELA 137
+MRR ++LA A G TSPNP+VG V++ G +VGEGFH KAGQ HAEV AL AG A
Sbjct: 10 LWMRRALQLAALAEGQTSPNPLVGAVVLDAQGALVGEGFHAKAGQAHAEVGALAQAGGRA 69
Query: 138 EGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVT 197
+G T V+LEPC H GRTPPC+EA+I+A +++VVV + DP+P V G++RLRDAG++V
Sbjct: 70 KGGTIIVTLEPCCHQGRTPPCSEAVIQAGIQRVVVALKDPDPRVAGGGIQRLRDAGLEVI 129
Query: 198 VGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQL 253
GV + N AFIHR+ TG+P+ L++ +S++G GE S G+ QL
Sbjct: 130 TGVLEAEAAHQNRAFIHRVQTGRPWGLLKWAMSLDGRTALPNGESQWISAPPARGWVHQL 189
Query: 254 LQEYDAIILSASSTKKYS-IPASQEPDANQPFRII 287
DA+I+ + + + + S+ A +P R++
Sbjct: 190 RAGCDAVIVGGGTVRADNPLLTSRGVRAPEPLRVV 224
>gi|188534657|ref|YP_001908454.1| riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99]
gi|188029699|emb|CAO97578.1| Riboflavin biosynthesis protein RibD [Erwinia tasmaniensis Et1/99]
Length = 367
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCV+V+D +IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEVYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHLRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+ GAT YV+LEPC+H+GRTPPC +ALI A VK+VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 SRGATVYVTLEPCSHHGRTPPCCDALIAAGVKRVVTAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + LN F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGRTAMASGESQWITSPEARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ + ILS S T PA
Sbjct: 183 LRAQSSAILSTSGTVLADNPA 203
>gi|157691490|ref|YP_001485952.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil
reductase/diaminohydroxyphosphoribosylaminopyrimidine
deaminase [Bacillus pumilus SAFR-032]
gi|157680248|gb|ABV61392.1| bifunctional 5-amino-6-(5-phosphoribosylamino)uracil
reductase/diaminohydroxyphosphoribosylaminopyrimidine
deaminase [Bacillus pumilus SAFR-032]
Length = 361
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 187/362 (51%), Gaps = 27/362 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
KDD FYM + A G TSPNP+VG VIV+ G+IVG G H KAG+PHAE+ AL+ A
Sbjct: 2 KDDVFYMELAIANAKAMKGQTSPNPLVGAVIVQQGEIVGMGAHMKAGEPHAEIHALQMAR 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GA YV+LEPC+HYG+T PCTEA+IK+ VK+VV+ DPNP+V KG+ L+ AGI
Sbjct: 62 EKAKGAHLYVTLEPCSHYGKTGPCTEAIIKSGVKRVVIATQDPNPLVAGKGMTMLKQAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV----LDQLGEGVAESGGYY 250
+V G+ + RLN F H I + P+ L+ +S++G + L+ E+
Sbjct: 122 EVDEGICKQEADRLNVPFFHFIQSDFPYVILKSAISLDGKIATADLESKWITGTEARKEV 181
Query: 251 SQLLQEYDAIILSASS-TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
QL QE DA+I + + + ++ + QP R+I S P+ L++ + +
Sbjct: 182 QQLRQEADAVITGVETIIQDDAGLIVKDSNMTQPIRVILDSTLRIPLHAKCLTDRRAETI 241
Query: 310 IVFT------DGEITVEPDMG---TKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGN 360
I + E+ +E T G E ++H VL SVLV+ G+
Sbjct: 242 ICISRMYDQKKYELLIEKGHQVYITSGEERTDIHD-----VLRMLKERSVMSVLVEAGGS 296
Query: 361 YGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNSLGKRLILKNLQPKMSSQS 420
+E +L+ + V+ + P+ G G N T G + + + ++P S
Sbjct: 297 VS------ASFLEASLVNEAVIYMAPLLIG--GKNAPTFFEGDGVKKLKEAIRPADVEYS 348
Query: 421 IV 422
+V
Sbjct: 349 MV 350
>gi|253576364|ref|ZP_04853694.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon
786 str. D14]
gi|251844257|gb|EES72275.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. oral taxon
786 str. D14]
Length = 373
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 175/331 (52%), Gaps = 36/331 (10%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +YM +++A +A G T NP+VG V+VKDG +VG G H K G PHAEV AL AG
Sbjct: 5 DDEYYMALALDMAERAQGQTGTNPVVGAVVVKDGALVGLGTHLKRGTPHAEVHALNMAGS 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
AEG+T YV+LEPC+H+G TPPC E LI KV++VVV DPNP+V KG+E LR AGI+
Sbjct: 65 QAEGSTVYVTLEPCSHHGLTPPCAERLIHEKVQRVVVACEDPNPLVAGKGIELLRAAGIE 124
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGG--YYS 251
V VGV E +LN FI I TG P+ T++ +++G + + G+ ++ G
Sbjct: 125 VEVGVLRERALKLNRRFIKFITTGMPYVTIKSASTLDGKLASRTGDSKWISNEGAREIVH 184
Query: 252 QLLQEYDAIILSASS--------TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSE 303
+ + AI++ AS+ T + S+P P RII S P L +
Sbjct: 185 TMRHRHQAIMVGASTILADDPQLTTRLSVPGL------SPIRIIADSTLRIPETAQVLRD 238
Query: 304 ESSSKVIVFTDGEITVEPDMGTK----GIETVNLH---QLNLKAVLDYCYSHGFCSVLVD 356
+ IV T+ +PD + G E + Q++L+ L G SVLV+
Sbjct: 239 GQAPTWIVTTE---QADPDKAARLIHLGAEVLRCGSGPQVDLRNALVQLGQRGISSVLVE 295
Query: 357 LRGNY-GDLEMLLKEGIEQNLLQKIVVEVLP 386
G G L +EQ L+ +IV+ + P
Sbjct: 296 GGGRLNGSL-------LEQQLVDEIVLFLAP 319
>gi|336419106|ref|ZP_08599373.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 11_3_2]
gi|336164111|gb|EGN67023.1| riboflavin biosynthesis protein RibD [Fusobacterium sp. 11_3_2]
Length = 369
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 170/301 (56%), Gaps = 23/301 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + GS +PNP+VG V+VKDGKI+GEG+H K G PHAEV+AL +AGE
Sbjct: 6 DEKYMTRAIELAKRGTGSVNPNPLVGAVVVKDGKIIGEGWHKKYGGPHAEVWALNEAGEN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC+H G+TPPC + +++A +K+ VV +DPNP+V KG++ + DAGI+V
Sbjct: 66 AEGATIYVTLEPCSHQGKTPPCAKRIVEAGIKRCVVACIDPNPLVAGKGIKIIEDAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
+GV ++ K +N+ F+ I P+ L+ ++++G + + G+ + + +Q
Sbjct: 126 KLGVLEKEAKDVNKIFLKYIENKIPYLFLKCGITLDGKIATRSGKSKWITNEIVREKVQF 185
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQ-------PFRIITVSNHASPIRIPGLSEES 305
++ AI++ ++ K + D + PFR++ N SPI
Sbjct: 186 LRTKFMAIMVGINTVLKDNPSLDSRLDEKKFGIEKRNPFRVVIDPNLESPI--------- 236
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+K + F DG+ + + +E + ++ NL + + G + D+ G LE
Sbjct: 237 EAKFLNFNDGKAIIITSNDNRELEKIKEYK-NLGT--RFIFLEGKIFKMKDILKELGKLE 293
Query: 366 M 366
+
Sbjct: 294 I 294
>gi|217972396|ref|YP_002357147.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223]
gi|217497531|gb|ACK45724.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS223]
Length = 384
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR AGE
Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEH 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V
Sbjct: 71 ARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
VG+ + LN F+ R+ +G P T++ S++G
Sbjct: 131 DVGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|126175361|ref|YP_001051510.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS155]
gi|386342107|ref|YP_006038473.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS117]
gi|125998566|gb|ABN62641.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Shewanella baltica OS155]
gi|334864508|gb|AEH14979.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS117]
Length = 384
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR AGE
Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEH 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V
Sbjct: 71 ARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
VG+ + LN F+ R+ +G P T++ S++G
Sbjct: 131 DVGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|300813870|ref|ZP_07094175.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon
836 str. F0141]
gi|300512057|gb|EFK39252.1| riboflavin biosynthesis protein RibD [Peptoniphilus sp. oral taxon
836 str. F0141]
Length = 372
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 192/371 (51%), Gaps = 35/371 (9%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA---GEL 136
YM +ELA K G T NPMVGCVIV D +I+G G+H K G HAE A+ DA GE
Sbjct: 10 YMSLAMELAEKGKGFTLTNPMVGCVIVNDDRIIGRGYHKKFGDLHAETMAIEDAKKNGES 69
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EG+T YV+LEPC HYG+ PPCT+A+I+ K+KKVV+ +DPN V+ KG++ L DAGI+V
Sbjct: 70 LEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGIKTLEDAGIEV 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
G+ +E +LNE F H I T +PF T++ ++++G + G+ S Y +
Sbjct: 130 VEGIMEEEGLKLNEEFFHFIKTQRPFVTMKSAMTLDGKIASVTGDSKWISSQISRDYVHK 189
Query: 253 LLQEYDAIILSASSTKKY--SIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L E +AI++ + K S+ + P +I+ S P+ LS + +I
Sbjct: 190 LRAENNAIMVGIGTVLKDDPSLNVRIYGNYKNPTKILVDSKLRIPLDAKLLSSSDAPTII 249
Query: 311 VFTDGEITVEPDMGTKGIETVNLH---------QLNLKAVLDYCYSHGFCSVLVDLRGNY 361
T+G + + K E N+H +++L + CSVL++ GN
Sbjct: 250 ACTEG---YDTEKYNKLKEMANVHILVCKKKDGRVDLLDLFSKLKDFDICSVLLEGGGNL 306
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNP-----HTLLNSLGKRLILKNLQPKM 416
+ ML +NL+ +++ + P G G +P TL+ K +K+ Q +
Sbjct: 307 -NYSML-----RENLVDRLIFFIGPKIIGGSGLSPVAGEGITLMKDAIK---IKDFQVEK 357
Query: 417 SSQSIVLEGYL 427
Q I++ Y+
Sbjct: 358 MGQDILINAYV 368
>gi|383753813|ref|YP_005432716.1| putative 5-amino-6-(5-phosphoribosylamino) uracil reductase /
diaminohydroxyphosphoribosylaminopyrimi dine deaminase
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381365865|dbj|BAL82693.1| putative 5-amino-6-(5-phosphoribosylamino) uracil reductase /
diaminohydroxyphosphoribosylaminopyrimi dine deaminase
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 364
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 171/318 (53%), Gaps = 13/318 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +MR + LA A G TSPNP+VG VIV++G+IVG G+H KAG PHAE+ AL AG+L
Sbjct: 3 DEDFMRVALNLARNATGRTSPNPLVGAVIVREGRIVGAGWHRKAGTPHAEIHALNMAGDL 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+HYGRT PC EA++KA +K+ V+ M DPNP V KG+ L AGI+V
Sbjct: 63 AKGATLYVTLEPCSHYGRTGPCAEAVVKAGIKRCVIAMGDPNPKVAGKGIAILEQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + LNE F+H I PF L+ +S++G + G+ +G + E
Sbjct: 123 RCGVLEAEAMALNEVFLHWIREKMPFVVLKTAMSLDGKIATHTGKSQWITGEAARARVHE 182
Query: 257 YDAI---ILSASSTKKYSIPA--SQEPDAN--QPFRIITVSNHASPIRIPGLSEESSSKV 309
Y + I+ T P+ ++ P+ P RI+ S +P+ +++ ++ +
Sbjct: 183 YRDLYDGIMVGIGTVLADDPSLTTRLPNGTGKNPVRIVVDSKARTPLDAKLVNDGAALTI 242
Query: 310 IVFTDG----EITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG--NYGD 363
I T+ + D G + + Q++L ++ CSV V+ G N+
Sbjct: 243 IAVTEAAPKDRVQALKDKGVAIMIAGSGPQVDLPLLMKKLGEMEICSVFVEGGGTLNFAL 302
Query: 364 LEMLLKEGIEQNLLQKIV 381
L+ L + + KI+
Sbjct: 303 LQAGLVSKVHAFIAPKII 320
>gi|387773972|ref|ZP_10129252.1| riboflavin biosynthesis protein RibD [Haemophilus parahaemolyticus
HK385]
gi|386903059|gb|EIJ67879.1| riboflavin biosynthesis protein RibD [Haemophilus parahaemolyticus
HK385]
Length = 361
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 136/225 (60%), Gaps = 5/225 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+R + LA + G TSPNP+VGCVIVK+GKIV EG+H K G HAE A+ ++
Sbjct: 3 DANYMQRAISLAEQGRGWTSPNPLVGCVIVKNGKIVAEGYHEKIGGWHAERNAILNSDTD 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V+ KG ++LR AGI+V
Sbjct: 63 LSGATAYVTLEPCCHHGRTPPCSDLLIEHGIKKVFIGSRDPNPLVSGKGAKQLRAAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
E C +LN F H I T +P+ L+Y ++ +G + GE +G Q
Sbjct: 123 VEDFMREECDKLNPIFFHYIQTKRPYVLLKYAMTADGKIATSTGESKWITGETARTKVQQ 182
Query: 253 LLQEYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + ++ P+A QP RI+ S +P+
Sbjct: 183 TRHQYSAIMVGVETVLADNPMLNARIPNAKQPVRIVCDSQLRTPL 227
>gi|440288790|ref|YP_007341555.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Enterobacteriaceae bacterium strain FGI 57]
gi|440048312|gb|AGB79370.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Enterobacteriaceae bacterium strain FGI 57]
Length = 367
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/238 (44%), Positives = 139/238 (58%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIV G+IVGEGFH +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARALKLAARGRFTTHPNPRVGCVIVNQGEIVGEGFHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA---------------SQEPDANQPFRIITVS-NHASP 295
L+ IL++S+T PA E + QP RI+ S N +P
Sbjct: 183 LRAESHAILTSSATVLADDPALTVRWNELSAQTQALYAEENLRQPVRIVVDSQNRVTP 240
>gi|352093492|ref|ZP_08954663.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 8016]
gi|351679832|gb|EHA62964.1| riboflavin biosynthesis protein RibD [Synechococcus sp. WH 8016]
Length = 365
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 140/224 (62%), Gaps = 6/224 (2%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVF 128
+Q K +MRR ++LA A G TSPNP+VG V++ G +VGEGFH KAGQ HAEV
Sbjct: 1 MQAGCKHWNGWMRRALQLAALAEGQTSPNPLVGAVVLDAQGVLVGEGFHAKAGQAHAEVG 60
Query: 129 ALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLER 188
AL AG A+G T V+LEPC H GRTPPC +A+I A +++VVV + DP+P V G++R
Sbjct: 61 ALAQAGARAQGGTIIVTLEPCCHQGRTPPCAQAVIAAGIQRVVVALTDPDPRVAGGGIQR 120
Query: 189 LRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG- 247
LRDAG++V GV + + N AF+HR+ TG+P+A L++ +S++G GE S
Sbjct: 121 LRDAGLEVITGVLEAEAAQQNRAFVHRVQTGRPWALLKWAMSLDGRTALPNGESQWISAP 180
Query: 248 ---GYYSQLLQEYDAIILSASSTKKYS-IPASQEPDANQPFRII 287
G+ QL DA+I+ A + + + + S+ + +P R++
Sbjct: 181 PARGWVHQLRAGCDAVIVGAGTLRADNPLLTSRGGRSPEPLRVV 224
>gi|283784233|ref|YP_003364098.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
gi|282947687|emb|CBG87242.1| riboflavin biosynthesis protein [Citrobacter rodentium ICC168]
Length = 367
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 117/165 (70%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DELYMARALKLAARGRFTTHPNPNVGCVIVKDGEIVGEGYHYRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+H+GRTPPC +ALI A + +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 AKGATAYVTLEPCSHHGRTPPCCDALIAAGMARVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG P+ L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPYVQLKLGASLDGRTAMASGE 167
>gi|166030622|ref|ZP_02233451.1| hypothetical protein DORFOR_00288 [Dorea formicigenerans ATCC
27755]
gi|166029624|gb|EDR48381.1| riboflavin biosynthesis protein RibD [Dorea formicigenerans ATCC
27755]
Length = 377
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 172/323 (53%), Gaps = 36/323 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+R +ELA K G T+PNPMVG VIVKDG+I+GEG+H + G+ HAE A+ E
Sbjct: 5 DQDYMKRAIELAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHARCGELHAERNAIASLTES 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGAT YV+LEPC HYG+TPPCTEA+++ K+KKVV+G DPNP V KG + LRDAG+ V
Sbjct: 65 AEGATLYVTLEPCCHYGKTPPCTEAILEQKIKKVVIGSRDPNPKVAGKGAKILRDAGVAV 124
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ C LN F H I T P+ ++Y ++++G + + G E+ Q
Sbjct: 125 VEDFMRDKCDELNPIFFHYITTKTPYVVMKYAMTLDGKIATKTGASKWITQEAARREVQY 184
Query: 254 LQ-EYDAIILSASSTKKYSIPASQEPDAN-------QPFRIITVSNHASPIRIPGLSEES 305
++ Y I++ + + +P N P RII S +RIP S+
Sbjct: 185 MRHRYMGIMVGIGTV------LADDPMLNVRVEGLKSPVRIIC----DSKLRIPLDSQIV 234
Query: 306 SSK-----VIVFTDGEITVEPD---MGTKGIETVNL----HQLNLKAVLDYCYSHGFCSV 353
S ++ + D E VE + T G+E V +NLK +++Y S+
Sbjct: 235 KSAREYRTIVAYADLE-NVEKKKEILQTMGVEIVFCPDMKKHVNLKHLMEYLGKENIDSI 293
Query: 354 LVDLRGNYGDLEMLLKEGIEQNL 376
L++ G D L+ G+ Q +
Sbjct: 294 LLEGGGTLND--SALRAGVVQEV 314
>gi|407794404|ref|ZP_11141431.1| riboflavin biosynthesis protein RibD [Idiomarina xiamenensis
10-D-4]
gi|407213004|gb|EKE82865.1| riboflavin biosynthesis protein RibD [Idiomarina xiamenensis
10-D-4]
Length = 370
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 124/191 (64%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M +ELA +T+PNP VGCV+VKDG++V EG+H AG+PHAEV AL+ AG
Sbjct: 9 DHKWMLHALELARLGQFTTAPNPNVGCVLVKDGELVAEGWHRCAGEPHAEVHALQAAGGR 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC +ALI+A+V +VVV M DPNP V GL RL+ AGIDV
Sbjct: 69 ARGATAYVTLEPCSHYGRTPPCADALIRAQVARVVVAMEDPNPQVAGAGLARLKAAGIDV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV+ +RLN+ F R+ +P+ ++ S++G GE +GG Q+ +
Sbjct: 129 VSGVQSAAAERLNQGFCARMRRQRPWLRVKLAASLDGATALANGESQWITGGADVQVWRA 188
Query: 257 YDAIILSASST 267
IL+ + T
Sbjct: 189 KSHAILTGADT 199
>gi|373950496|ref|ZP_09610457.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183]
gi|386323668|ref|YP_006019785.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175]
gi|333817813|gb|AEG10479.1| riboflavin biosynthesis protein RibD [Shewanella baltica BA175]
gi|373887096|gb|EHQ15988.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS183]
Length = 384
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR AGE
Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEH 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V
Sbjct: 71 ARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
VG+ + LN F+ R+ +G P T++ S++G
Sbjct: 131 DVGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|420334580|ref|ZP_14836202.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-315]
gi|420378671|ref|ZP_14878170.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 225-75]
gi|391268271|gb|EIQ27199.1| riboflavin biosynthesis protein RibD [Shigella flexneri K-315]
gi|391306904|gb|EIQ64652.1| riboflavin biosynthesis protein RibD [Shigella dysenteriae 225-75]
Length = 361
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 129/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
++LN+ F+ R+ TG P+ L+ S++G GE + Q L+
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRLRAQ 180
Query: 258 DAIILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|226939661|ref|YP_002794734.1| RibD [Laribacter hongkongensis HLHK9]
gi|226714587|gb|ACO73725.1| RibD [Laribacter hongkongensis HLHK9]
Length = 383
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 150/258 (58%), Gaps = 21/258 (8%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD YM R ++LA + ST+PNP VGCV+V DG++ GEG+H +AG PHAE AL AGE
Sbjct: 5 DDHRYMARALQLARLGMTSTAPNPRVGCVVVSDGQVAGEGWHVRAGTPHAERHALAMAGE 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+H+GRTPPC +AL++A V +VV M+DPNP+V +G+ RL AGI+
Sbjct: 65 RARGATAYVTLEPCSHFGRTPPCADALLQAGVGRVVAAMVDPNPLVAGQGMTRLAAAGIE 124
Query: 196 VTVG-VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
G +E E C+ LN F+ R+ G+P+ T++ +S++G G+ +G +
Sbjct: 125 CASGLLEAEACE-LNRGFVSRMTRGRPWLTVKLGISLDGKTALADGQSQWITGAQARADV 183
Query: 255 QEYDA---IILSASSTKKYSIPA----SQEPDANQPFRIITVSNH---ASPIRIPGLSEE 304
A +IL+ S T + P + PD P T + A+P+R P
Sbjct: 184 MRQRACHDVILTGSGTVRADNPQLTVRNLVPDVLPPALQDTPAGRLQAAAPVRQP----- 238
Query: 305 SSSKVIVFTDGEITVEPD 322
+ V DG T++PD
Sbjct: 239 ----LRVIVDGAGTLDPD 252
>gi|160876409|ref|YP_001555725.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195]
gi|378709610|ref|YP_005274504.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS678]
gi|160861931|gb|ABX50465.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS195]
gi|315268599|gb|ADT95452.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS678]
Length = 384
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR AGE
Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPCVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEH 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V
Sbjct: 71 ARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
VG+ + LN F+ R+ +G P T++ S++G
Sbjct: 131 DVGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|407700680|ref|YP_006825467.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Black Sea 11']
gi|407249827|gb|AFT79012.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'Black Sea 11']
Length = 379
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 178/326 (54%), Gaps = 24/326 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDA 133
K+D F+M + ++LA + +TSPNP VGCVIV ++ +++G+G+H +AG PHAEV ALR A
Sbjct: 7 KNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNQLLGQGYHIQAGTPHAEVHALRQA 66
Query: 134 GEL----AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
A+GATAYV+LEPC+H+GRTPPC +AL++A+V +VV+ M DPNP V G+ L
Sbjct: 67 SNARPHGAKGATAYVTLEPCSHFGRTPPCAKALVEAEVARVVIAMTDPNPNVCGNGISLL 126
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
+DAGI+V V LN FI R++TGKPF ++ +S++G + Q G +G
Sbjct: 127 QDAGIEVVSDVMAAESAALNPGFIKRMLTGKPFVRVKLGISLDGKIALQNGVSQWITGAE 186
Query: 250 YSQLLQEYDA---IILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+ +Q+Y A ++L+ S T + P+ + F + + P R+ S+
Sbjct: 187 ARRDVQQYRAQSCVVLTGSGTVQADNPSLLVREKEAQFENYPLDHIRQPARVVVDSKSRL 246
Query: 307 SK-VIVFTDGEIT------VEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
+ +F DG IT PD T+ H L L H S L D +
Sbjct: 247 RRDYTLFNDGNITFTATSQAHPDTATQ-------HYLQLDEKDGKLDLHALMSALGDKQ- 298
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVL 385
Y ++ + G+ LLQ+ +V+ L
Sbjct: 299 -YNEVWVEAGPGLAGALLQEGLVDEL 323
>gi|398901769|ref|ZP_10650560.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM50]
gi|398179380|gb|EJM66992.1| riboflavin biosynthesis protein RibD [Pseudomonas sp. GM50]
Length = 377
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T PNP VGCV+V DG+IVGEG+H + G+PHAEV ALR AG+
Sbjct: 11 DAHYMARALELARKGHYTTHPNPRVGCVVVLDGQIVGEGWHVRTGEPHAEVHALRAAGDK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL+RL AGI
Sbjct: 71 ARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIAT 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + ++LN+ F+ R+ G PF ++ +S++G + GE +G +Q
Sbjct: 131 ESGVLEGEARKLNQGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWITGPAARSAVQR 190
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 191 LRAEASVVLTGADT 204
>gi|62260407|gb|AAX77904.1| unknown protein [synthetic construct]
Length = 390
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 177/324 (54%), Gaps = 20/324 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +YM++ + LA + + SPNPMVGC+IVK+G I+ EG+H G+ HAEV AL A +
Sbjct: 31 DKYYMQQALTLANRGRLTVSPNPMVGCIIVKNGAIISEGWHETVGEAHAEVHALTKAVDK 90
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC H GRTPPCT+ +IKA +KKV++ LDPNP V KG+ERL++AGI V
Sbjct: 91 AKGATAYVTLEPCCHCGRTPPCTDTIIKAGIKKVIIATLDPNPKVAGKGVERLKNAGITV 150
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG--VAESGGYYS--Q 252
VG+ ++ + LN+ F H T KPF ++ +S++G + G+ ++ + + +
Sbjct: 151 EVGLLEKQAQELNKIFFHYQTTKKPFVYAKWAMSLDGKIAVNDGDSKKISSHQAFVNTHE 210
Query: 253 LLQEYDAIILSASSTKKYSIPASQEPDANQ---PFRIITVSNHASPI--RIPGLSEESSS 307
L DAI++ + + + N+ P R I ++NH + I L + +
Sbjct: 211 LRNICDAILIGKQTLIDDNPSLDVRININKIKHPTRFI-LANHLTTINHNWRVLDQRHAK 269
Query: 308 KVIVFTDGEITVEPDMGTKGIETVNL----HQLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
+ V + V + GIE L HQ+ L +L+ G S+LV+ GN
Sbjct: 270 TIFVCSKISARVATKLNQLGIEYWLLPQSQHQVCLDTLLEKMGKIGITSLLVE-GGN--- 325
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPV 387
L I Q L+ + + PV
Sbjct: 326 --KTLNSFINQKLVNEFYTYLAPV 347
>gi|377578766|ref|ZP_09807741.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia hermannii NBRC 105704]
gi|377539849|dbj|GAB52906.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia hermannii NBRC 105704]
Length = 367
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 128/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R ++LA + +TSPNP VGCVIV+DG++VGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEIFMARALKLAQRGRFTTSPNPNVGCVIVRDGEVVGEGFHYRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI V +VV M DPNP V +GL RL+ GI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALIAVGVSRVVAAMQDPNPQVAGRGLYRLKQEGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
+ G+ + LN+ F+ R+ TG PF L+ S++G GE + + +Q
Sbjct: 123 SHGLMMNEAEALNKGFLKRMRTGFPFVQLKLGASLDGRTAMASGESQWITSAESRRDVQR 182
Query: 257 YDA---IILSASST 267
+ A IL++S+T
Sbjct: 183 FRAQSSAILTSSAT 196
>gi|152976519|ref|YP_001376036.1| riboflavin biosynthesis protein RibD [Bacillus cytotoxicus NVH
391-98]
gi|152025271|gb|ABS23041.1| riboflavin biosynthesis protein RibD [Bacillus cytotoxicus NVH
391-98]
Length = 370
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 141/239 (58%), Gaps = 10/239 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM+ ++LA G TSPNPMVG V+VK+GKIVG G H +AG+ HAEV ALR AG
Sbjct: 3 DQEYMKIALQLAQSTAGQTSPNPMVGAVVVKNGKIVGMGAHLRAGEEHAEVHALRMAGAH 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+H+G+TPPC LI+ KVK+VV+ LD NP+V G ++L +AGI V
Sbjct: 63 AKGATVYVTLEPCSHFGKTPPCCNLLIQKKVKRVVIATLDSNPLVAGNGKKKLEEAGIYV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
T G+ +E + LN F H + T +PF TL+ +S++G + GE +G +
Sbjct: 123 TTGILEEEARSLNRYFFHYMKTKRPFVTLKTAMSLDGKIATTTGESKWITGDAARDDVHH 182
Query: 257 Y----DAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKV 309
Y DAI++ ++ S+ P RII + H +R P LS + +V
Sbjct: 183 YRHTHDAILVGVNTIIADNPSLTTRLPNGGKNPIRII-LDTH---LRTPLLSHVVTDRV 237
>gi|354722287|ref|ZP_09036502.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Enterobacter mori LMG 25706]
Length = 367
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 140/238 (58%), Gaps = 19/238 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVK+G+IVGEG+H +AG+PHAEV ALR AGE
Sbjct: 3 DEMYMARAMKLAQRGRFTTHPNPNVGCVIVKEGEIVGEGYHLRAGEPHAEVHALRMAGEK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL+ GIDV
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVASMQDPNPQVAGRGLYRLQQEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + + +N+ F+ R+ TG P+ L+ S++G GE + Q
Sbjct: 123 SHGLMMQDAEAINKGFLKRMRTGFPYIQLKLGASLDGRTAMANGESQWITSPQARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASP 295
L+ IL++S T PA + P N QP RII S N +P
Sbjct: 183 LRAQSHAILTSSETVLADDPAMTVRWDELSADTQALYPQENLRQPLRIIIDSQNRVTP 240
>gi|228992853|ref|ZP_04152778.1| RibD (Riboflavin-specific deaminase) [Bacillus pseudomycoides DSM
12442]
gi|228766902|gb|EEM15540.1| RibD (Riboflavin-specific deaminase) [Bacillus pseudomycoides DSM
12442]
Length = 373
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 142/241 (58%), Gaps = 6/241 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR ++LA G TSPNPMVG V+VKDG IVG G H AG+ HAEV ALR AG+
Sbjct: 6 DQEYMRIALQLAQSTAGQTSPNPMVGAVVVKDGNIVGMGAHLLAGEEHAEVHALRMAGDK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A G+T YV+LEPC+H+G+TPPC + LI+ KVK+VV+ LD NP+V+ G +RL+ AGI V
Sbjct: 66 ANGSTVYVTLEPCSHFGKTPPCCDLLIEKKVKRVVIATLDCNPLVSGSGAKRLQKAGISV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
T GV +E LN F H + T PF T++ +S++G + GE +G + +
Sbjct: 126 TTGVLEEEATALNRYFFHYMKTKLPFVTIKTAMSLDGKIATTTGESKWITGEVARTDVHQ 185
Query: 257 Y----DAIILSASST--KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
Y DAI++ ++ S+ P RII ++ +P+ +++E + I
Sbjct: 186 YRHTHDAILIGVNTVIADNPSLTTRLPNGGKHPIRIILDTHLRTPLSSHVITDEMAPTWI 245
Query: 311 V 311
+
Sbjct: 246 I 246
>gi|223041905|ref|ZP_03612090.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
gi|223017259|gb|EEF15686.1| riboflavin biosynthesis protein [Actinobacillus minor 202]
Length = 364
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 143/242 (59%), Gaps = 5/242 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R + LA KA G T+PNP+VGCVIVK+ +I+ EG+H + G HAE A+ ++
Sbjct: 3 DFDYMARAIALAEKARGWTNPNPLVGCVIVKNDEILAEGYHERIGGWHAERNAILNSSAD 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
GATAYV+LEPC H+GRTPPC++ LI+ + KV +G DPNP+V+ KG+++L+DAGI+V
Sbjct: 63 LRGATAYVTLEPCCHHGRTPPCSDLLIERGISKVFIGSRDPNPLVSGKGVKQLQDAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
E C RLN F H I T +P+ L+Y ++ +G + GE +G +QE
Sbjct: 123 VTDFMREECDRLNPIFFHYIQTKRPYVLLKYAMTADGKIATSTGESKWITGELARAKVQE 182
Query: 257 ----YDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
Y AI++ + + S+ P+A QP RI+ S+ +P+ + + I+
Sbjct: 183 TRHQYSAIMVGVETVLADNPMLNSRMPNAKQPVRIVCDSSLRTPLDCQLVQTAKEYRTII 242
Query: 312 FT 313
T
Sbjct: 243 AT 244
>gi|421837452|ref|ZP_16271631.1| riboflavin biosynthesis protein RibD, partial [Clostridium
botulinum CFSAN001627]
gi|409740403|gb|EKN40680.1| riboflavin biosynthesis protein RibD, partial [Clostridium
botulinum CFSAN001627]
Length = 205
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 117/167 (70%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+D FYM + ++LA + G +PNP VG ++VK+ KI+GEG+H G PHAEV+ALR+AG
Sbjct: 2 EDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A+GAT YV+LEPC+HYG+TPPC E+++K + K ++ M DPNP+V +G++ L+ GI
Sbjct: 62 EKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+V G+ ++ K+LNE FI I KPF L+ +++G + + GE
Sbjct: 122 EVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATKTGE 168
>gi|313889107|ref|ZP_07822763.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312844847|gb|EFR32252.1| riboflavin biosynthesis protein RibD [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 371
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 182/336 (54%), Gaps = 22/336 (6%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D +D FYM R +E+A + G T NP+VGCVIVKD KI+G+G H K G+ HAEV A+ DA
Sbjct: 5 DFNDIFYMERALEIAREGTGKTKTNPLVGCVIVKDDKIIGQGAHLKFGENHAEVNAILDA 64
Query: 134 ---GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLR 190
GE GAT YV+LEPC+HYG+TPPC E ++K +++VV+G DP V+ +G++ L
Sbjct: 65 KSRGEDIRGATLYVNLEPCSHYGKTPPCAERIVKEGIRRVVIGTADPFEKVSGRGIKILE 124
Query: 191 DAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAE-S 246
DAGI VT G+ +E C LNE F + +PF L+ +S++G + + GE +E S
Sbjct: 125 DAGISVTEGLCEEECLNLNERFFTYLKNKRPFVVLKSGMSLDGKIATESGESKWITSEFS 184
Query: 247 GGYYSQLLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEE 304
+ +L + DAI++ + S+ N P RIIT S+ P+ L ++
Sbjct: 185 RAHGHELRGQLDAIMVGIGTVLADDPSLNTRHCKYKNNPIRIITDSSLRIPLDAKVLRDD 244
Query: 305 SSSKVIVFTDGEITVEPDMGTKGIETVNL-------HQLNLKAVLDYCYSHGFCSVLVDL 357
S I+ T + K ++ V + +++LK +++ + S+L++
Sbjct: 245 LDSIAIIATTESCDKDKLEKLKAMKNVEVIICKEKDKRVDLKDLMEKLKDYDISSILLE- 303
Query: 358 RGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
G + EML + NL+ K + P+ GS G
Sbjct: 304 GGRTLNAEML-----KNNLVDKFYFFIAPILLGSKG 334
>gi|407692605|ref|YP_006817394.1| riboflavin biosynthesis protein [Actinobacillus suis H91-0380]
gi|407388662|gb|AFU19155.1| riboflavin biosynthesis protein [Actinobacillus suis H91-0380]
Length = 361
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 139/239 (58%), Gaps = 5/239 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCV+VK+G+IV EG+H K G HAE A+ E G
Sbjct: 6 YMRRAIALAKQGLGWTNPNPLVGCVVVKNGEIVAEGYHEKIGGWHAERNAILHCKEDLSG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 66 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGAGQLRQAGVEVVEG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 126 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATSTGESKWITGESARARVQQTRH 185
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
+Y AI++ + + S+ P+A QP RI+ S +P+ + + ++ T
Sbjct: 186 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPLDCQLVQTAKEYRTVIAT 244
>gi|320540315|ref|ZP_08039967.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Serratia symbiotica str. Tucson]
gi|320029635|gb|EFW11662.1| fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and
5-amino-6-(5-phosphoribosylamino) uracil reductase
[Serratia symbiotica str. Tucson]
Length = 371
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/240 (44%), Positives = 141/240 (58%), Gaps = 19/240 (7%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D FYM R +LA +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV AL AG
Sbjct: 2 QSDVFYMARAFKLARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALCMAG 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
E A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL +L+ AGI
Sbjct: 62 EKARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVTAMQDPNPQVAGRGLYQLQQAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+V G+ + +N F+ R+ TG P+ L+ +S++G GE +
Sbjct: 122 EVCHGLMLAEAEAVNPGFLKRMRTGFPYVQLKLAVSLDGRTAMASGESQWITSSQARQDV 181
Query: 252 QLLQEYDAIILSASSTKKYSIPA-------------SQEPDAN--QPFRIITVS-NHASP 295
Q L+ A ILS S+T PA S P N QP+RII S N +P
Sbjct: 182 QRLRAQSAAILSTSATVLADDPALTVRWDELDAETQSLYPQENLRQPWRIILDSQNRVTP 241
>gi|418025467|ref|ZP_12664445.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS625]
gi|353535079|gb|EHC04643.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS625]
Length = 384
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR AGE
Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEH 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V
Sbjct: 71 ARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
VG+ + LN F+ R+ +G P T++ S++G
Sbjct: 131 DVGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|212709165|ref|ZP_03317293.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM
30120]
gi|212688077|gb|EEB47605.1| hypothetical protein PROVALCAL_00198 [Providencia alcalifaciens DSM
30120]
Length = 371
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 3/203 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D YM R ELA + +TSPNP VGCVIV+DG+IVGEG+H KAG+PHAEV ALR AG
Sbjct: 3 EQDRIYMARAFELAKEGRFTTSPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMAG 62
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A+GATAYV+LEPC+H+GRTPPC EALI A + +VV M DPNP V +GL L AGI
Sbjct: 63 DKAKGATAYVTLEPCSHHGRTPPCAEALINAGISRVVAAMQDPNPQVAGRGLYMLNQAGI 122
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
+ + E + LN F+ R+ T P+ L+ S++G GE + +
Sbjct: 123 ETASNILLEEAEALNRGFLKRMRTAFPYIQLKLAASLDGKTALANGESKWITSPAARKDV 182
Query: 252 QLLQEYDAIILSASSTKKYSIPA 274
Q+L+ + ILS S+T PA
Sbjct: 183 QVLRAQASAILSTSNTVLADDPA 205
>gi|317497909|ref|ZP_07956219.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894890|gb|EFV17062.1| riboflavin biosynthesis protein RibD [Lachnospiraceae bacterium
5_1_63FAA]
Length = 366
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 189/369 (51%), Gaps = 39/369 (10%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR +ELA K G T+PNP+VG VIVKD K++GEG+H K G HAE AL++ E +G
Sbjct: 5 YMRRAIELAKKGCGYTNPNPLVGAVIVKDQKVIGEGYHEKIGGLHAERNALKNCIEDPKG 64
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
A YV+LEPC HYG+TPPCTEALI+A +KKV VG LDPNP V G++ L D GI+ G
Sbjct: 65 AEIYVTLEPCCHYGKTPPCTEALIEAGIKKVYVGNLDPNPKVAGGGIKILNDHGIETETG 124
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
+ +E C++LN+ F H I P+ L+Y ++++G + GE E + L+
Sbjct: 125 ILEEECRQLNDIFFHYIQNDIPYTALKYAMTLDGKIATATGESKWITGEEARRHVHTLRH 184
Query: 257 YDAIILSASSTKKYSIPA--SQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
A I++ T P ++ N P R+I SN +RI S IV T
Sbjct: 185 QYAAIMAGIGTVLADDPMLNARIEHGNDPIRVICDSN----LRI------SEGSNIVKTA 234
Query: 315 GEI-----TVEPD------MGTKGIETVNLHQ----LNLKAVLDYCYSHGFCSVLVDLRG 359
EI T+ D + KG + + + +N+K VL + SVLV+ G
Sbjct: 235 REIPTIIATISKDQEKIAKLEQKGCKILKTSEQDGKVNVKEVLKQLRNMEIDSVLVEGGG 294
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDGGNP--HTLLNSLGKRLILKNLQPKM 416
+L + I+ + + K+ + P ++ G P + + + L+ L+
Sbjct: 295 ------ILNESLIKNDCVHKVYAYIAPKLFGGEKAKTPVEGKGIERIQEALVFDELKATP 348
Query: 417 SSQSIVLEG 425
I+LEG
Sbjct: 349 LGNDILLEG 357
>gi|126207866|ref|YP_001053091.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|1173516|gb|AAA86522.1| riboflavin-specific deaminase [Actinobacillus pleuropneumoniae]
gi|126096658|gb|ABN73486.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
Length = 410
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 52 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLSG 111
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 112 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEVVEG 171
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 172 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGSGESKWITGESARARVQQTRH 231
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + S+ P+A QP RI+ S +P+
Sbjct: 232 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPL 273
>gi|447918540|ref|YP_007399108.1| riboflavin biosynthesis protein RibD [Pseudomonas poae RE*1-1-14]
gi|445202403|gb|AGE27612.1| riboflavin biosynthesis protein RibD [Pseudomonas poae RE*1-1-14]
Length = 375
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG+IVGEG+H + G+PHAE ALR AG
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGSK 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRTPPC +AL+ A V +VV GM DPNP V +G++RL AGI+V
Sbjct: 69 ARGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 129 RSGVLEAEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 188
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 189 LRAQASVVLTGADT 202
>gi|262370188|ref|ZP_06063515.1| pyrimidine deaminase [Acinetobacter johnsonii SH046]
gi|262315227|gb|EEY96267.1| pyrimidine deaminase [Acinetobacter johnsonii SH046]
Length = 367
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 122/184 (66%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M++ + LA + ST PNP VGCVIVKDG ++G G+HP+AGQ HAEVFA+R+AGE
Sbjct: 12 DQAWMKQAIALALQGQYSTKPNPNVGCVIVKDGLLLGTGYHPQAGQLHAEVFAMREAGEQ 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
+GATAYV+LEPC HYGRTPPC + L++A V +VV+ DPNP+V KG++ L++AGI+V
Sbjct: 72 TQGATAYVTLEPCAHYGRTPPCAKGLVEAGVARVVIACPDPNPLVAGKGVQILKEAGIEV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ +LN F+ + TG P+ L+ S++G GE +G +Q
Sbjct: 132 DVGICQTEAHQLNAGFLKAMATGMPYVRLKVASSLDGRTAMASGESKWITGPAARLDVQH 191
Query: 257 YDAI 260
+ AI
Sbjct: 192 FRAI 195
>gi|115377134|ref|ZP_01464348.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
DW4/3-1]
gi|310822848|ref|YP_003955206.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
DW4/3-1]
gi|115365843|gb|EAU64864.1| riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
DW4/3-1]
gi|309395920|gb|ADO73379.1| Riboflavin biosynthesis protein RibD [Stigmatella aurantiaca
DW4/3-1]
Length = 387
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 163/299 (54%), Gaps = 29/299 (9%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
F+MR +E A K +G TSPNP VG V+VK G+I+ G+H KAG HAEV AL AG A
Sbjct: 30 FFMRIALEEAAKGLGRTSPNPAVGAVLVKGGRIIARGYHKKAGTAHAEVVALEAAGPRAR 89
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GA Y +LEPC+HYGRT PC++A+I A V++V+ G DPNP VN KG+ RL+ AG++V
Sbjct: 90 GADLYTTLEPCDHYGRTGPCSQAIIDAGVRRVICGSSDPNPKVNGKGVARLKKAGVEVLT 149
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQLL 254
GV + +LN+ F + TG P+ TL+ ++++G + G+ +G + QL
Sbjct: 150 GVLQKDADQLNQPFFKVMTTGLPYVTLKAAVTLDGKLATATGDSRWVTGEAARHWVHQLR 209
Query: 255 QEYDAIILSASSTKK------YSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
+ D I++ A++ ++ +P D P R++ S+ ++ S ++
Sbjct: 210 DKVDVILVGANTVRRDNPQLTTRLPGGGGKD---PVRVVVDSHLRLKSTHTVFTQRSPAR 266
Query: 309 VIVFTDGEITVEPDMGTK-------GIETVNL----HQLNLKAVLDYCYSHGFCSVLVD 356
VI+ T+E G K G+E + Q+ LKA+L GF VLV+
Sbjct: 267 VIL-----ATLEDPQGAKARRFTRLGVEVWQMPSRQGQVALKALLGRVAQEGFNHVLVE 320
>gi|440737909|ref|ZP_20917460.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
BRIP34879]
gi|440381648|gb|ELQ18174.1| riboflavin biosynthesis protein RibD [Pseudomonas fluorescens
BRIP34879]
Length = 375
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K + +T PNP VGCVIV+DG+IVGEG+H + G+PHAE ALR AG
Sbjct: 9 DAHYMARALELARKGLYTTHPNPRVGCVIVRDGQIVGEGWHERTGEPHAEPNALRAAGSK 68
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRTPPC +AL+ A V +VV GM DPNP V +G++RL AGI+V
Sbjct: 69 ARGATVYVTLEPCSHHGRTPPCADALVTAGVARVVAGMQDPNPEVAGRGMQRLAQAGIEV 128
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 129 RSGVLETEARALNPGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 188
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 189 LRAQASVVLTGADT 202
>gi|329298304|ref|ZP_08255640.1| riboflavin biosynthesis protein RibD [Plautia stali symbiont]
Length = 367
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV+DG+IVGEG+H +AG+PHAEV ALR AG+
Sbjct: 3 DAHYMARALELARRGQYTTTPNPNVGCVIVRDGEIVGEGWHQRAGEPHAEVHALRMAGDH 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ACGATAYVTLEPCSHHGRTPPCCDALIAAGVSRVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN F+ R+ T P+ L+ S++G GE + + Q
Sbjct: 123 SHGLMMNEAEALNRGFLKRMRTSFPWIQLKLGASLDGRTAMASGESQWITSAAARRDVQR 182
Query: 254 LQEYDAIILSASST 267
L+ + IL+ S+T
Sbjct: 183 LRARSSAILTTSAT 196
>gi|403380823|ref|ZP_10922880.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. JC66]
Length = 366
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 148/268 (55%), Gaps = 30/268 (11%)
Query: 73 NDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRD 132
N + YMR +ELA A G T NPMVGCVIV+DG+IVG G H + G HAEV A+R
Sbjct: 2 NKLTEETYMRLALELAKGAQGQTGVNPMVGCVIVRDGRIVGTGAHLRMGSAHAEVHAIRM 61
Query: 133 AGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDA 192
AG+ AEG+T YV+LEPC+H+GRTPPC E LI ++V KVVV DPNP V G+ RLR+A
Sbjct: 62 AGDEAEGSTVYVTLEPCSHHGRTPPCCELLIASRVAKVVVAATDPNPQVAGSGISRLREA 121
Query: 193 GIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGG 248
GI+V VG+ ++ + LNE F IVTG PF TL+ +++G + + G+ S
Sbjct: 122 GIEVAVGLLEQEARELNEVFNKYIVTGLPFVTLKTASTLDGKIASKSGDSRWITNEASRE 181
Query: 249 YYSQLLQEYDAIILSA--------SSTKKYSIPASQEPDANQPFRIITVSNHASP----- 295
+ L + AI++ S T + +PA P R+I S +P
Sbjct: 182 FVHTLRHRHQAIMVGVGTVLADNPSLTTRLPVPAL------DPLRVIIDSRLRTPPDARV 235
Query: 296 IRIPGLSEESSSKVIVFTDGEITVEPDM 323
+ PG + ++ T E VE M
Sbjct: 236 LHKPG-------RALIITTEEAAVERRM 256
>gi|393762569|ref|ZP_10351196.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella agri BL06]
gi|392606804|gb|EIW89688.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Alishewanella agri BL06]
Length = 382
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
+ D +MRR + LA + +T PNP VG ++VKDG+++GEGFH +AG PHAEVFAL+ AG
Sbjct: 5 QADHAFMRRALALAAQGRFTTDPNPNVGALVVKDGQVLGEGFHQQAGGPHAEVFALQQAG 64
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
A GAT YV+LEPC HYGRTPPC EAL+KA V +VV+ MLDPNP+V KG+ L+ AGI
Sbjct: 65 SAARGATCYVTLEPCAHYGRTPPCAEALVKAGVARVVIAMLDPNPLVAGKGVAILQQAGI 124
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYS 251
V G+ E + LN F+ R+ +P+ L+ S++G G+ ++
Sbjct: 125 SVAHGLLTEEARALNPGFLSRMERQRPYLYLKLAASLDGRTALANGQSQWLTSDVARADV 184
Query: 252 QLLQEYDAIILSASS---------TKKYSIPASQEPDA----------NQPFRII 287
QL + + ILS +S T + S A EP A QP R+I
Sbjct: 185 QLWRAQVSAILSTASTVLADAARLTVRQSSDAGAEPAALIRPLADGSLRQPLRVI 239
>gi|334136630|ref|ZP_08510090.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF7]
gi|333605829|gb|EGL17183.1| riboflavin biosynthesis protein RibD [Paenibacillus sp. HGF7]
Length = 379
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 190/374 (50%), Gaps = 39/374 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR +++A A+G T NP+VGCV+VKDG+IVG G H K G+ HAEV AL+ AG
Sbjct: 7 DESYMRLALQMAQAALGQTGINPVVGCVVVKDGRIVGMGAHLKRGEGHAEVHALKMAGRE 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AEGATAYV+LEPC+HYG+TPPC++ LI++ +++VVV +DPNP+V G+ RLR GIDV
Sbjct: 67 AEGATAYVTLEPCSHYGKTPPCSDRLIESGIRRVVVAAVDPNPLVAGSGIARLRSRGIDV 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL-- 254
G+ + LNEAF IVT PF T++ +++G + + G+ +G +L+
Sbjct: 127 EAGLLADEANALNEAFGKFIVTRLPFVTMKSASTLDGKIAAKTGDSKWITGAPARELVHA 186
Query: 255 --QEYDAIILSASS--------TKKYSIPASQEPDANQPFRIITVSNHASPI--RIPGLS 302
+ AI++ + T + S+PA P RI+ S +P+ R+
Sbjct: 187 MRHRHAAIMVGIGTVLADDPELTTRLSVPAL------HPLRIVVDSQLRTPLSARVLRQQ 240
Query: 303 EESSSKVIVFTDGEITVEPDMGTKGIETVNLH---QLNLKAVLDYCYSHGFCSVLVDLRG 359
+E + ++ D + + G E + ++L + SVL++ G
Sbjct: 241 DERPTLILTTADADPAKREALEALGAEVLACGSGPHVDLPLAMRLLGEREVPSVLLEGGG 300
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLLNS-------LGKRLILKNL 412
L +E L+ K V+ P W GG P N+ + + + L +
Sbjct: 301 R------LSGAMLENRLVDKAVLFFAPKWI---GGGPEAPDNAAFAGFGRMSEAIRLARM 351
Query: 413 QPKMSSQSIVLEGY 426
+ + + L GY
Sbjct: 352 TVETVGEDVCLTGY 365
>gi|311030745|ref|ZP_07708835.1| riboflavin biosynthesis protein RibD [Bacillus sp. m3-13]
Length = 367
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/243 (40%), Positives = 149/243 (61%), Gaps = 7/243 (2%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG- 134
DD +YM+ ++LA +A G TSPNP+VG V+VK+G+IVG G H +AG+ HAEV A++ AG
Sbjct: 2 DDQYYMKFAIDLAKRATGQTSPNPVVGSVVVKNGEIVGFGAHLRAGEAHAEVNAIQMAGV 61
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A G+T YV+LEPC+H+G+TPPC++ LI+++V +VV+ DPNP+V +G+E+LR AGI
Sbjct: 62 DKANGSTVYVTLEPCSHFGKTPPCSDLLIQSQVSRVVIASTDPNPLVAGRGIEKLRKAGI 121
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YY 250
+V +GV +E LN+ F H I TGKPF TL+ S++G E +G
Sbjct: 122 EVELGVCEEEALALNQVFFHHIKTGKPFVTLKTAASLDGKTATHRNESKWITGPDSRLDV 181
Query: 251 SQLLQEYDAIILSASS--TKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
Q ++DAI++ + S+ P RII S+ +P+ L++ +
Sbjct: 182 HQYRHQHDAILVGVGTVLADDPSLDTRLPNGGKNPIRIILDSHLRTPLDSKVLTDGKAPT 241
Query: 309 VIV 311
IV
Sbjct: 242 WIV 244
>gi|419344058|ref|ZP_13885442.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13A]
gi|419348491|ref|ZP_13889844.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13B]
gi|419928028|ref|ZP_14445748.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-1]
gi|378190557|gb|EHX51141.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13A]
gi|378204153|gb|EHX64569.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC13B]
gi|388406279|gb|EIL66685.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 541-1]
Length = 361
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA- 259
++LN+ F+ R+ TG P+ L+ S++G GE + + +Q A
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQRAQ 180
Query: 260 --IILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|425276287|ref|ZP_18667631.1| riboflavin biosynthesis protein RibD [Escherichia coli ARS4.2123]
gi|408207199|gb|EKI31953.1| riboflavin biosynthesis protein RibD [Escherichia coli ARS4.2123]
Length = 361
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 129/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
++LN+ F+ R+ TG P+ L+ S++G GE + Q L+
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMTSGESQWITSPQARRDVQRLRAQ 180
Query: 258 DAIILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|269103255|ref|ZP_06155952.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163153|gb|EEZ41649.1| diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 378
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 130/213 (61%), Gaps = 3/213 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R + LA K +T+PNP VGCVIV +G+IVGEGFH +AG PHAEVFALR AG+
Sbjct: 6 DHKMMSRAIALAKKGRFTTAPNPNVGCVIVNNGQIVGEGFHYRAGLPHAEVFALRAAGDK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI+A + +VV M+DPNP V G+ L++AG+ V
Sbjct: 66 ARGATAYVTLEPCSHYGRTPPCALALIEAGISRVVCAMVDPNPKVAGNGVTLLQNAGVTV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ ++ K LN FI + TG P+ L+ S++G GE +G +Q
Sbjct: 126 EVGLLEQDAKALNLGFIKAMQTGMPYVQLKMASSLDGRTALANGESKWITGPQARADVQH 185
Query: 257 YDA---IILSASSTKKYSIPASQEPDANQPFRI 286
+ A ILS S+T P+ PF I
Sbjct: 186 FRAQAGAILSTSATVIADDPSMNIRWQELPFYI 218
>gi|153001671|ref|YP_001367352.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185]
gi|151366289|gb|ABS09289.1| riboflavin biosynthesis protein RibD [Shewanella baltica OS185]
Length = 384
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 112/157 (71%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D M R ++LA K +T PNP VGCVIVKD +IVGEG+H KAG+PHAEV ALR AGE
Sbjct: 11 DTQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRMAGEH 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V
Sbjct: 71 ARGATAYVTLEPCSHYGRTPPCAFALINIGVKRVVVAVEDPNPQVAGRGIQMLRDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
VG+ + LN F+ R+ +G P T++ S++G
Sbjct: 131 DVGLHRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|375310480|ref|ZP_09775751.1| riboflavin biosynthesis protein ribD [Paenibacillus sp. Aloe-11]
gi|375077629|gb|EHS55866.1| riboflavin biosynthesis protein ribD [Paenibacillus sp. Aloe-11]
Length = 369
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 178/318 (55%), Gaps = 17/318 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM +E A A G T PNP+VG VIV +G+IVG G H K G+PHAE+ ALR AGE A G
Sbjct: 10 YMHLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMAGEHARG 69
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+H+GRT PC EA++KA +++VV+ LDPNP+V+ +G++ L+DAGI+V VG
Sbjct: 70 ATIYVTLEPCSHHGRTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQILKDAGIEVIVG 129
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
V ++ R+NE F IV+ +PF T++ ++++G + + E +E+ L+
Sbjct: 130 VCEQESIRMNEVFNRYIVSKRPFITIKSAVTLDGKIATRTSESKWITSEAAREDVHRLRH 189
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI---- 310
IL T + P ++ P+ P RII S P+ +++ + I
Sbjct: 190 EHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSTLRIPLDARVITDGEAPTWIFTGR 249
Query: 311 VFTDGEITVEPDMGTKGIET--VNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
+ + + + +G K T N ++NL +LD + SV V+ G E +
Sbjct: 250 AYDEAKRSQLEQLGVKVYPTQDANSDRVNLPQMLDILGAAEVSSVFVE-----GGAE-VN 303
Query: 369 KEGIEQNLLQKIVVEVLP 386
++Q+L K+V+ + P
Sbjct: 304 ASFVQQDLADKLVLYIAP 321
>gi|407716845|ref|YP_006838125.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cycloclasticus sp. P1]
gi|407257181|gb|AFT67622.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Cycloclasticus sp. P1]
Length = 370
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 193/356 (54%), Gaps = 35/356 (9%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M R +ELA ST PNP VGCVIV +G ++ EG+H KAG+PHAEV+AL+ A
Sbjct: 6 DDQRHMNRALELAALGRYSTKPNPCVGCVIVDEGHVIAEGWHKKAGEPHAEVYALQSAAA 65
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GATAYV+LEPC+H+GRTPPC + LI A V +VV+ M DPNPIV+ +G+ +L+ AGI+
Sbjct: 66 AAKGATAYVTLEPCSHHGRTPPCADGLINAGVSRVVIAMQDPNPIVSGQGVAKLQAAGIE 125
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY----YS 251
V VG+ +E LN+AF HR+ TG+P+ + +S++G GE +G
Sbjct: 126 VAVGLFEEQAIALNQAFYHRMTTGQPYIFSKVAMSLDGKTAMASGESQWITGAAARKDVH 185
Query: 252 QLLQEYDAIILSASSTKKYSIPASQEPDA------NQPFRIITVSNHASPIRIPGLSEES 305
QL E D I+L+ T P D QP R+I S +P+ +S
Sbjct: 186 QLRAESD-IVLTGVGTILADDPQLTARDGLEHIAVEQPHRVILDSQLKTPVNARIF--KS 242
Query: 306 SSKVIVFT-----DGEITVEPDMGTKGIETVNLH-QLNLKAVLDYCYSHGFCSVLVD--- 356
+ KV + T D ++ T + + Q++L AV ++ S SV+V+
Sbjct: 243 NVKVTILTCSNNQDAMTALQQAGCTVQVIAADAQGQVDLYAVHEWLRSQDINSVMVEAGA 302
Query: 357 -LRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL--LNSLGKRLIL 409
L G LL+ GI + ++++ + P GSD ++ +++L R+ L
Sbjct: 303 LLNG------ALLQAGI----IDELIIYMAPSALGSDARGAFSMPQVSTLSDRVQL 348
>gi|8039802|sp|P50853.2|RIBD_ACTPL RecName: Full=Riboflavin biosynthesis protein RibD; Includes:
RecName:
Full=Diaminohydroxyphosphoribosylaminopyrimidine
deaminase; Short=DRAP deaminase; AltName:
Full=Riboflavin-specific deaminase; Includes: RecName:
Full=5-amino-6-(5-phosphoribosylamino)uracil reductase;
AltName: Full=HTP reductase
Length = 376
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 18 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLSG 77
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 78 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEVVEG 137
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 138 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGSGESKWITGESARARVQQTRH 197
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + S+ P+A QP RI+ S +P+
Sbjct: 198 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPL 239
>gi|46143613|ref|ZP_00134868.2| COG1985: Pyrimidine reductase, riboflavin biosynthesis
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307247384|ref|ZP_07529431.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307260857|ref|ZP_07542543.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306856081|gb|EFM88237.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306869424|gb|EFN01215.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 364
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 6 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLSG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 66 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEVVEG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 126 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGSGESKWITGESARARVQQTRH 185
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + S+ P+A QP RI+ S +P+
Sbjct: 186 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPL 227
>gi|386314619|ref|YP_006010784.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase, RibD [Shewanella putrefaciens 200]
gi|319427244|gb|ADV55318.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase, RibD [Shewanella putrefaciens 200]
Length = 384
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 111/153 (72%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA K +T PNP VGCVIVKD +I+GEG+H KAG+PHAEV ALR AGE A GA
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGEPHAEVHALRMAGERARGA 74
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V VG+
Sbjct: 75 TAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVDVGL 134
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
+ LN F+ R+ +G P T++ S++G
Sbjct: 135 HRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|415821067|ref|ZP_11510081.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1180]
gi|417637713|ref|ZP_12287888.1| riboflavin biosynthesis protein RibD [Escherichia coli TX1999]
gi|419379296|ref|ZP_13920277.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14C]
gi|419948951|ref|ZP_14465214.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli CUMT8]
gi|323178323|gb|EFZ63901.1| riboflavin biosynthesis protein RibD [Escherichia coli OK1180]
gi|345395457|gb|EGX25201.1| riboflavin biosynthesis protein RibD [Escherichia coli TX1999]
gi|378234441|gb|EHX94519.1| riboflavin biosynthesis protein RibD [Escherichia coli DEC14C]
gi|388420483|gb|EIL80175.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli CUMT8]
Length = 361
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA- 259
++LN+ F+ R+ TG P+ L+ S++G GE + + +Q A
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQRAQ 180
Query: 260 --IILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|386708213|ref|YP_006171934.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli W]
gi|383403905|gb|AFH10148.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli W]
Length = 361
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA- 259
++LN+ F+ R+ TG P+ L+ S++G GE + + +Q A
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQRAQ 180
Query: 260 --IILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|349608728|ref|ZP_08888151.1| riboflavin biosynthesis protein RibD [Neisseria sp. GT4A_CT1]
gi|348611585|gb|EGY61229.1| riboflavin biosynthesis protein RibD [Neisseria sp. GT4A_CT1]
Length = 357
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 164/320 (51%), Gaps = 22/320 (6%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M+ + LA STSPNP VGCVI +IVG+GFH KAG+PHAEV ALR AGE+A GA
Sbjct: 2 MQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQAGEMARGA 61
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC EALI + V +VV M DPNP+V KGL L AGI G+
Sbjct: 62 TAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEAAGIRTESGL 121
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-----VAESGGYYSQLLQ 255
+ + LN F+ RI G+PF ++ S++G L +G E+ Q L+
Sbjct: 122 LETEARELNRGFLSRIERGRPFVRIKCAASLDGKT--ALADGRSYWITGEAARADVQTLR 179
Query: 256 EYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV- 311
+L+ T P P QP RI+ S +P+ +S++ S VIV
Sbjct: 180 AESCAVLTGIGTVLADNPRLNVRAFPTLRQPARIVLDSKLQTPLGSHIISDDLSPTVIVT 239
Query: 312 FTDGEITVEPDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
D E ++P I + + ++L A+L G+ ++V+
Sbjct: 240 AVDDEERLKPYRAFSHIRILRSSENANGRIDLAALLPQLAELGYGEIMVEAGAT------ 293
Query: 367 LLKEGIEQNLLQKIVVEVLP 386
L IE L +IV+ P
Sbjct: 294 LTSAFIESGLADEIVLYQAP 313
>gi|114331089|ref|YP_747311.1| riboflavin biosynthesis protein RibD [Nitrosomonas eutropha C91]
gi|114308103|gb|ABI59346.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase /
diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Nitrosomonas eutropha C91]
Length = 367
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 170/291 (58%), Gaps = 13/291 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M ++LA + + +TSPNP VGCVIV DGK+VG G+H + G+ HAE+ ALR+AG+L
Sbjct: 10 DYMHMSHALQLAERGLFTTSPNPRVGCVIVNDGKVVGTGWHERVGESHAEINALREAGDL 69
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC+H+GRTPPC EALI A+V +V++ M DPNP VN +G E+L+ AG++V
Sbjct: 70 ARGATVYVTLEPCSHHGRTPPCVEALICAEVCRVIMAMDDPNPHVNGQGKEKLQKAGVEV 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ ++ ++LN FI R+ +P+ + S++G + + G+ +G Q
Sbjct: 130 QTGLLEDEAQQLNIGFITRMHHSRPWIRTKIAASLDGRIALKNGKSQWITGEPARQDGHR 189
Query: 257 YDA---IILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
+ A IL+ ++ K P + QP RI+ SN P++ L E++
Sbjct: 190 WRARSCAILTGVNSVKVDDPLLTVRYIETSRQPIRIVLDSNLEIPLQAKLL--ENADTTW 247
Query: 311 VFT----DGEITVEPDMGTKGIETVNLH-QLNLKAVLDYCYSHGFCSVLVD 356
+FT G+I + D G + +L +++LKA++ G +LV+
Sbjct: 248 IFTVQADRGKIHLLEDAGAHVVVLPDLAGKVDLKAMITKLAELGINELLVE 298
>gi|307262983|ref|ZP_07544605.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306871609|gb|EFN03331.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 364
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 6 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLSG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 66 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEVVEG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 126 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGSGESKWITGESARARVQQTRH 185
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + S+ P+A QP RI+ S +P+
Sbjct: 186 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPL 227
>gi|150016108|ref|YP_001308362.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii
NCIMB 8052]
gi|149902573|gb|ABR33406.1| riboflavin biosynthesis protein RibD [Clostridium beijerinckii
NCIMB 8052]
Length = 361
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 193/364 (53%), Gaps = 19/364 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM +ELA + +G +PNP+VG VIVKD +I+GEG+H G+ HAE A+++A +
Sbjct: 2 DEKYMEIALELAKRGIGKVNPNPLVGAVIVKDNEIIGEGYHECYGEAHAERNAVKNATKS 61
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
E +T YV+LEPC HYG+TPPC + +I+ K K+VV+GMLDPN +V+ K +E+L+ GI+V
Sbjct: 62 VEESTIYVTLEPCAHYGKTPPCVDLIIEKKFKRVVIGMLDPNELVSGKSVEKLKQHGIEV 121
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQ 252
VG++++ CK LNE FI I + PF L+ +S++G + G+ ES
Sbjct: 122 VVGIKEKECKELNEIFIKYITSKIPFVILKSGMSIDGKIATYSGQSKWITSKESREDSQH 181
Query: 253 LLQEYDAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIV 311
L + +I++ ++ + + + + D + RII SN P+ L+ + ++V
Sbjct: 182 LRNRFHSIMVGVNTVIEDNPELTCRINDGKKLIRIIVDSNLRIPLESKVLTNSDKAAIVV 241
Query: 312 FTDGEITVEP----DMGTKGIETVNL-HQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEM 366
T + MG K IE + +++NLK ++ G S+L++ G
Sbjct: 242 TTLKSDKEKKKKLRSMGIKVIEVADKDNRVNLKELVKRVGEEGIDSILIEGGGT------ 295
Query: 367 LLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTL---LNSLGKRLILKNLQPKMSSQSIVL 423
L +E+ ++ K+ + P G L + L+++ + + +VL
Sbjct: 296 LNFSALEERIVDKVRFYIAPKIIGGQSSRNSIAGKGFFKLDDAVRLEDINYRTIGEDLVL 355
Query: 424 EGYL 427
EGY+
Sbjct: 356 EGYV 359
>gi|295704047|ref|YP_003597122.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319]
gi|294801706|gb|ADF38772.1| riboflavin biosynthesis protein RibD [Bacillus megaterium DSM 319]
Length = 363
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 178/322 (55%), Gaps = 17/322 (5%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
FYM ++ A G T PNP+VG VIV D +IVG G H KAG+PHAE+ ALR AGE A+
Sbjct: 6 FYMNIALQNARSTKGQTEPNPLVGSVIVNDNRIVGIGTHLKAGEPHAEIHALRMAGEQAK 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GATAYV+LEPC+H+GRT PC EAL++A VKKVV+ LDPNP+V G+E L++AGI+V
Sbjct: 66 GATAYVTLEPCSHHGRTGPCAEALVEAGVKKVVIATLDPNPLVAGNGVEILKNAGIEVIT 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG----VAESGGYYSQLL 254
GV +E +++NE F IVT KPF +L+ ++++G + E+ QL
Sbjct: 126 GVCEEESRQMNEVFNKYIVTKKPFVSLKSAITLDGKIATASSHSKWITSEEARLDVHQLR 185
Query: 255 QEYDAIILSASSTKKYSIPASQEPDANQ-PFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
E I++ ++ K + + + + P RI+ S P+ L+ +S + +FT
Sbjct: 186 HETAGILVGVNTVIKDNPELTTRIEGGRSPIRIVMDSKLRMPLE-SKLATDSLAPTWIFT 244
Query: 314 DGEITVEP--DMGTKGIE---TVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
+ E + +G+E T ++NL+ +L S+L++ G
Sbjct: 245 SQGYSKEKKEQLEKQGVEVFVTSGEDKVNLEDMLSILGEKFVSSLLIEGGGEVN------ 298
Query: 369 KEGIEQNLLQKIVVEVLPVWNG 390
+E L+ K+V+ + P +G
Sbjct: 299 AAFLENRLIDKLVLYMAPKLSG 320
>gi|335042329|ref|ZP_08535356.1| pyrimidine deaminase [Methylophaga aminisulfidivorans MP]
gi|333788943|gb|EGL54825.1| pyrimidine deaminase [Methylophaga aminisulfidivorans MP]
Length = 368
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 23/259 (8%)
Query: 79 FYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAE 138
FYM R +ELA + +T PNP VGCVIVKD +IVGEG+H +AG+ HAEV AL AGE A+
Sbjct: 6 FYMARAIELAKNGLYTTDPNPRVGCVIVKDNQIVGEGWHQRAGEGHAEVNALHQAGEKAK 65
Query: 139 GATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTV 198
GA YV+LEPC+HYGRTPPC +AL+ A VK+V + M DPNP+V+ G+ RLR+AGI+V
Sbjct: 66 GADCYVTLEPCSHYGRTPPCADALVNAGVKRVFIAMTDPNPVVSGSGIHRLREAGIEVHT 125
Query: 199 GVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYS---QLLQ 255
+ ++LN F++R+ G+P+ + +S++G GE +G Q L+
Sbjct: 126 KLLSSESEKLNPGFLYRMRYGRPYIRSKVAMSLDGRTAMASGESKWITGPKARLDVQKLR 185
Query: 256 EYDAIILSA---------------SSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPG 300
+ I++ S + P+ Q+ QP +I+ S P
Sbjct: 186 ARSSAIMTGIGTILADNPQLNVRFSPSDDNWYPSGQK--VRQPLKIVVDSEGRLPADAQI 243
Query: 301 LSEESSSKVIVFTDGEITV 319
L E KV+V T +I V
Sbjct: 244 LKE---GKVLVITAKDIAV 259
>gi|297543534|ref|YP_003675836.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841309|gb|ADH59825.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 360
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 160/265 (60%), Gaps = 9/265 (3%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM+R + LA K G T+PNP+VG VIVK+GKI+GEG+H G PHAEV AL++A E EG
Sbjct: 4 YMKRALTLAKKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVENVEG 63
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+T +V+LEPC+HYG+TPPC E +IK+ +K+V + M DPNP V+ G++RL++AGI+V VG
Sbjct: 64 STMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVHVG 123
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGG----YYSQLLQ 255
+ ++ ++LNE F+ I T PF L+ +S++G + G + G + ++
Sbjct: 124 MMEKEARKLNEIFVKYITTKFPFVILKSAMSIDGKIACYNGNSKWITNGKSREFAHKIRG 183
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
AI++ ++ K + ++ P RII S P+ + ++++ +I T+
Sbjct: 184 RVSAIMVGVNTVIKDNPMLTTRLEGYKNPVRIIVDSRGRIPLDSNVIRDKTAKTIIATTE 243
Query: 315 GEITVEPDMGTKGIETVNLHQLNLK 339
+ P+ K +E +++ + LK
Sbjct: 244 ----LMPNNVRKKLEDMDIEVIILK 264
>gi|303252625|ref|ZP_07338788.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302648593|gb|EFL78786.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 379
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 21 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLSG 80
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 81 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEVVEG 140
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 141 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGSGESKWITGESARARVQQTRH 200
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + S+ P+A QP RI+ S +P+
Sbjct: 201 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPL 242
>gi|167038695|ref|YP_001661680.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514]
gi|300913745|ref|ZP_07131062.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561]
gi|307723238|ref|YP_003902989.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513]
gi|166852935|gb|ABY91344.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X514]
gi|300890430|gb|EFK85575.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X561]
gi|307580299|gb|ADN53698.1| riboflavin biosynthesis protein RibD [Thermoanaerobacter sp. X513]
Length = 360
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 177/312 (56%), Gaps = 20/312 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM+R + LA K G T+PNP+VG VIVK+GKI+GEG+H G PHAEV AL++A E EG
Sbjct: 4 YMKRALTLAKKGWGYTNPNPLVGAVIVKNGKIIGEGYHEYFGGPHAEVNALKNAVENVEG 63
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
+T +V+LEPC+HYG+TPPC E +IK+ +K+V + M DPNP V+ G++RL++AGI+V VG
Sbjct: 64 STMFVTLEPCSHYGKTPPCVEEIIKSGIKRVYIAMEDPNPKVSGNGIKRLKEAGIEVHVG 123
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQLLQ 255
+ ++ ++LNE F+ I T PF L+ +S++G + G +S + ++
Sbjct: 124 MMEKEARKLNEIFVKYITTKFPFVILKSAMSIDGKIACYNGNSKWITNEKSRKFAHKIRG 183
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
AI++ ++ K + ++ P RII S P+ + ++++ +I T+
Sbjct: 184 RVSAIMVGVNTVIKDNPMLTTRLEGYKNPVRIIVDSRGRIPLDSNVIRDKTAKTIIATTE 243
Query: 315 GEITVEPDMGTKGIETVNLH---------QLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
+ P+ K +E +++ ++ LK ++ G SVL++ G
Sbjct: 244 ----LMPNNVRKKLEDMDIEVIILKNDNGKVPLKELMIKLGERGIDSVLIEGGGTLN--W 297
Query: 366 MLLKEGIEQNLL 377
LKEGI ++
Sbjct: 298 SALKEGIVDKVM 309
>gi|110598480|ref|ZP_01386751.1| riboflavin biosynthesis protein RibD:Riboflavin-specific
deaminase-like [Chlorobium ferrooxidans DSM 13031]
gi|110339930|gb|EAT58434.1| riboflavin biosynthesis protein RibD:Riboflavin-specific
deaminase-like [Chlorobium ferrooxidans DSM 13031]
Length = 369
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 190/366 (51%), Gaps = 20/366 (5%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG- 134
DD YM RC+ELA K G+ SPNPMVG VIV DG I+GEGFH + G PHAEV A+
Sbjct: 7 DDTVYMNRCIELALKGGGTVSPNPMVGSVIVCDGVIIGEGFHERYGAPHAEVNAIASVAD 66
Query: 135 -ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
EL +T YV+LEPC+H+G+TPPC++ +I+ + +VVVG DP V KG+ +L AG
Sbjct: 67 QELLRRSTLYVNLEPCSHFGKTPPCSDLIIEKGIPRVVVGCRDPFVSVAGKGIAKLLGAG 126
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY---- 249
I VT GV + C +LNEAFI TG PF +L+ +++G + LG +G
Sbjct: 127 IAVTEGVLEAACVKLNEAFIKSHTTGLPFVSLKLAETLDGKIATSLGASKWITGEAARME 186
Query: 250 YSQLLQEYDAIILSASSTKKYSIPAS-QEPDANQPFRIITVSNHASPIRIPGLSEESSSK 308
+L YDA+++ ++ + + + P R++ + P+ + E+ +
Sbjct: 187 VHRLRARYDAVVVGEATVRCDDAELTVRHCSGRNPLRVVLDRRLSLPVESKIFNTEAPTI 246
Query: 309 VIVFTDGE-ITVEPDMGTKGIETVNLH----QLNLKAVLDYCYSHGFCSVLVDLRGNYGD 363
+ + E + + +G+ + + +L+L+ VL+ + HG S+LV+ G
Sbjct: 247 LFASSAWEGLEKAGLLRERGVTVLFVREHAGELDLRQVLEELHKHGILSILVE--GG--- 301
Query: 364 LEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHTLL--NSLGKRLILKNLQPKMSSQSI 421
L I + L+ KI + + P G D + L + ++LK P+ +
Sbjct: 302 -SRLSASFIRERLVDKIYMFIAPKLFGGDALSSFAPLGISIPDDAVVLKFETPRFFGSDL 360
Query: 422 VLEGYL 427
+LE Y+
Sbjct: 361 LLEAYV 366
>gi|146293872|ref|YP_001184296.1| riboflavin biosynthesis protein RibD [Shewanella putrefaciens
CN-32]
gi|145565562|gb|ABP76497.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella putrefaciens CN-32]
Length = 384
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 111/153 (72%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA K +T PNP VGCVIVKD +I+GEG+H KAG+PHAEV ALR AGE A GA
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGEPHAEVHALRMAGERARGA 74
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V VG+
Sbjct: 75 TAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVDVGL 134
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
+ LN F+ R+ +G P T++ S++G
Sbjct: 135 HRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|307245212|ref|ZP_07527303.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254158|ref|ZP_07536003.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258621|ref|ZP_07540356.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853856|gb|EFM86070.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862858|gb|EFM94807.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867278|gb|EFM99131.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 361
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 139/239 (58%), Gaps = 5/239 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 6 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAILHCKEDLFG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 66 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGAGQLRQAGVEVVEG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 126 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATSTGESKWITGELARARVQQTRH 185
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFT 313
+Y AI++ + + S+ P+A QP RI+ S +P+ + + ++ T
Sbjct: 186 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPLDCQLVQTAKEYRTVIAT 244
>gi|190149675|ref|YP_001968200.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|189914806|gb|ACE61058.1| riboflavin biosynthesis protein [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
Length = 379
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 21 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLSG 80
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 81 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGANQLRQAGVEVVEG 140
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 141 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGSGESKWITGESARARVQQTRH 200
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + S+ P+A QP RI+ S +P+
Sbjct: 201 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPL 242
>gi|194333661|ref|YP_002015521.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii
DSM 271]
gi|194311479|gb|ACF45874.1| riboflavin biosynthesis protein RibD [Prosthecochloris aestuarii
DSM 271]
Length = 373
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 181/343 (52%), Gaps = 27/343 (7%)
Query: 68 GQVQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEV 127
G ++ D +YM RC+ELA K G SPNPMVG VIV + ++VGEGFH + G PHAEV
Sbjct: 2 GHASHSTARDEYYMHRCLELARKGAGLVSPNPMVGSVIVVEDRVVGEGFHERYGGPHAEV 61
Query: 128 FALRDAGE--LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKG 185
AL + L +T YV+LEPC+HYG+TPPC++ +I K+++VVVG LDP+ V KG
Sbjct: 62 NALASVSDASLLPSSTLYVNLEPCSHYGKTPPCSDLIISKKIRRVVVGCLDPHEKVAGKG 121
Query: 186 LERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV-- 243
+E+LR AG++VT+GV + LNEAFI PF L+ +++G + GE
Sbjct: 122 IEKLRQAGVEVTIGVLQRESEALNEAFIKSHTISMPFVVLKTAQTIDGRIAVASGESKWV 181
Query: 244 --AESGGYYSQLLQEYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPIRIPG 300
AES ++ +DA++ ++S+ S + + P R++ +R+P
Sbjct: 182 TGAESRREVHRMRSVHDAVMTTSSTVIADNSRLTVRHCEGRNPVRVVL----DRLLRVPL 237
Query: 301 LSE--ESSSKVIVFTDGEI-TVEPDMGTKGIETV------NLHQLNLKAVLDYCYS-HGF 350
S + +K I++T + + E K + + + L+L AVL + H
Sbjct: 238 SSAIFDGEAKTILYTSNALGSSEKARALKAMGVIVCAAGDDGDFLDLSAVLKSLHDEHAL 297
Query: 351 CSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
S++V+ G L I L+ +IV V P G+DG
Sbjct: 298 LSIMVEAGGT------LAGALIRHRLVDRIVWFVAPKLFGADG 334
>gi|254431289|ref|ZP_05044992.1| riboflavin biosynthesis protein RibD [Cyanobium sp. PCC 7001]
gi|197625742|gb|EDY38301.1| riboflavin biosynthesis protein RibD [Cyanobium sp. PCC 7001]
Length = 371
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 168/314 (53%), Gaps = 15/314 (4%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
M+R ++LA G TSPNPMVGCV++ +G++VGEG+H +AG+ HAEV ALR AGE A G
Sbjct: 1 MQRALQLANLGCGRTSPNPMVGCVVLDAEGRLVGEGYHSQAGEAHAEVGALRQAGERARG 60
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
TA V+LEPC H+GRTPPC++AL+ A +++VVV M DP+P V G+ +LR AG++V G
Sbjct: 61 GTAVVTLEPCCHHGRTPPCSDALLAAGIRRVVVAMADPDPQVAGGGIAQLRSAGVEVIEG 120
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
V E + LN AF+HRI +PF L++ + V+G G SG + L
Sbjct: 121 VAAEEARALNRAFLHRIAHRRPFGILKWAMGVDGRTALPNGASQWISGPEARNWVHALRA 180
Query: 256 EYDAIILSASSTKKYS-IPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVIVFTD 314
DA+++ + + + S+ ++P R++ + A P R L + + + +V
Sbjct: 181 RCDAVVVGGGTVRADDPLLTSRGRRHSEPLRVVLSRSLALPERA-RLWDTAQAPTLVAHG 239
Query: 315 GEITVEP--DMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLLKEGI 372
E + +GIE + L A++ G VL + L +
Sbjct: 240 YEAPARRRFQLDQRGIERLVLEACEPWALMQELARRGCNQVLWECGAE------LATAAL 293
Query: 373 EQNLLQKIVVEVLP 386
Q+ +Q++ + P
Sbjct: 294 RQSCVQEVAAVIAP 307
>gi|359451174|ref|ZP_09240585.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20480]
gi|358043028|dbj|GAA76834.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Pseudoalteromonas sp. BSi20480]
Length = 383
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 141/235 (60%), Gaps = 16/235 (6%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T+PNP VGCV+VKD +I+GEGFH AGQ HAEV AL AGE
Sbjct: 11 DKLYMARAIELAKKGRFTTTPNPNVGCVLVKDNQIIGEGFHQLAGQGHAEVNALAVAGEK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E L A +KKV+ M+D NP V KGL+ L DAGI+V
Sbjct: 71 AKGATAYVTLEPCSHYGRTPPCAEGLKAAGIKKVIAAMVDTNPQVAGKGLKILSDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ ++ + LN F R+ G P+ T + S++G + G+ +G + +Q
Sbjct: 131 AHGLLEQEARALNFGFFKRMEQGLPYVTCKLAASIDGKTALKNGKSKWITGPAARKDVQL 190
Query: 257 YDA---IILSASST-----KKYSIPASQEPDA-------NQPFRIITVS-NHASP 295
Y A IL+ + T K ++ AS+ P + QP R+I S N +P
Sbjct: 191 YRAQSCAILTGADTVLVDNAKLNVRASELPYSLPTNLPLRQPVRVIIDSQNRLTP 245
>gi|328951151|ref|YP_004368486.1| riboflavin biosynthesis protein RibD [Marinithermus hydrothermalis
DSM 14884]
gi|328451475|gb|AEB12376.1| riboflavin biosynthesis protein RibD [Marinithermus hydrothermalis
DSM 14884]
Length = 390
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 163/310 (52%), Gaps = 35/310 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMRR ++LA +A G T PNP+VG V+VKDG+IVGEG+HP+AG PHAEVFALR AGE
Sbjct: 5 DERYMRRALQLAERARGHTHPNPLVGAVVVKDGRIVGEGYHPRAGLPHAEVFALRQAGEA 64
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPCNH+GRTPPCT AL++A V +VVV DPNP GLERL AG+ V
Sbjct: 65 ARGATVYVTLEPCNHHGRTPPCTTALLEAGVARVVVAARDPNPKAQG-GLERLAQAGVAV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + NE F H + +PF + +++G V + G +G ++
Sbjct: 124 QWGVLEAEARAQNEVFFHGLEQNRPFVLWKAATTLDGRVATRTGHAQWVTGPQSRRIAHA 183
Query: 257 Y----------------DAIILSASSTKKYSIPASQEPDA-NQPFRIITVSNHASP---- 295
Y D L+ + P EP P +++ + +P
Sbjct: 184 YRQSLAAIAVGVGTVLADDPALTVRDPEFRPYPWMLEPPPLRDPLKVVFDTQARTPPQAR 243
Query: 296 IRIPGLSEESSSKVIVFTDGEITVEPDMGTKGIETVNLH---------QLNLKAVLDYCY 346
+ PG E ++V+VF +E T+ +E + +L+A L++ +
Sbjct: 244 LFAPGPRGE-PARVVVFVGAAAPLE---RTRALEAAGARVVPLPDEEGRPSLRAALEWLW 299
Query: 347 SHGFCSVLVD 356
+ G +L++
Sbjct: 300 NEGIDGLLLE 309
>gi|307256427|ref|ZP_07538209.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306865057|gb|EFM96958.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 364
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 5/222 (2%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMRR + LA + +G T+PNP+VGCVIVK+G+IV EG+H K G HAE A+ E G
Sbjct: 6 YMRRAIALAKQGLGWTNPNPLVGCVIVKNGEIVAEGYHEKIGGWHAERNAVLHCKEDLSG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
ATAYV+LEPC H+GRTPPC++ LI+ +KKV +G DPNP+V +G +LR AG++V G
Sbjct: 66 ATAYVTLEPCCHHGRTPPCSDLLIERGIKKVFIGSSDPNPLVAGRGAGQLRQAGVEVVEG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQ 255
+ E C LN F H I T +P+ ++Y ++ +G + GE +G Q
Sbjct: 126 LLKEECDALNPIFFHYIQTKRPYVLMKYAMTADGKIATGTGESKWITGELARARVQQTRH 185
Query: 256 EYDAIILSASST-KKYSIPASQEPDANQPFRIITVSNHASPI 296
+Y AI++ + + S+ P+A QP RI+ S +P+
Sbjct: 186 QYSAIMVGVDTVLADNPMLNSRMPNAKQPVRIVCDSQLRTPL 227
>gi|120598057|ref|YP_962631.1| riboflavin biosynthesis protein RibD [Shewanella sp. W3-18-1]
gi|120558150|gb|ABM24077.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Shewanella sp. W3-18-1]
Length = 384
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 111/153 (72%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA K +T PNP VGCVIVKD +I+GEG+H KAG+PHAEV ALR AGE A GA
Sbjct: 15 MSRAIQLARKGFYTTRPNPSVGCVIVKDNQIIGEGYHQKAGEPHAEVHALRMAGERARGA 74
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+HYGRTPPC ALI VK+VVV + DPNP V +G++ LRDAGI+V VG+
Sbjct: 75 TAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDAGIEVDVGL 134
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNG 233
+ LN F+ R+ +G P T++ S++G
Sbjct: 135 HRDEAYALNLGFMKRMESGLPRVTVKLAASLDG 167
>gi|357416231|ref|YP_004929251.1| putative deaminase [Pseudoxanthomonas spadix BD-a59]
gi|355333809|gb|AER55210.1| putative deaminase [Pseudoxanthomonas spadix BD-a59]
Length = 364
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 156/291 (53%), Gaps = 14/291 (4%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R + LA + +T PNPMVGCVI +VGEGFH AGQPHAEVFAL AG
Sbjct: 8 DHAHMARALRLAERGAWTTKPNPMVGCVIAHGQTVVGEGFHQYAGQPHAEVFALGQAGAR 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC H GRT PC +AL+ A V +VV M DP P V+ G E+LR AGI V
Sbjct: 68 ARGATVYVTLEPCAHTGRTGPCADALVAAGVSRVVTAMRDPFPQVDGAGFEKLRAAGIAV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
VG+ + + LN F+ ++V G+P+ ++ SV+G GE +G +Q
Sbjct: 128 QVGLLEAQVRELNRGFLSQVVRGRPWLRVKLGASVDGRTAMASGESKWITGAAARADVQR 187
Query: 257 YDA---IILSASSTKKYSIPA-SQEPDANQ----PFRIITVSNHASPIRIPGLSEESSSK 308
+ A IL+ + T P+ + P+ +Q P R++ + AS + + ++
Sbjct: 188 WRARSGAILTGARTVIADDPSLTARPEEDQPVVPPLRVVLDATLAS---LDQVRVQAGDA 244
Query: 309 VIVFTDGEI-TVEPDMGTKGIETVNLHQ--LNLKAVLDYCYSHGFCSVLVD 356
++ G + T D E + LH+ L+L+AVL H C V V+
Sbjct: 245 PTLYLHGPLPTRVADHDQVHFEQIPLHEGRLDLRAVLAALARHRVCEVQVE 295
>gi|148654182|ref|YP_001281275.1| riboflavin biosynthesis protein RibD [Psychrobacter sp. PRwf-1]
gi|148573266|gb|ABQ95325.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Psychrobacter sp. PRwf-1]
Length = 368
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 128/196 (65%), Gaps = 3/196 (1%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAG 134
K D +YM +E A K + +T PNP VGCVIV + IVG G+HP+AGQPHAEVFALR+A
Sbjct: 28 KQDIYYMNLAIEEAKKGLFTTRPNPAVGCVIVNNNLIVGTGYHPQAGQPHAEVFALREAK 87
Query: 135 ELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGI 194
+ A+GATAYV+LEPC+H GRTPPC +ALI + V +VVV LDPNP V +G+ L+ AGI
Sbjct: 88 DNAKGATAYVTLEPCSHTGRTPPCAQALINSGVSRVVVAGLDPNPKVAGRGIAMLKAAGI 147
Query: 195 DVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLL 254
+VTVGV + ++LN F+ + T P+ L+ S++G GE +G + +
Sbjct: 148 EVTVGVSTQQAEQLNLGFLKAMRTQMPYVRLKIASSLDGRTAMASGESKWITGPAAREDV 207
Query: 255 QEYDAI---ILSASST 267
Q+ A+ I++ S T
Sbjct: 208 QKLRALSGAIITGSQT 223
>gi|385800110|ref|YP_005836514.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Halanaerobium praevalens DSM 2228]
gi|309389474|gb|ADO77354.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase;
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Halanaerobium praevalens DSM 2228]
Length = 379
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 185/350 (52%), Gaps = 35/350 (10%)
Query: 70 VQNNDKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFA 129
+Q D YM R ++LA AVG TSPNP+VG VIVK+G+I+GEG+H K G HAEV A
Sbjct: 1 MQQFSISDQKYMDRALKLAALAVGKTSPNPLVGAVIVKNGEIIGEGYHQKYGAQHAEVNA 60
Query: 130 LRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
L AG AEGA +V+LEPC+H+G+TPPCT+A+I + +K+VVV ++DPNP V +G+++L
Sbjct: 61 LAKAGFKAEGAELFVNLEPCSHFGKTPPCTQAIIASGLKRVVVALVDPNPQVAGRGIKQL 120
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG------V 243
R AGI V +G+ K+LNE F+ I + PF L+ +++G++ +
Sbjct: 121 RKAGIKVEIGLLAAKAKKLNEIFLKYITSELPFVYLKKAQTLDGYIATSSSDSKWITNEQ 180
Query: 244 AESGGYYSQLLQEYDAIILSASSTKKYSIPA----SQEPDANQPFRIITVSNHASPIRIP 299
A G+ +L Q+ DAI++ + PA ++ + P RII PI
Sbjct: 181 ARKEGH--KLRQKVDAILVGIGTILADD-PALTTRLEKTETKDPLRIILDPLLEIPIDAQ 237
Query: 300 GLSEESSSKVIVFTDGEITVEPDMGTK----------GIETVNL-----HQLNLKAVLDY 344
+ ++S ++ ++ T E + G++ ++ + +LK +L Y
Sbjct: 238 IIEQKSEAETLIITATEFPPAQAVAKFKKKEKILKKGGVQIISFAVDANNYFDLKKILKY 297
Query: 345 CYSHGFCSVLVDLRGNYGDLEMLLKEGIEQNLLQKIVVEVLP-VWNGSDG 393
+ S+LV+ L + Q L+ K + P ++ G+DG
Sbjct: 298 LHQQKIASILVEGGAK------LSHSFLAQKLIDKFYYFIAPKIYGGNDG 341
>gi|365848288|ref|ZP_09388765.1| riboflavin biosynthesis protein RibD [Yokenella regensburgei ATCC
43003]
gi|364570996|gb|EHM48595.1| riboflavin biosynthesis protein RibD [Yokenella regensburgei ATCC
43003]
Length = 367
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 127/201 (63%), Gaps = 3/201 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R ++LA + +T PNP VGCVIVKDG +VGEGFH +AG+PHAEV ALR AG+
Sbjct: 3 DEMYMARALKLAQRGRFTTHPNPNVGCVIVKDGVVVGEGFHYRAGEPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC EALI A V +VV M DPNP V +GL RL++ GIDV
Sbjct: 63 ANGATAYVTLEPCSHHGRTPPCCEALIAAGVSRVVAAMQDPNPQVAGRGLHRLKEEGIDV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
+ G+ + LN+ F+ R+ T P+ L+ S++G GE + + Q
Sbjct: 123 SHGLMMSEAELLNKGFLKRMRTAFPYIQLKLGASLDGRTAMASGESQWITSPAARRDVQR 182
Query: 254 LQEYDAIILSASSTKKYSIPA 274
L+ IL+ ++T PA
Sbjct: 183 LRAQSHAILTTAATVLADDPA 203
>gi|258510931|ref|YP_003184365.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477657|gb|ACV57976.1| riboflavin biosynthesis protein RibD [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 371
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 115/160 (71%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
+D YMR +E+A G TSPNPMVG ++V G++VG+G H AG PHAEV ALR AG+
Sbjct: 3 EDERYMRMALEVARLGEGQTSPNPMVGAIVVNGGRVVGQGAHLMAGTPHAEVHALRMAGD 62
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A+GAT YV+LEPCNH+GRTPPCT+A++ V++VVV LD +P G++RL++AGI+
Sbjct: 63 AAQGATLYVTLEPCNHHGRTPPCTDAILATGVRRVVVAALDVDPRTAGLGVKRLQEAGIE 122
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHV 235
VTVGV + + LN F HR+ TG+P+ + ++++GHV
Sbjct: 123 VTVGVLEAEARELNRHFFHRVTTGRPYVVYKVAMTLSGHV 162
>gi|228998898|ref|ZP_04158483.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides Rock3-17]
gi|228760914|gb|EEM09875.1| RibD (Riboflavin-specific deaminase) [Bacillus mycoides Rock3-17]
Length = 370
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 142/241 (58%), Gaps = 6/241 (2%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YMR ++LA G TSPNPMVG V+VKDG IVG G H +AG+ HAEV ALR AG+
Sbjct: 3 DQEYMRIALQLAQSTAGQTSPNPMVGAVVVKDGNIVGMGAHLRAGEEHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A G+T YV+LEPC+H+G+TPPC + LI+ KVK+VV+ LD NP+V+ G +RL+ AGI V
Sbjct: 63 ANGSTVYVTLEPCSHFGKTPPCCDLLIEKKVKRVVIATLDCNPLVSGSGAKRLQKAGISV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
T V +E LN F H + T PF T++ +S++G + GE +G + +
Sbjct: 123 TTSVLEEEATALNRYFFHYMKTKLPFVTIKTAMSLDGKIATTTGESKWITGEVARTDVHQ 182
Query: 257 Y----DAIILSASST--KKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
Y DAI++ ++ S+ P RII ++ +P+ +++E + I
Sbjct: 183 YRHTHDAILIGVNTVIADNPSLTTRLPNGGKHPIRIILDTHLRTPLSSHVITDEMAPTWI 242
Query: 311 V 311
+
Sbjct: 243 I 243
>gi|307129900|ref|YP_003881916.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Dickeya dadantii 3937]
gi|306527429|gb|ADM97359.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino) uracil
reductase [Dickeya dadantii 3937]
Length = 370
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 129/194 (66%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R +ELA + +TSPNP VGCVIV+D +IVGEG+H KAG+PHAEV ALR AG+
Sbjct: 6 DEFYMARALELARRGRFTTSPNPNVGCVIVRDDEIVGEGYHQKAGEPHAEVHALRMAGDK 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +AL+ A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 66 ARGATAYVTLEPCSHHGRTPPCADALLAAGVARVVAAMQDPNPQVAGRGLHRLQQAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
V E +++N F+ R+ TG P+ L+ S++G GE + Q +Q
Sbjct: 126 RHSVLMEQAEKINRGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSQQSRQDVQR 185
Query: 257 YDA---IILSASST 267
+ A ILS+S+T
Sbjct: 186 FRAQSSAILSSSAT 199
>gi|282883344|ref|ZP_06291938.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis
315-B]
gi|281296848|gb|EFA89350.1| riboflavin biosynthesis protein RibD [Peptoniphilus lacrimalis
315-B]
Length = 372
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 192/368 (52%), Gaps = 29/368 (7%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA---GEL 136
YM ++LA K G T NPMVGCVIV D +I+G G+H K G HAE A+ DA GE
Sbjct: 10 YMSLAMDLAEKGKGFTLTNPMVGCVIVNDDRIIGRGYHKKFGDLHAETMAIEDAQKNGES 69
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
EG+T YV+LEPC HYG+ PPCT+A+I+ K+KKVV+ +DPN V+ KG++ L DAGI+V
Sbjct: 70 LEGSTLYVNLEPCCHYGKQPPCTKAIIENKIKKVVIANVDPNKKVSGKGIKTLEDAGIEV 129
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQ 252
G+ +E +LNE F H I T +PF T++ ++++G + G+ S Y +
Sbjct: 130 VEGIMEEEGLKLNEEFFHFIKTQRPFVTMKSAMTLDGKIASVTGDSKWISSQISRDYVHK 189
Query: 253 LLQEYDAIILSASSTKKY--SIPASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI 310
L E +AI++ + K S+ + P +I+ S P+ LS + +I
Sbjct: 190 LRAENNAIMVGIGTVLKDDPSLNVRIYGNYKNPTKILVDSKLRIPLDAKLLSSSDAPTII 249
Query: 311 VFTDGEITVEPDMGTKGIETVNLH---------QLNLKAVLDYCYSHGFCSVLVDLRGNY 361
T+G + + K E N+H +++L + CSVL++ GN
Sbjct: 250 ACTEG---YDTEKYNKLKEMANVHILLCKKKDGRVDLLDLFSKLKDFDICSVLLEGGGNL 306
Query: 362 GDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDGGNPHT--LLNSLGKRLILKNLQPKMSSQ 419
+ ML +NL+ +++ + P G G +P ++ + + +K+ Q + Q
Sbjct: 307 -NYSML-----RENLVDRLIFFIGPKIIGGSGLSPVAGEGISLMKDAIKIKDFQVEKMGQ 360
Query: 420 SIVLEGYL 427
I++ Y+
Sbjct: 361 DILINAYV 368
>gi|19704838|ref|NP_602333.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296327621|ref|ZP_06870165.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|19712714|gb|AAL93632.1| Diaminohydroxyphosphoribosylaminopyrimidine deaminase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|296155267|gb|EFG96040.1| riboflavin biosynthesis protein RibD [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 369
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 173/317 (54%), Gaps = 37/317 (11%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + G +PNP+VG VIVKDGKI+GEG+H K G PHAEV+AL +AGE
Sbjct: 6 DEKYMARAIELAKRGTGGVNPNPLVGAVIVKDGKIIGEGWHKKFGGPHAEVWALNEAGEN 65
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GAT YV+LEPC+H G+TPPC + +I+A +K+ VV +DPNP+V KG++ + +AGI+V
Sbjct: 66 AKGATVYVTLEPCSHQGKTPPCAKRIIEAGIKRCVVACIDPNPLVAGKGMKIIENAGIEV 125
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ- 255
+GV ++ K +N+ F I P+ L+ ++++G + + G+ + + +Q
Sbjct: 126 ELGVLEKEAKEINKIFFKYIENKIPYLFLKCGITLDGKIATRNGKSKWITNEIAREKVQF 185
Query: 256 ---EYDAIILSASSTKKYSIPASQEPDANQ-------PFRIITVSNHASPIRIPGLSEES 305
++ AI++ ++ K + D + PFR++ N SPI
Sbjct: 186 LRTKFMAIMVGINTVLKDNPSLDSRLDEKKFGIEKRNPFRVVIDPNLESPIE-------- 237
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLE 365
K + F DG+ + KG+E + ++ ++ + L G ++
Sbjct: 238 -GKFLNFNDGKAIIVTSNDNKGLEKLEKYK-------------NLGTIFIFLEGKIFKIQ 283
Query: 366 MLLKE----GIEQNLLQ 378
+LKE GI+ LL+
Sbjct: 284 DILKELGKLGIDSVLLE 300
>gi|255067329|ref|ZP_05319184.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256]
gi|255048480|gb|EET43944.1| riboflavin biosynthesis protein RibD [Neisseria sicca ATCC 29256]
Length = 365
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 166/327 (50%), Gaps = 22/327 (6%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M+ + LA STSPNP VGCVI +IVG+GFH KAG+PHAEV ALR A
Sbjct: 3 DCIDTQMMQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA 62
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE+A GATAYV+LEPC+HYGRTPPC EALI + V +VV M DPNP+V KGL L AG
Sbjct: 63 GEMARGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEAAG 122
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-----VAESGG 248
I G+ + + LN F+ RI G+PF ++ S++G L +G E+
Sbjct: 123 IRTESGLLETEARELNRGFLSRIERGRPFVRIKCAASLDGKT--ALADGRSYWITGEAAR 180
Query: 249 YYSQLLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
Q L+ +L+ T P P QP RI+ S +P+ +S++
Sbjct: 181 ADVQTLRAESCAVLTGIGTVLADNPCLNVRAFPTLRQPARIVLDSKLQTPLGSHIISDDL 240
Query: 306 SSKVIV-FTDGEITVEPDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLVDLRG 359
S +IV D E ++P I + + ++L A+L G+ ++V+
Sbjct: 241 SPTIIVTAVDDEERLKPYHAFSHIRILRSSENANGRIDLAALLPQLAELGYGEIMVEAGA 300
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP 386
L IE L +IV+ P
Sbjct: 301 T------LASAFIESGLADEIVLYQAP 321
>gi|218283800|ref|ZP_03489723.1| hypothetical protein EUBIFOR_02317 [Eubacterium biforme DSM 3989]
gi|218215606|gb|EEC89144.1| hypothetical protein EUBIFOR_02317 [Eubacterium biforme DSM 3989]
Length = 389
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 172/324 (53%), Gaps = 40/324 (12%)
Query: 69 QVQNNDKDDGF------YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQ 122
Q +N ++ +G YM R ++LA K G T+PNPMVG VIVKDG+I+GEG+H K G+
Sbjct: 3 QAKNRNQKEGIKMTDQEYMLRAIQLAKKGEGWTNPNPMVGAVIVKDGRIIGEGYHKKYGE 62
Query: 123 PHAEVFALRDAGELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVN 182
HAE A+ E AEGA YV+LEPC H+G+TPPCTEA+I+ K+KKVV+G DPNP V
Sbjct: 63 LHAERNAIASLTESAEGAVIYVTLEPCCHHGKTPPCTEAIIEQKIKKVVIGSRDPNPKVA 122
Query: 183 SKGLERLRDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG 242
KG++ LR AG+ V E C RLN F H I P+ ++Y ++++G + + G
Sbjct: 123 GKGVQMLRKAGVTVVEDFMGEECDRLNPVFFHYITMKTPYVVMKYAMTLDGKIATKTGAS 182
Query: 243 VA----ESGGYYSQLLQEYDAIILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRI 298
S + +Y I++ + + + P + V SP+RI
Sbjct: 183 KWITSLASRKEVQHMRHQYMGIMVGIGTVLE-----------DDPMLNVRVEGWKSPVRI 231
Query: 299 PGLSE----------ESSSK---VIVFTDGEITVE--PDMGTKGIETV----NLHQLNLK 339
S+ +S+ K ++ + D + T E + T+G+ET+ +Q++LK
Sbjct: 232 VCDSKLRIQLDSQIVKSAKKYRTIVAYADQKNTGEKIKILHTRGVETIYCPDEKNQIDLK 291
Query: 340 AVLDYCYSHGFCSVLVDLRGNYGD 363
++ + G S+L++ G D
Sbjct: 292 RLMIDLGNRGIDSILLEGGGTLND 315
>gi|390454144|ref|ZP_10239672.1| riboflavin biosynthesis protein
(diaminohydroxyphosphoribosylaminopyrimidine deaminase
(riboflavin-specific deaminase) and
5-amino-6-(5-phosphoribosylamino)uracil reductase)
[Paenibacillus peoriae KCTC 3763]
Length = 369
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 178/318 (55%), Gaps = 17/318 (5%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YMR +E A A G T PNP+VG VIV +G+IVG G H K G+PHAE+ ALR AGE A G
Sbjct: 10 YMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMAGEHARG 69
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+H+GRT PC EA+++A +++VV+ LDPNP+V+ +G++ L+D GI+V VG
Sbjct: 70 ATIYVTLEPCSHHGRTGPCAEAIVQAGIRRVVIAALDPNPLVSGRGVQILKDVGIEVIVG 129
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQE 256
V ++ R+NE F IV+ +PF T++ ++++G + + E +E+ L+
Sbjct: 130 VCEQESIRMNEVFNRYIVSKRPFITIKSAVTLDGKIATRTSESKWITSEAAREDVHRLRH 189
Query: 257 YDAIILSASSTKKYSIP--ASQEPDANQPFRIITVSNHASPIRIPGLSEESSSKVI---- 310
IL T + P ++ P+ P RII S P+ +++ + I
Sbjct: 190 EHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSTLRIPLDARVITDGEAPTWIFTGR 249
Query: 311 VFTDGEITVEPDMGTKGIETVN--LHQLNLKAVLDYCYSHGFCSVLVDLRGNYGDLEMLL 368
+ +G+ + +G K T N ++NL +LD + SV V+ G E +
Sbjct: 250 AYDEGKRSQLEQLGVKVYPTQNESSDRVNLPQMLDILGAAEVSSVFVE-----GGAE-VN 303
Query: 369 KEGIEQNLLQKIVVEVLP 386
++Q L K+V+ + P
Sbjct: 304 ASFVQQGLADKLVLYIAP 321
>gi|419798932|ref|ZP_14324318.1| riboflavin biosynthesis protein RibD [Neisseria sicca VK64]
gi|385693267|gb|EIG23918.1| riboflavin biosynthesis protein RibD [Neisseria sicca VK64]
Length = 365
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 166/327 (50%), Gaps = 22/327 (6%)
Query: 74 DKDDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDA 133
D D M+ + LA STSPNP VGCVI +IVG+GFH KAG+PHAEV ALR A
Sbjct: 3 DCIDTQMMQNALALARLGRFSTSPNPRVGCVIAHGSQIVGQGFHVKAGEPHAEVHALRQA 62
Query: 134 GELAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAG 193
GE+A GATAYV+LEPC+HYGRTPPC EALI + V +VV M DPNP+V KGL L AG
Sbjct: 63 GEMARGATAYVTLEPCSHYGRTPPCAEALIGSGVSRVVAAMTDPNPLVAGKGLAMLEVAG 122
Query: 194 IDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG-----VAESGG 248
I G+ + + LN F+ RI G+PF ++ S++G L +G E+
Sbjct: 123 IRTESGLLETEARELNRGFLSRIERGRPFVRVKCAASLDGKT--ALADGRSYWITGEAAR 180
Query: 249 YYSQLLQEYDAIILSASSTKKYSIP---ASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
Q L+ +L+ T P P QP RI+ S +P+ +S++
Sbjct: 181 ADVQTLRAESCAVLTGIGTVLVDNPRLNVRAFPTLRQPARIVLDSKLQTPLNSHMVSDDL 240
Query: 306 SSKVIV-FTDGEITVEPDMGTKGIETVNLHQ-----LNLKAVLDYCYSHGFCSVLVDLRG 359
S +IV D E ++P I + + ++L A+L G+ ++V+
Sbjct: 241 SPTIIVTAVDDEECLKPYRAFNHIRILRSSENADGRIDLAALLPRLAELGYGEIMVEAGA 300
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLP 386
L IE L +IV+ P
Sbjct: 301 T------LTSAFIEAGLADEIVLYQAP 321
>gi|221632527|ref|YP_002521748.1| riboflavin biosynthesis protein RibD [Thermomicrobium roseum DSM
5159]
gi|221155601|gb|ACM04728.1| riboflavin biosynthesis protein RibD [Thermomicrobium roseum DSM
5159]
Length = 382
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 173/332 (52%), Gaps = 24/332 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D ++M+R + LA +A G +PNP VG VIV++G++VGEG G PHAE+ AL+ AGE
Sbjct: 8 DRYWMQRAIALARRAQGRVAPNPAVGAVIVREGEVVGEGCTQPPGGPHAEIVALQRAGER 67
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GAT YV+LEPC HYGRTPPC EA+++A +++VV +LDP P V +G LR AG+DV
Sbjct: 68 ARGATLYVTLEPCAHYGRTPPCVEAIVQAGIRRVVAAILDPFPAVAGRGFTLLRQAGVDV 127
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGV----AESGGYYSQ 252
TVG+E E +N ++ R+ P TL+Y ++++GH+ + G E+ Y Q
Sbjct: 128 TVGIEAEAAAEVNAGYLKRLRESLPEVTLKYAMTLDGHIATRTGHSKWITGQEARRYAHQ 187
Query: 253 LLQEYDAIILSASS--TKKYSIPASQEP-DA-----NQPFRIITVSNHASPIRIPGLSEE 304
L ++DAI++ + T + +P DA + P R++ + +P L
Sbjct: 188 LRDQHDAILVGVETVLTDDPELTTRLDPRDAGDGGPHSPLRVVIDTRARTPPSARLLDSR 247
Query: 305 SSSKVIVFTDGEITVE--PDMGTKGIE----TVNLHQLNLKAVLDYCYSHGFCSVLVDLR 358
++ +V T E + G E + ++L A L G VLV+
Sbjct: 248 LPARTLVITTEAAPPERVAALWKAGAELAFVPLRCGHVDLAAALRVLAERGINRVLVEGG 307
Query: 359 GNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNG 390
G +L EQ L +V + PV G
Sbjct: 308 GR------VLGSLFEQGLADAVVAFIAPVLVG 333
>gi|156935037|ref|YP_001438953.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii ATCC BAA-894]
gi|156533291|gb|ABU78117.1| hypothetical protein ESA_02888 [Cronobacter sakazakii ATCC BAA-894]
Length = 367
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 115/165 (69%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA + +T PNP VGCVIVK+G IVGEGFH +AG PHAEV ALR AG+
Sbjct: 3 DEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGGPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|92114703|ref|YP_574631.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Chromohalobacter salexigens DSM 3043]
gi|91797793|gb|ABE59932.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase /
5-amino-6-(5-phosphoribosylamino)uracil reductase
[Chromohalobacter salexigens DSM 3043]
Length = 380
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 166/312 (53%), Gaps = 26/312 (8%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA +T PNP VGCV+V G+IVGEG+H AG PHAEV ALR+AG+ A GA
Sbjct: 10 MARALQLARHGCYTTHPNPRVGCVVVNAGRIVGEGYHAYAGGPHAEVHALREAGDAAAGA 69
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC+H+GRTPPC +ALI A V++VVV M+DPNP V +G+ LR+AGI+V VG+
Sbjct: 70 TVYVTLEPCSHHGRTPPCAQALIDAGVRRVVVAMVDPNPQVAGRGVAMLREAGIEVDVGL 129
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG-----------GY 249
+ LN F+ R+ G PF L+ +S++G GE +G
Sbjct: 130 LATDAEALNVGFVKRMRDGLPFVRLKMAMSLDGRTAMASGESQWITGASARTEVQRLRAR 189
Query: 250 YSQLLQEYDAIILSAS----STKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEES 305
S ++ D++I S + ++ + QP R++ S P+ L E
Sbjct: 190 ASAVMTGVDSVIFDNSRLTVRADQLALEDGETIARRQPLRVVVDSRLRLPLAAACLREPG 249
Query: 306 SSKVIVFTDGEITVEPDMGTKGIETVNL-----HQLNLKAVLDYCYSHGFCS-VLVD--- 356
+ V T E E + G E + L +++L+A+L Y C+ VL++
Sbjct: 250 RTLVATCTPDEARREA-LSRAGAEVLMLPADEGGRVDLRALLAYLARDEQCNEVLLETGA 308
Query: 357 -LRGNYGDLEML 367
L G DLE +
Sbjct: 309 TLAGAMLDLEAI 320
>gi|77361290|ref|YP_340865.1| riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis
TAC125]
gi|76876201|emb|CAI87423.1| Riboflavin biosynthesis protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 382
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 175/334 (52%), Gaps = 25/334 (7%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA K +T+PNP VGCV+VK+ +IVGEGFH AGQ HAEV AL AG
Sbjct: 11 DEMYMARAIELAKKGRFTTTPNPNVGCVLVKNNEIVGEGFHQLAGQGHAEVNALAMAGSK 70
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A+GATAYV+LEPC+HYGRTPPC E L A V KV+ M+D NP V KGL+ L DAGI+V
Sbjct: 71 AKGATAYVTLEPCSHYGRTPPCAEGLKAAGVVKVIAAMVDSNPQVAGKGLKILSDAGIEV 130
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
G+ + + LN F R+ G P+ T + S++G G+ +G Q +Q
Sbjct: 131 AYGLLEAQARALNLGFFKRMEHGLPYVTCKMAASIDGKTALNNGQSKWITGAAARQDVQL 190
Query: 257 YDA---IILSASST-----KKYSIPASQEPDA-------NQPFRIITVSNHASPIRIPGL 301
Y A IL+ + T K ++ ++ P A QP R+I S + +
Sbjct: 191 YRAQSCAILTGADTVLVDDAKLNVRKNELPQALPTQLPLRQPVRVIIDSQNRLTPNLALF 250
Query: 302 SEESSSKVIVFTDGEITVE--PDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVDLRG 359
+ E S++I+FT + P + T + +++L AVL F +V ++
Sbjct: 251 AIE--SEIIIFTTKVDKSQHWPHFVKHIVVTASNSKVDLTAVLKKLAKLQFNTVWLEAGA 308
Query: 360 NYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG 393
L + +E +L+ + + + P G DG
Sbjct: 309 T------LAGKMVELDLIDEFIFYLAPKLIGCDG 336
>gi|407684438|ref|YP_006799612.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'English Channel 673']
gi|407246049|gb|AFT75235.1| Riboflavin biosynthesis protein RibD [Alteromonas macleodii str.
'English Channel 673']
Length = 379
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 179/325 (55%), Gaps = 29/325 (8%)
Query: 75 KDDGFYMRRCVELATKAVGSTSPNPMVGCVIV-KDGKIVGEGFHPKAGQPHAEVFALRDA 133
K+D F+M + ++LA + +TSPNP VGCVIV ++ ++G+G+H +AG PHAEV ALR A
Sbjct: 7 KNDYFWMAKAIQLAQQGRFTTSPNPRVGCVIVDENNHLLGQGYHIQAGTPHAEVHALRQA 66
Query: 134 GEL----AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERL 189
A+GATAYV+LEPC+H+GRTPPC AL++AKV +VV+ M DPNP V G+ L
Sbjct: 67 SNARPQGAKGATAYVTLEPCSHFGRTPPCAVALVEAKVARVVIAMTDPNPNVCGNGISIL 126
Query: 190 RDAGIDVTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGY 249
++AGI+V V LN FI R++TGKPF ++ +S++G + Q G +G
Sbjct: 127 QEAGIEVVSEVMAAEAAALNPGFIKRMLTGKPFVRVKLGISLDGKIALQNGVSQWITGAE 186
Query: 250 YSQLLQEYDA---IILSASSTKKYSIPASQEPDANQPFRIITVSNHASPIRIPGLSEESS 306
+ +Q+Y A ++L+ S T K P+ + F + + P R+ + +
Sbjct: 187 ARRDVQQYRAQSCVVLTGSGTVKADNPSLLVREQEAQFTNYPLEHIRQPARVVIDGKSAL 246
Query: 307 SK-VIVFTDGEITV------EPDMGTKGIETV-------NLHQLNLKAVLDYCYSHGFCS 352
S+ +F DG +T+ PD T+ +V NLH L + A+ D Y+ +
Sbjct: 247 SRGYALFNDGNLTLTATSQAHPDTATQHYLSVDEKDGKLNLHSL-MSALGDKQYNEVWVE 305
Query: 353 VLVDLRGNYGDLEMLLKEGIEQNLL 377
L G LL+EG+ L+
Sbjct: 306 AGPGLAG------ALLQEGLVDELI 324
>gi|392546200|ref|ZP_10293337.1| riboflavin biosynthesis protein [Pseudoalteromonas rubra ATCC
29570]
Length = 372
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 136/230 (59%), Gaps = 13/230 (5%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T+PNP VGCVIV +G+IVGEGFH +AG+PHAEV ALR+A
Sbjct: 7 DQTYMARAIELAQQGRFTTTPNPNVGCVIVNNGEIVGEGFHLRAGEPHAEVHALREAKAR 66
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYGRTPPC + LI+A V KV+ M+DPNP V +GL L +AGI+
Sbjct: 67 ARGATAYVTLEPCSHYGRTPPCAKGLIEAGVSKVIAAMVDPNPEVAGRGLAMLNEAGIET 126
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQL 253
G+ ++ + LN+ F+ R+ G PF + S++G GE E+ QL
Sbjct: 127 ASGLLEQQARALNKGFLKRMEHGLPFVICKLAASLDGKTALGNGESKWITGEAARRDVQL 186
Query: 254 LQEYDAIILSASST-----KKYSIPASQEPDANQPFRIITVSNHASPIRI 298
+ IL+ + T + ++ A + D +P V PIR+
Sbjct: 187 GRAQSCAILTGADTVLVDDARLNVRAQELADIERP-----VEQWRQPIRV 231
>gi|308048548|ref|YP_003912114.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Ferrimonas balearica DSM 9799]
gi|307630738|gb|ADN75040.1| diaminohydroxyphosphoribosylaminopyrimidine deaminase
;5-amino-6-(5-phosphoribosylamino)uracil reductase
[Ferrimonas balearica DSM 9799]
Length = 373
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 134/230 (58%), Gaps = 17/230 (7%)
Query: 76 DDGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGE 135
DD +M R +ELA + +T PNP VGCV+V+DG++VGEGFH +AG PHAEV ALR AG+
Sbjct: 5 DDARHMARALELARRGQLTTRPNPRVGCVLVRDGEVVGEGFHIRAGGPHAEVHALRAAGD 64
Query: 136 LAEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGID 195
A GATAYV+LEPC+HYGRTPPC++ALI A V +VV M+DPNP V +GL L AGI+
Sbjct: 65 KARGATAYVTLEPCSHYGRTPPCSQALIDAGVARVVAAMVDPNPQVAGRGLAMLEAAGIE 124
Query: 196 VTVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQ 255
G+ + +N F+ R+ TG+PF ++ S++G G+ +G +Q
Sbjct: 125 TQHGLMANEAEAVNPGFMKRMRTGRPFVRVKLAASLDGRTALANGQSKWITGPEARADVQ 184
Query: 256 EY----DAIILSASS---------TKKYSIPASQ----EPDANQPFRIIT 288
DA+I A S + + Q E D QP R++
Sbjct: 185 RLRAISDAVITGADSVLADNPSMNVRHAELGHWQSRISEADLQQPLRVVV 234
>gi|395651520|ref|ZP_10439370.1| riboflavin biosynthesis protein RibD [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 378
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D YM R +ELA + +T PNP VGCVIV+DG+IVGEG+H + G+PHAEV ALR AG+
Sbjct: 12 DAHYMARALELARNGLYTTHPNPRVGCVIVRDGQIVGEGWHVRTGEPHAEVHALRAAGDK 71
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+HYG TPPC +AL+ A V +VV M D NP V +G++RL AGIDV
Sbjct: 72 ARGATAYVTLEPCSHYGHTPPCADALVSAGVARVVAAMQDSNPDVAGRGMQRLAQAGIDV 131
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE 256
GV + + LN+ F+ R+ G PF ++ +S++G GE +G +Q
Sbjct: 132 YSGVLEGEARALNKGFLKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARAAVQR 191
Query: 257 YDA---IILSASST 267
A ++L+ + T
Sbjct: 192 LRAEASVVLTGADT 205
>gi|417792020|ref|ZP_12439432.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii E899]
gi|449309261|ref|YP_007441617.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii SP291]
gi|333953908|gb|EGL71798.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii E899]
gi|449099294|gb|AGE87328.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Cronobacter sakazakii SP291]
Length = 367
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 115/165 (69%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D FYM R ++LA + +T PNP VGCVIVK+G IVGEGFH +AG PHAEV ALR AG+
Sbjct: 3 DEFYMARALKLAGQGRFTTHPNPRVGCVIVKEGVIVGEGFHLRAGGPHAEVHALRMAGDK 62
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
A GATAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGI+V
Sbjct: 63 ARGATAYVTLEPCSHHGRTPPCCDALINAGVARVVAAMQDPNPQVAGRGLYRLQQAGIEV 122
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGE 241
+ G+ + LN+ F+ R+ TG PF L+ S++G GE
Sbjct: 123 SHGLMMSEAEALNKGFLKRMRTGFPFIQLKLGASLDGRTAMASGE 167
>gi|338175453|ref|YP_004652263.1| riboflavin biosynthesis protein RibD [Parachlamydia acanthamoebae
UV-7]
gi|336479811|emb|CCB86409.1| riboflavin biosynthesis protein RibD [Parachlamydia acanthamoebae
UV-7]
Length = 366
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 189/352 (53%), Gaps = 36/352 (10%)
Query: 77 DGFYMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGEL 136
D +M R + LAT+A + PNP VG VIVK GKIVGEGF G+ HAE+ ALR A
Sbjct: 4 DAIFMDRALALATQARLLSPPNPWVGAVIVKQGKIVGEGFTQAPGEAHAEIMALRQALHQ 63
Query: 137 AEGATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDV 196
AE +T YV+LEPC+H+G+TPPC A+I+AK+ VV+ + DP+P V+ +G+++L++AGI V
Sbjct: 64 AENSTLYVTLEPCSHFGKTPPCVNAIIQAKIAHVVIALEDPDPQVSGRGIQKLKEAGISV 123
Query: 197 TVGVEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVL--DQLGEGVA-ESGGYYSQL 253
TVGVE + L E ++ + TG+PF + +S++G V D + + E +Q
Sbjct: 124 TVGVEQQRATELLEPYLFQRKTGRPFCVAKAAISLDGRVAASDHTSKWITNELSRQDAQR 183
Query: 254 LQEYDAIILSASSTKKYSIP----ASQEPDANQ-PFRII-----TVSNHASPIRIPGLSE 303
L+ IL S T KY P S P Q P R++ T+++ +SP+ +
Sbjct: 184 LRAESQAILIGSGTAKYDHPRLTVRSFSPLPYQAPLRVVLDSRGTLTDLSSPL----FNT 239
Query: 304 ESSSKVIVFTDGEITVEPDMG-TKGIETVNLHQ------LNLKAVLDYCYSHGFCSVLVD 356
+ I+ TD T DM + GIE++ L Q ++L V+ G VL++
Sbjct: 240 NLAPTCILTTDRCSTEIRDMWQSHGIESIILSQAKNGEGVDLNEVMKTLGKKGILQVLIE 299
Query: 357 LRGNYGDLEMLLKEGIEQNLLQKIVVEVLPVWNGSDG------GNPHTLLNS 402
LL + + + L+Q + + + P G DG +P TL+N+
Sbjct: 300 GGAT------LLGQFMHEQLIQTLHLYIGPKVLGCDGIPLFGSFSPQTLINA 345
>gi|288555991|ref|YP_003427926.1| riboflavin specific deaminase [Bacillus pseudofirmus OF4]
gi|288547151|gb|ADC51034.1| riboflavin specific deaminase [Bacillus pseudofirmus OF4]
Length = 360
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 165/275 (60%), Gaps = 17/275 (6%)
Query: 80 YMRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEG 139
YM+ + LA + G TSPNPMVG V+VKDG IVG G H KAG+ HAEV AL+ AGE AEG
Sbjct: 6 YMKLALTLAEQTRGQTSPNPMVGSVVVKDGAIVGMGAHLKAGEGHAEVNALKMAGEKAEG 65
Query: 140 ATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVG 199
AT YV+LEPC+HYG+TPPC + +I+ ++K+VVV +DPNP V+ +G++RLRD+GI V VG
Sbjct: 66 ATIYVTLEPCSHYGKTPPCADLIIEKQLKRVVVATVDPNPEVSGRGIKRLRDSGITVDVG 125
Query: 200 VEDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQE--- 256
V + LN F H I T +PF T++ +++G GE +G +
Sbjct: 126 VCEAEAIELNRMFFHFIQTKRPFVTMKTASTLDGKTATVTGESKWITGEEARLDVHRDRH 185
Query: 257 -YDAIILSASSTKKYSIPA--SQEPDANQ-PFRIITVSNHASPIRIPGLSE---ESSSKV 309
+DAI++ + + PA ++ P+ + P RII + H +R+P S+ + ++K
Sbjct: 186 IHDAILVGIGTVLSDN-PALTTRLPNGGRNPIRII-LDRH---LRLPESSQVACDQAAKT 240
Query: 310 IVFTDGEITVEPDMGTK--GIETVNLHQLNLKAVL 342
VFT + E + + G++ + L ++ ++L
Sbjct: 241 WVFTTEHASSEKEEALRMLGVDVIRLRDYSIPSIL 275
>gi|419937136|ref|ZP_14454051.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 576-1]
gi|388398291|gb|EIL59215.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli 576-1]
Length = 361
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 129/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEG---VAESGGYYSQLLQEY 257
++LN+ F+ R+ TG P+ L+ S++G GE + Q L+
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMVSGESQWITSPQARRDVQRLRAQ 180
Query: 258 DAIILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|419916870|ref|ZP_14435154.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli KD2]
gi|388395271|gb|EIL56495.1| bifunctional diaminohydroxyphosphoribosylaminopyrimidine
deaminase/5-amino-6-(5-phosphoribosylamino)uracil
reductase [Escherichia coli KD2]
Length = 361
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 130/197 (65%), Gaps = 3/197 (1%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M R ++LA + +T PNP VGCVIVKDG+IVGEG+H +AG+PHAEV ALR AGE A+GA
Sbjct: 1 MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEKAKGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
TAYV+LEPC+H+GRTPPC +ALI A V +VV M DPNP V +GL RL+ AGIDV+ G+
Sbjct: 61 TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESGGYYSQLLQEYDA- 259
++LN+ F+ R+ TG P+ L+ S++G GE + + +Q A
Sbjct: 121 MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQRQRAQ 180
Query: 260 --IILSASSTKKYSIPA 274
IL++S+T PA
Sbjct: 181 SHAILTSSATVLADDPA 197
>gi|406910998|gb|EKD50885.1| Riboflavin biosynthesis protein RibD [uncultured bacterium]
Length = 365
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 162/293 (55%), Gaps = 23/293 (7%)
Query: 81 MRRCVELATKAVGSTSPNPMVGCVIVKDGKIVGEGFHPKAGQPHAEVFALRDAGELAEGA 140
M ++LA K G SPNP+VGCVIVK+G++VG+G+H K G HAEV AL+ AG A GA
Sbjct: 1 MLMALKLARKGAGRVSPNPLVGCVIVKNGQVVGKGYHKKYGDYHAEVNALKMAGHKARGA 60
Query: 141 TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVVGMLDPNPIVNSKGLERLRDAGIDVTVGV 200
T YV+LEPC HYG+TPPC +A+I A +K+VV+ M DPNP + + + +L+ GI+V VGV
Sbjct: 61 TLYVNLEPCFHYGKTPPCVDAVIAAGIKRVVIAMQDPNPKTDGRSITKLKRHGIEVCVGV 120
Query: 201 EDELCKRLNEAFIHRIVTGKPFATLRYTLSVNGHVLDQLGEGVAESG----GYYSQLLQE 256
+ + LN+ FIH + +P+ ++ S++G + Q G+ +G Y +L E
Sbjct: 121 CAKEARELNQYFIHAMTHKQPYVIVKVAQSLDGMITAQKGQRTQITGKRAVDYVQRLRSE 180
Query: 257 YDAIILSASSTK-KYSIPASQEPDANQPFRIITVSNHASP--IRIPGLS----------E 303
A+++ ++ + + + P QP RII SN + P + + G S
Sbjct: 181 VSAVLVGVNTVRVDDPLLTVRNPKKPQPKRIILDSNLSLPHTVNLFGASGGQVILVCALP 240
Query: 304 ESSSKVIVFTDGEITVEPDMGTKGIETVNLHQLNLKAVLDYCYSHGFCSVLVD 356
KV+ FT + V D+ + L+LK VL Y G SVLV+
Sbjct: 241 ARHKKVLAFTKRGVVVISDVPR------DRQGLDLKYVLKSLYDLGLRSVLVE 287
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,917,949,948
Number of Sequences: 23463169
Number of extensions: 298669465
Number of successful extensions: 717895
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3706
Number of HSP's successfully gapped in prelim test: 3556
Number of HSP's that attempted gapping in prelim test: 708928
Number of HSP's gapped (non-prelim): 7508
length of query: 427
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 282
effective length of database: 8,957,035,862
effective search space: 2525884113084
effective search space used: 2525884113084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)